# terms

id: GO:0046829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the movement of RNA from the cytoplasm into the nucleus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound transport","termid":"GO:0032240"},{"relation_name":"is_a","term_name":"negative regulation of nucleocytoplasmic transport","termid":"GO:0046823"},{"relation_name":"is_a","term_name":"regulation of RNA import into nucleus","termid":"GO:0046828"},{"relation_name":"negatively_regulates","term_name":"RNA import into nucleus","termid":"GO:0006404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA import into nucleus","synonyms":[{"name":"down regulation of RNA import into nucleus","type":"exact"},{"name":"down-regulation of RNA import into nucleus","type":"exact"},{"name":"downregulation of RNA import into nucleus","type":"exact"},{"name":"inhibition of RNA import into nucleus","type":"narrow"},{"name":"negative regulation of RNA import into cell nucleus","type":"exact"},{"name":"negative regulation of RNA transport from cytoplasm to nucleus","type":"exact"},{"name":"negative regulation of RNA-nucleus import","type":"exact"}],"termid":"GO:0046829"}


id: GO:1905925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of invadopodium assembly.","definition_xrefs":["PMID:15684033","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of invadopodium assembly (obsolete GO:1905925)","synonyms":[{"name":"down regulation of invadopodium assembly","type":"exact"},{"name":"down regulation of invadopodium formation","type":"exact"},{"name":"down-regulation of invadopodium assembly","type":"exact"},{"name":"down-regulation of invadopodium formation","type":"exact"},{"name":"downregulation of invadopodium assembly","type":"exact"},{"name":"downregulation of invadopodium formation","type":"exact"},{"name":"inhibition of invadopodium assembly","type":"narrow"},{"name":"inhibition of invadopodium formation","type":"narrow"},{"name":"negative regulation of invadopodium formation","type":"exact"}],"termid":"GO:1905925"}


id: PBO:0003652
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Random Septum Postioning","termid":"PBO:0003652"}


id: PBO:0083723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential 100kDa subunit of the exocyst complex; the exocyst mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane prior to SNARE-mediated fusion","termid":"PBO:0083723"}


id: PR:O60119
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scs2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle-associated membrane protein-associated protein C16G5.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.05c","synonyms":[{"name":"Spom972h-scs2","type":"exact"},{"name":"VAMP-associated protein C16G5.05c (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"VAP homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60119"}


id: MONDO:0100372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any peroxisomal single enzyme/protein defect that disrupts peroxisomal transport.","definition_xrefs":["PMID:17055078","MONDO:patterns/specific_disease_by_disrupted_process","PMID:26611709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal single enzyme/protein defect","termid":"MONDO:0100257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"disorder of peroxisomal transporter","synonyms":[{"name":"disorder of peroxisomal transporter defect","type":"exact"}],"termid":"MONDO:0100372","xrefs":{"Monarch":{"xref_id":"0100372"}}}


id: PBO:0090432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH kinase Pos5","termid":"PBO:0090432"}


id: MONDO:0003546
data:
  {"annotated_genes":["SJAG_01114","SJAG_04765","SJAG_04522","SJAG_02278"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85705,85706,85708,85707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011444"}]},"cv_name":"mondo","definition":"A disease involving the oculomotor nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02278":null,"SJAG_04522":null,"SJAG_04765":null},"genotype_count":0,"is_obsolete":false,"name":"third cranial nerve disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0271353","DOID:562","MESH:D015840","NCIT:C27598","SCTID:60750009","MEDGEN:78766"],"synonyms":[{"name":"disease of oculomotor nerve","type":"exact"},{"name":"disease or disorder of oculomotor nerve","type":"exact"},{"name":"disorder of oculomotor nerve","type":"exact"},{"name":"oculomotor nerve disease","type":"exact"},{"name":"oculomotor nerve disease or disorder","type":"exact"},{"name":"oculomotor nerve disorder","type":"exact"}],"termid":"MONDO:0003546","terms_by_termid":{"MONDO:0011444":null},"xrefs":{"Monarch":{"xref_id":"0003546"}}}


id: PBO:0048797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha q","termid":"PBO:0048797"}


id: GO:0030107
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I molecule of the HLA-A subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["GOC:mah","PMID:9368779","PMID:11929129","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class I receptor activity","termid":"GO:0032396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"HLA-A specific inhibitory MHC class I receptor activity","termid":"GO:0030107"}


id: PBO:0089593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRC complex-Argonaute linker protein Stc1","termid":"PBO:0089593"}


id: MONDO:1010702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyruvate kinase deficiency of erythrocyte that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate kinase deficiency of erythrocyte, non-human animal","termid":"MONDO:1010099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase deficiency of erythrocyte, domestic cat","secondary_identifiers":["OMIA:000844-9685"],"termid":"MONDO:1010702","xrefs":{"Monarch":{"xref_id":"1010702"}}}


id: PBO:0042229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 1","termid":"PBO:0042229"}


id: PBO:0027388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_salt_stress","termid":"PBO:0027388"}


id: GO:0051427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor for a hormone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"hormone receptor binding","termid":"GO:0051427"}


id: PBO:0089800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pig-U, Gab1","termid":"PBO:0089800"}


id: GO:0045625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 1 cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T-helper 1 type immune response","termid":"GO:0002825"},{"relation_name":"is_a","term_name":"regulation of T-helper cell differentiation","termid":"GO:0045622"},{"relation_name":"regulates","term_name":"T-helper 1 cell differentiation","termid":"GO:0045063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 1 cell differentiation","synonyms":[{"name":"regulation of T-helper 1 cell development","type":"related"}],"termid":"GO:0045625"}


id: PBO:0047088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 136 member G, pseudogene","termid":"PBO:0047088"}


id: GO:0004291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins with broad specificity for peptide bonds, and a preference for a large uncharged residue in P1. Hydrolyzes peptide amides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete subtilisin activity (obsolete GO:0004291)","synonyms":[{"name":"ALK-enzyme","type":"related"},{"name":"SP 266","type":"related"},{"name":"alcalase 0.6L","type":"related"},{"name":"alcalase 2.5L","type":"related"},{"name":"alcalase activity","type":"related"},{"name":"bacillopeptidase A","type":"related"},{"name":"bacillopeptidase B","type":"related"},{"name":"bacillus subtilis alkaline proteinase activity","type":"related"},{"name":"bacillus subtilis alkaline proteinase bioprase activity","type":"related"},{"name":"bioprase AL 15","type":"related"},{"name":"bioprase APL 30","type":"related"},{"name":"colistinase activity","type":"related"},{"name":"esperase activity","type":"related"},{"name":"genenase I","type":"related"},{"name":"kazusase activity","type":"related"},{"name":"maxatase activity","type":"related"},{"name":"opticlean","type":"related"},{"name":"orientase 10B","type":"related"},{"name":"protease S","type":"related"},{"name":"protease VIII","type":"related"},{"name":"protease XXVII","type":"related"},{"name":"protin A 3L","type":"related"},{"name":"savinase 16.0L","type":"related"},{"name":"savinase 32.0 L EX","type":"related"},{"name":"savinase 4.0T","type":"related"},{"name":"savinase 8.0L","type":"related"},{"name":"savinase activity","type":"related"},{"name":"subtilisin BL","type":"related"},{"name":"subtilisin DY","type":"related"},{"name":"subtilisin E","type":"related"},{"name":"subtilisin GX","type":"related"},{"name":"subtilisin J","type":"related"},{"name":"subtilisin S41","type":"related"},{"name":"subtilisin activity","type":"exact"},{"name":"subtilisin sendai","type":"related"},{"name":"subtilopeptidase activity","type":"related"},{"name":"superase activity","type":"related"},{"name":"thermoase","type":"broad"},{"name":"thermoase PC 10","type":"related"}],"termid":"GO:0004291"}


id: MONDO:0020295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aberrant drainage of one or more of the pulmonary veins which causes the return of oxygen-rich blood to the right atrium.","definition_xrefs":["NCIT:C110942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital pulmonary veins anomaly","secondary_identifiers":["Orphanet:98729","SCTID:111322000","GARD:19559"],"synonyms":[{"name":"congenital anomaly of pulmonary veins","type":"exact"},{"name":"pulmonary vein abnormality","type":"related"}],"termid":"MONDO:0020295","xrefs":{"Monarch":{"xref_id":"0020295"}}}


id: FYPO:0000809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion organization is abnormal. Mitochondrion organization results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrion, and includes mitochondrial morphogenesis and distribution, and replication of the mitochondrial genome, as well as synthesis of new mitochondrial components.","definition_xrefs":["GO:0007005","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitochondrion organization","synonyms":[{"name":"abnormal mitochondrion organisation","type":"exact"},{"name":"abnormal mitochondrion organization during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrion organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000809"}


id: GO:0005357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose + H+ = glucose + H+. This activity is constitutive and therefore always present, regardless of demand. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete constitutive glucose:proton symporter activity (obsolete GO:0005357)","synonyms":[{"name":"constitutive hydrogen/glucose transporter activity","type":"broad"},{"name":"constitutive hydrogen:glucose symporter activity","type":"exact"},{"name":"constitutive hydrogen:glucose transporter activity","type":"broad"}],"termid":"GO:0005357"}


id: PBO:0084867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S10 ribosomal protein; essential for viability, unlike most other mitoribosomal proteins","termid":"PBO:0084867"}


id: GO:0045775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of beta 2 integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta 2 integrin biosynthetic process","termid":"GO:0045115"},{"relation_name":"is_a","term_name":"positive regulation of integrin biosynthetic process","termid":"GO:0045726"},{"relation_name":"positively_regulates","term_name":"beta 2 integrin biosynthetic process","termid":"GO:0045114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of beta 2 integrin biosynthetic process","synonyms":[{"name":"activation of beta 2 integrin biosynthetic process","type":"narrow"},{"name":"positive regulation of beta 2 integrin anabolism","type":"exact"},{"name":"positive regulation of beta 2 integrin biosynthesis","type":"exact"},{"name":"positive regulation of beta 2 integrin formation","type":"exact"},{"name":"positive regulation of beta 2 integrin synthesis","type":"exact"},{"name":"stimulation of beta 2 integrin biosynthetic process","type":"narrow"},{"name":"up regulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"up-regulation of beta 2 integrin biosynthetic process","type":"exact"},{"name":"upregulation of beta 2 integrin biosynthetic process","type":"exact"}],"termid":"GO:0045775"}


id: MONDO:0021350
data:
  {"annotated_genes":["SJAG_04394","SJAG_04502","SJAG_01410","SJAG_03720","SJAG_02460","SJAG_00757","SJAG_04206","SJAG_04114","SJAG_00229","SJAG_03689","SJAG_00079","SJAG_03453","SJAG_02426"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86530,87653,86528,87649,86532,87650,86531,87651,87652,86529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016419"},{"annotations":[87668,87136,87137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[86682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the thoracic segment of trunk.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00079":null,"SJAG_00229":null,"SJAG_00757":null,"SJAG_01410":null,"SJAG_02426":null,"SJAG_02460":null,"SJAG_03453":null,"SJAG_03689":null,"SJAG_03720":null,"SJAG_04114":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04502":null},"genotype_count":0,"is_obsolete":false,"name":"neoplasm of thorax","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C3406","UMLS:C0039981","SCTID:255058005","MEDGEN:11793","ICD10CM:C30-C39","ICD9:239.89"],"synonyms":[{"name":"neoplasm of the thorax","type":"exact"},{"name":"neoplasm of thoracic segment of trunk","type":"exact"},{"name":"thoracic neoplasm","type":"exact"},{"name":"thoracic segment of trunk neoplasm","type":"exact"},{"name":"thoracic segment of trunk neoplasm (disease)","type":"exact"},{"name":"thoracic segment of trunk tumor","type":"exact"},{"name":"thoracic segment of trunk tumour","type":"exact"},{"name":"thoracic tumor","type":"exact"},{"name":"thoracic tumour","type":"exact"},{"name":"tumor of the thorax","type":"exact"},{"name":"tumor of thoracic segment of trunk","type":"exact"},{"name":"tumor of thorax","type":"exact"},{"name":"tumour of the thorax","type":"exact"},{"name":"tumour of thoracic segment of trunk","type":"exact"},{"name":"tumour of thorax","type":"exact"}],"termid":"MONDO:0021350","terms_by_termid":{"MONDO:0008903":null,"MONDO:0011014":null,"MONDO:0016419":null},"xrefs":{"Monarch":{"xref_id":"0021350"}}}


id: PBO:0026750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_nitrogen_starvation","termid":"PBO:0026750"}


id: PBO:0042475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 2","termid":"PBO:0042475"}


id: SO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL8 RNA leader sequence to the 5' end of an mRNA. SL8 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL8_acceptor_site","synonyms":[{"name":"SL8 acceptor site","type":"exact"}],"termid":"SO:0001753"}


id: GO:0052746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing one or more phosphate groups into inositol. Inositol is the cyclic alcohol 1,2,3,4,5,6-cyclohexanehexol, which is widely distributed in nature and acts as a growth factor in animals and microorganisms.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol phosphorylation (obsolete GO:0052746)","synonyms":[{"name":"inositol and derivative phosphorylation","type":"related"},{"name":"myo-inositol and derivative phosphorylation","type":"related"},{"name":"myo-inositol phosphorylation","type":"narrow"}],"termid":"GO:0052746"}


id: FYPO:0001874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the preferential localization of a protein to either the old or new spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal asymmetric protein localization, with protein localized to both mitotic spindle pole bodies","synonyms":[{"name":"abnormal asymmetric protein localisation to old or new mitotic spindle pole body","type":"exact"},{"name":"abnormal asymmetric protein localization to old or new mitotic SPB","type":"exact"},{"name":"abnormal asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"},{"name":"abnormal asymmetric protein localization to old or new mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"abnormal asymmetric protein localization to old or new mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"abnormal occurrence of normally asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0001874"}


id: PBO:0041166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG2 divergent transcript","termid":"PBO:0041166"}


id: GO:0003081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which renin-angiotensin modulates the force with which blood passes through the circulatory system.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by renin-angiotensin","synonyms":[{"name":"blood pressure regulation by renin-angiotensin","type":"exact"}],"termid":"GO:0003081"}


id: MONDO:0010320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the OFD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 23","secondary_identifiers":["MEDGEN:238456","DOID:0110412","OMIM:300424","UMLS:C1419610","GARD:10391","ICD10CM:H35.5"],"synonyms":[{"name":"OFD1 retinitis pigmentosa","type":"exact"},{"name":"RP 23","type":"related"},{"name":"RP23","type":"exact"},{"name":"retinitis pigmentosa 23","type":"exact"},{"name":"retinitis pigmentosa 23, X-linked recessive","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in OFD1","type":"exact"},{"name":"retinitis pigmentosa type 23","type":"exact"}],"termid":"MONDO:0010320","xrefs":{"Monarch":{"xref_id":"0010320"}}}


id: GO:0097354
data:
  {"annotated_genes":["SJAG_02583","SJAG_03810"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61521,68209],"is_not":false,"summary":null,"term":"GO:0097354"}]},"cv_name":"biological_process","definition":"The covalent attachment of a prenyl group to a molecule; geranyl, farnesyl, or geranylgeranyl groups may be added.","definition_xrefs":["PMID:21351751","PMID:22123822","PMID:22660767","PMID:22642693","PMID:18029206","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_03810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prenylation","references_by_uniquename":{"GO_REF:0000104":null},"termid":"GO:0097354","terms_by_termid":{"GO:0097354":null}}


id: PBO:0046996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 89 member A","termid":"PBO:0046996"}


id: MONDO:0017624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial primary hypomagnesemia with hypercalciuria and nephrocalcinosis (FHHNC) is a form of familial primary hypomagnesemia (FPH), characterized by renal magnesium (Mg) and calcium (Ca) wasting, nephrocalcinosis, kidney failure and, in some cases, severe ocular impairment. Two subtypes of FHHNC are described: FHHNC with severe ocular involvement (FHHNCOI) and without severe ocular involvement (FHHN).","definition_xrefs":["Orphanet:306516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary hypomagnesemia","termid":"MONDO:0018100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"familial primary hypomagnesemia with hypercalciuria and nephrocalcinosis","secondary_identifiers":["GARD:21254","UMLS:C5679977","MEDGEN:1843047"],"synonyms":[{"name":"FHHNC","type":"exact"},{"name":"Michellis-Castrillo syndrome","type":"exact"}],"termid":"MONDO:0017624","xrefs":{"Monarch":{"xref_id":"0017624"}}}


id: MONDO:0016448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudoxanthoma elasticum-like papillary dermal elastolysis (PXE-PDE) is a rare, acquired, idiopathic dermal tissue disorder characterized by numerous, asymptomatic, 2-3 mm, yellowish, non-follicular papules that tend to converge into cobblestone-like plaques which are distributed symmetrically over the posterior neck, supraclavicular region, axillae, and sometimes abdomen. Unlike PXE, these skin lesions show select elimination (absence or marked loss) of elastic fibers in the papillary dermis and there is no systemic involvement.","definition_xrefs":["Orphanet:228293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pseudoxanthoma elasticum-like papillary dermal elastolysis","secondary_identifiers":["icd11.foundation:704601885","GARD:20588","MEDGEN:1638395","UMLS:C4049455","SCTID:764105002"],"synonyms":[{"name":"PXE-PDE","type":"exact"},{"name":"PXE-like papillary dermal elastolysis","type":"exact"}],"termid":"MONDO:0016448","xrefs":{"Monarch":{"xref_id":"0016448"}}}


id: MONDO:0009782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ophthalmoplegia totalis with ptosis and miosis","secondary_identifiers":["MEDGEN:342471","UMLS:C1850314","MESH:C564927","OMIM:258400"],"synonyms":[{"name":"ophthalmoplegia totalis with ptosis and miosis","type":"exact"}],"termid":"MONDO:0009782","xrefs":{"Monarch":{"xref_id":"0009782"}}}


id: PBO:0076859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 9","termid":"PBO:0076859"}


id: GO:0018282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a cluster of several metal atoms, including iron, nickel, molybdenum, vanadium, or copper, with one or more bridging (mu-bond) sulfur atoms; amino acids residues in proteins that may ligate the metal sulfur cluster are cysteine, histidine, aspartate, glutamate, serine and cysteine persulfide.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"part_of","term_name":"metallo-sulfur cluster assembly","termid":"GO:0031163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"metal incorporation into metallo-sulfur cluster","synonyms":[{"name":"metal incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018282"}


id: PBO:0027245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_polyadenylated_5.8S_rRNA_level","termid":"PBO:0027245"}


id: PBO:0041869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calsequestrin 1","termid":"PBO:0041869"}


id: PBO:0091158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetolactate synthase regulatory subunit Ilv6","termid":"PBO:0091158"}


id: PBO:0053868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1143","termid":"PBO:0053868"}


id: GO:0021701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Golgi cell. Differentiation includes the processes involved in commitment of a neuroblast to a Golgi cell fate. A cerebellar Golgi cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:cls","GOC:jid","PMID:15157725","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"},{"relation_name":"part_of","term_name":"cerebellar granular layer formation","termid":"GO:0021684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Golgi cell differentiation","termid":"GO:0021701"}


id: MONDO:0020521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, arthrochalasia type","termid":"MONDO:0007525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome type 7A","secondary_identifiers":["MEDGEN:854083","icd11.foundation:165998215","UMLS:C3508773","Orphanet:99875"],"synonyms":[{"name":"EDS VIIA","type":"exact"}],"termid":"MONDO:0020521","xrefs":{"Monarch":{"xref_id":"0020521"}}}


id: GO:0016169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to bacteriochlorophyll c, a chlorophyll of photosynthetic bacteria, for example green sulfur bacteria.","definition_xrefs":["ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacteriochlorophyll binding","termid":"GO:0042314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"bacteriochlorophyll c binding","termid":"GO:0016169"}


id: SO:0002287
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Dictyostelium intermediate repeat sequence (DIRS) retrotransposons are members of the YR_retrotransposon (SO:0002286) superfamily with the following protein domains: RT, RH, YR, and MT. RT is a reverse transcriptase. RH is RNAse H. YR is tyrosine recombinase. MT is DNA N-6-adenine-methyltransferase.","definition_xrefs":["PMID:24086727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"YR_retrotransposon","termid":"SO:0002286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIRS_YR_retrotransposon","synonyms":[{"name":"DIRS YR retrotransposon","type":"exact"},{"name":"DIRS retrotransposon","type":"exact"},{"name":"RYD retrotransposon","type":"exact"}],"termid":"SO:0002287"}


id: FYPO:0002036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an endodeoxyribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"abnormal nuclease activity","termid":"FYPO:0003163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000002","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal endodeoxyribonuclease activity","termid":"FYPO:0002036"}


id: MOD:00137
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue into L-3-phenyllactic acid.","definition_xrefs":["Unimod:7#F","PubMed:1973541","RESID:AA0128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3-phenyllactic acid","synonyms":[{"name":"(2S)-2-hydroxy-3-phenylpropanoic acid","type":"exact"},{"name":"Deamidated","type":"related"},{"name":"Deamidation","type":"related"},{"name":"L-3-phenyllactic acid","type":"exact"},{"name":"MOD_RES 3-phenyllactic acid","type":"exact"}],"termid":"MOD:00137"}


id: GO:0019786
data:
  {"annotated_genes":["SJAG_01283"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77315],"is_not":false,"summary":null,"term":"GO:0019786"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [protein]-C-terminal L-amino acid-glycyl-phosphatidylethanolamide + H2O = [protein]-C-terminal L-amino acid-glycine + a 1,2-diacyl-sn-glycero-3-phosphoethanolamine. An example of this reaction is the removal of ATG8 from membranes to which it is covalently linked to a phosphatidylethanolamid via its terminal glycine residue.","definition_xrefs":["PMID:2882172","PMID:28330855","PMID:22240591","PMID:28901328","PMID:22652539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"protein-phosphatidylethanolamide deconjugating activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"APG8-PE hydrolase","type":"related"},{"name":"APG8-specific protease activity","type":"narrow"},{"name":"ATG8-PE deconjugation activity","type":"narrow"},{"name":"ATG8-PE hydrolase activity","type":"narrow"},{"name":"Atg8-specific peptidase activity","type":"narrow"},{"name":"Atg8-specific protease activity","type":"exact"}],"termid":"GO:0019786","terms_by_termid":{"GO:0019786":null}}


id: PBO:0060531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 8B (putative, gene/pseudogene)","termid":"PBO:0060531"}


id: MONDO:0008884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome is characterized by congenital anodontia, a small maxilla, short stature with shortened metacarpals and metatarsals, sparse hair, albinoidism and multiple ocular anomalies. It has been described in three siblings (one brother and two sisters). Transmission is autosomal recessive.","definition_xrefs":["Orphanet:2713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"oculoosteocutaneous syndrome","secondary_identifiers":["SCTID:722061006","GARD:992","UMLS:C1859385","MEDGEN:347867","MESH:C565893","OMIM:211370"],"synonyms":[{"name":"BRACHYMETAPODY-anodontia-hypotrichosis-ALBINOIDISM","type":"exact"},{"name":"anodontia-hypotrichosis syndrome","type":"exact"},{"name":"brachymetapody anodontia hypotrichosis albinoidism","type":"exact"},{"name":"oculoosteocutaneous syndrome","type":"exact"}],"termid":"MONDO:0008884","xrefs":{"Monarch":{"xref_id":"0008884"}}}


id: PBO:0067313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 399, pseudogene","termid":"PBO:0067313"}


id: PBO:0030275
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_targeting_to_vacuole","termid":"PBO:0030275"}


id: MONDO:0011573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 7, susceptibility to","secondary_identifiers":["OMIM:605606","MEDGEN:343057","UMLS:C1854124","DOID:0111279"],"synonyms":[{"name":"PSORS7","type":"exact"},{"name":"psoriasis 7, susceptibility to","type":"exact"},{"name":"psoriasis susceptibility 7","type":"exact"},{"name":"psoriasis, protection against","type":"exact"}],"termid":"MONDO:0011573","xrefs":{"Monarch":{"xref_id":"0011573"}}}


id: PBO:0080266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 29 pseudogene","termid":"PBO:0080266"}


id: PBO:0078797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 16-4","termid":"PBO:0078797"}


id: PBO:0085723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the control of meiotic nuclear division; involved in the coordination of meiosis with spore formation; subunit of the leading edge protein (LEP) complex (Ssp1-Ady3-Don1-Irc10) that forms a ring-like structure at the leading edge of the prospore membrane during meiosis II; required for assembly of the leading edge coat and both prospore membrane shaping and organization; transcription is induced midway through meiosis","termid":"PBO:0085723"}


id: PBO:0062881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTX2 pseudogene 2","termid":"PBO:0062881"}


id: MONDO:0020647
data:
  {"annotated_genes":["SJAG_01302"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86698],"is_not":false,"summary":null,"term":"MONDO:0020647"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01302":null},"genotype_count":0,"is_obsolete":false,"name":"microcephaly, facial dysmorphism, renal agenesis, and ambiguous genitalia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4748348","OMIM:618142","MEDGEN:1648412"],"synonyms":[{"name":"MFRG","type":"exact"},{"name":"microcephaly, facial dysmorphism, renal agenesis, and ambiguous genitalia syndrome","type":"exact"}],"termid":"MONDO:0020647","terms_by_termid":{"MONDO:0020647":null},"xrefs":{"Monarch":{"xref_id":"0020647"}}}


id: PBO:0040714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6B transcription repressor","termid":"PBO:0040714"}


id: MONDO:0800467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dyskeratosis congenita caused by impaired telomere maintenance resulting in short or very short telomeres. The phenotypic spectrum includes individuals with classic dyskeratosis congenita (DC) as well as those with very short telomeres and an isolated physical finding. Classic DC is characterized by a triad of dysplastic nails, lacy reticular pigmentation of the upper chest and/or neck, and oral leukoplakia, although this may not be present in all individuals. People with DC/TBD are at increased risk for progressive bone marrow failure (BMF), myelodysplastic syndrome or acute myelogenous leukemia, solid tumors (usually squamous cell carcinoma of the head/neck or anogenital cancer), and pulmonary fibrosis. Other findings can include eye abnormalities (epiphora, blepharitis, sparse eyelashes, ectropion, entropion, trichiasis), taurodontism, liver disease, gastrointestinal telangiectasias, and avascular necrosis of the hips or shoulders. Additional findings include cerebellar hypoplasia (Hoyeraal Hreidarsson syndrome) and bilateral exudative retinopathy and intracranial calcifications (Revesz syndrome and Coats plus syndrome). Onset and progression of manifestations of DC/TBD vary: at the mild end of the spectrum are those who have only minimal physical findings with normal bone marrow function, and at the severe end are those who have the diagnostic triad and early-onset BMF.","definition_xrefs":["PMID:20301779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita and related telomere biology disorder","synonyms":[{"name":"dyskeratosis congenita and related telomere biology disorder","type":"exact"}],"termid":"MONDO:0800467","xrefs":{"Monarch":{"xref_id":"0800467"}}}


id: MONDO:1012102
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic hepatic fibrosis, non-human animal","termid":"MONDO:1011775"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic hepatic fibrosis, dog","secondary_identifiers":["OMIA:000454-9615"],"termid":"MONDO:1012102","xrefs":{"Monarch":{"xref_id":"1012102"}}}


id: PBO:0074768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3B-1","termid":"PBO:0074768"}


id: PBO:0047464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCRL4 pseudogene 1","termid":"PBO:0047464"}


id: SO:0000508
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one D-gene, one DJ-gene, and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_DJ_J_cluster","synonyms":[{"name":"D DJ J cluster","type":"exact"},{"name":"D-(DJ)-J-CLUSTER","type":"exact"}],"termid":"SO:0000508"}


id: SOFP:citation
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citation","termid":"SOFP:citation"}


id: MONDO:0004748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the lip.","direct_ancestors":[{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lip disorder","secondary_identifiers":["DOID:9297","MESH:D008047","MEDGEN:44166","UMLS:C0023760","NCIT:C26818","ICD9:528.5","SCTID:90678009"],"synonyms":[{"name":"disease of lip","type":"exact"},{"name":"disease of lips","type":"exact"},{"name":"disease or disorder of lip","type":"exact"},{"name":"disorder of lip","type":"exact"},{"name":"lip disease","type":"exact"},{"name":"lip disease or disorder","type":"exact"},{"name":"lip disorder","type":"exact"}],"termid":"MONDO:0004748","xrefs":{"Monarch":{"xref_id":"0004748"}}}


id: PBO:0006173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_anatomical_entity","termid":"PBO:0006173"}


id: PBO:0044564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAZ associated protein 1","termid":"PBO:0044564"}


id: CHEBI:63041
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A manganese coordination entity in which manganese(II) is coordinated to two chloride ions.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese(II) chloride","termid":"CHEBI:63041"}


id: GO:0032238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of adenosine, adenine riboside, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"adenosine transport","termid":"GO:0032238"}


id: MONDO:0014652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any exudative vitreoretinopathy in which the cause of the disease is a mutation in the ZNF408 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exudative vitreoretinopathy","termid":"MONDO:0019516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"exudative vitreoretinopathy 6","secondary_identifiers":["UMLS:C4225316","MEDGEN:902559","OMIM:616468","DOID:0111410","GARD:16118"],"synonyms":[{"name":"EVR6","type":"related"},{"name":"ZNF408 exudative vitreoretinopathy","type":"exact"},{"name":"exudative vitreoretinopathy 6","type":"exact"},{"name":"exudative vitreoretinopathy caused by mutation in ZNF408","type":"exact"},{"name":"exudative vitreoretinopathy type 6","type":"exact"}],"termid":"MONDO:0014652","xrefs":{"Monarch":{"xref_id":"0014652"}}}


id: PBO:0061572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin 4","termid":"PBO:0061572"}


id: GO:0007178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses serine/threonine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-linked receptor protein signaling pathway","termid":"GO:0007167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell surface receptor protein serine/threonine kinase signaling pathway","synonyms":[{"name":"transmembrane receptor protein serine/threonine kinase signaling pathway","type":"broad"},{"name":"transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0007178"}


id: GO:0070856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a light chain of a myosin VI complex.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin light chain binding","termid":"GO:0032027"},{"relation_name":"is_a","term_name":"myosin VI binding","termid":"GO:0070853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0008092","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"myosin VI light chain binding","termid":"GO:0070856"}


id: PR:O94479
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1919.12c gene.","definition_xrefs":["UniProtKB:O94479","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane protease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.12c","synonyms":[{"name":"FXNA-related family protease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1919.12c","type":"exact"}],"termid":"PR:O94479"}


id: PBO:0078752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 13 homolog","termid":"PBO:0078752"}


id: PBO:0065380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 8","termid":"PBO:0065380"}


id: GO:0050830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to Gram-positive bacterium","synonyms":[{"name":"Gram-positive antibacterial peptide activity","type":"related"},{"name":"defence response to Gram-positive bacteria","type":"exact"},{"name":"defence response to Gram-positive bacterium","type":"exact"},{"name":"defense response to Gram-positive bacteria","type":"exact"}],"termid":"GO:0050830"}


id: MONDO:0859526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 109 with lymphoproliferation","secondary_identifiers":["UMLS:C5830346","OMIM:620282","MEDGEN:1840982"],"termid":"MONDO:0859526","xrefs":{"Monarch":{"xref_id":"0859526"}}}


id: PBO:0073580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa like 2A","termid":"PBO:0073580"}


id: MONDO:0004711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete amyloidosis (obsolete MONDO:0004711)","synonyms":[{"name":"obsolete amyloidosis (disease)","type":"exact"}],"termid":"MONDO:0004711","xrefs":{"Monarch":{"xref_id":"0004711"}}}


id: PBO:0030649
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_methylamine_level","termid":"PBO:0030649"}


id: PBO:0083095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage-dependent checkpoint protein; required for cell-cycle arrest in G1/S, intra-S, and G2/M, plays a role in postreplication repair (PRR) pathway; transmits checkpoint signal by activating Rad53p and Chk1p; protects double-strand breaks from premature resection; multiple cyclin dependent kinase consensus sites and the C-terminal BRCT domain contribute to DNA damage checkpoint activation; Rad9p Chk1 Activating Domain (CAD) is phosphorylated at multiple sites by Cdc28p/Clb2p","termid":"PBO:0083095"}


id: PBO:0050638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 3, pseudogene","termid":"PBO:0050638"}


id: GO:0043855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a cyclic nucleotide has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"cyclic nucleotide-activated monoatomic ion channel activity","synonyms":[{"name":"cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"cyclic nucleotide-gated ion channel activity","type":"broad"},{"name":"cyclic nucleotide-gated monoatomic ion channel activity","type":"exact"}],"termid":"GO:0043855"}


id: MONDO:0011100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, retinitis pigmentosa, and sutural cataract","secondary_identifiers":["MESH:C563296","UMLS:C1832214","MEDGEN:316936","OMIM:601537"],"synonyms":[{"name":"microcephaly, retinitis pigmentosa, and sutural cataract","type":"exact"}],"termid":"MONDO:0011100","xrefs":{"Monarch":{"xref_id":"0011100"}}}


id: PBO:0045129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dmx like 2","termid":"PBO:0045129"}


id: FYPO:0002777
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the sumoylation of one or more specific proteins, or of specific protein sites, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein sumoylation during vegetative growth","synonyms":[{"name":"abnormal protein sumolation during vegetative growth","type":"exact"},{"name":"abnormal protein sumoylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002777"}


id: PBO:0111379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex, chromodomain subunit Alp13/Eaf3","termid":"PBO:0111379"}


id: PBO:0076342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYT9 antisense RNA 1","termid":"PBO:0076342"}


id: PATO:0001746
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation exposure quality inhering in a tissue by virtue of the relation between the absorbed dose to the effective biological damage of the radiation to that tissue.","definition_xrefs":["arpansa:arpansa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation exposure","termid":"PATO:0001744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation equivalent dose","termid":"PATO:0001746"}


id: GO:0060250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of an internal steady state within the germ-line stem-cell niche. This includes control of cellular proliferation and death and control of metabolic function that allows the niche to continue to function. A gem-line stem-cell niche is an anatomical structure that regulates how germ-line stem-cells are used and saves them from depletion.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure homeostasis","termid":"GO:0060249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line stem-cell niche homeostasis","synonyms":[{"name":"germ-line stem-cell niche maintenance","type":"exact"},{"name":"maintenance of germ line stem cell niche","type":"exact"},{"name":"maintenance of germ line stem-cell niche","type":"exact"},{"name":"maintenance of germ-line stem cell niche","type":"exact"},{"name":"maintenance of germ-line stem-cell niche","type":"exact"}],"termid":"GO:0060250"}


id: GO:0002736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of plasmacytoid dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell cytokine production","termid":"GO:0002730"},{"relation_name":"regulates","term_name":"plasmacytoid dendritic cell cytokine production","termid":"GO:0002373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of plasmacytoid dendritic cell cytokine production","termid":"GO:0002736"}


id: PBO:0091567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA, LTR associated","termid":"PBO:0091567"}


id: PBO:0069352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 612, pseudogene","termid":"PBO:0069352"}


id: PBO:0018054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Slh1, human ASCC3 ortholog (predicted)","termid":"PBO:0018054"}


id: PBO:0002908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein","termid":"PBO:0002908"}


id: MONDO:0003976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type AB thymoma which is characterized by an aggressive clinical course (capsular invasion, infiltration of the surrounding tissues) and can metastasize.","definition_xrefs":["NCIT:C6886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymic carcinoma","termid":"MONDO:0006451"},{"relation_name":"is_a","term_name":"thymoma type AB","termid":"MONDO:0016975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"malignant type AB thymoma","secondary_identifiers":["ICDO:8582/3","UMLS:C1266093","DOID:6723","MEDGEN:224760"],"synonyms":[{"name":"malignant thymoma type AB","type":"exact"},{"name":"malignant type AB thymoma","type":"exact"},{"name":"thymoma type AB, malignant","type":"exact"},{"name":"thymoma, mixed type, malignant","type":"exact"}],"termid":"MONDO:0003976","xrefs":{"Monarch":{"xref_id":"0003976"}}}


id: PBO:0050097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 7","termid":"PBO:0050097"}


id: FYPO:0000884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","termid":"FYPO:0000865"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000884"}


id: PBO:0043361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLSTN2 antisense RNA 1","termid":"PBO:0043361"}


id: PBO:0066394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor accessory protein 4","termid":"PBO:0066394"}


id: GO:0043534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an endothelial cell into the extracellular matrix in order to form new blood vessels during angiogenesis.","definition_xrefs":["PMID:11166264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell migration","termid":"GO:0043542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell migration","termid":"GO:0043534"}


id: GO:0005134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-2 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-2 receptor binding","synonyms":[{"name":"IL-2","type":"narrow"},{"name":"interleukin-2 receptor ligand","type":"narrow"}],"termid":"GO:0005134"}


id: GO:1900383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic plasticity, the ability of synapses to change as circumstances require, via receptor localization to the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell. Processes may include receptor transport to, and/or maintenance at, the synapse.","definition_xrefs":["GOC:kmv","PMID:22464329","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"regulation of synaptic plasticity by receptor localization to synapse","synonyms":[{"name":"regulation of synaptic plasticity by receptor localisation to synapse","type":"exact"}],"termid":"GO:1900383"}


id: PBO:0058057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4278","termid":"PBO:0058057"}


id: PBO:0082630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of cytosolic iron-sulfur protein assembly (CIA) machinery; acts at a late step of Fe-S cluster assembly; forms the CIA targeting complex with Cia1p and Cia2p that directs Fe-S cluster incorporation and maturation of a subset of cytosolic and nuclear proteins involved in methionine biosynthesis, DNA replication and repair, transcription, and telomere maintenance; ortholog of human MMS19","termid":"PBO:0082630"}


id: PBO:0091339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious, TSS is downstream of MET, relates to 5'UTR of adjacent gene","termid":"PBO:0091339"}


id: PBO:0111329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome bigenesis rRNA methyltransferase Spb1","termid":"PBO:0111329"}


id: MONDO:0006012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lung parenchyma that is caused by a viral infection.","definition_xrefs":["MESH:D011024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumonia","termid":"MONDO:0005249"},{"relation_name":"is_a","term_name":"viral respiratory tract infection","termid":"MONDO:0024352"},{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral pneumonia","secondary_identifiers":["EFO:0007541","SCTID:75570004","ICD9:480.8","DOID:10533","icd11.foundation:1024154490","ICD9:480","ICD9:480.9","MEDGEN:45974","UMLS:C0032310"],"synonyms":[{"name":"Viruses caused pneumonia","type":"exact"},{"name":"Viruses pneumonia","type":"exact"}],"termid":"MONDO:0006012","xrefs":{"Monarch":{"xref_id":"0006012"}}}


id: GO:0102484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: esculetin + UDP-alpha-D-glucose(2-) = esculin + UDP(3-) + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete esculetin glucosyltransferase activity (obsolete GO:0102484)","termid":"GO:0102484"}


id: GO:0047755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-threo-isocitrate = D-erythro-isocitrate.","definition_xrefs":["EC:5.1.2.6","RHEA:10820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"isocitrate epimerase activity","secondary_identifiers":["MetaCyc:ISOCITRATE-EPIMERASE-RXN","KEGG_REACTION:R02318"],"synonyms":[{"name":"(1R,2S)-1-hydroxypropane-1,2,3-tricarboxylate 1-epimerase activity","type":"related"}],"termid":"GO:0047755"}


id: GO:0006705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mineralocorticoids, hormonal C21 corticosteroids synthesized from cholesterol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mineralocorticoid metabolic process","termid":"GO:0008212"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"steroid hormone biosynthetic process","termid":"GO:0120178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"mineralocorticoid biosynthetic process","secondary_identifiers":["Reactome:R-HSA-193993"],"synonyms":[{"name":"mineralocorticoid anabolism","type":"exact"},{"name":"mineralocorticoid biosynthesis","type":"exact"},{"name":"mineralocorticoid formation","type":"exact"},{"name":"mineralocorticoid synthesis","type":"exact"}],"termid":"GO:0006705"}


id: MONDO:0017218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Septopreoptic holoprosencephaly (HPE) is a very rare subtype of lobar HPE characterized by midline fusion limited to the septal and/or preoptic regions of the telencephalon without a significant frontal neocortical fusion.","definition_xrefs":["Orphanet:280195"],"gene_count":0,"genotype_count":0,"name":"obsolete septopreoptic holoprosencephaly (obsolete MONDO:0017218)","synonyms":[{"name":"Septopreoptic HPE","type":"exact"}],"termid":"MONDO:0017218","xrefs":{"Monarch":{"xref_id":"0017218"}}}


id: GO:0007477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dorsal part of the body over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"wing disc development","termid":"GO:0035220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notum development","termid":"GO:0007477"}


id: MONDO:0001129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An olfactory neuroblastoma arising in the nasal cavity.","definition_xrefs":["NCIT:C7604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasal cavity cancer","termid":"MONDO:0001128"},{"relation_name":"is_a","term_name":"olfactory neuroblastoma","termid":"MONDO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasal cavity olfactory neuroblastoma","secondary_identifiers":["DOID:10812","UMLS:C1334923","MEDGEN:233749"],"synonyms":[{"name":"nasal cavity olfactory neuroblastoma","type":"exact"},{"name":"olfactory neuroblastoma of nasal cavity","type":"exact"},{"name":"olfactory neuroblastoma of the nasal cavity","type":"exact"}],"termid":"MONDO:0001129","xrefs":{"Monarch":{"xref_id":"0001129"}}}


id: MONDO:0008323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic form of low-renin hypertension characterized by hypertension associated with decreased plasma levels of potassium and aldosterone.","definition_xrefs":["Orphanet:526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Liddle syndrome","secondary_identifiers":["UMLS:C0221043","MedDRA:10052313","GARD:7381","NANDO:2200363","MedDRA:10037113","NCIT:C84827","OMIMPS:177200","DOID:0050477","MESH:D056929","MEDGEN:67439","NANDO:2100131","SCTID:707747007"],"synonyms":[{"name":"LIDLS","type":"related"},{"name":"Liddle syndrome","type":"exact"},{"name":"Liddle's syndrome","type":"exact"},{"name":"pseudoaldosteronism","type":"exact"},{"name":"pseudohyperaldosteronism type 1","type":"narrow"}],"termid":"MONDO:0008323","xrefs":{"Monarch":{"xref_id":"0008323"}}}


id: GO:0045681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of R8 cell differentiation.","definition_xrefs":["GOC:tb","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R8 cell differentiation","termid":"GO:0045679"},{"relation_name":"is_a","term_name":"positive regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110117"},{"relation_name":"positively_regulates","term_name":"R8 cell differentiation","termid":"GO:0045465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of R8 cell differentiation","synonyms":[{"name":"activation of R8 differentiation","type":"narrow"},{"name":"positive regulation of R8 differentiation","type":"exact"},{"name":"stimulation of R8 differentiation","type":"narrow"},{"name":"up regulation of R8 differentiation","type":"exact"},{"name":"up-regulation of R8 differentiation","type":"exact"},{"name":"upregulation of R8 differentiation","type":"exact"}],"termid":"GO:0045681"}


id: GO:0046843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the dorsal filaments, elaborate specializations of the chorion that protrude from the anterior end of the egg and facilitate embryonic respiration.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"egg chorion assembly","termid":"GO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"dorsal appendage formation","termid":"GO:0046843"}


id: PBO:0034231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-shares_ancestor_with","termid":"PBO:0034231"}


id: MONDO:0011973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc deficiency, transient neonatal","secondary_identifiers":["UMLS:C1842486","MEDGEN:330858","OMIM:608118","MESH:C564286"],"synonyms":[{"name":"TNZD","type":"related"},{"name":"zinc deficiency, neonatal, due to Low breast milk zinc","type":"related"},{"name":"zinc deficiency, transient neonatal","type":"exact"},{"name":"zinc in breast milk, reduced","type":"related"}],"termid":"MONDO:0011973","xrefs":{"Monarch":{"xref_id":"0011973"}}}


id: PBO:0084260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral ER membrane protein involved in protein sorting; component of ER-SURF, a pathway involved in retrieving mitochondrial membrane protein precursors and rerouting them to the mitochondrial translocation system; promotes the proteolytic degradation of non-productive mitochondrial precursor proteins suggesting involvement in quality control during protein import; GFP-fusion protein localizes to the ER; member of a conserved family of ER proteins including human homolog TMEM97","termid":"PBO:0084260"}


id: MONDO:0004037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal edema","secondary_identifiers":["DOID:6929","SCTID:6141006","UMLS:C0242420","ICD9:362.83","MEDGEN:69183","MESH:D010211"],"termid":"MONDO:0004037","xrefs":{"Monarch":{"xref_id":"0004037"}}}


id: PBO:0041644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 S","termid":"PBO:0041644"}


id: PBO:0092020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Leucine (uag), mitochondrial","termid":"PBO:0092020"}


id: PBO:0002755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp12 (predicted)","termid":"PBO:0002755"}


id: PBO:0075182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide F","termid":"PBO:0075182"}


id: GO:0090232
data:
  {"annotated_genes":["SJAG_04259","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[117065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the spindle checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and oriented, and chromosomes are attached to the spindle.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spindle checkpoint","termid":"GO:0090231"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle checkpoint","termid":"GO:1901978"},{"relation_name":"positively_regulates","term_name":"spindle checkpoint signaling","termid":"GO:0031577"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of spindle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spindle checkpoint activation","type":"narrow"}],"termid":"GO:0090232","terms_by_termid":{"GO:0090267":null,"GO:1905326":null}}


id: MONDO:0013264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the OPTN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 12","secondary_identifiers":["UMLS:C3150692","DOID:0060203","GARD:15663","MEDGEN:462042","OMIM:613435"],"synonyms":[{"name":"ALS12","type":"exact"},{"name":"OPTN amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 12","type":"exact"},{"name":"amyotrophic lateral sclerosis 12 with or without frontotemporal dementia","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in OPTN","type":"exact"},{"name":"amyotrophic lateral sclerosis type 12","type":"exact"}],"termid":"MONDO:0013264","xrefs":{"Monarch":{"xref_id":"0013264"}}}


id: GO:0070640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamin D3, (3S,5Z,7E)-9,10-secocholesta-5,7,10(19)-trien-3-ol.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D metabolic process","termid":"GO:0042359"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"vitamin D3 metabolic process","synonyms":[{"name":"calciol metabolic process","type":"exact"},{"name":"cholecalciferol metabolic process","type":"exact"},{"name":"vitamin D3 metabolism","type":"exact"}],"termid":"GO:0070640"}


id: SO:0000169
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence in eukaryotic DNA to which RNA polymerase I binds, to begin transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic_promoter","termid":"SO:0002221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_I_promoter","synonyms":[{"name":"RNA polymerase A promoter","type":"exact"},{"name":"RNApol I promoter","type":"exact"},{"name":"pol I promoter","type":"exact"},{"name":"polymerase I promoter","type":"exact"}],"termid":"SO:0000169"}


id: GO:0044048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other (symbiont) organism via a type V secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type V secretion system (obsolete GO:0044048)","termid":"GO:0044048"}


id: PBO:0059647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 13","termid":"PBO:0059647"}


id: GO:0000282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the site where a daughter cell will form, in organisms that reproduce by budding. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0007049","GO:0000281","GO:0008150"],"is_obsolete":false,"name":"cellular bud site selection","synonyms":[{"name":"bud site selection/establishment of cell polarity","type":"broad"}],"termid":"GO:0000282"}


id: MONDO:0006946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormalities of bone mineral metabolism associated with chronic kidney disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary hyperparathyroidism of renal origin","termid":"MONDO:0001530"},{"relation_name":"is_a","term_name":"rickets","termid":"MONDO:0005520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal osteodystrophy","secondary_identifiers":["ICD9:588.0","MEDGEN:20524","UMLS:C0035086","EFO:1001152","SCTID:16726004","MESH:D012080","DOID:13068","MedDRA:10038489","ICD10CM:N25.0"],"synonyms":[{"name":"Osteodystrophies, renal","type":"related"},{"name":"osteodystrophy, renal","type":"related"},{"name":"renal Osteodystrophies","type":"related"},{"name":"renal rickets","type":"exact"},{"name":"rickets, renal","type":"related"}],"termid":"MONDO:0006946","xrefs":{"Monarch":{"xref_id":"0006946"}}}


id: PBO:0070053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 10, pseudogene","termid":"PBO:0070053"}


id: PBO:0049631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 34","termid":"PBO:0049631"}


id: GO:0061240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesonephric nephron tubule are generated and organized. A mesonephric nephron tubule is an epithelial tube that is part of the mesonephric nephron, the functional part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule morphogenesis","termid":"GO:0072171"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"},{"relation_name":"part_of","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron tubule morphogenesis","termid":"GO:0061240"}


id: PBO:0062036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 5","termid":"PBO:0062036"}


id: MONDO:0014090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postaxial polydactyly type A","termid":"MONDO:0019673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, postaxial, type A6","secondary_identifiers":["MEDGEN:815219","UMLS:C3808889","GARD:18176","OMIM:615226"],"synonyms":[{"name":"PAPA6","type":"related"},{"name":"polydactyly, postaxial, type A6","type":"exact"}],"termid":"MONDO:0014090","xrefs":{"Monarch":{"xref_id":"0014090"}}}


id: PBO:0050690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 17","termid":"PBO:0050690"}


id: PBO:0088037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin conjugating enzyme; involved in the ER-associated protein degradation (ERAD) pathway and in the inner nuclear membrane-associated degradation (INMAD) pathway; requires Cue1p for recruitment to the ER membrane; proposed to be involved in chromatin assembly","termid":"PBO:0088037"}


id: PBO:0054585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1988","termid":"PBO:0054585"}


id: PBO:0056867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated monooxygenase, calponin and LIM domain containing 3","termid":"PBO:0056867"}


id: PBO:0077340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 79","termid":"PBO:0077340"}


id: MONDO:0019260
data:
  {"annotated_genes":["SJAG_03052","SJAG_02518"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86766,86765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008083"}]},"cv_name":"mondo","definition":"A genetically heterogeneous group of neuronal ceroid lipofuscinoses (NCLs) with onset during the third decade of life, characterized by dementia, seizures and loss of motor capacities, and sometimes associated with visual loss caused by retinal degeneration.","definition_xrefs":["Orphanet:79262"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis","termid":"MONDO:0016295"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02518":null,"SJAG_03052":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005559","MONDO:0002525","MONDO:0002039","MONDO:0005066"],"is_obsolete":false,"name":"adult neuronal ceroid lipofuscinosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0022797","MEDGEN:7230","NORD:1341","NANDO:2201244","NANDO:1200155","SCTID:62009002","GARD:10973","icd11.foundation:1460031344"],"synonyms":[{"name":"ANCL","type":"exact"},{"name":"CLN4 disease, adult autosomal dominant","type":"related"},{"name":"Kuf's disease","type":"related"},{"name":"Kufs disease","type":"exact"},{"name":"adult NCL","type":"exact"},{"name":"adult neuronal ceroid lipofuscinosis","type":"exact"},{"name":"neuronal ceroid lipofuscinosis 4","type":"related"},{"name":"neuronal ceroid lipofuscinosis of adults","type":"exact"}],"termid":"MONDO:0019260","terms_by_termid":{"MONDO:0008083":null},"xrefs":{"Monarch":{"xref_id":"0019260"}}}


id: PBO:0074300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1 homolog A, structure-specific endonuclease subunit","termid":"PBO:0074300"}


id: PBO:0062546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily K member 2","termid":"PBO:0062546"}


id: PBO:0001097
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocyctinuria","termid":"PBO:0001097"}


id: PR:P0CT84
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1202 gene.","definition_xrefs":["UniProtKB:P0CT84","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L12-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC31H12.04c","synonyms":[{"name":"Spom972h-rpl1202","type":"exact"}],"termid":"PR:P0CT84"}


id: MONDO:0015922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete channelopathy with epilepsy (obsolete MONDO:0015922)","secondary_identifiers":["Orphanet:182083"],"termid":"MONDO:0015922","xrefs":{"Monarch":{"xref_id":"0015922"}}}


id: GO:0061555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of a ganglion. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"ganglion morphogenesis","termid":"GO:0061552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ganglion structural organization","synonyms":[{"name":"ganglia structural organization","type":"related"}],"termid":"GO:0061555"}


id: GO:0060820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Compensating for the two-fold variation in X-chromosome: autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex by the mechanism of heterochromatin formation.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of X chromosome by heterochromatin formation (obsolete GO:0060820)","synonyms":[{"name":"inactivation of X chromosome by heterochromatin assembly","type":"exact"}],"termid":"GO:0060820"}


id: GO:0071233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-leucine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to L-leucine","termid":"GO:0043201"},{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-leucine","synonyms":[{"name":"cellular response to leucine","type":"broad"}],"termid":"GO:0071233"}


id: PBO:0060570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 6","termid":"PBO:0060570"}


id: PR:P87056
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A10.08c gene.","definition_xrefs":["UniProtKB:P87056","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain-containing protein C57A10.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.08c","synonyms":[{"name":"Spom972h-SPAC57A10.08c","type":"exact"}],"termid":"PR:P87056"}


id: MONDO:0010224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Corpus callosum agenesis-abnormal genitalia syndrome is a rare, genetic developmental defect during embryogenesis syndrome characterized by agenesis of the corpus callosum, mild to severe neurological manifestations (intellectual disability, developmental delay, epilepsy, dystonia), and urogenital anomalies (hypospadias, cryptorchidism, renal dysplasia, ambiguous genitalia). Additionally, skeletal anomalies (limb contractures, scoliosis), dysmorphic facial features (large eyes, prominent supraorbital ridges, synophris) and optic atrophy have been observed.","definition_xrefs":["Orphanet:2508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum agenesis-abnormal genitalia syndrome","secondary_identifiers":["DOID:0112151","GARD:4528","OMIM:300004","MEDGEN:163217","UMLS:C0796124","MESH:C563110","SCTID:763797003"],"synonyms":[{"name":"ACC with abnormal genitalia","type":"related"},{"name":"ACC-abnormal genitalia syndrome","type":"exact"},{"name":"New X-linked syndrome with seizures, acquired micrencephaly, and agenesis of the corpus callosum","type":"related"},{"name":"Proud Levine Carpenter syndrome","type":"related"},{"name":"Proud syndrome","type":"exact"},{"name":"Proud-Levine-Carpenter syndrome","type":"exact"},{"name":"corpus callosum, agenesis of, with abnormal genitalia","type":"related"},{"name":"microcephaly-corpus callosum agenesis-abnormal genitalia syndrome","type":"exact"}],"termid":"MONDO:0010224","xrefs":{"Monarch":{"xref_id":"0010224"}}}


id: FYPO:0000084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 6-azauracil. Cells stop growing (and may die) at a concentration of 6-azauracil that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to 6-azauracil","synonyms":[{"name":"hypersensitive to 6-azauracil","type":"exact"},{"name":"sensitive to 6-azauracil during mitotic cell cycle","type":"related"},{"name":"sensitive to 6-azauracil during vegetative growth","type":"exact"}],"termid":"FYPO:0000084"}


id: GO:0043976
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 79 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K79 acetylation (obsolete GO:0043976)","synonyms":[{"name":"histone H3 acetylation at K79","type":"exact"},{"name":"histone H3K79 acetylation","type":"exact"}],"termid":"GO:0043976"}


id: GO:1990818
data:
  {"annotated_genes":["SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97683],"is_not":false,"summary":null,"term":"GO:1990818"}]},"cv_name":"biological_process","definition":"The directed movement of L-arginine out of the vacuole, across the vacuolar membrane.","definition_xrefs":["PMID:26083598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"L-arginine transmembrane export from vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990818","terms_by_termid":{"GO:1990818":null}}


id: MONDO:0013783
data:
  {"annotated_genes":["SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87009],"is_not":false,"summary":null,"term":"MONDO:0013783"}]},"cv_name":"mondo","definition":"Any microphthalmia, isolated, with coloboma in which the cause of the disease is a mutation in the ABCB6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614497","MEDGEN:482657","GARD:15811","UMLS:C3281027"],"synonyms":[{"name":"ABCB6 microphthalmia, isolated, with coloboma","type":"exact"},{"name":"MCOPCB7","type":"related"},{"name":"microphthalmia, isolated, with coloboma 7","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in ABCB6","type":"exact"},{"name":"microphthalmia, isolated, with coloboma type 7","type":"exact"}],"termid":"MONDO:0013783","terms_by_termid":{"MONDO:0013783":null},"xrefs":{"Monarch":{"xref_id":"0013783"}}}


id: MONDO:0017424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-syndromic brachydactyly","secondary_identifiers":["Orphanet:294937"],"synonyms":[{"name":"brachydactyly","type":"related"},{"name":"isolated brachydactyly","type":"related"},{"name":"nonsyndromic brachydactyly","type":"exact"}],"termid":"MONDO:0017424","xrefs":{"Monarch":{"xref_id":"0017424"}}}


id: PBO:0028122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lateral_cortical_nodes_present_in_increased_numbers","termid":"PBO:0028122"}


id: SO:0000540
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA in rearranged configuration including at least one D-J-GENE, one J-GENE and one C-GENE.","direct_ancestors":[{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DJ_J_C_cluster","synonyms":[{"name":"(DJ)-J-C-CLUSTER","type":"exact"},{"name":"DJ J C cluster","type":"exact"}],"termid":"SO:0000540"}


id: PBO:0064878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 37","termid":"PBO:0064878"}


id: PBO:0082789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TREX complex required for nuclear mRNA export; member of the DEAD-box RNA helicase superfamily and is involved in early and late steps of spliceosome assembly; homolog of the human splicing factor hUAP56; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0082789"}


id: PBO:0058531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6076","termid":"PBO:0058531"}


id: PBO:0090041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-plasma membrane tethering protein Ltc2","termid":"PBO:0090041"}


id: GO:0019113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a monooxygenase reaction in which oxygen is incorporated into limonene.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"limonene monooxygenase activity","termid":"GO:0019113"}


id: GO:1901160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving primary amino compound.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary amino compound metabolic process","synonyms":[{"name":"primary amino compound metabolism","type":"exact"}],"termid":"GO:1901160"}


id: GO:0062185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:2 H+ + O2 + 2 reduced [adrenodoxin] + secalciferol = calcitetrol + H2O + 2 oxidized [adrenodoxin].","definition_xrefs":["PMID:10518789","RHEA:49064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"secalciferol 1-monooxygenase activity","termid":"GO:0062185"}


id: MONDO:0007849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratitis fugax hereditaria","secondary_identifiers":["MEDGEN:372107","MESH:C563650","UMLS:C1835697","OMIM:148200","Orphanet:647815"],"synonyms":[{"name":"KEFH","type":"related"},{"name":"KERATOENDOTHELIITIS fugax hereditaria","type":"related"},{"name":"Keratoendotheliitis fugax hereditaria","type":"related"},{"name":"keratitis fugax hereditaria","type":"exact"},{"name":"keratoendotheliitis fugax hereditaria","type":"exact"},{"name":"keratoendothelitis fugax hereditaria","type":"exact"}],"termid":"MONDO:0007849","xrefs":{"Monarch":{"xref_id":"0007849"}}}


id: PBO:0000857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNAse MRP","termid":"PBO:0000857"}


id: PBO:0040169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase domain containing 1","termid":"PBO:0040169"}


id: FYPO:0003113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of sodium nitroprusside than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to sodium nitroprusside","synonyms":[{"name":"resistance to sodium nitroprusside during mitotic cell cycle","type":"related"},{"name":"resistance to sodium nitroprusside during vegetative growth","type":"exact"},{"name":"resistant to sodium nitroprusside","type":"exact"}],"termid":"FYPO:0003113"}


id: MONDO:0004744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"borderline glaucoma","secondary_identifiers":["SCTID:193531003","MEDGEN:735885","UMLS:C1533674","DOID:9283","ICD9:365.00"],"synonyms":[{"name":"Preglaucoma","type":"exact"}],"termid":"MONDO:0004744","xrefs":{"Monarch":{"xref_id":"0004744"}}}


id: FYPO:0005558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of microtubule bundles is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0002399","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule bundle","secondary_identifiers":["FYPO:0005795"],"synonyms":[{"name":"abnormal MT bundle","type":"exact"},{"name":"abnormal microtubule array","type":"related"},{"name":"abnormal microtubule bundle physical object quality","type":"exact"},{"name":"abnormal microtubule bundle structure","type":"narrow"}],"termid":"FYPO:0005558"}


id: PBO:0067631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 803, pseudogene","termid":"PBO:0067631"}


id: FYPO:0006696
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of S-adenosyl-L-homocysteine (SAH) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular S-adenosyl-L-homocysteine level during vegetative growth","synonyms":[{"name":"decreased S-adenosyl-L-homocysteine accumulation during vegetative growth","type":"related"},{"name":"decreased cellular S-adenosyl-L-homocysteine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular S-adenosylhomocysteine level during vegetative growth","type":"exact"},{"name":"decreased cellular SAH level during vegetative growth","type":"exact"},{"name":"reduced cellular S-adenosyl-L-homocysteine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006696"}


id: MONDO:0003016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sarcomatoid mesothelioma (obsolete MONDO:0003016)","termid":"MONDO:0003016","xrefs":{"Monarch":{"xref_id":"0003016"}}}


id: PBO:0077095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell immunoglobulin and mucin domain containing 4","termid":"PBO:0077095"}


id: FYPO:0005459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair via nonhomologous end joining (NHEJ) does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished double-strand break repair","termid":"FYPO:0005436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0001320","FYPO:0005447","FYPO:0000298"],"is_obsolete":false,"name":"abolished double-strand break repair via nonhomologous end joining","synonyms":[{"name":"abolished double-strand break repair via NHEJ","type":"exact"},{"name":"abolished double-strand break repair via nonhomologous end joining during mitotic cell cycle","type":"related"},{"name":"abolished double-strand break repair via nonhomologous end joining during vegetative growth","type":"exact"},{"name":"double-strand break repair via nonhomologous end joining abolished","type":"exact"}],"termid":"FYPO:0005459"}


id: PBO:0067536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 680, pseudogene","termid":"PBO:0067536"}


id: MONDO:0010895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disease that is characterized by albinism, black lock, cell migration disorder of the neurocytes of the gut and sensorineural deafness and has material basis in a mutation in the endothelin B receptor gene (EDNRB).","definition_xrefs":["DOID:0050600","OMIM:600501"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"ABCD syndrome","secondary_identifiers":["MESH:C535334","MEDGEN:333014","Orphanet:918","UMLS:C1838099"],"synonyms":[{"name":"ABCD syndrome","type":"exact"},{"name":"ABCDS","type":"related"},{"name":"albinism, black lock, cell migration disorder of the Neurocytes of the gut, and deafness","type":"related"},{"name":"albinism, block lock, cell migration disorder of the neurocytes of the gut, and deafness","type":"exact"}],"termid":"MONDO:0010895","xrefs":{"Monarch":{"xref_id":"0010895"}}}


id: GO:0004045
data:
  {"annotated_genes":["SJAG_00936","SJAG_00308","SJAG_05008","SJAG_05221"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76377,78148,98981,102411],"is_not":false,"summary":null,"term":"GO:0004045"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acyl-L-alpha-aminoacyl-tRNA + H2O = an N-acyl-L-amino acid + a tRNA + H+.","definition_xrefs":["RHEA:54448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00308":null,"SJAG_00936":null,"SJAG_05008":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0016788","GO:0140101","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"peptidyl-tRNA hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0019851","EC:3.1.1.29","GO:0019850","MetaCyc:AMINOCYL-TRNA-HYDROLASE-RXN"],"synonyms":[{"name":"D-tyrosyl-tRNA hydrolase activity","type":"narrow"},{"name":"N-substituted aminoacyl transfer RNA hydrolase activity","type":"related"},{"name":"aminoacyl-tRNA aminoacylhydrolase activity","type":"related"},{"name":"aminoacyl-tRNA hydrolase reaction","type":"exact"},{"name":"aminoacyl-transfer ribonucleate hydrolase activity","type":"related"}],"termid":"GO:0004045","terms_by_termid":{"GO:0004045":null}}


id: PBO:0113330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; deletion confers sensitivity to osmotic stress","termid":"PBO:0113330"}


id: GO:0050379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucuronate = UDP-L-iduronate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"UDP-glucuronate 5'-epimerase activity","secondary_identifiers":["KEGG_REACTION:R01387"],"synonyms":[{"name":"C-5-uronosyl epimerase activity","type":"related"},{"name":"UDP-glucuronate 5' epimerase activity","type":"exact"},{"name":"UDP-glucuronic acid 5'-epimerase activity","type":"related"},{"name":"UDP-glucuronic acid epimerase activity","type":"related"},{"name":"UDPglucuronate 5'-epimerase activity","type":"related"},{"name":"uridine diphosphoglucuronate 5'-epimerase activity","type":"related"}],"termid":"GO:0050379"}


id: PBO:0062262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 18","termid":"PBO:0062262"}


id: PBO:0029646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell_population_at_high_temperature_(obsolete_FYPO:0002074)","termid":"PBO:0029646"}


id: GO:0048783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cyanophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cyanophore differentiation","termid":"GO:0048781"},{"relation_name":"is_a","term_name":"positive regulation of pigment cell differentiation","termid":"GO:0050942"},{"relation_name":"positively_regulates","term_name":"cyanophore differentiation","termid":"GO:0048774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cyanophore differentiation","synonyms":[{"name":"activation of cyanophore differentiation","type":"narrow"},{"name":"stimulation of cyanophore differentiation","type":"narrow"},{"name":"up regulation of cyanophore differentiation","type":"exact"},{"name":"up-regulation of cyanophore differentiation","type":"exact"},{"name":"upregulation of cyanophore differentiation","type":"exact"}],"termid":"GO:0048783"}


id: GO:0046866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of tetraterpenoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Tetraterpenoids are terpenoids with eight isoprene units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"tetraterpenoid transport","termid":"GO:0046866"}


id: GO:0023048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a lipid signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by lipid mediator (obsolete GO:0023048)","synonyms":[{"name":"signal initiation by lipid mediator","type":"exact"}],"termid":"GO:0023048"}


id: MONDO:0001889
data:
  {"annotated_genes":["SJAG_03698","SJAG_00377","SJAG_03418","SJAG_03720","SJAG_02954","SJAG_04950","SJAG_00103","SJAG_02339","SJAG_04738","SJAG_02294","SJAG_04114","SJAG_03051","SJAG_04703","SJAG_04148","SJAG_02690"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[86295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[87284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[85971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[86729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[87530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[86340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[85957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[86746,86747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[86042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[86443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[87338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[86931,86932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","definition":"The inability of the ovaries to function.","definition_xrefs":["NCIT:C113351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00377":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02690":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"ovarian dysfunction","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:509544","UMLS:C0154208","EFO:0009003","icd11.foundation:1801368748","SCTID:37102008","DOID:1414","ICD9:256.39","ICD10CM:E28","ICD9:256.8","ICD9:256.3","ICD9:256.9"],"synonyms":[{"name":"ovarian failure","type":"exact"},{"name":"ovarian hypofunction","type":"exact"},{"name":"ovarian insufficiency","type":"exact"}],"termid":"MONDO:0001889","terms_by_termid":{"MONDO:0008840":null,"MONDO:0009258":null,"MONDO:0010350":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014843":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null},"xrefs":{"Monarch":{"xref_id":"0001889"}}}


id: PBO:0075929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 21","termid":"PBO:0075929"}


id: PR:O94387
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C29A10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.10c","synonyms":[{"name":"Spom972h-dbl8","type":"exact"}],"termid":"PR:O94387"}


id: MONDO:0000370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Askin's tumor (obsolete MONDO:0000370)","termid":"MONDO:0000370","xrefs":{"Monarch":{"xref_id":"0000370"}}}


id: SO:1000083
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence variant increases the stability (half-life) of the transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000083 sequence_variant_increasing_transcript_stability (obsolete SO:1000083)","synonyms":[{"name":"mutation increasing transcript stability","type":"related"},{"name":"sequence variant increasing transcript stability","type":"exact"}],"termid":"SO:1000083"}


id: GO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a GPI-anchored ephrin to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:9530499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ephrin receptor activity","termid":"GO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0038023","GO:0140096","GO:0016740","GO:0004672","GO:0016301"],"is_obsolete":false,"name":"GPI-linked ephrin receptor activity","synonyms":[{"name":"GPI-linked Eph receptor activity","type":"exact"}],"termid":"GO:0005004"}


id: FYPO:0004078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cyclosporin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on cyclosporin A","synonyms":[{"name":"normal cell population growth in presence of cyclosporin A","type":"exact"},{"name":"normal cell population growth on cyclosporin A","type":"exact"},{"name":"normal cellular response to cyclosporin A","type":"related"},{"name":"normal vegetative cell population growth on cyclosporin A","type":"exact"}],"termid":"FYPO:0004078"}


id: PBO:0044331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 12","termid":"PBO:0044331"}


id: GO:0050380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: di-trans,octa-cis-undecaprenyl diphosphate + H2O = di-trans,octa-cis-undecaprenyl phosphate + H+ + phosphate.","definition_xrefs":["PMID:18411271","RHEA:28094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"undecaprenyl-diphosphatase activity","secondary_identifiers":["EC:3.6.1.27","KEGG_REACTION:R05627","MetaCyc:UNDECAPRENYL-DIPHOSPHATASE-RXN"],"synonyms":[{"name":"C(55)-isoprenyl diphosphatase activity","type":"related"},{"name":"C(55)-isoprenyl pyrophosphatase activity","type":"related"},{"name":"C55-isoprenyl diphosphatase activity","type":"related"},{"name":"C55-isoprenyl pyrophosphatase activity","type":"related"},{"name":"isoprenyl pyrophosphatase activity","type":"related"},{"name":"undecaprenyl-diphosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0050380"}


id: GO:1902394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of exodeoxyribonuclease activity.","definition_xrefs":["GOC:TermGenie","GOC:jl","PMID:1234"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of exodeoxyribonuclease activity (obsolete GO:1902394)","synonyms":[{"name":"activation of exodeoxyribonuclease activity","type":"narrow"},{"name":"up regulation of exodeoxyribonuclease activity","type":"exact"},{"name":"up-regulation of exodeoxyribonuclease activity","type":"exact"},{"name":"upregulation of exodeoxyribonuclease activity","type":"exact"}],"termid":"GO:1902394"}


id: PBO:0027464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_primary_cell_septum_biogenesis","termid":"PBO:0027464"}


id: PBO:0000011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_dependent_on","termid":"PBO:0000011"}


id: GO:0005678
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any protein complex that acts in the formation of nucleosomes or higher order chromatin structure.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin assembly complex (obsolete GO:0005678)","synonyms":[{"name":"chromatin assembly complex","type":"exact"},{"name":"nucleosome assembly complex","type":"narrow"}],"termid":"GO:0005678"}


id: PBO:0040306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+/K+ transporting subunit alpha","termid":"PBO:0040306"}


id: PBO:0080911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta","termid":"PBO:0080911"}


id: PBO:0028380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_hypoxanthine_DNA_N-glycosylase_activity","termid":"PBO:0028380"}


id: GO:2000561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of CD4-positive, alpha-beta T cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell proliferation","termid":"GO:0046640"},{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000514"},{"relation_name":"regulates","term_name":"CD4-positive, alpha-beta T cell proliferation","termid":"GO:0035739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD4-positive, alpha-beta T cell proliferation","termid":"GO:2000561"}


id: PBO:0078388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-3","termid":"PBO:0078388"}


id: GO:1901523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of icosanoid.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"icosanoid catabolic process","synonyms":[{"name":"icosanoid breakdown","type":"exact"},{"name":"icosanoid catabolism","type":"exact"},{"name":"icosanoid degradation","type":"exact"}],"termid":"GO:1901523"}


id: PBO:0055224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2650","termid":"PBO:0055224"}


id: PBO:0049665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H19 imprinted maternally expressed transcript","termid":"PBO:0049665"}


id: PBO:0080227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitrin","termid":"PBO:0080227"}


id: FYPO:0002615
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the pre-autophagosomal structure is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to pre-autophagosomal structure","termid":"FYPO:0002614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to pre-autophagosomal structure","synonyms":[{"name":"decreased protein localisation to pre-autophagosomal structure","type":"exact"},{"name":"decreased protein localization to PAS","type":"exact"},{"name":"decreased protein localization to pre-autophagosomal structure during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to pre-autophagosomal structure during vegetative growth","type":"exact"},{"name":"reduced protein localization to pre-autophagosomal structure","type":"exact"}],"termid":"FYPO:0002615"}


id: GO:0000048
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-tRNA(1) + aminoacyl-tRNA(2) = tRNA(1) + peptidylaminoacyl-tRNA(2). This reaction is catalyzed by a ribozyme.","definition_xrefs":["PMID:11433365","PMID:9242921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746","GO:0140101","GO:0140098","GO:0140096"],"is_obsolete":false,"name":"peptidyltransferase activity","secondary_identifiers":["EC:2.3.2.12","MetaCyc:PEPTIDYLTRANSFERASE-RXN","Reactome:R-HSA-156912"],"termid":"GO:0000048"}


id: GO:1990560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a DNA methyltransferase.","definition_xrefs":["PMID:22880885"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methyltransferase binding (obsolete GO:1990560)","synonyms":[{"name":"DNA methyltransferase binding","type":"exact"}],"termid":"GO:1990560"}


id: PBO:0052984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L antigen family member 3","termid":"PBO:0052984"}


id: PBO:0046885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 9 member A","termid":"PBO:0046885"}


id: PBO:0065066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteoglycan 4","termid":"PBO:0065066"}


id: GO:0004672
data:
  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id: GO:0098522
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id: PBO:0027627
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_plasmid_catenanes","termid":"PBO:0027627"}


id: MONDO:0005353
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. The excessive use of marijuana with associated psychological symptoms and impairment in social or occupational functioning.","definition_xrefs":["EFO:0004218"],"gene_count":0,"genotype_count":0,"name":"obsolete marijuana dependence (obsolete MONDO:0005353)","termid":"MONDO:0005353","xrefs":{"Monarch":{"xref_id":"0005353"}}}


id: GO:0098962
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id: PBO:0065401
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit alpha 4","termid":"PBO:0065401"}


id: PBO:0042283
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD1c molecule","termid":"PBO:0042283"}


id: MOD:00803
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-tyrosine residue by a thioether bond to form 3-(S-L-cysteinyl)-L-tyrosine.","definition_xrefs":["PubMed:15342250","RESID:AA0396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"3-(S-L-cysteinyl)-L-tyrosine","synonyms":[{"name":"(2S,3R)-2-amino-3-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-3-(4-hydroxyphenyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxyethylthio)-3-(4-hydroxyphenyl)propanoic acid","type":"exact"},{"name":"3-(L-cystein-S-yl)-L-tyrosine","type":"exact"},{"name":"CROSSLNK 3-(S-cysteinyl)-tyrosine (Cys-Tyr)","type":"exact"},{"name":"S-(tyros-3'-yl)cysteine","type":"exact"},{"name":"XLNKSCys3Tyr","type":"exact"}],"termid":"MOD:00803"}


id: PBO:0024477
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex associated protein (Meikin) Moa1","termid":"PBO:0024477"}


id: GO:0006493
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id: FYPO:0005402
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the single-stranded telomeric 3' overhang is longer than normal.","definition_xrefs":["PMID:12861005","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology during vegetative growth","termid":"FYPO:0002254"},{"relation_name":"is_a","term_name":"abnormal telomere structure","termid":"FYPO:0006510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0000293","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased telomeric 3' overhang length during vegetative growth","synonyms":[{"name":"increased single-stranded telomeric 3' overhang length during vegetative growth","type":"exact"},{"name":"increased telomere 3' overhang length during vegetative growth","type":"exact"},{"name":"increased telomeric 3' overhang length during mitotic cell cycle","type":"related"},{"name":"increased telomeric G-strand overhang length during vegetative growth","type":"exact"}],"termid":"FYPO:0005402"}


id: PBO:0046681
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonic testis differentiation homolog C","termid":"PBO:0046681"}


id: PBO:0036221
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id: GO:1990920
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id: GO:0050843
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"S-adenosylmethionine metabolic process","termid":"GO:0046500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"S-adenosylmethionine catabolic process","synonyms":[{"name":"S-adenosyl methionine catabolic process","type":"exact"},{"name":"S-adenosyl methionine catabolism","type":"exact"},{"name":"S-adenosylmethionine breakdown","type":"exact"},{"name":"S-adenosylmethionine catabolism","type":"exact"},{"name":"S-adenosylmethionine degradation","type":"exact"},{"name":"SAM catabolic process","type":"exact"}],"termid":"GO:0050843"}


id: MONDO:0022605
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete brachymetapody anodontia hypotrichosis albinoidism (obsolete MONDO:0022605)","termid":"MONDO:0022605","xrefs":{"Monarch":{"xref_id":"0022605"}}}


id: GO:1901389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of transforming growth factor beta activation.","definition_xrefs":["GOC:TermGenie","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transforming growth factor beta activation (obsolete GO:1901389)","synonyms":[{"name":"down regulation of L-TGF-beta activation","type":"exact"},{"name":"down regulation of TGF-B activation","type":"exact"},{"name":"down regulation of TGF-beta activation","type":"exact"},{"name":"down regulation of TGFB activation","type":"exact"},{"name":"down regulation of TGFbeta activation","type":"exact"},{"name":"down regulation of latent TGF-beta activation","type":"exact"},{"name":"down regulation of transforming growth factor beta activation","type":"exact"},{"name":"down-regulation of L-TGF-beta activation","type":"exact"},{"name":"down-regulation of TGF-B activation","type":"exact"},{"name":"down-regulation of TGF-beta activation","type":"exact"},{"name":"down-regulation of TGFB activation","type":"exact"},{"name":"down-regulation of TGFbeta activation","type":"exact"},{"name":"down-regulation of latent TGF-beta activation","type":"exact"},{"name":"down-regulation of transforming growth factor beta activation","type":"exact"},{"name":"downregulation of L-TGF-beta activation","type":"exact"},{"name":"downregulation of TGF-B activation","type":"exact"},{"name":"downregulation of TGF-beta activation","type":"exact"},{"name":"downregulation of TGFB activation","type":"exact"},{"name":"downregulation of TGFbeta activation","type":"exact"},{"name":"downregulation of latent TGF-beta activation","type":"exact"},{"name":"downregulation of transforming growth factor beta activation","type":"exact"},{"name":"inhibition of L-TGF-beta activation","type":"exact"},{"name":"inhibition of TGF-B activation","type":"exact"},{"name":"inhibition of TGF-beta activation","type":"exact"},{"name":"inhibition of TGFB activation","type":"exact"},{"name":"inhibition of TGFbeta activation","type":"exact"},{"name":"inhibition of latent TGF-beta activation","type":"exact"},{"name":"inhibition of transforming growth factor beta activation","type":"narrow"},{"name":"negative regulation of L-TGF-beta activation","type":"exact"},{"name":"negative regulation of TGF-B activation","type":"exact"},{"name":"negative regulation of TGF-beta activation","type":"exact"},{"name":"negative regulation of TGFB activation","type":"exact"},{"name":"negative regulation of TGFbeta activation","type":"exact"},{"name":"negative regulation of latent TGF-beta activation","type":"exact"}],"termid":"GO:1901389"}


id: MONDO:0001948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Riedel's fibrosing thyroiditis (obsolete MONDO:0001948)","termid":"MONDO:0001948","xrefs":{"Monarch":{"xref_id":"0001948"}}}


id: PBO:0090515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 and Swr1 complex YEATS family subunit Yaf9","termid":"PBO:0090515"}


id: PBO:0014254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, human WDR24 family","termid":"PBO:0014254"}


id: PBO:0076423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 10","termid":"PBO:0076423"}


id: PBO:0050633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor family, X-linked member 3","termid":"PBO:0050633"}


id: GO:0005344
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to oxygen and delivering it to an acceptor molecule or a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular carrier activity","termid":"GO:0140104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"oxygen carrier activity","secondary_identifiers":["GO:0015033"],"synonyms":[{"name":"globin","type":"narrow"},{"name":"hemerythrin","type":"narrow"},{"name":"hemocyanin","type":"narrow"},{"name":"oxygen-carrying","type":"narrow"}],"termid":"GO:0005344"}


id: PBO:0036310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in vesicle docking Pep5/Vps11-like (predicted)","termid":"PBO:0036310"}


id: GO:0160048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of fusing together the edges of a craniofacial suture.","definition_xrefs":["PMID:33842480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone morphogenesis","termid":"GO:0060349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"craniofacial suture closure","termid":"GO:0160048"}


id: PBO:0063918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta pseudogene 1","termid":"PBO:0063918"}


id: PR:O14308
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swc4 gene.","definition_xrefs":["UniProtKB:O14308","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1-complex protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.13c","synonyms":[{"name":"Spom972h-swc4","type":"exact"}],"termid":"PR:O14308"}


id: MONDO:0013527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lissencephaly in which the cause of the disease is a mutation in the NDE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microlissencephaly","termid":"MONDO:0015204"},{"relation_name":"is_a","term_name":"microcephaly with lissencephaly and/or hydranencephaly","termid":"MONDO:0700116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0700092"],"is_obsolete":false,"name":"lissencephaly 4","secondary_identifiers":["UMLS:C3151461","MEDGEN:462811","DOID:0112235","OMIM:614019"],"synonyms":[{"name":"LIS4","type":"related"},{"name":"NDE1 lissencephaly (disease)","type":"exact"},{"name":"lissencephaly (disease) caused by mutation in NDE1","type":"exact"},{"name":"lissencephaly 4","type":"exact"},{"name":"lissencephaly 4 (with microcephaly)","type":"exact"},{"name":"lissencephaly 4 with microcephaly","type":"related"},{"name":"lissencephaly 4, with microcephaly","type":"related"},{"name":"lissencephaly type 4","type":"exact"}],"termid":"MONDO:0013527","xrefs":{"Monarch":{"xref_id":"0013527"}}}


id: GO:0140866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-20 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:34755534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-20-mediated signaling pathway","synonyms":[{"name":"IL-20-mediated signaling pathway","type":"exact"},{"name":"interleukin-20-mediated signalling pathway","type":"exact"}],"termid":"GO:0140866"}


id: PR:O14234
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sodium leak channel non-selective protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01143","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium-channel protein cch1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.01","secondary_identifiers":["UniProtKB:O14234"],"synonyms":[{"name":"Spom972h-NALCN","type":"exact"}],"termid":"PR:O14234"}


id: GO:2000341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine (C-X-C motif) ligand 2 production.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"chemokine (C-X-C motif) ligand 2 production","termid":"GO:0072567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of chemokine (C-X-C motif) ligand 2 production","secondary_identifiers":["GO:1904207","GO:0035926"],"synonyms":[{"name":"chemokine (C-C motif) ligand 2 secretion","type":"narrow"},{"name":"regulation of CCL2 secretion","type":"narrow"},{"name":"regulation of CXCL2 production","type":"exact"},{"name":"regulation of MIP-2 production","type":"exact"},{"name":"regulation of MIP2 production","type":"exact"},{"name":"regulation of SCYB2 production","type":"exact"},{"name":"regulation of chemokine (C-C motif) ligand 2 secretion","type":"narrow"}],"termid":"GO:2000341"}


id: PR:O59747
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyl-protein thioesterase-dolichyl pyrophosphate phosphatase fusion 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.12c","synonyms":[{"name":"Spom972h-pdf1","type":"exact"}],"termid":"PR:O59747"}


id: PBO:0074717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 77B","termid":"PBO:0074717"}


id: PBO:0079483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin","termid":"PBO:0079483"}


id: PBO:0049389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 2","termid":"PBO:0049389"}


id: FYPO:0006384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of endocytosis is decreased when the cell is subject to nitrogen starvation. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis","termid":"FYPO:0003886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased rate of endocytosis during nitrogen starvation","synonyms":[{"name":"decreased rate of actin-mediated endocytosis during nitrogen starvation","type":"exact"},{"name":"decreased rate of endocytosis during nitrogen depletion","type":"exact"},{"name":"decreased rate of endocytosis during nitrogen deprivation","type":"exact"},{"name":"decreased rate of protein internalization during nitrogen starvation","type":"narrow"},{"name":"reduced rate of endocytosis during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006384"}


id: PBO:0031567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_binding_phenotype","termid":"PBO:0031567"}


id: PBO:0062301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 12 pseudogene","termid":"PBO:0062301"}


id: FYPO:0009099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing mannitol as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0001985","FYPO:0002058","FYPO:0000003","FYPO:0005447","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on mannitol carbon source","synonyms":[{"name":"decreased growth on mannitol carbon source","type":"broad"},{"name":"decreased vegetative cell growth on mannitol carbon source","type":"exact"},{"name":"reduced cell growth on mannitol carbon source","type":"related"},{"name":"slow cell growth on mannitol carbon source","type":"narrow"}],"termid":"FYPO:0009099"}


id: PBO:0054085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1436","termid":"PBO:0054085"}


id: MONDO:1010941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant histiocytosis that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant histiocytosis, non-human animal","termid":"MONDO:1010210"},{"relation_name":"is_a","term_name":"histiocytosis, pig","termid":"MONDO:1011529"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant histiocytosis, pig","secondary_identifiers":["OMIA:000620-9823"],"termid":"MONDO:1010941","xrefs":{"Monarch":{"xref_id":"1010941"}}}


id: PBO:0029133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spindle_pole_body_absent_from_cell_after_meiosis_II","termid":"PBO:0029133"}


id: PBO:0073844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 8 member A3","termid":"PBO:0073844"}


id: GO:1902503
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of adenylyltransferase activity.","definition_xrefs":["GOC:TermGenie","GOC:bhm","PMID:11713534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"adenylyltransferase complex","synonyms":[{"name":"ThiF-ThiS complex","type":"related"}],"termid":"GO:1902503"}


id: MONDO:0009707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopathy with giant abnormal mitochondria","secondary_identifiers":["UMLS:C1850717","OMIM:255140","MEDGEN:376864","MESH:C564971"],"synonyms":[{"name":"myopathy with giant abnormal mitochondria","type":"exact"}],"termid":"MONDO:0009707","xrefs":{"Monarch":{"xref_id":"0009707"}}}


id: GO:0019166
data:
  {"annotated_genes":["SJAG_02717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111701],"is_not":false,"summary":null,"term":"GO:0019166"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + NADP+ = trans-2,3-dehydroacyl-CoA + NADPH + H+.","definition_xrefs":["EC:1.3.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trans-2-enoyl-CoA reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6809810","RHEA:33763","Reactome:R-HSA-8952873","MetaCyc:TRANSENOYLCOARED-RXN","Reactome:R-HSA-6786720"],"synonyms":[{"name":"NADPH-dependent trans-2-enoyl-CoA reductase activity","type":"related"},{"name":"acyl-CoA:NADP+ trans-2-oxidoreductase activity","type":"related"},{"name":"reductase, trans-enoyl coenzyme A","type":"related"}],"termid":"GO:0019166","terms_by_termid":{"GO:0019166":null}}


id: PBO:0074578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smad nuclear interacting protein 1","termid":"PBO:0074578"}


id: GO:0004838
data:
  {"annotated_genes":["SJAG_03312"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98678],"is_not":false,"summary":null,"term":"GO:0004838"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate.","definition_xrefs":["RHEA:15093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic-amino-acid transaminase activity","termid":"GO:0008793"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"L-tyrosine-2-oxoglutarate transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-517444","Reactome:R-HSA-71155","UM-BBD_reactionID:r0297","MetaCyc:TYROSINE-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"L-phenylalanine 2-oxoglutarate aminotransferase activity","type":"related"},{"name":"L-tyrosine aminotransferase activity","type":"broad"},{"name":"L-tyrosine transaminase activity","type":"broad"},{"name":"L-tyrosine:2-oxoglutarate aminotransferase activity","type":"exact"},{"name":"TyrAT activity","type":"related"},{"name":"glutamic phenylpyruvic aminotransferase activity","type":"related"},{"name":"glutamic-hydroxyphenylpyruvic transaminase activity","type":"related"},{"name":"phenylalanine aminotransferase activity","type":"related"},{"name":"phenylalanine transaminase activity","type":"related"},{"name":"phenylalanine-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"phenylpyruvate transaminase activity","type":"related"},{"name":"phenylpyruvic acid transaminase activity","type":"related"},{"name":"tyrosine aminotransferase activity","type":"broad"},{"name":"tyrosine transaminase activity","type":"broad"},{"name":"tyrosine-2-ketoglutarate aminotransferase activity","type":"broad"},{"name":"tyrosine-alpha-ketoglutarate aminotransferase activity","type":"broad"},{"name":"tyrosine-alpha-ketoglutarate transaminase activity","type":"broad"}],"termid":"GO:0004838","terms_by_termid":{"GO:0004838":null}}


id: MONDO:0006692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system disorder caused by demyelination within the central basis pontis of the brain. It is characterized by spastic quadriplegia, pseudobulbar palsy and encephalopathy. It is observed in patients with severe hyponatremia, particularly when the hyponatremia is corrected too rapidly.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease","termid":"MONDO:0002562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"central pontine myelinolysis","secondary_identifiers":["ICD9:341.8","EFO:1000857","NCIT:C84623","DOID:636","ICD10CM:G37.2","MEDGEN:64511","MESH:D017590","SCTID:6807001","icd11.foundation:558060012","MedDRA:10007968","UMLS:C0206083"],"synonyms":[{"name":"osmotic demyelination syndrome","type":"exact"}],"termid":"MONDO:0006692","xrefs":{"Monarch":{"xref_id":"0006692"}}}


id: GO:0018124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of the epsilon-amino group of a peptidyl-lysine with peptidyl-topaquinone, a modified tyrosine residue.","definition_xrefs":["RESID:AA0233"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 5'-(N6-L-lysine)-L-topaquinone (obsolete GO:0018124)","termid":"GO:0018124"}


id: RO:0008502
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of epiphyte of","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_epiphyte","termid":"RO:0008502"}


id: PBO:0081289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 72B, pseudogene","termid":"PBO:0081289"}


id: PBO:0058263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4641","termid":"PBO:0058263"}


id: PBO:0045771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular matrix protein 1 pseudogene 2","termid":"PBO:0045771"}


id: GO:0003935
data:
  {"annotated_genes":["SJAG_04711","SJAG_00376"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58759,60264],"is_not":false,"summary":null,"term":"GO:0003935"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + 4 H2O = 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)-pyrimidine + formate + 3 H+ + 2 phosphate.","definition_xrefs":["EC:3.5.4.25","RHEA:23704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP cyclohydrolase activity","termid":"GO:0003933"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00376":null,"SJAG_04711":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"GTP cyclohydrolase II activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["KEGG_REACTION:R00425","MetaCyc:GTP-CYCLOHYDRO-II-RXN"],"synonyms":[{"name":"GTP 7,8-8,9-dihydrolase (diphosphate-forming)","type":"related"},{"name":"GTP-8-formylhydrolase activity","type":"related"},{"name":"guanosine triphosphate cyclohydrolase II","type":"related"}],"termid":"GO:0003935","terms_by_termid":{"GO:0003935":null}}


id: GO:0048723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the clypeus over time, from its formation to the mature structure. The clypeus is the shield-shaped plate on an insect's head.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clypeus development","termid":"GO:0048723"}


id: PBO:0012039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator Rng2-like (predicted)","termid":"PBO:0012039"}


id: MONDO:0020044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive metabolic cerebellar ataxia","secondary_identifiers":["GARD:19413","MEDGEN:1842756","Orphanet:98096","UMLS:C5681517"],"termid":"MONDO:0020044","xrefs":{"Monarch":{"xref_id":"0020044"}}}


id: FYECO:0000394
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which caspofungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers at lethal dose for the assayed cell density.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ caspofungin SLD","termid":"FYECO:0000393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ caspofungin LD","termid":"FYECO:0000394"}


id: PBO:0053183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor cluster member 8","termid":"PBO:0053183"}


id: PBO:0003812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nop8 (predicted)","termid":"PBO:0003812"}


id: PBO:0088050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin ligase that modifies and regulates RNA Pol II; involved in a putative alcohol-responsive signaling pathway; accumulates in the nucleus under alcohol stress; has a role in organization of septins and the actin cytoskeleton; contains a Ring/PHD finger domain similar to the mammalian rA9 protein","termid":"PBO:0088050"}


id: PBO:0058657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6785","termid":"PBO:0058657"}


id: FYPO:0001649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of glutamate into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import","termid":"FYPO:0001058"},{"relation_name":"is_a","term_name":"abnormal glutamate import","termid":"FYPO:0001646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased glutamate import","synonyms":[{"name":"decreased L-glutamate import","type":"exact"},{"name":"decreased glutamate import across plasma membrane","type":"exact"},{"name":"decreased glutamate import into cell","type":"exact"},{"name":"decreased glutamate uptake","type":"exact"},{"name":"reduced glutamate import","type":"exact"}],"termid":"FYPO:0001649"}


id: MONDO:0011577
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85603,85604],"is_not":false,"summary":null,"term":"MONDO:0011577"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body myositis","termid":"MONDO:0007827"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, proximal, and ophthalmoplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:381340","OMIM:605637","UMLS:C1854106","MESH:C565311","DOID:0080719"],"synonyms":[{"name":"MYOPATHY, proximal, and ophthalmoplegia","type":"related"},{"name":"MYPOP","type":"related"},{"name":"inclusion body myopathy 3, autosomal dominant","type":"related"},{"name":"inclusion body myopathy 3, autosomal dominant, formerly","type":"related"},{"name":"myopathy with congenital joint contractures, ophthalmoplegia, and rimmed vacuoles","type":"related"},{"name":"myopathy, proximal, and ophthalmoplegia","type":"exact"},{"name":"proximal myopathy and ophthalmoplegia","type":"exact"}],"termid":"MONDO:0011577","terms_by_termid":{"MONDO:0011577":null},"xrefs":{"Monarch":{"xref_id":"0011577"}}}


id: PBO:0042166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 27","termid":"PBO:0042166"}


id: PBO:0079382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 1 class VI","termid":"PBO:0079382"}


id: FYPO:0007988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in meiosis I in which cells form meotic spindle microtubules that are longer than normal, and extend beyond the spindle pole body. The protruding spindle microtubules are surrounded by an extension of the nuclear envelope.","definition_xrefs":["PMID:32327557","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000120","FYPO:0002399","FYPO:0000002","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"long spindle microtubules protruding beyond spindle pole body during meiosis I","termid":"FYPO:0007988"}


id: PBO:0062429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 90 pseudogene","termid":"PBO:0062429"}


id: PBO:0074130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 31 member 2","termid":"PBO:0074130"}


id: GO:0097588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility due to movement of bacterial- or archaeal-type flagella.","definition_xrefs":["GOC:krc","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium or flagellum-dependent cell motility","termid":"GO:0001539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"archaeal or bacterial-type flagellum-dependent cell motility","termid":"GO:0097588"}


id: PBO:0075354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOWAHC pseudogene 2","termid":"PBO:0075354"}


id: PBO:0070717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 22","termid":"PBO:0070717"}


id: PBO:0051983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jagged canonical Notch ligand 2","termid":"PBO:0051983"}


id: PBO:0090168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2C catalytic subunit Ptc2","termid":"PBO:0090168"}


id: PBO:0074549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 1","termid":"PBO:0074549"}


id: PBO:0043849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3b/C4b receptor 1 (Knops blood group)","termid":"PBO:0043849"}


id: PBO:0045085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta like canonical Notch ligand 3","termid":"PBO:0045085"}


id: PBO:0064522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C","termid":"PBO:0064522"}


id: PBO:0041655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 1","termid":"PBO:0041655"}


id: PBO:0047397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO36 intronic transcript 1","termid":"PBO:0047397"}


id: PBO:0047472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl-diphosphate farnesyltransferase 1","termid":"PBO:0047472"}


id: PBO:0057051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR137 host gene","termid":"PBO:0057051"}


id: PBO:0047021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A24, pseudogene","termid":"PBO:0047021"}


id: GO:0010572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or frequency of platelet activation. Platelet activation is a series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet activation","termid":"GO:0010543"},{"relation_name":"is_a","term_name":"positive regulation of cell activation","termid":"GO:0050867"},{"relation_name":"positively_regulates","term_name":"platelet activation","termid":"GO:0030168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of platelet activation","termid":"GO:0010572"}


id: MONDO:0022790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft tongue","secondary_identifiers":["UMLS:C0266111","MEDGEN:82731"],"synonyms":[{"name":"bifid tongue","type":"related"},{"name":"cleft tongue syndrome","type":"related"}],"termid":"MONDO:0022790","xrefs":{"Monarch":{"xref_id":"0022790"}}}


id: PBO:0081179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zymogen granule protein 16","termid":"PBO:0081179"}


id: PBO:0051618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin enhancer binding factor 2","termid":"PBO:0051618"}


id: PBO:0000852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-S isoprenylcysteine O-methyltransferase Mam4","termid":"PBO:0000852"}


id: PR:Q9USR6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-acetyltransferase 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02576","PANTHER:PTHR13256:SF10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 9-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.03c","secondary_identifiers":["UniProtKB:Q9USR6"],"synonyms":[{"name":"Spom972h-NAT9","type":"exact"}],"termid":"PR:Q9USR6"}


id: GO:0120264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, extent or location of chromosome attachment to the nuclear envelope.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of chromosome attachment to the nuclear envelope","termid":"GO:0120264"}


id: PBO:0004111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 family regulatory subunit (predicted)","termid":"PBO:0004111"}


id: GO:0016361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with activin-bound type II activin receptor to initiate a change in cell activity; upon binding, acts as a downstream transducer of activin signals.","definition_xrefs":["GOC:mah","PMID:8622651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin receptor activity","termid":"GO:0017002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0004672","GO:0140096","GO:0003824","GO:0003674","GO:0038023"],"is_obsolete":false,"name":"activin receptor activity, type I","synonyms":[{"name":"type I activin receptor activity","type":"exact"}],"termid":"GO:0016361"}


id: PBO:0061870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one cut homeobox 2","termid":"PBO:0061870"}


id: MONDO:0000218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete preimplantation embryonic lethality (obsolete MONDO:0000218)","secondary_identifiers":["OMIMPS:616814"],"termid":"MONDO:0000218","xrefs":{"Monarch":{"xref_id":"0000218"}}}


id: MONDO:0030059
data:
  {"annotated_genes":["SJAG_00342"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85687],"is_not":false,"summary":null,"term":"MONDO:0030059"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 87","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5394501","DOID:0112221","OMIM:618916","GARD:16393","MEDGEN:1719688"],"synonyms":[{"name":"DEE87","type":"exact"},{"name":"EIEE87","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 87","type":"exact"},{"name":"developmental and epileptic encephalopathy 87","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 87","type":"exact"}],"termid":"MONDO:0030059","terms_by_termid":{"MONDO:0030059":null},"xrefs":{"Monarch":{"xref_id":"0030059"}}}


id: PBO:0076117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 1","termid":"PBO:0076117"}


id: SO:0001269
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a signal recognition particle (SRP) RNA.","direct_ancestors":[{"relation_name":"has_quality","term_name":"SRP_RNA_encoding","termid":"SO:0000642"},{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP_RNA_gene","synonyms":[{"name":"SRP RNA gene","type":"exact"}],"termid":"SO:0001269"}


id: PBO:0044890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEP domain containing 1 pseudogene 1","termid":"PBO:0044890"}


id: MONDO:0000688
data:
  {"annotated_genes":["SJAG_00947","SJAG_03069","SJAG_02433","SJAG_01199","SJAG_01597","SJAG_03290","SJAG_00944","SJAG_03258","SJAG_00737","SJAG_02641","SJAG_00413","SJAG_03560"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009603"},{"annotations":[87255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009787"},{"annotations":[85683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012435"},{"annotations":[87331,87332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044723"},{"annotations":[85622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044724"},{"annotations":[87350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008760"},{"annotations":[85991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013661"},{"annotations":[86611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[85458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014057"},{"annotations":[87011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[85547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"}]},"cv_name":"mondo","definition":"An inherited disorder that affects the metabolism of any acidic compound containing carbon in a covalent linkage.","definition_xrefs":["NCIT:C101334"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00737":null,"SJAG_00944":null,"SJAG_00947":null,"SJAG_01199":null,"SJAG_01597":null,"SJAG_02433":null,"SJAG_02641":null,"SJAG_03069":null,"SJAG_03258":null,"SJAG_03290":null,"SJAG_03560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"inborn organic aciduria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060159","icd11.foundation:1921636230","ICD9:277.89","GARD:9433","MEDGEN:66037","UMLS:C0241775","Orphanet:289899"],"synonyms":[{"name":"disorder of organic acid metabolism","type":"broad"},{"name":"inborn error of organic acid metabolic process","type":"exact"},{"name":"inborn organic acid metabolic process disorder","type":"exact"},{"name":"inherited organic acidemia","type":"related"},{"name":"organic acid metabolism disorder","type":"broad"},{"name":"organic acidemia","type":"exact"},{"name":"organic aciduria","type":"exact"},{"name":"rare inborn error of organic acid metabolic process","type":"exact"}],"termid":"MONDO:0000688","terms_by_termid":{"MONDO:0008760":null,"MONDO:0009529":null,"MONDO:0009603":null,"MONDO:0009666":null,"MONDO:0009787":null,"MONDO:0010184":null,"MONDO:0012435":null,"MONDO:0013661":null,"MONDO:0014057":null,"MONDO:0044723":null,"MONDO:0044724":null},"xrefs":{"Monarch":{"xref_id":"0000688"}}}


id: SO:0001333
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Peroxywybutosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxywybutosine","secondary_identifiers":["RNAMOD:038"],"synonyms":[{"name":"o2yW","type":"exact"}],"termid":"SO:0001333"}


id: PBO:0035892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_neddylation","termid":"PBO:0035892"}


id: GO:0043603
data:
  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chemical reactions and pathways involving an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group, as carried out by individual cells.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic 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id: GO:0042804
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with identical proteins to form a homooligomer.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete protein homooligomerization activity (obsolete GO:0042804)","synonyms":[{"name":"oligomerization activity","type":"broad"},{"name":"protein homooligomerization activity","type":"exact"}],"termid":"GO:0042804"}


id: PBO:0015240
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase/ ubiquitin ligase E3 (predicted)","termid":"PBO:0015240"}


id: MONDO:0100377
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(10;11)(p12;q23). (A cytogenetic abnormality that refers to the translocation of chromosome 10p12 with chromosome 11q23. It is associated with acute myeloid leukemia in childhood.)","definition_xrefs":["NCIT:C132102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, t(10;11)(p12;q23)","secondary_identifiers":["NCIT:C132101"],"synonyms":[{"name":"AML, t(10;11)(p12;q23)","type":"exact"}],"termid":"MONDO:0100377","xrefs":{"Monarch":{"xref_id":"0100377"}}}


id: PBO:0018030
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium ion transmembrane transporter Mrs2 (predicted)","termid":"PBO:0018030"}


id: PBO:0070578
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 44","termid":"PBO:0070578"}


id: PATO:0000153
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000153 absolute threshold (obsolete PATO:0000153)","termid":"PATO:0000153"}


id: GO:1903499
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  {"annotated_genes":["SJAG_03048","SJAG_00082","SJAG_01787","SJAG_04597","SJAG_01805","SJAG_02392","SJAG_00845","SJAG_02838","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94139,119744],"is_not":false,"summary":null,"term":"GO:1903499"},{"annotations":[111139,96184,94701,91093,102707,104038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[90322,94743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring assembly.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cell_cycle","GOC:vw","PMID:18256290","GOC:al","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"is_a","term_name":"regulation of cytokinesis, actomyosin contractile ring assembly","termid":"GO:2000431"},{"relation_name":"regulates","term_name":"mitotic actomyosin contractile ring assembly","termid":"GO:1903475"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00845":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0000281","GO:0008150","GO:0007049","GO:0030036"],"is_obsolete":false,"name":"regulation of mitotic actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32915139":null},"synonyms":[{"name":"regulation of actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"regulation of contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"regulation of cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"regulation of mitotic cytokinesis, actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903499","terms_by_termid":{"GO:0120306":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null}}


id: MONDO:0017352
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  {"annotated_genes":["SJAG_00359"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012393"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00359":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of glutamine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:289841","ICD9:270.7","MEDGEN:575171","SCTID:190724004","GARD:21156","UMLS:C0342669"],"termid":"MONDO:0017352","terms_by_termid":{"MONDO:0012393":null},"xrefs":{"Monarch":{"xref_id":"0017352"}}}


id: GO:0048383
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesectoderm over time, from its formation to the mature structure. In animal embryos, mesectoderm development processes give rise to both mesoderm and ectoderm tissues.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"ectoderm development","termid":"GO:0007398"},{"relation_name":"part_of","term_name":"mesoderm development","termid":"GO:0007498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesectoderm development","termid":"GO:0048383"}


id: GO:0080096
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidate + a sterol = a sterol ester + a lysophosphatidate.","definition_xrefs":["PMID:16020547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phosphatidate-sterol O-acyltransferase activity","termid":"GO:0080096"}


id: PBO:0062045
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 32 pseudogene","termid":"PBO:0062045"}


id: FYPO:0000647
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a vegetative cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"cell lysis","termid":"FYPO:0002488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"vegetative cell lysis","synonyms":[{"name":"cell lysis during vegetative growth","type":"exact"},{"name":"cytolysis during vegetative growth","type":"exact"},{"name":"inviable, lysed vegetative cell","type":"exact"},{"name":"vegetative cell lysis during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000647"}


id: MONDO:0010346
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MRX52 (obsolete MONDO:0010346)","secondary_identifiers":["OMIM:300504"],"termid":"MONDO:0010346","xrefs":{"Monarch":{"xref_id":"0010346"}}}


id: PBO:0084841
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; appears as two protein spots (YmL34 and YmL38) on two-dimensional SDS gels; protein abundance increases in response to DNA replication stress","termid":"PBO:0084841"}


id: GO:0050545
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-sulfopyruvate + H+ = CO2 + sulfoacetaldehyde.","definition_xrefs":["EC:4.1.1.79","RHEA:20948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"sulfopyruvate decarboxylase activity","secondary_identifiers":["MetaCyc:R231-RXN","KEGG_REACTION:R05774"],"synonyms":[{"name":"sulfopyruvate carboxy-lyase (2-sulfoacetaldehyde-forming)","type":"related"},{"name":"sulfopyruvate carboxy-lyase activity","type":"related"},{"name":"sulphopyruvate decarboxylase activity","type":"exact"}],"termid":"GO:0050545"}


id: PBO:0048235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 4","termid":"PBO:0048235"}


id: PR:Q10253
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug64 gene.","definition_xrefs":["UniProtKB:Q10253","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 64 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.05c","synonyms":[{"name":"Spom972h-mug64","type":"exact"}],"termid":"PR:Q10253"}


id: FYPO:0007708
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to one or both cell tips shows a normal (i.e. indistinguishable from wild type) temporal pattern of localization. For example, a protein may move from one cell tip to the other at a normal frequency and amplitude.","definition_xrefs":["PMID:30279276","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal dynamic protein localization pattern","termid":"FYPO:0006999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal dynamic protein localization to cell tip","synonyms":[{"name":"normal dynamic protein localization to cell end","type":"exact"},{"name":"normal dynamic protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"normal dynamic protein localization to cell tip during vegetative growth","type":"exact"},{"name":"normal oscillatory protein localization to cell tip","type":"narrow"}],"termid":"FYPO:0007708"}


id: GO:1990757
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id: MONDO:0054716
data:
  {"annotated_genes":["SJAG_04070"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85414],"is_not":false,"summary":null,"term":"MONDO:0054716"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04070":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 19, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16253","MEDGEN:1616860","DOID:0070281","UMLS:C4540488","OMIM:617800"],"synonyms":[{"name":"MCPH19","type":"related"},{"name":"microcephaly 19, PRIMARY, autosomal recessive","type":"related"},{"name":"primary autosomal recessive microcephaly 19","type":"related"}],"termid":"MONDO:0054716","terms_by_termid":{"MONDO:0054716":null},"xrefs":{"Monarch":{"xref_id":"0054716"}}}


id: PBO:0064284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing O1","termid":"PBO:0064284"}


id: GO:1902635
data:
  {"annotated_genes":["SJAG_02613","SJAG_03170","SJAG_00053","SJAG_01863"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92172],"is_not":false,"summary":null,"term":"GO:1902635"},{"annotations":[90736,104722],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902647"},{"annotations":[117924],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:22562153","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate biosynthetic process","termid":"GO:0046854"},{"relation_name":"is_a","term_name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolic process","termid":"GO:1902633"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01863":null,"SJAG_02613":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate anabolism","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthesis","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate formation","type":"exact"},{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate synthesis","type":"exact"},{"name":"PtdIns(4,5)P(2) biosynthesis","type":"exact"},{"name":"phosphatidylinositol-4,5-bisphosphate biosynthesis","type":"exact"}],"termid":"GO:1902635","terms_by_termid":{"GO:1902635":null,"GO:1902647":null,"GO:1902648":null}}


id: MONDO:0009007
data:
  {"annotated_genes":["SJAG_04111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85670],"is_not":false,"summary":null,"term":"MONDO:0009007"}]},"cv_name":"mondo","definition":"Jalili syndrome is characterized by the association of amelogenesis imperfecta (AI) and cone-rod retinal dystrophy (CORD).","definition_xrefs":["Orphanet:1873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04111":null},"genotype_count":0,"is_obsolete":false,"name":"Jalili syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:520.5","MEDGEN:501210","DOID:0111404","ICD10CM:H35.5","GARD:1463","ICD9:362.75","MESH:C000596385","SCTID:707608003","UMLS:C3495589","OMIM:217080"],"synonyms":[{"name":"Jalili syndrome","type":"exact"},{"name":"cone rod dystrophy-amelogenesis imperfecta syndrome","type":"exact"},{"name":"cone-rod dystrophy amelogenesis imperfecta","type":"related"},{"name":"cone-rod dystrophy and amelogenesis imperfecta","type":"related"},{"name":"cone-rod dystrophy with amelogenesis imperfecta","type":"related"}],"termid":"MONDO:0009007","terms_by_termid":{"MONDO:0009007":null},"xrefs":{"Monarch":{"xref_id":"0009007"}}}


id: PBO:0070535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a","termid":"PBO:0070535"}


id: _global:regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p regulates q iff p is causally upstream of q, the execution of p is not constant and varies according to specific conditions, and p influences the rate or magnitude of execution of q due to an effect either on some enabler of q or some enabler of a part of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"_global:causally_upstream_of"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates","secondary_identifiers":["RO:0002211"],"termid":"_global:regulates"}


id: FYPO:0002761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule bundle formation, which normally results in a parallel arrangement of microtubules, is abnormal.","definition_xrefs":["PomBase:mah","GO:0001578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal microtubule bundle formation","synonyms":[{"name":"abnormal microtubule array formation","type":"related"}],"termid":"FYPO:0002761"}


id: PBO:0085217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyl transferase involved in protein palmitoylation; acts as a negative regulator of pheromone response pathway; required for endocytosis of pheromone receptors; involved in cell shape control; contains ankyrin repeats; AKR1 has a paralog, AKR2, that arose from the whole genome duplication; any of several human homologs encoding DHHC-type zinc fingers (ZDHHC) can complement temperature sensitivity of yeast akr1 null mutant","termid":"PBO:0085217"}


id: PBO:0052306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0232","termid":"PBO:0052306"}


id: PBO:0078336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 2-1","termid":"PBO:0078336"}


id: PBO:0090024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination mediator Swi5","termid":"PBO:0090024"}


id: PBO:0065069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prickle planar cell polarity protein 1","termid":"PBO:0065069"}


id: PR:Q9C1X4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bop1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C1X4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein P32A8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP32A8.03c","synonyms":[{"name":"Spom972h-bop1","type":"exact"}],"termid":"PR:Q9C1X4"}


id: MONDO:1012797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta that occurs in dogs due to a mutation in the COL1A1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta, dog","termid":"MONDO:1011581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteogenesis imperfecta, type III, COL1A1-related, dog","secondary_identifiers":["OMIA:002126-9615"],"synonyms":[{"name":"osteogenesis imperfecta, type III, COL1A1-related, dog","type":"exact"}],"termid":"MONDO:1012797","xrefs":{"Monarch":{"xref_id":"1012797"}}}


id: PBO:0073620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 6","termid":"PBO:0073620"}


id: PBO:0117248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ferric iron reductase (NADPH) Frp1","termid":"PBO:0117248"}


id: GO:0045903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the ability of the translational apparatus to interpret the genetic code.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational fidelity","termid":"GO:0006450"},{"relation_name":"is_a","term_name":"positive regulation of translation","termid":"GO:0045727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translational fidelity","synonyms":[{"name":"activation of translational fidelity","type":"narrow"},{"name":"stimulation of translational fidelity","type":"narrow"},{"name":"up regulation of translational fidelity","type":"exact"},{"name":"up-regulation of translational fidelity","type":"exact"},{"name":"upregulation of translational fidelity","type":"exact"}],"termid":"GO:0045903"}


id: GO:0036106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class II peroxisomal membrane targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome membrane in a PEX19-independent manner.","definition_xrefs":["GOC:pm","PMID:14709540","PMID:17020786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome membrane targeting sequence binding","termid":"GO:0033328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005048"],"is_obsolete":false,"name":"peroxisome membrane class-2 targeting sequence binding","synonyms":[{"name":"PEX19-independent mPTS binding","type":"related"},{"name":"class 2 mPTS binding","type":"exact"}],"termid":"GO:0036106"}


id: PBO:0039542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 39","termid":"PBO:0039542"}


id: GO:0102740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: theobromine + S-adenosyl-L-methionine = H+ + caffeine + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete theobromine:S-adenosyl-L-methionine 1-N-methyltransferase activity (obsolete GO:0102740)","termid":"GO:0102740"}


id: FYPO:0000580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore wall biogenesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"},{"relation_name":"is_a","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000121","FYPO:0000631"],"is_obsolete":false,"name":"abnormal ascospore wall biogenesis","synonyms":[{"name":"abnormal ascospore wall organization","type":"related"},{"name":"abnormal spore wall formation","type":"related"},{"name":"abnormal spore wall organization","type":"related"},{"name":"spore wall formation: abnormal","type":"related"}],"termid":"FYPO:0000580"}


id: PBO:0039687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC regulator of WNT signaling pathway","termid":"PBO:0039687"}


id: PR:O60117
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.03 gene.","definition_xrefs":["UniProtKB:O60117","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C16G5.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.03","synonyms":[{"name":"Spom972h-SPBC16G5.03","type":"exact"}],"termid":"PR:O60117"}


id: PBO:0059199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X6, pseudogene","termid":"PBO:0059199"}


id: MONDO:0044230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epiblepharon of upper 51d (obsolete MONDO:0044230)","secondary_identifiers":["OMIM:131460"],"synonyms":[{"name":"epiblepharon of upper lid","type":"related"}],"termid":"MONDO:0044230","xrefs":{"Monarch":{"xref_id":"0044230"}}}


id: PBO:0089466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane sensing transcription coactivator, ankyrin repeat containing Mga2","termid":"PBO:0089466"}


id: MONDO:0008425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Shprintzen-Goldberg omphalocele syndrome is a very rare inherited malformation syndrome characterized by omphalocele, scoliosis, mild dysmorphic features (downslanted palpebral fissures, s-shaped eyelids and thin upper lip), laryngeal and pharyngeal hypoplasia and learning disabilities.","definition_xrefs":["Orphanet:3164"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalocele syndrome, Shprintzen-Goldberg type","secondary_identifiers":["MESH:C537329","SCTID:716230005","OMIM:182210","UMLS:C1866958","GARD:9850","MEDGEN:356653"],"synonyms":[{"name":"Shprintzen omphalocele syndrome","type":"related"},{"name":"Shprintzen-Goldberg omphalocele syndrome","type":"related"},{"name":"laryngeal and pharyngeal hypoplasia with omphalocele","type":"related"},{"name":"omphalocele with hypoplasia of pharynx and larynx, learning disability, dysmorphic facies, and scoliosis","type":"related"},{"name":"omphalocele, laryngeal and pharyngeal hypoplasia, learning disabilities, dysmorphic facies and spinal anomalies","type":"related"},{"name":"pharynx and larynx hypoplasia with omphalocele","type":"related"}],"termid":"MONDO:0008425","xrefs":{"Monarch":{"xref_id":"0008425"}}}


id: PBO:0074978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-20","termid":"PBO:0074978"}


id: PBO:0079814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UHRF1BP1L divergent transcript","termid":"PBO:0079814"}


id: GO:1902867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of retina development in camera-type eye.","definition_xrefs":["PMID:16872597","GO_REF:0000058","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of retina development in camera-type eye","termid":"GO:1902866"},{"relation_name":"negatively_regulates","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retina development in camera-type eye","synonyms":[{"name":"down regulation of retina development in camera-style eye","type":"exact"},{"name":"down regulation of retina development in camera-type eye","type":"exact"},{"name":"down regulation of retinal development","type":"related"},{"name":"down-regulation of retina development in camera-style eye","type":"exact"},{"name":"down-regulation of retina development in camera-type eye","type":"exact"},{"name":"down-regulation of retinal development","type":"related"},{"name":"downregulation of retina development in camera-style eye","type":"exact"},{"name":"downregulation of retina development in camera-type eye","type":"exact"},{"name":"downregulation of retinal development","type":"related"},{"name":"inhibition of retina development in camera-style eye","type":"narrow"},{"name":"inhibition of retina development in camera-type eye","type":"narrow"},{"name":"inhibition of retinal development","type":"related"},{"name":"negative regulation of retina development in camera-style eye","type":"exact"},{"name":"negative regulation of retinal development","type":"related"}],"termid":"GO:1902867"}


id: PBO:0061001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHP2 ribonucleoprotein pseudogene 1","termid":"PBO:0061001"}


id: GO:0071758
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgW isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgW immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IgW immunoglobulin complex","termid":"GO:0071758"}


id: PBO:0052180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 12","termid":"PBO:0052180"}


id: MONDO:0013907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bilateral generalized polymicrogyria is a rare neurological disorder that affects the cerebral cortex (the outer surface of the brain). This is the most widespread form of polymicrogyria and typically affects the entire surface of the brain. Signs and symptoms include severe intellectual disability, problems with movement, and seizures that are difficult or impossible to treat. While the exact cause of bilateral generalized polymicrogyria is not fully understood, it is thought to be due to improper brain development during embryonic growth. Most cases appear to follow an autosomal recessive pattern of inheritance. Treatment is based on the signs and symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral polymicrogyria","termid":"MONDO:0017091"},{"relation_name":"is_a","term_name":"microcephalic primordial dwarfism due to RTTN deficiency","termid":"MONDO:0018764"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"bilateral generalized polymicrogyria","secondary_identifiers":["GARD:10786","MEDGEN:1684616","UMLS:C5139324","Orphanet:208447","DOID:0080920"],"synonyms":[{"name":"MSSP","type":"related"},{"name":"PMGYS","type":"related"},{"name":"bilateral generalized polymicrogyria","type":"exact"},{"name":"microcephaly, short stature, and polymicrogyria with or without seizures","type":"related"},{"name":"microcephaly, short stature, and polymicrogyria with seizures","type":"exact"},{"name":"polymicrogyria with seizures","type":"related"}],"termid":"MONDO:0013907","xrefs":{"Monarch":{"xref_id":"0013907"}}}


id: MONDO:0000389
data:
  {"annotated_genes":["SJAG_02463","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87071,87072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009727"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"atelosteogenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:108720","DOID:0050648","UMLS:C5574658","MEDGEN:1806597","SCTID:43814000"],"termid":"MONDO:0000389","terms_by_termid":{"MONDO:0009727":null},"xrefs":{"Monarch":{"xref_id":"0000389"}}}


id: PBO:0049235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 6","termid":"PBO:0049235"}


id: GO:1904219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of CDP-diacylglycerol-serine O-phosphatidyltransferase activity.","definition_xrefs":["GO_REF:0000059","GOC:BHF","PMID:16120614","GOC:rl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity (obsolete GO:1904219)","synonyms":[{"name":"activation of CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"narrow"},{"name":"activation of CDP-diglyceride:serine phosphatidyltransferase activity","type":"narrow"},{"name":"activation of CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of PS synthase activity","type":"narrow"},{"name":"activation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of phosphatidylserine synthase activity","type":"narrow"},{"name":"activation of phosphatidylserine synthetase activity","type":"narrow"},{"name":"positive regulation of CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of CDP-diglyceride:serine phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of PS synthase activity","type":"exact"},{"name":"positive regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of phosphatidylserine synthase activity","type":"exact"},{"name":"positive regulation of phosphatidylserine synthetase activity","type":"exact"},{"name":"up regulation of CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of CDP-diglyceride:serine phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of PS synthase activity","type":"exact"},{"name":"up regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of phosphatidylserine synthase activity","type":"exact"},{"name":"up regulation of phosphatidylserine synthetase activity","type":"exact"},{"name":"up-regulation of CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of CDP-diglyceride:serine phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of PS synthase activity","type":"exact"},{"name":"up-regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of phosphatidylserine synthase activity","type":"exact"},{"name":"up-regulation of phosphatidylserine synthetase activity","type":"exact"},{"name":"upregulation of CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of CDP-diglyceride:serine phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of PS synthase activity","type":"exact"},{"name":"upregulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of phosphatidylserine synthase activity","type":"exact"},{"name":"upregulation of phosphatidylserine synthetase activity","type":"exact"}],"termid":"GO:1904219"}


id: MOD:00813
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an threonine residue to an O-fucosylthreonine.","definition_xrefs":["PubMed:11857757","PubMed:1900431","PubMed:11344537","RESID:AA0405","Unimod:295#T","PubMed:15189151","PubMed:1740125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-threonine","termid":"MOD:00005"},{"relation_name":"is_a","term_name":"fucosylated","termid":"MOD:00614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-fucosyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-(6-deoxy-alpha-D-galactopyranosyloxy)butanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Fuc) threonine","type":"exact"},{"name":"CARBOHYD O-linked (dHex)","type":"exact"},{"name":"Fucose","type":"related"},{"name":"O-fucosyl-L-threonine","type":"exact"},{"name":"O-glycosylthreonine","type":"exact"},{"name":"O3-fucosylthreonine","type":"exact"},{"name":"OFucThr","type":"exact"},{"name":"dHex","type":"related"}],"termid":"MOD:00813"}


id: MONDO:1010897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lysosomal disease characterized by the accumulation of sphingomyelin and cholesterol in lysosomes that occurs in cats due to a mutation in the SMPD1 gene.","definition_xrefs":["PMID:32347185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, domestic cat","termid":"MONDO:1010861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Niemann-Pick disease, SMPD1-related, domestic cat","secondary_identifiers":["OMIA:001795-9685"],"synonyms":[{"name":"Niemann-Pick disease, type A, domestic cat","type":"related"}],"termid":"MONDO:1010897","xrefs":{"Monarch":{"xref_id":"1010897"}}}


id: PBO:0113031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the oligosaccharyltransferase (OST) complex; the OST complex catalyzes asparagine-linked glycosylation of newly synthesized proteins in the ER lumen; involved in recognition of N-acetylglucosamine; forms a subcomplex with Ost3p and Ost4p","termid":"PBO:0113031"}


id: MONDO:0027664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chemotherapy-induced toxicity","termid":"MONDO:0800390"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cisplatin toxicity","secondary_identifiers":["Orphanet:240863"],"termid":"MONDO:0027664","xrefs":{"Monarch":{"xref_id":"0027664"}}}


id: GO:0031413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates an organism's tendency or ability to rise or float in a fluid medium such as water or air, often through the use of stored gases.","definition_xrefs":["GOC:mah","PATO:0001420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of buoyancy","synonyms":[{"name":"buoyancy regulation","type":"exact"}],"termid":"GO:0031413"}


id: GO:0042217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1-aminocyclopropane-1-carboxylate, a natural product found in plant tissues. It is a key intermediate in the biosynthesis of ethylene (ethene), a fruit-ripening hormone in plants.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-aminocyclopropane-1-carboxylate metabolic process","termid":"GO:0018871"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate catabolic process","synonyms":[{"name":"1-aminocyclopropane-1-carboxylate breakdown","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate catabolism","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate degradation","type":"exact"}],"termid":"GO:0042217"}


id: PBO:0069791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1077, pseudogene","termid":"PBO:0069791"}


id: MONDO:0018041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other immunodeficiency syndrome with predominantly antibody defects (obsolete MONDO:0018041)","secondary_identifiers":["Orphanet:331244"],"termid":"MONDO:0018041","xrefs":{"Monarch":{"xref_id":"0018041"}}}


id: GO:0050369
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-seryl-[tyrosine-3-monooxygenase] = ADP + H+ + O-phospho-L-seryl-[tyrosine-3-monooxygenase].","definition_xrefs":["EC:2.7.11.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0004672","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"[tyrosine 3-monooxygenase] kinase activity","secondary_identifiers":["MetaCyc:2.7.11.6-RXN","RHEA:17133"],"synonyms":[{"name":"ATP:tyrosine-3-monoxygenase phosphotransferase activity","type":"related"},{"name":"STK4","type":"related"},{"name":"pheochromocytoma tyrosine hydroxylase-associated kinase activity","type":"related"},{"name":"tyrosine 3-monooxygenase kinase (phosphorylating) activity","type":"related"},{"name":"tyrosine 3-monooxygenase kinase activity","type":"exact"}],"termid":"GO:0050369"}


id: GO:0043680
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of cell wall invaginations in a synergid cell, similar to those in transfer cells.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell wall","termid":"GO:0005618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"filiform apparatus","termid":"GO:0043680"}


id: FYPO:0007056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of substances via vesicles from the Golgi to other parts of the cell is abnormal..","definition_xrefs":["PomBase:mah","GO:0006892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal post-Golgi vesicle-mediated transport","synonyms":[{"name":"abnormal exit from TGN","type":"exact"},{"name":"abnormal post-Golgi transport","type":"exact"},{"name":"abnormal post-Golgi vesicle-mediated transport during mitotic cell cycle","type":"related"},{"name":"abnormal post-Golgi vesicle-mediated transport during vegetative growth","type":"exact"}],"termid":"FYPO:0007056"}


id: PBO:0052533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 6","termid":"PBO:0052533"}


id: GO:1901827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of zeaxanthin.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00843","MetaCyc:PWY-5944","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll biosynthetic process","termid":"GO:0016123"},{"relation_name":"is_a","term_name":"zeaxanthin metabolic process","termid":"GO:1901825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"zeaxanthin biosynthetic process","synonyms":[{"name":"zeaxanthin anabolism","type":"exact"},{"name":"zeaxanthin biosynthesis","type":"exact"},{"name":"zeaxanthin formation","type":"exact"},{"name":"zeaxanthin synthesis","type":"exact"}],"termid":"GO:1901827"}


id: PBO:0085776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein necessary for stability of L-A dsRNA-containing particles","termid":"PBO:0085776"}


id: GO:0090174
data:
  {"annotated_genes":["SJAG_03403","SJAG_03347","SJAG_01697","SJAG_03848","SJAG_00430","SJAG_04023","SJAG_03552","SJAG_01324","SJAG_02587","SJAG_02315","SJAG_01633","SJAG_00826","SJAG_04513","SJAG_02241","SJAG_00557","SJAG_03670","SJAG_02595","SJAG_03536","SJAG_00204","SJAG_05184","SJAG_03889","SJAG_04978","SJAG_04739","SJAG_00810","SJAG_00171","SJAG_00380","SJAG_01379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016320"},{"annotations":[71625,79945,99846,100050,74931,77464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034058"},{"annotations":[96278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048210"},{"annotations":[78977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048288"},{"annotations":[76012],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035493"},{"annotations":[78059,110025,78353,90904,117901,113072,117946,101421,76919,72388,98427,76554,101191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006906"},{"annotations":[76514,74249,78107,57778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"The joining of two lipid bilayers to form a single organelle membrane.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"},{"relation_name":"is_a","term_name":"membrane fusion","termid":"GO:0061025"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00204":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00557":null,"SJAG_00810":null,"SJAG_00826":null,"SJAG_01324":null,"SJAG_01379":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_02241":null,"SJAG_02315":null,"SJAG_02587":null,"SJAG_02595":null,"SJAG_03347":null,"SJAG_03403":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03670":null,"SJAG_03848":null,"SJAG_03889":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04739":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"organelle membrane fusion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0090174","terms_by_termid":{"GO:0006906":null,"GO:0016320":null,"GO:0034058":null,"GO:0035493":null,"GO:0048210":null,"GO:0048280":null,"GO:0048288":null}}


id: GO:0100040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates invasive growth in response to glucose limitation.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of invasive growth in response to glucose limitation by transcription from RNA polymerase II promoter (obsolete GO:0100040)","termid":"GO:0100040"}


id: PBO:0052341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 1B","termid":"PBO:0052341"}


id: GO:0043459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a single or short exposure to a lithium ion stimulus.","definition_xrefs":["PMID:10208444"],"gene_count":0,"genotype_count":0,"name":"obsolete response to short exposure to lithium ion (obsolete GO:0043459)","synonyms":[{"name":"response to short exposure to lithium ion","type":"exact"}],"termid":"GO:0043459"}


id: PBO:0113202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microtubule-associated protein; component of the interface between microtubules and the kinetochore; involved in sister chromatid separation and mitotic spindle elongation; involved in karyogamy during mating; stabilizes Kip2p at microtubule plus ends and recruits Kip2p to mitotic SPBs; essential in polyploid cells but not in haploid or diploid cells; promotes plus-end directed movement of Dyn1p; ortholog of mammalian CLIP-170","termid":"PBO:0113202"}


id: PBO:0090593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal-dependent phosphatase involved in cellular detoxification/metabolite repair (predicted)","termid":"PBO:0090593"}


id: PBO:0061948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 1","termid":"PBO:0061948"}


id: PBO:0054785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2198","termid":"PBO:0054785"}


id: GO:0031211
data:
  {"annotated_genes":["SJAG_01349","SJAG_04451"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75227,110517],"is_not":false,"summary":null,"term":"GO:0031211"}]},"cv_name":"cellular_component","definition":"A complex of the endoplasmic reticulum that catalyzes S-palmitoylation, the addition of palmitate (C16:0) or other long-chain fatty acids to proteins at a cysteine residue.","definition_xrefs":["GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoyltransferase complex","termid":"GO:0002178"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01349":null,"SJAG_04451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"endoplasmic reticulum palmitoyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031211","terms_by_termid":{"GO:0031211":null}}


id: PBO:0054072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1422","termid":"PBO:0054072"}


id: GO:0039563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host STAT1 (signal transducer and activator of transcription 1).","definition_xrefs":["PMID:32699158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of STAT activity","termid":"GO:0039562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of STAT1 activity","secondary_identifiers":["VZ:282"],"synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of STAT1 activity","type":"narrow"},{"name":"inhibition by virus of host STAT1 activity","type":"narrow"},{"name":"inhibition of host STAT1 by virus","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of STAT1 activity","type":"narrow"},{"name":"suppression by virus of host STAT1 activity","type":"narrow"}],"termid":"GO:0039563"}


id: GO:0050764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phagocytosis, the process in which phagocytes engulf external particulate material.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"regulates","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of phagocytosis","termid":"GO:0050764"}


id: GO:0035671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an enone + NADPH + H+ = a ketone + NADP+.","definition_xrefs":["GOC:kad","PMID:17945329","PMID:19166903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"enone reductase activity","secondary_identifiers":["MetaCyc:RXN-12267"],"termid":"GO:0035671"}


id: GO:1904562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidylinositol 5-phosphate.","definition_xrefs":["GOC:TermGenie","PMID:23916588","GOC:dph","GOC:autophagy","GOC:PARL","GO_REF:0000068","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylinositol 5-phosphate metabolic process","synonyms":[{"name":"phosphatidylinositol 5-phosphate metabolism","type":"exact"}],"termid":"GO:1904562"}


id: PBO:0039086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP/GTP binding carboxypeptidase 1","termid":"PBO:0039086"}


id: PBO:0067387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 492, pseudogene","termid":"PBO:0067387"}


id: MONDO:0024581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0024581 (obsolete MONDO:0024581)","termid":"MONDO:0024581","xrefs":{"Monarch":{"xref_id":"0024581"}}}


id: PBO:0089468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex subunit B, Pcf2","termid":"PBO:0089468"}


id: PBO:0041764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 3","termid":"PBO:0041764"}


id: GO:0021974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body in spinal cord towards target cells in the thalamus. This axonal process is a member of those that make up the trigeminothalamic tract, one of the major routes of nociceptive and temperature signaling from the face.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:jid","ISBN:0878937420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminothalamic tract morphogenesis","termid":"GO:0021974"}


id: GO:0097733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialised 9+0 non-motile cilium found in photoreceptor cells. A ciliary transition zone called 'photoreceptor connecting cilium' links the photoreceptor outer segment to the inner segment.","definition_xrefs":["Wikipedia:Photoreceptor_cell#Histology","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"is_a","term_name":"9+0 non-motile cilium","termid":"GO:0097731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor cell cilium","synonyms":[{"name":"photoreceptor cilium","type":"exact"}],"termid":"GO:0097733"}


id: PBO:0068206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 513","termid":"PBO:0068206"}


id: GO:0060857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the glial barrier between the blood and the brain. The glial cells in the brain are packed tightly together preventing the passage of most molecules from the blood into the brain. Only lipid soluble molecules or those that are actively transported can pass through the blood-brain barrier.","definition_xrefs":["GOC:dph","PMID:20080302","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"is_a","term_name":"establishment of blood-brain barrier","termid":"GO:0060856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of glial blood-brain barrier","synonyms":[{"name":"establishment of glial BBB","type":"exact"},{"name":"establishment of glial blood/brain barrier","type":"exact"}],"termid":"GO:0060857"}


id: PBO:0004007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer epsilon subunit (predicted)","termid":"PBO:0004007"}


id: PBO:0087752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the transmembrane ring of the nuclear pore complex (NPC); contributes to nucleocytoplasmic transport, NPC biogenesis and spindle pole body duplication; homologous to human NDC1","termid":"PBO:0087752"}


id: GO:0045794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases cell volume.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell volume homeostasis","termid":"GO:0006884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell volume","synonyms":[{"name":"RVD","type":"related"},{"name":"cell regulatory volume decrease","type":"related"}],"termid":"GO:0045794"}


id: MONDO:0005140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm originating from the surface ovarian epithelium. It accounts for the greatest number of deaths from malignancies of the female genital tract and is the fifth leading cause of cancer fatalities in women. It is predominantly a disease of older white women of northern European extraction, but it is seen in all ages and ethnic groups. Adenocarcinomas constitute the vast majority of ovarian carcinomas. The pattern of metastatic spread in ovarian carcinoma is similar regardless of the microscopic type. The most common sites of involvement are the contralateral ovary, peritoneal cavity, para-aortic and pelvic lymph nodes, and liver. Lung and pleura are the most common sites of extra-abdominal spread. The primary form of therapy is surgical. The overall prognosis of ovarian carcinoma remains poor, a direct result of its rapid growth rate and the lack of early symptoms. --2002","definition_xrefs":["NCIT:C4908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant epithelial tumor of ovary","termid":"MONDO:0018364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian carcinoma","secondary_identifiers":["DOID:4001","MEDGEN:1648335","EFO:0001075","UMLS:C4721610"],"synonyms":[{"name":"carcinoma of ovary","type":"exact"},{"name":"carcinoma of the ovary","type":"exact"},{"name":"epithelial ovarian cancer","type":"exact"},{"name":"ovarian cancer","type":"broad"},{"name":"ovarian carcinoma","type":"exact"},{"name":"ovarian epithelial cancer","type":"broad"},{"name":"ovary carcinoma","type":"exact"}],"termid":"MONDO:0005140","xrefs":{"Monarch":{"xref_id":"0005140"}}}


id: FYPO:0000949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell does not contain a septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"},{"relation_name":"output_of","term_name":"abolished septum assembly","termid":"FYPO:0000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000032","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"aseptate","synonyms":[{"name":"absent septum","type":"exact"},{"name":"aseptate during mitotic cell cycle","type":"related"},{"name":"aseptate during vegetative growth","type":"exact"}],"termid":"FYPO:0000949"}


id: MONDO:0002548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of schwannoma characterized by hypercellularity, Antoni A pattern, and the absence of well-formed Verocay bodies.","definition_xrefs":["NCIT:C4724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular schwannoma","secondary_identifiers":["ONCOTREE:CSCHW","MEDGEN:98124","ICD9:215.9","UMLS:C0431124","SCTID:404026003","DOID:3196"],"synonyms":[{"name":"CSCHW","type":"related"},{"name":"cellular neurilemmoma","type":"exact"},{"name":"cellular neurinoma","type":"exact"},{"name":"cellular schwannoma","type":"exact"}],"termid":"MONDO:0002548","xrefs":{"Monarch":{"xref_id":"0002548"}}}


id: GO:1903013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:22365144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to differentiation-inducing factor 1","synonyms":[{"name":"DIF-1","type":"related"},{"name":"response to 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one","type":"exact"},{"name":"response to DIF-1","type":"related"},{"name":"response to DIF1","type":"related"}],"termid":"GO:1903013"}


id: PBO:0064977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 33","termid":"PBO:0064977"}


id: PBO:0001339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF185 protein, mitochondrial","termid":"PBO:0001339"}


id: GO:0047531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxoglutarate + ornithine = 5-amino-2-oxopentanoate + L-glutamate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,5-diaminovalerate transaminase activity (obsolete GO:0047531)","synonyms":[{"name":"2,5-diaminovalerate aminotransferase activity","type":"exact"}],"termid":"GO:0047531"}


id: PBO:0090773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endomembrane system protein, FAR-17a/AIG1-like family protein, human AIG1 and ADTRP ortholog","termid":"PBO:0090773"}


id: PBO:0061762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-5' oligoadenylate synthetase like 2, pseudogene","termid":"PBO:0061762"}


id: PBO:0060602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-SMC condensin I complex subunit G pseudogene 2","termid":"PBO:0060602"}


id: GO:0048197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of priming complexes to form a coat on a Golgi membrane. Priming complexes associate laterally and additional coat proteins are recruited from the cytosol to the forming coat. Cargo proteins diffuse into the budding site and become trapped by their interactions with the coat.","definition_xrefs":["ISBN:0716731363","PMID:10219233","GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"Golgi transport vesicle coating","termid":"GO:0048200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0006810","GO:0016192","GO:0065003","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"Golgi membrane coat protein complex assembly","synonyms":[{"name":"Golgi apparatus membrane coat protein complex assembly","type":"exact"},{"name":"Golgi membrane bud coat oligomerisation","type":"narrow"},{"name":"dictyosome membrane binding by cytosolic coat proteins","type":"narrow"},{"name":"dictyosome membrane bud coat oligomerisation","type":"narrow"}],"termid":"GO:0048197"}


id: GO:0034822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: citronellal + NAD+ + OH- = citronellate + NADH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete citronellal dehydrogenase activity (obsolete GO:0034822)","termid":"GO:0034822"}


id: PBO:0067594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 756, pseudogene","termid":"PBO:0067594"}


id: MONDO:0008763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multisystemic disorder characterized by cone-rod dystrophy, hearing loss, obesity, insulin resistance and hyperinsulinemia, type 2 diabetes mellitus, dilated cardiomyopathy (DCM), and progressive hepatic and renal dysfunction.","definition_xrefs":["Orphanet:64"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"excluded_subClassOf","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic retinitis pigmentosa (obsolete MONDO:0020240)","termid":"MONDO:0020240"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Alstrom syndrome","secondary_identifiers":["SCTID:63702009","MEDGEN:78675","NCIT:C84549","DOID:0050473","MedDRA:10068783","GARD:5787","OMIM:203800","UMLS:C0268425","ICD9:759.89","MESH:D056769"],"synonyms":[{"name":"ALMS","type":"exact"},{"name":"ALSS","type":"exact"},{"name":"Alstrom syndrome","type":"exact"},{"name":"Alstrom's syndrome","type":"exact"},{"name":"Alström Syndrome","type":"exact"},{"name":"Alström syndrome","type":"exact"}],"termid":"MONDO:0008763","xrefs":{"Monarch":{"xref_id":"0008763"}}}


id: PATO:0001525
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sound frequency in the range of 20 to 20.000 Hz.","direct_ancestors":[{"relation_name":"is_a","term_name":"sound frequency","termid":"PATO:0001520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sonic","termid":"PATO:0001525"}


id: PBO:0113269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phospholipid hydroperoxide glutathione peroxidase; late-acting antioxidant system that decreases mitochondrial ROS production and preserves electron transport chain (ETC) function; protects cells from phospholipid hydroperoxides and nonphospholipid peroxides during oxidative stress; induced by glucose starvation; protein abundance increases in response to DNA replication stress","termid":"PBO:0113269"}


id: PBO:0048244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 12E","termid":"PBO:0048244"}


id: PBO:0026760
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation_during_cellular_response_to_UV","termid":"PBO:0026760"}


id: MONDO:0007652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare premalignant hyperproliferative gastropathy characterized by massive overgrowth of foveolar cells in the gastric lining, resulting in large gastric folds, and manifesting with epigastric pain, nausea, vomiting, peripheral edema and, less commonly, anorexia and weight loss.","definition_xrefs":["Orphanet:2494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric mucosal hypertrophy","secondary_identifiers":["SCTID:60002000","ICD9:535.2","ICD9:535.21","GARD:2436","NCIT:C67277","EFO:1000946","DOID:8757","MedDRA:10017807","MedDRA:10017868","OMIM:137280","UMLS:C0017155","ICD9:535.20","MESH:D005758","icd11.foundation:1343994188","MEDGEN:4844"],"synonyms":[{"name":"MENETRIER disease","type":"exact"},{"name":"Menetrier Disease","type":"exact"},{"name":"Menetrier disease","type":"exact"},{"name":"Menetrier's disease","type":"exact"},{"name":"Ménétrier disease","type":"exact"},{"name":"familial giant hypertrophic gastritis","type":"exact"},{"name":"gastritis, familial giant hypertrophic","type":"related"},{"name":"gastroenteropathy, protein losing","type":"related"},{"name":"giant hypertrophic gastritis","type":"exact"},{"name":"giant hypertrophic gastropathy","type":"related"},{"name":"giant hypertrophy of the gastric mucosa","type":"related"},{"name":"giant rugal hypertrophy of stomach","type":"exact"},{"name":"hypertrophic gastritis","type":"exact"},{"name":"hypertrophic gastropathy","type":"exact"},{"name":"hypoproteinemic hypertrophic gastropathy","type":"exact"}],"termid":"MONDO:0007652","xrefs":{"Monarch":{"xref_id":"0007652"}}}


id: MONDO:0014669
data:
  {"annotated_genes":["SJAG_04225"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85422],"is_not":false,"summary":null,"term":"MONDO:0014669"}]},"cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the DRAM2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04225":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 21","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616502","DOID:0081447","GARD:16125","MEDGEN:891534","UMLS:C4049066"],"synonyms":[{"name":"CORD21","type":"related"},{"name":"DRAM2 cone-rod dystrophy","type":"exact"},{"name":"cone-rod dystrophy 21","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in DRAM2","type":"exact"},{"name":"cone-rod dystrophy type 21","type":"exact"},{"name":"retinal dystrophy with early macular involvement","type":"related"}],"termid":"MONDO:0014669","terms_by_termid":{"MONDO:0014669":null},"xrefs":{"Monarch":{"xref_id":"0014669"}}}


id: MONDO:0014860
data:
  {"annotated_genes":["SJAG_00175"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86398],"is_not":false,"summary":null,"term":"MONDO:0014860"}]},"cv_name":"mondo","definition":"Any polycystic kidney disease in which the cause of the disease is a mutation in the SEC63 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"polycystic liver disease 1","termid":"MONDO:0008265"},{"relation_name":"is_a","term_name":"autosomal dominant polycystic liver disease","termid":"MONDO:0000447"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0000426","MONDO:0004335"],"is_obsolete":false,"name":"polycystic liver disease 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060975","MEDGEN:934736","OMIM:617004","UMLS:C4310769","GARD:16174"],"synonyms":[{"name":"PCLD2","type":"exact"},{"name":"polycystic liver disease 2","type":"exact"},{"name":"polycystic liver disease 2 with or without kidney cysts","type":"related"},{"name":"polycystic liver disease 2; PCLD2","type":"exact"},{"name":"polycystic liver disease type 2","type":"exact"}],"termid":"MONDO:0014860","terms_by_termid":{"MONDO:0014860":null},"xrefs":{"Monarch":{"xref_id":"0014860"}}}


id: MONDO:0000118
data:
  {"annotated_genes":["SJAG_04380"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007483"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin pigmentation disorder","termid":"MONDO:0019288"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"reticulate pigment disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:179850"],"synonyms":[{"name":"reticulate pigment disorders","type":"exact"}],"termid":"MONDO:0000118","terms_by_termid":{"MONDO:0007483":null},"xrefs":{"Monarch":{"xref_id":"0000118"}}}


id: PBO:0061999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily G member 2","termid":"PBO:0061999"}


id: MONDO:1012730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital malformation syndrome presenting with unilateral craniofacial abnormalities that occurs in cats.","definition_xrefs":["PMID:22610383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemifacial microsomia, domestic cat","secondary_identifiers":["OMIA:001690-9685"],"synonyms":[{"name":"type III hemifacial microsomia, domestic cat","type":"related"}],"termid":"MONDO:1012730","xrefs":{"Monarch":{"xref_id":"1012730"}}}


id: GO:1990557
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88735],"is_not":false,"summary":null,"term":"GO:1990557"}]},"cv_name":"biological_process","definition":"The process in which sulfate is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:10428783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate transmembrane transport","termid":"GO:1902358"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"mitochondrial sulfate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990557","terms_by_termid":{"GO:1990557":null}}


id: PBO:0038434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylacetamide deacetylase","termid":"PBO:0038434"}


id: PBO:0027365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_stubby_mononucleate_vegetative_cell","termid":"PBO:0027365"}


id: MONDO:0015615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic gastroenterological disease (obsolete MONDO:0015615)","secondary_identifiers":["Orphanet:165652"],"synonyms":[{"name":"rare genetic gastrointestinal system disease","type":"exact"}],"termid":"MONDO:0015615","xrefs":{"Monarch":{"xref_id":"0015615"}}}


id: MONDO:0007473
data:
  {"annotated_genes":["SJAG_01114","SJAG_04765","SJAG_02278","SJAG_04522"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85705,85708,85707,85706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011444"}]},"cv_name":"mondo","definition":"Duane retraction syndrome (DRS) is a congenital form of strabismus characterized by horizontal eye movement limitation, globe retraction and palpebral fissure narrowing in attempted adduction. It is caused by a failure of development of the abducens nerve and can lead to amblyopia.","definition_xrefs":["Orphanet:233"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"strabismus","termid":"MONDO:0003432"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"nuclear oculomotor paralysis","termid":"MONDO:0015083"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01114":null,"SJAG_02278":null,"SJAG_04522":null,"SJAG_04765":null},"genotype_count":0,"is_obsolete":false,"name":"Duane retraction syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D004370","SCTID:60318001","DOID:12557","UMLS:C0013261","OMIMPS:126800","MedDRA:10013799","GARD:6288","NCIT:C84678","MEDGEN:4413","ICD9:378.71"],"synonyms":[{"name":"DRS","type":"exact"},{"name":"DURS","type":"exact"},{"name":"Duane anomaly","type":"related"},{"name":"Duane retraction syndrome","type":"exact"},{"name":"Duane syndrome","type":"exact"},{"name":"Duane's syndrome","type":"exact"},{"name":"Stilling-Turk-Duane syndrome","type":"exact"},{"name":"retraction syndrome","type":"related"}],"termid":"MONDO:0007473","terms_by_termid":{"MONDO:0011444":null},"xrefs":{"Monarch":{"xref_id":"0007473"}}}


id: PBO:0057228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 383","termid":"PBO:0057228"}


id: PBO:0069112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 361, pseudogene","termid":"PBO:0069112"}


id: GO:1902253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway by p53 class mediator.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:mtg_apoptosis","GOC:rl","PMID:15705871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:0072332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of intrinsic apoptotic signaling pathway by p53 class mediator","synonyms":[{"name":"regulation of intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"exact"},{"name":"regulation of signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902253"}


id: PBO:0049663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 histone pseudogene 1","termid":"PBO:0049663"}


id: PBO:0051137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-11","termid":"PBO:0051137"}


id: GO:0033061
data:
  {"annotated_genes":["SJAG_03221","SJAG_01708","SJAG_00757","SJAG_02708"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033063"},{"annotations":[93002,78893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033065"},{"annotations":[108019,110666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032798"}]},"cv_name":"cellular_component","definition":"A protein complex containing accessory proteins which bind a recombinase (e.g. Rad51) and bind single-stranded DNA (ssDNA), and promote nucleation of the recombinase onto ssDNA through facilitating recombinase-RPA exchange.","definition_xrefs":["GOC:elh","GOC:mah","InterPro:IPR003488","PMID:12912992","GOC:vw","PMID:32414915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01708":null,"SJAG_02708":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA recombinase mediator complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033061","terms_by_termid":{"GO:0032798":null,"GO:0033063":null,"GO:0033065":null}}


id: PBO:0078794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 16-1","termid":"PBO:0078794"}


id: GO:0060841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the venous blood vessel over time from its initial formation to the mature structure. Venous blood vessels carry blood back to the heart after the capillary bed.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venous blood vessel development","termid":"GO:0060841"}


id: PR:P87052
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 10 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.04","synonyms":[{"name":"Spom972h-mug10","type":"exact"}],"termid":"PR:P87052"}


id: FYPO:0004631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during anaphase of the first meiotic nuclear division is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during meiosis I","termid":"FYPO:0004938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during meiotic anaphase I","synonyms":[{"name":"decreased protein accumulation during meiotic anaphase I","type":"related"},{"name":"decreased protein level during anaphase of first meiotic nuclear division","type":"exact"},{"name":"reduced protein level during meiotic anaphase I","type":"exact"}],"termid":"FYPO:0004631"}


id: MONDO:0016831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"linear verrucous nevus syndrome","secondary_identifiers":["MEDGEN:1806291","UMLS:C5679838","GARD:3259","Orphanet:2611"],"synonyms":[{"name":"linear hamartoma syndrome","type":"exact"}],"termid":"MONDO:0016831","xrefs":{"Monarch":{"xref_id":"0016831"}}}


id: MOD:01332
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to 6x(13)C labeled L-leucine.","definition_xrefs":["Unimod:188#L","PubMed:12716131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-leucine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"}],"termid":"MOD:01332"}


id: PBO:0108979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPMIP3 pseudogene 1","termid":"PBO:0108979"}


id: GO:0006634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hexadecanal, the C16 straight chain aldehyde.","direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"hexadecanal metabolic process","termid":"GO:0046458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hexadecanal biosynthetic process","synonyms":[{"name":"hexadecanal anabolism","type":"exact"},{"name":"hexadecanal biosynthesis","type":"exact"},{"name":"hexadecanal formation","type":"exact"},{"name":"hexadecanal synthesis","type":"exact"},{"name":"palmitaldehyde biosynthesis","type":"exact"},{"name":"palmitaldehyde biosynthetic process","type":"exact"}],"termid":"GO:0006634"}


id: GO:0030058
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043799"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an aliphatic amine + an acceptor (A) + H2O = an aldehyde + a reduced acceptor (AH2) + NH4+.","definition_xrefs":["RHEA:51128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aliphatic amine dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MADH activity","type":"related"},{"name":"amine dehydrogenase activity","type":"broad"},{"name":"amine: (acceptor) oxidoreductase (deaminating)","type":"related"},{"name":"methylamine dehydrogenase activity","type":"related"},{"name":"primary-amine dehydrogenase activity","type":"broad"},{"name":"primary-amine:acceptor oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0030058","terms_by_termid":{"GO:0043799":null}}


id: GO:0000719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The repair of UV-induced T-T, C-T and C-C dimers by directly reversing the damage to restore the original pyrimidines.","definition_xrefs":["GOC:elh","PMID:10915863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine dimer repair","termid":"GO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"photoreactive repair","synonyms":[{"name":"pyrimidine-dimer repair by photolyase","type":"narrow"}],"termid":"GO:0000719"}


id: PBO:0028200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_DNA_damage_checkpoint_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028200"}


id: PBO:0065498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone 4","termid":"PBO:0065498"}


id: GO:0097548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled shedding of a seed.","definition_xrefs":["GOC:lmo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscission","termid":"GO:0009838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed abscission","termid":"GO:0097548"}


id: PBO:0012557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 5","termid":"PBO:0012557"}


id: MONDO:0859763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibromatosis/schwannomatosis","termid":"MONDO:0859008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic neurofibromatosis type 1","secondary_identifiers":["Orphanet:634461","MEDGEN:1843428","UMLS:C5782097"],"termid":"MONDO:0859763","xrefs":{"Monarch":{"xref_id":"0859763"}}}


id: MONDO:0030535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 2d, generalized, intermediate or severe, autosomal recessive","secondary_identifiers":["MEDGEN:1794224","OMIM:619599","UMLS:C5562014"],"synonyms":[{"name":"EBS2D","type":"exact"}],"termid":"MONDO:0030535","xrefs":{"Monarch":{"xref_id":"0030535"}}}


id: MONDO:1010623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Situs inversus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"situs inversus, non-human animal","termid":"MONDO:1010068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"situs inversus, horse","secondary_identifiers":["OMIA:001102-9796"],"termid":"MONDO:1010623","xrefs":{"Monarch":{"xref_id":"1010623"}}}


id: GO:0071339
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that can methylate lysine-4 of histone H3. MLL1/MLL is the catalytic methyltransferase subunit, and the complex also contains the core components ASH2L, HCFC1/HCF1 WDR5 and RBBP5.","definition_xrefs":["GOC:sp","PMID:15960975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MLL1/2 complex","termid":"GO:0044665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005654","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"MLL1 complex","termid":"GO:0071339"}


id: GO:2000596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of optic nerve formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of optic nerve formation","termid":"GO:2000595"},{"relation_name":"negatively_regulates","term_name":"optic nerve formation","termid":"GO:0021634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of optic nerve formation","synonyms":[{"name":"negative regulation of CN II biosynthesis","type":"related"},{"name":"negative regulation of CN II formation","type":"related"}],"termid":"GO:2000596"}


id: GO:0010667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or extent of cardiac cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a cardiac muscle cell and result in its death.","definition_xrefs":["GOC:mtg_apoptosis","GOC:tb","GOC:BHF","GOC:dph","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell apoptotic process","termid":"GO:0010664"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell apoptotic process","termid":"GO:0010665"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell apoptotic process","termid":"GO:0010659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle cell apoptotic process","synonyms":[{"name":"down regulation of cardiac muscle cell apoptosis","type":"exact"},{"name":"down-regulation of cardiac muscle cell apoptosis","type":"exact"},{"name":"downregulation of cardiac muscle cell apoptosis","type":"exact"},{"name":"inhibition of cardiac muscle cell apoptosis","type":"narrow"},{"name":"negative regulation of cardiac muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010667"}


id: PBO:0070539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 5","termid":"PBO:0070539"}


id: FYECO:0000249
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which copper(II) sulfate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CuSO4","synonyms":[{"name":"+ copper(II) sulfate","type":"exact"}],"termid":"FYECO:0000249"}


id: GO:0071216
data:
  {"annotated_genes":["SJAG_01805","SJAG_04332","SJAG_04140","SJAG_03048","SJAG_01837","SJAG_04183","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90324,117068,111578,102722,94135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[104500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[102733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[102734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[102735,94879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"},{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to biotic stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to biotic stress","type":"narrow"}],"termid":"GO:0071216","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0140429":null,"GO:1990820":null}}


id: SO:0001974
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcription factor binding site with consensus sequence CCGCGNGGNGGCAG, bound by CCCTF-binding factor.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTCF_binding_site","synonyms":[{"name":"CCCTF binding site","type":"exact"},{"name":"CTCF binding site","type":"exact"}],"termid":"SO:0001974"}


id: GO:0018269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-serine ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a seryl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0162"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI anchor biosynthetic process via N-seryl-glycosylphosphatidylinositolethanolamine (obsolete GO:0018269)","termid":"GO:0018269"}


id: PBO:0002078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2-oxoadipate and 2-oxoglutarate transporter (predicted)","termid":"PBO:0002078"}


id: PBO:0070841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 20","termid":"PBO:0070841"}


id: GO:0072326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a nematode vulval cell regardless of its environment; upon determination, the cell fate cannot be reversed. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed adult vulva, which is the egg-laying organ of female and hermaphrodite nematodes.","definition_xrefs":["GOC:mah","ISBN:087969307X","PMID:11236714","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"vulval cell fate commitment","termid":"GO:0072325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vulval cell fate determination","termid":"GO:0072326"}


id: MONDO:0001167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of cerebral palsy characterized by spasticity and hypertonia of the lower extremities bilaterally, particularly the legs, hips, and pelvis; this is the most common (70%) form of cerebral palsy.","definition_xrefs":["NCIT:C34781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spastic cerebral palsy","termid":"MONDO:0000396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic diplegia","secondary_identifiers":["SCTID:58193001","MESH:C537945","MEDGEN:124371","SCTID:281411007","UMLS:C0270804","MONDO:0022698","DOID:10965","ICD9:343.0"],"synonyms":[{"name":"Little disease","type":"exact"},{"name":"Little's disease","type":"exact"},{"name":"cerebral palsy spastic diplegic","type":"related"},{"name":"cerebral spastic infantile paralysis","type":"exact"},{"name":"diplegic infantile cerebral palsy","type":"exact"},{"name":"infantile diplegic cerebral palsy","type":"exact"},{"name":"infantile spastic cerebral palsy","type":"exact"}],"termid":"MONDO:0001167","xrefs":{"Monarch":{"xref_id":"0001167"}}}


id: MONDO:0004021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that arises from the mediastinum. Representative examples include mediastinal (thymic) large B-cell lymphoma and Hodgkin lymphoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"mediastinal cancer","termid":"MONDO:0005843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"mediastinal malignant lymphoma","secondary_identifiers":["DOID:6868","MEDGEN:235311","UMLS:C1334665","NCIT:C6633"],"synonyms":[{"name":"lymphoma of mediastinum","type":"exact"},{"name":"lymphoma of the mediastinum","type":"exact"},{"name":"mediastinal lymphoma","type":"exact"},{"name":"mediastinal malignant lymphoma","type":"exact"},{"name":"mediastinum lymphoma","type":"exact"},{"name":"primary mediastinal lymphoma","type":"exact"}],"termid":"MONDO:0004021","xrefs":{"Monarch":{"xref_id":"0004021"}}}


id: PBO:0089514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP Rga2","termid":"PBO:0089514"}


id: GO:0048901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior lateral line neuromast over time, from its formation to the mature structure. The neuromast is the sensory receptor of the anterior lateral line system and is composed of a population of sensory hair cells, and nonsensory supporting cells and mantle cells. Neuromast are located superficially on the epithelium or in lateral line canals.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast development","termid":"GO:0048884"},{"relation_name":"part_of","term_name":"anterior lateral line development","termid":"GO:0048899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast development","termid":"GO:0048901"}


id: SO:0001981
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An orientation dependent regulatory promoter element, with consensus sequence of TTGCACAN4TTGCACA, found in plants.","definition_xrefs":["SO:ml","PMID:2902624","PMID:17381552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_promoter_element","termid":"SO:0001678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L_box","synonyms":[{"name":"L-box","type":"exact"},{"name":"L-box promoter element","type":"exact"}],"termid":"SO:0001981"}


id: PBO:0113313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in proteolytic activation of Rim101p; part of response to alkaline pH; PalA/AIP1/Alix family member; interaction with the ESCRT-III subunit Snf7p suggests a relationship between pH response and multivesicular body formation; localizes to cytosol, nucleus and peroxisomes","termid":"PBO:0113313"}


id: PBO:0064066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 100","termid":"PBO:0064066"}


id: PBO:0045481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmocollin 3","termid":"PBO:0045481"}


id: PBO:0082635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of eisosome required for proper eisosome assembly; precedes Pil1p/Lsp1p during eisosome formation, controls eisosome length and shape; diffusely distributed, forms heterogeneous patches at plasma membrane in small buds, also found in medium and large buds; expression repressed by cAMP; similar to A. gossypii SEG gene and to S. pombe Sle1p, important for generating eisosomes; SEG1 has a paralog, SEG2, that arose from the whole genome duplication","termid":"PBO:0082635"}


id: PR:O14099
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2F3.16 gene.","definition_xrefs":["UniProtKB:O14099","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C2F3.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.16","synonyms":[{"name":"Spom972h-SPAC2F3.16","type":"exact"}],"termid":"PR:O14099"}


id: GO:0009280
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. In Gram-negative bacteria the membrane that separates the cytoplasm from the murein sacculus.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete cell wall inner membrane (obsolete GO:0009280)","synonyms":[{"name":"cell wall inner membrane","type":"exact"},{"name":"cytoplasmic membrane","type":"broad"}],"termid":"GO:0009280"}


id: PBO:0047484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin 1","termid":"PBO:0047484"}


id: PBO:0061366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 26","termid":"PBO:0061366"}


id: PBO:0077121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMMDC1 divergent transcript","termid":"PBO:0077121"}


id: PBO:0068044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 349","termid":"PBO:0068044"}


id: MONDO:0013276
data:
  {"annotated_genes":["SJAG_04810"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86515],"is_not":false,"summary":null,"term":"MONDO:0013276"}]},"cv_name":"mondo","definition":"An autoimmune disorder characterized by the association of primary biliary cirrhosis (PBC) with limited cutaneous systemic sclerosis (lcSSc).","definition_xrefs":["Orphanet:779"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Reynolds syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1409844299","GARD:4697","MEDGEN:450547","OMIM:613471","UMLS:C0748397","SCTID:715401008"],"synonyms":[{"name":"Reynolds syndrome","type":"exact"},{"name":"primary biliary cirrhosis and systemic scleroderma","type":"exact"},{"name":"primary biliary cirrhosis, Scleroderma, Raynaud disease, and telangiectasia","type":"related"}],"termid":"MONDO:0013276","terms_by_termid":{"MONDO:0013276":null},"xrefs":{"Monarch":{"xref_id":"0013276"}}}


id: MONDO:0800275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 14a","secondary_identifiers":["MEDGEN:765405","UMLS:C3552491"],"synonyms":[{"name":"AUTS14A","type":"exact"}],"termid":"MONDO:0800275","xrefs":{"Monarch":{"xref_id":"0800275"}}}


id: PBO:0053308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIN28B antisense RNA 1","termid":"PBO:0053308"}


id: GO:1903880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 17alpha-hydroxyprogesterone.","definition_xrefs":["GOC:mr","PMID:10802282","GO_REF:0000067","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"17alpha-hydroxyprogesterone binding","termid":"GO:1903880"}


id: GO:0035853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein complex localization that acts on a chromosome passenger complex; as a result, the complex is transported to, or maintained in, a specific location at the spindle midzone. A chromosome passenger complex is a protein complex that contains the BIR-domain-containing protein Survivin, Aurora B kinase, INCENP and Borealin, and coordinates various events based on its location to different structures during the course of mitosis. The spindle midzone is the area in the center of the spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["PMID:15296749","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein localization to cytoskeleton","termid":"GO:0044380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"chromosome passenger complex localization to spindle midzone","synonyms":[{"name":"CPC complex localization to spindle midzone","type":"exact"},{"name":"CPC localization to spindle midzone","type":"exact"},{"name":"chromosomal passenger complex localization to spindle midzone","type":"exact"},{"name":"chromosome passenger complex localisation to spindle midzone","type":"exact"},{"name":"chromosome passenger complex localization to central spindle","type":"exact"},{"name":"chromosome passenger complex localization to spindle equator","type":"exact"}],"termid":"GO:0035853"}


id: MONDO:1012958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atactic disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atactic disorder, non-human animal","termid":"MONDO:1012958","xrefs":{"Monarch":{"xref_id":"1012958"}}}


id: GO:0051136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer T cell differentiation.","definition_xrefs":["PMID:9133426","ISBN:0781735149","PMID:12154375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell differentiation","termid":"GO:0046637"},{"relation_name":"regulates","term_name":"NK T cell differentiation","termid":"GO:0001865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of NK T cell differentiation","synonyms":[{"name":"regulation of NK T cell development","type":"related"},{"name":"regulation of NK T lymphocyte differentiation","type":"exact"},{"name":"regulation of NK T-cell differentiation","type":"exact"},{"name":"regulation of NK T-lymphocyte differentiation","type":"exact"},{"name":"regulation of NKT cell differentiation","type":"exact"},{"name":"regulation of NT cell differentiation","type":"exact"},{"name":"regulation of natural T cell differentiation","type":"exact"},{"name":"regulation of natural killer T cell differentiation","type":"exact"}],"termid":"GO:0051136"}


id: SO:0000871
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that is polyadenylated.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"adjacent_to","term_name":"polyA_sequence","termid":"SO:0000610"},{"relation_name":"has_quality","term_name":"polyadenylated","termid":"SO:0000246"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyadenylated_mRNA","synonyms":[{"name":"polyadenylated mRNA","type":"exact"}],"termid":"SO:0000871"}


id: GO:0019727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-mevalonate + NAD+ = H+ + mevaldate + NADH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mevaldate reductase (NADH) activity (obsolete GO:0019727)","termid":"GO:0019727"}


id: MONDO:0001522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by a fascination with fire and recurrent episodes of fire setting during which the individual experiences a rising subjective sense of tension before the fire setting and a sense of gratification or relief when setting the fire. There is no ulterior motive (such as monetary gain or the expression of political ideology) to the fire setting.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"impulse control disorder","termid":"MONDO:0001162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyromania","secondary_identifiers":["NCIT:C94334","icd11.foundation:1532500290","SCTID:600009","MEDGEN:42028","ICD9:312.33","MESH:D005391","UMLS:C0016142","DOID:12402","ICD10CM:F63.1"],"synonyms":[{"name":"firesetting behavior","type":"exact"},{"name":"firesetting behaviour","type":"exact"},{"name":"pathological firesetting","type":"exact"}],"termid":"MONDO:0001522","xrefs":{"Monarch":{"xref_id":"0001522"}}}


id: FYPO:0003086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal chromatin binding","termid":"FYPO:0003086"}


id: GO:0070671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-12 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-12","synonyms":[{"name":"response to IL-12","type":"exact"}],"termid":"GO:0070671"}


id: GO:1903045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any neural crest cell migration that is involved in sympathetic nervous system development.","definition_xrefs":["PMID:19325129","GO_REF:0000060","GOC:BHF","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell migration involved in autonomic nervous system development","termid":"GO:1901166"},{"relation_name":"part_of","term_name":"sympathetic nervous system development","termid":"GO:0048485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell migration involved in sympathetic nervous system development","termid":"GO:1903045"}


id: GO:0035804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of an egg coat. An egg coat is a specialized extracellular matrix that surrounds the ovum of animals. The egg coat provides structural support and can play an essential role in oogenesis, fertilization and early development.","definition_xrefs":["PMID:17163408","PMID:16944418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of egg coat","synonyms":[{"name":"structural constituent of vitelline envelope","type":"narrow"},{"name":"structural constituent of zona pellucida","type":"narrow"}],"termid":"GO:0035804"}


id: PBO:0052828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 128, pseudogene","termid":"PBO:0052828"}


id: PBO:0031495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_oxidative_stress","termid":"PBO:0031495"}


id: GO:0048942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a glial cell in the posterior lateral line nerve are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a glial cell in the posterior lateral line nerve.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048938"},{"relation_name":"part_of","term_name":"posterior lateral line nerve glial cell development","termid":"GO:0048941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048942"}


id: PBO:0083761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential kinetochore protein; component of the CBF3 complex that binds the CDEIII region of the centromere; contains an N-terminal Zn2Cys6 type zinc finger domain, a C-terminal acidic domain, and a putative coiled coil dimerization domain","termid":"PBO:0083761"}


id: MONDO:0800305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary myelofibrosis","termid":"MONDO:0009692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0002280","MONDO:0004992"],"is_obsolete":false,"name":"myelofibrosis with myeloid metaplasia","secondary_identifiers":["icd11.foundation:673220507"],"synonyms":[{"name":"MMM","type":"exact"}],"termid":"MONDO:0800305","xrefs":{"Monarch":{"xref_id":"0800305"}}}


id: MONDO:0007275
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020730"}]},"cv_name":"mondo","definition":"Entrapment of the median nerve in the wrist that is characterized by numbness, tingling and painful movement.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"nerve compression syndrome","termid":"MONDO:0003615"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"carpal tunnel syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0004143","UMLS:C0007286","NCIT:C34450","icd11.foundation:1275186848","ICD9:354.0","DOID:12169","ICD10CM:G56.0","MEDGEN:2856","SCTID:57406009","MESH:D002349","Orphanet:50838","OMIMPS:115430"],"synonyms":[{"name":"CTS","type":"related"},{"name":"CTS - carpal tunnel syndrome","type":"exact"},{"name":"amyotrophy, thenar, of carpal origin","type":"related"},{"name":"carpal tunnel median neuropathy","type":"exact"},{"name":"carpal tunnel syndrome","type":"exact"},{"name":"median nerve entrapment","type":"exact"}],"termid":"MONDO:0007275","terms_by_termid":{"MONDO:0020730":null},"xrefs":{"Monarch":{"xref_id":"0007275"}}}


id: FYPO:0006540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which actin cytoskeleton organization is abnormal during a cellular response to pheromone.","definition_xrefs":["PomBase:mah","GO:0030036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization","termid":"FYPO:0004803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cytoskeleton organization during cellular response to pheromone","synonyms":[{"name":"abnormal actin cytoskeleton organisation during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0006540"}


id: PBO:0057269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR493 cluster host gene","termid":"PBO:0057269"}


id: PBO:0081708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 628","termid":"PBO:0081708"}


id: GO:0060718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells of the ectoplacental cone acquire specialized structural and/or functional features that characterize chorionic trophoblasts. These cells will migrate towards the spongiotrophoblast layer and give rise to syncytiotrophoblasts of the labyrinthine layer.","definition_xrefs":["PMID:16983341","CL:0011101","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"chorion development","termid":"GO:0060717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorionic trophoblast cell differentiation","termid":"GO:0060718"}


id: PBO:0044355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 42","termid":"PBO:0044355"}


id: GO:0075258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of teliospore formation, which is the formation of a thick-walled resting or overwintering spore produced by the rust fungi (Uredinales) and smut fungi (Ustilaginales) in which karyogamy occurs.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043944"},{"relation_name":"is_a","term_name":"regulation of teliospore formation","termid":"GO:0075256"},{"relation_name":"negatively_regulates","term_name":"teliospore formation","termid":"GO:0075255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of teliospore formation","termid":"GO:0075258"}


id: GO:0090720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adaptive immune response against an antigen not previously encountered by immune system.","definition_xrefs":["PMID:26831526","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response","termid":"GO:0002250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary adaptive immune response","termid":"GO:0090720"}


id: PBO:0054136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1502","termid":"PBO:0054136"}


id: MONDO:0018347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete severe intellectual disability-progressive postnatal microcephaly- midline stereotypic hand movements syndrome (obsolete MONDO:0018347)","termid":"MONDO:0018347","xrefs":{"Monarch":{"xref_id":"0018347"}}}


id: PBO:0052988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactalbumin alpha","termid":"PBO:0052988"}


id: PBO:0031208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_activation_of_bipolar_cell_growth","termid":"PBO:0031208"}


id: GO:0000452
data:
  {"annotated_genes":["SJAG_02350","SJAG_00943","SJAG_02377","SJAG_00744","SJAG_03410"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94457,99126,108459,110570,111724],"is_not":false,"summary":null,"term":"GO:0000452"}]},"cv_name":"biological_process","definition":"The posttranscriptional addition of methyl groups to the 2'-oxygen atom of nucleotide residues in an rRNA molecule during ribosome biogenesis using a snoRNA guide that targets the position of methylation.","definition_xrefs":["ISBN:1555811337","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 2'-O-methylation","termid":"GO:0000451"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00744":null,"SJAG_00943":null,"SJAG_02350":null,"SJAG_02377":null,"SJAG_03410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0042254","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"snoRNA guided rRNA 2'-O-methylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"snoRNA guided rRNA 2'-O-ribose methylation","type":"related"}],"termid":"GO:0000452","terms_by_termid":{"GO:0000452":null}}


id: PBO:0011122
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromsome Segregation in Meiosis","termid":"PBO:0011122"}


id: PBO:0114949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CHY type zinc finger protein involved in rescue of stalled ribosomes","termid":"PBO:0114949"}


id: PBO:0049849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heme binding protein 2","termid":"PBO:0049849"}


id: PBO:0071053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 55","termid":"PBO:0071053"}


id: MONDO:0022782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft lower lip cleft lateral canthi chorioretinal","termid":"MONDO:0022782","xrefs":{"Monarch":{"xref_id":"0022782"}}}


id: GO:0070447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of oligodendrocyte progenitor proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gliogenesis","termid":"GO:0014015"},{"relation_name":"is_a","term_name":"regulation of oligodendrocyte progenitor proliferation","termid":"GO:0070445"},{"relation_name":"is_a","term_name":"positive regulation of neural precursor cell proliferation","termid":"GO:2000179"},{"relation_name":"positively_regulates","term_name":"oligodendrocyte progenitor proliferation","termid":"GO:0070444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oligodendrocyte progenitor proliferation","synonyms":[{"name":"positive regulation of oligodendrocyte precursor proliferation","type":"exact"}],"termid":"GO:0070447"}


id: GO:0052644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chlorophyllide a, a chlorophyll lacking the terpenoid side chain, which is the functional parent of chlorophyll a.","definition_xrefs":["PMID:7724548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"chlorophyllide metabolic process","termid":"GO:0052643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0033013","GO:0044281"],"is_obsolete":false,"name":"chlorophyllide a metabolic process","synonyms":[{"name":"chlorophyllide a metabolism","type":"exact"}],"termid":"GO:0052644"}


id: MONDO:0032833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower urinary tract obstruction, congenital","secondary_identifiers":["OMIM:618612","MEDGEN:1684849","UMLS:C5231427"],"synonyms":[{"name":"LOWER URINARY TRACT OBSTRUCTION, CONGENITAL","type":"related"},{"name":"LUTO","type":"related"}],"termid":"MONDO:0032833","xrefs":{"Monarch":{"xref_id":"0032833"}}}


id: GO:0047852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: transferrin[Fe2+]2 + NAD+ = transferrin[Fe3+]2 + NADH.","definition_xrefs":["RHEA:13841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diferric-transferrin reductase (NAD+) activity","secondary_identifiers":["EC:1.16.1.2","MetaCyc:DIFFERIC-TRANSFERRIN-REDUCTASE-RXN"],"synonyms":[{"name":"NADH diferric transferrin reductase activity","type":"related"},{"name":"diferric transferrin reductase activity","type":"related"},{"name":"transferrin reductase activity","type":"related"},{"name":"transferrin[Fe(II)]2:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047852"}


id: PBO:0050331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 33","termid":"PBO:0050331"}


id: SO:0000860
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Attribute describing sequence regions occurring in same order on chromosome of different species.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved","termid":"SO:0000856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntenic","secondary_identifiers":["http://en.wikipedia.org/wiki/Syntenic"],"termid":"SO:0000860"}


id: PBO:0038834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 7","termid":"PBO:0038834"}


id: GO:0090387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a phagosome, a vesicle formed by phagocytosis, fuses with a lysosome as a part of apoptotic cell clearance.","definition_xrefs":["GOC:tb","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagolysosome assembly","termid":"GO:0001845"},{"relation_name":"part_of","term_name":"phagosome maturation involved in apoptotic cell clearance","termid":"GO:0090386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"phagolysosome assembly involved in apoptotic cell clearance","termid":"GO:0090387"}


id: GO:0010781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which double-strand breaks are generated at defined hotspots throughout the genome during meiosis I resulting in meiotic gene conversion. Meiotic gene conversion is the cell cycle process in which genetic information is transferred from one helix to another.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA double-strand break formation","termid":"GO:0042138"},{"relation_name":"part_of","term_name":"meiotic gene conversion","termid":"GO:0006311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"meiotic DNA double-strand break formation involved in meiotic gene conversion","termid":"GO:0010781"}


id: PBO:0071406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 12","termid":"PBO:0071406"}


id: PBO:0074501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptosome associated protein 91","termid":"PBO:0074501"}


id: FYPO:0007574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic spindle pole body for a shorter time than normal.","definition_xrefs":["PMID:25501814","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased duration of protein localization to mitotic spindle pole body","synonyms":[{"name":"decreased duration of protein localisation to mitotic spindle pole body","type":"exact"},{"name":"decreased duration of protein localization to mitotic SPB","type":"exact"},{"name":"decreased duration of protein localization to mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased duration of protein localization to spindle pole body during vegetative growth","type":"exact"},{"name":"reduced duration protein localization to mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0007574"}


id: GO:0048392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an intermediate mesoderm cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"intermediate mesoderm formation","termid":"GO:0048391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell differentiation","synonyms":[{"name":"intermediate mesoderm cell differentiation","type":"exact"}],"termid":"GO:0048392"}


id: PBO:0054949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2363","termid":"PBO:0054949"}


id: SO:0000485
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one DJ-gene, and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DJ_J_cluster","synonyms":[{"name":"(DJ)-J-CLUSTER","type":"exact"},{"name":"DJ J cluster","type":"exact"}],"termid":"SO:0000485"}


id: MONDO:0022968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dextrocardia with situs inversus is a condition that is characterized by abnormal positioning of the heart and other internal organs. In people affected by dextrocardia, the tip of the heart points towards the right side of the chest instead of the left side. Situs inversus refers to the mirror-image reversal of the organs in the chest and abdominal cavity. Some affected people have no obvious signs or symptoms. However, a small percentage of people also have congenital heart defects, usually transposition of the great vessels. Dextrocardia with situs inversus can also be associated with primary ciliary dyskinesia (also known as Kartagener syndrome). Treatment typically depends on the heart or physical problems the person may have in addition to dextrocardia with situs inversus.","definition_xrefs":["GARD:0006268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dextrocardia with situs inversus","secondary_identifiers":["UMLS:C1395317","MEDGEN:237234"],"synonyms":[{"name":"situs inversus totalis","type":"related"}],"termid":"MONDO:0022968","xrefs":{"Monarch":{"xref_id":"0022968"}}}


id: GO:0051844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peptides or proteins produced by an organism to a location inside the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocation of molecules into symbiont","termid":"GO:0051862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"translocation of peptides or proteins into symbiont","synonyms":[{"name":"transport of peptides or proteins into symbiont","type":"exact"}],"termid":"GO:0051844"}


id: MONDO:0016752
data:
  {"annotated_genes":["SJAG_01111","SJAG_04213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87642,87641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tumor of cranial and spinal nerves","termid":"MONDO:0016749"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null},"genotype_count":0,"is_obsolete":false,"name":"benign peripheral nerve sheath tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1843306","Orphanet:252131","UMLS:C5577926"],"synonyms":[{"name":"BPNST","type":"exact"}],"termid":"MONDO:0016752","terms_by_termid":{"MONDO:0024517":null},"xrefs":{"Monarch":{"xref_id":"0016752"}}}


id: MONDO:0000816
data:
  {"annotated_genes":["SJAG_04980"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014352"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"overnutrition","termid":"MONDO:0003916"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04980":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"abdominal obesity-metabolic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C535554","NCIT:C84442","DOID:0060611","MEDGEN:419670","ICD10CM:E88.81","ICD9:277.7","OMIMPS:605552","Orphanet:411969","UMLS:C2930930"],"synonyms":[{"name":"metabolic syndrome","type":"exact"},{"name":"metabolic syndrome X","type":"narrow"}],"termid":"MONDO:0000816","terms_by_termid":{"MONDO:0014352":null},"xrefs":{"Monarch":{"xref_id":"0000816"}}}


id: MOD:01608
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to N2-(L-isoglutamyl)-L-lysine. This is not an isopeptide cross-link.","definition_xrefs":["PubMed:19620981","RESID:AA0505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2-(L-isoglutamyl)-L-lysine","synonyms":[{"name":"(2S)-6-amino-2-([(4S)-4-amino-4-carboxybutanoyl]amino)hexanoic acid","type":"exact"},{"name":"5-glutamyl N2-lysine","type":"exact"},{"name":"MOD_RES 5-glutamyl N2-lysine","type":"exact"},{"name":"N2-(L-isoglutamyl)-L-lysine","type":"exact"},{"name":"N2-(gamma-glutamyl)lysine","type":"exact"},{"name":"alpha-(gamma-glutamyl)lysine","type":"exact"},{"name":"gamma-glutamyl N2-lysine","type":"exact"}],"termid":"MOD:01608"}


id: PBO:0060501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 4","termid":"PBO:0060501"}


id: MONDO:0017628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myospherulosis","secondary_identifiers":["GARD:21255","Orphanet:306553","ICD9:136.8","UMLS:C0027123","MEDGEN:507970","SCTID:81139004"],"synonyms":[{"name":"spherulocytosis","type":"exact"},{"name":"subcutaneous spherulocystic disease","type":"exact"}],"termid":"MONDO:0017628","xrefs":{"Monarch":{"xref_id":"0017628"}}}


id: GO:0071617
data:
  {"annotated_genes":["SJAG_04041","SJAG_04792","SJAG_04323","SJAG_01957"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77187,72038,90359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003841"},{"annotations":[71443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042171"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of acyl groups from an acyl-CoA to a lysophospholipid.","definition_xrefs":["GOC:cjk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01957":null,"SJAG_04041":null,"SJAG_04323":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"lysophospholipid acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0071617","terms_by_termid":{"GO:0003841":null,"GO:0042171":null}}


id: MONDO:0024308
data:
  {"annotated_genes":["SJAG_03785","SJAG_01344","SJAG_05213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85505,85506,85507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009925"},{"annotations":[86217,86218,86219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008333"}]},"cv_name":"mondo","definition":"An inherited disorder that causes calcium and other minerals to accumulate in the elastic fibers of the skin, eyes, and blood vessels, and less frequently in other areas such as the digestive tract.","definition_xrefs":["GARD:0009643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03785":null,"SJAG_05213":null},"genotype_count":0,"is_obsolete":false,"name":"pseudoxanthoma elasticum (inherited or acquired)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:757.39","NANDO:1200643","SCTID:252246005","UMLS:C0033847","MEDGEN:18733"],"synonyms":[{"name":"PXE","type":"exact"},{"name":"pseudoxanthoma elasticum","type":"exact"}],"termid":"MONDO:0024308","terms_by_termid":{"MONDO:0008333":null,"MONDO:0009925":null},"xrefs":{"Monarch":{"xref_id":"0024308"}}}


id: PR:Q9P7Q7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mak1 gene.","definition_xrefs":["UniProtKB:Q9P7Q7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxide stress-activated histidine kinase mak1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.08","synonyms":[{"name":"Spom972h-mak1","type":"exact"},{"name":"his-Asp phosphorelay kinase phk3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mcs4-associated kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7Q7"}


id: SO:0100013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Hydrophobic regions are regions with a low affinity for water.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"hydrophobic_region_of_peptide","synonyms":[{"name":"hydropathic","type":"related"},{"name":"hydrophobic region of peptide","type":"related"},{"name":"hydrophobic_region","type":"exact"},{"name":"hydrophobicity","type":"related"}],"termid":"SO:0100013"}


id: GO:0090213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of radial pattern formation, the regionalization process that results in defined areas around a point in which specific types of cell differentiation will occur.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"radial pattern formation","termid":"GO:0009956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of radial pattern formation","synonyms":[{"name":"regulation of radial pattern specification","type":"narrow"}],"termid":"GO:0090213"}


id: FYPO:0005179
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ultraviolet light (UV) exposure during mitotic G1 phase is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to UV. The most common abnormality is for the cell cycle to progress as in the absence of UV.","definition_xrefs":["PMID:15498101","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to UV","termid":"FYPO:0004254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to UV during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle delay following UV exposure during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle regulation during cellular response to UV during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ultraviolet light during mitotic G1 phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to UV during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005179"}


id: GO:0071757
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A circulating form of IgM consisting of a hexamer of IgM core units with a single J chain polypeptide.","definition_xrefs":["ISBN:0781765196","PMID:20176268","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgM immunoglobulin complex, circulating","termid":"GO:0071754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"hexameric IgM immunoglobulin complex","synonyms":[{"name":"hexameric IgM antibody","type":"exact"}],"termid":"GO:0071757"}


id: FYPO:0005052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of cleavage of double-stranded RNA to form small interfering RNA molecules (siRNAs), as part of chromatin silencing by small RNA, is decreased.","definition_xrefs":["PomBase:mah","GO:0070919"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased production of siRNA involved in chromatin silencing by small RNA (obsolete FYPO:0005052)","synonyms":[{"name":"decreased chromatin silencing by small RNA, production of guide RNAs","type":"exact"},{"name":"decreased chromatin silencing by small RNA, production of siRNA","type":"exact"},{"name":"decreased production of guide RNAs involved in chromatin silencing by small RNA","type":"exact"},{"name":"decreased production of siRNA involved in chromatin silencing by small RNA during mitotic cell cycle","type":"related"},{"name":"decreased production of siRNA involved in chromatin silencing by small RNA during vegetative growth","type":"exact"},{"name":"reduced production of siRNA involved in chromatin silencing by small RNA","type":"exact"}],"termid":"FYPO:0005052"}


id: FYPO:0002317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of squalene measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular squalene level","synonyms":[{"name":"increased cellular squalene level during mitotic cell cycle","type":"related"},{"name":"increased cellular squalene level during vegetative growth","type":"exact"},{"name":"increased squalene accumulation","type":"related"}],"termid":"FYPO:0002317"}


id: PBO:0042838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 43","termid":"PBO:0042838"}


id: PBO:0078429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (GCC) 6-1","termid":"PBO:0078429"}


id: PBO:0062988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PACRG antisense RNA 3","termid":"PBO:0062988"}


id: GO:0033074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the breakdown of the monoterpenoid pinene; alpha-pinene is (1S,5S)-2,6,6-trimethylbicyclo[3.1.1]hept-2-ene, and beta-pinene is (1S,5S)-6,6-dimethyl-2-methylenebicyclo[3.1.1]heptane.","definition_xrefs":["GOC:mah","PMID:11452597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinene metabolic process","termid":"GO:0033073"},{"relation_name":"is_a","term_name":"monoterpene catabolic process","termid":"GO:0043694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pinene catabolic process","synonyms":[{"name":"pinene breakdown","type":"exact"},{"name":"pinene catabolism","type":"exact"},{"name":"pinene degradation","type":"exact"}],"termid":"GO:0033074"}


id: GO:0106190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons linked to a decarboxylation reaction.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on hydrons linked to a decarboxylation reaction (obsolete GO:0106190)","termid":"GO:0106190"}


id: MONDO:0014717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Early-onset Lafora body disease is an extremely rare, inherited form of progressive myoclonic epilepsy characterized by progressive myoclonus epilepsy and Lafora bodies, with an early onset (at around 5 years) and a prolonged disease course. Other manifestations include progressive dysarthria, ataxia, cognitive decline, psychosis, dementia, spasticity, dysarthria, myoclonus, and ataxia. The disease course typically extends for several decades.","definition_xrefs":["Orphanet:324290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"early-onset Lafora body disease","secondary_identifiers":["MEDGEN:907932","GARD:17482","DOID:0111445","UMLS:C4225258","OMIM:616640","SCTID:733082001"],"synonyms":[{"name":"EPM10","type":"exact"},{"name":"epilepsy, progressive myoclonic, 10","type":"exact"},{"name":"epilepsy, progressive myoclonic, type 10","type":"exact"}],"termid":"MONDO:0014717","xrefs":{"Monarch":{"xref_id":"0014717"}}}


