# terms

id: GO:0150164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process mediated by a microRNA (miRNA) that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:20737563","GOC:aruk","PMID:27145859"],"gene_count":0,"genotype_count":0,"name":"obsolete miRNA-mediated regulation of transcription by RNA polymerase II (obsolete GO:0150164)","termid":"GO:0150164"}


id: MONDO:0100039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A monogenic disease that has material basis in mutation in the CDKL5 gene.","definition_xrefs":["PMID:27528505","PMID:21154482","PMID:22872100","PMID:27080038"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"pervasive developmental disorder","termid":"MONDO:0000594"},{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"excluded_subClassOf","term_name":"obsolete motor stereotypies (obsolete MONDO:0017656)","termid":"MONDO:0017656"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKL5 disorder","secondary_identifiers":["NORD:904"],"synonyms":[{"name":"CDKL5","type":"related"},{"name":"CDKL5 Deficiency Disorder","type":"exact"},{"name":"CDKL5 disorder","type":"exact"},{"name":"CDKL5 inherited genetic disease","type":"exact"},{"name":"CDKL5-related disorder","type":"related"},{"name":"inherited genetic disease caused by mutation in CDKL5","type":"exact"}],"termid":"MONDO:0100039","xrefs":{"Monarch":{"xref_id":"0100039"}}}


id: FYPO:0000360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA localization is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal RNA localization","termid":"FYPO:0003057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal RNA localization during vegetative growth","synonyms":[{"name":"RNA localization: abnormal","type":"related"},{"name":"abnormal RNA localisation during vegetative growth","type":"exact"},{"name":"abnormal RNA localization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000360"}


id: PATO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which is equal to the energy transferred by a force to a moving object.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Work"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"work","synonyms":[{"name":"W","type":"exact"}],"termid":"PATO:0001026"}


id: FYPO:0004258
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein tyrosine phosphorylation during cellular response to hydroxyurea (obsolete FYPO:0004258)","synonyms":[{"name":"decreased peptidyl-tyrosine phosphorylation during cellular response to hydroxyurea","type":"exact"},{"name":"decreased protein tyrosine phosphorylation during cellular response to HU","type":"exact"},{"name":"decreased protein tyrosine phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"decreased protein tyrosine phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"decreased tyrosine phosphorylation during cellular response to hydroxyurea","type":"exact"},{"name":"reduced protein tyrosine phosphorylation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0004258"}


id: GO:0022850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when serotonin has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:12867984","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"},{"relation_name":"is_a","term_name":"serotonin receptor activity","termid":"GO:0099589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"serotonin-gated monoatomic cation channel activity","secondary_identifiers":["GO:0005232","Reactome:R-HSA-9648983","Reactome:R-HSA-975311"],"synonyms":[{"name":"5-hydroxytryptamine-gated receptor-channel","type":"narrow"},{"name":"serotonin-activated cation-selective channel activity","type":"exact"},{"name":"serotonin-gated cation channel activity","type":"narrow"},{"name":"serotonin-gated cation-selective channel activity","type":"broad"},{"name":"serotonin-gated monoatomic cation-selective channel activity","type":"exact"}],"termid":"GO:0022850"}


id: GO:0015972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving guanine pentaphosphate (5'-pppGpp-3'), a derivative of guanine riboside with five phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate metabolic process","termid":"GO:0034035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"guanosine pentaphosphate metabolic process","synonyms":[{"name":"guanosine pentaphosphate (5'-pppGpp-3') metabolic process","type":"exact"},{"name":"guanosine pentaphosphate (5'-pppGpp-3') metabolism","type":"exact"},{"name":"guanosine pentaphosphate metabolism","type":"exact"}],"termid":"GO:0015972"}


id: PBO:0088550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial MIM complex subunit Mim1","termid":"PBO:0088550"}


id: PBO:0083890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; also part of the nuclear pore complex (NPC) cytoplasmic filaments; contributes directly to nucleocytoplasmic transport and maintenance of the NPC permeability barrier and is involved in gene tethering at the nuclear periphery; interacts with Gle1p; human homolog NUP42 can complement yeast mutant","termid":"PBO:0083890"}


id: PBO:0086560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR007W is not an essential gene","termid":"PBO:0086560"}


id: GO:0006954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages.","definition_xrefs":["GO_REF:0000022","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflammatory response","secondary_identifiers":["Wikipedia:Inflammation"],"synonyms":[{"name":"inflammation","type":"broad"}],"termid":"GO:0006954"}


id: MONDO:0007839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aase-Smith syndrome type I is a very rare genetic disorder characterized by the following congenital malformations: hydrocephalus (due to Dandy-Walker anomaly), cleft palate, and severe joint contractures.","definition_xrefs":["Orphanet:916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"Aase-Smith syndrome","secondary_identifiers":["MESH:C535332","OMIM:147800","SCTID:718576001","GARD:5642","UMLS:C0220686","MedDRA:10063429","MEDGEN:66316"],"synonyms":[{"name":"Aase-Smith I syndrome","type":"exact"},{"name":"Aase-Smith syndrome","type":"exact"},{"name":"Aase-Smith syndrome 1","type":"related"},{"name":"Aase-Smith syndrome I","type":"related"},{"name":"Aase-Smith syndrome type 1","type":"exact"},{"name":"Joint contractures with Other abnormalities","type":"related"},{"name":"hydrocephalus-cleft palate-joint contractures syndrome","type":"exact"}],"termid":"MONDO:0007839","xrefs":{"Monarch":{"xref_id":"0007839"}}}


id: SO:0001603
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant with in the CDS that causes a change in the resulting polypeptide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_structure_variant","termid":"SO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_sequence_variant","synonyms":[{"name":"polypeptide sequence variant","type":"exact"}],"termid":"SO:0001603"}


id: MONDO:1010319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coloboma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coloboma, non-human animal","secondary_identifiers":["OMIA:000219"],"termid":"MONDO:1010319","xrefs":{"Monarch":{"xref_id":"1010319"}}}


id: MONDO:0002539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oligodendroglioma (obsolete MONDO:0002539)","termid":"MONDO:0002539","xrefs":{"Monarch":{"xref_id":"0002539"}}}


id: PATO:0000904
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000904 wild abortive value (obsolete PATO:0000904)","termid":"PATO:0000904"}


id: MOD:01448
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-3,3-dihydroxyoalanine.","definition_xrefs":["RESID:AA0492","PubMed:17558559","PubMed:11435113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3,3-dihydroxyoalanine","synonyms":[{"name":"(S)-2-amino-3,3-dihydroxypropanoic acid","type":"exact"},{"name":"2-(dihydroxymethyl)glycine","type":"exact"},{"name":"3,3-dihydroxy-L-alanine","type":"exact"},{"name":"3,3-dihydroxyalanine","type":"exact"},{"name":"3-hydroxy-L-serine","type":"exact"},{"name":"3-oxoalanine hydrate","type":"exact"},{"name":"C(alpha)-formylglycine hydrate","type":"related"}],"termid":"MOD:01448"}


id: PBO:0087056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L27A; homologous to mammalian ribosomal protein L27, no bacterial homolog; RPL27A has a paralog, RPL27B, that arose from the whole genome duplication","termid":"PBO:0087056"}


id: PBO:0053747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 974","termid":"PBO:0053747"}


id: PR:Q10254
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00454","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.06c","secondary_identifiers":["UniProtKB:Q10254"],"synonyms":[{"name":"Spom972h-ALG10B","type":"exact"},{"name":"alpha-1,2-glucosyltransferase alg10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-2-glucosyltransferase alg10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"asparagine-linked glycosylation protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dolichyl-phosphoglucose-dependent glucosyltransferase alg10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10254"}


id: PBO:0068313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF14 pseudogene 1","termid":"PBO:0068313"}


id: PBO:0028150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_macromolecular_complex","termid":"PBO:0028150"}


id: PBO:0027963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_glutathione_level_during_nitrogen_starvation","termid":"PBO:0027963"}


id: GO:0120064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within gastric smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the most distal part of the stomach.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal stomach smooth muscle contraction","termid":"GO:0014828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomach pylorus smooth muscle contraction","termid":"GO:0120064"}


id: GO:0033365
data:
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id: PR:O14466
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id: PBO:0067288
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id: MONDO:0003098
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id: GO:0001090
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id: PBO:0034466
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id: PBO:0045431
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id: GO:0090291
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id: PBO:0028832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_homologous_chromosome_pairing_at_cis-acting_homologous_chromosome_pairing_region","termid":"PBO:0028832"}


id: PBO:0039413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 16","termid":"PBO:0039413"}


id: PBO:0045100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMAC1 pseudogene 1","termid":"PBO:0045100"}


id: PBO:0067643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 817, pseudogene","termid":"PBO:0067643"}


id: GO:0097135
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin E2 and cyclin-dependent kinase 2 (CDK2). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:15935619","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin E2-CDK2 complex","termid":"GO:0097135"}


id: GO:0010779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of DNA proceeding from the broken 3' single-strand DNA end that uses the homologous intact duplex as the template resulting in meiotic gene conversion. Meiotic gene conversion is the cell cycle process in which genetic information is transferred from one helix to another.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA repair synthesis","termid":"GO:0000711"},{"relation_name":"part_of","term_name":"meiotic gene conversion","termid":"GO:0006311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0007049","GO:0006281","GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"meiotic DNA repair synthesis involved in meiotic gene conversion","termid":"GO:0010779"}


id: PBO:0071611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 29","termid":"PBO:0071611"}


id: GO:0018308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient modification of lysine by pyruvate to form N6-pyruvic acid 2-iminyl-L-lysine, found in the active site of dihydrodipicolinate synthase.","definition_xrefs":["RESID:AA0287","PMID:1463470"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via N6-pyruvic acid 2-iminyl-L-lysine (obsolete GO:0018308)","synonyms":[{"name":"enzyme active site formation via N6-pyruvic acid 2-iminyl-L-lysine","type":"exact"}],"termid":"GO:0018308"}


id: PBO:0067212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 278, pseudogene","termid":"PBO:0067212"}


id: PBO:0036391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human THOC5 ortholog Tho5 (predicted)","termid":"PBO:0036391"}


id: MOD:00448
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an N-acetylaminoglucose group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated","termid":"MOD:00733"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-acetylaminoglucosylated residue","synonyms":[{"name":"GlcNAcRes","type":"exact"},{"name":"HexNAc","type":"related"}],"termid":"MOD:00448"}


id: MONDO:0023076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eosinophilic pustular folliculitis (EPF) is a skin disorder characterized by recurring itchy, red or skin-colored bumps and pustules (bumps containing pus). The condition is named after the fact that skin biopsies of this disorder find eosinophils (a type of immune cell) around hair follicles. The papules mostly appear on the face, scalp, neck and trunk and may persist for weeks or months. EPF affects males more than females.There are several variants of EPF includingclassic eosinophilic pustular folliculitis (mainly occurring in adults in Japan); HIV-associated EPF, also referred to as immunosuppression-associated EPF; and infantile EPF (with onset from birth or within the first year of life). Whether these are distinct disorders rather than variants of one disorder is controversial, partly because the underlying cause of EFP is not known.Several treatments have been described with variable results, including various oral or topical medications and phototherapy. In patients with HIV-associated disease, antiretroviral therapy tends to greatly diminish symptoms or even eliminate the condition.","definition_xrefs":["GARD:0008534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folliculitis","termid":"MONDO:0006552"},{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"eosinophilic pustular folliculitis","secondary_identifiers":["UMLS:C0406305","MEDGEN:140800","ICD9:704.8","SCTID:95333004","GARD:8534","icd11.foundation:1653155576","MESH:C535953"],"synonyms":[{"name":"EPF","type":"related"},{"name":"Ofuji disease","type":"related"},{"name":"Ofuji's disease","type":"related"},{"name":"eosinophilic folliculitis","type":"related"},{"name":"eosinophilic folliculitis, pustular","type":"related"}],"termid":"MONDO:0023076","xrefs":{"Monarch":{"xref_id":"0023076"}}}


id: MONDO:0007020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute neurological disorder characterized by the triad of ophthalmoplegia, ataxia, and disturbances of mental activity or consciousness. Eye movement abnormalities include nystagmus, external rectus palsies, and reduced conjugate gaze. thiamine deficiency and chronic alcoholism are associated conditions. Pathologic features include periventricular petechial hemorrhages and neuropil breakdown in the diencephalon and brainstem. Chronic thiamine deficiency may lead to korsakoff syndrome. (Adams et al., Principles of Neurology, 6th ed, pp1139-42; Davis & Robertson, Textbook of Neuropathology, 2nd ed, pp452-3)","definition_xrefs":["MESH:D014899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"alcohol-related disorders","termid":"MONDO:0021698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wernicke encephalopathy","secondary_identifiers":["icd11.foundation:1360335041","Orphanet:97354","MEDGEN:53073","SCTID:21007002","DOID:2384","ICD9:265.1","ICD10CM:E51.2","UMLS:C0043121"],"synonyms":[{"name":"Wernicke's disease","type":"exact"},{"name":"Wernicke's encephalopathy","type":"exact"},{"name":"dementia due to thiamine deficiency","type":"exact"}],"termid":"MONDO:0007020","xrefs":{"Monarch":{"xref_id":"0007020"}}}


id: PBO:0082939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic DEAD-box helicase and mRNA decapping activator; interacts with decapping and deadenylase complexes to coordinate mRNA decapping and decay; regulates general translational repression; translational activator of select mRNAs during filamentous growth, mating and autophagy; cooperates with Ngr1p to promote specific mRNA decay; ATP- and RNA-bound form promotes processing body assembly, while ATPase stimulation by Not1p promotes disassembly; forms cytoplasmic foci on replication stress","termid":"PBO:0082939"}


id: GO:0102804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: oripavine + 2-oxoglutarate + O2 = morphinone + formaldehyde + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete oripavine 6-O-demethylase activity (obsolete GO:0102804)","termid":"GO:0102804"}


id: PBO:0056024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSP1 pseudogene 2","termid":"PBO:0056024"}


id: MONDO:0035734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema","termid":"MONDO:0019623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary angioedema with normal C1inh not related to F12 or PLG variant","secondary_identifiers":["MEDGEN:1843147","GARD:22406","Orphanet:599418","UMLS:C5681601"],"termid":"MONDO:0035734","xrefs":{"Monarch":{"xref_id":"0035734"}}}


id: GO:0015895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of alkanes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Alkanes are saturated aliphatic hydrocarbon compounds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"alkane transport","termid":"GO:0015895"}


id: GO:0071691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the actin-based thin filaments of myofibrils in cardiac muscle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"},{"relation_name":"part_of","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"cardiac muscle thin filament assembly","termid":"GO:0071691"}


id: GO:0015203
data:
  {"annotated_genes":["SJAG_02060","SJAG_02344","SJAG_02125","SJAG_02059"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015489"},{"annotations":[117742,111312,71013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015606"},{"annotations":[117743,80060,111313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000297"}]},"cv_name":"molecular_function","definition":"Enables the transfer of polyamines, organic compounds containing two or more amino groups, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02344":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"polyamine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"amine/amide/polyamine channel activity","type":"related"}],"termid":"GO:0015203","terms_by_termid":{"GO:0000297":null,"GO:0015489":null,"GO:0015606":null}}


id: PBO:0059303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L49 pseudogene 2","termid":"PBO:0059303"}


id: PBO:0031870
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in Fungi","termid":"PBO:0031870"}


id: PBO:0089321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A regulatory subunit, Zds1","termid":"PBO:0089321"}


id: MONDO:0020409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"univentricular heart","termid":"MONDO:0015451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"univentricular heart with single atrio-ventricular valve","secondary_identifiers":["Orphanet:99069"],"termid":"MONDO:0020409","xrefs":{"Monarch":{"xref_id":"0020409"}}}


id: MONDO:0022200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete treatment for disease (obsolete MONDO:0022200)","termid":"MONDO:0022200","xrefs":{"Monarch":{"xref_id":"0022200"}}}


id: PBO:0059308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L50 pseudogene 4","termid":"PBO:0059308"}


id: GO:0044184
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A prelysosomal endocytic organelle differentiated from host early endosomes by lower lumenal pH and different protein composition. Host late endosomes are more spherical than early endosomes and are mostly juxtanuclear, being concentrated near the microtubule organizing center.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endosome","termid":"GO:0044174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell late endosome","termid":"GO:0044184"}


id: PBO:0117013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNJ8 antisense RNA 1","termid":"PBO:0117013"}


id: PBO:0029480
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_sterol_ester_level","termid":"PBO:0029480"}


id: GO:1900508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of iron-sulfur-molybdenum cofactor assembly.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron-sulfur-molybdenum cofactor assembly","termid":"GO:1900506"},{"relation_name":"is_a","term_name":"positive regulation of iron-sulfur cluster assembly","termid":"GO:1903331"},{"relation_name":"positively_regulates","term_name":"iron-sulfur-molybdenum cofactor assembly","termid":"GO:0044593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"positively_regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016226","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of iron-sulfur-molybdenum cofactor assembly","synonyms":[{"name":"activation of FeMoco assembly","type":"exact"},{"name":"activation of FeMoco biosynthetic process","type":"exact"},{"name":"activation of iron molybdenum cofactor assembly","type":"exact"},{"name":"activation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"activation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"activation of iron-sulfur-molybdenum cofactor assembly","type":"narrow"},{"name":"positive regulation of FeMoco assembly","type":"exact"},{"name":"positive regulation of FeMoco biosynthetic process","type":"exact"},{"name":"positive regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"positive regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"positive regulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"up regulation of FeMoco assembly","type":"exact"},{"name":"up regulation of FeMoco biosynthetic process","type":"exact"},{"name":"up regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"up regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"up regulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"up regulation of iron-sulfur-molybdenum cofactor assembly","type":"exact"},{"name":"up-regulation of FeMoco assembly","type":"exact"},{"name":"up-regulation of FeMoco biosynthetic process","type":"exact"},{"name":"up-regulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"up-regulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"up-regulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"up-regulation of iron-sulfur-molybdenum cofactor assembly","type":"exact"},{"name":"upregulation of FeMoco assembly","type":"exact"},{"name":"upregulation of FeMoco biosynthetic process","type":"exact"},{"name":"upregulation of iron molybdenum cofactor assembly","type":"exact"},{"name":"upregulation of iron molybdenum cofactor biosynthesis","type":"exact"},{"name":"upregulation of iron molybdenum cofactor biosynthetic process","type":"exact"},{"name":"upregulation of iron-sulfur-molybdenum cofactor assembly","type":"exact"}],"termid":"GO:1900508"}


id: PBO:0068734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 5, pseudogene","termid":"PBO:0068734"}


id: PBO:0083734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential chromatin-associated protein; involved in initiation of DNA replication; required for association of MCM2-7 complex with replication origins; required to stabilize catalytic subunit of DNA polymerase-alpha; coordinates function of replication fork helicase; self-associates through its N-terminal domain","termid":"PBO:0083734"}


id: GO:0018799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + H+ = CO2 + phenol.","definition_xrefs":["EC:4.1.1.61","RHEA:10876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"4-hydroxybenzoate decarboxylase activity","secondary_identifiers":["UM-BBD_reactionID:r0159","KEGG_REACTION:R01238","MetaCyc:4-HYDROXYBENZOATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"4-hydroxybenzoate carboxy-lyase (phenol-forming)","type":"related"},{"name":"4-hydroxybenzoate carboxy-lyase activity","type":"related"},{"name":"p-hydroxybenzoate decarboxylase activity","type":"related"}],"termid":"GO:0018799"}


id: PBO:0063827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired like homeobox 2B","termid":"PBO:0063827"}


id: PR:O14463
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01101","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.07c","secondary_identifiers":["UniProtKB:O14463"],"synonyms":[{"name":"Spom972h-TXN","type":"exact"},{"name":"TR-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Trx-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14463"}


id: MOD:00598
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(2-hydroxyethyl)cysteine","definition_xrefs":["PubMed:15351294","Unimod:278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(2-hydroxyethyl)cysteine","synonyms":[{"name":"Ethanolation of Cys","type":"related"},{"name":"Ethanolyl","type":"related"}],"termid":"MOD:00598"}


id: MONDO:0013221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Miyoshi myopathy","termid":"MONDO:0009685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Miyoshi muscular dystrophy 2","secondary_identifiers":["MEDGEN:413751","UMLS:C2750077","OMIM:613318","MESH:C567646","GARD:15648","DOID:0070200"],"synonyms":[{"name":"MIYOSHI muscular dystrophy 2","type":"related"},{"name":"MMD2","type":"exact"},{"name":"Miyoshi muscular dystrophy 2","type":"exact"},{"name":"Miyoshi myopathy 2","type":"related"}],"termid":"MONDO:0013221","xrefs":{"Monarch":{"xref_id":"0013221"}}}


id: GO:0008623
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ISWI complex that contains an ATPase subunit of the ISWI family (SNF2H in mammals, Isw2 in S. cerevisiae), an ACF1 homolog, and additional small histone fold subunits (generally two of these, but Xenopus has only one and some additional non-conserved subunits). CHRAC plays roles in the regulation of RNA polymerase II transcription and in DNA replication and repair.","definition_xrefs":["PMID:21810179","PMID:16568949","GOC:krc","PMID:9252192","GOC:bf","PMID:15284901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"CHRAC","secondary_identifiers":["GO:0016588"],"synonyms":[{"name":"ISW2 complex","type":"narrow"},{"name":"chromatin accessibility complex","type":"exact"}],"termid":"GO:0008623"}


id: PBO:0045843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 33","termid":"PBO:0045843"}


id: PBO:0083217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps verified gene ARO9/YHR137W; identified by gene-trapping, expression analysis, and genome-wide homology searching","termid":"PBO:0083217"}


id: PBO:0074909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 80","termid":"PBO:0074909"}


id: PBO:0015238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contractie ring myosin V regulator Rng8","termid":"PBO:0015238"}


id: GO:0001522
data:
  {"annotated_genes":["SJAG_03572","SJAG_01172","SJAG_04065","SJAG_03125","SJAG_02978","SJAG_03213","SJAG_00319","SJAG_00083","SJAG_00566","SJAG_00088","SJAG_04754","SJAG_01234","SJAG_03755"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65433,69246],"is_not":false,"summary":null,"term":"GO:0001522"},{"annotations":[75986,106589,57338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000455"},{"annotations":[80445,71122,78804,76042,73322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990481"},{"annotations":[80449,90336,78116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031118"},{"annotations":[74860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000454"},{"annotations":[106653,59294,78117,80450,106590,114680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031120"},{"annotations":[106591,73324,102833,76044,78806,91535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031119"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine within an RNA molecule.","definition_xrefs":["GOC:mah","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00088":null,"SJAG_00319":null,"SJAG_00566":null,"SJAG_01172":null,"SJAG_01234":null,"SJAG_02978":null,"SJAG_03125":null,"SJAG_03213":null,"SJAG_03572":null,"SJAG_03755":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Wikipedia:Pseudouridylation","Wikipedia:Pseudouridine"],"synonyms":[{"name":"pseudouridylation","type":"exact"}],"termid":"GO:0001522","terms_by_termid":{"GO:0000454":null,"GO:0000455":null,"GO:0001522":null,"GO:0031118":null,"GO:0031119":null,"GO:0031120":null,"GO:1990481":null}}


id: FYPO:0002510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification during vegetative growth","termid":"FYPO:0000547"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during vegetative growth","termid":"FYPO:0002506"},{"relation_name":"is_a","term_name":"increased protein palmitoylation","termid":"FYPO:0002509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein palmitoylation during vegetative growth","synonyms":[{"name":"increased protein palmitoylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002510"}


id: MONDO:0000986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the pleura. It is usually caused by infections. Chest pain while breathing or coughing is the presenting symptom.","definition_xrefs":["NCIT:C26860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pleural disorder","termid":"MONDO:0002037"},{"relation_name":"is_a","term_name":"serositis","termid":"MONDO:0043786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleurisy","secondary_identifiers":["EFO:1001825","DOID:10247","ICD10CM:R09.1","MEDGEN:10807","UMLS:C0032231","ICD9:511.8","MESH:D010998","SCTID:196075003","icd11.foundation:317852053"],"synonyms":[{"name":"inflammation of pleura","type":"exact"},{"name":"pleura inflammation","type":"exact"},{"name":"pleuritis","type":"exact"}],"termid":"MONDO:0000986","xrefs":{"Monarch":{"xref_id":"0000986"}}}


id: GO:0141074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus interferes with, inhibits or disrupt a cGAS/STING signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:27234299","PMID:26405230","PMID:29018427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cGAS-STING signal transduction","synonyms":[{"name":"disruption of host cGAS-STING signal transduction","type":"exact"},{"name":"disruption of host cGAS-STING signaling","type":"exact"},{"name":"suppression of host cGAS-STING","type":"exact"}],"termid":"GO:0141074"}


id: PBO:0052477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 3","termid":"PBO:0052477"}


id: GO:0009195
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine ribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate catabolic process","termid":"GO:0009140"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate catabolic process","termid":"GO:0009191"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate metabolic process","termid":"GO:0009193"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine ribonucleoside diphosphate breakdown","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate catabolism","type":"exact"},{"name":"pyrimidine ribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009195","terms_by_termid":{"GO:0006256":null}}


id: GO:0009729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a brassinosteroid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to brassinosteroid","termid":"GO:0009741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of brassinosteroid stimulus","synonyms":[{"name":"perception of brassinosteroid stimulus","type":"related"}],"termid":"GO:0009729"}


id: PR:Q76PD3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX51 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR24031:SF18","OMA:SCHPO04831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.03","secondary_identifiers":["UniProtKB:Q76PD3"],"synonyms":[{"name":"Spom972h-DDX51","type":"exact"}],"termid":"PR:Q76PD3"}


id: PBO:0079793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member A1 complex locus","termid":"PBO:0079793"}


id: FYPO:0004439
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is curved (i.e. follows a smooth bend rather than a straight line) and longer than normal during anaphase.","definition_xrefs":["PMID:17352737","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long mitotic spindle","termid":"FYPO:0000733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002399","FYPO:0000120","FYPO:0000054"],"is_obsolete":false,"name":"long curved mitotic spindle during anaphase","synonyms":[{"name":"curved mitotic spindle with increased mitotic spindle length during anaphase","type":"exact"},{"name":"elongated curved mitotic spindle during anaphase","type":"exact"},{"name":"long curved bipolar mitotic spindle during anaphase","type":"exact"},{"name":"long curved mitotic spindle during anaphase during vegetative growth","type":"exact"},{"name":"long curved mitotic spindles during anaphase","type":"exact"},{"name":"long curved spindle during anaphase of mitosis","type":"exact"},{"name":"long curved spindle during mitotic anaphase","type":"exact"},{"name":"long mitotic spindle during anaphase, elongating beyond cell end resulting in long curved spindle","type":"exact"}],"termid":"FYPO:0004439"}


id: GO:0102424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (+)-sesaminol 2-O-beta-D-gentiobioside + UDP-alpha-D-glucose = (+)-sesaminol 2-O-beta-D-gentiotrioside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sesaminol-2-O-gentiobioside 1,6-glucosyltransferase activity (obsolete GO:0102424)","termid":"GO:0102424"}


id: GO:0007350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hierarchical steps resulting in the progressive subdivision of the anterior/posterior axis of the embryo.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic pattern specification","termid":"GO:0009880"},{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blastoderm segmentation","termid":"GO:0007350"}


id: PBO:0060175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTUS2 antisense RNA 2","termid":"PBO:0060175"}


id: GO:1990592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ufmylation process in which a polymer of the ubiquitin-like protein UFM1 is formed by linkages between lysine residues at position 69 of the UFM1 monomers, is added to a protein.","definition_xrefs":["PMID:25219498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyufmylation","termid":"GO:1990564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein K69-linked ufmylation","termid":"GO:1990592"}


id: PBO:0079321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 11","termid":"PBO:0079321"}


id: GO:2001263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of C-C chemokine binding.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of C-C chemokine binding (obsolete GO:2001263)","termid":"GO:2001263"}


id: GO:1903082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of C-C chemokine receptor CCR7 signaling pathway.","definition_xrefs":["PMID:11602640","GOC:BHF","GOC:TermGenie","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine-mediated signaling pathway","termid":"GO:0070101"},{"relation_name":"is_a","term_name":"regulation of C-C chemokine receptor CCR7 signaling pathway","termid":"GO:1903080"},{"relation_name":"positively_regulates","term_name":"C-C chemokine receptor CCR7 signaling pathway","termid":"GO:0038118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of C-C chemokine receptor CCR7 signaling pathway","synonyms":[{"name":"activation of C-C chemokine receptor CCR7 signaling pathway","type":"narrow"},{"name":"activation of C-C chemokine receptor CCR7 signalling pathway","type":"narrow"},{"name":"activation of CCR7 signaling pathway","type":"related"},{"name":"positive regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"positive regulation of CCR7 signaling pathway","type":"related"},{"name":"up regulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"up regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"up regulation of CCR7 signaling pathway","type":"related"},{"name":"up-regulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"up-regulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"up-regulation of CCR7 signaling pathway","type":"related"},{"name":"upregulation of C-C chemokine receptor CCR7 signaling pathway","type":"exact"},{"name":"upregulation of C-C chemokine receptor CCR7 signalling pathway","type":"exact"},{"name":"upregulation of CCR7 signaling pathway","type":"related"}],"termid":"GO:1903082"}


id: MONDO:0006601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mild, self-limited skin disorder that is most commonly seen in children and young adults. It is characterized by an initial large round spot on the chest, abdomen, or back, often referred to as a herald patch, that is usually followed within a week by a distinctive pattern of similar but smaller papules on the torso, arms, and legs. There may also be itching, especially when overheated.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"psoriasis","termid":"MONDO:0005083"},{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"exanthem","termid":"MONDO:0006547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pityriasis rosea","secondary_identifiers":["EFO:1000756","ICD9:696.3","ICD10CM:L42","icd11.foundation:919892859","UMLS:C0032026","MEDGEN:18492","MESH:D017515","NCIT:C26855","DOID:8892","SCTID:77252004","Wikipedia:Pityriasis_rosea"],"synonyms":[{"name":"Pityriasis circinata","type":"exact"},{"name":"Pityriasis rosea","type":"exact"}],"termid":"MONDO:0006601","xrefs":{"Monarch":{"xref_id":"0006601"}}}


id: FYPO:0006560
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during the G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity during mitotic interphase","termid":"FYPO:0003331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased protein kinase activity during mitotic G1 phase","synonyms":[{"name":"reduced protein kinase activity during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0006560"}


id: PBO:0042159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 20","termid":"PBO:0042159"}


id: GO:0050168
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + pentanamide = NH4 + valerate.","definition_xrefs":["EC:3.5.1.50","RHEA:10000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"pentanamidase activity","secondary_identifiers":["MetaCyc:PENTANAMIDASE-RXN","KEGG_REACTION:R02938"],"synonyms":[{"name":"pentanamide amidohydrolase activity","type":"related"},{"name":"valeramidase activity","type":"related"}],"termid":"GO:0050168"}


id: PBO:0062729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 3 pseudogene","termid":"PBO:0062729"}


id: PBO:0111841
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain","termid":"PBO:0111841"}


id: PBO:0076746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonic family member 1","termid":"PBO:0076746"}


id: PBO:0090735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase cascade scaffold protein Ahk1","termid":"PBO:0090735"}


id: GO:0042395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The shedding of the old collagen and cuticulin-based cuticle fragments during the molting cycle. Examples of this process are found in invertebrates.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"},{"relation_name":"part_of","term_name":"molting cycle, collagen and cuticulin-based cuticle","termid":"GO:0018996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ecdysis, collagen and cuticulin-based cuticle","termid":"GO:0042395"}


id: PBO:0056457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARVEL domain containing 3","termid":"PBO:0056457"}


id: GO:0042264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-aspartic acid to form peptidyl-hydroxyaspartic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"},{"relation_name":"is_a","term_name":"peptidyl-aspartic acid modification","termid":"GO:0018197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-aspartic acid hydroxylation","synonyms":[{"name":"peptidyl-aspartic acid/asparagine hydroxylation","type":"broad"}],"termid":"GO:0042264"}


id: GO:0051611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the monoamine neurotransmitter serotonin into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"regulates","term_name":"serotonin uptake","termid":"GO:0051610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of serotonin uptake","synonyms":[{"name":"regulation of 5-HT uptake","type":"exact"},{"name":"regulation of 5-hydroxytryptamine uptake","type":"exact"},{"name":"regulation of 5HT uptake","type":"exact"},{"name":"regulation of serotonin import","type":"exact"}],"termid":"GO:0051611"}


id: GO:0090125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of the pre-synaptic cell to the post-synaptic cell via adhesion molecules that contributes to synapse maturation.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"synapse maturation","termid":"GO:0060074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion involved in synapse maturation","synonyms":[{"name":"trans-synaptic adhesion","type":"exact"}],"termid":"GO:0090125"}


id: GO:0060856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the barrier between the blood and the brain. The cells in the brain are packed tightly together preventing the passage of most molecules from the blood into the brain. Only lipid soluble molecules or those that are actively transported can pass through the blood-brain barrier.","definition_xrefs":["PMID:20080302","GOC:sart","GOC:aruk","PMID:30280653","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-brain barrier","synonyms":[{"name":"establishment of BBB","type":"exact"},{"name":"establishment of blood/brain barrier","type":"exact"}],"termid":"GO:0060856"}


id: MONDO:0014498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial cold autoinflammatory syndrome in which the cause of the disease is a mutation in the NLRC4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cold autoinflammatory syndrome","termid":"MONDO:0018768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial cold autoinflammatory syndrome 4","secondary_identifiers":["OMIM:616115","Orphanet:576349","GARD:16061","DOID:0090065","MEDGEN:863713","UMLS:C4015276"],"synonyms":[{"name":"FCAS4","type":"related"},{"name":"NLRC4 familial cold autoinflammatory syndrome","type":"exact"},{"name":"NLRC4-related familial cold autoinflammatory syndrome","type":"exact"},{"name":"familial cold autoinflammatory syndrome 4","type":"exact"},{"name":"familial cold autoinflammatory syndrome caused by mutation in NLRC4","type":"exact"},{"name":"familial cold autoinflammatory syndrome type 4","type":"exact"}],"termid":"MONDO:0014498","xrefs":{"Monarch":{"xref_id":"0014498"}}}


id: PBO:0112858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pombephosphoproteomics_unige_ch_gene","termid":"PBO:0112858"}


id: GO:1900579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (17Z)-protosta-17(20),24-dien-3beta-ol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"tetracyclic triterpenoid metabolic process","termid":"GO:0010685"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(17Z)-protosta-17(20),24-dien-3beta-ol metabolic process","synonyms":[{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol metabolism","type":"exact"}],"termid":"GO:1900579"}


id: PBO:0042281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD1a molecule","termid":"PBO:0042281"}


id: PBO:0002219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Rad50","termid":"PBO:0002219"}


id: PBO:0058932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIS12 kinetochore complex component","termid":"PBO:0058932"}


id: GO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with leukotriene B4, LTB4, to initiate a change in cell activity. Leukotriene B4 is also known as (6Z, 8E, 10E, 14Z)-(5S, 12R)-5,12-dihydroxyicosa-6,8,10,14-tetraen-1-oate.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene receptor activity","termid":"GO:0004974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"leukotriene B4 receptor activity","synonyms":[{"name":"BLT receptor","type":"narrow"}],"termid":"GO:0001632"}


id: PBO:0084606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YPL052W-A has been demonstrated to be the first exon of downstream ORF OAZ1/YPL052W.","termid":"PBO:0084606"}


id: PBO:0068764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1","termid":"PBO:0068764"}


id: PBO:0078421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 2-2","termid":"PBO:0078421"}


id: MONDO:1012449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma of the digit, non-human animal","termid":"MONDO:1011822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squamous cell carcinoma of the digit, dog","secondary_identifiers":["OMIA:001787-9615"],"termid":"MONDO:1012449","xrefs":{"Monarch":{"xref_id":"1012449"}}}


id: GO:0008839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + NAD(P)+ + H2O = (2S,4S)-4-hydroxy-2,3,4,5-tetrahydrodipicolinate + NAD(P)H + H+.","definition_xrefs":["EC:1.17.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-hydroxy-tetrahydrodipicolinate reductase","secondary_identifiers":["MetaCyc:RXN-14014"],"synonyms":[{"name":"2,3,4,5-tetrahydrodipicolinate:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"dihydrodipicolinate reductase activity","type":"exact"},{"name":"dihydrodipicolinic acid reductase activity","type":"related"}],"termid":"GO:0008839"}


id: PBO:0079520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosinase like (pseudogene)","termid":"PBO:0079520"}


id: FYPO:0006528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of hydrolysis of peptide bonds within a protein is decreased during the meiotic cell cycle. All proteolysis may be affected, or only cleavage of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteolysis","termid":"FYPO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"decreased proteolysis during meiotic cell cycle","synonyms":[{"name":"decreased peptidolysis during meiotic cell cycle","type":"exact"},{"name":"decreased protein cleavage during meiotic cell cycle","type":"related"},{"name":"reduced proteolysis during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006528"}


id: GO:0030235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of nitric oxide synthase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"nitric-oxide synthase regulator activity","secondary_identifiers":["Reactome:R-HSA-202144","Reactome:R-HSA-202129"],"synonyms":[{"name":"nitric oxide synthase regulator activity","type":"exact"}],"termid":"GO:0030235"}


id: PBO:0086116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for cytoplasm to vacuole targeting of proteins; forms a complex with Far3p and Far7p to Far11p involved in recovery from pheromone-induced cell cycle arrest; mutant has increased aneuploidy tolerance; VPS64 has a paralog, FAR10, that arose from the whole genome duplication","termid":"PBO:0086116"}


id: PBO:0061369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 29","termid":"PBO:0061369"}


id: FYPO:0003107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form telomeres that are shorter than normal, and that continue to decrease in length over successive generations.","definition_xrefs":["PMID:24013504","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shortened telomeres during vegetative growth","termid":"FYPO:0002239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"progressively shortening telomeres during vegetative growth","synonyms":[{"name":"progressively decreasing telomere length during vegetative growth","type":"exact"},{"name":"progressively shortening telomeres during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003107"}


id: GO:0046346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mannosomine, 2-amino-2-deoxymannose; the D-isomer is a constituent of neuraminic acids as well as mucolipids and mucoproteins.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosamine metabolic process","termid":"GO:0006050"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mannosamine catabolic process","synonyms":[{"name":"mannosamine breakdown","type":"exact"},{"name":"mannosamine catabolism","type":"exact"},{"name":"mannosamine degradation","type":"exact"}],"termid":"GO:0046346"}


id: GO:0004859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a phospholipid.","definition_xrefs":["GOC:ai","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase inhibitor activity","termid":"GO:0055102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140678","GO:0004857","GO:0030234"],"is_obsolete":false,"name":"phospholipase inhibitor activity","termid":"GO:0004859"}


id: MONDO:0013348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the CDHR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 15","secondary_identifiers":["MEDGEN:462262","OMIM:613660","GARD:15686","DOID:0111021","UMLS:C3150912"],"synonyms":[{"name":"CDHR1 cone-rod dystrophy","type":"exact"},{"name":"CORD15","type":"exact"},{"name":"cone-rod dystrophy 15","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in CDHR1","type":"exact"},{"name":"cone-rod dystrophy type 15","type":"exact"},{"name":"retinitis pigmentosa 65","type":"related"}],"termid":"MONDO:0013348","xrefs":{"Monarch":{"xref_id":"0013348"}}}


id: GO:0008428
data:
  {"annotated_genes":["SJAG_02594"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060698"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of ribonuclease.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease inhibitor activity","termid":"GO:0140721"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02594":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0004857","GO:0140678","GO:0098772"],"is_obsolete":false,"name":"ribonuclease inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA nuclease inhibitor activity","type":"exact"}],"termid":"GO:0008428","terms_by_termid":{"GO:0060698":null}}


id: PR:P41887
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock protein HSP 90-alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.04c","secondary_identifiers":["UniProtKB:P41887"],"synonyms":[{"name":"Spom972h-HSP90AA1","type":"exact"}],"termid":"PR:P41887"}


id: FYECO:0000047
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which stearic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ stearic acid","termid":"FYECO:0000047"}


id: PBO:0077032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 1","termid":"PBO:0077032"}


id: PBO:0054759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2171","termid":"PBO:0054759"}


id: GO:0008546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Physical interaction between microtubules and chromatin via DNA binding proteins.","definition_xrefs":["PMID:10322137"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule/chromatin interaction (obsolete GO:0008546)","synonyms":[{"name":"microtubule/chromatin interaction","type":"exact"}],"termid":"GO:0008546"}


id: GO:0000923
data:
  {"annotated_genes":["SJAG_07018","SJAG_02737","SJAG_01215","SJAG_03073","SJAG_03264","SJAG_01756","SJAG_00856","SJAG_03835","SJAG_02609","SJAG_02886","SJAG_02761","SJAG_03052"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100417,100705,101317,101764,102658,106807,109208,109965,110947,113146,117324,117578],"is_not":false,"summary":null,"term":"GO:0000923"}]},"cv_name":"cellular_component","definition":"A microtubule organizing center formed by a band of gamma-tubulin that is recruited to a circumferential band of F-actin at the midpoint of a cell and which nucleates microtubules from the cell division site at the end of mitosis.","definition_xrefs":["PMID:11792817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center","termid":"GO:0005815"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02609":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03052":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"equatorial microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"EMTOC","type":"exact"},{"name":"equatorial microtubule organising centre","type":"exact"}],"termid":"GO:0000923","terms_by_termid":{"GO:0000923":null}}


id: GO:0070458
data:
  {"annotated_genes":["SJAG_04063","SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87728,102557],"is_not":false,"summary":null,"term":"GO:0070458"}]},"cv_name":"biological_process","definition":"Any cellular process that reduces or removes the toxicity of nitrogenous compounds which are dangerous or toxic. This includes the aerobic conversion of toxic compounds to harmless substances.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of nitrogen compound","termid":"GO:0051410"},{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"},{"relation_name":"part_of","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03288":null,"SJAG_04063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"cellular detoxification of nitrogen compound","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular detoxification of nitrogenous compound","type":"exact"}],"termid":"GO:0070458","terms_by_termid":{"GO:0070458":null}}


id: GO:0015798
data:
  {"annotated_genes":["SJAG_03595","SJAG_04506"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73397,72460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904679"}]},"cv_name":"biological_process","definition":"The directed movement of myo-inositol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Myo-inositol is 1,2,3,4,5/4,6-cyclohexanehexol, a growth factor for animals and microorganisms.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"myo-inositol transport","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-429593"],"synonyms":[{"name":"vitamin Bh transport","type":"exact"}],"termid":"GO:0015798","terms_by_termid":{"GO:1904679":null}}


id: PBO:0001428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain protein Heh1/Lem2","termid":"PBO:0001428"}


id: MONDO:1011651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy and juvenile mortality, non-human animal","secondary_identifiers":["OMIA:002256"],"termid":"MONDO:1011651","xrefs":{"Monarch":{"xref_id":"1011651"}}}


id: PBO:0042193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D3","termid":"PBO:0042193"}


id: PATO:0001590
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's coinciding spatially, partially or wholly with another entity.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlap with","synonyms":[{"name":"overlap","type":"exact"}],"termid":"PATO:0001590"}


id: PBO:0053235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 1","termid":"PBO:0053235"}


id: MONDO:0100247
data:
  {"annotated_genes":["SJAG_03066","SJAG_04165","SJAG_04881","SJAG_00846"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032808"},{"annotations":[86297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013563"},{"annotations":[87226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010466"},{"annotations":[86292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014165"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00846":null,"SJAG_03066":null,"SJAG_04165":null,"SJAG_04881":null},"genotype_count":0,"is_obsolete":false,"name":"multiple congenital anomalies-hypotonia-seizures syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080503","OMIMPS:614080","MEDGEN:1683744","UMLS:C5191419"],"termid":"MONDO:0100247","terms_by_termid":{"MONDO:0010466":null,"MONDO:0013563":null,"MONDO:0014165":null,"MONDO:0032808":null},"xrefs":{"Monarch":{"xref_id":"0100247"}}}


id: GO:0051417
data:
  {"annotated_genes":["SJAG_07018","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101326,119065],"is_not":false,"summary":null,"term":"GO:0051417"}]},"cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule, mediated by the spindle pole body.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation by microtubule organizing center","termid":"GO:0051418"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03540":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0065003","GO:0000226","GO:0044085"],"is_obsolete":false,"name":"microtubule nucleation by spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SPB-mediated microtubule nucleation","type":"exact"},{"name":"microtubule nucleation by SPB","type":"exact"},{"name":"spindle pole body-mediated microtubule nucleation","type":"exact"}],"termid":"GO:0051417","terms_by_termid":{"GO:0051417":null}}


id: GO:0042601
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Portion of the cell formed during the process of bacterial sporulation that will ultimately become the core of the endospore. An endospore is a type of dormant cell that is resistant to adverse conditions.","definition_xrefs":["ISBN:0697286029","GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular immature spore","termid":"GO:0042763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"endospore-forming forespore","termid":"GO:0042601"}


id: MONDO:0002642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a trochlear nerve.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"},{"relation_name":"is_a","term_name":"trochlear nerve disorder","termid":"MONDO:0007002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trochlear nerve neoplasm","secondary_identifiers":["DOID:3421","MEDGEN:226811","NCIT:C5825","SCTID:126970001","ICD9:239.7","UMLS:C1263896"],"synonyms":[{"name":"IVth cranial nerve neoplasms","type":"exact"},{"name":"IVth cranial nerve tumors","type":"exact"},{"name":"IVth cranial nerve tumours","type":"exact"},{"name":"fourth cranial nerve neoplasm","type":"exact"},{"name":"fourth cranial nerve neoplasms","type":"exact"},{"name":"fourth cranial nerve tumor","type":"exact"},{"name":"fourth cranial nerve tumors","type":"exact"},{"name":"fourth cranial nerve tumour","type":"exact"},{"name":"fourth cranial nerve tumours","type":"exact"},{"name":"neoplasm of fourth cranial nerve","type":"exact"},{"name":"neoplasm of the fourth cranial nerve","type":"exact"},{"name":"neoplasm of the trochlear nerve","type":"exact"},{"name":"neoplasm of trochlear nerve","type":"exact"},{"name":"trochlear nerve neoplasm (disease)","type":"exact"},{"name":"trochlear nerve neoplasms","type":"exact"},{"name":"trochlear nerve tumor","type":"exact"},{"name":"trochlear nerve tumors","type":"exact"},{"name":"trochlear nerve tumour","type":"exact"},{"name":"trochlear nerve tumours","type":"exact"},{"name":"tumor of fourth cranial nerve","type":"exact"},{"name":"tumor of the fourth cranial nerve","type":"exact"},{"name":"tumor of the trochlear nerve","type":"exact"},{"name":"tumor of trochlear nerve","type":"exact"},{"name":"tumour of fourth cranial nerve","type":"exact"},{"name":"tumour of the fourth cranial nerve","type":"exact"},{"name":"tumour of the trochlear nerve","type":"exact"},{"name":"tumour of trochlear nerve","type":"exact"}],"termid":"MONDO:0002642","xrefs":{"Monarch":{"xref_id":"0002642"}}}


id: FYPO:0003160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is in a culture in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"elongated cell during stationary phase","synonyms":[{"name":"long cell during stationary phase","type":"exact"}],"termid":"FYPO:0003160"}


id: MONDO:0010983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dystonia characterized by autosomal dominant inheritance of paroxysmal choreoathetosis and progressive spastic paraplegia, episodes are often precipitated by alcohol, fatigue, or emotional stress that has material basis in heterozygous mutation in the SLC2A1 gene on chromosome 1p34.","definition_xrefs":["DOID:0090044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal dystonia","termid":"MONDO:0016058"},{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0003441","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"dystonia 9","secondary_identifiers":["NANDO:1200520","MEDGEN:371427","Orphanet:53583","SCTID:715564000","OMIM:601042","UMLS:C1832855","MESH:C563401","GARD:16656"],"synonyms":[{"name":"Cse choreoathetosis, paroxysmal, with episodic ataxia","type":"related"},{"name":"DYT9","type":"exact"},{"name":"choreoathetosis, kinesigenic, with episodic ataxia and spasticity","type":"related"},{"name":"choreoathetosis/spasticity, episodic","type":"related"},{"name":"dystonia 9","type":"exact"},{"name":"dystonia type 9","type":"exact"},{"name":"episodic choreoathetosis/spasticity","type":"exact"},{"name":"paroxysmal dystonic choreathetosis with episodic ataxia and spasticity","type":"related"}],"termid":"MONDO:0010983","xrefs":{"Monarch":{"xref_id":"0010983"}}}


id: GO:0003056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of vascular smooth muscle contraction.","definition_xrefs":["GOC:rl","GOC:mtg_cardio","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction","termid":"GO:0006940"},{"relation_name":"is_a","term_name":"regulation of vasoconstriction","termid":"GO:0019229"},{"relation_name":"regulates","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle contraction","synonyms":[{"name":"regulation of vascular smooth muscle contraction","type":"exact"}],"termid":"GO:0003056"}


id: MONDO:0010570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked malformation syndrome characterized by facial asymmetry (particularly orbital), body asymmetry, midline defects (hypertelorism, frontal bossing, broad grooved or bifid nasal tip, cleft lip and/or palate, high arched palate), skeletal anomalies (clavicle pseudoarthrosis, coronal craniosynostosis, various digital and limb anomalies including syndactyly, clinodactyly of the 5th finger, broad thumbs) and ectodermal dysplasias (dental anomalies, grooved nails, wiry hair). Contrary to most X-linked disorders, females are much more severely affected whereas males are asymptomatic or present with a mild phenotype, frequently only displaying hypertelorism.","definition_xrefs":["Orphanet:1520"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"frontonasal dysplasia","termid":"MONDO:0016643"},{"relation_name":"excluded_subClassOf","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofrontonasal syndrome","secondary_identifiers":["GARD:1578","MESH:C536456","SCTID:715421009","MEDGEN:65095","OMIM:304110","UMLS:C0220767","DOID:14737"],"synonyms":[{"name":"CFND","type":"exact"},{"name":"CFNS","type":"exact"},{"name":"Craniofrontonasal Dysplasia","type":"exact"},{"name":"craniofrontonasal dysostosis","type":"related"},{"name":"craniofrontonasal dysplasia","type":"exact"},{"name":"craniofrontonasal dysplasia, X-linked dominant","type":"exact"},{"name":"craniofrontonasal syndrome","type":"exact"}],"termid":"MONDO:0010570","xrefs":{"Monarch":{"xref_id":"0010570"}}}


id: GO:1905158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Factor XII activation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:617517"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Factor XII activation (obsolete GO:1905158)","synonyms":[{"name":"regulation of Hageman factor activation","type":"exact"}],"termid":"GO:1905158"}


id: MONDO:0008757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most severe form of alopecia areata, an inflammatory disease of the hair follicle, which is characterized by a complete loss of hair of the scalp and all the hair-bearing areas of the body.","definition_xrefs":["Orphanet:701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alopecia universalis congenita","secondary_identifiers":["ICD9:704.09","MedDRA:10001767","SCTID:86166000","MESH:C537055","DOID:0050634","MEDGEN:349262","UMLS:C1859877","OMIM:203655","GARD:614"],"synonyms":[{"name":"ALUNC","type":"related"},{"name":"AU","type":"related"},{"name":"alopecia areata universalis","type":"related"},{"name":"alopecia universalis","type":"related"},{"name":"alopecia universalis congenita","type":"exact"},{"name":"atrichia, generalised","type":"exact"},{"name":"atrichia, generalized","type":"exact"}],"termid":"MONDO:0008757","xrefs":{"Monarch":{"xref_id":"0008757"}}}


id: GO:0072339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactams, any cyclic amides of amino carboxylic acids, having a 1-azacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lactam biosynthetic process","synonyms":[{"name":"cellular lactam anabolism","type":"exact"},{"name":"cellular lactam biosynthesis","type":"exact"},{"name":"cellular lactam biosynthetic process","type":"exact"},{"name":"cellular lactam formation","type":"exact"},{"name":"cellular lactam synthesis","type":"exact"}],"termid":"GO:0072339"}


id: PBO:0072885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBF2 antisense RNA 1","termid":"PBO:0072885"}


id: MONDO:0016386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of hypogonadotropic hypogonadism (with primary amenorrhea and lack of secondary sexual development) and retinitis pigmentosa. It has been described in two sisters born to nonconsanguineous parents.","definition_xrefs":["Orphanet:2235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism-retinitis pigmentosa syndrome","secondary_identifiers":["MESH:C538075","UMLS:C2931722","GARD:1234","MEDGEN:419479"],"synonyms":[{"name":"Chang-Davidson-Carlson syndrome","type":"exact"}],"termid":"MONDO:0016386","xrefs":{"Monarch":{"xref_id":"0016386"}}}


id: GO:0042733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the digit are generated and organized. A digit is one of the terminal divisions of an appendage, such as a finger or toe.","definition_xrefs":["GOC:jl","UBERON:0002544","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic limb morphogenesis","termid":"GO:0030326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic digit morphogenesis","termid":"GO:0042733"}


id: PBO:0034022
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_session","termid":"PBO:0034022"}


id: PBO:0039271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldolase, fructose-bisphosphate C","termid":"PBO:0039271"}


id: PBO:0082309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartic-type endopeptidase; involved in the cleavage of long-chain polyubiquitinated substrates; role in proteasome-independent, ubiquitin (Ub)-dependent proteolysis and DNA-protein crosslink repair; Ub-shuttle receptor for HO and Ufo1p; DNA damage-inducible v-SNARE binding protein and negative regulator of constitutive exocytosis; possible role in the S-phase checkpoint; UBL-UBA family member containing Ub-like (UBL), helical, Ub-associated (UBA) and retroviral-like proteinase (RVP) domains","termid":"PBO:0082309"}


id: GO:0005912
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction composed of the epithelial cadherin-catenin complex. The epithelial cadherins, or E-cadherins, of each interacting cell extend through the plasma membrane into the extracellular space and bind to each other. The E-cadherins bind to catenins on the cytoplasmic side of the membrane, where the E-cadherin-catenin complex binds to cytoskeletal components and regulatory and signaling molecules.","definition_xrefs":["PMID:17854762","GOC:bc","PMID:21422226","GOC:mah","PMID:20571587","ISBN:0198506732","GOC:aruk","PMID:28096264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"adherens junction","secondary_identifiers":["GO:0005913","Wikipedia:Adherens_junction"],"synonyms":[{"name":"cell-cell adherens junction","type":"exact"}],"termid":"GO:0005912"}


id: PBO:0059326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L58","termid":"PBO:0059326"}


id: PBO:0072288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 6","termid":"PBO:0072288"}


id: FYPO:0000349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the Golgi apparatus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system morphology","termid":"FYPO:0000353"},{"relation_name":"output_of","term_name":"abnormal Golgi organization","termid":"FYPO:0000806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal Golgi morphology","synonyms":[{"name":"Golgi morphology: abnormal","type":"related"},{"name":"abnormal Golgi morphology during mitotic cell cycle","type":"related"},{"name":"abnormal Golgi morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0000349"}


id: PBO:0081618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 547","termid":"PBO:0081618"}


id: MONDO:0004383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system germinoma that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system germinoma","termid":"MONDO:0002999"},{"relation_name":"is_a","term_name":"adult central nervous system germ cell tumor","termid":"MONDO:0003405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult central nervous system germinoma","secondary_identifiers":["NCIT:C5792","MEDGEN:234581","UMLS:C1370504","DOID:7867"],"synonyms":[{"name":"adult CNS germinoma","type":"exact"},{"name":"adult central nervous system germinoma","type":"exact"},{"name":"central nervous system germinoma","type":"broad"},{"name":"central nervous system germinoma of adults","type":"exact"},{"name":"germinoma of adult CNS","type":"exact"},{"name":"germinoma of adult central nervous system","type":"exact"},{"name":"germinoma of the adult CNS","type":"exact"},{"name":"germinoma of the adult central nervous system","type":"exact"}],"termid":"MONDO:0004383","xrefs":{"Monarch":{"xref_id":"0004383"}}}


id: GO:1901338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to catecholamine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"catecholamine binding","termid":"GO:1901338"}


id: MONDO:1011281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any achromatopsia that occurs in Rhesus monkey due to a mutation in the PDE6C gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"achromatopsia, non-human animal","termid":"MONDO:1012578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achromatopsia, PDE6C-related, Rhesus monkey","secondary_identifiers":["OMIA:002163-9544"],"synonyms":[{"name":"cone dystrophy 4, PDE6C-related, Rhesus monkey","type":"related"}],"termid":"MONDO:1011281","xrefs":{"Monarch":{"xref_id":"1011281"}}}


id: PBO:0018020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIK complex complex ubiquitin-protein ligase E3 subunit, Pmh1","termid":"PBO:0018020"}


id: MONDO:0017633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare intoxication due to medical products (obsolete MONDO:0017633)","secondary_identifiers":["Orphanet:306640"],"termid":"MONDO:0017633","xrefs":{"Monarch":{"xref_id":"0017633"}}}


id: PBO:0053257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoic acid synthetase","termid":"PBO:0053257"}


id: GO:2000629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of miRNA metabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of miRNA metabolic process","termid":"GO:2000628"},{"relation_name":"negatively_regulates","term_name":"miRNA metabolic process","termid":"GO:0010586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA metabolic process","synonyms":[{"name":"negative regulation of microRNA metabolic process","type":"exact"}],"termid":"GO:2000629"}


id: PR:O42955
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr3 gene.","definition_xrefs":["UniProtKB:O42955","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 3, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.07c","synonyms":[{"name":"Spom972h-ppr3","type":"exact"},{"name":"mitochondrial group I intron splicing factor dmr1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42955"}


id: GO:0001958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Replacement ossification wherein bone tissue replaces cartilage.","definition_xrefs":["ISBN:0878932437","GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replacement ossification","termid":"GO:0036075"},{"relation_name":"part_of","term_name":"endochondral bone morphogenesis","termid":"GO:0060350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endochondral ossification","secondary_identifiers":["Wikipedia:Endochondral_ossification"],"termid":"GO:0001958"}


id: GO:1904820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a peritoneum over time, from its formation to the mature structure.","definition_xrefs":["PMID:15840053","GO_REF:0000094","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serous membrane development","termid":"GO:1904817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peritoneum development","synonyms":[{"name":"peritonaeum development","type":"related"}],"termid":"GO:1904820"}


id: MONDO:0017626
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial primary hypomagnesemia with normocalcuria (FPHN) is a form of familial primary hypomagnesemia (FPH) which is characterized by low magnesium values but normal calcium values in the serum. The disorder consists of three distinct forms which are: autosomal recessive primary hypomagnesemia with normocalcuria and hypocalcemia (ARPHN), familial primary hypomagnesemia with normocalcuria and normocalcemia (FPHNN) and isolated autosomal dominant hypomagnesemia, Glaudemans type.","definition_xrefs":["Orphanet:306522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary hypomagnesemia","termid":"MONDO:0018100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005066"],"is_obsolete":false,"name":"familial primary hypomagnesemia with normocalcuria","termid":"MONDO:0017626","xrefs":{"Monarch":{"xref_id":"0017626"}}}


id: PBO:0076081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small transmembrane regulator of ion transport 1","termid":"PBO:0076081"}


id: PBO:0039581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 1","termid":"PBO:0039581"}


id: PBO:0004727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ergothioneine biosynthesis protein (predicted)","termid":"PBO:0004727"}


id: GO:0072713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thiabendazole stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to thiabendazole","termid":"GO:0072712"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to thiabendazole","synonyms":[{"name":"cellular response to TBZ","type":"exact"}],"termid":"GO:0072713"}


id: GO:0099582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any neurotransmitter receptor activity that is involved in regulating the concentration of calcium in the presynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neurotransmitter receptor activity involved in regulation of presynaptic cytosolic calcium ion concentration","synonyms":[{"name":"neurotransmitter receptor activity involved in regulation of presynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0099582"}


id: MONDO:0011682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Episodic ataxia type 3 (EA3) is a very rare form of Hereditary episodic ataxia characterized by vestibular ataxia, vertigo, tinnitus, and interictal myokymia.","definition_xrefs":["Orphanet:79135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary episodic ataxia","termid":"MONDO:0016227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic ataxia type 3","secondary_identifiers":["UMLS:C1847839","GARD:16702","OMIM:606554","MEDGEN:376220","DOID:0050991","MESH:C564697","SCTID:718755009"],"synonyms":[{"name":"EA3","type":"related"},{"name":"ataxia, episodic, with vertigo and tinnitus","type":"related"},{"name":"episodic ataxia, type 3","type":"related"},{"name":"episodic ataxia-vertigo-tinnitus-myokymia syndrome","type":"exact"}],"termid":"MONDO:0011682","xrefs":{"Monarch":{"xref_id":"0011682"}}}


id: PBO:0031342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_hydroxyurea","termid":"PBO:0031342"}


id: PBO:0001206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain","termid":"PBO:0001206"}


id: GO:0002603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of polysaccharide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002582"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002601"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","synonyms":[{"name":"activation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"narrow"},{"name":"positive regulation of polysaccharide antigen processing and presentation via MHC class II","type":"exact"},{"name":"stimulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"narrow"},{"name":"up regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"up-regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"upregulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"}],"termid":"GO:0002603"}


id: FYPO:0003700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of snoRNA primary transcripts measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"altered snoRNA or precursor level","termid":"FYPO:0005998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased snoRNA primary transcript level","synonyms":[{"name":"increased small nucleolar RNA primary transcript level","type":"exact"},{"name":"increased snoRNA primary transcript accumulation","type":"related"},{"name":"increased snoRNA primary transcript level during mitotic cell cycle","type":"related"},{"name":"increased snoRNA primary transcript level during vegetative growth","type":"exact"},{"name":"increased snoRNA transcript level","type":"broad"}],"termid":"FYPO:0003700"}


id: GO:0140731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of amphiregulin.","definition_xrefs":["PMID:24463227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"amphiregulin production","termid":"GO:0140730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of amphiregulin production","synonyms":[{"name":"regulation of AREG production","type":"broad"}],"termid":"GO:0140731"}


id: MONDO:0024251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurological syndrome caused by severe mercury poisoning.","definition_xrefs":["Wikipedia:Minamata_disease"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mercury poisoning","termid":"MONDO:0018020"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minamata disease","secondary_identifiers":["UMLS:C0086626","SCTID:39640004","MEDGEN:43368"],"synonyms":[{"name":"Chisso-Minamata disease","type":"exact"}],"termid":"MONDO:0024251","xrefs":{"Monarch":{"xref_id":"0024251"}}}


id: PR:O59781
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial Rho GTPase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Rho GTPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.04c","secondary_identifiers":["UniProtKB:O59781"],"synonyms":[{"name":"GTPase EF-hand protein of mitochondria 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC320.04c","type":"related"},{"name":"Spom972h-RHOT1","type":"exact"}],"termid":"PR:O59781"}


id: PBO:0063038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 (RAC1) activated kinase 5","termid":"PBO:0063038"}


id: PBO:0062928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 3-hydroxylase 1","termid":"PBO:0062928"}


id: PBO:0116797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily D member 6 (gene/pseudogene)","termid":"PBO:0116797"}


id: GO:0034008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + H2O = (R)-linalool + diphosphate.","definition_xrefs":["EC:4.2.3.26","RHEA:15809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"R-linalool synthase activity","secondary_identifiers":["KEGG_REACTION:R07632","MetaCyc:4.2.3.26-RXN"],"synonyms":[{"name":"(-)-3R-linalool synthase activity","type":"related"},{"name":"(3R)-linalool synthase activity","type":"related"},{"name":"geranyl-diphosphate diphosphate-lyase [(3R)-linalool-forming] activity","type":"related"}],"termid":"GO:0034008"}


id: GO:0021682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a nerve to attain its fully functional state.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dph","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"nerve development","termid":"GO:0021675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nerve maturation","termid":"GO:0021682"}


id: PBO:0052728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 20","termid":"PBO:0052728"}


id: PBO:0075452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 4","termid":"PBO:0075452"}


id: PBO:0044865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 1C","termid":"PBO:0044865"}


id: GO:0004479
data:
  {"annotated_genes":["SJAG_01368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78573],"is_not":false,"summary":null,"term":"GO:0004479"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + L-methionyl-tRNA + H2O = tetrahydrofolate + N-formylmethionyl-tRNA.","definition_xrefs":["EC:2.1.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0140101","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"methionyl-tRNA formyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0070128","MetaCyc:METHIONYL-TRNA-FORMYLTRANSFERASE-RXN","RHEA:24380","Reactome:R-HSA-5389841","GO:0001718"],"synonyms":[{"name":"formylmethionyl-transfer ribonucleic synthetase activity","type":"related"},{"name":"methionyl ribonucleic formyltransferase activity","type":"related"},{"name":"methionyl-tRNA Met formyltransferase activity","type":"related"},{"name":"10-formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase activity","type":"related"},{"name":"N(10)-formyltetrahydrofolic-methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"N-terminal peptidyl-methionine N-formylation","type":"related"},{"name":"N10-formyltetrahydrofolic-methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"conversion of met-tRNAf to fmet-tRNA","type":"related"},{"name":"conversion of mitochondrial met-tRNAf to fmet-tRNA","type":"related"},{"name":"methionyl-tRNA transformylase activity","type":"related"},{"name":"methionyl-transfer RNA transformylase activity","type":"related"},{"name":"methionyl-transfer ribonucleate methyltransferase activity","type":"related"},{"name":"methionyl-transfer ribonucleic transformylase activity","type":"related"},{"name":"mitochondrial N-terminal peptidyl-methionine N-formylation","type":"related"}],"termid":"GO:0004479","terms_by_termid":{"GO:0004479":null}}


id: MONDO:0043579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the small intestine.","definition_xrefs":["NCIT:C26765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastroenteritis","termid":"MONDO:0002269"},{"relation_name":"is_a","term_name":"small intestine disorder","termid":"MONDO:0024635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"enteritis","secondary_identifiers":["MESH:D004751","MEDGEN:4964","SCTID:64613007","UMLS:C0014335"],"synonyms":[{"name":"Enteritides","type":"related"},{"name":"enteritis","type":"exact"},{"name":"enteritis of small intestine","type":"exact"},{"name":"enteritis, inflammatory disorder of small intestine","type":"related"},{"name":"inflammation of small intestine","type":"exact"},{"name":"small intestine inflammation","type":"exact"}],"termid":"MONDO:0043579","xrefs":{"Monarch":{"xref_id":"0043579"}}}


id: MONDO:0005816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Japanese encephalitis (obsolete MONDO:0005816)","termid":"MONDO:0005816","xrefs":{"Monarch":{"xref_id":"0005816"}}}


id: PBO:0017806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid family protease associated with COP1 coated vesicle (predicted)","termid":"PBO:0017806"}


id: GO:0062049
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that inhibits protein phosphatase activity by directly binding to a protein phosphatase.","definition_xrefs":["PMID:19933100","GOC:bhm","PMID:19407142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein phosphatase inhibitor complex","termid":"GO:0062049"}


id: PBO:0031380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell","termid":"PBO:0031380"}


id: MONDO:0002994
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually malignant neuroendocrine tumor arising from the delta cells of the pancreas. It may be associated with inappropriate secretion of somatostatin and an associated clinical syndrome, or it may be hormonally inactive (non-functioning).","definition_xrefs":["NCIT:C28396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"},{"relation_name":"is_a","term_name":"pancreatic neuroendocrine tumor","termid":"MONDO:0019954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic delta cell neuroendocrine tumor","secondary_identifiers":["UMLS:C1335301","MEDGEN:233303","DOID:4433"],"synonyms":[{"name":"pancreatic Delta cell NET","type":"exact"},{"name":"pancreatic Delta cell neoplasm","type":"exact"},{"name":"pancreatic Delta cell neuroendocrine tumor","type":"exact"},{"name":"pancreatic Delta cell neuroendocrine tumour","type":"exact"},{"name":"pancreatic Delta cell tumor","type":"exact"},{"name":"pancreatic Delta cell tumour","type":"exact"},{"name":"pancreatic delta cell neoplasm","type":"exact"}],"termid":"MONDO:0002994","xrefs":{"Monarch":{"xref_id":"0002994"}}}


id: MONDO:0001764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the ethmoid sinus. Representative examples of benign neoplasms include Schneiderian papilloma and salivary gland-type adenoma. Representative examples of malignant neoplasms include carcinoma and lymphoma.","definition_xrefs":["NCIT:C4416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus neoplasm","termid":"MONDO:0005289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethmoidal sinus neoplasm","secondary_identifiers":["UMLS:C0345668","MONDO:0021215","DOID:1364","MEDGEN:83386","SCTID:126677000"],"synonyms":[{"name":"ethmoid sinus neoplasm","type":"exact"},{"name":"ethmoid sinus neoplasm (disease)","type":"exact"},{"name":"ethmoid sinus tumor","type":"exact"},{"name":"ethmoid sinus tumour","type":"exact"},{"name":"ethmoidal sinus neoplasm","type":"exact"},{"name":"ethmoidal sinus tumor","type":"exact"},{"name":"ethmoidal sinus tumour","type":"exact"},{"name":"neoplasm of ethmoid sinus","type":"exact"},{"name":"neoplasm of ethmoidal sinus","type":"exact"},{"name":"neoplasm of the ethmoid sinus","type":"exact"},{"name":"neoplasm of the ethmoidal sinus","type":"exact"},{"name":"tumor of ethmoid sinus","type":"exact"},{"name":"tumor of ethmoidal sinus","type":"exact"},{"name":"tumor of the ethmoid sinus","type":"exact"},{"name":"tumor of the ethmoidal sinus","type":"exact"},{"name":"tumour of ethmoid sinus","type":"exact"},{"name":"tumour of ethmoidal sinus","type":"exact"},{"name":"tumour of the ethmoid sinus","type":"exact"},{"name":"tumour of the ethmoidal sinus","type":"exact"}],"termid":"MONDO:0001764","xrefs":{"Monarch":{"xref_id":"0001764"}}}


id: MONDO:0006164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that arises from the colon or rectum. It is characterized by the presence of serrated glands and the absence of generalized dysplasia. Some authors have suggested that it is a precursor lesion for some colorectal adenocarcinomas with microsatellite instability.","definition_xrefs":["NCIT:C83176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal adenoma","termid":"MONDO:0005484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colorectal sessile serrated adenoma/polyp","secondary_identifiers":["MEDGEN:415420","UMLS:C2826783","EFO:1000197"],"synonyms":[{"name":"colorectal SSA","type":"exact"},{"name":"colorectal SSA/P","type":"exact"},{"name":"colorectal SSP","type":"exact"},{"name":"colorectal mixed hyperplastic adenomatous polyp","type":"exact"},{"name":"colorectal mixed hyperplastic adenomatous polyp/serrated adenoma","type":"exact"},{"name":"colorectal sessile serrated adenoma","type":"exact"},{"name":"colorectal sessile serrated adenoma/polyp","type":"exact"},{"name":"colorectal sessile serrated polyp","type":"exact"}],"termid":"MONDO:0006164","xrefs":{"Monarch":{"xref_id":"0006164"}}}


id: PR:P30261
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc27 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P30261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.02c","synonyms":[{"name":"Spom972h-cdc27","type":"exact"},{"name":"cell division control protein 27 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30261"}


id: GO:0045117
data:
  {"annotated_genes":["SJAG_03400","SJAG_04673","SJAG_02962","SJAG_00835","SJAG_03652","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[104175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[103980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[101016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[90469,90468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of azoles, heterocyclic compounds found in many biologically important substances, across a lipid bilayer, across a membrane.","definition_xrefs":["ISBN:3527307206","Wikipedia:Azole","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02962":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03652":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"azole transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"azole transport","type":"related"}],"termid":"GO:0045117","terms_by_termid":{"GO:0071934":null,"GO:0089708":null,"GO:0090513":null,"GO:0140125":null,"GO:1990545":null}}


id: GO:0032839
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"All of the contents of a dendrite, excluding the surrounding plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection cytoplasm","termid":"GO:0120111"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"dendrite cytoplasm","synonyms":[{"name":"dendritic cytoplasm","type":"exact"}],"termid":"GO:0032839"}


id: PBO:0069032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 277, pseudogene","termid":"PBO:0069032"}


id: PBO:0080992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 24","termid":"PBO:0080992"}


id: PBO:0089631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthine synthase Dph5","termid":"PBO:0089631"}


id: GO:0035985
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptionally-silent heterochromatin structure present in senescent cells. Contains the condensed chromatin of one chromosome and is enriched for histone modifications. Thought to repress expression of proliferation-promoting genes.","definition_xrefs":["GOC:yaf","PMID:15621527","PMID:21248468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"senescence-associated heterochromatin focus","synonyms":[{"name":"SAHF","type":"exact"},{"name":"senescence-associated heterochromatin foci","type":"exact"}],"termid":"GO:0035985"}


id: PBO:0073412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 16","termid":"PBO:0073412"}


id: GO:0032197
data:
  {"annotated_genes":["SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116928],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0141005"}]},"cv_name":"biological_process","definition":"A type of transposition in which a transposable element (transposon) copies and pastes itself into a different genomic location by transcription and convertsion of the transcribed RNA back into DNA through reverse transcription.","definition_xrefs":["PMID:32588192","PMID:30416149","PMID:30958115","ISBN:1555812090","PMID:26912865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposition","termid":"GO:0032196"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00769":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retrotransposition","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006321","Wikipedia:Transposon##Class_I\\:_Retrotransposons","GO:0006320","GO:0006319","GO:0006322"],"synonyms":[{"name":"Class I transposition","type":"exact"},{"name":"RNA-mediated transposition","type":"exact"},{"name":"Tf transposition","type":"narrow"},{"name":"Ty element transposition","type":"narrow"},{"name":"Ty1 element transposition","type":"narrow"},{"name":"Ty2 element transposition","type":"narrow"},{"name":"Ty3 element transposition","type":"narrow"},{"name":"retrotransposon transposition","type":"exact"},{"name":"transposition via RNA intermediate","type":"exact"},{"name":"transposition, RNA-mediated","type":"exact"}],"termid":"GO:0032197","terms_by_termid":{"GO:0141005":null}}


id: PBO:0080423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 7","termid":"PBO:0080423"}


id: GO:0071710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a macromolecule destined to form part of a membrane in a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"membrane biogenesis","termid":"GO:0044091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"membrane macromolecule biosynthetic process","synonyms":[{"name":"membrane macromolecule anabolism","type":"exact"},{"name":"membrane macromolecule biosynthesis","type":"exact"},{"name":"membrane macromolecule formation","type":"exact"},{"name":"membrane macromolecule synthesis","type":"exact"}],"termid":"GO:0071710"}


id: GO:0102152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + 1-palmitoyl-2-linoleoyl-phosphatidylcholine + NADPH + O2 = 1-palmitoyl-2-vernoloyl-phosphatidylcholine + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete Delta12-linoleate epoxygenase activity (obsolete GO:0102152)","termid":"GO:0102152"}


id: PBO:0069987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1282, pseudogene","termid":"PBO:0069987"}


id: PBO:0066335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 1","termid":"PBO:0066335"}


id: PBO:0090075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex transmembrane subunit, C-terminal UBA domain Dsc2","termid":"PBO:0090075"}


id: PBO:0048911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member F","termid":"PBO:0048911"}


id: PBO:0052121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCND3 antisense RNA 1","termid":"PBO:0052121"}


id: PBO:0065645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 23","termid":"PBO:0065645"}


id: MONDO:0014201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infantile epilepsy syndrome","termid":"MONDO:0020071"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 18","secondary_identifiers":["UMLS:C3809624","OMIM:615476","Orphanet:369894","DOID:0080413","MEDGEN:815954","GARD:13676"],"synonyms":[{"name":"DEE18","type":"exact"},{"name":"EIEE18","type":"exact"},{"name":"developmental and epileptic encephalopathy 18","type":"exact"},{"name":"early infantile epileptic encephalopathy without suppression burst","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 18","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 18","type":"exact"}],"termid":"MONDO:0014201","xrefs":{"Monarch":{"xref_id":"0014201"}}}


id: PBO:0089688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase alpha subunit","termid":"PBO:0089688"}


id: PBO:0073394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 9","termid":"PBO:0073394"}


id: PBO:0112000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh5","termid":"PBO:0112000"}


id: GO:0016742
data:
  {"annotated_genes":["SJAG_01766","SJAG_05200","SJAG_02901","SJAG_03914","SJAG_01368","SJAG_04681","SJAG_01814"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003864"},{"annotations":[57754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004047"},{"annotations":[73746,72516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004372"},{"annotations":[78573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004479"},{"annotations":[70322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004643"},{"annotations":[72113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004644"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a hydroxymethyl- or formyl group from one compound (donor) to another (acceptor).","definition_xrefs":["EC:2.1.2.-","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring one-carbon groups","termid":"GO:0016741"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01368":null,"SJAG_01766":null,"SJAG_01814":null,"SJAG_02901":null,"SJAG_03914":null,"SJAG_04681":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"hydroxymethyl-, formyl- and related transferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"termid":"GO:0016742","terms_by_termid":{"GO:0003864":null,"GO:0004047":null,"GO:0004372":null,"GO:0004479":null,"GO:0004643":null,"GO:0004644":null}}


id: FYPO:0005820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of neddylation of one or more specific proteins, or of specific protein sites, is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein neddylation during vegetative growth","termid":"FYPO:0005819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased protein neddylation during vegetative growth","synonyms":[{"name":"increased protein neddylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005820"}


id: PBO:0065105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAR2B antisense RNA 1","termid":"PBO:0065105"}


id: MONDO:0013407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the SAG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 47","secondary_identifiers":["DOID:0110369","GARD:15702","ICD10CM:H35.5","MEDGEN:462411","OMIM:613758","UMLS:C3151061"],"synonyms":[{"name":"RP47","type":"exact"},{"name":"SAG retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa 47","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in SAG","type":"exact"},{"name":"retinitis pigmentosa type 47","type":"exact"}],"termid":"MONDO:0013407","xrefs":{"Monarch":{"xref_id":"0013407"}}}


id: PBO:0044138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 4","termid":"PBO:0044138"}


id: GO:0004021
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111612],"is_not":false,"summary":null,"term":"GO:0004021"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-alanine = L-glutamate + pyruvate.","definition_xrefs":["RHEA:19453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine-oxo-acid transaminase activity","termid":"GO:0047635"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"L-alanine:2-oxoglutarate aminotransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-70524","Reactome:R-HSA-507775","Reactome:R-HSA-70523","EC:2.6.1.2","MetaCyc:ALANINE-AMINOTRANSFERASE-RXN","KEGG_REACTION:R00258","Reactome:R-HSA-507749"],"synonyms":[{"name":"ALT","type":"related"},{"name":"GPT","type":"related"},{"name":"L-alanine aminotransferase activity","type":"broad"},{"name":"L-alanine transaminase activity","type":"broad"},{"name":"L-alanine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"alanine aminotransferase activity","type":"broad"},{"name":"alanine transaminase activity","type":"broad"},{"name":"alanine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"alanine-pyruvate aminotransferase activity","type":"related"},{"name":"beta-alanine aminotransferase","type":"broad"},{"name":"glutamic acid-pyruvic acid transaminase activity","type":"related"},{"name":"glutamic--alanine transaminase activity","type":"related"},{"name":"glutamic--pyruvic transaminase activity","type":"related"},{"name":"glutamic-pyruvic aminotransferase activity","type":"related"},{"name":"pyruvate transaminase activity","type":"broad"},{"name":"pyruvate-alanine aminotransferase activity","type":"related"},{"name":"pyruvate-glutamate transaminase activity","type":"related"}],"termid":"GO:0004021","terms_by_termid":{"GO:0004021":null}}


id: MONDO:0030258
data:
  {"annotated_genes":["SJAG_03601"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86839],"is_not":false,"summary":null,"term":"MONDO:0030258"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia, type 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112325","MEDGEN:1778516","OMIM:619301","Orphanet:613274","UMLS:C5543322","GARD:18032"],"synonyms":[{"name":"PCH14","type":"exact"},{"name":"pontocerebellar hypoplasia, type 14","type":"exact"}],"termid":"MONDO:0030258","terms_by_termid":{"MONDO:0030258":null},"xrefs":{"Monarch":{"xref_id":"0030258"}}}


id: PBO:0050407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 9","termid":"PBO:0050407"}


id: PBO:0065052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 6","termid":"PBO:0065052"}


id: MONDO:0008418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"systemic sclerosis","termid":"MONDO:0005100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"scleroderma, familial progressive","secondary_identifiers":["MEDGEN:356661","UMLS:C1866983","OMIM:181750"],"synonyms":[{"name":"Crest syndrome","type":"related"},{"name":"scleroderma, familial progressive","type":"exact"},{"name":"systemic sclerosis, susceptibility to","type":"related"}],"termid":"MONDO:0008418","xrefs":{"Monarch":{"xref_id":"0008418"}}}


id: SO:0002386
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where a stop codon in an upstream open reading frame is introduced, moved or lost.","direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_uORF_variant","termid":"SO:0002385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_stop_codon_variant","synonyms":[{"name":"uFrameshift","type":"exact"}],"termid":"SO:0002386"}


id: SO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An instance of a self-interacting DNA region flanked by left and right TAD boundaries.","definition_xrefs":["GREEKC:cl","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"topologically_defined_region","termid":"SO:0001412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topologically_associated_domain","synonyms":[{"name":"TAD","type":"exact"},{"name":"topologically associated domain","type":"exact"}],"termid":"SO:0002304"}


id: PR:O94574
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1773.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacid dehydrogenase C1773.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.17c","synonyms":[{"name":"Spom972h-SPBC1773.17c","type":"exact"}],"termid":"PR:O94574"}


id: PBO:0083904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flavin-containing monooxygenase; localized to the cytoplasmic face of the ER membrane; catalyzes oxidation of biological thiols to maintain the ER redox buffer ratio for correct folding of disulfide-bonded proteins","termid":"PBO:0083904"}


id: MONDO:0000013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete choroidal dystrophy (obsolete MONDO:0000013)","termid":"MONDO:0000013","xrefs":{"Monarch":{"xref_id":"0000013"}}}


id: MONDO:0001145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"paralytic strabismus","termid":"MONDO:0001143"},{"relation_name":"is_a","term_name":"oculomotor nerve paralysis","termid":"MONDO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"total third-nerve palsy","secondary_identifiers":["MEDGEN:124396","UMLS:C0271371","DOID:10866","SCTID:194119004","ICD9:378.52"],"synonyms":[{"name":"third nerve palsy with pupil involved","type":"exact"},{"name":"third or oculomotor nerve palsy, total","type":"exact"},{"name":"total third nerve palsy","type":"exact"}],"termid":"MONDO:0001145","xrefs":{"Monarch":{"xref_id":"0001145"}}}


id: GO:0038105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Binding to a transforming growth factor-beta (TGFbeta) protein in the extracellular region, and inhibiting TGFbeta signaling by preventing TGFbeta from binding to its cell surface receptor.","definition_xrefs":["GOC:signaling","GOC:bf","PMID:19855014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of extracellular ligand from receptor","termid":"GO:0035581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"sequestering of TGFbeta from receptor via TGFbeta binding","synonyms":[{"name":"extracellular sequestering of TGFbeta","type":"broad"},{"name":"extracellular sequestering of transforming growth factor-beta","type":"broad"}],"termid":"GO:0038105"}


id: PBO:0075753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP receptor subunit beta","termid":"PBO:0075753"}


id: MONDO:0012843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any childhood absence epilepsy in which the cause of the disease is a mutation in the GABRB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, childhood absence, susceptibility to, 5","secondary_identifiers":["OMIM:612269","UMLS:C2677087","MEDGEN:393654"],"synonyms":[{"name":"ECA5","type":"exact"},{"name":"GABRB3 childhood absence epilepsy","type":"related"},{"name":"childhood absence epilepsy caused by mutation in GABRB3","type":"exact"},{"name":"epilepsy, childhood absence, susceptibility to, 5","type":"exact"},{"name":"epilepsy, childhood absence, susceptibility to, type 5","type":"exact"},{"name":"susceptibility to childhood absence epilepsy 5","type":"exact"}],"termid":"MONDO:0012843","xrefs":{"Monarch":{"xref_id":"0012843"}}}


id: GO:0072330
data:
  {"annotated_genes":["SJAG_03553","SJAG_01300","SJAG_02769","SJAG_02717","SJAG_04107","SJAG_01238","SJAG_02106","SJAG_02988","SJAG_00902","SJAG_03130","SJAG_01271","SJAG_03198","SJAG_05200","SJAG_03972","SJAG_01458","SJAG_01356","SJAG_03313","SJAG_04674","SJAG_01946","SJAG_02007","SJAG_02885","SJAG_02408","SJAG_04007","SJAG_00630","SJAG_00099","SJAG_01935","SJAG_04404","SJAG_03180","SJAG_00305","SJAG_00673","SJAG_04972","SJAG_03679","SJAG_03943","SJAG_03526"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008153"},{"annotations":[76715,79680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[107837,67964,77293,95347,70495,64297,77705,109080,91767,102392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006633"},{"annotations":[111698,80037,73949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030497"},{"annotations":[77940,92271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[77937,92272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"},{"annotations":[62670,59307,60742,61072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019249"},{"annotations":[75491,98194,97494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[104665,72649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042759"},{"annotations":[71243],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[98018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"},{"annotations":[72750,77839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[70652,75519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"},{"annotations":[73946,72948,103813,92275,77938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monocarboxylic acids, any organic acid containing one carboxyl (-COOH) group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00099":null,"SJAG_00305":null,"SJAG_00630":null,"SJAG_00673":null,"SJAG_00902":null,"SJAG_01238":null,"SJAG_01271":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01458":null,"SJAG_01935":null,"SJAG_01946":null,"SJAG_02007":null,"SJAG_02106":null,"SJAG_02408":null,"SJAG_02717":null,"SJAG_02769":null,"SJAG_02885":null,"SJAG_02988":null,"SJAG_03130":null,"SJAG_03180":null,"SJAG_03198":null,"SJAG_03313":null,"SJAG_03526":null,"SJAG_03553":null,"SJAG_03679":null,"SJAG_03943":null,"SJAG_03972":null,"SJAG_04007":null,"SJAG_04107":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04972":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"monocarboxylic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"monocarboxylic acid anabolism","type":"exact"},{"name":"monocarboxylic acid biosynthesis","type":"exact"},{"name":"monocarboxylic acid formation","type":"exact"},{"name":"monocarboxylic acid synthesis","type":"exact"}],"termid":"GO:0072330","terms_by_termid":{"GO:0006633":null,"GO:0006636":null,"GO:0008153":null,"GO:0009102":null,"GO:0009107":null,"GO:0015940":null,"GO:0019249":null,"GO:0019367":null,"GO:0030497":null,"GO:0034625":null,"GO:0042759":null,"GO:0042761":null,"GO:0045717":null,"GO:1900535":null}}


id: GO:0004746
data:
  {"annotated_genes":["SJAG_02491","SJAG_02360"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76785,110753],"is_not":false,"summary":null,"term":"GO:0004746"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 6,7-dimethyl-8-(1-D-ribityl)lumazine + H+ = 5-amino-6-(D-ribitylamino)uracil + riboflavin.","definition_xrefs":["RHEA:20772","EC:2.5.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02360":null,"SJAG_02491":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016765"],"is_obsolete":false,"name":"riboflavin synthase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00066","MetaCyc:RIBOFLAVIN-SYN-RXN"],"synonyms":[{"name":"6,7-dimethyl-8-(1-D-ribityl)lumazine:6,7-dimethyl-8-(1-D-ribityl)lumazine 2,3-butanediyltransferase activity","type":"related"},{"name":"heavy riboflavin synthase","type":"narrow"},{"name":"light riboflavin synthase","type":"narrow"},{"name":"riboflavin synthetase activity","type":"related"},{"name":"riboflavine synthase activity","type":"related"},{"name":"riboflavine synthetase activity","type":"related"},{"name":"vitamin B2 synthase activity","type":"exact"}],"termid":"GO:0004746","terms_by_termid":{"GO:0004746":null}}


id: FYPO:0004666
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is decreased along the length of the chromosome arms during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid cohesion","termid":"FYPO:0002092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"decreased meiotic sister chromatid cohesion along chromosome arms","synonyms":[{"name":"abnormal sister chromatid cohesion along chromosome arms during meiosis","type":"exact"},{"name":"decreased meiotic sister chromatid cohesion, arms","type":"exact"},{"name":"reduced meiotic sister chromatid cohesion along chromosome arms","type":"exact"}],"termid":"FYPO:0004666"}


id: MONDO:0008759
data:
  {"annotated_genes":["SJAG_02464"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87339],"is_not":false,"summary":null,"term":"MONDO:0008759"}]},"cv_name":"mondo","definition":"A rare, genetic, inborn error of metabolism disorder characterized by neonatal-onset of developmental delay, hypotonia, hepatomegaly, lactic acidemia, increased creatine kinase levels, elevated alpha-ketoglutaric acid in urine, and a decreased plasma beta-hydroxybutyrate-to-acetoacetate ratio. Pyruvate dehydrogenase deficiency can be associated, leading to hypoglycemia and neurologic anomalies, including seizures.","definition_xrefs":["Orphanet:31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"tricarboxylic acid cycle disorder","termid":"MONDO:0016790"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005244"],"is_obsolete":false,"name":"oxoglutaricaciduria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:203740","UMLS:C2752074","GARD:617","SCTID:733630004","MEDGEN:414553","DOID:0081326","MESH:C536582"],"synonyms":[{"name":"2 alpha ketoglutarate dehydrogenase deficiency","type":"related"},{"name":"2-ketoglutarate dehydrogenase deficiency","type":"related"},{"name":"ALPHA-ketoglutarate dehydrogenase deficiency","type":"related"},{"name":"Alpha KGD deficiency","type":"related"},{"name":"Alpha-Kgd deficiency","type":"related"},{"name":"Alpha-ketoglutarate dehydrogenase deficiency","type":"exact"},{"name":"Oxoglutaric aciduria","type":"related"},{"name":"oxoglutarate dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0008759","terms_by_termid":{"MONDO:0008759":null},"xrefs":{"Monarch":{"xref_id":"0008759"}}}


id: SO:0000818
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that rescues.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"wild_type","termid":"SO:0000817"},{"relation_name":"is_a","term_name":"rescue_gene","termid":"SO:0000816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wild_type_rescue_gene","synonyms":[{"name":"wild type rescue gene","type":"exact"}],"termid":"SO:0000818"}


id: PBO:0050938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 8","termid":"PBO:0050938"}


id: GO:0001955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a blood vessel to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel maturation","termid":"GO:0001955"}


id: PBO:0017830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A dioxygenase Ofd2","termid":"PBO:0017830"}


id: PBO:0082539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; plays a role in maintenance of newly synthesized areas of cell wall; localizes to periphery of small buds, septum region of larger buds, and shmoo tip; CCW12 has a paralog, YDR134C, that arose from the whole genome duplication","termid":"PBO:0082539"}


id: PR:Q9Y804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Fanconi-associated nuclease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02674","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi-associated nuclease 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.06c","secondary_identifiers":["UniProtKB:Q9Y804"],"synonyms":[{"name":"Spom972h-FAN1","type":"exact"}],"termid":"PR:Q9Y804"}


id: GO:0002228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The promotion of an immune response by natural killer cells through direct recognition of target cells or through the release of cytokines.","definition_xrefs":["ISBN:0781735149","GOC:add","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell mediated immunity","synonyms":[{"name":"NK cell mediated immunity","type":"exact"}],"termid":"GO:0002228"}


id: GO:0039011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a pronephric nephron proximal tubule are generated and organized. A pronephric nephron tubule is an epithelial tube that is part of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephric nephron tubule morphogenesis","termid":"GO:0039008"},{"relation_name":"is_a","term_name":"proximal tubule morphogenesis","termid":"GO:0072158"},{"relation_name":"part_of","term_name":"pronephric proximal tubule development","termid":"GO:0035776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric proximal tubule morphogenesis","synonyms":[{"name":"pronephros proximal tubule morphogenesis","type":"exact"}],"termid":"GO:0039011"}


id: PBO:0030455
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_homocitrate_synthase_activity","termid":"PBO:0030455"}


id: PR:000044588
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the sid4 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation initiation protein sid4 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC244.01c","synonyms":[{"name":"Spom-sid4","type":"exact"}],"termid":"PR:000044588"}


id: PBO:0084694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial DNA polymerase gamma; single subunit of mitochondrial DNA polymerase in yeast, in contrast to metazoan complex of catalytic and accessory subunits; polymorphic in yeast, petites occur more frequently in some lab strains; human ortholog POLG complements yeast mip1 mutant; mutations in human POLG associated with Alpers-Huttenlocher syndrome (AHS), progressive external ophthalmoplegia (PEO), parkinsonism, other mitochondrial diseases","termid":"PBO:0084694"}


id: MONDO:0013743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of systemic lupus erythematosus (disease) that is caused by mutations in DNASE1L3.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autosomal systemic lupus erythematosus type 16","secondary_identifiers":["MEDGEN:482372","Orphanet:300345","GARD:17368","OMIM:614420","UMLS:C3280742"],"synonyms":[{"name":"SLEB16","type":"exact"},{"name":"autosomal SLE","type":"broad"},{"name":"familial SLE","type":"broad"},{"name":"familial systemic lupus erythematosus","type":"broad"},{"name":"systemic lupus erythematosus 16","type":"exact"},{"name":"systemic lupus erythematosus type 16","type":"exact"}],"termid":"MONDO:0013743","xrefs":{"Monarch":{"xref_id":"0013743"}}}


id: MONDO:0030362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type I interferonopathy characterized by severe developmental delay and progressive neurologic deterioration. Patients present in infancy with irritability and spasticity. Brain imaging shows diffusely abnormal white matter, cerebral atrophy, and intracranial calcification. Premature death has been associated with renal and/or hepatic failure.","definition_xrefs":["PMID:33230297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Aicardi-Goutieres syndrome","termid":"MONDO:0018866"},{"relation_name":"is_a","term_name":"RNU7-1-related type 1 interferonopathy","termid":"MONDO:0700263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"Aicardi-Goutieres syndrome 9","secondary_identifiers":["MEDGEN:1794176","OMIM:619487","UMLS:C5561966"],"synonyms":[{"name":"AGS9","type":"exact"},{"name":"Aicardi-Goutieres syndrome 9","type":"exact"}],"termid":"MONDO:0030362","xrefs":{"Monarch":{"xref_id":"0030362"}}}


id: PBO:0039554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD49 pseudogene 1","termid":"PBO:0039554"}


id: FYPO:0005785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs for a shorter time than normal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PMID:26882497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"decreased duration of protein-protein interaction","synonyms":[{"name":"decreased duration of protein binding","type":"exact"},{"name":"reduced duration of protein-protein interaction","type":"exact"}],"termid":"FYPO:0005785"}


id: PBO:0113494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational activator involved in mitochondrial translation; role in mitochondrial ribosome assembly","termid":"PBO:0113494"}


id: GO:1900296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of heptasaccharide transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of heptasaccharide transport","termid":"GO:1900294"},{"relation_name":"positively_regulates","term_name":"heptasaccharide transport","termid":"GO:2001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of heptasaccharide transport","synonyms":[{"name":"activation of heptasaccharide transport","type":"narrow"},{"name":"up regulation of heptasaccharide transport","type":"exact"},{"name":"up-regulation of heptasaccharide transport","type":"exact"},{"name":"upregulation of heptasaccharide transport","type":"exact"}],"termid":"GO:1900296"}


id: GO:0060884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which cells are removed from the inner loop of a semicircular canal.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"semicircular canal morphogenesis","termid":"GO:0048752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of cells from fusion plate","termid":"GO:0060884"}


id: SO:0000096
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from proplastid sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"proplastid_sequence","termid":"SO:0000748"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proplastid_gene","synonyms":[{"name":"proplastid gene","type":"exact"}],"termid":"SO:0000096"}


id: PBO:0040943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 14","termid":"PBO:0040943"}


id: PBO:0059724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 32","termid":"PBO:0059724"}


id: GO:0019643
data:
  {"annotated_genes":["SJAG_03920"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117146],"is_not":false,"summary":null,"term":"GO:0019643"}]},"cv_name":"biological_process","definition":"A pathway leading to the fixation of two molecules of CO2 and the production of one molecule of acetyl-CoA; essentially the oxidative TCA cycle running in reverse. Acetyl-CoA is reductively carboxylated to pyruvate, from which all other central metabolites can be formed. Most of the enzymes of reductive and oxidative TCA cycle are shared, with the exception of three key enzymes that allow the cycle to run in reverse: ATP citrate lyase, 2-oxoglutarate:ferredoxin oxidoreductase, and fumarate reductase. 2-oxoglutarate:ferredoxin oxidoreductase catalyzes the carboxylation of succinyl-CoA to 2-oxoglutarate, ATP citrate lyase the ATP-dependent cleavage of citrate to acetyl-CoA and oxaloacetate, and fumarate reductase the reduction of fumarate forming succinate.","definition_xrefs":["GOC:jl","PMID:15838028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon fixation","termid":"GO:0015977"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reductive tricarboxylic acid cycle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019644"],"synonyms":[{"name":"reductive Kreb's cycle","type":"exact"},{"name":"reductive TCA cycle","type":"exact"},{"name":"reductive carboxylate cycle","type":"exact"},{"name":"reductive carboxylic acid cycle","type":"exact"},{"name":"reductive citric acid pathway","type":"exact"}],"termid":"GO:0019643","terms_by_termid":{"GO:0019643":null}}


id: PBO:0042519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2","termid":"PBO:0042519"}


id: MONDO:0019284
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007900"}]},"cv_name":"mondo","definition":"A nail anomaly that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nail disorder","termid":"MONDO:0002884"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"is_obsolete":false,"name":"inherited isolated nail anomaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080683","GARD:19000","UMLS:C5681477","Orphanet:79369","MEDGEN:1843192","OMIMPS:161050"],"synonyms":[{"name":"isolated nail anomaly","type":"related"},{"name":"nail disorder, nonsyndromic congenital","type":"exact"},{"name":"nonsyndromic nail anomaly","type":"exact"}],"termid":"MONDO:0019284","terms_by_termid":{"MONDO:0007900":null},"xrefs":{"Monarch":{"xref_id":"0019284"}}}


id: PBO:0084726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein; role in mitophagy is disputed; implicated in cell wall biogenesis, the oxidative stress response, life span during starvation, and cell death; SUN family member; UTH1 has a paralog, NCA3, that arose from the whole genome duplication","termid":"PBO:0084726"}


id: PBO:0066506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFX3 divergent transcript","termid":"PBO:0066506"}


id: PBO:0074334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAL1 antisense RNA 1","termid":"PBO:0074334"}


id: GO:0051389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase kinase (MAPKK).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPKK activity (obsolete GO:0051389)","synonyms":[{"name":"inactivation of MAP kinase kinase activity","type":"exact"},{"name":"termination of MAP kinase kinase activity","type":"exact"},{"name":"termination of MAPKK activity","type":"exact"}],"termid":"GO:0051389"}


id: MONDO:1010831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetradysmelia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetradysmelia, non-human animal","termid":"MONDO:1010163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetradysmelia, cattle","secondary_identifiers":["OMIA:002297-9913"],"termid":"MONDO:1010831","xrefs":{"Monarch":{"xref_id":"1010831"}}}


id: GO:0120277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cerebral blood circulation.","definition_xrefs":["PMID:25397684","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cerebral blood circulation","termid":"GO:0120276"},{"relation_name":"is_a","term_name":"positive regulation of blood circulation","termid":"GO:1903524"},{"relation_name":"positively_regulates","term_name":"cerebral blood circulation","termid":"GO:0120275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cerebral blood circulation","synonyms":[{"name":"activation of cerebral blood circulation","type":"narrow"},{"name":"positive regulation of cerebrum blood circulation","type":"exact"},{"name":"positive regulation of telencephalon blood circulation","type":"exact"},{"name":"up regulation of cerebral blood circulation","type":"exact"},{"name":"up-regulation of cerebral blood circulation","type":"exact"},{"name":"upregulation of cerebral blood circulation","type":"exact"}],"termid":"GO:0120277"}


id: GO:0141090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein phospho-serine + inositol 5-triphosphate pentakisphosphate = protein diphospho-serine + inositol 5-diphosphate pentakisphosphate.","definition_xrefs":["RHEA:64104","PMID:36603579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein serine pyrophosphorylase activity","synonyms":[{"name":"protein serine pyrophosphatase activity","type":"related"}],"termid":"GO:0141090"}


id: GO:0009742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of brassinosteroid.","definition_xrefs":["GOC:sm","PMID:16699538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"steroid hormone receptor signaling pathway","termid":"GO:0043401"},{"relation_name":"part_of","term_name":"cellular response to brassinosteroid stimulus","termid":"GO:0071367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"brassinosteroid mediated signaling pathway","synonyms":[{"name":"brassinosteroid mediated signalling","type":"exact"}],"termid":"GO:0009742"}


id: PBO:0087489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of CPF cleavage and polyadenylation factor and E3 Ub-ligase; involved in 3' end formation of mRNA via cleavage and polyadenylation of pre-mRNA; binds pre-mRNA via the zinc knuckle and RING finger; E3 ubiquitin ligase involved in polyubiquitination of the endonuclease Ysh1p; contains a ubiquitin-like (UBL) domain, a RNA-binding zinc knuckle motif and a RING finger domain; possible role in ubiquitination of Pap1p; relocalizes to the cytosol in response to hypoxia; homolog of human RBBP6","termid":"PBO:0087489"}


id: SO:0000590
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The signal recognition particle (SRP) is a universally conserved ribonucleoprotein. It is involved in the co-translational targeting of proteins to membranes. The eukaryotic SRP consists of a 300-nucleotide 7S RNA and six proteins: SRPs 72, 68, 54, 19, 14, and 9. Archaeal SRP consists of a 7S RNA and homologues of the eukaryotic SRP19 and SRP54 proteins. In most eubacteria, the SRP consists of a 4.5S RNA and the Ffh protein (a homologue of the eukaryotic SRP54 protein). Eukaryotic and archaeal 7S RNAs have very similar secondary structures, with eight helical elements. These fold into the Alu and S domains, separated by a long linker region. Eubacterial SRP is generally a simpler structure, with the M domain of Ffh bound to a region of the 4.5S RNA that corresponds to helix 8 of the eukaryotic and archaeal SRP S domain. Some Gram-positive bacteria (e.g. Bacillus subtilis), however, have a larger SRP RNA that also has an Alu domain. The Alu domain is thought to mediate the peptide chain elongation retardation function of the SRP. The universally conserved helix which interacts with the SRP54/Ffh M domain mediates signal sequence recognition. In eukaryotes and archaea, the SRP19-helix 6 complex is thought to be involved in SRP assembly and stabilizes helix 8 for SRP54 binding.","direct_ancestors":[{"relation_name":"derives_from","term_name":"SRP_RNA_primary_transcript","termid":"SO:0000589"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP_RNA","synonyms":[{"name":"7S RNA","type":"related"},{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:SRP_RNA","type":"exact"},{"name":"SRP RNA","type":"exact"},{"name":"signal recognition particle RNA","type":"related"}],"termid":"SO:0000590"}


id: PBO:0111740
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family helicase","termid":"PBO:0111740"}


id: GO:0015083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of aluminum (Al) ions from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic molecular entity transmembrane transporter activity","termid":"GO:0015318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"aluminum ion transmembrane transporter activity","secondary_identifiers":["GO:0015084"],"synonyms":[{"name":"aluminium ion transporter activity","type":"exact"},{"name":"aluminium resistance permease activity","type":"exact"},{"name":"aluminum resistance permease activity","type":"exact"}],"termid":"GO:0015083"}


id: PR:000037296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase cds1 in Schizosaccharomyces pombe that has been phosphorylated on the Thr residue in the second TQ motif by rad3. Example: UniProtKB:Q09170, Thr-11, MOD:00047.","definition_xrefs":["PMID:15173168","PomBase:AL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","termid":"PR:000030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cds1/Phos:(T11)","pombase_gene_id":"SPCC18B5.11c","synonyms":[{"name":"PomBase_original_PRO_term_name: serine/threonine-protein kinase cds1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-CHEK2/Phos:1","type":"exact"},{"name":"cds1/Phos:(T11)","type":"exact"}],"termid":"PR:000037296"}


id: PBO:0067937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 239","termid":"PBO:0067937"}


id: PATO:0001794
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being wound in a continuous series of loops.","definition_xrefs":["Online_Dictionary:Online_Dictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiling","termid":"PATO:0001794"}


id: FYPO:0003626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the tip of a shmoo, or mating projection, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to shmoo tip","synonyms":[{"name":"normal protein localisation to shmoo tip","type":"exact"},{"name":"normal protein localization to mating projection tip","type":"exact"},{"name":"normal protein localization to shmoo projection","type":"exact"}],"termid":"FYPO:0003626"}


id: GO:0032675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-6 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-6 production","termid":"GO:0032635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-6 production","secondary_identifiers":["GO:0045408"],"synonyms":[{"name":"regulation of IL-6 production","type":"exact"},{"name":"regulation of interleukin-6 biosynthetic process","type":"narrow"}],"termid":"GO:0032675"}


id: MONDO:0001961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glossopharyngeal neuralgia (obsolete MONDO:0001961)","termid":"MONDO:0001961","xrefs":{"Monarch":{"xref_id":"0001961"}}}


id: GO:0051119
data:
  {"annotated_genes":["SJAG_00057","SJAG_02719","SJAG_03608","SJAG_03820"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055056"},{"annotations":[111022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005354"},{"annotations":[103327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015149"},{"annotations":[114563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140108"},{"annotations":[117604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a sugar from one side of a membrane to the other. A sugar is any member of a class of sweet, water-soluble, crystallizable carbohydrates, which are the monosaccharides and smaller oligosaccharides.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_02719":null,"SJAG_03608":null,"SJAG_03820":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sugar transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8876319","Reactome:R-HSA-428779","Reactome:R-HSA-8875902"],"synonyms":[{"name":"sugar/polyol channel activity","type":"narrow"}],"termid":"GO:0051119","terms_by_termid":{"GO:0005354":null,"GO:0005358":null,"GO:0015149":null,"GO:0055056":null,"GO:0140108":null}}


id: PBO:0068819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 57, pseudogene","termid":"PBO:0068819"}


id: GO:0042694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a muscle cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:go_curators","CL:0000187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"muscle cell fate commitment","termid":"GO:0042693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell fate specification","termid":"GO:0042694"}


id: PBO:0047504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fer-1 like family member 5","termid":"PBO:0047504"}


id: PR:000027731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin type-2 heavy chain 1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:15184401","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin type-2 heavy chain 1","termid":"PR:000027728"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo2/UnMod","pombase_gene_id":"SPCC645.05c","synonyms":[{"name":"PomBase_original_PRO_term_name: myosin type-2 heavy chain 1 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-myo2/UnMod","type":"exact"},{"name":"myo2/UnMod","type":"exact"}],"termid":"PR:000027731"}


id: MONDO:0003704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An unusual condition characterized by the presence of numerous small benign smooth muscle neoplasms located throughout the body of the uterus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyomatosis","termid":"MONDO:0003295"},{"relation_name":"is_a","term_name":"uterine corpus leiomyoma","termid":"MONDO:0007886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus diffuse leiomyomatosis","secondary_identifiers":["DOID:5917","UMLS:C1519855","DOID:5916","NCIT:C40170","MEDGEN:275556"],"synonyms":[{"name":"body of uterus leiomyomatosis","type":"exact"},{"name":"leiomyomatosis of body of uterus","type":"exact"},{"name":"uterine corpus diffuse leiomyomatosis","type":"exact"},{"name":"uterine corpus leiomyomatosis","type":"exact"}],"termid":"MONDO:0003704","xrefs":{"Monarch":{"xref_id":"0003704"}}}


id: PBO:0056308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 4","termid":"PBO:0056308"}


id: PR:Q09127
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1001 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L10-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.04","synonyms":[{"name":"QM protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SpQM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl1001","type":"exact"}],"termid":"PR:Q09127"}


id: PBO:0063367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCSK6 antisense RNA 1","termid":"PBO:0063367"}


id: MONDO:0005761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parasitic infestation of the human lymphatic system by wuchereria bancrofti or brugia malayi. It is also called lymphatic filariasis.","definition_xrefs":["MESH:D004605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic eyelid infestation","termid":"MONDO:0001812"},{"relation_name":"is_a","term_name":"elephantiasis","termid":"MONDO:0005424"},{"relation_name":"is_a","term_name":"filariasis","termid":"MONDO:0016075"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005328"],"is_obsolete":false,"name":"filarial elephantiasis","secondary_identifiers":["MedDRA:10016675","SCTID:14100003","SCTID:240820001","Orphanet:2035","GARD:3321","EFO:0007272","ICD9:374.83","MEDGEN:8583","NCIT:C128360","DOID:12211","icd11.foundation:247221550","UMLS:C0013884"],"synonyms":[{"name":"Bancroftian elephantiasis","type":"exact"},{"name":"Bancroftian filarial chyluria","type":"exact"},{"name":"Bancroftian filariasis","type":"related"},{"name":"Elephantiasis","type":"broad"},{"name":"Malayi tropical eosinphilia","type":"related"},{"name":"Wuchereria Bancrofti infection","type":"related"},{"name":"Wuchereriasis","type":"related"},{"name":"elephantiasis","type":"broad"},{"name":"elephantiasis of eyelid","type":"exact"},{"name":"eyelid elephantiasis","type":"exact"}],"termid":"MONDO:0005761","xrefs":{"Monarch":{"xref_id":"0005761"}}}


id: GO:0072161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesenchymal cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"is_a","term_name":"mesenchymal cell differentiation involved in renal system development","termid":"GO:2001012"},{"relation_name":"part_of","term_name":"kidney mesenchyme development","termid":"GO:0072074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in kidney development","termid":"GO:0072161"}


id: MONDO:0033682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"immuno-osseous dysplasia","termid":"MONDO:0015708"},{"relation_name":"is_a","term_name":"spondylodysplastic dysplasia","termid":"MONDO:0019694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"skeletal dysplasia-T-cell immunodeficiency-developmental delay syndrome","secondary_identifiers":["UMLS:C5567899","GARD:22070","MEDGEN:1799322","Orphanet:508533"],"termid":"MONDO:0033682","xrefs":{"Monarch":{"xref_id":"0033682"}}}


id: GO:1902817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to microtubule.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to microtubule","termid":"GO:1902816"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to microtubule","termid":"GO:0035372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to microtubule","synonyms":[{"name":"down regulation of protein localisation to microtubule","type":"exact"},{"name":"down regulation of protein localization to microtubule","type":"exact"},{"name":"down-regulation of protein localisation to microtubule","type":"exact"},{"name":"down-regulation of protein localization to microtubule","type":"exact"},{"name":"downregulation of protein localisation to microtubule","type":"exact"},{"name":"downregulation of protein localization to microtubule","type":"exact"},{"name":"inhibition of protein localisation to microtubule","type":"narrow"},{"name":"inhibition of protein localization to microtubule","type":"narrow"},{"name":"negative regulation of protein localisation to microtubule","type":"exact"}],"termid":"GO:1902817"}


id: MONDO:0016995
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial multiple meningioma is a rare, benign neoplasm of the central nervous system characterized by the development of multiple or, rarely, solitary meningiomas in two or more blood relatives, without other apparent syndromic manifestations. Depending on the localization, growth rate and size of the tumors, patients can present with subtle, gradually worsening or abrupt and severe neurological compromise or can be completely asymptomatic.","definition_xrefs":["Orphanet:263662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor of meninges","termid":"MONDO:0016743"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial multiple meningioma","secondary_identifiers":["UMLS:C4707361","icd11.foundation:160795085","GARD:17260","MEDGEN:1644853"],"termid":"MONDO:0016995","xrefs":{"Monarch":{"xref_id":"0016995"}}}


id: MONDO:0013379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Noonan syndrome in which the cause of the disease is a mutation in the BRAF gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome","termid":"MONDO:0018997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome 7","secondary_identifiers":["OMIM:613706","MEDGEN:462320","DOID:0060585","NCIT:C176935","GARD:15693","UMLS:C3150970"],"synonyms":[{"name":"BRAF Noonan syndrome","type":"exact"},{"name":"NS7","type":"exact"},{"name":"Noonan syndrome 7","type":"exact"},{"name":"Noonan syndrome caused by mutation in BRAF","type":"exact"},{"name":"Noonan syndrome type 7","type":"exact"}],"termid":"MONDO:0013379","xrefs":{"Monarch":{"xref_id":"0013379"}}}


id: PBO:0074657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 47","termid":"PBO:0074657"}


id: GO:0050612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: A + arsenite + H2O = AH(2) + arsenate + 2 H+.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete arsenate reductase (donor) activity (obsolete GO:0050612)","termid":"GO:0050612"}


id: GO:0009315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete drug resistance (obsolete GO:0009315)","synonyms":[{"name":"drug resistance","type":"exact"}],"termid":"GO:0009315"}


id: GO:0008462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins to small peptides in the presence of ATP and magnesium. Alpha-casein is the usual test substrate. In the absence of ATP, only oligopeptides shorter than five residues are cleaved, for example, succinyl-Leu-Tyr-NHMec which is cleaved at the Tyr-NHMec bond, and Leu-Tyr-Leu-Tyr-Trp which is cleaved at the second Leu-Typ bond (cleavage of the Tyr-Leu and Tyr-Trp bonds also occurs).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endopeptidase Clp activity (obsolete GO:0008462)","synonyms":[{"name":"ATP-dependent Clp protease","type":"narrow"},{"name":"Clp protease","type":"narrow"},{"name":"ClpP","type":"related"},{"name":"caseinolytic protease activity","type":"related"},{"name":"endopeptidase Clp activity","type":"exact"},{"name":"endopeptidase Ti activity","type":"related"},{"name":"protease Ti activity","type":"related"}],"termid":"GO:0008462"}


id: MONDO:0006849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of breast tissue during lactation or postpartum due to an obstructed duct or infection. Mastitis can also occur in non-breastfeeding women, and rarely in men.","definition_xrefs":["NCIT:P378","Wikipedia:Mastitis#Types"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mastitis","secondary_identifiers":["MESH:D008413","MEDGEN:9901","UMLS:C0024894","EFO:1001034","SCTID:45198002","MedDRA:10026883","DOID:10690","NCIT:C53662"],"synonyms":[{"name":"breast infection","type":"exact"},{"name":"breast inflammation","type":"exact"},{"name":"inflammation of breast","type":"exact"},{"name":"inflammatory breast disease","type":"exact"},{"name":"inflammatory disease of breast","type":"exact"}],"termid":"MONDO:0006849","xrefs":{"Monarch":{"xref_id":"0006849"}}}


id: GO:0030833
data:
  {"annotated_genes":["SJAG_04479","SJAG_00279","SJAG_03086","SJAG_02566","SJAG_01993","SJAG_00521","SJAG_01894","SJAG_02700","SJAG_04100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67344,68476,76966,77630,79762],"is_not":false,"summary":null,"term":"GO:0030833"},{"annotations":[76055,92654,80536,79503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin polymerization or depolymerization","termid":"GO:0008064"},{"relation_name":"is_a","term_name":"regulation of protein polymerization","termid":"GO:0032271"},{"relation_name":"regulates","term_name":"actin filament polymerization","termid":"GO:0030041"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of actin filament polymerization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of actin polymerization","type":"exact"}],"termid":"GO:0030833","terms_by_termid":{"GO:0030833":null,"GO:0051016":null}}


id: GO:0101026
data:
  {"annotated_genes":["SJAG_04509","SJAG_04972","SJAG_03313","SJAG_04319","SJAG_04883","SJAG_03219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88212,93386,98017,98684,110282,110694],"is_not":false,"summary":null,"term":"GO:0101026"}]},"cv_name":"biological_process","definition":"A process in which the nuclear inner or outer membrane is synthesized, aggregates, and bonds together during mitotic nuclear division.","definition_xrefs":["GOC:vw","PMID:26869222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"is_a","term_name":"nuclear membrane biogenesis","termid":"GO:0101025"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":6,"genes_by_uniquename":{"SJAG_03219":null,"SJAG_03313":null,"SJAG_04319":null,"SJAG_04509":null,"SJAG_04883":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0007049","GO:0061024","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"mitotic nuclear membrane biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear membrane biogenesis involved in mitotic nuclear division","type":"exact"}],"termid":"GO:0101026","terms_by_termid":{"GO:0101026":null}}


id: PBO:0056631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 11","termid":"PBO:0056631"}


id: GO:0072396
data:
  {"annotated_genes":["SJAG_03048","SJAG_04140","SJAG_01805","SJAG_00082","SJAG_04183","SJAG_04332","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90324,94135,102722,111578,117068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[104500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[102733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[102734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[94879,102735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of cell cycle checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"},{"relation_name":"is_a","term_name":"cellular response to endogenous stimulus","termid":"GO:0071495"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cell cycle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072408","GO:0072405"],"synonyms":[{"name":"G1/S transition checkpoint effector process","type":"related"},{"name":"G2/M transition checkpoint effector process","type":"related"},{"name":"cell cycle checkpoint effector process","type":"exact"},{"name":"response to G1/S transition checkpoint signaling","type":"related"},{"name":"response to G2/M transition checkpoint signaling","type":"related"},{"name":"response to signal involved in G1/S transition checkpoint","type":"related"},{"name":"response to signal involved in G2/M transition checkpoint","type":"related"},{"name":"response to signal involved in cell cycle checkpoint","type":"exact"}],"termid":"GO:0072396","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0140429":null,"GO:1990820":null}}


id: PBO:0073934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC17A6 divergent transcript","termid":"PBO:0073934"}


id: PBO:0036217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_acetylation_during_vegetative_growth","termid":"PBO:0036217"}


id: PR:000050464
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division control protein 12 (Schizosaccharomyces pombe) that has not been phosphorylated on residues equivalent to Thr-20, Thr-22, Ser-64, Thr-95, Thr-151 and Ser-463 of the amino acid sequence represented by UniProtKB:Q10059. Example: UniProtKB:Q10059, Thr-20/Thr-22/Ser-64/Thr-95/Thr-151/Ser-463, PR:000026291.","definition_xrefs":["PMID:29343550","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division control protein 12 (Schizosaccharomyces pombe)","termid":"PR:000044734"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc12/UnPhos(T20,T21,S64,T95,T151,S463)","pombase_gene_id":"SPAC1F5.04c","synonyms":[{"name":"PomBase_original_PRO_term_name: cell division control protein 12 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc12/UnPhos:1","type":"exact"},{"name":"UniProtKB:Q10059, Thr-20/Thr-22/Ser-64/Thr-95/Thr-151/Ser-463, PR:000026291","type":"narrow"},{"name":"cdc12/UnPhos(T20,T21,S64,T95,T151,S463)","type":"exact"}],"termid":"PR:000050464"}


id: MONDO:0012450
data:
  {"annotated_genes":["SJAG_01179"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85519],"is_not":false,"summary":null,"term":"MONDO:0012450"}]},"cv_name":"mondo","definition":"Spinocerebellar ataxia type 28 (SCA28) is a very rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by juvenile onset, slowly progressive cerebellar ataxia due to Purkinje cell degeneration.","definition_xrefs":["Orphanet:101109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0002039","MONDO:0004069","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia type 28","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C537205","icd11.foundation:2020736035","SCTID:715824008","MEDGEN:339941","GARD:9951","OMIM:610246","DOID:0050977","UMLS:C1853249"],"synonyms":[{"name":"SCA28","type":"exact"},{"name":"spinocerebellar ataxia 28","type":"related"},{"name":"spinocerebellar ataxia type 28","type":"exact"}],"termid":"MONDO:0012450","terms_by_termid":{"MONDO:0012450":null},"xrefs":{"Monarch":{"xref_id":"0012450"}}}


id: PBO:0059917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 3","termid":"PBO:0059917"}


id: MONDO:0800403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited retinopathy caused by bi-allelic variants in the CNGB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"CNGB1-related retinopathy","termid":"MONDO:0800403","xrefs":{"Monarch":{"xref_id":"0800403"}}}


id: GO:0034918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-hydroxy-2-methylhexanoyl-CoA = 2-methyl-3-oxohexanoyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-2-methylhexanoyl-CoA dehydrogenase activity (obsolete GO:0034918)","termid":"GO:0034918"}


id: PBO:0046628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 9","termid":"PBO:0046628"}


id: GO:0008595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the anterior/posterior axis of the embryo by the products of genes expressed maternally and genes expressed in the zygote.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic axis specification","termid":"GO:0000578"},{"relation_name":"is_a","term_name":"anterior/posterior axis specification","termid":"GO:0009948"},{"relation_name":"part_of","term_name":"tripartite regional subdivision","termid":"GO:0007351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior axis specification, embryo","synonyms":[{"name":"anterior/posterior axis determination, embryo","type":"related"}],"termid":"GO:0008595"}


id: GO:0044689
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil + S-adenosyl-L-methionine = 5'-deoxyadenosine + 7,8-didemethyl-8-hydroxy-5-deazariboflavin + H+ + L-methionine + NH4+.","definition_xrefs":["RHEA:55204","PMID:14593448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity","secondary_identifiers":["EC:4.3.1.32","MetaCyc:RXN-19230"],"synonyms":[{"name":"FO synthase","type":"exact"}],"termid":"GO:0044689"}


id: PBO:0090571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane ATPase Msp1/Yta4","termid":"PBO:0090571"}


id: GO:0018155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-protein cross-link between peptidyl-serine and peptidyl-cysteine by the synthesis of sn-(2S,6R)-lanthionine (meso-lanthione).","definition_xrefs":["RESID:AA0111"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via sn-(2S,6R)-lanthionine (obsolete GO:0018155)","termid":"GO:0018155"}


id: GO:0048653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anther over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"stamen development","termid":"GO:0048443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther development","termid":"GO:0048653"}


id: PBO:0026769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cell_surface","termid":"PBO:0026769"}


id: PBO:0082810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved casein kinase, monopolin subunit; regulates diverse events including vesicular traffic, DNA repair, CVT pathway, cohesion cleavage, attachment of sister kinetochores at meiosis I, exit from meiosis II, and ribosomal subunit biogenesis; binds the RNAPII CTD; phosphorylates COPII coat subunits; interacts with Sit4p phosphatase; antagonizes calcineurin signaling, reducing nuclear accumulation of Crz1p; phosphorylates Dsn1p; homolog of mammalian CK1delta","termid":"PBO:0082810"}


id: MONDO:0016784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gestational trophoblastic disease (obsolete MONDO:0016784)","secondary_identifiers":["ICD9:631","MESH:D031901","ONCOTREE:GTD","Orphanet:254685","SCTID:416402001"],"termid":"MONDO:0016784","xrefs":{"Monarch":{"xref_id":"0016784"}}}


id: MONDO:0012336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the CRYBB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 22 multiple types","secondary_identifiers":["MEDGEN:341862","DOID:0110268","MESH:C565725","UMLS:C1857853","OMIM:609741"],"synonyms":[{"name":"CATCN2","type":"narrow"},{"name":"CRYBB3 early-onset non-syndromic cataract","type":"exact"},{"name":"CTRCT22","type":"exact"},{"name":"autosomal recessive congenital nuclear cataract 2","type":"narrow"},{"name":"cataract 22","type":"exact"},{"name":"cataract 22, multiple types","type":"related"},{"name":"cataract, congenital nuclear, autosomal recessive 2","type":"related"},{"name":"early-onset non-syndromic cataract caused by mutation in CRYBB3","type":"exact"}],"termid":"MONDO:0012336","xrefs":{"Monarch":{"xref_id":"0012336"}}}


id: PBO:0038890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin 3","termid":"PBO:0038890"}


id: PBO:0090415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbl8","termid":"PBO:0090415"}


id: PBO:0088985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF Vps domain, PX domain","termid":"PBO:0088985"}


id: PBO:0060780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B9 pseudogene 2","termid":"PBO:0060780"}


id: PBO:0071644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 8","termid":"PBO:0071644"}


id: PBO:0083441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified and essential ORF SPT6/YGR115C","termid":"PBO:0083441"}


id: FYPO:0008335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the poly(A) tails of mRNA molecules occurs to a higher extent than normal.","definition_xrefs":["PMID:39333464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA modification","termid":"FYPO:0000374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"increased mRNA poly(A) tail uridylation","termid":"FYPO:0008335"}


id: PBO:0068220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 527","termid":"PBO:0068220"}


id: FYPO:0001742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which isochromosome formation occurs more frequently than in wild type cells. In isochromosome formation, one chromosome arm is lost and the other arm is duplicated in its place.","definition_xrefs":["PMID:18923422","PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased gross chromosomal rearrangement","termid":"FYPO:0001740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"increased isochromosome formation","synonyms":[{"name":"increased occurrence of isochromosome formation","type":"exact"}],"termid":"FYPO:0001742"}


id: PBO:0044413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily R member 1","termid":"PBO:0044413"}


id: MONDO:0000733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare developmental defect of the eye characterized by usually bilateral absence of the normal protrusion of the cornea from the sclera, the corneal curvature being the same as that of the adjacent sclera. Most patients develop hyperopia, hazy corneal limbus, and arcus lipoides at an early age. The condition may present as an autosomal dominant or an autosomal recessive form, with the latter showing more severe signs and symptoms (such as a round and opaque thickening located centrally in the cornea) and more frequent association with other ocular anomalies.","definition_xrefs":["Orphanet:53691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cornea plana","secondary_identifiers":["GARD:16657","ICD10CM:Q13.4","UMLS:C0344529","HP:0007720","OMIMPS:121400","SCTID:204145006","DOID:0060287","MEDGEN:576329","icd11.foundation:262157734"],"synonyms":[{"name":"congenital cornea plana","type":"exact"},{"name":"flat cornea","type":"exact"}],"termid":"MONDO:0000733","xrefs":{"Monarch":{"xref_id":"0000733"}}}


id: PBO:0044478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 21 subfamily A member 1, pseudogene","termid":"PBO:0044478"}


id: MONDO:0005916
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The clinical condition in which any part of the placenta invades and is inseparable from the uterine wall. (reVITALize)","definition_xrefs":["NCIT:C26856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"placenta disorder","termid":"MONDO:0005917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta accreta","secondary_identifiers":["MESH:D010921","SCTID:70129008","UMLS:C0032044","icd11.foundation:298160226","DOID:4744","MEDGEN:10780","Orphanet:662721","EFO:0007440"],"synonyms":[{"name":"Increta, placenta","type":"related"},{"name":"Percreta, placenta","type":"related"},{"name":"accreta, placenta","type":"related"},{"name":"placenta Increta","type":"related"},{"name":"placenta Percreta","type":"related"}],"termid":"MONDO:0005916","xrefs":{"Monarch":{"xref_id":"0005916"}}}


id: PBO:0076278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex protein 2","termid":"PBO:0076278"}


id: GO:0080116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of glucuronate to the xylan backbone of glucuronoxylan molecule.","definition_xrefs":["PMID:18980649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glucuronoxylan glucuronosyltransferase activity","termid":"GO:0080116"}


id: PBO:0091879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER sterol deacetylase Say1","termid":"PBO:0091879"}


id: PBO:0043189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4","termid":"PBO:0043189"}


id: MONDO:0003547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete histiocytic and dendritic cell cancer (obsolete MONDO:0003547)","secondary_identifiers":["NCIT:C9294"],"termid":"MONDO:0003547","xrefs":{"Monarch":{"xref_id":"0003547"}}}


id: MONDO:0976129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 26","secondary_identifiers":["OMIM:621065"],"termid":"MONDO:0976129","xrefs":{"Monarch":{"xref_id":"0976129"}}}


id: SO:0001969
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant occurring within an intron of a coding transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_variant","termid":"SO:0001627"},{"relation_name":"is_a","term_name":"coding_transcript_variant","termid":"SO:0001968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_transcript_intron_variant","synonyms":[{"name":"Jannovar:coding_transcript_intron_variant","type":"exact"},{"name":"coding sequence intron variant","type":"exact"}],"termid":"SO:0001969"}


id: MONDO:0013612
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any geleophysic dysplasia in which the cause of the disease is a mutation in the FBN1 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"geleophysic dysplasia","termid":"MONDO:0000127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geleophysic dysplasia 2","secondary_identifiers":["UMLS:C3280054","DOID:0111726","GARD:15768","MEDGEN:481684","OMIM:614185"],"synonyms":[{"name":"FBN1 geleophysic dysplasia","type":"exact"},{"name":"GELEOPHYSIC dysplasia 2","type":"related"},{"name":"GPHYSD2","type":"related"},{"name":"Geleophysic dysplasia 2","type":"exact"},{"name":"Geleophysic dysplasia type 2","type":"exact"},{"name":"geleophysic dysplasia caused by mutation in FBN1","type":"exact"}],"termid":"MONDO:0013612","xrefs":{"Monarch":{"xref_id":"0013612"}}}


id: GO:0035310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell in the larval wing imaginal disc becomes capable of differentiating autonomously into a notum cell, if left in its normal environment.","definition_xrefs":["PMID:10860999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification involved in pattern specification","termid":"GO:0060573"},{"relation_name":"part_of","term_name":"wing and notum subfield formation","termid":"GO:0035309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"notum cell fate specification","termid":"GO:0035310"}


id: GO:0045906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of vasoconstriction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction","termid":"GO:0019229"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"vasoconstriction","termid":"GO:0042310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vasoconstriction","synonyms":[{"name":"down regulation of vasoconstriction","type":"exact"},{"name":"down-regulation of vasoconstriction","type":"exact"},{"name":"downregulation of vasoconstriction","type":"exact"},{"name":"inhibition of vasoconstriction","type":"narrow"}],"termid":"GO:0045906"}


id: MONDO:0032826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 21","secondary_identifiers":["UMLS:C5231498","DOID:0112267","OMIM:618594","MEDGEN:1684676"],"synonyms":[{"name":"NEPHROTIC SYNDROME, TYPE 21","type":"related"},{"name":"NPHS21","type":"related"}],"termid":"MONDO:0032826","xrefs":{"Monarch":{"xref_id":"0032826"}}}


id: GO:0103014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ethyl-(2R)-methyl-(3S)-hydroxybutanoate + NADP = ethyl-2-methylacetoacetate + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-keto ester reductase activity (obsolete GO:0103014)","termid":"GO:0103014"}


id: PBO:0089788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis WD repeat WDR12/Ytm1 protein","termid":"PBO:0089788"}


id: FYPO:0005352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the physical attachment of sister chromatids to mitotic spindle microtubules is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal attachment of spindle microtubules to kinetochore","termid":"FYPO:0003570"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal attachment of mitotic spindle microtubules to kinetochore","synonyms":[{"name":"abnormal attachment of spindle microtubules to kinetochore mitosis","type":"exact"},{"name":"normal attachment of mitotic spindle microtubules to kinetochore during vegetative growth","type":"exact"},{"name":"normal attachment of spindle microtubules to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005352"}


id: PBO:0084678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial assembly factor; important for assembly of the mitochondrial respiratory chain bc1 complex (complex III), cytochrome oxidase (complex IV), and the complex III-complex IV supercomplex; embedded in the mitochondrial inner membrane, facing the intermembrane space","termid":"PBO:0084678"}


id: PBO:0109625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 79 (pseudogene)","termid":"PBO:0109625"}


id: MONDO:0100258
data:
  {"annotated_genes":["SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009958"}]},"cv_name":"mondo","definition":"Any disorder of peroxisomal alpha oxidation in which the cause of the disease is a mutation in the PHYH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of peroxisomal alpha oxidation","termid":"MONDO:0100277"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"phytanoyl-CoA hydroxylase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PHYH deficiency","type":"exact"},{"name":"PHYH related disorder of peroxisomal alpha oxidation","type":"exact"},{"name":"phytanoyl-CoA hydroxylase deficiency","type":"exact"}],"termid":"MONDO:0100258","terms_by_termid":{"MONDO:0009958":null},"xrefs":{"Monarch":{"xref_id":"0100258"}}}


id: MONDO:0001477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aniridia (obsolete MONDO:0001477)","termid":"MONDO:0001477","xrefs":{"Monarch":{"xref_id":"0001477"}}}


id: GO:0070085
data:
  {"annotated_genes":["SJAG_03774","SJAG_04954","SJAG_04231","SJAG_02056","SJAG_03032","SJAG_01021","SJAG_00831","SJAG_02163","SJAG_04316","SJAG_00437","SJAG_03555","SJAG_04906","SJAG_02519","SJAG_00183","SJAG_01972","SJAG_01491","SJAG_04363","SJAG_04571","SJAG_00394","SJAG_04952","SJAG_03188","SJAG_01006","SJAG_00554","SJAG_02783","SJAG_03150","SJAG_02996","SJAG_03676","SJAG_05219","SJAG_04053","SJAG_02648","SJAG_03764","SJAG_01276","SJAG_05348","SJAG_04095","SJAG_03871","SJAG_03656","SJAG_00334","SJAG_03082","SJAG_04770","SJAG_04090","SJAG_00924","SJAG_01950","SJAG_04127","SJAG_03790","SJAG_00816","SJAG_04821","SJAG_04401","SJAG_01069","SJAG_03056","SJAG_03311","SJAG_03149","SJAG_01595","SJAG_03330","SJAG_02102","SJAG_00747","SJAG_03333","SJAG_01264","SJAG_04728","SJAG_01389","SJAG_02903","SJAG_00598"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64611,63620,65844,75335,73453,94228,80347,91454,100120,77563,105361,100330,61722,69461,77072,111464],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[58748,72330,100368,114341,63692,67079,96040,108757,118218,75823,74830,63329,68976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006486"},{"annotations":[111086,75711,70338,74922,79481,77963,79685,75150,74011,78673,76029,78371,80258,77419,111080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006487"},{"annotations":[99111,98217,74650,87827,99109,79525,79900,79086,76572,100668,105307,118452,99112,99110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018279"},{"annotations":[75151,79686,118453,63048,77964,111081,111087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006493"},{"annotations":[101883,93365,106327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"The covalent attachment and further modification of carbohydrate residues to a substrate molecule.","definition_xrefs":["GOC:hjd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00924":null,"SJAG_01006":null,"SJAG_01021":null,"SJAG_01069":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01389":null,"SJAG_01491":null,"SJAG_01595":null,"SJAG_01950":null,"SJAG_01972":null,"SJAG_02056":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02519":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02903":null,"SJAG_02996":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03188":null,"SJAG_03311":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03555":null,"SJAG_03656":null,"SJAG_03676":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04053":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04127":null,"SJAG_04231":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04401":null,"SJAG_04571":null,"SJAG_04728":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null,"SJAG_05348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosylation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Glycosylation"],"termid":"GO:0070085","terms_by_termid":{"GO:0006486":null,"GO:0006487":null,"GO:0006488":null,"GO:0006493":null,"GO:0018279":null,"GO:0035269":null}}


id: GO:0031661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity contributing to the G2/M transition of the cell cycle.","definition_xrefs":["GOC:mah","GOC:pr","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle (obsolete GO:0031661)","synonyms":[{"name":"G2/M-specific down regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G2/M-specific down-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G2/M-specific downregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G2/M-specific inhibition of cyclin-dependent protein kinase activity","type":"narrow"},{"name":"G2/M-specific negative regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"negative regulation of cyclin-dependent protein kinase activity during G2/M","type":"related"},{"name":"negative regulation of cyclin-dependent protein kinase activity involved in G2/M","type":"broad"}],"termid":"GO:0031661"}


id: GO:0061179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the regulated release of insulin that contributes to the response of a cell to glucose.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of insulin secretion","termid":"GO:0046676"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of insulin secretion involved in cellular response to glucose stimulus","termid":"GO:0061178"},{"relation_name":"negatively_regulates","term_name":"insulin secretion involved in cellular response to glucose stimulus","termid":"GO:0035773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of insulin secretion involved in cellular response to glucose stimulus","synonyms":[{"name":"negative regulation of insulin secretion in response to glucose","type":"related"},{"name":"negative regulation of insulin secretion involved in cellular response to glucose","type":"exact"}],"termid":"GO:0061179"}


id: PBO:0055940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 47","termid":"PBO:0055940"}


id: MONDO:0022846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"jaundice, familial obstructive, of infancy","termid":"MONDO:0010634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital nonhemolytic jaundice","termid":"MONDO:0022846","xrefs":{"Monarch":{"xref_id":"0022846"}}}


id: PBO:0030182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_population","termid":"PBO:0030182"}


id: GO:0062001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac endothelial to mesenchymal transition.","definition_xrefs":["GOC:BHF","GOC:rph","PMID:26857067","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of cardiac endothelial to mesenchymal transition","termid":"GO:0061999"},{"relation_name":"negatively_regulates","term_name":"cardiac endothelial to mesenchymal transition","termid":"GO:0140074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac endothelial to mesenchymal transition","termid":"GO:0062001"}


id: PBO:0067382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 484, pseudogene","termid":"PBO:0067382"}


id: PBO:0051629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ILVBL antisense RNA 1","termid":"PBO:0051629"}


id: PBO:0029984
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore_membrane_formation","termid":"PBO:0029984"}


id: SO:0000902
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transgene is a gene that has been transferred naturally or by any of a number of genetic engineering techniques from one organism to another.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"transgenic","termid":"SO:0000781"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgene","secondary_identifiers":["http://en.wikipedia.org/wiki/Transgene"],"termid":"SO:0000902"}


id: PR:Q9UTE1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC222.13c gene.","definition_xrefs":["UniProtKB:Q9UTE1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase C222.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.13c","synonyms":[{"name":"Spom972h-SPAC222.13c","type":"exact"}],"termid":"PR:Q9UTE1"}


id: PBO:0081891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 841","termid":"PBO:0081891"}


id: GO:2000102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mammary stem cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of mammary stem cell proliferation","termid":"GO:2000101"},{"relation_name":"negatively_regulates","term_name":"mammary stem cell proliferation","termid":"GO:0002174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mammary stem cell proliferation","termid":"GO:2000102"}


id: FYECO:0000358
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing yeast extract, galactose, glucose, and other components. The concentrations of galactose and glucose are typically around 2-3% each.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YES + galactose","synonyms":[{"name":"rich medium with glucose and galactose","type":"related"}],"termid":"FYECO:0000358"}


id: GO:0061714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining selectively with extracellular folic acid and delivering it into the cell via endocytosis.","definition_xrefs":["GOC:hal","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"folic acid receptor activity","synonyms":[{"name":"folate receptor activity","type":"exact"}],"termid":"GO:0061714"}


id: GO:1990699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a hydrolase reaction that removes a palmitoleyl moiety, a 16-carbon monounsaturated fatty acid (C16:1), from some substrate.","definition_xrefs":["PMID:25731175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"palmitoleyl hydrolase activity","termid":"GO:1990699"}


id: PBO:0062247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BN member 1 pseudogene","termid":"PBO:0062247"}


id: GO:0005228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of potassium by a channel that opens in response to stimulus by a sodium ion or ions. Transport by a channel involves facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism. Sodium activated potassium channels have distinctive properties, including a large single channel conductance, subconductance states, and a block of single channel currents at positive potentials, similar to inward rectification.","definition_xrefs":["GOC:mtg_transport","PMID:12628167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"monoatomic ion-gated channel activity","termid":"GO:0022839"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"intracellular sodium-activated potassium channel activity","synonyms":[{"name":"intracellular sodium activated potassium channel activity","type":"exact"}],"termid":"GO:0005228"}


id: PBO:0111831
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein","termid":"PBO:0111831"}


id: GO:0001838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis of an embryonic epithelium into a tube-shaped structure.","definition_xrefs":["ISBN:0824072820","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic epithelial tube formation","termid":"GO:0001838"}


id: PBO:0090040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GEF Sec73","termid":"PBO:0090040"}


id: MONDO:0009828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palant cleft palate syndrome","secondary_identifiers":["MESH:C538102","OMIM:260150","MEDGEN:337971","UMLS:C1850102"],"synonyms":[{"name":"Palant cleft palate syndrome","type":"exact"},{"name":"unusual facies, cleft palate, intellectual disability, and limb abnormalities","type":"related"},{"name":"unusual facies, cleft palate, mental retardation, and limb abnormalities","type":"related"}],"termid":"MONDO:0009828","xrefs":{"Monarch":{"xref_id":"0009828"}}}


id: SO:1001197
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript that has the quality dicistronic.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"dicistronic","termid":"SO:0000879"},{"relation_name":"is_a","term_name":"dicistronic_transcript","termid":"SO:0000079"},{"relation_name":"is_a","term_name":"polycistronic_primary_transcript","termid":"SO:0000631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicistronic_primary_transcript","synonyms":[{"name":"dicistronic primary transcript","type":"exact"}],"termid":"SO:1001197"}


id: GO:2001310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the epipolythiodioxopiperazine gliotoxin, a poisonous substance produced by some species of fungi.","definition_xrefs":["GOC:di","PMID:16333108","PMID:18272357","PMID:29966253","PMID:17574915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"gliotoxin metabolic process","termid":"GO:2001308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"gliotoxin biosynthetic process","synonyms":[{"name":"gliotoxin anabolism","type":"exact"},{"name":"gliotoxin biosynthesis","type":"exact"},{"name":"gliotoxin formation","type":"exact"},{"name":"gliotoxin synthesis","type":"exact"}],"termid":"GO:2001310"}


id: MONDO:0007903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Li-Fraumeni syndrome 1 (obsolete MONDO:0007903)","termid":"MONDO:0007903","xrefs":{"Monarch":{"xref_id":"0007903"}}}


id: PBO:0017556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate-specific APC activator Slp1","termid":"PBO:0017556"}


id: FYPO:0007459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the portion of the nuclear envelope enclosing the mitotic nuclear bridge is abnormal. The nuclear bridge is a narrow constricted region of the nucleus that forms around the mitotic spindle during anaphase.","definition_xrefs":["PomBase:mah","GO:0140510","PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope morphology during mitosis","termid":"FYPO:0003779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002403","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge","synonyms":[{"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear envelope morphology at mitotic nuclear bridge during vegetative growth","type":"exact"}],"termid":"FYPO:0007459"}


id: FYPO:0004601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the S-phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is normal (i.e. indistinguishable from wild type) when the cell is exposed to hydroxyurea. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle regulation during cellular response to hydroxyurea","termid":"FYPO:0001929"},{"relation_name":"is_a","term_name":"normal S-phase DNA damage checkpoint","termid":"FYPO:0003530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000298","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal S-phase DNA damage checkpoint during cellular response to hydroxyurea","synonyms":[{"name":"normal S-phase DNA damage checkpoint activation during cellular response to hydroxyurea","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to HU","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to hydroxyurea during mitotic cell cycle","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal intra-S phase DNA damage checkpoint during cellular response to hydroxyurea","type":"exact"},{"name":"normal mitotic S-phase DNA damage checkpoint during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0004601"}


id: MONDO:0007469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double nail for fifth toe","secondary_identifiers":["MESH:C565090","MEDGEN:343705","OMIM:126500","UMLS:C1852023"],"synonyms":[{"name":"Double nails on the fifth toe","type":"related"},{"name":"double nail for fifth toe","type":"exact"},{"name":"fifth toe, double nails","type":"related"}],"termid":"MONDO:0007469","xrefs":{"Monarch":{"xref_id":"0007469"}}}


id: MONDO:0015268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Medullary sponge kidney (MSK) is a birth defect of the tubules - tiny tubes inside the kidneys. In a normal kidney, urine flows through these tubules as it is being formed. In MSK, tiny sacs called cysts form in the medulla (the inner part of the kidney), creating a sponge-like appearance. The cysts keep urine from flowing freely through the tubules. MSK is present at birth but symptoms typically do not occur until adolescence or adulthood. Problems caused by MSK include blood in the urine, kidney stones, and urinary tract infections. MSK rarely leads to more serious problems, such as total kidney failure. There is no cure for this condition, so treatment is aimed at removing kidney stones and treating urinary tract infections with antibiotics.","direct_ancestors":[{"relation_name":"is_a","term_name":"cystic kidney disease","termid":"MONDO:0002473"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"medullary sponge kidney","secondary_identifiers":["NCIT:C34751","NORD:1421","MedDRA:10027104","MESH:D007691","Orphanet:1309","NANDO:2200173","SCTID:236443009","UMLS:C0022681","GARD:232","MEDGEN:5970","icd11.foundation:1723148250","ICD9:753.17"],"synonyms":[{"name":"Cacchi Ricci disease","type":"related"},{"name":"Cacchi-Ricci disease","type":"exact"},{"name":"Cacchi-Ricci syndrome","type":"related"},{"name":"MSK","type":"exact"},{"name":"Precalicial canalicular ectasia","type":"exact"},{"name":"Precalyceal canalicular ectasia","type":"related"},{"name":"cystic dilatation of renal collecting tubes","type":"related"},{"name":"sponge kidney","type":"related"}],"termid":"MONDO:0015268","xrefs":{"Monarch":{"xref_id":"0015268"}}}


id: PBO:0043227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride channel CLIC like 1","termid":"PBO:0043227"}


id: PBO:0042039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 91","termid":"PBO:0042039"}


id: GO:0032508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating a region of unpaired single strands.","definition_xrefs":["GOC:isa_complete","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA duplex unwinding (obsolete GO:0032508)","synonyms":[{"name":"DNA unwinding","type":"exact"},{"name":"duplex DNA melting","type":"exact"}],"termid":"GO:0032508"}


id: GO:0009408
data:
  {"annotated_genes":["SJAG_03319","SJAG_03949","SJAG_00436","SJAG_04388","SJAG_02266","SJAG_01584","SJAG_02426","SJAG_04082","SJAG_03527","SJAG_02381","SJAG_04567","SJAG_04055","SJAG_01186","SJAG_03815","SJAG_04187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79392,104663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070370"},{"annotations":[89165,105352,100876,91137,110374,96815,105635,110375,115888,115889,96022,92414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034605"},{"annotations":[73550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00436":null,"SJAG_01186":null,"SJAG_01584":null,"SJAG_02266":null,"SJAG_02381":null,"SJAG_02426":null,"SJAG_03319":null,"SJAG_03527":null,"SJAG_03815":null,"SJAG_03949":null,"SJAG_04055":null,"SJAG_04082":null,"SJAG_04187":null,"SJAG_04388":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to heat","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006951"],"synonyms":[{"name":"response to heat shock","type":"narrow"}],"termid":"GO:0009408","terms_by_termid":{"GO:0031990":null,"GO:0034605":null,"GO:0070370":null}}


id: PBO:0012028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP subunit Snu40 (predicted)","termid":"PBO:0012028"}


id: PBO:0048891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 11, pseudogene","termid":"PBO:0048891"}


id: PBO:0050512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C12","termid":"PBO:0050512"}


id: GO:0019874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,8-diazacyclotetradecane-2,9-dione + H2O = N-(6-aminohexanoyl)-6-aminohexanoate.","definition_xrefs":["RHEA:16225","EC:3.5.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"6-aminohexanoate-cyclic-dimer hydrolase activity","secondary_identifiers":["UM-BBD_reactionID:r1097","KEGG_REACTION:R03448","MetaCyc:3.5.2.12-RXN"],"synonyms":[{"name":"1,8-diazacyclotetradecane-2,9-dione lactamhydrolase activity","type":"related"}],"termid":"GO:0019874"}


id: GO:0003052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates its blood pressure at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"},{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of systemic arterial blood pressure","termid":"GO:0003052"}


id: GO:0141016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Hydrolyzes mismatched double-stranded DNA and polynucleotides, releasing free thymine and leaving an apyrimidinic (AP) site.","definition_xrefs":["PMID:12711670","EC:3.2.2.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine-specific mismatch base pair DNA N-glycosylase activity","termid":"GO:0008263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"G/T mismatch-specific thymine-DNA glycosylase activity","termid":"GO:0141016"}


id: GO:0033429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CGU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"CGU codon-amino acid adaptor activity","synonyms":[{"name":"CGT codon-amino acid adaptor activity","type":"exact"},{"name":"arginine tRNA","type":"related"}],"termid":"GO:0033429"}


id: PATO:0001546
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity characterized by particles arranged such that their shape and volume are relatively stable.","definition_xrefs":["Chemistry:http://chemistry.about.com/od/chemistryglossary/a/soliddefinition.htm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a substance","termid":"PATO:0002198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quality of a solid","synonyms":[{"name":"solidity","type":"exact"}],"termid":"PATO:0001546"}


id: GO:0098506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphate groups from the 3' end of a polynucleotide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound metabolic process","termid":"GO:0006139"},{"relation_name":"is_a","term_name":"dephosphorylation","termid":"GO:0016311"},{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polynucleotide 3' dephosphorylation","termid":"GO:0098506"}


id: PBO:0003116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EH domains","termid":"PBO:0003116"}


id: MONDO:0033170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"statin toxicity","secondary_identifiers":["Orphanet:413696"],"termid":"MONDO:0033170","xrefs":{"Monarch":{"xref_id":"0033170"}}}


id: PBO:0045117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMRT like family A1","termid":"PBO:0045117"}


id: GO:0004399
data:
  {"annotated_genes":["SJAG_01137"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80634],"is_not":false,"summary":null,"term":"GO:0004399"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-histidinol + 2 NAD+ = 3 H+ + L-histidine + 2 NADH.","definition_xrefs":["RHEA:20641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01137":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"histidinol dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.1.1.23","MetaCyc:RXN-8001"],"termid":"GO:0004399","terms_by_termid":{"GO:0004399":null}}


id: MONDO:0014757
data:
  {"annotated_genes":["SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86236],"is_not":false,"summary":null,"term":"MONDO:0014757"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"macrothrombocytopenia-lymphedema-developmental delay-facial dysmorphism-camptodactyly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:487796","MEDGEN:906646","OMIM:616737","UMLS:C4225222","GARD:17884","NANDO:2200985"],"synonyms":[{"name":"TAKENOUCHI-Kosaki syndrome","type":"related"},{"name":"TKS","type":"related"},{"name":"Takenouchi-Kosaki syndrome","type":"exact"},{"name":"macrothrombocytopenia and intellectual disability syndrome","type":"related"},{"name":"macrothrombocytopenia and mental retardation syndrome","type":"related"}],"termid":"MONDO:0014757","terms_by_termid":{"MONDO:0014757":null},"xrefs":{"Monarch":{"xref_id":"0014757"}}}


id: GO:0071115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha5-beta1 integrin complex bound to endostatin, the NC1 domain of the alpha1 chain of type XVIII collagen.","definition_xrefs":["PMID:12682293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha5-beta1 integrin-endostatin complex","synonyms":[{"name":"ITGA5-ITGB1-CAL4A3 complex","type":"narrow"}],"termid":"GO:0071115"}


id: GO:0002650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction to self antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to self antigen","termid":"GO:0002649"},{"relation_name":"negatively_regulates","term_name":"tolerance induction to self antigen","termid":"GO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction to self antigen","synonyms":[{"name":"down regulation of tolerance induction to self antigen","type":"exact"},{"name":"down-regulation of tolerance induction to self antigen","type":"exact"},{"name":"downregulation of tolerance induction to self antigen","type":"exact"},{"name":"inhibition of tolerance induction to self antigen","type":"narrow"}],"termid":"GO:0002650"}


id: PBO:0038634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitase 2","termid":"PBO:0038634"}


id: GO:0047450
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3R)-hydroxybutanoyl-[acyl-carrier-protein] = (2E)-butenoyl-[acyl-carrier-protein] + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete (3R)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase activity (obsolete GO:0047450)","synonyms":[{"name":"(3R)-hydroxybutanoyl-[acyl-carrier-protein] hydratase activity","type":"exact"},{"name":"3-hydroxybutyryl acyl carrier protein dehydratase activity","type":"exact"},{"name":"beta-hydroxybutyryl acyl carrier protein (ACP) dehydrase activity","type":"exact"},{"name":"crotonoyl-ACP hydratase activity","type":"exact"},{"name":"crotonoyl-[acyl-carrier protein] hydratase activity","type":"exact"},{"name":"crotonoyl-[acyl-carrier-protein] hydratase activity","type":"exact"},{"name":"crotonoyl-acyl-carrier-protein hydratase activity","type":"exact"},{"name":"crotonyl acyl carrier protein hydratase activity","type":"exact"}],"termid":"GO:0047450"}


id: MONDO:0019706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lysosomal storage disease with skeletal involvement (obsolete MONDO:0019706)","termid":"MONDO:0019706","xrefs":{"Monarch":{"xref_id":"0019706"}}}


id: GO:0090051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of cell migration involved in sprouting angiogenesis. Cell migration involved in sprouting angiogenesis is the orderly movement of endothelial cells into the extracellular matrix in order to form new blood vessels contributing to the process of sprouting angiogenesis.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:rl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood vessel endothelial cell migration","termid":"GO:0043537"},{"relation_name":"is_a","term_name":"regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090049"},{"relation_name":"negatively_regulates","term_name":"cell migration involved in sprouting angiogenesis","termid":"GO:0002042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell migration involved in sprouting angiogenesis","termid":"GO:0090051"}


id: PBO:0051470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (I)-68 (pseudogene)","termid":"PBO:0051470"}


id: MONDO:0035002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete isolated inherited retinal disorder (obsolete MONDO:0035002)","secondary_identifiers":["Orphanet:520817"],"termid":"MONDO:0035002","xrefs":{"Monarch":{"xref_id":"0035002"}}}


id: PBO:0058224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4514","termid":"PBO:0058224"}


id: PBO:0072661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 3","termid":"PBO:0072661"}


id: MONDO:0018068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 13 is a chromosomal anomaly caused by the presence of an extra chromosome 13 and is characterized by brain malformations (holoprosencephaly), facial dysmorphism, ocular anomalies, postaxial polydactyly, visceral malformations (cardiopathy) and severe psychomotor retardation.","definition_xrefs":["Orphanet:3378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital vitreoretinal dysplasia","termid":"MONDO:0020247"},{"relation_name":"is_a","term_name":"chromosome 13 disorder","termid":"MONDO:0700020"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"trisomy 13","secondary_identifiers":["SCTID:21111006","DOID:11665","GARD:7341","icd11.foundation:1435958084","MESH:C536305","ICD9:758.1","NANDO:2200964","NORD:1796","MedDRA:10044686","MEDGEN:56261","NCIT:C36529","NCIT:C101223","UMLS:C0152095"],"synonyms":[{"name":"D trisomy syndrome (formerly)","type":"related"},{"name":"D1 trisomy","type":"related"},{"name":"Patau syndrome","type":"exact"},{"name":"Patau's syndrome","type":"exact"},{"name":"Trisomy 13 Syndrome","type":"exact"},{"name":"chromosome 13, trisomy 13 complete","type":"related"},{"name":"trisomy 13","type":"exact"},{"name":"trisomy type 13","type":"exact"}],"termid":"MONDO:0018068","xrefs":{"Monarch":{"xref_id":"0018068"}}}


id: GO:1900111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K9 dimethylation.","definition_xrefs":["GOC:vw","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K9 dimethylation (obsolete GO:1900111)","synonyms":[{"name":"activation of histone H3 K9 dimethylation","type":"narrow"},{"name":"activation of histone H3-K9 dimethylation","type":"narrow"},{"name":"activation of histone lysine H3 K9 dimethylation","type":"narrow"},{"name":"positive regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"positive regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"up regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"up regulation of histone H3-K9 dimethylation","type":"exact"},{"name":"up regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"up-regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"up-regulation of histone H3-K9 dimethylation","type":"exact"},{"name":"up-regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"upregulation of histone H3 K9 dimethylation","type":"exact"},{"name":"upregulation of histone H3-K9 dimethylation","type":"exact"},{"name":"upregulation of histone lysine H3 K9 dimethylation","type":"exact"}],"termid":"GO:1900111"}


id: GO:0004968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with gonadotropin-releasing hormone to initiate a change in cell activity. Gonadotropin-releasing hormone (GnRH) is a peptide hormone responsible for the release of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) from the anterior pituitary. GnRH is synthesized and released by the hypothalamus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"gonadotropin-releasing hormone receptor activity","synonyms":[{"name":"GnRH receptor activity","type":"exact"},{"name":"gonadotrophin-releasing hormone receptor activity","type":"exact"}],"termid":"GO:0004968"}


id: FYPO:0005316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 12 of histone H4 in subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PMID:22771823","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation during vegetative growth","termid":"FYPO:0002365"},{"relation_name":"is_a","term_name":"increased histone H4-K12 acetylation during vegetative growth","termid":"FYPO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation at subtelomere during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K12 acetylation at subtelomeric region during vegetative growth","type":"exact"},{"name":"increased histone H4K12 acetylation at subtelomere during vegetative growth","type":"exact"},{"name":"increased subtelomeric histone H4K12 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005316"}


id: GO:0061830
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The concave part of the late spermatid head or spermatozoon head that forms the ventral portion of the head, particularly in some rodent species.","definition_xrefs":["PMID:23403943","PMID:22332112","PMID:26990065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm head","termid":"GO:0061827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"concave side of sperm head","termid":"GO:0061830"}


id: MONDO:0009306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"combined immunodeficiency with skin granulomas","secondary_identifiers":["Orphanet:157949","GARD:13587","MEDGEN:435945","DOID:0112253","MESH:C567115","OMIM:233650","UMLS:C2673536"],"synonyms":[{"name":"CCHIDG","type":"related"},{"name":"CID due to RAG 1/2 deficiency","type":"exact"},{"name":"combined cellular and humoral immune defects with granulomas","type":"related"},{"name":"combined immunodeficiency due to RAG 1/2 deficiency","type":"exact"}],"termid":"MONDO:0009306","xrefs":{"Monarch":{"xref_id":"0009306"}}}


id: PATO:0001274
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of grey color and low saturation.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001274 pale grey (obsolete PATO:0001274)","termid":"PATO:0001274"}


id: MONDO:0024318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral infection of central nervous system","secondary_identifiers":["UMLS:C0348165","MESH:D020805","ICD10CM:A80-A89","ICD10WHO:A80-A89","MEDGEN:91141","SCTID:302810003"],"synonyms":[{"name":"central nervous system viral infection","type":"related"},{"name":"viral disease of central nervous system","type":"related"},{"name":"viral infection of central nervous system","type":"exact"}],"termid":"MONDO:0024318","xrefs":{"Monarch":{"xref_id":"0024318"}}}


id: PBO:0004490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding complex small subunit (predicted)","termid":"PBO:0004490"}


id: PBO:0047624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIGNL2 divergent transcript","termid":"PBO:0047624"}


id: GO:0008869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactonate = 2-dehydro-3-deoxy-D-galactonate + H2O.","definition_xrefs":["RHEA:18649","EC:4.2.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"galactonate dehydratase activity","secondary_identifiers":["MetaCyc:GALACTONDEHYDRAT-RXN","KEGG_REACTION:R03033"],"synonyms":[{"name":"D-galactonate dehydrase activity","type":"related"},{"name":"D-galactonate dehydratase activity","type":"related"},{"name":"D-galactonate hydro-lyase (2-dehydro-3-deoxy-D-galactonate-forming)","type":"related"},{"name":"D-galactonate hydro-lyase activity","type":"related"}],"termid":"GO:0008869"}


id: GO:0060443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the mammary gland are generated and organized. Morphogenesis refers to the creation of shape. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland morphogenesis","termid":"GO:0060443"}


id: PBO:0066669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ripply transcriptional repressor 2","termid":"PBO:0066669"}


id: PBO:0088880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anillin-related medial ring protein Mid1","termid":"PBO:0088880"}


id: GO:0046212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of methyl ethyl ketone, a clear, colorless liquid with a fragrant, mint-like odor. It is used as a solvent and in making plastics, textiles and paints.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete methyl ethyl ketone biosynthetic process (obsolete GO:0046212)","synonyms":[{"name":"methyl ethyl ketone anabolism","type":"exact"},{"name":"methyl ethyl ketone biosynthesis","type":"exact"},{"name":"methyl ethyl ketone biosynthetic process","type":"exact"},{"name":"methyl ethyl ketone formation","type":"exact"},{"name":"methyl ethyl ketone synthesis","type":"exact"}],"termid":"GO:0046212"}


id: PBO:0066829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 128","termid":"PBO:0066829"}


id: MONDO:0017406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism-severe microcephaly-sensorineural hearing loss-dysmorphism syndrome","secondary_identifiers":["MEDGEN:1663043","Orphanet:293967","GARD:21174","UMLS:C4751123"],"synonyms":[{"name":"hypogonadotropic hypogonadism-severe microcephaly-sensorineural deafness-dysmorphism syndrome","type":"exact"}],"termid":"MONDO:0017406","xrefs":{"Monarch":{"xref_id":"0017406"}}}


id: PBO:0027680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_transcription_during_vegetative_growth","termid":"PBO:0027680"}


id: PBO:0086984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of type 1 protein phosphatase Glc7p; involved in negative regulation of glucose-repressible genes; involved in regulation of the nucleocytoplasmic shuttling of Hxk2p; REG1 has a paralog, REG2, that arose from the whole genome duplication","termid":"PBO:0086984"}


id: PATO:0000700
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's irregular surface.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rough","secondary_identifiers":["PATO:0001616"],"synonyms":[{"name":"coarse","type":"exact"}],"termid":"PATO:0000700"}


id: GO:0019530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving taurine (2-aminoethanesulfonic acid), a sulphur-containing amino acid derivative important in the metabolism of fats.","definition_xrefs":["GOC:jl","ISBN:0198600461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"taurine metabolic process","synonyms":[{"name":"taurine metabolism","type":"exact"}],"termid":"GO:0019530"}


id: PBO:0030737
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_arrest_in_mitotic_G1_phase_during_nitrogen_starvation","termid":"PBO:0030737"}


id: PBO:0054694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2103","termid":"PBO:0054694"}


id: MONDO:0010660
data:
  {"annotated_genes":["SJAG_01269"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85381],"is_not":false,"summary":null,"term":"MONDO:0010660"}]},"cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the FTSJ1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01269":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0796215","DOID:0112034","MESH:C563137","GARD:22700","MEDGEN:167112","OMIM:309549"],"synonyms":[{"name":"FTSJ1 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"MRX9","type":"related"},{"name":"intellectual developmental disorder, X-linked 9, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 44","type":"related"},{"name":"intellectual disability, X-linked 9","type":"exact"},{"name":"intellectual disability, X-linked type 9","type":"exact"},{"name":"mental retardation, X-linked 44","type":"related"},{"name":"mental retardation, X-linked 9","type":"related"},{"name":"mental retardation, X-linked type 9","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in FTSJ1","type":"exact"}],"termid":"MONDO:0010660","terms_by_termid":{"MONDO:0010660":null},"xrefs":{"Monarch":{"xref_id":"0010660"}}}


id: PBO:0016589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha ketoglutarate dependent xanthine dioxygenase Xan1","termid":"PBO:0016589"}


id: PBO:0063961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 2","termid":"PBO:0063961"}


id: GO:1905132
data:
  {"annotated_genes":["SJAG_01082","SJAG_03327","SJAG_01837","SJAG_04126","SJAG_01330","SJAG_01515","SJAG_00145","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114882,106679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[75746,117058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[99023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[114170],"is_not":false,"rel_names":["regulates","is_a","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[95495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[101678],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic chromosome separation.","definition_xrefs":["GOC:TermGenie","PMID:15620645","GOC:vw","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome separation","termid":"GO:1905818"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of meiotic chromosome separation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chromosome separation during meiosis","type":"exact"},{"name":"regulation of meiotic chromosome resolution","type":"exact"}],"termid":"GO:1905132","terms_by_termid":{"GO:0033316":null,"GO:1902103":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0052346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 2C","termid":"PBO:0052346"}


id: MONDO:0023692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A maple syrup urine disease caused by mutations in BCKDHB.","direct_ancestors":[{"relation_name":"is_a","term_name":"maple syrup urine disease","termid":"MONDO:0009563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"maple syrup urine disease type 1B","secondary_identifiers":["MEDGEN:443951","UMLS:C2930990","GARD:8597","OMIM:620698"],"synonyms":[{"name":"MSUD due to deficiency of E1-beta subunit of branched-chain alpha-keto acid dehydrogenase complex","type":"related"},{"name":"MSUD type 3 (formerly)","type":"related"},{"name":"MSUD type IB","type":"related"},{"name":"maple syrup urine disease type 1B","type":"exact"}],"termid":"MONDO:0023692","xrefs":{"Monarch":{"xref_id":"0023692"}}}


id: FYPO:0001668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein processing is normal (i.e. indistinguishable from wild type). Protein processing is any protein maturation process achieved by the cleavage of a peptide bond or bonds within a protein.","definition_xrefs":["GO:0016485","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein processing during vegetative growth","synonyms":[{"name":"normal protein processing during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001668"}


id: MONDO:0001123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the sphenoid sinus that typically lasts beyond eight weeks. It is caused by infections, allergies, and the presence of sinus polyps or a deviated septum. Signs and symptoms include headache, nasal discharge, swelling in the face, dizziness, and breathing difficulties.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphenoid sinusitis","termid":"MONDO:0005964"},{"relation_name":"is_a","term_name":"chronic rhinosinusitis","termid":"MONDO:0006031"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic sphenoidal sinusitis","secondary_identifiers":["ICD9:473.3","SCTID:38961000","icd11.foundation:627227610","MEDGEN:3087","NCIT:C34480","UMLS:C0008712","ICD10CM:J32.3","DOID:10793"],"synonyms":[{"name":"chronic sphenoid sinusitis","type":"exact"},{"name":"sphenoid sinusitis, chronic","type":"exact"},{"name":"sphenoidal sinus-chr.","type":"exact"}],"termid":"MONDO:0001123","xrefs":{"Monarch":{"xref_id":"0001123"}}}


id: GO:0150066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of deacetylase activity.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:19457097"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of deacetylase activity (obsolete GO:0150066)","termid":"GO:0150066"}


id: MONDO:0018799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare hypercholesterolemia.","gene_count":0,"genotype_count":0,"name":"obsolete rare hypercholesterolemia (obsolete MONDO:0018799)","secondary_identifiers":["Orphanet:477811"],"synonyms":[{"name":"rare hypercholesterolemia","type":"exact"}],"termid":"MONDO:0018799","xrefs":{"Monarch":{"xref_id":"0018799"}}}


id: PBO:0047290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 1","termid":"PBO:0047290"}


id: PBO:0041271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 3","termid":"PBO:0041271"}


id: MONDO:0002128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A painful asymmetric asynchronous sensory and motor peripheral neuropathy involving isolated damage to at least 2 separate nerve areas; associated with (but not limited to) systemic disorders such as diabetes, vasculitis, amyloidosis, direct tumor involvement, polyarteritis nodosa, rheumatoid arthritis, systemic lupus erythematosus, and paraneoplastic syndromes. It also may be associated with Lyme disease, Wegener's granulomatosis, Sjogren syndrome, cryoglobulinemia, hypereosinophilia, temporal arteritis, scleroderma, sarcoidosis, leprosy, acute viral hepatitis A, and acquired immunodeficiency syndrome.","definition_xrefs":["NCIT:C70938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuritis of upper limb","termid":"MONDO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"mononeuritis multiplex","secondary_identifiers":["DOID:1835","ICD10CM:G58.7","ICD9:354.5","SCTID:30292005","icd11.foundation:1838368265","GARD:7056","MEDGEN:101790","UMLS:C0151295"],"synonyms":[{"name":"mononeuritis multiplex","type":"exact"}],"termid":"MONDO:0002128","xrefs":{"Monarch":{"xref_id":"0002128"}}}


id: GO:0060244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of cell proliferation in response to cell density.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"part_of","term_name":"contact inhibition","termid":"GO:0060242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation involved in contact inhibition","termid":"GO:0060244"}


id: PBO:0113562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex gamma subunit, Ost3","termid":"PBO:0113562"}


id: GO:2000857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mineralocorticoid secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of corticosteroid hormone secretion","termid":"GO:2000848"},{"relation_name":"is_a","term_name":"regulation of mineralocorticoid secretion","termid":"GO:2000855"},{"relation_name":"positively_regulates","term_name":"mineralocorticoid secretion","termid":"GO:0035931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of mineralocorticoid secretion","termid":"GO:2000857"}


id: PBO:0081881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 829","termid":"PBO:0081881"}


id: PBO:0026832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_at_mating_type_region","termid":"PBO:0026832"}


id: GO:0106355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + H+ + NADH + O2 = 3,4-dihydroxybenzoate + H2O + NAD+.","definition_xrefs":["RHEA:19473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-hydroxybenzoate 3-monooxygenase [NAD(P)H] activity","termid":"GO:0018671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-hydroxybenzoate 3-monooxygenase (NADH) activity","termid":"GO:0106355"}


id: PBO:0034303
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_evidence_with_support_from","termid":"PBO:0034303"}


id: PBO:0078073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking kinesin protein 2","termid":"PBO:0078073"}


id: PR:P36592
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad52 gene.","definition_xrefs":["UniProtKB:P36592","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair and recombination protein rad22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.10","synonyms":[{"name":"Spom972h-rad52","type":"exact"}],"termid":"PR:P36592"}


id: PBO:0091605
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2 sequence errors 5368262TC->T 5368273 and G->GT would change amino acids PPIYGL to PPYTVL","termid":"PBO:0091605"}


id: PBO:0109457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-amino acid N-acetyltransferase","termid":"PBO:0109457"}


id: PBO:0028876
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_M26_site","termid":"PBO:0028876"}


id: PBO:0081412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 264","termid":"PBO:0081412"}


id: MONDO:0003658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of lymphomas displaying molecular, morphologic, immunophenotypic, and clinical overlap between classical Hodgkin lymphoma and diffuse large B-cell lymphoma. This term particularly applies to mediastinal lymphomas with overlapping features of mediastinal (thymic) large B-cell lymphoma and classical Hodgkin lymphoma.","definition_xrefs":["NCIT:C37869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"B-cell lymphoma, unclassifiable, with features intermediate between diffuse large b-cell lymphoma and classical Hodgkin lymphoma","secondary_identifiers":["ICDO:9596/3","GARD:10897","UMLS:C1333878","MEDGEN:234323","DOID:5822"],"synonyms":[{"name":"B-cell lymphoma, unclassifiable, with features Intermediate between diffuse large B-cell lymphoma and Classic Hodgkin lymphoma","type":"exact"},{"name":"B-cell lymphoma, unclassifiable, with features Intermediate between diffuse large B-cell lymphoma and classical Hodgkin lymphoma","type":"exact"},{"name":"Gray zone lymphoma","type":"exact"},{"name":"Grey zone lymphoma","type":"exact"},{"name":"Hodgkin-like anaplastic large cell lymphoma","type":"exact"},{"name":"large B-cell lymphoma with Hodgkin features","type":"exact"}],"termid":"MONDO:0003658","xrefs":{"Monarch":{"xref_id":"0003658"}}}


id: PBO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.54","termid":"PBO:0000382"}


id: GO:0052005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of the ethylene-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"},{"relation_name":"is_a","term_name":"symbiont-mediated modulation of host ethylene-mediated defense response","termid":"GO:0052084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host ethylene-mediated defense response","secondary_identifiers":["GO:0052268","GO:0052254","GO:0052070"],"synonyms":[{"name":"down regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"down-regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"downregulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"inhibition by symbiont of host ethylene-mediated defense response","type":"narrow"},{"name":"negative regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by symbiont of defense-related host ethylene-mediated signal transduction pathway","type":"broad"},{"name":"negative regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"suppression by organism of host ethylene-mediated defense response","type":"exact"},{"name":"suppression by symbiont of host ethylene-mediated defense response","type":"exact"}],"termid":"GO:0052005"}


id: GO:0048787
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The membrane portion of the presynaptic active zone; it is the site where docking and fusion of synaptic vesicles occurs for the release of neurotransmitters.","definition_xrefs":["PMID:12923177","PMID:12812759","PMID:3152289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"presynaptic membrane","termid":"GO:0042734"},{"relation_name":"part_of","term_name":"presynaptic active zone","termid":"GO:0048786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"presynaptic active zone membrane","secondary_identifiers":["NIF_Subcellular:sao2038461087"],"synonyms":[{"name":"active zone plasma membrane","type":"exact"},{"name":"active zone pre-synaptic plasma membrane","type":"exact"},{"name":"active zone presynaptic plasma membrane","type":"exact"},{"name":"pre-synaptic active zone membrane","type":"exact"}],"termid":"GO:0048787"}


id: GO:1905578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ERBB3 signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:als","GOC:TermGenie","PMID:27353365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ERBB signaling pathway","termid":"GO:1901184"},{"relation_name":"regulates","term_name":"ERBB3 signaling pathway","termid":"GO:0038129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of ERBB3 signaling pathway","synonyms":[{"name":"regulation of ERBB3 signalling pathway","type":"exact"},{"name":"regulation of HER3 signaling pathway","type":"exact"},{"name":"regulation of receptor tyrosine-protein kinase erbB-3 signaling pathway","type":"exact"}],"termid":"GO:1905578"}


id: GO:0000966
data:
  {"annotated_genes":["SJAG_03901","SJAG_00772","SJAG_04233","SJAG_04224","SJAG_06613","SJAG_04582","SJAG_04767","SJAG_02250","SJAG_01724","SJAG_04006","SJAG_00195","SJAG_03796","SJAG_04524","SJAG_01623","SJAG_01713","SJAG_02526","SJAG_00955","SJAG_04488","SJAG_04527","SJAG_04034"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036261"},{"annotations":[72543,69048,75888,108055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006370"},{"annotations":[102506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106410"},{"annotations":[109373,70773,78303,73359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000472"},{"annotations":[107817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000465"},{"annotations":[79538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000964"},{"annotations":[59800],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106005"},{"annotations":[95731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000967"},{"annotations":[61208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099116"},{"annotations":[71613,60656,98809,79604,59233,64721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001682"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of an RNA molecule.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00195":null,"SJAG_00772":null,"SJAG_00955":null,"SJAG_01623":null,"SJAG_01713":null,"SJAG_01724":null,"SJAG_02250":null,"SJAG_02526":null,"SJAG_03796":null,"SJAG_03901":null,"SJAG_04006":null,"SJAG_04034":null,"SJAG_04224":null,"SJAG_04233":null,"SJAG_04488":null,"SJAG_04524":null,"SJAG_04527":null,"SJAG_04582":null,"SJAG_04767":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA 5'-end processing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"RNA 5' end processing","type":"exact"}],"termid":"GO:0000966","terms_by_termid":{"GO:0000465":null,"GO:0000472":null,"GO:0000964":null,"GO:0000967":null,"GO:0001682":null,"GO:0006370":null,"GO:0036261":null,"GO:0099116":null,"GO:0106005":null,"GO:0106410":null}}


id: PBO:0085600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cell separation during budding; one of two S. cerevisiae homologs (Sds23p and Sds24p) of the S. pombe Sds23 protein, which is implicated in APC/cyclosome regulation; may play an indirect role in fluid-phase endocytosis; protein abundance increases in response to DNA replication stress; SDS24 has a paralog, SDS23, that arose from the whole genome duplication","termid":"PBO:0085600"}


id: PATO:0002453
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer bring gradually worn away.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eroding","termid":"PATO:0002453"}


id: GO:0075521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, towards the host cell nucleus using host microtubules.","definition_xrefs":["VZ:983","UniProtKB-KW:KW-1177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-dependent intracellular transport of viral material","termid":"GO:0075519"},{"relation_name":"is_a","term_name":"transport of viral material towards nucleus","termid":"GO:0075606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule-dependent intracellular transport of viral material towards nucleus","synonyms":[{"name":"microtubule-dependent intracellular transport of viral material to nucleus","type":"exact"}],"termid":"GO:0075521"}


id: FYPO:0006637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips is decreased, and an increased amount of the protein is instead detected distributed throughout the cell cortex.","definition_xrefs":["PomBase:mah","PMID:29930085"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mislocalized protein distributed in cell cortex","termid":"FYPO:0006636"},{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"},{"relation_name":"is_a","term_name":"decreased protein localization to cell tip, with protein distributed in plasma membrane or cortex","termid":"FYPO:0003208"},{"relation_name":"is_a","term_name":"decreased protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0005798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to cell cortex of cell tip, with protein distributed in cortex","synonyms":[{"name":"decreased protein localisation to cell cortex of cell tip, with protein distributed in cortex during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell cortex of cell end, with protein distributed in cortex during vegetative growth","type":"exact"},{"name":"decreased protein localization to cell cortex of cell tip, with protein distributed in cortex, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to of cell tip cortex, with protein distributed in cortex","type":"exact"},{"name":"reduced protein localization to cell cortex of cell tip, with protein distributed in cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0006637"}


id: PBO:0074158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member F2","termid":"PBO:0074158"}


id: GO:0009879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of an organism's body plan or a part of an organism such that it is symmetric around a central axis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of symmetry","termid":"GO:0009799"},{"relation_name":"part_of","term_name":"radial pattern formation","termid":"GO:0009956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of radial symmetry","synonyms":[{"name":"determination of radial asymmetry","type":"exact"}],"termid":"GO:0009879"}


id: GO:0017076
data:
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id: PBO:0067627
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id: GO:0044635
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id: MOD:00418
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id: PBO:0043667
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id: GO:1905795
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id: GO:0072158
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id: GO:0018710
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id: PBO:0083364
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id: PBO:0050895
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id: GO:0016203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which a skeletal muscle attaches to its target (such as bone or body wall).","definition_xrefs":["GOC:isa_complete","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"skeletal muscle organ development","termid":"GO:0060538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle attachment","termid":"GO:0016203"}


id: GO:1905389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leukotriene B4 stimulus.","definition_xrefs":["PMID:14656734","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to leukotriene B4","synonyms":[{"name":"response to LTB4","type":"exact"}],"termid":"GO:1905389"}


id: MONDO:0009520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3-hydroxy-3-methylglutaric aciduria (3HMG) is an organic aciduria, due to deficiency of 3-hydroxy-3-methylglutaryl-CoA-lyase (a key enzyme in ketogenesis and leucine metabolism) usually presenting in infancy with episodes of metabolic decompensation triggered by periods of fasting or infections, which when left untreated are life-threatening and may lead to neurological sequelae.","definition_xrefs":["Orphanet:20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"3-hydroxy-3-methylglutaric aciduria","secondary_identifiers":["GARD:8387","MEDGEN:78692","OMIM:246450","SCTID:410059004","UMLS:C0268601","NANDO:2200497","MESH:C538324","icd11.foundation:795785192","NANDO:2201119","NCIT:C84523","DOID:0070541"],"synonyms":[{"name":"3-OH 3-Methyl glutaric aciduria","type":"exact"},{"name":"3-hydroxy-3-methylglutaric aciduria","type":"exact"},{"name":"3-hydroxy-3-methylglutaryl-CoA lyase deficiency","type":"exact"},{"name":"HL deficiency","type":"related"},{"name":"HMG CoA lyase deficiency","type":"related"},{"name":"HMG-CoA lyase deficiency","type":"exact"},{"name":"HMG-Coa lyase deficiency","type":"related"},{"name":"HMGCLD","type":"related"},{"name":"Hmgcl deficiency","type":"related"},{"name":"Hydroxymethylglutaric aciduria","type":"exact"},{"name":"defect in leucine metabolism","type":"related"},{"name":"deficiency of hydroxymethylglutaryl-CoA lyase","type":"exact"},{"name":"hydroxymethylglutaryl-CoA lyase deficiency","type":"exact"}],"termid":"MONDO:0009520","xrefs":{"Monarch":{"xref_id":"0009520"}}}


