# terms

id: PBO:0065855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB12, member RAS oncogene family","termid":"PBO:0065855"}


id: FYPO:0008201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell enters the meiotic cell cycle normally: i.e after conjugation with cellular fusion and karyogamy with nuclear fusion.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic cell cycle entry","termid":"FYPO:0008201"}


id: SO:1000065
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation causing a disruption of the translational reading frame, because the number of nucleotides inserted or deleted is not a multiple of three.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000065 frameshift_sequence_variation (obsolete SO:1000065)","secondary_identifiers":["http://en.wikipedia.org/wiki/Frameshift_mutation"],"synonyms":[{"name":"frameshift mutation","type":"exact"},{"name":"frameshift sequence variation","type":"related"},{"name":"out of frame mutation","type":"related"}],"termid":"SO:1000065"}


id: PBO:0060700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDUFA4 mitochondrial complex associated like 2","termid":"PBO:0060700"}


id: PBO:0087678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; termed subunit I or subunit j; does not correspond to known ATP synthase subunits in other organisms","termid":"PBO:0087678"}


id: PBO:0035706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cytoplasmic_microtubule_nucleation_during_mitotic_interphase","termid":"PBO:0035706"}


id: FYPO:0004508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation does not occur at the rDNA repeat regions. The remainder of the sister chromatids may or may not separate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rDNA separation","termid":"FYPO:0000671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0000337"],"is_obsolete":false,"name":"abolished rDNA separation","synonyms":[{"name":"abolished mitotic sister chromatid separation at rDNA","type":"exact"},{"name":"abolished rDNA separation during mitosis","type":"exact"},{"name":"abolished rDNA separation during mitotic cell cycle","type":"related"},{"name":"abolished rDNA separation during vegetative growth","type":"exact"},{"name":"abolished ribosomal DNA separation","type":"exact"},{"name":"abolished segregation of nucleolar rDNA","type":"related"}],"termid":"FYPO:0004508"}


id: FYPO:0007240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell polarity phenotype in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) differs between the two daughter cells formed as a result of cell division. Normally, growth begins at the old end and then becomes bipolar with similar timing in both daughter cells.","definition_xrefs":["PomBase:mah","PMID:31719163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal NETO","termid":"FYPO:0000147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005568","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal NETO in daughter cells","synonyms":[{"name":"abnormal NETO in daughter cells during mitotic cell cycle","type":"related"},{"name":"abnormal NETO in daughter cells during vegetative growth","type":"exact"},{"name":"abnormal activation of bipolar cell growth in daughter cells","type":"related"},{"name":"abnormal cell growth mode switching, monopolar to bipolar, in daughter cells","type":"exact"},{"name":"abnormal new end take-off in daughter cells","type":"exact"},{"name":"abnormal switch from monopolar to bipolar cell growth in daughter cells","type":"exact"}],"termid":"FYPO:0007240"}


id: GO:0120002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic vesicle which contains two urothelial plaques and can deliver these plaques to the apical plasma membrane of urothelial superficial (umbrella) cells. It can also be formed by endocytosis of apical plasma membrane during contractions of the urinary bladder.","definition_xrefs":["GOC:krc","PMID:21887288","PMID:21468280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"fusiform vesicle","termid":"GO:0120002"}


id: PBO:0030273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_mitotic_DNA_replication_initiation_resulting_in_complete_rereplication","termid":"PBO:0030273"}


id: GO:0060768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of epithelial cell proliferation that contributes to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"epithelial cell proliferation involved in prostate gland development","termid":"GO:0060767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial cell proliferation involved in prostate gland development","termid":"GO:0060768"}


id: MONDO:0100363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any herpes simplex type 2 infectious disease that involves the genitals.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genital herpes","termid":"MONDO:0005770"},{"relation_name":"is_a","term_name":"herpes simplex type 2 infectious disease","termid":"MONDO:0100360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genital herpes simplex type 2 infectious disorder","termid":"MONDO:0100363","xrefs":{"Monarch":{"xref_id":"0100363"}}}


id: GO:1901925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the movement of proteins from the cytoplasm into the nucleus, and that occurs as a response to the mitotic cell cycle spindle assembly checkpoint. In S. cerevisiae, this process involves inhibition of the karyopherin/importin Kap121p (also known as Pse1p), which acts as the specific nuclear import receptor for several proteins, including Glc7p. Glc7p functions in opposition to key spindle assembly checkpoint protein Aurora kinase (Ipl1p).","definition_xrefs":["GOC:TermGenie","GOC:dgf","PMID:23177738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle spindle assembly checkpoint signaling","termid":"GO:0072479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein import into nucleus during spindle assembly checkpoint","synonyms":[{"name":"KTIP","type":"related"},{"name":"Kap121p transport inhibitory pathway","type":"related"},{"name":"negative regulation of protein import into nucleus during mitotic cell cycle spindle assembly checkpoint","type":"exact"}],"termid":"GO:1901925"}


id: PBO:0027729
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_mitochondrion","termid":"PBO:0027729"}


id: PBO:0049966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 12","termid":"PBO:0049966"}


id: MONDO:0012334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 29 (SPG29) is a complex form of hereditary spastic paraplegia characterized by a spastic paraplegia presenting in adolescence, associated with the additional manifestations of sensorial hearing impairment due to auditory neuropathy and persistent vomiting due to a hiatal or paraesophageal hernia.","definition_xrefs":["Orphanet:101009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"hereditary spastic paraplegia 29","secondary_identifiers":["UMLS:C1857855","GARD:9729","MEDGEN:346682","OMIM:609727","DOID:0110780","SCTID:733029008","MESH:C536863"],"synonyms":[{"name":"SPG29","type":"exact"},{"name":"autosomal dominant spastic paraplegia 29","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 29","type":"related"},{"name":"hereditary spastic paraplegia type 29","type":"exact"},{"name":"spastic paraplegia 29","type":"related"},{"name":"spastic paraplegia 29, autosomal dominant","type":"related"}],"termid":"MONDO:0012334","xrefs":{"Monarch":{"xref_id":"0012334"}}}


id: FYPO:0000849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in the cytoplasm of a cell is higher than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cytoplasmic protein level during vegetative growth","synonyms":[{"name":"cytoplasmic accumulation of protein","type":"exact"},{"name":"cytoplasmic protein accumulation during vegetative growth","type":"exact"},{"name":"increased cytoplasmic protein level during mitotic cell cycle","type":"related"},{"name":"increased protein level in cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0000849"}


id: GO:0007610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The internally coordinated responses (actions or inactions) of animals (individuals or groups) to internal or external stimuli, via a mechanism that involves nervous system activity.","definition_xrefs":["GOC:jl","ISBN:0395448956","PMID:20160973","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavior","secondary_identifiers":["Wikipedia:Behavior","GO:0044709","GO:0023032","GO:0044708"],"synonyms":[{"name":"behavioral response to stimulus","type":"exact"},{"name":"behaviour","type":"exact"},{"name":"behavioural response to stimulus","type":"exact"},{"name":"single-organism behavior","type":"related"}],"termid":"GO:0007610"}


id: PBO:0054520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1920","termid":"PBO:0054520"}


id: PBO:0113505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; produces two isoforms based on alternative translational starts; localizes to the nucleus and mitochondrion, producing N2,N2-dimethylguanosine in tRNAs; involved in the methylation of guanosine and uridine ribonucleosides in mRNA; nuclear Trm1p is evenly distributed around the inner nuclear membrane in WT, but mislocalizes as puncta near ER-nucleus junctions in spindle pole body mutants; both Trm1p inner nuclear membrane targeting and maintenance depend upon the SPB","termid":"PBO:0113505"}


id: GO:1905394
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a retromer complex.","definition_xrefs":["GOC:bc","GOC:PARL","PMID:27385586","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"retromer complex binding","termid":"GO:1905394"}


id: PBO:0066033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 2","termid":"PBO:0066033"}


id: MOD:00175
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N-seryl-glycosylsphingolipidinositolethanolamine.","definition_xrefs":["PubMed:12626404","PubMed:8269952","RESID:AA0166","PubMed:2721485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylsphingolipidinositolated residue","termid":"MOD:00466"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:00764","MOD:01155"],"is_obsolete":false,"name":"N-seryl-glycosylsphingolipidinositolethanolamine","synonyms":[{"name":"GSISer","type":"exact"},{"name":"LIPID GPI-like-anchor amidated serine","type":"exact"},{"name":"N-seryl-glycosylsphingolipidinositolethanolamine","type":"exact"}],"termid":"MOD:00175"}


id: PBO:0089871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase T subunit","termid":"PBO:0089871"}


id: GO:0000720
data:
  {"annotated_genes":["SJAG_03613","SJAG_00500"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117082,117083],"is_not":false,"summary":null,"term":"GO:0000720"}]},"cv_name":"biological_process","definition":"The repair of UV-induced T-T, C-T, and C-C dimers by the recognition and removal of the damaged DNA strand from the DNA helix as an oligonucleotide. The small gap left in the DNA helix is filled in by the sequential action of DNA polymerase and DNA ligase.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair","termid":"GO:0006289"},{"relation_name":"is_a","term_name":"pyrimidine dimer repair","termid":"GO:0006290"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00500":null,"SJAG_03613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine dimer repair by nucleotide-excision repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000720","terms_by_termid":{"GO:0000720":null}}


id: MONDO:0001549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute kidney injury associated with microangiopathic hemolytic anemia and thrombocytopenia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hemolytic anemia","termid":"MONDO:0003664"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare constitutional hemolytic anemia (obsolete MONDO:0015910)","termid":"MONDO:0015910"},{"relation_name":"excluded_subClassOf","term_name":"thrombotic microangiopathy","termid":"MONDO:0019737"},{"relation_name":"is_a","term_name":"blood coagulation disease","termid":"MONDO:0001531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemolytic-uremic syndrome","secondary_identifiers":["UMLS:C0019061","ICD9:283.11","SCTID:111407006","Orphanet:544458","DOID:12554","MEDGEN:42403","GARD:22233","NCIT:C75545","ICD10CM:D59.3","MESH:D006463"],"synonyms":[{"name":"HUS","type":"exact"},{"name":"acute renal failure, thrombocytopenia, and microangiopathic hemolytic anaemia associated with distorted erythrocytes ('burr cells')","type":"related"},{"name":"acute renal failure, thrombocytopenia, and microangiopathic hemolytic anemia associated with distorted erythrocytes ('burr cells')","type":"related"},{"name":"haemolytic-uraemic syndrome","type":"exact"},{"name":"hemolytic uremic syndrome","type":"exact"}],"termid":"MONDO:0001549","xrefs":{"Monarch":{"xref_id":"0001549"}}}


id: PBO:0064680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 16","termid":"PBO:0064680"}


id: PBO:0053022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LanC like glutathione S-transferase 2","termid":"PBO:0053022"}


id: FYPO:0000376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of apoptosis is decreased. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["GO:0006915","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased frequency of apoptosis","synonyms":[{"name":"apoptosis: decreased","type":"related"},{"name":"decreased apoptosis","type":"exact"},{"name":"decreased apoptotic frequency","type":"exact"},{"name":"reduced frequency of apoptosis","type":"exact"}],"termid":"FYPO:0000376"}


id: GO:0002285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a lymphocyte resulting from exposure to a specific antigen, mitogen, cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation involved in immune response","termid":"GO:0002366"},{"relation_name":"is_a","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte activation involved in immune response","synonyms":[{"name":"lymphocyte activation during immune response","type":"related"}],"termid":"GO:0002285"}


id: MONDO:0700092
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id: PBO:0075758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine repetitive matrix 1","termid":"PBO:0075758"}


id: MONDO:0012494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular microlithiasis","secondary_identifiers":["UMLS:C1864873","HP:0012215","MEDGEN:355854","MESH:C566478","OMIM:610441"],"synonyms":[{"name":"testicular microlithiasis","type":"exact"},{"name":"testicular microlithiasis (disease)","type":"exact"}],"termid":"MONDO:0012494","xrefs":{"Monarch":{"xref_id":"0012494"}}}


id: PBO:0079504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 2","termid":"PBO:0079504"}


id: PBO:0088147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar transporter; imports large neutral amino acids into the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters","termid":"PBO:0088147"}


id: GO:0099000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont's genome into the host cell through the host cell envelope via a contractile tail ejection system consisting of a baseplate, a central tube and an external contractile sheath. Upon binding to the host cell surface, the baseplate changes its conformation and triggers sheath contraction, driving the rigid internal tail tube through the cell envelope. Occurs in non-enveloped prokaryotic viruses.","definition_xrefs":["PMID:26283379","VZ:3950","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont genome ejection through host cell envelope","termid":"GO:0039678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont genome ejection through host cell envelope, contractile tail mechanism","synonyms":[{"name":"viral contractile tail ejection system","type":"exact"},{"name":"viral genome ejection through host cell envelope, contractile tail mechanism","type":"related"}],"termid":"GO:0099000"}


id: GO:0008220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The processes that cause necrosis, the death of tissues, in another organism.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete necrosis (obsolete GO:0008220)","synonyms":[{"name":"necrosis","type":"exact"}],"termid":"GO:0008220"}


id: GO:0140468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of reactions in which a signal is passed on to downstream proteins within the cell via HRI (also known as EIF2AK1), an intracellular protein kinase that is activated by stress signals, such as heme deficiency, oxidative stress, osmotic shock, mitochondrial dysfunction and heat shock.","definition_xrefs":["PMID:27629041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrated stress response signaling","termid":"GO:0140467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"HRI-mediated signaling","synonyms":[{"name":"EIF2AK1-mediated signaling","type":"exact"}],"termid":"GO:0140468"}


id: PBO:0089289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine synthetase family","termid":"PBO:0089289"}


id: MONDO:0060596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with dysmorphic facies and distal limb anomalies","secondary_identifiers":["OMIM:617755","UMLS:C4540327","DOID:0070514","GARD:18513","MEDGEN:1627464"],"synonyms":[{"name":"NEDDFL","type":"related"},{"name":"neurodevelopmental disorder with dysmorphic facies and distal limb anomalies","type":"exact"}],"termid":"MONDO:0060596","xrefs":{"Monarch":{"xref_id":"0060596"}}}


id: MONDO:0970961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare non-saccular limited dorsal myeloschisis, in which the stalk histology is characterized by skin tissue with dermo-epidermal epithelium in continuity with a subcutaneous fibrocollagenous tract containing various ectopic tissues.","definition_xrefs":["Orphanet:645310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-saccular limited dorsal myeloschisis","termid":"MONDO:0968989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"fibroneural non-saccular limited dorsal myeloschisis","secondary_identifiers":["UMLS:C5816724","MEDGEN:1853149"],"termid":"MONDO:0970961","xrefs":{"Monarch":{"xref_id":"0970961"}}}


id: GO:0034649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of a methyl group from monomethylated lysine at position 4 of the histone H3 protein.","definition_xrefs":["GOC:mah","PMID:16223729"],"gene_count":0,"genotype_count":0,"name":"obsolete histone demethylase activity (H3-monomethyl-K4 specific) (obsolete GO:0034649)","synonyms":[{"name":"histone demethylase activity (H3-K4-me1 specific)","type":"exact"}],"termid":"GO:0034649"}


id: PR:O14248
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tip elongation aberrant protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.02c","synonyms":[{"name":"Spom972h-tea3","type":"exact"},{"name":"cell polarity protein tea3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14248"}


id: MOD:00052
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-acetyl-L-cysteine.","definition_xrefs":["RESID:AA0043","PubMed:1500421","PubMed:11857757","PubMed:12175151","ChEBI:28939","PubMed:15350136","PubMed:14730666","PubMed:6725286","PubMed:11999733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated L-cysteine","termid":"MOD:00646"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"},{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408","MOD:00905"],"is_obsolete":false,"name":"N-acetyl-L-cysteine","synonyms":[{"name":"(2R)-2-acetamido-3-sulfanylpropanoic acid","type":"exact"},{"name":"2-acetylamino-3-mercaptopropanoic acid","type":"exact"},{"name":"2-acetylamino-3-sulfanylpropanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-sulfanylpropanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"MOD_RES N-acetylcysteine","type":"exact"},{"name":"N-acetyl-L-cysteine","type":"exact"},{"name":"N-acetylated cysteine","type":"exact"},{"name":"N-acetylcysteine","type":"exact"},{"name":"NAcCys","type":"exact"}],"termid":"MOD:00052"}


id: GO:0080180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-methylguanosine.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanosine-containing compound metabolic process","termid":"GO:1901068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2-methylguanosine metabolic process","termid":"GO:0080180"}


id: PBO:0070449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 6","termid":"PBO:0070449"}


id: PBO:0017977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructokinase pfk1","termid":"PBO:0017977"}


id: GO:1904846
data:
  {"annotated_genes":["SJAG_01373"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91289],"is_not":false,"summary":null,"term":"GO:1904846"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of bipolar cell polarity.","definition_xrefs":["GO_REF:0000058","PMID:26525038","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of establishment of bipolar cell polarity","termid":"GO:0061172"},{"relation_name":"negatively_regulates","term_name":"establishment of bipolar cell polarity","termid":"GO:0061171"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"negatively_regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"negative regulation of establishment of bipolar cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of establishment of bipolar cell polarity","type":"exact"},{"name":"down-regulation of establishment of bipolar cell polarity","type":"exact"},{"name":"downregulation of establishment of bipolar cell polarity","type":"exact"},{"name":"inhibition of establishment of bipolar cell polarity","type":"narrow"}],"termid":"GO:1904846","terms_by_termid":{"GO:1904846":null}}


id: PBO:0081868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 807, pseudogene","termid":"PBO:0081868"}


id: PBO:0086506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein involved in sphingolipid biosynthesis; not an essential gene; YOR365C has a paralog, FLC2, that arose from the whole genome duplication","termid":"PBO:0086506"}


id: PBO:0088416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit 11","termid":"PBO:0088416"}


id: PBO:0090256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn1/Mts4","termid":"PBO:0090256"}


id: PR:Q9HDT8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP20C8.01c gene.","definition_xrefs":["UniProtKB:Q9HDT8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0612 protein P20C8.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP20C8.01c","synonyms":[{"name":"Spom972h-SPCP20C8.01c","type":"exact"}],"termid":"PR:Q9HDT8"}


id: PBO:0083511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF DES3/YOR264W","termid":"PBO:0083511"}


id: PBO:0056743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 1, tRNA methylguanosine","termid":"PBO:0056743"}


id: GO:0102949
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isoorientin + an L-rhamonsylated rhamnosyl acceptor = isoorientin 2'-O-rhamnoside + a non rhamnosylated rhamnosyl acceptor.","definition_xrefs":["GOC:pz","PMID:15220389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,2-rhamnosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9082"],"termid":"GO:0102949"}


id: MONDO:0007472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinal drusen characterized by yellow-white deposits (drusen) that accumulate beneath the retinal pigment epithelium on Bruch membrane and that has material basis in mutations in the CFH gene on chromosome 1q31.3.","definition_xrefs":["PMID:5448127","DOID:0060746","PMID:18252232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal dystrophies primarily involving Bruch's membrane","termid":"MONDO:0001666"},{"relation_name":"is_a","term_name":"retinal drusen","termid":"MONDO:0006949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"basal laminar drusen","secondary_identifiers":["OMIM:126700","MEDGEN:152676","ICD10CM:H35.5","MESH:C563034","UMLS:C0730295","GARD:15060"],"synonyms":[{"name":"basal laminar drusen","type":"exact"},{"name":"cuticular drusen","type":"exact"},{"name":"drusen of Bruch membrane","type":"exact"},{"name":"drusen, cuticular","type":"related"},{"name":"drusen, early adult-onset, grouped","type":"related"},{"name":"early adult-onset grouped drusen","type":"exact"}],"termid":"MONDO:0007472","xrefs":{"Monarch":{"xref_id":"0007472"}}}


id: PBO:0072358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 44","termid":"PBO:0072358"}


id: PBO:0050771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIV-1 Tat specific factor 1 pseudogene 1","termid":"PBO:0050771"}


id: PBO:0054692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2101","termid":"PBO:0054692"}


id: PBO:0070067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 24, pseudogene","termid":"PBO:0070067"}


id: PBO:0038333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_exposure_stimulus","termid":"PBO:0038333"}


id: MONDO:0011302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 10q25.","definition_xrefs":["PMID:9788970","DOID:0110754","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 17","secondary_identifiers":["OMIM:603266","MESH:C566395","UMLS:C1864068","MEDGEN:351036"],"synonyms":[{"name":"IDDM17","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 17","type":"related"},{"name":"insulin-dependent diabetes mellitus 17","type":"exact"}],"termid":"MONDO:0011302","xrefs":{"Monarch":{"xref_id":"0011302"}}}


id: MONDO:0007058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A skeletal dysplasia characterized by fusion of the carpal and tarsal bones, with complex anomalies of the fingers and toes (preaxial polydactyly of the hands and/or feet, syndactyly of fingers and toes, hypoplasia and dysgenesis of metatarsal bones).","definition_xrefs":["Orphanet:957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acropectorovertebral dysplasia","secondary_identifiers":["GARD:512","MEDGEN:400262","MESH:C566319","UMLS:C1863307","icd11.foundation:1013313909","OMIM:102510","SCTID:720457000"],"synonyms":[{"name":"ACRPV","type":"related"},{"name":"Acropectorovertebral dysplasia","type":"exact"},{"name":"Acropectorovertebral dysplasia F form","type":"related"},{"name":"F syndrome","type":"exact"}],"termid":"MONDO:0007058","xrefs":{"Monarch":{"xref_id":"0007058"}}}


id: PBO:0031494
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_filament_organization_during_vegetative_growth","termid":"PBO:0031494"}


id: PBO:0050856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interactor of little elongation complex ELL subunit 2 pseudogene 1","termid":"PBO:0050856"}


id: GO:0016840
data:
  {"annotated_genes":["SJAG_02850","SJAG_01461","SJAG_00903","SJAG_00283","SJAG_00830","SJAG_04827","SJAG_05287"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070626"},{"annotations":[70611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004056"},{"annotations":[79280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008721"},{"annotations":[76981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061928"},{"annotations":[77149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004018"},{"annotations":[63941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036381"},{"annotations":[77834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004794"},{"annotations":[74700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050385"}]},"cv_name":"molecular_function","definition":"Catalysis of the release of ammonia or one of its derivatives, with the formation of a double bond or ring. Enzymes with this activity may catalyze the actual elimination of the ammonia, amine or amide, e.g. CH-CH(-NH-R) = C=CH- + NH2-R. Others, however, catalyze elimination of another component, e.g. water, which is followed by spontaneous reactions that lead to breakage of the C-N bond, e.g. L-serine ammonia-lyase (EC:4.3.1.17), so that the overall reaction is C(-OH)-CH(-NH2) = CH2-CO- + NH3, i.e. an elimination with rearrangement. The sub-subclasses of EC:4.3 are the ammonia-lyases (EC:4.3.1), lyases acting on amides, amidines, etc. (EC:4.3.2), the amine-lyases (EC:4.3.3), and other carbon-nitrogen lyases (EC:4.3.99).","definition_xrefs":["EC:4.3.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00283":null,"SJAG_00830":null,"SJAG_00903":null,"SJAG_01461":null,"SJAG_02850":null,"SJAG_04827":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carbon-nitrogen lyase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"synonyms":[{"name":"other carbon-nitrogen lyase activity","type":"narrow"}],"termid":"GO:0016840","terms_by_termid":{"GO:0004018":null,"GO:0004056":null,"GO:0004794":null,"GO:0008721":null,"GO:0036381":null,"GO:0050385":null,"GO:0061928":null,"GO:0070626":null}}


id: FYPO:0001011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells do not contain filamentous actin structures, such as cortical patches or dots, or rings.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"filamentous actin absent","synonyms":[{"name":"F-actin absent","type":"exact"},{"name":"actin filaments absent","type":"exact"},{"name":"filamentous actin absent during mitotic cell cycle","type":"related"},{"name":"filamentous actin absent during vegetative growth","type":"exact"}],"termid":"FYPO:0001011"}


id: PBO:0119630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GJD4 antisense RNA 1","termid":"PBO:0119630"}


id: PBO:0051009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily DCC subclass member 4","termid":"PBO:0051009"}


id: GO:0044430
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the cytoskeleton, a cellular scaffolding or skeleton that maintains cell shape, enables some cell motion (using structures such as flagella and cilia), and plays important roles in both intra-cellular transport (e.g. the movement of vesicles and organelles) and cellular division. Includes constituent parts of intermediate filaments, microfilaments, microtubules, and the microtrabecular lattice.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoskeletal part (obsolete GO:0044430)","secondary_identifiers":["NIF_Subcellular:sao1635329413"],"synonyms":[{"name":"cytoskeletal element","type":"exact"},{"name":"cytoskeleton component","type":"exact"}],"termid":"GO:0044430"}


id: GO:0060732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of inositol phosphate biosynthesis. Inositol phosphate biosynthetic processes are the chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inositol phosphate biosynthetic process","termid":"GO:0010919"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of inositol phosphate biosynthetic process","termid":"GO:0060732"}


id: PBO:0072141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 18","termid":"PBO:0072141"}


id: PBO:0083807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that interacts with proteasome components; has a potential role in proteasome substrate specificity; also copurifies with 66S pre-ribosomal particles","termid":"PBO:0083807"}


id: PBO:0055617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3056","termid":"PBO:0055617"}


id: PBO:0060499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 2","termid":"PBO:0060499"}


id: PBO:0086523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; YBR144C is not an essential gene","termid":"PBO:0086523"}


id: PBO:0086030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; YLL033W is not an essential gene but mutant is defective in spore formation; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0086030"}


id: MONDO:0020260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myasthenic syndrome with eye involvement (obsolete MONDO:0020260)","secondary_identifiers":["Orphanet:98690"],"termid":"MONDO:0020260","xrefs":{"Monarch":{"xref_id":"0020260"}}}


id: GO:0032740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of any member of the interleukin-17 family of cytokines.","definition_xrefs":["GOC:add","GOC:mah","PMID:16482511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-17 production","termid":"GO:0032660"},{"relation_name":"positively_regulates","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-17 production","secondary_identifiers":["GO:0045380","GO:1905078"],"synonyms":[{"name":"activation of interleukin-17 production","type":"narrow"},{"name":"positive regulation of CTLA-8 production","type":"exact"},{"name":"positive regulation of Cytotoxic T-lymphocyte-associated antigen 8 production","type":"exact"},{"name":"positive regulation of IL-17 production","type":"exact"},{"name":"positive regulation of interleukin-17 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-17 secretion","type":"narrow"},{"name":"stimulation of interleukin-17 production","type":"narrow"},{"name":"up regulation of interleukin-17 production","type":"exact"},{"name":"up-regulation of interleukin-17 production","type":"exact"},{"name":"upregulation of interleukin-17 production","type":"exact"}],"termid":"GO:0032740"}


id: GO:1990469
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex found in Drosophila consisting of the gene products of cuff, del and rhi. It regulates the licensing of transcription of dual-strand PIWI interacting RNA (piRNA) source loci by binding to dual-strand-cluster chromatin, probably via the H3K9me3-binding activity of Rhi. Rhi binding brings the putative termination cofactor Cuff in close proximity to the nascent piRNA precursor transcript which it appears to protect from degradation.","definition_xrefs":["GOC:bhm","PMID:24906153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"PET complex","termid":"GO:1990923"},{"relation_name":"part_of","term_name":"germ cell nucleus","termid":"GO:0043073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"Rhino-Deadlock-Cutoff Complex","synonyms":[{"name":"RDC complex","type":"exact"},{"name":"rhi-del-cuff complex","type":"exact"}],"termid":"GO:1990469"}


id: GO:0090427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts the inactive process of meiosis.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic nuclear division","termid":"GO:0045836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"activation of meiosis","termid":"GO:0090427"}


id: GO:0141053
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin to a histone H2A substrate.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone ubiquitin ligase activity","termid":"GO:0140852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0004842","GO:0016746","GO:0140096","GO:0019787","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"histone H2A ubiquitin ligase activity","termid":"GO:0141053"}


id: MONDO:0008034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Becker muscular dystrophy","termid":"MONDO:0010311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, pseudohypertrophic, with Internalized capillaries","secondary_identifiers":["OMIM:159050","MEDGEN:320399","GARD:15089","UMLS:C1834652","MESH:C563554"],"synonyms":[{"name":"muscular dystrophy, pseudohypertrophic, with Internalized capillaries","type":"exact"}],"termid":"MONDO:0008034","xrefs":{"Monarch":{"xref_id":"0008034"}}}


id: MONDO:0014389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, glycogen storage disorder characterized by polyglucosan accumulation in various tissues, manifesting with progressive proximal muscle weakness in the lower limbs and rapidly progressive, usually dilated, cardiomyopathy. Hepatic involvement and growth retardation may be associated. Early-onset immunodeficiency and autoinflammation, presenting with recurrent bacterial infections, have also been reported.","definition_xrefs":["Orphanet:397937"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuromuscular disease with dilated cardiomyopathy (obsolete MONDO:0016334)","termid":"MONDO:0016334"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neurometabolic disease (obsolete MONDO:0019058)","termid":"MONDO:0019058"},{"relation_name":"is_a","term_name":"polyglucosan body myopathy","termid":"MONDO:0000192"},{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0005336"],"is_obsolete":false,"name":"polyglucosan body myopathy 1 with or without immunodeficiency","secondary_identifiers":["MEDGEN:863042","UMLS:C4014605","NANDO:2200766","GARD:17643","OMIM:615895"],"synonyms":[{"name":"PGBM1","type":"exact"},{"name":"polyglucosan body myopathy 1 with or without immunodeficiency","type":"exact"},{"name":"polyglucosan body myopathy type 1","type":"exact"},{"name":"polyglucosan body myopathy, early-onset, with or without immunodeficiency","type":"exact"}],"termid":"MONDO:0014389","xrefs":{"Monarch":{"xref_id":"0014389"}}}


id: MONDO:1011670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida with raduschisis, non-human animal","secondary_identifiers":["OMIA:000936"],"termid":"MONDO:1011670","xrefs":{"Monarch":{"xref_id":"1011670"}}}


id: PBO:0042649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y like","termid":"PBO:0042649"}


id: PBO:0003006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacid dehydrogenase (predicted)","termid":"PBO:0003006"}


id: GO:0060622
data:
  {"annotated_genes":["SJAG_04771","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92750,87839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of ascospore wall beta-glucan biosynthetic process, the chemical reactions and pathways resulting in the formation of beta-glucans, compounds composed of glucose residues linked by beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of fungal-type cell wall beta-glucan biosynthetic process","termid":"GO:0090093"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ascospore wall beta-glucan biosynthetic process","termid":"GO:0034412"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0071554","GO:0007049","GO:0005975"],"is_obsolete":false,"name":"regulation of ascospore wall beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060622","terms_by_termid":{"GO:0140748":null}}


id: MONDO:0004786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cholangitis that is persistent and long-standing.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholangitis","termid":"MONDO:0004789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"chronic cholangitis","secondary_identifiers":["SCTID:71912000","UMLS:C0267918","NCIT:C35335","MEDGEN:82765","DOID:9439"],"synonyms":[{"name":"cholangitis, chronic","type":"exact"}],"termid":"MONDO:0004786","xrefs":{"Monarch":{"xref_id":"0004786"}}}


id: PBO:0060507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 6, pseudogene","termid":"PBO:0060507"}


id: PBO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin","termid":"PBO:0002496"}


id: PBO:0088355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp21","termid":"PBO:0088355"}


id: GO:0033385
data:
  {"annotated_genes":["SJAG_00580","SJAG_03352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109852,99931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033386"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving geranylgeranyl diphosphate, a polyprenol compound involved in the biosynthesis of a variety of terpenoids including chlorophylls, carotenoids, tocopherols, plastoquinones, and the plant hormones gibberellins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"geranylgeranyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"geranylgeranyl diphosphate metabolism","type":"exact"},{"name":"geranylgeranyldiphosphate metabolic process","type":"exact"}],"termid":"GO:0033385","terms_by_termid":{"GO:0033386":null}}


id: GO:0030857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of epithelial cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"negatively_regulates","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial cell differentiation","synonyms":[{"name":"down regulation of epithelial cell differentiation","type":"exact"},{"name":"down-regulation of epithelial cell differentiation","type":"exact"},{"name":"downregulation of epithelial cell differentiation","type":"exact"},{"name":"inhibition of epithelial cell differentiation","type":"narrow"}],"termid":"GO:0030857"}


id: PBO:0044309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase 4","termid":"PBO:0044309"}


id: GO:0003863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-[(R)-lipoyl]-L-lysyl-[dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] + 3-methyl-2-oxobutanoate + H+ = N(6)-[(R)-S(8)-2-methylpropanoyldihydrolipoyl]-L-lysyl-[dihydrolipoyllysine-residue (2-methylpropanoyl)transferase] + CO2. Also acts on 4-methyl-2-oxopentanoate and (S)-3-methyl-2-oxopentanoate, so that it acts on the 2-oxo acids that derive from the action of transaminases on valine, leucine and isoleucine.","definition_xrefs":["EC:1.2.4.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor","termid":"GO:0016624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"branched-chain 2-oxo acid dehydrogenase activity","secondary_identifiers":["MetaCyc:1.2.4.4-RXN","GO:0003826"],"synonyms":[{"name":"2-oxoisocaproate dehydrogenase activity","type":"related"},{"name":"2-oxoisovalerate (lipoate) dehydrogenase activity","type":"related"},{"name":"3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity","type":"narrow"},{"name":"3-methyl-2-oxobutanoate dehydrogenase (lipoamide) activity","type":"related"},{"name":"3-methyl-2-oxobutanoate:dihydrolipoyllysine-residue (2-methylpropanoyl)transferase-lipoyllysine 2-oxidoreductase (decarboxylating, acceptor-2-methylpropanoylating)","type":"related"},{"name":"3-methyl-2-oxobutanoate:lipoamide oxidoreductase (decarboxylating and acceptor-2-methylpropanoylating) activity","type":"related"},{"name":"BCKDH activity","type":"related"},{"name":"BCOAD activity","type":"related"},{"name":"alpha-keto-alpha-methylvalerate dehydrogenase activity","type":"related"},{"name":"alpha-ketoacid dehydrogenase activity","type":"narrow"},{"name":"alpha-ketoisocaproate dehydrogenase activity","type":"related"},{"name":"alpha-ketoisocaproic dehydrogenase activity","type":"related"},{"name":"alpha-ketoisocaproic-alpha-keto-alpha-methylvaleric dehydrogenase activity","type":"related"},{"name":"alpha-ketoisovalerate dehydrogenase activity","type":"related"},{"name":"alpha-oxoisocaproate dehydrogenase activity","type":"related"},{"name":"branched chain keto acid dehydrogenase activity","type":"related"},{"name":"branched-chain (-2-oxoacid) dehydrogenase (BCD) activity","type":"related"},{"name":"branched-chain 2-keto acid dehydrogenase activity","type":"related"},{"name":"branched-chain alpha-keto acid dehydrogenase activity","type":"related"},{"name":"branched-chain alpha-oxo acid dehydrogenase activity","type":"related"},{"name":"branched-chain keto acid dehydrogenase activity","type":"related"},{"name":"branched-chain ketoacid dehydrogenase activity","type":"related"},{"name":"dehydrogenase, 2-oxoisovalerate (lipoate) activity","type":"related"},{"name":"dehydrogenase, branched chain alpha-keto acid activity","type":"related"}],"termid":"GO:0003863"}


id: PBO:0045243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C22","termid":"PBO:0045243"}


id: GO:1904679
data:
  {"annotated_genes":["SJAG_04506","SJAG_03595"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72460,73397],"is_not":false,"summary":null,"term":"GO:1904679"}]},"cv_name":"biological_process","definition":"The directed movement of myo-inositol from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:9560432","GOC:TermGenie","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"myo-inositol transport","termid":"GO:0015798"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"myo-inositol import across plasma membrane","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0097357"],"synonyms":[{"name":"myo-inositol import into cell","type":"exact"}],"termid":"GO:1904679","terms_by_termid":{"GO:1904679":null}}


id: GO:1902180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of verruculogen.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:23649274"],"gene_count":0,"genotype_count":0,"name":"obsolete verruculogen catabolic process (obsolete GO:1902180)","synonyms":[{"name":"verruculogen breakdown","type":"exact"},{"name":"verruculogen catabolism","type":"exact"},{"name":"verruculogen degradation","type":"exact"}],"termid":"GO:1902180"}


id: MOD:00105
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to L-serine amide.","definition_xrefs":["PubMed:743209","RESID:AA0096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-serine amide","synonyms":[{"name":"(2S)-2-amino-3-hydroxypropanamide","type":"exact"},{"name":"L-serine amide","type":"exact"},{"name":"MOD_RES Serine amide","type":"exact"},{"name":"SerN","type":"exact"},{"name":"amidated L-serine","type":"exact"},{"name":"serinamide","type":"exact"}],"termid":"MOD:00105"}


id: MONDO:0001275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal meningioma isa rare type of spinal cord cancer. The spinal cord is part of the central nervous system. This tumor often affects middle-aged women. Tumors of the spinal cord can be either primary or arise from other primary tumors (metastatic), and are typically slow growing. The initial signs and symptoms include headacheand recent onset of seizures. Other features are motor deficits, sensory deficits, pain, and sphincter dysfunction. The thoracic spine (middle back) is the most common site, followed by the cervical spine (neck). These tumors are rarely seen in the lumbar region (lower back). T he only proven risk factor in the development of meningioma is exposure to ionizing radiation. Also, patients with neurofibromatosis type 2 are at increased risk of developing meningioma. Surgery is the treatment of choice and complete tumor removal is reached in the vast majority of patients. The prognosis after surgical resection is excellent.","direct_ancestors":[{"relation_name":"is_a","term_name":"intraspinal meningioma","termid":"MONDO:0001279"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal meningioma","secondary_identifiers":["DOID:1138","UMLS:C0347515","SCTID:189167009","GARD:10264","MEDGEN:87576","NCIT:C6935"],"synonyms":[{"name":"meningioma (disease) of spinal cord","type":"exact"},{"name":"meningioma of spinal cord","type":"exact"},{"name":"meningioma of the spinal cord","type":"exact"},{"name":"meningioma, spine","type":"related"},{"name":"spinal cord meningioma","type":"exact"},{"name":"spinal cord meningioma (disease)","type":"exact"}],"termid":"MONDO:0001275","xrefs":{"Monarch":{"xref_id":"0001275"}}}


id: MONDO:0003575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A high grade carcinoma characterized by the presence of comedo-type of tumor cell necrosis in which the necrotic areas are surrounded by a solid proliferation of malignant pleomorphic cells.","definition_xrefs":["NCIT:C4188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"comedocarcinoma","secondary_identifiers":["ICDO:8501/3","DOID:5670","UMLS:C0334370","MEDGEN:90773"],"synonyms":[{"name":"Comedocarcinoma","type":"exact"},{"name":"comedo carcinoma","type":"exact"}],"termid":"MONDO:0003575","xrefs":{"Monarch":{"xref_id":"0003575"}}}


id: GO:1903649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cytoplasmic transport.","definition_xrefs":["GOC:TermGenie","PMID:25049409","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cytoplasmic transport (obsolete GO:1903649)","synonyms":[{"name":"regulation of cytoplasmic streaming","type":"narrow"}],"termid":"GO:1903649"}


id: PBO:0069873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1160, pseudogene","termid":"PBO:0069873"}


id: PBO:0034580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_inositol_phosphate_phosphatase_activity","termid":"PBO:0034580"}


id: MONDO:0017237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy","termid":"MONDO:0015358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary sensorimotor neuropathy with hyperelastic skin","secondary_identifiers":["GARD:11010","MEDGEN:1678654","UMLS:C5190690","Orphanet:280598","icd11.foundation:691133799"],"termid":"MONDO:0017237","xrefs":{"Monarch":{"xref_id":"0017237"}}}


id: GO:0043873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin.","definition_xrefs":["PMID:6352705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pyruvate-flavodoxin oxidoreductase activity","secondary_identifiers":["MetaCyc:PYFLAVOXRE-RXN","RHEA:44140"],"synonyms":[{"name":"NifJ","type":"related"},{"name":"pyruvate:flavodoxin oxidoreductase activity","type":"exact"}],"termid":"GO:0043873"}


id: GO:0099513
data:
  {"annotated_genes":["SJAG_05220","SJAG_02566","SJAG_03073","SJAG_04887","SJAG_00655","SJAG_02286","SJAG_04745","SJAG_01993","SJAG_00113","SJAG_02045","SJAG_00332","SJAG_03264","SJAG_00594","SJAG_03540","SJAG_01196","SJAG_04841","SJAG_01297","SJAG_02695","SJAG_00930","SJAG_02040","SJAG_03145","SJAG_01546","SJAG_00918","SJAG_01330","SJAG_05266","SJAG_00773","SJAG_01837","SJAG_02761","SJAG_01775","SJAG_00851","SJAG_02336","SJAG_02651","SJAG_02624","SJAG_01224","SJAG_01613","SJAG_02509","SJAG_03088","SJAG_00723","SJAG_03052","SJAG_00140","SJAG_01215","SJAG_04387","SJAG_04003","SJAG_00030","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95615,109420,71912,76051,76963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005884"},{"annotations":[107571,104350,99537,107783,112504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000235"},{"annotations":[101762,108608,91701,98941,104220,99538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055028"},{"annotations":[95536,104084,97902],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"},{"annotations":[105215,91471,104885,113144,118535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005881"},{"annotations":[97597],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062194"},{"annotations":[89942,104222,114422,119049,100704,97300,102657],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904511"},{"annotations":[88071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990574"},{"annotations":[97093,119858,74189,68459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005874"},{"annotations":[99543,100707],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036449"},{"annotations":[104996,71001,119844,79798,80229,99545],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035371"},{"annotations":[91705,108614,79231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061673"},{"annotations":[97303],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905721"},{"annotations":[107863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990941"},{"annotations":[100709,101767,106676,119055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990498"},{"annotations":[118541,99548,107864,98945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990537"},{"annotations":[91708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005880"},{"annotations":[101770,95106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005827"},{"annotations":[97304,101771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905759"},{"annotations":[91710],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"},{"annotations":[100860,76112,76680,104036,63268,77392,90070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005876"}]},"cv_name":"cellular_component","definition":"A component of the cytoskeleton consisting of a homo or heteropolymeric fiber constructed from an indeterminate number of protein subunits.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00594":null,"SJAG_00655":null,"SJAG_00723":null,"SJAG_00773":null,"SJAG_00845":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01196":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01837":null,"SJAG_01993":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02509":null,"SJAG_02566":null,"SJAG_02624":null,"SJAG_02651":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_03052":null,"SJAG_03073":null,"SJAG_03088":null,"SJAG_03145":null,"SJAG_03264":null,"SJAG_03540":null,"SJAG_04003":null,"SJAG_04387":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04887":null,"SJAG_05220":null,"SJAG_05266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"polymeric cytoskeletal fiber","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21802294":null,"PMID:30726171":null},"termid":"GO:0099513","terms_by_termid":{"GO:0000235":null,"GO:0005827":null,"GO:0005874":null,"GO:0005876":null,"GO:0005880":null,"GO:0005881":null,"GO:0005884":null,"GO:0035371":null,"GO:0036449":null,"GO:0055028":null,"GO:0061673":null,"GO:0062194":null,"GO:1903754":null,"GO:1904511":null,"GO:1905721":null,"GO:1905759":null,"GO:1905760":null,"GO:1990498":null,"GO:1990537":null,"GO:1990574":null,"GO:1990941":null}}


id: PBO:0058598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6730","termid":"PBO:0058598"}


id: MONDO:0100562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild microcytic anemia caused by biallelic variation in the HBA2 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic alpha thalassemia spectrum","termid":"MONDO:0100565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"HBA2-related alpha thalassemia spectrum","synonyms":[{"name":"alpha-thalassemia trait","type":"related"}],"termid":"MONDO:0100562","xrefs":{"Monarch":{"xref_id":"0100562"}}}


id: MOD:02009
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-stearoyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-stearoylated residue","termid":"MOD:02010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"},{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01155","MOD:01875"],"is_obsolete":false,"name":"N6-stearoyl-L-lysine","termid":"MOD:02009"}


id: PR:O74172
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps2501 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S25-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.15","synonyms":[{"name":"S31-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps2501","type":"exact"}],"termid":"PR:O74172"}


id: GO:0045577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of B cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte differentiation","termid":"GO:0045619"},{"relation_name":"is_a","term_name":"regulation of B cell activation","termid":"GO:0050864"},{"relation_name":"regulates","term_name":"B cell differentiation","termid":"GO:0030183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell differentiation","synonyms":[{"name":"regulation of B cell development","type":"related"},{"name":"regulation of B lymphocyte differentiation","type":"exact"},{"name":"regulation of B-cell differentiation","type":"exact"},{"name":"regulation of B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045577"}


id: GO:1900837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fumigaclavine C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ergot alkaloid biosynthetic process","termid":"GO:1900822"},{"relation_name":"regulates","term_name":"fumigaclavine C biosynthetic process","termid":"GO:1900809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of fumigaclavine C biosynthetic process","synonyms":[{"name":"regulation of fumigaclavine C anabolism","type":"exact"},{"name":"regulation of fumigaclavine C biosynthesis","type":"exact"},{"name":"regulation of fumigaclavine C formation","type":"exact"},{"name":"regulation of fumigaclavine C synthesis","type":"exact"}],"termid":"GO:1900837"}


id: PBO:0111832
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C5HC2 type","termid":"PBO:0111832"}


id: GO:0009137
data:
  {"annotated_genes":["SJAG_04192","SJAG_06622","SJAG_03828","SJAG_04048","SJAG_05314","SJAG_02369","SJAG_04334","SJAG_01310","SJAG_02107","SJAG_02796","SJAG_03660","SJAG_02009","SJAG_03903","SJAG_02135","SJAG_02785","SJAG_00839","SJAG_00685","SJAG_02945","SJAG_00461","SJAG_03373","SJAG_06621","SJAG_04495","SJAG_00027","SJAG_00605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109760,103983,109763,106181,78197,94858,105811,109765,98324,105810,105812,109759,98595,95352,106182,109764,103726,109762,116738,109761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[76373,73415],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[70459],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine nucleoside diphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate catabolic process","termid":"GO:0009134"},{"relation_name":"is_a","term_name":"purine nucleoside diphosphate metabolic process","termid":"GO:0009135"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside diphosphate breakdown","type":"exact"},{"name":"purine nucleoside diphosphate catabolism","type":"exact"},{"name":"purine nucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009137","terms_by_termid":{"GO:0006110":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null}}


id: GO:0008961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the prospective N-terminal cysteine residue in an unmodified prolipoprotein.","definition_xrefs":["PMID:8051048","RHEA:56712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity","secondary_identifiers":["EC:2.5.1.145"],"termid":"GO:0008961"}


id: PBO:0066803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 102","termid":"PBO:0066803"}


id: PBO:0057806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3128","termid":"PBO:0057806"}


id: PBO:0083770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential, non-ATPase regulatory subunit of the 26S proteasome lid; required for the assembly and activity of the 26S proteasome; the human homolog (S9 protein) partially rescues Rpn6p depletion; protein abundance increases in response to DNA replication stress","termid":"PBO:0083770"}


id: GO:0075256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of teliospore formation, which is the formation of a thick-walled resting or over-wintering spore produced by the rust fungi (Uredinales) and smut fungi (Ustilaginales) in which karyogamy occurs.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"regulates","term_name":"teliospore formation","termid":"GO:0075255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of teliospore formation","termid":"GO:0075256"}


id: MONDO:0014573
data:
  {"annotated_genes":["SJAG_02349"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85777],"is_not":false,"summary":null,"term":"MONDO:0014573"}]},"cv_name":"mondo","definition":"Any Cole-Carpenter syndrome in which the cause of the disease is a mutation in the SEC24D gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cole-Carpenter syndrome","termid":"MONDO:0016085"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02349":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Cole-Carpenter syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225382","OMIM:616294","GARD:16077","MEDGEN:905199"],"synonyms":[{"name":"CLCRP2","type":"related"},{"name":"COLE-CARPENTER syndrome 2","type":"related"},{"name":"Cole-Carpenter syndrome 2","type":"exact"},{"name":"Cole-Carpenter syndrome caused by mutation in SEC24D","type":"exact"},{"name":"Cole-Carpenter syndrome type 2","type":"exact"},{"name":"SEC24D Cole-Carpenter syndrome","type":"exact"}],"termid":"MONDO:0014573","terms_by_termid":{"MONDO:0014573":null},"xrefs":{"Monarch":{"xref_id":"0014573"}}}


id: GO:0043582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sporangium over time, from its formation to the mature structure. A sporangium is a structure producing and containing spores.","definition_xrefs":["GOC:jl","Wikipedia:Sporagium"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporangium development","synonyms":[{"name":"sporangia development","type":"exact"}],"termid":"GO:0043582"}


id: PBO:0046221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 14","termid":"PBO:0046221"}


id: GO:1905824
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117067],"is_not":false,"summary":null,"term":"GO:1905824"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic sister chromatid arm separation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:als","PMID:18765790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid separation","termid":"GO:1901970"},{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid arm separation","termid":"GO:1905822"},{"relation_name":"positively_regulates","term_name":"mitotic sister chromatid arm separation","termid":"GO:1990891"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic sister chromatid arm separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic sister chromatid arm separation","type":"narrow"},{"name":"up regulation of mitotic sister chromatid arm separation","type":"exact"},{"name":"up-regulation of mitotic sister chromatid arm separation","type":"exact"},{"name":"upregulation of mitotic sister chromatid arm separation","type":"exact"}],"termid":"GO:1905824","terms_by_termid":{"GO:1905824":null}}


id: PBO:0057765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2054","termid":"PBO:0057765"}


id: PBO:0055547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2983","termid":"PBO:0055547"}


id: PATO:0002287
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elasticity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"elastic","termid":"PATO:0001171"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased elasticity","termid":"PATO:0002287"}


id: GO:0015011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an enzyme cofactor consisting of a tetrapyrrole structure containing nickel, such as the F-430 cofactor found in methyl-coenzyme M reductase.","definition_xrefs":["Wikipedia:Cofactor_F430","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"nickel-tetrapyrrole coenzyme metabolic process","synonyms":[{"name":"coenzyme F430 metabolic process","type":"narrow"},{"name":"nickel-tetrapyrrole coenzyme metabolism","type":"exact"}],"termid":"GO:0015011"}


id: PBO:0029124
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_saccharopine_dehydrogenase_activity","termid":"PBO:0029124"}


id: PBO:0002442
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.50","termid":"PBO:0002442"}


id: MONDO:0021667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pain disorder characterize by pain in the distribution of a nerve or nerves","definition_xrefs":["Wikipedia:Neuralgia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"},{"relation_name":"is_a","term_name":"neurological pain disorder","termid":"MONDO:0700057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuralgia","secondary_identifiers":["SCTID:16269008","EFO:0009430","MESH:D009437","MEDGEN:18010","UMLS:C0027796","ICD9:729.2"],"synonyms":[{"name":"neuralgia","type":"exact"},{"name":"pain, nerve","type":"related"},{"name":"pain, neuropathic","type":"related"},{"name":"paroxysmal nerve pain","type":"related"},{"name":"paroxysmal nerve pains","type":"related"}],"termid":"MONDO:0021667","xrefs":{"Monarch":{"xref_id":"0021667"}}}


id: GO:0099007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the presynaptic endosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:autophagy","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of endosome membrane","termid":"GO:0031313"},{"relation_name":"part_of","term_name":"presynaptic endosome membrane","termid":"GO:0098954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005768","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of presynaptic endosome membrane","termid":"GO:0099007"}


id: MONDO:0001568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an impairment in the development of an individual's expressive and receptive language capabilities which is in contrast to his/her nonverbal intellect. The impairment may be acquired (i.e., due to a brain lesion or head trauma) or developmental (i.e., no known neurological insult).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"language disorder","termid":"MONDO:0004750"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed receptive-expressive language disorder","secondary_identifiers":["SCTID:25766007","NCIT:C92563","DOID:12685","MEDGEN:452301","UMLS:C0236827","ICD10CM:F80.2","ICD9:315.32"],"termid":"MONDO:0001568","xrefs":{"Monarch":{"xref_id":"0001568"}}}


id: PBO:0074740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 100","termid":"PBO:0074740"}


id: PBO:0064562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 and ZP3 fusion","termid":"PBO:0064562"}


id: MONDO:0054845
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 66","secondary_identifiers":["OMIM:618067","DOID:0080446","MEDGEN:1648486","UMLS:C4748070"],"synonyms":[{"name":"DEE66","type":"exact"},{"name":"EIEE66","type":"exact"},{"name":"developmental and epileptic encephalopathy 66","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 66","type":"exact"}],"termid":"MONDO:0054845","xrefs":{"Monarch":{"xref_id":"0054845"}}}


id: PBO:0063533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and pleckstrin homology domains 1, pseudogene","termid":"PBO:0063533"}


id: GO:0018998
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete metaxin (obsolete GO:0018998)","synonyms":[{"name":"metaxin","type":"exact"}],"termid":"GO:0018998"}


id: GO:0046952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ketone bodies, any one of the three substances: acetoacetate, D-3-hydroxybutyrate (beta-hydroxybutyrate) or acetone. Ketone bodies can be used as an energy source as an alternative to glucose. Utilization of ketone bodies in peripheral tissues involves conversion of acetoacetate to acetoacetyl-CoA, which is then converted to two molecules of acetyl-CoA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"},{"relation_name":"is_a","term_name":"ketone body metabolic process","termid":"GO:1902224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"ketone body catabolic process","secondary_identifiers":["Reactome:R-HSA-77108","MetaCyc:PWY66-368"],"synonyms":[{"name":"ketolysis","type":"exact"},{"name":"ketone body breakdown","type":"exact"},{"name":"ketone body catabolism","type":"exact"},{"name":"ketone body degradation","type":"exact"},{"name":"utilization of ketone bodies","type":"exact"}],"termid":"GO:0046952"}


id: SO:0000635
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript that donates the spliced leader to other mRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mini_exon_donor_RNA","synonyms":[{"name":"mini exon donor RNA","type":"exact"},{"name":"mini-exon donor RNA","type":"exact"}],"termid":"SO:0000635"}


id: GO:0035660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like 4 receptor, where the MyD88 adaptor molecule mediates transduction of the signal. Toll-like 4 receptors bind bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["PMID:18304834","GOC:BHF","PMID:20385024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MyD88-dependent toll-like receptor signaling pathway","termid":"GO:0002755"},{"relation_name":"is_a","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"MyD88-dependent toll-like receptor 4 signaling pathway","synonyms":[{"name":"MyD88-dependent TLR4 signaling pathway","type":"exact"},{"name":"MyD88-dependent toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0035660"}


id: PBO:0051793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing J","termid":"PBO:0051793"}


id: MONDO:0017088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated amyelia","secondary_identifiers":["GARD:20976","icd11.foundation:1787577133","Orphanet:268868"],"termid":"MONDO:0017088","xrefs":{"Monarch":{"xref_id":"0017088"}}}


id: PBO:0069677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 954, pseudogene","termid":"PBO:0069677"}


id: PBO:0002142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex endoribonuclease subunit Ysh1","termid":"PBO:0002142"}


id: FYPO:0004458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more DNA replication RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells) when the cell is subject to nitrogen starvation. DNA replication RNAs are transcribed from genes whose products are involved in DNA replication.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during nitrogen starvation","termid":"FYPO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased level of DNA replication gene mRNA during nitrogen starvation","synonyms":[{"name":"increased DNA replication gene mRNA accumulation during nitrogen starvation","type":"related"},{"name":"increased level of DNA replication gene RNA during nitrogen starvation","type":"exact"},{"name":"increased level of DNA replication gene mRNA during nitrogen depletion","type":"exact"},{"name":"increased level of DNA replication gene mRNA during nitrogen deprivation","type":"exact"},{"name":"increased level of DNA replication gene transcripts nitrogen starvation","type":"exact"}],"termid":"FYPO:0004458"}


id: PBO:0040854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC1S6 pseudogene 1","termid":"PBO:0040854"}


id: PBO:0031815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_autophagy","termid":"PBO:0031815"}


id: GO:0071424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a cytidine in rRNA + S-adenosyl-L-methionine = an N(4)-methylcytidine in rRNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:62520","PMID:19965768","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (cytosine) methyltransferase activity","termid":"GO:0016434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"rRNA (cytosine-N4-)-methyltransferase activity","termid":"GO:0071424"}


id: PBO:0055381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2811","termid":"PBO:0055381"}


id: MONDO:0013560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Hermansky-Pudlak syndrome in which the cause of the disease is a mutation in the BLOC1S3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hermansky-Pudlak syndrome","termid":"MONDO:0019312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"Hermansky-Pudlak syndrome 8","secondary_identifiers":["DOID:0060546","OMIM:614077","Orphanet:231537","MEDGEN:854728","UMLS:C3888026","ICD10CM:E70.3","GARD:18337"],"synonyms":[{"name":"BLOC1S3 Hermansky-Pudlak syndrome","type":"exact"},{"name":"HPS8","type":"exact"},{"name":"Hermansky-Pudlak syndrome 8","type":"exact"},{"name":"Hermansky-Pudlak syndrome caused by mutation in BLOC1S3","type":"exact"},{"name":"Hermansky-Pudlak syndrome type 8","type":"exact"}],"termid":"MONDO:0013560","xrefs":{"Monarch":{"xref_id":"0013560"}}}


id: GO:0033212
data:
  {"annotated_genes":["SJAG_04743","SJAG_02735","SJAG_04675","SJAG_02968","SJAG_02834","SJAG_03667","SJAG_04677"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104128],"is_not":false,"summary":null,"term":"GO:0033212"},{"annotations":[113596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[78012,92779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[62068,62172,69565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"The directed movement of iron ions from outside of a cell into the cytoplasmic compartment. This may occur via transport across the plasma membrane or via endocytosis.","definition_xrefs":["PMID:18622392","PMID:23192658","Wikipedia:Human_iron_metabolism"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transport","termid":"GO:0006826"},{"relation_name":"is_a","term_name":"intracellular iron ion homeostasis","termid":"GO:0006879"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02735":null,"SJAG_02834":null,"SJAG_02968":null,"SJAG_03667":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0006810","GO:0098771","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"iron import into cell","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0070627"],"synonyms":[{"name":"ferrous ion import","type":"narrow"},{"name":"ferrous iron import","type":"narrow"},{"name":"ferrous iron uptake","type":"narrow"},{"name":"iron assimilation","type":"related"}],"termid":"GO:0033212","terms_by_termid":{"GO:0033212":null,"GO:0033214":null,"GO:0033215":null,"GO:0098711":null}}


id: PBO:0028357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphatase_activity","termid":"PBO:0028357"}


id: PBO:0060537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase domain containing 1","termid":"PBO:0060537"}


id: GO:0010813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of neuropeptides. Neuropeptides are signaling peptides that travel across a synaptic junction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide catabolic process","termid":"GO:0043171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuropeptide catabolic process","termid":"GO:0010813"}


id: MONDO:0000417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete early onset absence epilepsy (obsolete MONDO:0000417)","termid":"MONDO:0000417","xrefs":{"Monarch":{"xref_id":"0000417"}}}


id: PBO:0052718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 10","termid":"PBO:0052718"}


id: FYPO:0003357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to filipin. Cells stop growing (and may die) at a concentration of filipin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to filipin","synonyms":[{"name":"hypersensitive to filipin","type":"exact"},{"name":"sensitive to filipin during mitotic cell cycle","type":"related"},{"name":"sensitive to filipin during vegetative growth","type":"exact"},{"name":"sensitivity to chemicals interfering with lipids","type":"broad"}],"termid":"FYPO:0003357"}


id: MONDO:0014992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lissencephaly (disease) in which the cause of the disease is a mutation in the TMTC3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly 8","secondary_identifiers":["DOID:0112233","MEDGEN:934613","UMLS:C4310646","OMIM:617255"],"synonyms":[{"name":"LIS8","type":"exact"},{"name":"TMTC3 lissencephaly (disease)","type":"exact"},{"name":"lissencephaly (disease) caused by mutation in TMTC3","type":"exact"},{"name":"lissencephaly 8","type":"exact"},{"name":"lissencephaly 8; LIS8","type":"exact"},{"name":"lissencephaly type 8","type":"exact"}],"termid":"MONDO:0014992","xrefs":{"Monarch":{"xref_id":"0014992"}}}


id: MONDO:0005242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An accumulation of pus in a body cavity, usually the pleural space.","definition_xrefs":["NCIT:C34572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"empyema","secondary_identifiers":["UMLS:C0014009","ICD9:510","SCTID:312682007","MESH:D004653","EFO:0003097","MEDGEN:8597"],"synonyms":[{"name":"collection of pus","type":"related"}],"termid":"MONDO:0005242","xrefs":{"Monarch":{"xref_id":"0005242"}}}


id: PBO:0056509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallo-beta-lactamase domain containing 1","termid":"PBO:0056509"}


id: PBO:0076250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUZ12 pseudogene 1","termid":"PBO:0076250"}


id: PBO:0052135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 2","termid":"PBO:0052135"}


id: GO:0070920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of regulatory non-coding RNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene silencing by regulatory ncRNA","termid":"GO:0060966"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of regulatory ncRNA processing","synonyms":[{"name":"regulation of gene silencing by RNA, production of guide RNA","type":"exact"},{"name":"regulation of gene silencing by RNA, production of small RNA","type":"exact"},{"name":"regulation of production of small RNA involved in gene silencing by RNA","type":"narrow"}],"termid":"GO:0070920"}


id: MONDO:0002593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thymic carcinoma (obsolete MONDO:0002593)","termid":"MONDO:0002593","xrefs":{"Monarch":{"xref_id":"0002593"}}}


id: PBO:0003179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2/M B-type cyclin Cdc13","termid":"PBO:0003179"}


id: MONDO:0007416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic tubulointerstitial nephropathy that affects people in certain rural areas along the Danube river in the Balkans. It leads to end-stage renal disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial nephritis","termid":"MONDO:0001085"},{"relation_name":"is_a","term_name":"hereditary nephritis","termid":"MONDO:0005334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Balkan nephropathy","secondary_identifiers":["MEDGEN:495","UMLS:C0004698","NCIT:C123025","icd11.foundation:18497836","ICD10CM:N15.0","OMIM:124100","SCTID:26121002","MESH:D001449","ICD9:583.89","DOID:3052","EFO:0007164"],"synonyms":[{"name":"AAN","type":"related"},{"name":"BEN","type":"related"},{"name":"Balkan endemic nephropathy","type":"exact"},{"name":"Chinese herb endemic nephropathy","type":"exact"},{"name":"DEFN","type":"related"},{"name":"Danubian endemic familial nephropathy","type":"exact"},{"name":"aristolochic acid nephropathy","type":"exact"},{"name":"endemic nephropathy","type":"exact"},{"name":"nephropathia epidemica","type":"related"}],"termid":"MONDO:0007416","xrefs":{"Monarch":{"xref_id":"0007416"}}}


id: PBO:0064582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member C","termid":"PBO:0064582"}


id: PBO:0072091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 22","termid":"PBO:0072091"}


id: PR:000037083
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein complex composed of two subunits of Schizosaccharomyces pombe tropomyosin cdc8.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropomyosin cdc8","termid":"PR:000028197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin cdc8 homodimer (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC27F1.02c","synonyms":[{"name":"Spom-(cdc8)*2","type":"exact"}],"termid":"PR:000037083"}


id: MONDO:0957318
data:
  {"annotated_genes":["SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86827,86828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020722"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephrolithiasis","termid":"MONDO:0008171"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrolithiasis, calcium oxalate","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:167030","UMLS:C1833683","MEDGEN:318935"],"termid":"MONDO:0957318","terms_by_termid":{"MONDO:0020722":null},"xrefs":{"Monarch":{"xref_id":"0957318"}}}


id: PBO:0064374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMPCA pseudogene 1","termid":"PBO:0064374"}


id: PBO:0049486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1-8 pseudogene 2","termid":"PBO:0049486"}


id: GO:0100050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates mating type switching.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mating type switching by transcription from RNA polymerase II promoter (obsolete GO:0100050)","termid":"GO:0100050"}


id: PBO:0045610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 21 (pseudogene)","termid":"PBO:0045610"}


id: PBO:0110387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL antisense RNA 1","termid":"PBO:0110387"}


id: PBO:0075755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sushi repeat containing protein X-linked 2","termid":"PBO:0075755"}


id: MONDO:0017941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by the Chikungunya virus, which is transmitted by mosquitoes; it is characterized by fever and severe arthralgia.","definition_xrefs":["NCIT:C128422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alphavirus infectious disease","termid":"MONDO:0005643"},{"relation_name":"is_a","term_name":"arbovirus fever","termid":"MONDO:0018093"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chikungunya","secondary_identifiers":["icd11.foundation:900389391","GARD:6038","MEDGEN:3362","Orphanet:324625","NORD:924","SCTID:111864006","DOID:0050012","UMLS:C0008055","MESH:D065632"],"synonyms":[{"name":"CHIK","type":"related"},{"name":"CHIKV infection","type":"related"},{"name":"CK","type":"related"},{"name":"Chikungunya fever","type":"exact"},{"name":"Chikungunya virus caused disease or disorder","type":"exact"},{"name":"Chikungunya virus disease or disorder","type":"exact"},{"name":"Chikungunya virus infection","type":"related"},{"name":"Chikungunya virus infectious disease","type":"exact"},{"name":"arbovirus A Chikungunya type","type":"related"}],"termid":"MONDO:0017941","xrefs":{"Monarch":{"xref_id":"0017941"}}}


id: GO:0043555
data:
  {"annotated_genes":["SJAG_02592","SJAG_04383","SJAG_03869","SJAG_00786","SJAG_00169","SJAG_02072","SJAG_01942","SJAG_04873","SJAG_00690"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99667,116005,110042,75586,70344,94698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[103671,95560,104303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990611"}]},"cv_name":"biological_process","definition":"Modulation of the frequency, rate or extent of translation as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"part_of","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02072":null,"SJAG_02592":null,"SJAG_03869":null,"SJAG_04383":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation in response to stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"translational stress response","type":"exact"}],"termid":"GO:0043555","terms_by_termid":{"GO:1990611":null,"GO:1990625":null}}


id: PBO:0027249
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity","termid":"PBO:0027249"}


id: PBO:0082975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic thioredoxin isoenzyme; part of the thioredoxin system that protects cells from oxidative and reductive stress; subunit of the LMA1 complex, with Pbi2p, that promotes vacuole inheritance; cofactor for Tsa1p; required for ER-Golgi transport; facilitates mitochondrial import of small Tims (Tim9p, Tim10p, Tim13p) by maintaining them in reduced form along with Trx1p; component of a signal transduction redox relay in a light sensing pathway; abundance increases under DNA replication stress","termid":"PBO:0082975"}


id: PBO:0017484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-biotically_interacts_with","termid":"PBO:0017484"}


id: MONDO:0011443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any febrile seizures, familial in which the cause of the disease is a mutation in the ADGRV1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"febrile seizures, familial","termid":"MONDO:0000032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"febrile seizures, familial, 4","secondary_identifiers":["OMIM:604352","UMLS:C1858493","MESH:C565788","DOID:0111305","MEDGEN:347652"],"synonyms":[{"name":"ADGRV1 febrile seizures, familial","type":"exact"},{"name":"FEB4","type":"related"},{"name":"convulsions, familial febrile, 4","type":"related"},{"name":"febrile seizures, familial caused by mutation in ADGRV1","type":"exact"},{"name":"febrile seizures, familial, 4","type":"exact"},{"name":"febrile seizures, familial, type 4","type":"exact"}],"termid":"MONDO:0011443","xrefs":{"Monarch":{"xref_id":"0011443"}}}


id: PBO:0072080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 10","termid":"PBO:0072080"}


id: MONDO:0016986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital smooth muscle hamartoma (CSMH) is a rare cutaneous hamartomatous lesion most often located on the lumbosacral area or proximal limbs (but rarely on atypical areas such as scalp, eyelid or foot) and characterized by a disorganized proliferation of smooth muscle fibers of arrector pili presenting usually as a localized skin-colored or hyperpigmented plaque (up to 10 cm in diameter) with prominent vellus hairs (most common classic form) or less commonly by multiple skin-colored papules that can coalesce to form irregularly shaped plaques. With time, hyperpigmentation and vellus hairs usually diminish and neither malignant transformation nor associated systemic involvement has been reported.","definition_xrefs":["Orphanet:263435"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital smooth muscle hamartoma","secondary_identifiers":["GARD:20902","SCTID:239144007","UMLS:C0406819","ICD9:759.6","MEDGEN:590701"],"termid":"MONDO:0016986","xrefs":{"Monarch":{"xref_id":"0016986"}}}


id: MOD:00999
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00404. Remap to MOD:00404.","definition_xrefs":["DeltaMass:90"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00999 homoseryl lactone (obsolete MOD:00999)","termid":"MOD:00999"}


id: PBO:0038407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_regulates_activity_of","termid":"PBO:0038407"}


id: PBO:0088412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi GDP-mannose transmembrane transporter Vrg4","termid":"PBO:0088412"}


id: MONDO:0000885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cloacal exstrophy (obsolete MONDO:0000885)","termid":"MONDO:0000885","xrefs":{"Monarch":{"xref_id":"0000885"}}}


id: PBO:0081000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 38","termid":"PBO:0081000"}


id: PR:O94348
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein YIPF5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04686","PRO:DNx","PANTHER:PTHR21236:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein yip1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC61.04c","secondary_identifiers":["UniProtKB:O94348"],"synonyms":[{"name":"Spom972h-YIPF5","type":"exact"}],"termid":"PR:O94348"}


id: PBO:0060895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuraminidase 4","termid":"PBO:0060895"}


id: MONDO:0013600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sleep disorder characterized by difficulty in falling asleep and/or remaining asleep.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"sleep-wake disorder","termid":"MONDO:0003406"},{"relation_name":"excluded_subClassOf","term_name":"mental disorder","termid":"MONDO:0005084"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"sleep disorder","termid":"MONDO:0100081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insomnia","secondary_identifiers":["ICD10CM:G47.0","ICD10WHO:G47.0","NCIT:C28286","ICD9:780.52","HP:0100785","SCTID:193462001","EFO:0004698","UMLS:C0917801","MEDGEN:214589","MESH:D007319"],"synonyms":[{"name":"DSPD","type":"related"},{"name":"DSPS","type":"related"},{"name":"delayed sleep phase disorder, susceptibility to","type":"related"},{"name":"delayed sleep phase syndrome, susceptibility to","type":"related"},{"name":"insomnia","type":"exact"},{"name":"insomnia (disease)","type":"exact"}],"termid":"MONDO:0013600","xrefs":{"Monarch":{"xref_id":"0013600"}}}


id: GO:0042374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phylloquinone, a quinone-derived compound synthesized by green plants. Phylloquinone has vitamin K activity and is known as vitamin K1.","definition_xrefs":["PMID:27337968","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin K metabolic process","termid":"GO:0042373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"phylloquinone metabolic process","synonyms":[{"name":"phylloquinone metabolism","type":"exact"},{"name":"phytomenadione metabolic process","type":"exact"},{"name":"phytomenadione metabolism","type":"exact"},{"name":"phytonadione metabolic process","type":"exact"},{"name":"phytonadione metabolism","type":"exact"},{"name":"phytylmenaquinone metabolic process","type":"exact"},{"name":"phytylmenaquinone metabolism","type":"exact"},{"name":"vitamin K1 metabolic process","type":"exact"},{"name":"vitamin K1 metabolism","type":"exact"}],"termid":"GO:0042374"}


id: GO:1905320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal stem cell migration.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26846297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"mesenchymal stem cell migration","termid":"GO:1905319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal stem cell migration","termid":"GO:1905320"}


id: PBO:0057784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3064","termid":"PBO:0057784"}


id: PATO:0001540
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An amylose composition quality inhering in an bearer by virtue of the bearer's having negligible or no amylose content.","definition_xrefs":["TO:TO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylose composition","termid":"PATO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutinous","termid":"PATO:0001540"}


id: GO:0046055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dGMP, deoxyguanosine monophosphate (2'-deoxyguanosine 5'-phosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate catabolic process","termid":"GO:0009172"},{"relation_name":"is_a","term_name":"dGMP metabolic process","termid":"GO:0046054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dGMP catabolic process","synonyms":[{"name":"dGMP breakdown","type":"exact"},{"name":"dGMP catabolism","type":"exact"},{"name":"dGMP degradation","type":"exact"}],"termid":"GO:0046055"}


id: PATO:0000414
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branchiness quality inhering in a bearer by virtue of the bearer's lacking branches.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiness","termid":"PATO:0002009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unbranched","termid":"PATO:0000414"}


id: MONDO:0020399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoplasia of the mitral valve annulus is a rare, congenital, mitral valve malformation characterized by hypoplastic annulus which usually appears within a complete mitral valve hypoplasia, causing mitral valve stenosis. Association with other cardiac malformation is common, including coarctation of the aorta, aortic valve stenosis, Shone complex and hypoplastic left heart syndrome.","definition_xrefs":["Orphanet:99058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypoplasia of the mitral valve annulus","secondary_identifiers":["SCTID:449270002","UMLS:C3165203","ICD10CM:Q23.2","GARD:19625","ICD9:746.89","MEDGEN:757607"],"termid":"MONDO:0020399","xrefs":{"Monarch":{"xref_id":"0020399"}}}


id: PBO:0086769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; similar to transcriptional regulators from the Zn[2]-Cys[6] binuclear cluster protein family; mRNA is weakly cell cycle regulated, peaking in S phase; induced rapidly upon MMS treatment","termid":"PBO:0086769"}


id: GO:0052002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of substance in host (obsolete GO:0052002)","termid":"GO:0052002"}


id: MONDO:0013106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"},{"relation_name":"is_a","term_name":"basal cell carcinoma, susceptibility to","termid":"MONDO:0100047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal cell carcinoma, susceptibility to, 6","secondary_identifiers":["UMLS:C2751600","OMIM:613063","MEDGEN:414059"],"synonyms":[{"name":"BCC6","type":"exact"},{"name":"basal cell carcinoma, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0013106","xrefs":{"Monarch":{"xref_id":"0013106"}}}


id: PBO:0109136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHOX homeobox 2","termid":"PBO:0109136"}


id: GO:0042110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:mgi_curators","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell activation","synonyms":[{"name":"T lymphocyte activation","type":"exact"},{"name":"T-cell activation","type":"exact"},{"name":"T-lymphocyte activation","type":"exact"}],"termid":"GO:0042110"}


id: FYPO:0001320
data:
  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id: PBO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Mdj1 (predicted)","termid":"PBO:0005136"}


id: PBO:0034345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_out-paralogy_relationship_with","termid":"PBO:0034345"}


id: PBO:0042665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 21","termid":"PBO:0042665"}


id: FYPO:0004937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal during the first meiotic nuclear division. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiosis","termid":"FYPO:0002959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during meiosis I","synonyms":[{"name":"decreased RNA accumulation during meiosis I","type":"related"},{"name":"decreased RNA level during first meiotic nuclear division","type":"exact"},{"name":"decreased transcript level during meiosis I","type":"exact"},{"name":"reduced RNA level during meiosis I","type":"exact"}],"termid":"FYPO:0004937"}


id: GO:0120074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell differentiation, the process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an endocardial cushion cell.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"regulates","term_name":"endocardial cushion cell differentiation","termid":"GO:0061443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endocardial cushion cell differentiation","termid":"GO:0120074"}


id: PBO:0028813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_centromeric_heterochromatin","termid":"PBO:0028813"}


id: PBO:0076269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapse associated protein 1","termid":"PBO:0076269"}


id: PBO:0001557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan synthase (predicted)","termid":"PBO:0001557"}


id: PBO:0079004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 4-1","termid":"PBO:0079004"}


id: GO:0097055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of agmatine ((4-aminobutyl)guanidine, NH2-CH2-CH2-CH2-CH2-NH-C(-NH2)(=NH)). Agmatine is the decarboxylation product of the amino acid arginine and is an intermediate in polyamine biosynthesis. It is synthesized in the brain, stored in synaptic vesicles, accumulated by uptake, released by membrane depolarization, and inactivated by agmatinase.","definition_xrefs":["GOC:pr","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"agmatine biosynthetic process","secondary_identifiers":["Reactome:R-HSA-351143"],"synonyms":[{"name":"agmatine anabolism","type":"exact"},{"name":"agmatine biosynthesis","type":"exact"},{"name":"agmatine formation","type":"exact"},{"name":"agmatine synthesis","type":"exact"}],"termid":"GO:0097055"}


id: PBO:0056840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MGAT4 family member E, pseudogene","termid":"PBO:0056840"}


id: PBO:0006172
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_cell","termid":"PBO:0006172"}


id: GO:0032671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-27 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-27 production","termid":"GO:0032631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-27 production","secondary_identifiers":["GO:0045531"],"synonyms":[{"name":"regulation of IL-27 production","type":"exact"},{"name":"regulation of interleukin-27 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-27 formation","type":"narrow"},{"name":"regulation of interleukin-27 synthesis","type":"narrow"}],"termid":"GO:0032671"}


id: PBO:0083238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; encoded within the 25S rRNA gene on the opposite strand","termid":"PBO:0083238"}


id: MONDO:0011384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential hypertension","termid":"MONDO:0001134"},{"relation_name":"excluded_subClassOf","term_name":"essential hypertension, genetic","termid":"MONDO:0007781"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertension, essential, susceptibility to, 1","secondary_identifiers":["OMIM:603918","MEDGEN:395143","UMLS:C1858967"],"synonyms":[{"name":"Hyt1","type":"related"},{"name":"hypertension, essential, susceptibility to, 1","type":"exact"},{"name":"hypertension, essential, susceptibility to, type 1","type":"exact"}],"termid":"MONDO:0011384","xrefs":{"Monarch":{"xref_id":"0011384"}}}


id: PBO:0082698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the mannan polymerase I; complex contains Van1p and Mnn9p and is involved in the first steps of mannan synthesis; mutants are vanadate-resistant","termid":"PBO:0082698"}


id: PBO:0072366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 52","termid":"PBO:0072366"}


id: MONDO:0043139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"visual epilepsy","termid":"MONDO:0001386"},{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"microcephaly sparse hair intellectual disability seizures","secondary_identifiers":["MESH:C537545","UMLS:C2931530","MEDGEN:444077"],"termid":"MONDO:0043139","xrefs":{"Monarch":{"xref_id":"0043139"}}}


id: GO:0009612
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mechanical stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"chemi-mechanical coupling","type":"related"},{"name":"mechanical stimulus response","type":"exact"}],"termid":"GO:0009612","terms_by_termid":{"GO:0050982":null}}


id: PBO:0043807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase N subunit 1","termid":"PBO:0043807"}


id: PBO:0086386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative calcium channel involved in calcium release under hypotonic stress; required for uptake of FAD into endoplasmic reticulum; involved in cell wall maintenance; FLC2 has a paralog, YOR365C, that arose from the whole genome duplication","termid":"PBO:0086386"}


id: PR:P40384
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein SPO11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10848:SF0","OMA:SCHPO00725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.11","secondary_identifiers":["UniProtKB:P40384"],"synonyms":[{"name":"Spom972h-SPO11","type":"exact"}],"termid":"PR:P40384"}


id: GO:0070663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte proliferation.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"leukocyte proliferation","termid":"GO:0070661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte proliferation","termid":"GO:0070663"}


id: PBO:0017792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation diffusion family zinc transmembrane transporter Cis4","termid":"PBO:0017792"}


id: MONDO:0018694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired abnormal communication between the trachea and the esophagus.","definition_xrefs":["NCIT:C35080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal disorder","termid":"MONDO:0002567"},{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"isolated tracheo-esophageal fistula","secondary_identifiers":["Orphanet:454750","GARD:21895"],"synonyms":[{"name":"H-type tracheoesophageal fistula","type":"exact"},{"name":"isolated tracheoesophageal fistula","type":"related"},{"name":"tracheo-esophageal fistula","type":"exact"},{"name":"tracheoesophageal fistula","type":"exact"}],"termid":"MONDO:0018694","xrefs":{"Monarch":{"xref_id":"0018694"}}}


id: PBO:0070289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 30","termid":"PBO:0070289"}


id: GO:1904231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of succinate dehydrogenase activity.","definition_xrefs":["PMID:18160053","GOC:TermGenie","GOC:BHF","GO_REF:0000059","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"},{"relation_name":"is_a","term_name":"regulation of succinate dehydrogenase activity","termid":"GO:1904229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of succinate dehydrogenase activity","synonyms":[{"name":"activation of fumarate dehydrogenase activity","type":"narrow"},{"name":"activation of fumarate reductase activity","type":"narrow"},{"name":"activation of fumaric hydrogenase activity","type":"narrow"},{"name":"activation of succinate dehydrogenase activity","type":"narrow"},{"name":"activation of succinate oxidoreductase activity","type":"narrow"},{"name":"activation of succinate:(acceptor) oxidoreductase activity","type":"narrow"},{"name":"activation of succinate:acceptor oxidoreductase activity","type":"narrow"},{"name":"activation of succinic acid dehydrogenase activity","type":"narrow"},{"name":"activation of succinodehydrogenase activity","type":"narrow"},{"name":"activation of succinyl dehydrogenase activity","type":"narrow"},{"name":"positive regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"positive regulation of fumarate reductase activity","type":"exact"},{"name":"positive regulation of fumaric hydrogenase activity","type":"exact"},{"name":"positive regulation of succinate oxidoreductase activity","type":"exact"},{"name":"positive regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"positive regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"positive regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"positive regulation of succinodehydrogenase activity","type":"exact"},{"name":"positive regulation of succinyl dehydrogenase activity","type":"exact"},{"name":"up regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"up regulation of fumarate reductase activity","type":"exact"},{"name":"up regulation of fumaric hydrogenase activity","type":"exact"},{"name":"up regulation of succinate dehydrogenase activity","type":"exact"},{"name":"up regulation of succinate oxidoreductase activity","type":"exact"},{"name":"up regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"up regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"up regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"up regulation of succinodehydrogenase activity","type":"exact"},{"name":"up regulation of succinyl dehydrogenase activity","type":"exact"},{"name":"up-regulation of fumarate dehydrogenase activity","type":"exact"},{"name":"up-regulation of fumarate reductase activity","type":"exact"},{"name":"up-regulation of fumaric hydrogenase activity","type":"exact"},{"name":"up-regulation of succinate dehydrogenase activity","type":"exact"},{"name":"up-regulation of succinate oxidoreductase activity","type":"exact"},{"name":"up-regulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"up-regulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"up-regulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"up-regulation of succinodehydrogenase activity","type":"exact"},{"name":"up-regulation of succinyl dehydrogenase activity","type":"exact"},{"name":"upregulation of fumarate dehydrogenase activity","type":"exact"},{"name":"upregulation of fumarate reductase activity","type":"exact"},{"name":"upregulation of fumaric hydrogenase activity","type":"exact"},{"name":"upregulation of succinate dehydrogenase activity","type":"exact"},{"name":"upregulation of succinate oxidoreductase activity","type":"exact"},{"name":"upregulation of succinate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"upregulation of succinate:acceptor oxidoreductase activity","type":"exact"},{"name":"upregulation of succinic acid dehydrogenase activity","type":"exact"},{"name":"upregulation of succinodehydrogenase activity","type":"exact"},{"name":"upregulation of succinyl dehydrogenase activity","type":"exact"}],"termid":"GO:1904231"}


id: FYPO:0005045
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is decreased, and sister chromatids do not move towards the spindle poles at the same time during mitosis prior to completion of chromosome segregation.","definition_xrefs":["PomBase:mah","PMID:20935472"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lagging mitotic chromosomes","termid":"FYPO:0000228"},{"relation_name":"has_part","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"},{"relation_name":"is_a","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000641","FYPO:0000337","FYPO:0000054","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid segregation with lagging chromosomes and decreased rate of mitotic spindle elongation","synonyms":[{"name":"abnormal mitotic sister chromatid segregation with lagging chromosomes and decreased rate of mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"abnormal sister chromatid segregation with lagging chromosomes and decreased rate of spindle elongation during mitotic cell cycle","type":"related"},{"name":"lagging mitotic chromosomes with decreased rate of mitotic spindle elongation","type":"exact"},{"name":"lagging mitotic chromosomes with decreased spindle elongation rate","type":"exact"},{"name":"lagging mitotic sister chromatids, with decreased rate of mitotic spindle elongation","type":"exact"}],"termid":"FYPO:0005045"}


id: PBO:0002370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD phosphatase Rtr1 (predicted)","termid":"PBO:0002370"}


id: PBO:0080002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 11","termid":"PBO:0080002"}


id: PR:Q10442
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet801 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C12B10.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.09","synonyms":[{"name":"Spom972h-pet801","type":"exact"}],"termid":"PR:Q10442"}


id: PBO:0083527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SAS10/YDL153C, a component of the small ribosomal subunit processosome","termid":"PBO:0083527"}


id: PATO:0000474
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000474 shattering value (obsolete PATO:0000474)","termid":"PATO:0000474"}


id: PR:O74327
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- avt5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transporter 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.07c","synonyms":[{"name":"Spom972h-avt5","type":"exact"}],"termid":"PR:O74327"}


id: PBO:0027421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_5'-3'_exonucleolytic_mRNA_catabolic_process","termid":"PBO:0027421"}


id: GO:0019071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cleavage of viral DNA into singular functional units.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete viral DNA cleavage involved in viral genome maturation (obsolete GO:0019071)","termid":"GO:0019071"}


id: PBO:0076503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 3","termid":"PBO:0076503"}


id: GO:0000974
data:
  {"annotated_genes":["SJAG_05212","SJAG_01810","SJAG_00414","SJAG_02078","SJAG_01214","SJAG_04898","SJAG_04783","SJAG_03601","SJAG_02227","SJAG_16453","SJAG_03993","SJAG_03711","SJAG_00446","SJAG_00859","SJAG_01408","SJAG_02722","SJAG_00639","SJAG_04117","SJAG_00094","SJAG_02304","SJAG_00911","SJAG_01504","SJAG_05349","SJAG_03687","SJAG_02844","SJAG_04694","SJAG_04497"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70281,72177,72485,73496,73890,76470,77718,78244,78264,92628,95931,96499,98006,98339,98771,101024,103358,103533,106908,107528,108005,109599,111658,112117,115371,116350,119294],"is_not":false,"summary":null,"term":"GO:0000974"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of Prp19 and associated proteins that is involved in the transition from the precatalytic spliceosome to the activated form that catalyzes step 1 of splicing, and which remains associated with the spliceosome through the second catalytic step. It is widely conserved, found in both yeast and mammals, though the exact composition varies. In S. cerevisiae, it contains Prp19p, Ntc20p, Snt309p, Isy1p, Syf2p, Cwc2p, Prp46p, Clf1p, Cef1p, and Syf1p.","definition_xrefs":["GOC:krc","PMID:16540691","PMID:19239890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00094":null,"SJAG_00414":null,"SJAG_00446":null,"SJAG_00639":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01214":null,"SJAG_01408":null,"SJAG_01504":null,"SJAG_01810":null,"SJAG_02078":null,"SJAG_02227":null,"SJAG_02304":null,"SJAG_02722":null,"SJAG_02844":null,"SJAG_03601":null,"SJAG_03687":null,"SJAG_03711":null,"SJAG_03993":null,"SJAG_04117":null,"SJAG_04497":null,"SJAG_04694":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_05212":null,"SJAG_05349":null,"SJAG_16453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Prp19 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"MOS4-Associated Complex","type":"narrow"},{"name":"NTC","type":"related"},{"name":"Prp19/CDC5 complex","type":"narrow"},{"name":"nineteen complex","type":"narrow"}],"termid":"GO:0000974","terms_by_termid":{"GO:0000974":null}}


id: MONDO:0007075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital alacrima","termid":"MONDO:0019627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"alacrima, congenital, autosomal dominant","secondary_identifiers":["OMIM:103420","MEDGEN:934803","MESH:C566307","UMLS:C4310836","GARD:18165"],"synonyms":[{"name":"alacrima, congenital","type":"related"},{"name":"alacrimia congenita","type":"related"},{"name":"alacrimia congenita, autosomal dominant","type":"related"}],"termid":"MONDO:0007075","xrefs":{"Monarch":{"xref_id":"0007075"}}}


id: PBO:0091230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane aquaporin family transmembrane transporter","termid":"PBO:0091230"}


id: PBO:0087228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Secreted alpha-galactosidase; required for catabolic conversion of melibiose to glucose and galactose; regulated by several GAL genes","termid":"PBO:0087228"}


id: GO:0061688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A glycolytic process in which the glucose is catabolized to pyruvate by first entering the Entner-Doudoroff pathway to yield pyruvate and glyceraldehyde-3-phosphate. The glyceraldehyde-3-phosphate is subsequently converted to pyruvate by the core glycolytic enzymes.","definition_xrefs":["GOC:dph","PMID:9657988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0006091","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"glycolytic process via Entner-Doudoroff Pathway","synonyms":[{"name":"gluconate pathway","type":"related"}],"termid":"GO:0061688"}


id: GO:0021661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 4 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 4 development","termid":"GO:0021570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 morphogenesis","termid":"GO:0021661"}


id: PBO:0111746
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3HC4 type (RING finger)","termid":"PBO:0111746"}


id: PBO:0046670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen-related receptor alpha pseudogene 2","termid":"PBO:0046670"}


id: PBO:0086441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative lipase","termid":"PBO:0086441"}


id: FYPO:0001003
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more, but smaller, vacuoles than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lipid droplets present in spore cytoplasm in decreased numbers, mislocalized to ascus epiplasm","termid":"FYPO:0006053"},{"relation_name":"is_a","term_name":"small vacuoles present in increased numbers","termid":"FYPO:0002258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small vacuoles present in increased numbers during nitrogen starvation","synonyms":[{"name":"fragmented vacuoles during nitrogen starvation","type":"related"},{"name":"small vacuoles present in greater numbers during nitrogen starvation","type":"exact"},{"name":"small vacuoles present in increased numbers during nitrogen depletion","type":"exact"},{"name":"small vacuoles present in increased numbers during nitrogen deprivation","type":"exact"},{"name":"vacuole organization defects, fragmented vacuoles during nitrogen starvation","type":"related"},{"name":"vacuoles present in increased numbers, with decreased vacuole size, during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001003"}


id: PBO:0047534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 6","termid":"PBO:0047534"}


id: PBO:0038861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with dual PH domains 1","termid":"PBO:0038861"}


id: PBO:0040563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-N-acetyl-galactosaminyltransferase 3","termid":"PBO:0040563"}


id: PBO:0113018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Benzil oxidoreductase with preference for NADPH; localizes to the cytoplasm; induced by the DNA-damaging agent MMS; null mutant has elevated levels of spontaneous Rad52p foci; sequence similarity with short-chain dehydrogenase/reductases; putative paralog of IRC24","termid":"PBO:0113018"}


id: GO:0000906
data:
  {"annotated_genes":["SJAG_02360"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79047],"is_not":false,"summary":null,"term":"GO:0000906"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxy-2-butanone-4-phosphate + 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione = 6,7-dimethyl-8-ribityllumazine + phosphate.","definition_xrefs":["PMID:7559556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"6,7-dimethyl-8-ribityllumazine synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.5.1.78","MetaCyc:LUMAZINESYN-RXN","RHEA:26152"],"synonyms":[{"name":"lumazine synthase activity","type":"broad"}],"termid":"GO:0000906","terms_by_termid":{"GO:0000906":null}}


id: MONDO:0006154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extranodal marginal zone lymphoma of mucosa-associated lymphoid tissue that arises from the colon.","definition_xrefs":["NCIT:C5498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon lymphoma","termid":"MONDO:0002035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colon mucosa-associated lymphoid tissue lymphoma","secondary_identifiers":["UMLS:C1333096","EFO:1000186","MEDGEN:272492"],"synonyms":[{"name":"MALT lymphoma of colon","type":"exact"},{"name":"MALT lymphoma of the colon","type":"exact"},{"name":"MALToma of colon","type":"exact"},{"name":"MALToma of the colon","type":"exact"},{"name":"colon MALT lymphoma","type":"exact"},{"name":"colon MALToma","type":"exact"},{"name":"colonic MALT lymphoma","type":"exact"},{"name":"colonic MALToma","type":"exact"},{"name":"colonic mucosa-associated lymphoid tissue lymphoma","type":"exact"}],"termid":"MONDO:0006154","xrefs":{"Monarch":{"xref_id":"0006154"}}}


id: PBO:0000381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospho-2-dehydro-3-deoxyheptonate aldolase (predicted)","termid":"PBO:0000381"}


id: PBO:0082619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of a complex containing Cef1p; putatively involved in pre-mRNA splicing; has similarity to S. pombe Cwf27p; protein abundance increases in response to DNA replication stress","termid":"PBO:0082619"}


id: PBO:0112005
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Repeat Specific Silencing factor","termid":"PBO:0112005"}


id: GO:0061261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity, forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition","termid":"GO:0060231"},{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"part_of","term_name":"mesonephros morphogenesis","termid":"GO:0061206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","synonyms":[{"name":"mesonephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:0061261"}


id: PBO:0079407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 1","termid":"PBO:0079407"}


id: PBO:0041661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 6","termid":"PBO:0041661"}


id: PBO:0055083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2501","termid":"PBO:0055083"}


id: GO:1901019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of calcium ion transmembrane transporter activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of calcium ion transmembrane transporter activity (obsolete GO:1901019)","termid":"GO:1901019"}


id: FYPO:0008135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during G1/S ofinterphase.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during interphase","termid":"FYPO:0002821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization tomitotic spindle pole body during G1/S","termid":"FYPO:0008135"}


id: PBO:0073157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61 translocon subunit beta","termid":"PBO:0073157"}


id: MONDO:1011117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptorchidism that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptorchidism, non-human animal","termid":"MONDO:1010275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism, sheep","secondary_identifiers":["OMIA:000243-9940"],"termid":"MONDO:1011117","xrefs":{"Monarch":{"xref_id":"1011117"}}}


id: PBO:0088043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme (E2); key E2 partner with Ubc1p for the anaphase-promoting complex (APC); mediates degradation of abnormal or excess proteins, including calmodulin and histone H3; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication; interacts with many SCF ubiquitin protein ligases; component of the cellular stress response; UBC4 has a paralog, UBC5, that arose from the whole genome duplication","termid":"PBO:0088043"}


id: PBO:0041435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 24","termid":"PBO:0041435"}


id: GO:0003914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyrimidine-pyrimidone (6-4) photoproduct (in DNA) = 2 pyrimidine residues (in DNA). Catalyzes the reactivation of ultraviolet-irradiated DNA.","definition_xrefs":["GOC:mah","PMID:11124949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA photolyase activity","termid":"GO:0003913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829","GO:0140097"],"is_obsolete":false,"name":"DNA (6-4) photolyase activity","secondary_identifiers":["MetaCyc:RXN-10771","EC:4.1.99.13"],"termid":"GO:0003914"}


id: PBO:0078213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 7-6","termid":"PBO:0078213"}


id: GO:0010088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the principal food-conducting tissue of a vascular plant.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phloem or xylem histogenesis","termid":"GO:0010087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phloem development","synonyms":[{"name":"phloem histogenesis","type":"exact"}],"termid":"GO:0010088"}


id: PBO:0086554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGL149W is not an essential gene","termid":"PBO:0086554"}


id: PBO:0051403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 3, pseudogene","termid":"PBO:0051403"}


id: GO:0044306
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The specialized, terminal region of a neuron projection such as an axon or a dendrite.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuron projection terminus","synonyms":[{"name":"nerve terminal","type":"related"},{"name":"neuron projection terminal","type":"exact"},{"name":"neuron terminal specialization","type":"exact"}],"termid":"GO:0044306"}


id: GO:0005760
data:
  {"annotated_genes":["SJAG_02658"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63157],"is_not":false,"summary":null,"term":"GO:0005760"}]},"cv_name":"cellular_component","definition":"A DNA polymerase complex consisting of a large subunit, responsible for the catalytic activities, and a small accessory subunit. Functions in the replication and repair of mitochondrial DNA.","definition_xrefs":["GOC:jl","PMID:12045093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase complex","termid":"GO:0042575"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02658":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"gamma DNA polymerase complex","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0005760","terms_by_termid":{"GO:0005760":null}}


id: PBO:0090839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER packaging chaperone for amino acid permeases Psh3","termid":"PBO:0090839"}


id: PBO:0003399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex zeta subunit Cct6","termid":"PBO:0003399"}


id: GO:0071084
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha2-beta1 integrin complex bound to the cell surface protein CD47.","definition_xrefs":["PMID:10397731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha2-beta1 integrin-CD47 complex","synonyms":[{"name":"ITGA2-ITGB1-CD47 complex","type":"narrow"}],"termid":"GO:0071084"}


id: GO:1990522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nematode tail spike is generated and organized. An example of this process is seen in C. elegans, where the tapered tail spike is formed during embryogenesis by a filamentous process that passes posteriorly through hyp10, the tail ventral hypodermis; the filamentous process is formed by a binucleate cell, the tail-spike cell, that subsequently undergoes programmed cell death.","definition_xrefs":["GOC:kmv","PMID:6684600","PMID:17329362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tail spike morphogenesis","secondary_identifiers":["WBbt:0008072","WBbt:0006979"],"termid":"GO:1990522"}


id: PBO:0002348
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.31","termid":"PBO:0002348"}


id: GO:1902939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of intracellular calcium activated chloride channel activity.","definition_xrefs":["PMID:22946059","GOC:als","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of intracellular calcium activated chloride channel activity (obsolete GO:1902939)","synonyms":[{"name":"down regulation of intracellular calcium activated chloride channel activity","type":"exact"},{"name":"down-regulation of intracellular calcium activated chloride channel activity","type":"exact"},{"name":"downregulation of intracellular calcium activated chloride channel activity","type":"exact"},{"name":"inhibition of intracellular calcium activated chloride channel activity","type":"narrow"}],"termid":"GO:1902939"}


id: GO:0061610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways in which glycerol, 1,2,3-propanetriol, is converted to glycerone phosphate.","definition_xrefs":["GOC:dph","ISBN:0201090910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol metabolic process","termid":"GO:0006071"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"glycerol to glycerone phosphate metabolic process","synonyms":[{"name":"glycerol metabolism to DHAP","type":"exact"},{"name":"glycerol metabolism to dihydroxyacetone phosphate","type":"exact"},{"name":"glycerol metabolism to glycerone phosphate","type":"exact"},{"name":"glycerol to DHAP metabolic process","type":"exact"},{"name":"glycerol to dihydroxyacetone phosphate metabolic process","type":"exact"}],"termid":"GO:0061610"}


id: PBO:0005094
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human hAGO2","termid":"PBO:0005094"}


id: PBO:0070592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 58","termid":"PBO:0070592"}


id: MONDO:1012664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lysosomal storage disorder characterized by deficient iduronate-2-sulfatase (IDS) activity that occurs in kakas.","definition_xrefs":["PMID:34424960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucopolysaccharidosis or mucopolysaccharidosis-like disorder, non-human animal","termid":"MONDO:1012581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucopolysaccharidosis II, Kaka","secondary_identifiers":["OMIA:001317-176043"],"synonyms":[{"name":"Hunter syndrome, Kaka","type":"related"},{"name":"MPS II","type":"exact"}],"termid":"MONDO:1012664","xrefs":{"Monarch":{"xref_id":"1012664"}}}


id: PBO:0051527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor antagonist","termid":"PBO:0051527"}


id: PBO:0047799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box I2","termid":"PBO:0047799"}


id: MONDO:0006799
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A primary or metastatic neoplasm that affects the hypothalamus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"thalamic cancer","termid":"MONDO:0003766"},{"relation_name":"is_a","term_name":"hypothalamic disorder","termid":"MONDO:0002150"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"hypothalamic neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:254968009","DOID:3644","icd11.foundation:1383549237","NCIT:C3129","MEDGEN:5717","UMLS:C0020659","EFO:1000979","MESH:D007029"],"synonyms":[{"name":"hypothalamic neoplasms","type":"exact"},{"name":"hypothalamic tumor","type":"exact"},{"name":"hypothalamic tumour","type":"exact"},{"name":"hypothalamus neoplasm","type":"exact"},{"name":"hypothalamus tumor","type":"exact"},{"name":"hypothalamus tumour","type":"exact"},{"name":"neoplasm of hypothalamus","type":"exact"},{"name":"neoplasm of the hypothalamus","type":"exact"},{"name":"tumor of hypothalamus","type":"exact"},{"name":"tumor of the hypothalamus","type":"exact"},{"name":"tumour of hypothalamus","type":"exact"},{"name":"tumour of the hypothalamus","type":"exact"}],"termid":"MONDO:0006799","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0006799"}}}


id: GO:0150069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of tubulin deacetylase activity.","definition_xrefs":["PMID:19457097","GOC:bc","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of tubulin deacetylase activity (obsolete GO:0150069)","termid":"GO:0150069"}


id: PBO:0076196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 5","termid":"PBO:0076196"}


id: PBO:0033822
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HemeRYthrin-like domain","termid":"PBO:0033822"}


id: PBO:0064133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2","termid":"PBO:0064133"}


id: PATO:0001748
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality in which a portion of the outermost boundary of an entity folds in space such that a portion that was originally convex is now concave.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave","termid":"PATO:0001857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invaginated","termid":"PATO:0001748"}


id: MONDO:0020134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"cystic malformation of the posterior fossa","secondary_identifiers":["ICD9:742.4","UMLS:C3662134","Orphanet:98520","MEDGEN:783289","SCTID:35111000119109"],"termid":"MONDO:0020134","xrefs":{"Monarch":{"xref_id":"0020134"}}}


id: PBO:0005015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Enp2 (predicted)","termid":"PBO:0005015"}


id: PATO:0001199
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being narrow, with the two opposite margins parallel.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear","termid":"PATO:0001199"}


id: PBO:0088838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-di-phosphooligosaccharide-protein glycotransferase subunit Wbp1","termid":"PBO:0088838"}


id: GO:0102202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + solasodine = UDP + solasodine 3-O-beta-D-glucopyranoside + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete soladodine glucosyltransferase activity (obsolete GO:0102202)","termid":"GO:0102202"}


id: PBO:0044916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol O-acyltransferase 2 like 7, pseudogene","termid":"PBO:0044916"}


id: GO:0042165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a neurotransmitter, any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter binding (obsolete GO:0042165)","termid":"GO:0042165"}


id: PBO:0086599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression is cell-cycle regulated, Azf1p-dependent, and heat-inducible; YNR014W has a paralog, YMR206W, that arose from the whole genome duplication","termid":"PBO:0086599"}


id: PBO:0085294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pheromone-regulated protein; contains 3 predicted transmembrane segments and an FF sequence, a motif involved in COPII binding; member of DUP240 gene family; PRM9 has a paralog, PRM8, that arose from a segmental duplication","termid":"PBO:0085294"}


id: GO:0102798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: heptanal + O2 + H2O = H+ + heptanoate + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete heptaldehyde:oxygen oxidoreductase activity (obsolete GO:0102798)","termid":"GO:0102798"}


id: PBO:0002625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III transcription factor TFIIIA","termid":"PBO:0002625"}


id: GO:0000838
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that recognizes and ubiquitinates proteins with misfolded membrane domains during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligase Hrd1p.","definition_xrefs":["PMID:16873066","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hrd1p ubiquitin ligase complex","termid":"GO:0000836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005783","GO:0005737","GO:0005789"],"is_obsolete":false,"name":"Hrd1p ubiquitin ligase ERAD-M complex","termid":"GO:0000838"}


id: GO:0016856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a reaction that alters the configuration of one or more chiral centers in a hydroxy acid molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","secondary_identifiers":["EC:5.1.2.-"],"termid":"GO:0016856"}


id: PBO:0086965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory protein that binds Pdc2p and Thi2p transcription factors; activates thiamine biosynthesis transcription factors Pdc2p and Thi2p by binding to them, but releases and de-activates them upon binding to thiamine pyrophosphate (TPP), the end product of the pathway; has similarity to decarboxylases but enzymatic activity is not detected","termid":"PBO:0086965"}


id: GO:0072747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chloramphenicol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chloramphenicol","termid":"GO:1901322"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chloramphenicol","termid":"GO:0072747"}


id: GO:1904490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of mitochondrial unfolded protein response.","definition_xrefs":["GOC:TermGenie","PMID:25961505","GO_REF:0000063","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mitochondrial unfolded protein response by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1904490)","synonyms":[{"name":"negative regulation of mitochondrial unfolded protein response by down regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mitochondrial unfolded protein response by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mitochondrial unfolded protein response by down-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mitochondrial unfolded protein response by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mitochondrial unfolded protein response by downregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mitochondrial unfolded protein response by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mitochondrial unfolded protein response by inhibition of global transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mitochondrial unfolded protein response by inhibition of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mitochondrial unfolded protein response by negative regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mitochondrial unfolded protein response by negative regulation of global transcription from Pol II promoter","type":"related"},{"name":"negative regulation of mitochondrial unfolded protein response by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"negative regulation of mitochondrial unfolded protein response by negative regulation of transcription from RNA polymerase II promoter, global","type":"related"},{"name":"negative regulation of mtUPR by down regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mtUPR by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mtUPR by down-regulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mtUPR by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mtUPR by downregulation of global transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mtUPR by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mtUPR by inhibition of global transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mtUPR by inhibition of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mtUPR by negative regulation of gene-specific transcription from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of mtUPR by negative regulation of global transcription from Pol II promoter","type":"related"},{"name":"negative regulation of mtUPR by negative regulation of transcription from Pol II promoter","type":"exact"},{"name":"negative regulation of mtUPR by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of mtUPR by negative regulation of transcription from RNA polymerase II promoter, global","type":"related"}],"termid":"GO:1904490"}


id: MONDO:0017958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magic syndrome","secondary_identifiers":["Orphanet:324972","GARD:13371","UMLS:C0406568","MEDGEN:590513"],"synonyms":[{"name":"mouth and genital ulcers with inflamed cartilage","type":"exact"}],"termid":"MONDO:0017958","xrefs":{"Monarch":{"xref_id":"0017958"}}}


id: GO:0050434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of viral transcription.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral transcription","termid":"GO:0046782"},{"relation_name":"is_a","term_name":"positive regulation of viral process","termid":"GO:0048524"},{"relation_name":"positively_regulates","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral transcription","secondary_identifiers":["Reactome:R-HSA-167246"],"synonyms":[{"name":"activation of viral transcription","type":"narrow"},{"name":"stimulation of viral transcription","type":"narrow"},{"name":"up regulation of viral transcription","type":"exact"},{"name":"up-regulation of viral transcription","type":"exact"},{"name":"upregulation of viral transcription","type":"exact"}],"termid":"GO:0050434"}


id: GO:1905363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endosomal vesicle fusion.","definition_xrefs":["GOC:bc","GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:26911690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of endosomal vesicle fusion","termid":"GO:1905364"},{"relation_name":"positively_regulates","term_name":"endosomal vesicle fusion","termid":"GO:0034058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"positive regulation of endosomal vesicle fusion","synonyms":[{"name":"activation of endosomal vesicle fusion","type":"narrow"},{"name":"activation of endosome vesicle fusion","type":"narrow"},{"name":"positive regulation of endosome vesicle fusion","type":"exact"},{"name":"up regulation of endosomal vesicle fusion","type":"exact"},{"name":"up regulation of endosome vesicle fusion","type":"exact"},{"name":"up-regulation of endosomal vesicle fusion","type":"exact"},{"name":"up-regulation of endosome vesicle fusion","type":"exact"},{"name":"upregulation of endosomal vesicle fusion","type":"exact"},{"name":"upregulation of endosome vesicle fusion","type":"exact"}],"termid":"GO:1905363"}


id: PBO:0061432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group H member 5, pseudogene","termid":"PBO:0061432"}


id: PBO:0028483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity","termid":"PBO:0028483"}


id: GO:0016004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a phospholipase, an enzyme that catalyzes of the hydrolysis of a glycerophospholipid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipase activator activity","termid":"GO:0060229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0140677","GO:0098772"],"is_obsolete":false,"name":"phospholipase activator activity","secondary_identifiers":["Reactome:R-HSA-400023"],"termid":"GO:0016004"}


id: PBO:0086392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative component of the protein phosphatase type 2A complex","termid":"PBO:0086392"}


id: PBO:0027769
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle_during_anaphase","termid":"PBO:0027769"}


id: PBO:0029122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-DNA_content_increased","termid":"PBO:0029122"}


id: PBO:0084258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositolphosphotransferase; involved in synthesis of mannose-(inositol-P)2-ceramide (M(IP)2C), the most abundant sphingolipid; can mutate to resistance to the antifungals syringomycin E and DmAMP1 and to K. lactis zymocin","termid":"PBO:0084258"}


id: PBO:0084889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial transcription elongation factor; DEAD-box protein; required for efficient splicing of mitochondrial Group I and II introns; non-polar RNA helicase that also facilities strand annealing; promotes RNA folding by stabilizing an early assembly intermediate","termid":"PBO:0084889"}


id: GO:1901767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbapenem.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:9402024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic metabolic process","termid":"GO:0030653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"carbapenem metabolic process","synonyms":[{"name":"carbapenem metabolism","type":"exact"}],"termid":"GO:1901767"}


id: GO:1903923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein processing in phagocytic vesicle.","definition_xrefs":["GOC:TermGenie","GOC:als","PMID:23325791","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein processing","termid":"GO:0010954"},{"relation_name":"is_a","term_name":"regulation of protein processing in phagocytic vesicle","termid":"GO:1903921"},{"relation_name":"positively_regulates","term_name":"protein processing in phagocytic vesicle","termid":"GO:1900756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of protein processing in phagocytic vesicle","synonyms":[{"name":"activation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"activation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"activation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"narrow"},{"name":"activation of protein maturation by peptide bond cleavage in phagosome","type":"narrow"},{"name":"activation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"narrow"},{"name":"activation of protein maturation by peptide bond hydrolysis in phagosome","type":"narrow"},{"name":"activation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"activation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"activation of protein processing in phagocytic vesicle","type":"narrow"},{"name":"activation of protein processing in phagosome","type":"narrow"},{"name":"positive regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"positive regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"positive regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"positive regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"positive regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"positive regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"positive regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"positive regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"positive regulation of protein processing in phagosome","type":"exact"},{"name":"up regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"up regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"up regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"up regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"up regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"up regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"up regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"up regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"up regulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"up regulation of protein processing in phagosome","type":"exact"},{"name":"up-regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"up-regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"up-regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"up-regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"up-regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"up-regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"up-regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"up-regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"up-regulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"up-regulation of protein processing in phagosome","type":"exact"},{"name":"upregulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"upregulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"upregulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"upregulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"upregulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"upregulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"upregulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"upregulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"upregulation of protein processing in phagocytic vesicle","type":"exact"},{"name":"upregulation of protein processing in phagosome","type":"exact"}],"termid":"GO:1903923"}


id: GO:0003411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another and contributes to the physical shaping or formation of the camera-type eye.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility involved in camera-type eye morphogenesis","termid":"GO:0003411"}


id: PBO:0080998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 34","termid":"PBO:0080998"}


id: PBO:0117122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG6 antisense RNA 1","termid":"PBO:0117122"}


id: PBO:0060105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 6","termid":"PBO:0060105"}


id: PBO:0017900
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae OPI3","termid":"PBO:0017900"}


id: MONDO:0018693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete kuru (obsolete MONDO:0018693)","termid":"MONDO:0018693","xrefs":{"Monarch":{"xref_id":"0018693"}}}


id: MONDO:0976231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 83","secondary_identifiers":["OMIM:621100"],"termid":"MONDO:0976231","xrefs":{"Monarch":{"xref_id":"0976231"}}}


id: PBO:0066434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated endocrine specific protein 18","termid":"PBO:0066434"}


id: GO:0044777
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homotetrameric protein complex that is essential for DNA replication. It supercoils the single-stranded DNA preventing DNA duplexing before the polymerase holoenzyme passes and synthesizes the complementary strand. It is also involved in DNA recombination and repair.","definition_xrefs":["GOC:jl","UniProt:P0AGE0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"nucleoid","termid":"GO:0009295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"single-stranded DNA-binding protein complex","synonyms":[{"name":"SSB complex","type":"exact"}],"termid":"GO:0044777"}


id: MONDO:0007176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Helicoid peripapillary chorioretinal degeneration is a rare autosomal dominantly inherited chorioretinal degeneration disease, presenting at birth or infancy, characterized by progressive bilateral retinal and choroidal atrophy, appearing as lesions on the optic nerve and peripheral ocular fundus and leading to central vision loss. Congenital anterior polar cataracts are sometimes associated with this disease.","definition_xrefs":["Orphanet:86813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"helicoid peripapillary chorioretinal degeneration","secondary_identifiers":["UMLS:C1862382","DOID:0111228","GARD:16757","icd11.foundation:896652469","MEDGEN:354733","MESH:C566236","OMIM:108985","SCTID:724384008"],"synonyms":[{"name":"SCRA","type":"exact"},{"name":"SVEINSSON chorioretinal atrophy","type":"related"},{"name":"Sveinsson chorioretinal atrophy","type":"exact"},{"name":"atrophia areata","type":"exact"},{"name":"helicoidal peripapillary chorioretinal Degeneration","type":"related"},{"name":"peripapillary chorioretinal Degeneration, Icelandic type","type":"related"}],"termid":"MONDO:0007176","xrefs":{"Monarch":{"xref_id":"0007176"}}}


id: PBO:0003241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Swd3","termid":"PBO:0003241"}


id: MONDO:0100313
data:
  {"annotated_genes":["SJAG_04001","SJAG_00118","SJAG_04621","SJAG_01143"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011303"},{"annotations":[86270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013589"},{"annotations":[87204,87205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014462"}]},"cv_name":"mondo","definition":"A renal disorder characterized by sclerotic lesions in the glomeruli. Causes include drugs, viruses, and malignancies (lymphomas), or it may be idiopathic. It presents with asymptomatic proteinuria or nephritic syndrome and it may lead to renal failure.","definition_xrefs":["NCIT:C37308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulosclerosis","termid":"MONDO:0000490"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null,"SJAG_04001":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0004236","GARD:6517","MEDGEN:4904","SCTID:236403004","MESH:D005923","ICD9:582.1","UMLS:C0017668","DOID:1312"],"synonyms":[{"name":"FGS","type":"exact"},{"name":"FGS (focal glomerular sclerosis)","type":"exact"},{"name":"FSGS","type":"exact"},{"name":"FSGS - focal segmental glomerulosclerosis","type":"exact"},{"name":"focal glomerular sclerosis","type":"exact"},{"name":"focal glomerulosclerosis","type":"exact"}],"termid":"MONDO:0100313","terms_by_termid":{"MONDO:0011303":null,"MONDO:0013589":null,"MONDO:0014462":null},"xrefs":{"Monarch":{"xref_id":"0100313"}}}


id: PBO:0071225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 66","termid":"PBO:0071225"}


id: SO:0000148
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One or more contigs that have been ordered and oriented using end-read information. Contains gaps that are filled with N's.","definition_xrefs":["SO:ls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial_genomic_sequence_assembly","termid":"SO:0001876"},{"relation_name":"part_of","term_name":"ultracontig","termid":"SO:0000719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supercontig","synonyms":[{"name":"scaffold","type":"related"}],"termid":"SO:0000148"}


id: GO:0000776
data:
  {"annotated_genes":["SJAG_03867","SJAG_00350","SJAG_04841","SJAG_01928","SJAG_01371","SJAG_04259","SJAG_03540","SJAG_00418","SJAG_00082","SJAG_01837","SJAG_05266","SJAG_02336","SJAG_03989","SJAG_01775","SJAG_01546","SJAG_03327","SJAG_03217","SJAG_04076","SJAG_00697","SJAG_04623","SJAG_04412","SJAG_04699","SJAG_02651","SJAG_02624","SJAG_01211","SJAG_02761","SJAG_03683","SJAG_00207","SJAG_02807","SJAG_01805","SJAG_02814","SJAG_05321","SJAG_01278","SJAG_05273","SJAG_02451","SJAG_04040","SJAG_03437","SJAG_03220","SJAG_04696","SJAG_01224","SJAG_00918","SJAG_03681","SJAG_03832","SJAG_04581","SJAG_00794","SJAG_01228","SJAG_00594","SJAG_02346","SJAG_04126","SJAG_04255","SJAG_00666","SJAG_02513","SJAG_02664","SJAG_00646","SJAG_05220","SJAG_04884","SJAG_01613","SJAG_00684","SJAG_02731","SJAG_04177","SJAG_03048","SJAG_03619","SJAG_04745","SJAG_01330","SJAG_01297","SJAG_01082","SJAG_03161","SJAG_05319"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70862,73194,73664,75742,76421,79763,79800,80211,89679,90307,91103,95098,97090,97599,99540,100470,102686,104225,104887,105216,105827,108611,109579,112268,112424,113765,115465,119252,119861,119965],"is_not":false,"summary":null,"term":"GO:0000776"},{"annotations":[117302,63838,79941,60788,68658,63771,62677,76810,75300,100855],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042729"},{"annotations":[116283,99596,112559,114875,113604,117049,110680],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000939"},{"annotations":[101672,114162],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180019"},{"annotations":[60422,70273,74756,80152],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000444"},{"annotations":[113933,94629,114519,98233,61960,106725,105900,90011,95028,113495,90362],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031511"},{"annotations":[69433,112057],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0033551"},{"annotations":[75347,76082,77512,76155],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031262"},{"annotations":[100713,114880,119058],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000940"}]},"cv_name":"cellular_component","definition":"A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"is_a","term_name":"supramolecular complex","termid":"GO:0099080"},{"relation_name":"part_of","term_name":"condensed chromosome, centromeric region","termid":"GO:0000779"}],"gene_count":68,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00207":null,"SJAG_00350":null,"SJAG_00418":null,"SJAG_00594":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00684":null,"SJAG_00697":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01228":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01928":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02451":null,"SJAG_02513":null,"SJAG_02624":null,"SJAG_02651":null,"SJAG_02664":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_02807":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03619":null,"SJAG_03681":null,"SJAG_03683":null,"SJAG_03832":null,"SJAG_03867":null,"SJAG_03989":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04126":null,"SJAG_04177":null,"SJAG_04255":null,"SJAG_04259":null,"SJAG_04412":null,"SJAG_04581":null,"SJAG_04623":null,"SJAG_04696":null,"SJAG_04699":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04884":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05273":null,"SJAG_05319":null,"SJAG_05321":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"kinetochore","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21802294":null,"PMID:32109380":null},"secondary_identifiers":["Wikipedia:Kinetochore","GO:0000777","GO:0031617","GO:0000778","GO:0005699"],"synonyms":[{"name":"NMS complex","type":"narrow"},{"name":"condensed chromosome kinetochore","type":"exact"},{"name":"condensed nuclear chromosome kinetochore","type":"exact"}],"termid":"GO:0000776","terms_by_termid":{"GO:0000444":null,"GO:0000776":null,"GO:0000939":null,"GO:0000940":null,"GO:0031262":null,"GO:0031511":null,"GO:0033551":null,"GO:0042729":null,"GO:0180019":null}}


id: PBO:0041862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 8","termid":"PBO:0041862"}


id: FYPO:0000445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in G1 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"cell cycle arrest in mitotic G1 phase","synonyms":[{"name":"cell cycle arrest in G1 phase during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest in mitotic G1 phase during vegetative growth","type":"exact"},{"name":"mitotic G1 phase arrest","type":"exact"},{"name":"mitotic cell cycle arrest in G1 phase","type":"exact"},{"name":"mitotic cell cycle progression in G1 phase: arrested","type":"related"}],"termid":"FYPO:0000445"}


id: PBO:0045707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysferlin","termid":"PBO:0045707"}


id: MOD:01315
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4x(2)H-labeled N6-succinyl-L-lysine.","definition_xrefs":["Unimod:65#K","PubMed:11344537","PubMed:15189151","PubMed:12175151","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-succinyl-L-lysine","termid":"MOD:01819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"4x(2)H labeled N6-succinyl-L-lysine","synonyms":[{"name":"Succinic anhydride labeling reagent, heavy form (+4amu, 4H2), N-term & K","type":"related"},{"name":"Succinyl:2H(4)","type":"related"}],"termid":"MOD:01315"}


id: MONDO:0015671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete diphtheria (obsolete MONDO:0015671)","termid":"MONDO:0015671","xrefs":{"Monarch":{"xref_id":"0015671"}}}


id: PBO:0041426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 48","termid":"PBO:0041426"}


id: GO:0044347
data:
  {"annotated_genes":["SJAG_01017","SJAG_00667"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94349,100486],"is_not":false,"summary":null,"term":"GO:0044347"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cell wall polysaccharides.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"},{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"is_a","term_name":"cell wall macromolecule catabolic process","termid":"GO:0016998"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall polysaccharide catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:0044347","terms_by_termid":{"GO:0044347":null}}


id: MONDO:0013796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"17q12 microduplication syndrome is a rare chromosomal anomaly with variable phenotypic expression and reduced penetrance associated with developmental delay, mild to severe intellectual disability, speech delay, seizures, microcephaly, behavioral abnormalities, autism spectrum disorder, eye or vision defects (such as strabismus, astigmatism, amblyopia, cataract, coloboma, and microphthalmia), non-specific dysmorphic features, hypotonia, cardiac and renal anomalies, schizophrenia.","definition_xrefs":["Orphanet:261272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 17","termid":"MONDO:0016967"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17q12 duplication syndrome","secondary_identifiers":["OMIM:614526","SCTID:764435003","UMLS:C3281137","DOID:0060433","MEDGEN:482767","GARD:13296"],"synonyms":[{"name":"17q12 duplication","type":"related"},{"name":"17q12 microduplication","type":"related"},{"name":"17q12 microduplication syndrome","type":"exact"},{"name":"chromosome 17q12 duplication syndrome","type":"exact"},{"name":"dup(17)(q12)","type":"exact"},{"name":"recurrent duplication of 17q12","type":"related"},{"name":"trisomy 17q12","type":"exact"}],"termid":"MONDO:0013796","xrefs":{"Monarch":{"xref_id":"0013796"}}}


id: PBO:0051219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 7-27 (pseudogene)","termid":"PBO:0051219"}


id: PBO:0049720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 5","termid":"PBO:0049720"}


id: GO:0004912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-3 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-3 receptor activity","secondary_identifiers":["Wikipedia:Interleukin-3_receptor"],"synonyms":[{"name":"IL-3 receptor activity","type":"exact"},{"name":"IL-3R","type":"exact"}],"termid":"GO:0004912"}


id: FYPO:0004080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which phosphorylation of serine at position 10 of histone H3 is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-S10 phosphorylation during vegetative growth","synonyms":[{"name":"increased histone H3 phosphorylation at S10 during vegetative growth","type":"exact"},{"name":"increased histone H3-S10 phosphorylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3S10 phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004080"}


id: FYPO:0004030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5' deoxyribonuclease (pyrimidine dimer) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal 5' deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0004028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased 5' deoxyribonuclease (pyrimidine dimer) activity","synonyms":[{"name":"reduced 5' deoxyribonuclease (pyrimidine dimer) activity","type":"exact"}],"termid":"FYPO:0004030"}


id: PR:O13782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cpp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein farnesyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.04c","synonyms":[{"name":"CAAX farnesyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FTase-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cpp1","type":"exact"},{"name":"ras proteins prenyltransferase subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13782"}


id: PBO:0031338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_amiodarone","termid":"PBO:0031338"}


id: GO:0006803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete glutathione conjugation reaction (obsolete GO:0006803)","synonyms":[{"name":"glutathione conjugation reaction","type":"exact"}],"termid":"GO:0006803"}


id: GO:1900363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mRNA polyadenylation.","definition_xrefs":["GOC:se","PMID:15121841","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mRNA polyadenylation (obsolete GO:1900363)","synonyms":[{"name":"regulation of cleavage and polyadenylylation specificity factor activity","type":"narrow"},{"name":"regulation of mRNA polyadenylylation","type":"exact"}],"termid":"GO:1900363"}


id: FYPO:0004112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased protein phosphorylation during mitotic G2 phase","synonyms":[{"name":"increased protein phosphorylation during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during mitotic G2-phase","type":"exact"},{"name":"increased protein/peptide phosphorylation during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0004112"}


id: GO:0070808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Hulle cell development, a process that leads to the formation of Hulle cells. Hulle cells are specialized multinucleate cells that originate from a nest-like aggregation of hyphae during sexual development and serve as nurse cells to the developing cleistothecium, or fruiting body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"Hulle cell development","termid":"GO:0070792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Hulle cell development","termid":"GO:0070808"}


id: PBO:0060367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myogenesis regulating glycosidase (putative)","termid":"PBO:0060367"}


id: PBO:0110321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 1 (ABCC1 blood group)","termid":"PBO:0110321"}


id: PBO:0077339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 78","termid":"PBO:0077339"}


id: MONDO:0017677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"punctate palmoplantar keratoderma","termid":"MONDO:0017675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"focal acral hyperkeratosis","secondary_identifiers":["SCTID:400115004","MEDGEN:724380","Orphanet:308013","UMLS:C1302839","GARD:21299"],"synonyms":[{"name":"PPKP3 without elastoidosis","type":"exact"},{"name":"PPPK3 without elastoidosis","type":"exact"},{"name":"punctate palmoplantar hyperkeratosis type 3 without elastoidosis","type":"exact"},{"name":"punctate palmoplantar keratoderma type 3 without elastoidosis","type":"exact"}],"termid":"MONDO:0017677","xrefs":{"Monarch":{"xref_id":"0017677"}}}


id: PBO:0039491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A14, pseudogene","termid":"PBO:0039491"}


id: PBO:0031571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_small_vegetative_cell","termid":"PBO:0031571"}


id: PBO:0073758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 12","termid":"PBO:0073758"}


id: PBO:0013752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-tRNA processing endonuclease tRNAse Z L2 Trz1","termid":"PBO:0013752"}


id: PBO:0056540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF.2 cell line derived transforming sequence","termid":"PBO:0056540"}


id: PBO:0072673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA transcription, translation and transport factor","termid":"PBO:0072673"}


id: GO:0033987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (2R,3S)-2,4',7-trihydroxyisoflavanone = daidzein + H+ + H2O, and 2-hydroxy-2,3-dihydrogenistein = genistein + H+ + H2O.","definition_xrefs":["EC:4.2.1.105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxyisoflavanone dehydratase activity","secondary_identifiers":["MetaCyc:RXN-3284"],"synonyms":[{"name":"2,7,4'-trihydroxyisoflavanone hydro-lyase (daidzein-forming) activity","type":"related"},{"name":"2,7,4'-trihydroxyisoflavanone hydro-lyase activity","type":"related"}],"termid":"GO:0033987"}


id: PR:000059628
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein rhb1 (Schizosaccharomyces pombe) that is non-covalently bound to GDP.","definition_xrefs":["PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhb1/GTP-","pombase_gene_id":"SPBC428.16c","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein rhb1, GDP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Rhb1/GTP-","type":"exact"},{"name":"Spom-rhb1/GDP+","type":"exact"}],"termid":"PR:000059628"}


id: PBO:0053749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 977","termid":"PBO:0053749"}


id: PBO:0062488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 4","termid":"PBO:0062488"}


id: GO:0043163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the cell envelope, everything external to, but not including, the cytoplasmic membrane of bacteria, encompassing the periplasmic space, cell wall, and outer membrane if present.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell envelope organization","synonyms":[{"name":"cell envelope organisation","type":"exact"},{"name":"cell envelope organization and biogenesis","type":"related"}],"termid":"GO:0043163"}


id: MONDO:0017132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary ATTR amyloidosis (obsolete MONDO:0017132)","termid":"MONDO:0017132","xrefs":{"Monarch":{"xref_id":"0017132"}}}


id: GO:1901584
data:
  {"annotated_genes":["SJAG_00922"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108353],"is_not":false,"summary":null,"term":"GO:1901584"}]},"cv_name":"molecular_function","definition":"Enables the transfer of tetrapeptide from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"tetrapeptide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901584","terms_by_termid":{"GO:1901584":null}}


id: PBO:0027509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_chromosome_condensation","termid":"PBO:0027509"}


id: GO:0070525
data:
  {"annotated_genes":["SJAG_04201","SJAG_00255","SJAG_00865","SJAG_00358","SJAG_06560","SJAG_04367","SJAG_00378","SJAG_02863","SJAG_00186","SJAG_04113","SJAG_02302","SJAG_04700","SJAG_04182"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[119019,75876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[94595,107246,117351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[76563,93126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"},{"annotations":[58914,79110,99791,101475,98611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002949"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving tRNA threonylcarbamoyladenosine, a modified nucleoside found in some tRNA molecules.","definition_xrefs":["GOC:mah","GOC:imk","PMID:19287007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA metabolic process","termid":"GO:0006399"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00255":null,"SJAG_00358":null,"SJAG_00378":null,"SJAG_00865":null,"SJAG_02302":null,"SJAG_02863":null,"SJAG_04113":null,"SJAG_04182":null,"SJAG_04201":null,"SJAG_04367":null,"SJAG_04700":null,"SJAG_06560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"t6A metabolic process","type":"exact"},{"name":"t6A metabolism","type":"exact"},{"name":"threonylcarbamoyladenosine metabolism","type":"exact"}],"termid":"GO:0070525","terms_by_termid":{"GO:0002949":null,"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:1990799":null}}


id: PATO:0000642
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being merged with another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fused with","synonyms":[{"name":"coalesced","type":"related"},{"name":"fused","type":"exact"},{"name":"fused to","type":"exact"},{"name":"joined with","type":"related"},{"name":"merged with","type":"related"}],"termid":"PATO:0000642"}


id: GO:0043482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation of coloring matter in a particular location in a cell, occurring in response to some external stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular pigmentation","termid":"GO:0033059"},{"relation_name":"is_a","term_name":"pigment accumulation","termid":"GO:0043476"},{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular pigment accumulation","termid":"GO:0043482"}


id: PBO:0061468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding factor 2 pseudogene 3","termid":"PBO:0061468"}


id: PBO:0002483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Arp42","termid":"PBO:0002483"}


id: MONDO:0004592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A contagious bacterial cutaneous infection that affects children and is usually caused by Staphylococcus aureus. It usually presents in the face with honey colored scabs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyoderma","termid":"MONDO:0002922"},{"relation_name":"is_a","term_name":"staphylococcus aureus infection","termid":"MONDO:0005545"},{"relation_name":"is_a","term_name":"skin infection","termid":"MONDO:0021201"},{"relation_name":"is_a","term_name":"streptococcal infection","termid":"MONDO:0021680"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"impetigo","secondary_identifiers":["MESH:D007169","DOID:8504","ICD10CM:L01","MEDGEN:9440","ICD9:684","SCTID:48277006","NCIT:C99088","UMLS:C0021099","icd11.foundation:971176543"],"termid":"MONDO:0004592","xrefs":{"Monarch":{"xref_id":"0004592"}}}


id: PR:O74863
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18.13 gene.","definition_xrefs":["UniProtKB:O74863","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit trm82 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.13","synonyms":[{"name":"Spom972h-SPCC18.13","type":"exact"},{"name":"transfer RNA methyltransferase 82 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74863"}


id: GO:0010008
data:
  {"annotated_genes":["SJAG_00638","SJAG_03892","SJAG_01379","SJAG_04912","SJAG_04349","SJAG_04822","SJAG_03783","SJAG_04024","SJAG_01981","SJAG_05210","SJAG_03250","SJAG_04936","SJAG_04489","SJAG_00301","SJAG_01236","SJAG_05207","SJAG_00900","SJAG_02429","SJAG_03511","SJAG_07012","SJAG_02100","SJAG_00299","SJAG_02587","SJAG_00314","SJAG_00108","SJAG_01112","SJAG_04023","SJAG_03347","SJAG_04513","SJAG_01242","SJAG_00416"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60921,72956,78452,80588,99015,102306,102318],"is_not":false,"summary":null,"term":"GO:0010008"},{"annotations":[90900],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010009"},{"annotations":[96227,100046,80693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031901"},{"annotations":[72689,88439],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000813"},{"annotations":[71378,72548,78793],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000814"},{"annotations":[76098,71467,71148,76638,78053,70409],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000815"},{"annotations":[88440,97992,101417,76505,92329,99843,78791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031902"},{"annotations":[62574,60549,119987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032585"},{"annotations":[75604,99197],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034424"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding an endosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00299":null,"SJAG_00301":null,"SJAG_00314":null,"SJAG_00416":null,"SJAG_00638":null,"SJAG_00900":null,"SJAG_01112":null,"SJAG_01236":null,"SJAG_01242":null,"SJAG_01379":null,"SJAG_01981":null,"SJAG_02100":null,"SJAG_02429":null,"SJAG_02587":null,"SJAG_03250":null,"SJAG_03347":null,"SJAG_03511":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04513":null,"SJAG_04822":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_07012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737","GO:0005768"],"is_obsolete":false,"name":"endosome membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:32109380":null},"secondary_identifiers":["NIF_Subcellular:sao978443756"],"synonyms":[{"name":"endosomal membrane","type":"exact"}],"termid":"GO:0010008","terms_by_termid":{"GO:0000813":null,"GO:0000814":null,"GO:0000815":null,"GO:0010008":null,"GO:0010009":null,"GO:0031901":null,"GO:0031902":null,"GO:0032585":null,"GO:0034424":null}}


id: GO:0005276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a vesicle membrane to the other according to the reaction: H+(in) + amino acid(out) = H+(out) + amino acid(in).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicular amino acid:proton antiporter activity (obsolete GO:0005276)","synonyms":[{"name":"hydrogen:vesicular amine antiporter activity","type":"exact"},{"name":"vesicular hydrogen:amino acid antiporter activity","type":"exact"}],"termid":"GO:0005276"}


id: PBO:0051565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 12 receptor subunit beta 2","termid":"PBO:0051565"}


id: FYPO:0000920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of aconitate hydratase (also known as aconitase) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal aconitate hydratase activity","synonyms":[{"name":"abnormal aconitase activity","type":"exact"}],"termid":"FYPO:0000920"}


id: PBO:0091495
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae HAL3","termid":"PBO:0091495"}


id: MONDO:0017134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Odonto-onycho dysplasia-alopecia syndrome is a rare, genetic ectodermal dysplasia syndrome characterized by almost total alopecia with only sparse, thin, brittle, slow-growing scalp hair, fair and sparse eyebrows and eyelashes, absent axillary and pubic hair, fragile and brittle fingernails, thick and brittle toenails (both with a subungual corneal layer), hypodontia, microdontia, widely spaced teeth with hypoplastic enamel, mild palmoplantar keratosis, cafe-au-lait spots and areolae anomalies. There have been no further descriptions in the literature since 1985.","definition_xrefs":["Orphanet:2722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"odonto-onycho dysplasia-alopecia syndrome","secondary_identifiers":["GARD:4051","MEDGEN:1648007","UMLS:C4706599"],"synonyms":[{"name":"odonto onycho dysplasia with alopecia","type":"related"}],"termid":"MONDO:0017134","xrefs":{"Monarch":{"xref_id":"0017134"}}}


id: GO:0009451
data:
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covalent alteration of one or more nucleotides within an RNA molecule to produce an RNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["ISBN:1555811337","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"},{"relation_name":"is_a","term_name":"macromolecule 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id: GO:0034638
data:
  {"annotated_genes":["SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117369],"is_not":false,"summary":null,"term":"GO:0034638"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylcholine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylcholine breakdown","type":"exact"},{"name":"phosphatidylcholine catabolism","type":"exact"},{"name":"phosphatidylcholine degradation","type":"exact"}],"termid":"GO:0034638","terms_by_termid":{"GO:0034638":null}}


id: GO:0015372
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (glutamate or aspartate)(out) + Na+(out) = (glutamate or aspartate)(in) + Na+(in).","definition_xrefs":["TC:2.A.23.1.1"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate/aspartate:sodium symporter activity (obsolete GO:0015372)","synonyms":[{"name":"glutamate/aspartate:sodium symporter activity","type":"exact"}],"termid":"GO:0015372"}


id: PBO:0078281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 14-1","termid":"PBO:0078281"}


id: PBO:0079862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC homeobox","termid":"PBO:0079862"}


id: PBO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"14-3-3 protein Rad25","termid":"PBO:0002121"}


id: PBO:0017406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, uncharacterized","termid":"PBO:0017406"}


id: PBO:0110031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP144 pseudogene 3","termid":"PBO:0110031"}


id: PBO:0003548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apm3 (predicted)","termid":"PBO:0003548"}


id: GO:0004690
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004691"}]},"cv_name":"molecular_function","definition":"cNMP-dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0004672","GO:0016740","GO:0016301","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"cyclic nucleotide-dependent protein kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0004690","terms_by_termid":{"GO:0004691":null}}


id: PBO:0085502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein co-chaperone with a zinc finger motif; essential for protein import into mitochondria; may act with Pam18p to facilitate recognition and folding of imported proteins by Ssc1p (mtHSP70) in the mitochondrial matrix; required for the maintenance of Ssc1p solubility and assists in the functional interaction of Ssc1p with substrate proteins","termid":"PBO:0085502"}


id: PBO:0078487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 7-1","termid":"PBO:0078487"}


id: GO:0050708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the controlled release of a protein from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"protein secretion","termid":"GO:0009306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of protein secretion","termid":"GO:0050708"}


id: PBO:0004451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 protease Nep1","termid":"PBO:0004451"}


id: PBO:0052308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0319 like","termid":"PBO:0052308"}


id: GO:0007309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of an axis in the oocyte. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"oocyte construction","termid":"GO:0007308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte axis specification","secondary_identifiers":["GO:0048111"],"synonyms":[{"name":"oocyte axis determination","type":"related"}],"termid":"GO:0007309"}


id: PBO:0075012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-23","termid":"PBO:0075012"}


id: PBO:0080362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 17, pseudogene","termid":"PBO:0080362"}


id: MONDO:0001301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rumination disorder is the backward flow of recently eaten food from the stomach to the mouth. The food is then re-chewed and swallowed or spat out. A non-purposeful contraction of stomach muscles is involved in rumination. It may be initially triggered by a viral illness, emotional distress, or physical injury. In many cases, no underlying trigger is identified. Behavioral therapy is the mainstay of treatment.","direct_ancestors":[{"relation_name":"is_a","term_name":"eating disorder","termid":"MONDO:0005451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rumination disorder","secondary_identifiers":["UMLS:C0154575","ICD9:307.53","MEDGEN:102311","DOID:11507","icd11.foundation:879747857","NCIT:C92567","SCTID:192014006","MESH:D019959"],"synonyms":[{"name":"psychogenic rumination","type":"exact"},{"name":"rumination","type":"exact"},{"name":"rumination syndrome","type":"related"}],"termid":"MONDO:0001301","xrefs":{"Monarch":{"xref_id":"0001301"}}}


id: PBO:0113303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA damage response and ergosterol biosynthesis; acts in cooperation with Dap1p in regulating DNA damage response and ergosterol biosynthesis","termid":"PBO:0113303"}


id: GO:0035652
data:
  {"annotated_genes":["SJAG_01381"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100042],"is_not":false,"summary":null,"term":"GO:0035652"}]},"cv_name":"biological_process","definition":"Formation of a macromolecular complex between the cytoplasmic coat proteins on clathrin-coated vesicles and proteins and/or lipoproteins that are going to be transported by a vesicle.","definition_xrefs":["GOC:lb","PMID:16162817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle cargo loading","termid":"GO:0035459"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01381":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"clathrin-coated vesicle cargo loading","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cargo loading into clathrin-coated vesicle","type":"exact"}],"termid":"GO:0035652","terms_by_termid":{"GO:0035652":null}}


id: PBO:0031080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoskeleton_organization_phenotype","termid":"PBO:0031080"}


id: PBO:0003878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex subunit Vps71","termid":"PBO:0003878"}


id: MONDO:0010078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition caused by by truncating mutations in the C-propeptide of COL2A1. Like other type II collagen disorders it is characterized by short stature, platyspondyly and epiphyseal dysplasia. A distinguishing feature is the presence of brachydactyly with a prominent first toe.","direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"},{"relation_name":"is_a","term_name":"COL2A1-related spondyloepiphyseal dysplasia","termid":"MONDO:0100602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloperipheral dysplasia","secondary_identifiers":["OMIM:271700","DOID:0112195","ICD9:758.89","NANDO:2201351","Orphanet:1856","SCTID:702339001","UMLS:C0796173","MEDGEN:163223","GARD:4994","NCIT:C135088","MESH:C535799"],"synonyms":[{"name":"spondyloperipheral dysplasia","type":"exact"},{"name":"spondyloperipheral dysplasia with short ulna","type":"related"},{"name":"spondyloperipheral dysplasia-short ulna syndrome","type":"exact"}],"termid":"MONDO:0010078","xrefs":{"Monarch":{"xref_id":"0010078"}}}


id: MONDO:0003434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glandular epithelial neoplasm that arises from the vagina and shows intestinal differentiation.","definition_xrefs":["NCIT:C40256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal glandular neoplasm","termid":"MONDO:0001704"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal adenoma","secondary_identifiers":["UMLS:C1519913","DOID:5402","MEDGEN:274377"],"synonyms":[{"name":"vagina adenoma","type":"exact"},{"name":"vaginal adenoma","type":"exact"}],"termid":"MONDO:0003434","xrefs":{"Monarch":{"xref_id":"0003434"}}}


id: PBO:0031018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_cell_cycle_phase_transition","termid":"PBO:0031018"}


id: GO:0006145
data:
  {"annotated_genes":["SJAG_01997","SJAG_05287","SJAG_04299","SJAG_04297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73869,92105],"is_not":false,"summary":null,"term":"GO:0006145"},{"annotations":[68454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006147"},{"annotations":[117751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase metabolic process","termid":"GO:0006144"},{"relation_name":"is_a","term_name":"nucleobase catabolic process","termid":"GO:0046113"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01997":null,"SJAG_04297":null,"SJAG_04299":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"purine nucleobase catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine base breakdown","type":"exact"},{"name":"purine base catabolic process","type":"exact"},{"name":"purine base catabolism","type":"exact"},{"name":"purine base degradation","type":"exact"}],"termid":"GO:0006145","terms_by_termid":{"GO:0006145":null,"GO:0006147":null,"GO:0009115":null}}


id: PBO:0000961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATPase (predicted)","termid":"PBO:0000961"}


id: PBO:0086124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for flavinylation of Sdh1p; binds to Sdh1p and promotes FAD cofactor attachment, which is necessary for succinate dehydrogenase (SDH) complex assembly and activity; mutations in human ortholog PGL2 are associated with neuroendocrine tumors (paraganglioma)","termid":"PBO:0086124"}


id: MOD:01076
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass - OBSOLETE because redundant and identical to MOD:00414. Remap to MOD:00414.","definition_xrefs":["DeltaMass:215"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01076 N-methyl arginyl (obsolete MOD:01076)","termid":"MOD:01076"}


id: MONDO:0003015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant biphasic mesothelioma (obsolete MONDO:0003015)","termid":"MONDO:0003015","xrefs":{"Monarch":{"xref_id":"0003015"}}}


id: FYPO:0000313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a germ tube with abnormal morphology (i.e. size, shape, or structure), and does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with abnormal germ tube morphology","synonyms":[{"name":"inviable after spore germination, undivided cell with abnormal germ tube morphology","type":"exact"},{"name":"inviable following spore germination, without cell division with abnormal germ tube morphology","type":"exact"},{"name":"inviable germinated spore, without cell division, with abnormal germ tube morphology","type":"exact"},{"name":"lethal after spore germination, without cell division, with abnormal germ tube morphology","type":"exact"}],"termid":"FYPO:0000313"}


id: MONDO:0003460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm characterized by the presence of glandular structures which contain clear cells and a fibrotic stroma.","definition_xrefs":["NCIT:C8987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenofibroma","termid":"MONDO:0006071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clear cell adenofibroma","secondary_identifiers":["DOID:5477","ICDO:8313/0","UMLS:C0334317","NCIT:C8985","MEDGEN:90762","MESH:D062625"],"synonyms":[{"name":"clear cell adenofibroma","type":"exact"},{"name":"clear cell adenofibroma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003460","xrefs":{"Monarch":{"xref_id":"0003460"}}}


id: GO:0004560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha-L-fucoside + H2O = an alcohol + L-fucose.","definition_xrefs":["EC:3.2.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucosidase activity","termid":"GO:0015928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"alpha-L-fucosidase activity","secondary_identifiers":["MetaCyc:ALPHA-L-FUCOSIDASE-RXN","Reactome:R-HSA-5693807","RHEA:12288"],"synonyms":[{"name":"alpha-L-fucoside fucohydrolase activity","type":"related"},{"name":"alpha-fucosidase activity","type":"related"}],"termid":"GO:0004560"}


id: PBO:0050048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, K (pseudogene)","termid":"PBO:0050048"}


id: GO:0102724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + curcumin monoglucoside = H+ + curcumin diglucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:curcumin monoglucoside glucosyltransferase activity (obsolete GO:0102724)","termid":"GO:0102724"}


id: GO:0080083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucosidic link in beta-gentiobiose.","definition_xrefs":["PMID:15604686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"beta-gentiobiose beta-glucosidase activity","termid":"GO:0080083"}


id: GO:0051615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of histamine into a cell, typically presynaptic neurons or glial cells. Histamine is a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter uptake","termid":"GO:0001504"},{"relation_name":"is_a","term_name":"histamine transport","termid":"GO:0051608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"histamine uptake","synonyms":[{"name":"histamine import","type":"exact"}],"termid":"GO:0051615"}


id: PBO:0047372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBXO3 divergent transcript","termid":"PBO:0047372"}


id: GO:0031266
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed upon binding of TRAIL to its ligand. The complex includes FADD/Mort1 and procaspase-8 addition to the ligand-bound receptor.","definition_xrefs":["PMID:12655293","PMID:12628743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death-inducing signaling complex","termid":"GO:0031264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"TRAIL death-inducing signaling complex","synonyms":[{"name":"TRAIL DISC","type":"exact"},{"name":"TRAIL death-inducing signalling complex","type":"exact"}],"termid":"GO:0031266"}


id: GO:0050088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol 1-phosphate + NADP+ = D-mannose 6-phosphate + 3 H+ + NADPH.","definition_xrefs":["RHEA:14925","EC:1.1.1.224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mannose-6-phosphate 6-reductase activity","secondary_identifiers":["MetaCyc:MANNOSE-6-PHOSPHATE-6-REDUCTASE-RXN","KEGG_REACTION:R01817"],"synonyms":[{"name":"6-phosphomannose reductase activity","type":"related"},{"name":"D-mannitol-1-phosphate:NADP+ 6-oxidoreductase activity","type":"related"},{"name":"NADP-dependent mannose-6-P:mannitol-1-P oxidoreductase activity","type":"related"},{"name":"NADPH-dependent M6P reductase activity","type":"related"},{"name":"NADPH-dependent mannose 6-phosphate reductase activity","type":"related"},{"name":"NADPH-mannose-6-P reductase activity","type":"related"},{"name":"mannose-6-phosphate reductase activity","type":"related"}],"termid":"GO:0050088"}


id: PBO:0114418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACER antisense RNA 1","termid":"PBO:0114418"}


id: MONDO:0018827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of Chilblain lupus that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin vascular disease","termid":"MONDO:0019293"},{"relation_name":"is_a","term_name":"chilblain lupus","termid":"MONDO:0019557"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"},{"relation_name":"is_a","term_name":"type 1 interferonopathy of childhood","termid":"MONDO:0957408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"familial chilblain lupus","secondary_identifiers":["OMIMPS:610448","MEDGEN:1807766","Orphanet:481662","GARD:17874","UMLS:C5688224"],"synonyms":[{"name":"hereditary Chilblain lupus","type":"exact"},{"name":"hereditary chilblain lupus","type":"exact"}],"termid":"MONDO:0018827","xrefs":{"Monarch":{"xref_id":"0018827"}}}


id: PBO:0074640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 32","termid":"PBO:0074640"}


id: PBO:0062529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily U member 9","termid":"PBO:0062529"}


id: GO:0006396
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