# terms

id: PBO:0043606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen like tail subunit of asymmetric acetylcholinesterase","termid":"PBO:0043606"}


id: PBO:0000964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inorganic diphosphatase (predicted)","termid":"PBO:0000964"}


id: GO:1990650
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108668],"is_not":false,"summary":null,"term":"GO:1990650"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 2,4,5,6-tetrakisphosphate + H2O = 1D-myo-inositol 2,4,6-trisphosphate + phosphate.","definition_xrefs":["PMID:15316017","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"inositol-2,4,5,6-tetrakisphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990650","terms_by_termid":{"GO:1990650":null}}


id: GO:1905250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of memory.","definition_xrefs":["PMID:25905804","GO_REF:0000058","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of memory (obsolete GO:1905250)","synonyms":[{"name":"enhancement of memory","type":"narrow"}],"termid":"GO:1905250"}


id: PBO:0046207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin B pseudogene 4","termid":"PBO:0046207"}


id: FYPO:0007986
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during mitotic interphase in which the localization of a protein to the microtubule overlap of cytoplasmic microtubule bundles is decreased.","definition_xrefs":["PMID:19879140","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to interphase microtubule","termid":"FYPO:0006182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to interphase microtubule bundle overlap","termid":"FYPO:0007986"}


id: GO:0071910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the liver with respect to the left and right halves of the organism.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"liver development","termid":"GO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of liver left/right asymmetry","termid":"GO:0071910"}


id: PBO:0063389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 6","termid":"PBO:0063389"}


id: PBO:0087497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Elongator complex; binds to microtubules via conserved alkaline residues; has two seven-bladed WD40 &#946; propellers; Elongator complex is required for modification of wobble nucleosides in tRNA; target of Kluyveromyces lactis zymocin","termid":"PBO:0087497"}


id: PBO:0042311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 pseudogene 5","termid":"PBO:0042311"}


id: MONDO:0018628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"virus associated tumor","termid":"MONDO:0017341"},{"relation_name":"is_a","term_name":"AIDS-related disorder","termid":"MONDO:0024571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"HIV-associated cancer","secondary_identifiers":["NCIT:C4046","UMLS:C5680059","Orphanet:443291","GARD:21857","MEDGEN:1843219"],"synonyms":[{"name":"HIV-related cancer","type":"exact"}],"termid":"MONDO:0018628","xrefs":{"Monarch":{"xref_id":"0018628"}}}


id: PBO:0080939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc activated ion channel pseudogene 1","termid":"PBO:0080939"}


id: FYPO:0002646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during mitosis.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein serine phosphorylation during mitosis (obsolete FYPO:0002646)","synonyms":[{"name":"decreased peptidyl-serine phosphorylation during mitosis","type":"exact"},{"name":"decreased protein serine phosphorylation during M phase during mitotic cell cycle","type":"related"},{"name":"decreased protein serine phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation during mitotic M phase","type":"related"},{"name":"decreased serine phosphorylation during mitosis","type":"exact"},{"name":"reduced protein serine phosphorylation during mitosis","type":"exact"}],"termid":"FYPO:0002646"}


id: PBO:0090322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, phospholipid-intermembrane transfer protein Spo20/Sec14","termid":"PBO:0090322"}


id: GO:0043114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which blood vessels can be pervaded by fluid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular permeability","termid":"GO:0043114"}


id: PBO:0061465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding factor 2","termid":"PBO:0061465"}


id: PBO:0030487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_malonic_acid_import","termid":"PBO:0030487"}


id: PBO:0057782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2909","termid":"PBO:0057782"}


id: PBO:0050140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 50","termid":"PBO:0050140"}


id: MONDO:0004103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of papillary carcinoma of the thyroid gland characterized by the presence of tall malignant follicular cells, arranged in papillary and trabecular patterns. Necrotic changes and high mitotic activity are present.","definition_xrefs":["NCIT:C35558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland papillary carcinoma","termid":"MONDO:0005075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"tall cell variant thyroid gland papillary carcinoma","secondary_identifiers":["DOID:7089","UMLS:C1336695","MEDGEN:234416"],"synonyms":[{"name":"tall cell variant papillary carcinoma","type":"exact"},{"name":"tall cell variant thyroid gland papillary carcinoma","type":"exact"}],"termid":"MONDO:0004103","xrefs":{"Monarch":{"xref_id":"0004103"}}}


id: GO:1900368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of post-transcriptional gene silencing by a non-coding RNA.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:22412382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing","termid":"GO:0060147"},{"relation_name":"is_a","term_name":"regulation of gene silencing by regulatory ncRNA","termid":"GO:0060966"},{"relation_name":"regulates","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of post-transcriptional gene silencing by regulatory ncRNA","synonyms":[{"name":"regulation of PTGS","type":"exact"},{"name":"regulation of RNA interference","type":"exact"},{"name":"regulation of RNAi","type":"exact"},{"name":"regulation of post-transcriptional gene silencing by RNA","type":"related"},{"name":"regulation of post-transcriptional gene silencing by ncRNA","type":"related"}],"termid":"GO:1900368"}


id: GO:0038183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by bile acid binding to its receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:36409000","PMID:12016314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"bile acid signaling pathway","termid":"GO:0038183"}


id: GO:1905337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aggrephagy.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:pad","GOC:TermGenie","PMID:25686248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"regulation of aggrephagy","termid":"GO:1905335"},{"relation_name":"positively_regulates","term_name":"aggrephagy","termid":"GO:0035973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"positive regulation of aggrephagy","synonyms":[{"name":"activation of aggrephagy","type":"narrow"},{"name":"up regulation of aggrephagy","type":"exact"},{"name":"up-regulation of aggrephagy","type":"exact"},{"name":"upregulation of aggrephagy","type":"exact"}],"termid":"GO:1905337"}


id: PBO:0063823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PH domain and leucine rich repeat protein phosphatase 2","termid":"PBO:0063823"}


id: FYPO:0001755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize lysine or cysteine, and therefore requires lysine and cysteine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth auxotrophic for cysteine","termid":"FYPO:0000037"},{"relation_name":"is_a","term_name":"growth auxotrophic for lysine","termid":"FYPO:0000039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for lysine and cysteine","synonyms":[{"name":"growth auxotrophic for lysine and cysteine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for lysine and cysteine during vegetative growth","type":"exact"},{"name":"lysine and cysteine auxotrophy","type":"exact"}],"termid":"FYPO:0001755"}


id: MONDO:0009042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniotelencephalic dysplasia is an extremely rare, genetic developmental defect during embryogenesis syndrome characterized by craniosynostosis with frontal encephalocele and various additional brain anomalies (severe hydrocephalus, agenesis of the corpus callosum, lissencephaly and polymicrogyria, parenchymal cysts, septo-optic dysplasia) resulting in marked cerebral dysfunction, seizures and very severe psychomotor delay. There have been no further descriptions in the literature since 1983.","definition_xrefs":["Orphanet:1528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"},{"relation_name":"is_a","term_name":"lissencephaly spectrum disorders","termid":"MONDO:0018838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0002320"],"is_obsolete":false,"name":"craniotelencephalic dysplasia","secondary_identifiers":["UMLS:C1857471","MESH:C535597","icd11.foundation:1684038717","MEDGEN:347462","OMIM:218670","SCTID:715422002","GARD:1605"],"synonyms":[{"name":"Complex of anomalies involving the cranium and brain","type":"related"},{"name":"craniotelencephalic dysplasia","type":"exact"}],"termid":"MONDO:0009042","xrefs":{"Monarch":{"xref_id":"0009042"}}}


id: GO:0098850
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the synaptic vesicle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"synaptic vesicle membrane","termid":"GO:0030672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of synaptic vesicle membrane","termid":"GO:0098850"}


id: GO:0102643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: scalarane-17alpha-19-diol = all-trans-geranylfarnesol + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete scalarane-17alpha-19-diol synthase activity (obsolete GO:0102643)","termid":"GO:0102643"}


id: GO:0003132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from mesodermal cells to endodermal cells that contributes to heart induction.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal-endodermal cell signaling","termid":"GO:0003131"},{"relation_name":"part_of","term_name":"heart induction","termid":"GO:0003129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mesodermal-endodermal cell signaling involved in heart induction","synonyms":[{"name":"mesodermal-endodermal cell signalling involved in heart induction","type":"exact"}],"termid":"GO:0003132"}


id: PBO:0086782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and seamless-GFP fusion proteins localize to the endoplasmic reticulum, while the mCherry fusion protein localizes to the vacuole","termid":"PBO:0086782"}


id: GO:0086040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a cardiac muscle cell membrane to the other according to the reaction: Na+(out) + H+(in) = Na+(in) + H+(out). This transfer contributes to the regulation of the cardiac muscle cell plasma membrane potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium:proton antiporter activity","termid":"GO:0015385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"sodium:proton antiporter activity involved in regulation of cardiac muscle cell membrane potential","synonyms":[{"name":"sodium:hydrogen antiporter activity involved in regulation of cardiac muscle cell membrane potential","type":"exact"}],"termid":"GO:0086040"}


id: GO:0071091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha1-beta1 integrin complex bound to tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha1-beta1 integrin-tissue transglutaminase complex","synonyms":[{"name":"ITGA1-ITGB1-TGM2 complex","type":"narrow"}],"termid":"GO:0071091"}


id: FYPO:0001561
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-citrulline measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular citrulline level","synonyms":[{"name":"decreased cellular L-citrulline level","type":"exact"},{"name":"decreased cellular citrulline level during mitotic cell cycle","type":"related"},{"name":"decreased cellular citrulline level during vegetative growth","type":"exact"},{"name":"decreased citrulline accumulation","type":"related"},{"name":"reduced cellular citrulline level","type":"exact"}],"termid":"FYPO:0001561"}


id: PBO:0003886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S9 (predicted)","termid":"PBO:0003886"}


id: PBO:0045305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNMBP antisense RNA 1","termid":"PBO:0045305"}


id: GO:0045803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the organization, biogenesis or maintenance of the cytoskeleton.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytoskeleton (obsolete GO:0045803)","synonyms":[{"name":"positive regulation of cytoskeleton","type":"exact"}],"termid":"GO:0045803"}


id: GO:0075033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont partition is formed to separate the appressorium from the germination tube, occurring during appressorium formation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete appressorium septum formation (obsolete GO:0075033)","synonyms":[{"name":"septum formation during appressorium formation on or near host","type":"related"},{"name":"septum formation involved in appressorium formation","type":"exact"},{"name":"septum formation involved in appressorium formation on or near host","type":"exact"}],"termid":"GO:0075033"}


id: PBO:0081029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 11A","termid":"PBO:0081029"}


id: MONDO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mycosis that involves the integument and its appendages, including hair and nails. Infection may involve the stratum corneum or deeper layers of the epidermis.","direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutaneous mycosis","secondary_identifiers":["SCTID:14560005","DOID:0050134"],"termid":"MONDO:0000254","xrefs":{"Monarch":{"xref_id":"0000254"}}}


id: MONDO:0004360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma arising from the breast tissue.","definition_xrefs":["NCIT:C5189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast sarcoma","termid":"MONDO:0002490"},{"relation_name":"is_a","term_name":"extraosseous osteosarcoma","termid":"MONDO:0002621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast extraskeletal osteosarcoma","secondary_identifiers":["MEDGEN:235414","UMLS:C1335149","DOID:7787"],"synonyms":[{"name":"breast extraskeletal osteosarcoma","type":"exact"},{"name":"breast osteosarcoma","type":"exact"},{"name":"breast osteosarcoma (disease)","type":"exact"},{"name":"osteogenic breast sarcoma","type":"exact"},{"name":"osteogenic sarcoma of breast","type":"exact"},{"name":"osteogenic sarcoma of the breast","type":"exact"},{"name":"osteosarcoma of breast","type":"exact"},{"name":"osteosarcoma of the breast","type":"exact"}],"termid":"MONDO:0004360","xrefs":{"Monarch":{"xref_id":"0004360"}}}


id: PBO:0045135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 4","termid":"PBO:0045135"}


id: GO:0016578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by removal of ubiquitin groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone deubiquitination (obsolete GO:0016578)","synonyms":[{"name":"histone deubiquitinylation","type":"exact"},{"name":"histone deubiquitylation","type":"exact"}],"termid":"GO:0016578"}


id: PBO:0062154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 4 pseudogene","termid":"PBO:0062154"}


id: FYPO:0000390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which traversing the start control point of the mitotic cell cycle begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"premature passage through START of mitotic cell cycle","synonyms":[{"name":"advanced passage through START of mitotic cell cycle","type":"exact"},{"name":"cell cycle passage through START: increased rate","type":"related"},{"name":"premature mitotic cell cycle passage through START","type":"exact"},{"name":"premature passage through START of mitotic cell cycle during vegetative growth","type":"exact"}],"termid":"FYPO:0000390"}


id: PBO:0033757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_spindle_pole_body_duplication","termid":"PBO:0033757"}


id: PBO:0048733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate dehydrogenase 1 pseudogene 4","termid":"PBO:0048733"}


id: GO:0120241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the hydrolytic deamination of imine intermediates formed by several types of pyridoxal-5'-phosphate-dependent dehydratases, such as EC 4.3.1.19 and EC 4.3.1.17.","definition_xrefs":["EC:3.5.99.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"2-iminobutanoate/2-iminopropanoate deaminase","synonyms":[{"name":"2-iminobutanoate deaminase","type":"narrow"},{"name":"2-iminopropanoate deaminase","type":"narrow"},{"name":"enamine/imine deaminase","type":"broad"},{"name":"imine intermediate deaminase activity","type":"related"}],"termid":"GO:0120241"}


id: MONDO:0011039
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrophia maculosa varioliformis cutis, familial","secondary_identifiers":["OMIM:601341","UMLS:C1832465","MESH:C563349","MEDGEN:371334"],"synonyms":[{"name":"AMVC","type":"related"},{"name":"atrophia MACULOSA VARIOLIFORMIS cutis, familial","type":"related"},{"name":"atrophia maculosa varioliformis cutis, familial","type":"exact"},{"name":"varioliform macular atrophy of the skin","type":"related"}],"termid":"MONDO:0011039","xrefs":{"Monarch":{"xref_id":"0011039"}}}


id: MOD:00243
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-serine residue to form L-cysteine oxazole-4-carboxylic acid.","definition_xrefs":["PubMed:8895467","RESID:AA0238","PubMed:8183941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Ser)","termid":"MOD:01421"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine oxazole-4-carboxylic acid","synonyms":[{"name":"2-(1-azanyl-2-sulfanylethyl)-4-oxazolecarboxylic acid","type":"exact"},{"name":"2-[(1R)-1-amino-2-sulfanylethyl]-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Oxazole-4-carboxylic acid (Cys-Ser)","type":"exact"},{"name":"L-cysteine oxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00243"}


id: FYPO:0004220
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which monomethylation of lysine at position 20 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone methylation during vegetative growth","termid":"FYPO:0000861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H4-K20 monomethylation during vegetative growth","synonyms":[{"name":"normal histone H4 K20 monomethylation during vegetative growth","type":"exact"},{"name":"normal histone H4-K20 monomethylation during mitotic cell cycle","type":"related"},{"name":"normal histone H4K20me1 during vegetative growth","type":"exact"},{"name":"normal histone lysine H4 K20 monomethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004220"}


id: GO:0007220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of successive proteolytic cleavages of the Notch protein, which result in an active form of the receptor.","definition_xrefs":["PMID:12651094","PMID:14986688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Notch receptor processing","synonyms":[{"name":"N receptor processing","type":"exact"}],"termid":"GO:0007220"}


id: PR:O94457
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg31 gene.","definition_xrefs":["UniProtKB:O94457","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta(7)-sterol 5(6)-desaturase erg31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.16c","synonyms":[{"name":"C-5 sterol desaturase erg31 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-erg31","type":"exact"},{"name":"ergosterol Delta(5,6) desaturase erg31 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ergosterol biosynthesis protein 31 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sterol-C5-desaturase erg31 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94457"}


id: GO:0034244
data:
  {"annotated_genes":["SJAG_01707"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118329],"is_not":false,"summary":null,"term":"GO:0034244"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription, elongation","termid":"GO:0032785"},{"relation_name":"is_a","term_name":"regulation of transcription elongation by RNA polymerase II","termid":"GO:0034243"},{"relation_name":"negatively_regulates","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01707":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"negative regulation of transcription elongation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090041"],"synonyms":[{"name":"negative regulation of RNA elongation from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of gene-specific transcription elongation from RNA polymerase II promoter","type":"related"},{"name":"negative regulation of transcription elongation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0034244","terms_by_termid":{"GO:0034244":null}}


id: PBO:0011512
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.64","termid":"PBO:0011512"}


id: PBO:0071331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 8","termid":"PBO:0071331"}


id: MONDO:0000278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Bolivian hemorrhagic fever (obsolete MONDO:0000278)","termid":"MONDO:0000278","xrefs":{"Monarch":{"xref_id":"0000278"}}}


id: PBO:0109935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mov10 RNA helicase","termid":"PBO:0109935"}


id: MONDO:1010410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy that occurs in white-tufted-ear marmoset.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, non-human animal","termid":"MONDO:1010001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, white-tufted-ear marmoset","secondary_identifiers":["OMIA:000344-9483"],"termid":"MONDO:1010410","xrefs":{"Monarch":{"xref_id":"1010410"}}}


id: GO:0043111
data:
  {"annotated_genes":["SJAG_04855","SJAG_04671","SJAG_02724","SJAG_03097","SJAG_03997","SJAG_00247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103569],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[108883,99694,103570,106999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[115411,99695,102617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[99696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[102618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA replication by impeding the progress of the DNA replication fork. Replication fork arrest is one of the 'quality control' processes ensuring that DNA-dependent DNA replication occurs correctly. DNA replication fork arrest during DNA-dependent DNA replication is not known to occur outside of cases where a replication error needs to be prevented or corrected.","definition_xrefs":["GOC:jl","GOC:pr","PMID:14645529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication maintenance of fidelity","termid":"GO:0045005"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication","termid":"GO:2000104"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02724":null,"SJAG_03097":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"replication fork arrest","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of DNA replication at replication fork barrier","type":"exact"},{"name":"replication fork blocking","type":"exact"},{"name":"replication fork stalling","type":"exact"}],"termid":"GO:0043111","terms_by_termid":{"GO:0011000":null,"GO:0031582":null,"GO:0071807":null,"GO:0090001":null,"GO:1902681":null}}


id: GO:1902952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendritic spine maintenance.","definition_xrefs":["GOC:sjp","GOC:TermGenie","PMID:24328732","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"regulation of dendritic spine maintenance","termid":"GO:1902950"},{"relation_name":"positively_regulates","term_name":"dendritic spine maintenance","termid":"GO:0097062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic spine maintenance","synonyms":[{"name":"activation of dendritic spine maintenance","type":"narrow"},{"name":"up regulation of dendritic spine maintenance","type":"exact"},{"name":"up-regulation of dendritic spine maintenance","type":"exact"},{"name":"upregulation of dendritic spine maintenance","type":"exact"}],"termid":"GO:1902952"}


id: PBO:0051704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase D","termid":"PBO:0051704"}


id: PBO:0058687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6815","termid":"PBO:0058687"}


id: MONDO:0017100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neutropenia-monocytopenia-deafness syndrome is characterized by neutropenia with myeloid marrow hypoplasia, monocytopenia, and congenital deafness. It has been described in three siblings who suffered recurrent bacterial infections.","definition_xrefs":["Orphanet:2690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"neutropenia-monocytopenia-deafness syndrome","secondary_identifiers":["GARD:3982","UMLS:C4518430","MEDGEN:1383523"],"termid":"MONDO:0017100","xrefs":{"Monarch":{"xref_id":"0017100"}}}


id: GO:0015195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-threonine from one side of a membrane to the other. L-threonine is (2R*,3S*)-2-amino-3-hydroxybutanoic acid.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-threonine transmembrane transporter activity","secondary_identifiers":["GO:0015512"],"synonyms":[{"name":"L-threonine permease activity","type":"related"},{"name":"L-threonine transporter activity","type":"broad"},{"name":"threonine/serine:sodium symporter activity","type":"related"}],"termid":"GO:0015195"}


id: PBO:0085601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cell separation during budding; one of two S. cerevisiae homologs (Sds23p and Sds24p) of the S. pombe Sds23 protein, which is implicated in APC/cyclosome regulation; SDS23 has a paralog, SDS24, that arose from the whole genome duplication","termid":"PBO:0085601"}


id: PBO:0052097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel modulatory factor 1","termid":"PBO:0052097"}


id: GO:0160129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cross-link between a protein and a DNA abasic site, forming a thiazolidine linkage between a DNA ring-opened abasic site and the alpha-amino and sulfhydryl substituents of cysteine residue of the protein.","definition_xrefs":["PMID:31235913","PMID:30554877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"protein-DNA covalent cross-linking activity","secondary_identifiers":["MetaCyc:RXN-21016"],"termid":"GO:0160129"}


id: GO:0051552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving flavones, a class of pigmented plant compounds based on 2-phenyl-4H-1-benzopyran-4-one (2-phenylchromone).","definition_xrefs":["PMID:18567791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavone metabolic process","synonyms":[{"name":"2-phenyl-4H-1-benzopyran-4-one metabolic process","type":"narrow"},{"name":"2-phenyl-4H-1-benzopyran-4-one metabolism","type":"narrow"},{"name":"2-phenylchromone metabolic process","type":"narrow"},{"name":"2-phenylchromone metabolism","type":"narrow"},{"name":"flavone metabolism","type":"exact"}],"termid":"GO:0051552"}


id: PBO:0005635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein Mrp49 (predicted)","termid":"PBO:0005635"}


id: MOD:01913
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of an L-tryptophan residue with one chlorine atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated tryptophan","termid":"MOD:01068"},{"relation_name":"is_a","term_name":"monochlorinated residue","termid":"MOD:01911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monochlorinated L-tryptophan","synonyms":[{"name":"Cl1Trp","type":"exact"}],"termid":"MOD:01913"}


id: MONDO:0010535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bazex-Dupre-Christol syndrome is a rare genodermatosis (hereditary skin disease) with a predisposition to early-onset basal cell carcinomas.","definition_xrefs":["Orphanet:113"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited skin tumor (obsolete MONDO:0015950)","termid":"MONDO:0015950"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"excluded_subClassOf","term_name":"obsolete malignant tumor of palpebral epidermis (obsolete MONDO:0020175)","termid":"MONDO:0020175"},{"relation_name":"excluded_subClassOf","term_name":"obsolete congenital absence of the eyebrow/eyelashes (obsolete MONDO:0020188)","termid":"MONDO:0020188"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Bazex-Dupre-Christol syndrome","secondary_identifiers":["Orphanet:166113","GARD:838","ICD9:757.39","MEDGEN:87539","UMLS:C0346104","SCTID:238640007","OMIM:301845","SCTID:254820002"],"synonyms":[{"name":"BDCS","type":"exact"},{"name":"BZX","type":"related"},{"name":"Bazex syndrome","type":"exact"},{"name":"Bazex syndrome, X-linked dominant","type":"exact"},{"name":"Bazex-Dupre-Christol syndrome","type":"exact"},{"name":"Bazex-Dupré-Christol syndrome","type":"exact"},{"name":"acrokeratosis of Bazex","type":"exact"},{"name":"acrokeratosis paraneoplastica","type":"exact"},{"name":"acrokeratosis paraneoplastica of Bazex","type":"exact"},{"name":"follicular atrophoderma and basal cell carcinomas","type":"exact"},{"name":"follicular atrophoderma-basal cell carcinoma syndrome","type":"related"},{"name":"follicular atrophoderma-basocellular proliferations-hypotrichosis syndrome","type":"related"}],"termid":"MONDO:0010535","xrefs":{"Monarch":{"xref_id":"0010535"}}}


id: PBO:0029359
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_dATP_level","termid":"PBO:0029359"}


id: PBO:0081427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 281","termid":"PBO:0081427"}


id: PBO:0079454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor candidate 7","termid":"PBO:0079454"}


id: GO:1902671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a left anterior flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["PMID:16607022","PMID:5961344","GOC:TermGenie","GOC:giardia","GO_REF:0000064","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"left anterior flagellum","termid":"GO:0097554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"left anterior basal body","synonyms":[{"name":"cilial basal body of left anterior cilium","type":"exact"},{"name":"cilial basal body of left anterior flagellum","type":"exact"},{"name":"ciliary basal body of left anterior cilium","type":"exact"},{"name":"ciliary basal body of left anterior flagellum","type":"exact"},{"name":"cilium basal body of left anterior cilium","type":"exact"},{"name":"cilium basal body of left anterior flagellum","type":"exact"},{"name":"left anterior flagellum ciliary basal body","type":"exact"},{"name":"microtubule basal body of left anterior cilium","type":"exact"},{"name":"microtubule basal body of left anterior flagellum","type":"exact"}],"termid":"GO:1902671"}


id: PBO:0075937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilin 2","termid":"PBO:0075937"}


id: MONDO:0013587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that affects how the body breaks down sugar to use as energy in muscle cells. Unlike people with lactate dehydrogenase A deficiency, people with this condition typically do not have any signs or symptoms. It is unclear why this condition does not cause any health problems. Affected people are usually diagnosed when routine blood tests reveal reduced activity of the enzyme lactate dehydrogenase. LDHBD is caused by mutations in the LDHB gene and is inherited in an autosomal recessive manner.","definition_xrefs":["GARD:0003161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to lactate dehydrogenase deficiency","termid":"MONDO:0016527"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"glycogen storage disease due to lactate dehydrogenase H-subunit deficiency","secondary_identifiers":["Orphanet:284435","GARD:3161","MESH:C563641","UMLS:C3279904","MEDGEN:481534","OMIM:614128"],"synonyms":[{"name":"GSD due to lactate dehydrogenase H-subunit deficiency","type":"exact"},{"name":"LDH deficiency B","type":"related"},{"name":"LDH-H subunit deficiency","type":"exact"},{"name":"LDHBD","type":"related"},{"name":"glycogenosis due to lactate dehydrogenase H-subunit deficiency","type":"exact"},{"name":"lactate dehydrogenase B deficiency","type":"exact"},{"name":"lactate dehydrogenase deficiency type B","type":"related"},{"name":"lactate dehydrogenase-B deficiency","type":"exact"}],"termid":"MONDO:0013587","xrefs":{"Monarch":{"xref_id":"0013587"}}}


id: GO:1900470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylserine biosynthetic process.","definition_xrefs":["PMID:8056324","GOC:dgf","GOC:TermGenie","PMID:8614637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"is_a","term_name":"positive regulation of phosphatidylserine metabolic process","termid":"GO:0150179"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine biosynthetic process","termid":"GO:1900468"},{"relation_name":"positively_regulates","term_name":"phosphatidylserine biosynthetic process","termid":"GO:0006659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of phosphatidylserine biosynthetic process","synonyms":[{"name":"activation of phosphatidylserine anabolism","type":"exact"},{"name":"activation of phosphatidylserine biosynthesis","type":"exact"},{"name":"activation of phosphatidylserine biosynthetic process","type":"narrow"},{"name":"activation of phosphatidylserine formation","type":"exact"},{"name":"activation of phosphatidylserine synthesis","type":"exact"},{"name":"positive regulation of phosphatidylserine anabolism","type":"exact"},{"name":"positive regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"positive regulation of phosphatidylserine formation","type":"exact"},{"name":"positive regulation of phosphatidylserine synthesis","type":"exact"},{"name":"up regulation of phosphatidylserine anabolism","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"up regulation of phosphatidylserine formation","type":"exact"},{"name":"up regulation of phosphatidylserine synthesis","type":"exact"},{"name":"up-regulation of phosphatidylserine anabolism","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"up-regulation of phosphatidylserine formation","type":"exact"},{"name":"up-regulation of phosphatidylserine synthesis","type":"exact"},{"name":"upregulation of phosphatidylserine anabolism","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"upregulation of phosphatidylserine formation","type":"exact"},{"name":"upregulation of phosphatidylserine synthesis","type":"exact"}],"termid":"GO:1900470"}


id: RO:0003311
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  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a condition (a phenotype or disease) and an entity (e.g. a chemical, environmental exposure, or some form of genetic variation) where some or all aspects of the condition are worsened by the presence of the entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition_exacerbated_by","termid":"RO:0003311"}


id: PBO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smd2","termid":"PBO:0002443"}


id: PBO:0081219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc metallopeptidase STE24","termid":"PBO:0081219"}


id: PBO:0038677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 3","termid":"PBO:0038677"}


id: PBO:0060721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A9","termid":"PBO:0060721"}


id: PBO:0017440
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_transcription_of","termid":"PBO:0017440"}


id: FYPO:0000934
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the microtubule cytoskeleton does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"},{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"abolished protein localisation to microtubule cytoskeleton during vegetative growth","type":"exact"},{"name":"abolished protein localization to microtubule cytoskeleton during mitotic cell cycle","type":"related"},{"name":"protein absent from microtubule cytoskeleton during vegetative growth","type":"related"},{"name":"protein localization to microtubule cytoskeleton abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000934"}


id: MOD:00477
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts, by oxidative decarboxylation, an L-proline residue to 2-pyrrolidone with breakage of the peptide chain.","definition_xrefs":["PubMed:9252331","PubMed:2161657","Unimod:360#P"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrogenated residue","termid":"MOD:00683"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"decarboxylated residue","termid":"MOD:00960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-pyrrolidone","synonyms":[{"name":"Pro->Pyrrolidinone","type":"related"},{"name":"Proline oxidation to pyrrolidinone","type":"related"}],"termid":"MOD:00477"}


id: PBO:0082189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alcohol dehydrogenase isoenzyme V; involved in ethanol production; ADH5 has a paralog, ADH1, that arose from the whole genome duplication","termid":"PBO:0082189"}


id: PBO:0045948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal growth factor","termid":"PBO:0045948"}


id: GO:0001095
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a general RNA polymerase II transcription factor belonging to the TFIIE complex, one of the factors involved in formation of the preinitiation complex (PIC) by RNA polymerase II.","definition_xrefs":["GOC:krc","PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II general transcription initiation factor binding","termid":"GO:0001091"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"TFIIE-class transcription factor complex binding","synonyms":[{"name":"TFIIE-class transcription factor binding","type":"exact"}],"termid":"GO:0001095"}


id: FYPO:0003612
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which cells in a population of spores are viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable cell population","termid":"FYPO:0002058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"viable spore population","synonyms":[{"name":"viable population of spores","type":"exact"}],"termid":"FYPO:0003612"}


id: PBO:0027070
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcription_phenotype","termid":"PBO:0027070"}


id: GO:0055085
data:
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transport","type":"exact"}],"termid":"GO:0055085","terms_by_termid":{"GO:0001407":null,"GO:0003333":null,"GO:0006616":null,"GO:0006843":null,"GO:0006847":null,"GO:0006850":null,"GO:0008645":null,"GO:0015786":null,"GO:0015790":null,"GO:0015813":null,"GO:0016031":null,"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0030150":null,"GO:0031204":null,"GO:0032974":null,"GO:0034219":null,"GO:0034220":null,"GO:0034486":null,"GO:0034488":null,"GO:0034490":null,"GO:0034755":null,"GO:0035348":null,"GO:0035432":null,"GO:0035434":null,"GO:0035435":null,"GO:0035436":null,"GO:0035442":null,"GO:0035524":null,"GO:0035725":null,"GO:0036085":null,"GO:0036246":null,"GO:0036249":null,"GO:0036376":null,"GO:0036444":null,"GO:0045016":null,"GO:0045041":null,"GO:0046323":null,"GO:0048250":null,"GO:0055085":null,"GO:0060003":null,"GO:0061454":null,"GO:0061856":null,"GO:0070574":null,"GO:0070588":null,"GO:0070778":null,"GO:0071421":null,"GO:0071423":null,"GO:0071577":null,"GO:0071578":null,"GO:0071805":null,"GO:0071806":null,"GO:0071918":null,"GO:0071934":null,"GO:0071996":null,"GO:0072334":null,"GO:0072488":null,"GO:0072489":null,"GO:0089707":null,"GO:0089708":null,"GO:0090374":null,"GO:0090513":null,"GO:0090514":null,"GO:0090515":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0090539":null,"GO:0097430":null,"GO:0097623":null,"GO:0097624":null,"GO:0097638":null,"GO:0097639":null,"GO:0098655":null,"GO:0098656":null,"GO:0098661":null,"GO:0098702":null,"GO:0098703":null,"GO:0098705":null,"GO:0098708":null,"GO:0098709":null,"GO:0098710":null,"GO:0098711":null,"GO:0098714":null,"GO:0098715":null,"GO:0098716":null,"GO:0098717":null,"GO:0098720":null,"GO:0098721":null,"GO:0106081":null,"GO:0106082":null,"GO:0120029":null,"GO:0120112":null,"GO:0140021":null,"GO:0140115":null,"GO:0140116":null,"GO:0140125":null,"GO:0140140":null,"GO:0140141":null,"GO:0140146":null,"GO:0140147":null,"GO:0140159":null,"GO:0140206":null,"GO:0140207":null,"GO:0140209":null,"GO:0140270":null,"GO:0140300":null,"GO:0140425":null,"GO:0140466":null,"GO:0160007":null,"GO:0160203":null,"GO:0160256":null,"GO:0170036":null,"GO:0170046":null,"GO:0180029":null,"GO:0180042":null,"GO:1901553":null,"GO:1901583":null,"GO:1902047":null,"GO:1902267":null,"GO:1902358":null,"GO:1902434":null,"GO:1902475":null,"GO:1902476":null,"GO:1902600":null,"GO:1903090":null,"GO:1903091":null,"GO:1903092":null,"GO:1903710":null,"GO:1903711":null,"GO:1903712":null,"GO:1903714":null,"GO:1903790":null,"GO:1903826":null,"GO:1903830":null,"GO:1904082":null,"GO:1904257":null,"GO:1904679":null,"GO:1904983":null,"GO:1905039":null,"GO:1905135":null,"GO:1905136":null,"GO:1905530":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1905647":null,"GO:1905665":null,"GO:1905949":null,"GO:1990519":null,"GO:1990536":null,"GO:1990542":null,"GO:1990543":null,"GO:1990544":null,"GO:1990545":null,"GO:1990547":null,"GO:1990548":null,"GO:1990549":null,"GO:1990550":null,"GO:1990553":null,"GO:1990554":null,"GO:1990555":null,"GO:1990556":null,"GO:1990557":null,"GO:1990559":null,"GO:1990569":null,"GO:1990570":null,"GO:1990573":null,"GO:1990575":null,"GO:1990591":null,"GO:1990616":null,"GO:1990818":null,"GO:1990822":null,"GO:1990961":null,"GO:2000185":null}}


id: PBO:0074230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 46 member 3","termid":"PBO:0074230"}


id: MONDO:0971058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare bacterial infectious disease characterized by development of endothelial cell-derived, blood-filled tumors on the surface of the skin during the chronic phase of infection with Bartonella bacilliformis. The lesions can persist for months to years and may cause pain and scarring due to ulceration. They are classified as miliary (multiple red papules of <3 mm in diameter), mular (blood-filled nodules), and diffuse (groups of subdermal nodules >5 mm in diameter). Eruptions may be accompanied by fever and malaise, lymphadenopathy, acute bone and joint pains, and headache. Fatality rates during this phase are low.","definition_xrefs":["Orphanet:659759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Oroya fever","termid":"MONDO:0018984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"verruga peruana","secondary_identifiers":["UMLS:C0042552","MEDGEN:21848"],"termid":"MONDO:0971058","xrefs":{"Monarch":{"xref_id":"0971058"}}}


id: MONDO:0017497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital absence of thigh and lower leg with foot present","termid":"MONDO:0017442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of thigh and lower leg with foot present, bilateral","secondary_identifiers":["UMLS:C2910297","ICD10CM:Q72.13","MEDGEN:1843495","Orphanet:295091"],"synonyms":[{"name":"Femorotibiofibular intercalary transverse meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017497","xrefs":{"Monarch":{"xref_id":"0017497"}}}


id: PBO:0069672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 949, pseudogene","termid":"PBO:0069672"}


id: PBO:0047548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 7","termid":"PBO:0047548"}


id: PBO:0086419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase activating protein (GAP) with a role in exocytosis; stimulates Gyp5p GAP activity on Ypt1p, colocalizes with Gyp5p at sites of polarized growth; interacts with Gyp5p, Rvs161p, and Rvs167p; involved in recruiting Rvs167p to the bud tip during polarized growth; increases in abundance and relocalizes from bud neck to cytoplasm upon DNA replication stress; GYL1 has a paralog, GYP5, that arose from the whole genome duplication","termid":"PBO:0086419"}


id: GO:0007625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism relating to grooming, cleaning and brushing to remove dirt and parasites.","definition_xrefs":["GOC:pr","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"grooming behavior","synonyms":[{"name":"grooming behaviour","type":"exact"}],"termid":"GO:0007625"}


id: GO:0097248
data:
  {"annotated_genes":["SJAG_00030","SJAG_01017","SJAG_00661","SJAG_01738"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94352,100514,105003,111237],"is_not":false,"summary":null,"term":"GO:0097248"}]},"cv_name":"biological_process","definition":"A process in which a protein or protein complex is maintained in a specific location in the cell cortex of a cell tip, and is prevented from moving elsewhere. The cell cortex of a cell tip is the region directly beneath the plasma membrane at either end of the longest axis of a cylindrical or elongated cell.","definition_xrefs":["PMID:19646873","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in cell cortex","termid":"GO:0032065"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00661":null,"SJAG_01017":null,"SJAG_01738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maintenance of protein location in cell cortex of cell tip","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097248","terms_by_termid":{"GO:0097248":null}}


id: SO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes a C_D_box_snoRNA. Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.","definition_xrefs":["PMID:12457565","PMID:22065625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_gene","termid":"SO:0001267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_snoRNA_gene","synonyms":[{"name":"box C/D snoRNA gene, C D box snoRNA gene, C/D box snoRNA gene","type":"exact"}],"termid":"SO:0002375"}


id: MONDO:0019127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare idiopathic inflammatory myopathy characterized by symmetric proximal muscle weakness and elevated muscle enzymes.","definition_xrefs":["Orphanet:732"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"acquired idiopathic inflammatory myopathy","termid":"MONDO:0020122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"polymyositis","secondary_identifiers":["DOID:0080745","MedDRA:10036102","ICD9:710.4","MEDGEN:39086","NCIT:C26925","GARD:7425","MESH:D017285","SCTID:31384009","NANDO:1200276","EFO:0003063","UMLS:C0085655","ICD10CM:M33.2","Wikipedia:Polymyositis","icd11.foundation:1157134196"],"synonyms":[{"name":"PM","type":"exact"},{"name":"polymyositis","type":"exact"}],"termid":"MONDO:0019127","xrefs":{"Monarch":{"xref_id":"0019127"}}}


id: PBO:0111381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Llp1","termid":"PBO:0111381"}


id: MONDO:0003807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete follicular thyroid adenoma (obsolete MONDO:0003807)","termid":"MONDO:0003807","xrefs":{"Monarch":{"xref_id":"0003807"}}}


id: GO:0051950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate) into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051943"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","termid":"GO:0051947"},{"relation_name":"positively_regulates","term_name":"gamma-aminobutyric acid reuptake","termid":"GO:0051936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gamma-aminobutyric acid uptake involved in transmission of nerve impulse","synonyms":[{"name":"activation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"positive regulation of 4-aminobutyrate reuptake","type":"exact"},{"name":"positive regulation of 4-aminobutyrate uptake during transmission of nerve impulse","type":"exact"},{"name":"positive regulation of GABA reuptake","type":"exact"},{"name":"positive regulation of GABA uptake during transmission of nerve impulse","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid reuptake","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"related"},{"name":"positive regulation of gamma-aminobutyric acid uptake involved in conduction of nerve impulse","type":"exact"},{"name":"stimulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"narrow"},{"name":"up regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"up-regulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"},{"name":"upregulation of gamma-aminobutyric acid uptake during transmission of nerve impulse","type":"exact"}],"termid":"GO:0051950"}


id: GO:0010235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stereotyped symmetric cell division by which guard mother cell give rise to stomatal guard cells.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinesis by cell plate formation","termid":"GO:0000911"},{"relation_name":"part_of","term_name":"stomatal lineage progression","termid":"GO:0010440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"guard mother cell cytokinesis","synonyms":[{"name":"guard mother cell division","type":"exact"}],"termid":"GO:0010235"}


id: GO:0008754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a lipid-linked O antigen + a lipid A-core oligosaccharide = a lipopolysaccharide + a polyisoprenyl diphosphate.","definition_xrefs":["EC:2.4.99.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"O-antigen ligase activity","secondary_identifiers":["MetaCyc:RXN-13611"],"termid":"GO:0008754"}


id: PBO:0065512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline-serine-threonine phosphatase interacting protein 2","termid":"PBO:0065512"}


id: PBO:0039786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 12B","termid":"PBO:0039786"}


id: GO:2000219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of invasive growth in response to glucose limitation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070786"},{"relation_name":"is_a","term_name":"regulation of invasive growth in response to glucose limitation","termid":"GO:2000217"},{"relation_name":"positively_regulates","term_name":"invasive growth in response to glucose limitation","termid":"GO:0001403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of invasive growth in response to glucose limitation","synonyms":[{"name":"positive regulation of colony morphology","type":"related"}],"termid":"GO:2000219"}


id: PBO:0040367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk-membrane subunit b pseudogene 4","termid":"PBO:0040367"}


id: PBO:0065076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prickle planar cell polarity protein 3","termid":"PBO:0065076"}


id: PBO:0081692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 614","termid":"PBO:0081692"}


id: MOD:02048
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-histidine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-histidine residue","synonyms":[{"name":"XlnkHis","type":"exact"}],"termid":"MOD:02048"}


id: GO:0061325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to the shaping of the outflow tract.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in outflow tract morphogenesis","termid":"GO:0061325"}


id: PBO:0047975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member B, pseudogene","termid":"PBO:0047975"}


id: GO:0102514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-feruloyl-beta-D-glucose = cyanidin 3,7-di-O-beta-D-glucoside betaine + ferulate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-glucoside 7-O-glucosyltransferase (feruloyl-glucose dependent) activity (obsolete GO:0102514)","termid":"GO:0102514"}


id: PBO:0040929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 like","termid":"PBO:0040929"}


id: PR:Q10435
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase TRIP12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01893","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin fusion degradation protein C12B10.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.01c","secondary_identifiers":["UniProtKB:Q10435"],"synonyms":[{"name":"Spom972h-TRIP12","type":"exact"}],"termid":"PR:Q10435"}


id: GO:2000141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of octopamine signaling pathway involved in response to food.","definition_xrefs":["GOC:mah","PMID:19609300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to food","termid":"GO:0032097"},{"relation_name":"is_a","term_name":"positive regulation of octopamine signaling pathway","termid":"GO:2000130"},{"relation_name":"is_a","term_name":"regulation of octopamine signaling pathway involved in response to food","termid":"GO:2000139"},{"relation_name":"positively_regulates","term_name":"octopamine signaling pathway involved in response to food","termid":"GO:0071935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of octopamine signaling pathway involved in response to food","synonyms":[{"name":"positive regulation of octopamine signalling pathway involved in response to food","type":"exact"}],"termid":"GO:2000141"}


id: FYPO:0002555
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[119758,119762,119750,119751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex of a cell is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortex during vegetative growth","termid":"FYPO:0000731"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex","termid":"FYPO:0001371"},{"relation_name":"is_a","term_name":"abolished protein localization to cell division site","termid":"FYPO:0001880"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":2,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abolished protein localization to medial cortex during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta"],"synonyms":[{"name":"abolished protein localisation to medial cortex during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortex during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to medial ring during vegetative growth","type":"exact"},{"name":"protein localization to medial cortex abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0002555","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0007177":null}}


id: MOD:00967
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-lysine residues to form syndesine, hydroxylysinohydroxynorleucine.","definition_xrefs":["DeltaMass:35","PubMed:75151974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndesine","synonyms":[{"name":"hydroxylysinohydroxynorleucine","type":"exact"}],"termid":"MOD:00967"}


id: PBO:0082764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the small-subunit (SSU) processome; SSU processome is involved in the biogenesis of the 18S rRNA","termid":"PBO:0082764"}


id: GO:1904122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An octopamine signaling pathway that results in positive regulation of fatty acid beta-oxidation.","definition_xrefs":["GOC:kmv","GO_REF:0000063","GOC:TermGenie","GOC:dph","PMID:24120942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fatty acid beta-oxidation","termid":"GO:0032000"},{"relation_name":"is_a","term_name":"octopamine signaling pathway","termid":"GO:0071927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0023052","GO:0044281"],"is_obsolete":false,"name":"positive regulation of fatty acid beta-oxidation by octopamine signaling pathway","synonyms":[{"name":"activation of fatty acid beta-oxidation by octopamine signaling pathway","type":"narrow"},{"name":"stimulation of fatty acid beta-oxidation by octopamine signaling pathway","type":"narrow"},{"name":"up regulation of fatty acid beta-oxidation by octopamine signaling pathway","type":"exact"},{"name":"up-regulation of fatty acid beta-oxidation by octopamine signaling pathway","type":"exact"},{"name":"upregulation of fatty acid beta-oxidation by octopamine signaling pathway","type":"exact"}],"termid":"GO:1904122"}


id: GO:0015408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Fe3+(out) = ADP + phosphate + Fe3+(in).","definition_xrefs":["RHEA:12332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferric iron transmembrane transporter activity","termid":"GO:0015091"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type ferric iron transporter activity","secondary_identifiers":["EC:7.2.2.7","MetaCyc:3.6.3.30-RXN"],"synonyms":[{"name":"ABC-type Fe3+ transporter","type":"exact"},{"name":"ATPase-coupled ferric iron transmembrane transporter activity","type":"related"},{"name":"Fe3+-transporting ATPase activity","type":"related"},{"name":"ferric ABC transporter","type":"exact"},{"name":"ferric transporting ATPase activity","type":"related"},{"name":"ferric-transporting ATPase activity","type":"related"}],"termid":"GO:0015408"}


id: GO:0050032
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-rhamnonate = 2-dehydro-3-deoxy-L-rhamnonate + H2O.","definition_xrefs":["EC:4.2.1.90","RHEA:23080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"L-rhamnonate dehydratase activity","secondary_identifiers":["MetaCyc:L-RHAMNONATE-DEHYDRATASE-RXN","KEGG_REACTION:R03774"],"synonyms":[{"name":"L-rhamnonate hydro-lyase (2-dehydro-3-deoxy-L-rhamnonate-forming)","type":"related"},{"name":"L-rhamnonate hydro-lyase activity","type":"related"}],"termid":"GO:0050032"}


id: GO:0061853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuroblast migration.","definition_xrefs":["PMID:23149556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"neuroblast migration","termid":"GO:0097402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuroblast migration","termid":"GO:0061853"}


id: MONDO:1010680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in cheetah.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, cheetah","secondary_identifiers":["OMIA:000038-32536"],"termid":"MONDO:1010680","xrefs":{"Monarch":{"xref_id":"1010680"}}}


id: GO:0052531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of fluxes of calcium ions that occur as part of the defense response of a host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont calcium ion flux (obsolete GO:0052531)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont Ca2+ flux","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont calcium ion flux","type":"exact"}],"termid":"GO:0052531"}


id: MONDO:0020512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"precursor T-cell acute lymphoblastic leukemia","secondary_identifiers":["GARD:19694","Orphanet:99861","icd11.foundation:803161771","EFO:1001830"],"synonyms":[{"name":"T-ALL","type":"broad"},{"name":"precursor T-cell acute lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor T-cell acute lymphocytic leukaemia","type":"exact"},{"name":"precursor T-cell acute lymphocytic leukemia","type":"exact"},{"name":"precursor T-cell acute lymphocytic leukemia/lymphoma","type":"exact"}],"termid":"MONDO:0020512","xrefs":{"Monarch":{"xref_id":"0020512"}}}


id: MONDO:0034668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete terminal transverse limb defect (obsolete MONDO:0034668)","secondary_identifiers":["Orphanet:498461"],"termid":"MONDO:0034668","xrefs":{"Monarch":{"xref_id":"0034668"}}}


id: GO:0043271
data:
  {"annotated_genes":["SJAG_00296","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91544,113746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"monoatomic ion transport","termid":"GO:0006811"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of monoatomic ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of ion transport","type":"exact"},{"name":"down-regulation of ion transport","type":"exact"},{"name":"downregulation of ion transport","type":"exact"},{"name":"inhibition of ion transport","type":"narrow"},{"name":"negative regulation of ion transport","type":"broad"}],"termid":"GO:0043271","terms_by_termid":{"GO:1905949":null}}


id: PBO:0010232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain containing protein required for Sre1 cleavage","termid":"PBO:0010232"}


id: GO:0061220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric macula densa over time, from its formation to the mature structure. The mesonephric macula densa is an area of specialized cells in the distal tubule of the mesonephros that makes contact with the vascular pole of the glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron epithelium development","termid":"GO:0061241"},{"relation_name":"is_a","term_name":"macula densa development","termid":"GO:0072024"},{"relation_name":"part_of","term_name":"mesonephric juxtaglomerular apparatus development","termid":"GO:0061212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric macula densa development","termid":"GO:0061220"}


id: MONDO:0015973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic coagulation disorder (obsolete MONDO:0015973)","termid":"MONDO:0015973","xrefs":{"Monarch":{"xref_id":"0015973"}}}


id: MONDO:0013466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 13","secondary_identifiers":["MEDGEN:462572","UMLS:C3151222","OMIM:613857","DOID:0080406"],"synonyms":[{"name":"OFC13","type":"exact"},{"name":"orofacial cleft 13","type":"exact"}],"termid":"MONDO:0013466","xrefs":{"Monarch":{"xref_id":"0013466"}}}


id: MOD:01182
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks a cysteine and a histidine residue by forming the adduct 6-(S-L-cysteinyl)-8alpha-(-3'-L-histidino)-FAD.","definition_xrefs":["RESID:AA0436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"flavin crosslinked residues","termid":"MOD:01621"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"6-(S-L-cysteinyl)-8alpha-(-3'-L-histidino)-FAD","synonyms":[{"name":"6-((R)-2-amino-2-carboxyethyl)sulfanyl-8alpha-[4-((S)-2-amino-2-carboxyethyl)imidazol-3-yl]-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine","type":"exact"},{"name":"6-(S-L-cysteinyl)-8alpha-(N3'-L-histidino)-FAD","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N(delta1)-histidyl)-FAD","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N(pi)-histidyl)-FAD","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(N3'-histidyl)-FAD","type":"exact"},{"name":"6-(S-cysteinyl)-8alpha-(pros-histidyl)-FAD","type":"exact"},{"name":"BINDING FAD (covalent; via 2 links)","type":"exact"},{"name":"BINDING FAD (covalent; via 2 links, pros nitrogen)","type":"exact"},{"name":"CROSSLNK 6-(S-cysteinyl)-8alpha-(pros-histidyl)-FAD (His-Cys)","type":"exact"},{"name":"SCys6-NprosHis8a-FAD","type":"exact"}],"termid":"MOD:01182"}


id: MONDO:0800307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"de la Chapelle dysplasia","secondary_identifiers":["MEDGEN:342529","UMLS:C1850555","icd11.foundation:248590292"],"synonyms":[{"name":"DLCD","type":"exact"}],"termid":"MONDO:0800307","xrefs":{"Monarch":{"xref_id":"0800307"}}}


id: PBO:0046218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 11","termid":"PBO:0046218"}


id: GO:0050190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 1-phosphate + ATP = alpha-D-glucose 1,6-bisphosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.10","RHEA:13377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"phosphoglucokinase activity","secondary_identifiers":["KEGG_REACTION:R00949","MetaCyc:PHOSPHOGLUCOKINASE-RXN"],"synonyms":[{"name":"ATP:D-glucose-1-phosphate 6-phosphotransferase activity","type":"related"},{"name":"ATP:alpha-D-glucose-1-phosphate 6-phosphotransferase activity","type":"related"},{"name":"glucose-phosphate kinase activity","type":"related"},{"name":"phosphoglucokinase (phosphorylating)","type":"related"}],"termid":"GO:0050190"}


id: PBO:0034635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_forward_centromeric_outer_repeat_transcript_level","termid":"PBO:0034635"}


id: MONDO:0005822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A stage of syphilis characterized by the serologic evidence of infection by Treponema pallidum without evidence of accompanying signs or symptoms related to the disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syphilis","termid":"MONDO:0005976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent syphilis","secondary_identifiers":["ICD9:097.1","DOID:9531","EFO:0007340","NCIT:C35056","MEDGEN:21056","MESH:D013592","SCTID:444150000","UMLS:C0039133"],"termid":"MONDO:0005822","xrefs":{"Monarch":{"xref_id":"0005822"}}}


id: GO:0018123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer, from NAD, of ADP-ribose to peptidyl-cysteine to form peptidyl-S-(ADP-ribosyl)-L-cysteine.","definition_xrefs":["RESID:AA0169"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine ADP-ribosylation (obsolete GO:0018123)","termid":"GO:0018123"}


id: MONDO:1011345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Poisoning that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poisoning, non-human animal","termid":"MONDO:1011345","xrefs":{"Monarch":{"xref_id":"1011345"}}}


id: PBO:0049152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 1A","termid":"PBO:0049152"}


id: FYPO:0001860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at a higher frequency than normal during the meiotic cell cycle. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased minichromosome loss","termid":"FYPO:0001859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased minichromosome loss during meiotic cell cycle","synonyms":[{"name":"increased minichromosome loss during meiosis","type":"related"},{"name":"meiotic minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0001860"}


id: GO:0032064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation initiation, as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational initiation in response to stress","termid":"GO:0032058"},{"relation_name":"is_a","term_name":"positive regulation of translation in response to osmotic stress","termid":"GO:0032062"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to osmotic stress","termid":"GO:0043561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of translational initiation in response to osmotic stress","synonyms":[{"name":"activation of translation initiation in response to osmotic stress","type":"narrow"},{"name":"stimulation of translation initiation in response to osmotic stress","type":"narrow"},{"name":"up regulation of translation initiation in response to osmotic stress","type":"exact"},{"name":"up-regulation of translation initiation in response to osmotic stress","type":"exact"},{"name":"upregulation of translation initiation in response to osmotic stress","type":"exact"}],"termid":"GO:0032064"}


id: PBO:0087445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit II of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain; one of three mitochondrially-encoded subunits","termid":"PBO:0087445"}


id: SO:0002022
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small RNA molecule, 22-23 nt in size, that is the product of a longer RNA. The production of priRNAs is independent of dicer and involves binding of RNA by argonaute and trimming by triman. In fission yeast, priRNAs trigger the establishment of heterochromatin. PriRNAs are primarily generated from centromeric transcripts (dg and dh repeats), but may also be produced from degradation products of primary transcripts.","definition_xrefs":["PomBase:al","PMID:20178743","PMID:24095277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"priRNA","synonyms":[{"name":"primal small RNA","type":"exact"}],"termid":"SO:0002022"}


id: MONDO:0019812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tricuspid valve prolapse (obsolete MONDO:0019812)","termid":"MONDO:0019812","xrefs":{"Monarch":{"xref_id":"0019812"}}}


id: PBO:0046742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 1 like","termid":"PBO:0046742"}


id: GO:0036107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate, a precursor of 4-amino-4-deoxy-L-arabinose (L-Ara4N).","definition_xrefs":["PMID:15695810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate metabolic process","synonyms":[{"name":"4-amino-4-deoxy-alpha-L-arabinose undecaprenyl phosphate metabolic process","type":"exact"},{"name":"undecaprenyl phosphate alpha-L-Ara4N metabolism","type":"exact"}],"termid":"GO:0036107"}


id: GO:1905681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of innate immunity memory response.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"is_a","term_name":"regulation of innate immunity memory response","termid":"GO:1905680"},{"relation_name":"negatively_regulates","term_name":"innate immunity memory response","termid":"GO:0090714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of innate immunity memory response","synonyms":[{"name":"down regulation of innate immunity memory response","type":"exact"},{"name":"down-regulation of innate immunity memory response","type":"exact"},{"name":"downregulation of innate immunity memory response","type":"exact"},{"name":"inhibition of innate immunity memory response","type":"narrow"}],"termid":"GO:1905681"}


id: PBO:0004188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC complex B box binding subunit Sfc3","termid":"PBO:0004188"}


id: GO:0106129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of store-operated calcium entry.","definition_xrefs":["GOC:BHF","PMID:23447642","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport","termid":"GO:0051928"},{"relation_name":"is_a","term_name":"regulation of store-operated calcium entry","termid":"GO:2001256"},{"relation_name":"positively_regulates","term_name":"store-operated calcium entry","termid":"GO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of store-operated calcium entry","termid":"GO:0106129"}


id: PBO:0079028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 1-1","termid":"PBO:0079028"}


id: GO:1900943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of (Z)-nonadeca-1,14-diene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"positive regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900940"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900941"},{"relation_name":"positively_regulates","term_name":"(Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of (Z)-nonadeca-1,14-diene biosynthetic process","synonyms":[{"name":"activation of (Z)-nonadeca-1,14-diene anabolism","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene biosynthesis","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene formation","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene synthesis","type":"narrow"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"}],"termid":"GO:1900943"}


id: PBO:0045504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSP antisense RNA 1","termid":"PBO:0045504"}


id: PBO:0005528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Svf1 family protein Svf1","termid":"PBO:0005528"}


id: GO:0052701
data:
  {"annotated_genes":["SJAG_03856","SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111914,103968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[103969,111915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving compounds derived from histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modified histidine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular histidine derivative metabolic process","type":"exact"},{"name":"cellular histidine derivative metabolism","type":"exact"},{"name":"cellular modified histidine metabolic process","type":"exact"},{"name":"cellular modified histidine metabolism","type":"exact"},{"name":"histidine derivative metabolic process","type":"exact"},{"name":"modified histidine metabolism","type":"exact"}],"termid":"GO:0052701","terms_by_termid":{"GO:0052699":null,"GO:1903257":null}}


id: MONDO:1012674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any centronuclear myopathy that occurs in dogs due to a mutation in the HACD1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, dog","termid":"MONDO:1010918"},{"relation_name":"is_a","term_name":"centronuclear myopathy, non-human animal","termid":"MONDO:1012963"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centronuclear myopathy, HACD1-related, dog","secondary_identifiers":["OMIA:001374-9615"],"synonyms":[{"name":"HMLR","type":"exact"},{"name":"autosomal recessive muscular dystrophy","type":"related"},{"name":"hereditary myopathy of Labrador retrievers","type":"narrow"}],"termid":"MONDO:1012674","xrefs":{"Monarch":{"xref_id":"1012674"}}}


id: GO:0140994
data:
  {"annotated_genes":["SJAG_02203","SJAG_02592","SJAG_03061","SJAG_01654","SJAG_01286","SJAG_00150","SJAG_02389","SJAG_00342","SJAG_03967","SJAG_03624","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94712,98168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008353"},{"annotations":[67669,80186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008420"},{"annotations":[109409,94671,96141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140834"},{"annotations":[94672,106415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140836"},{"annotations":[96170,97521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180007"},{"annotations":[112347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180005"}]},"cv_name":"molecular_function","definition":"A catalytic activity that acts on the RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS). Reversible modifications cof the RNA polymerase II CTD repeats contribute to regulation of RNA polymerase activity.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null,"SJAG_01286":null,"SJAG_01654":null,"SJAG_02203":null,"SJAG_02389":null,"SJAG_02592":null,"SJAG_03061":null,"SJAG_03126":null,"SJAG_03624":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat modifying activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase II CTD repeat modifying activity","type":"exact"},{"name":"RNA polymerase II large subunit CTD heptapeptide repeat modifying activity","type":"exact"}],"termid":"GO:0140994","terms_by_termid":{"GO:0008353":null,"GO:0008420":null,"GO:0140834":null,"GO:0140836":null,"GO:0180005":null,"GO:0180007":null}}


id: PBO:0061707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 2","termid":"PBO:0061707"}


id: MONDO:0037747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A injury that involves the vertebral column.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"injury","termid":"MONDO:0021178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal injury","secondary_identifiers":["MESH:D013124","SCTID:262521009"],"synonyms":[{"name":"injury of vertebral column","type":"exact"},{"name":"vertebral column injury","type":"exact"}],"termid":"MONDO:0037747","xrefs":{"Monarch":{"xref_id":"0037747"}}}


id: SO:0000917
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a U.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000917 insert_U (obsolete SO:0000917)","synonyms":[{"name":"insert U","type":"exact"}],"termid":"SO:0000917"}


id: PBO:0089777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate decarboxylase family protein","termid":"PBO:0089777"}


id: GO:1904765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a maltose stimulus.","definition_xrefs":["PMID:24224056","GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to maltose (obsolete GO:1904765)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in cellular response to maltose stimulus","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in cellular response to maltose stimulus","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global involved in cellular response to maltose stimulus","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in cellular response to maltose stimulus","type":"exact"}],"termid":"GO:1904765"}


id: MONDO:0003232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute or chronic inflammation of the pancreas due to excessive alcohol drinking. Alcoholic pancreatitis usually presents as an acute episode but it is a chronic progressive disease in alcoholics.","definition_xrefs":["MESH:D019512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatitis","termid":"MONDO:0004982"},{"relation_name":"is_a","term_name":"alcohol-induced disorders","termid":"MONDO:0021699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"alcoholic pancreatitis","secondary_identifiers":["DOID:4988","MEDGEN:84027","UMLS:C0376670","EFO:1002013","SCTID:445507008"],"synonyms":[{"name":"alcoholic pancreatitis","type":"exact"}],"termid":"MONDO:0003232","xrefs":{"Monarch":{"xref_id":"0003232"}}}


id: PBO:0051032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family member 1 pseudogene 2","termid":"PBO:0051032"}


id: PBO:0110511
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKyrin repeats","termid":"PBO:0110511"}


id: GO:0005514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium ion storage activity (obsolete GO:0005514)","synonyms":[{"name":"calcium ion storage activity","type":"exact"}],"termid":"GO:0005514"}


id: PBO:0055175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2599","termid":"PBO:0055175"}


id: PBO:0086202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; required for the stability of Oli1p (Atp9p) mRNA; also required for the Oli1p ring formation; YMR098C is not an essential gene","termid":"PBO:0086202"}


id: PBO:0056972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 26b","termid":"PBO:0056972"}


id: GO:0016851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + Mg2+ + protoporphyrin IX = ADP + 3 H+ + Mg-protoporphyrin IX + phosphate.","definition_xrefs":["RHEA:13961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming nitrogen-metal bonds, forming coordination complexes","termid":"GO:0051003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"magnesium chelatase activity","secondary_identifiers":["KEGG_REACTION:R03877","MetaCyc:RXN1F-20","EC:6.6.1.1"],"synonyms":[{"name":"Mg-chelatase activity","type":"broad"},{"name":"Mg-protoporphyrin IX chelatase activity","type":"related"},{"name":"Mg-protoporphyrin IX magnesio-lyase activity","type":"related"},{"name":"Mg-protoporphyrin IX magnesium-lyase activity","type":"related"},{"name":"magnesium-chelatase activity","type":"related"},{"name":"magnesium-protoporphyrin IX chelatase activity","type":"related"},{"name":"magnesium-protoporphyrin chelatase activity","type":"related"},{"name":"protoporphyrin IX Mg-chelatase activity","type":"related"},{"name":"protoporphyrin IX magnesium-chelatase activity","type":"related"}],"termid":"GO:0016851"}


id: PBO:0016574
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Coiled coil Protein","termid":"PBO:0016574"}


id: PBO:0039444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKHD1 divergent transcript","termid":"PBO:0039444"}


id: PBO:0070243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 183 pseudogene","termid":"PBO:0070243"}


id: PBO:0058352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4725","termid":"PBO:0058352"}


id: MONDO:0007963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial atypical multiple mole melanoma syndrome","termid":"MONDO:0018453"},{"relation_name":"excluded_subClassOf","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"},{"relation_name":"is_a","term_name":"susceptibility to familial cutaneous melanoma","termid":"MONDO:0024462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, cutaneous malignant, susceptibility to, 1","secondary_identifiers":["MEDGEN:320506","UMLS:C1835047","OMIM:155600","SCTID:254819008"],"synonyms":[{"name":"B-K Mole syndrome","type":"related"},{"name":"CMM1","type":"related"},{"name":"dysplastic Nevus syndrome, hereditary","type":"related"},{"name":"familial atypical Mole-malignant melanoma syndrome","type":"related"},{"name":"melanoma, cutaneous malignant","type":"related"},{"name":"melanoma, cutaneous malignant, 1","type":"exact"},{"name":"melanoma, cutaneous malignant, susceptibility to, 1","type":"exact"},{"name":"melanoma, familial","type":"related"},{"name":"melanoma, malignant","type":"related"},{"name":"melanoma, malignant, somatic","type":"exact"}],"termid":"MONDO:0007963","xrefs":{"Monarch":{"xref_id":"0007963"}}}


id: PR:P41838
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rae1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A)+ RNA export protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.05c","synonyms":[{"name":"Spom972h-rae1","type":"exact"}],"termid":"PR:P41838"}


id: GO:0044126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont regulates the increase in its size or mass within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of growth of symbiont in host (obsolete GO:0044126)","termid":"GO:0044126"}


id: MONDO:0005536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulcerative colitis that involves the entire colon.","direct_ancestors":[{"relation_name":"is_a","term_name":"ulcerative colitis","termid":"MONDO:0005101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"pancolitis","secondary_identifiers":["NANDO:1200450","EFO:0005626","MEDGEN:1720692","UMLS:C0868908"],"synonyms":[{"name":"pan-ulcerative colitis","type":"exact"},{"name":"universal colitis","type":"exact"}],"termid":"MONDO:0005536","xrefs":{"Monarch":{"xref_id":"0005536"}}}


id: GO:0052650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinol + NADP+ = all-trans-retinal + NADPH + H+.","definition_xrefs":["RHEA:25033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NADP+) activity","termid":"GO:0008106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"all-trans-retinol dehydrogenase (NADP+) activity","secondary_identifiers":["Reactome:R-HSA-5623643","Reactome:R-HSA-2464822","Reactome:R-HSA-5615668","Reactome:R-HSA-5419165","Reactome:R-HSA-74872","Reactome:R-HSA-2464803","KEGG_REACTION:R08379","Reactome:R-HSA-2465921","Reactome:R-HSA-2465940","MetaCyc:RXN-10841","Reactome:R-HSA-2466861","EC:1.1.1.300"],"synonyms":[{"name":"NADP(H)-dependent retinol dehydrogenase/reductase activity","type":"related"},{"name":"NADP-retinol dehydrogenase activity","type":"exact"},{"name":"all-trans retinal reductase activity","type":"broad"},{"name":"all-trans-retinol dehydrogenase activity","type":"broad"},{"name":"retinol dehydrogenase [NADP+] activity","type":"related"},{"name":"retinol dehydrogenase activity","type":"broad"},{"name":"retinol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0052650"}


id: PBO:0084982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase; transfers electrons from NADH to ubiquinone in respiratory chain but does not pump protons, in contrast to higher eukaryotic multisubunit respiratory complex I; upon apoptotic stress, is activated in mitochondria by N-terminal cleavage, then translocates to cytoplasm to induce apoptosis; homolog of human AIFM2; yeast NDI1 complements several phenotypes of human cell line with mutated MT-ND4, implicated in Leber hereditary optic neuropathy","termid":"PBO:0084982"}


id: PBO:0059503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded ATP synthase membrane subunit 8","termid":"PBO:0059503"}


id: PBO:0077074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIA1 cytotoxic granule associated RNA binding protein like 1","termid":"PBO:0077074"}


id: PBO:0029935
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_spheroid_cell","termid":"PBO:0029935"}


id: GO:0050292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + O2 + pregna-4,9(11)-diene-3,20-dione = 9,11alpha-epoxypregn-4-ene-3,20-dione + A + H2O.","definition_xrefs":["RHEA:19557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"steroid 9-alpha-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R04392","EC:1.14.99.24","MetaCyc:STEROID-9-ALPHA-MONOOXYGENASE-RXN"],"synonyms":[{"name":"steroid 9-alpha-hydroxylase activity","type":"related"},{"name":"steroid 9a-monooxygenase activity","type":"exact"},{"name":"steroid 9alpha-hydroxylase activity","type":"related"},{"name":"steroid 9alpha-monooxygenase activity","type":"related"},{"name":"steroid,hydrogen-donor:oxygen oxidoreductase (9-epoxidizing)","type":"related"}],"termid":"GO:0050292"}


id: FYPO:0007795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in G1 phase after the cells have undergone two rounds of cell division under nutrient-replete conditions. This arrest resembles that of wild-type cells under conditions of nitrogen starvation.","definition_xrefs":["PMID:28476936","PomBase:mah","PMID:17121544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic G1 phase","termid":"FYPO:0005097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"two cell divisions prior to cell cycle arrest in mitotic G1 phase without nutrient starvation","synonyms":[{"name":"two cell divisions prior to mitotic G1 arrest without nutrient starvation","type":"exact"},{"name":"two cell divisions prior to mitotic cell cycle arrest in G1 phase without nutrient starvation","type":"exact"}],"termid":"FYPO:0007795"}


id: RO:0002427
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of causally upstream of or within","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_processes","termid":"RO:0002501"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_downstream_of_or_within","termid":"RO:0002427"}


id: GO:0061405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hydrostatic pressure stimulus. Hydrostatic pressure is the force acting on an object in a system where the fluid is at rest (as opposed to moving). The weight of the fluid above the object creates pressure on it.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to hydrostatic pressure (obsolete GO:0061405)","termid":"GO:0061405"}


id: MONDO:1011322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Iatrogenic disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iatrogenic disease, non-human animal","termid":"MONDO:1011322","xrefs":{"Monarch":{"xref_id":"1011322"}}}


id: MONDO:0043083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"synostosis","termid":"MONDO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"coronal synostosis, syndactyly and jejunal atresia","secondary_identifiers":["GARD:1532","MEDGEN:419740","MESH:C536445","UMLS:C2931194"],"synonyms":[{"name":"asymmetrical coronal synostosis, cutaneous syndactyly of the fingers and toes, and jejunal atresia","type":"related"}],"termid":"MONDO:0043083","xrefs":{"Monarch":{"xref_id":"0043083"}}}


id: PBO:0034323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-phenotype_of","termid":"PBO:0034323"}


id: PBO:0029910
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_sterol_level","termid":"PBO:0029910"}


id: MONDO:0011330
data:
  {"annotated_genes":["SJAG_03692"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86016],"is_not":false,"summary":null,"term":"MONDO:0011330"}]},"cv_name":"mondo","definition":"Spinocerebellar ataxia type 10 (SCA10) is a subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by slowly progressive cerebellar syndrome and epilepsy, sometimes mild pyramidal signs, peripheral neuropathy and neuropsychological disturbances.","definition_xrefs":["Orphanet:98761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type IV","termid":"MONDO:0019794"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03692":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia type 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:369786","MESH:C566874","GARD:10474","OMIM:603516","icd11.foundation:157300879","DOID:0050960","SCTID:715754007","UMLS:C1963674"],"synonyms":[{"name":"SCA10","type":"exact"},{"name":"spinocerebellar ataxia 10","type":"related"},{"name":"spinocerebellar ataxia type 10","type":"exact"}],"termid":"MONDO:0011330","terms_by_termid":{"MONDO:0011330":null},"xrefs":{"Monarch":{"xref_id":"0011330"}}}


id: MONDO:0004896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of strabismus in which one or both eyes are deviated medially.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"strabismus","termid":"MONDO:0003432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esotropia","secondary_identifiers":["ICD9:378.0","DOID:9840","MESH:D004948","NCIT:C34596","ICD9:378.00","MEDGEN:4550","icd11.foundation:459766644","UMLS:C0014877","SCTID:16596007"],"synonyms":[{"name":"convergence in manifest squint","type":"exact"},{"name":"crossed eyes","type":"exact"},{"name":"internal strabismus","type":"exact"}],"termid":"MONDO:0004896","xrefs":{"Monarch":{"xref_id":"0004896"}}}


id: GO:0000951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of branched chain amino acids to produce branched chain alcohols with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When methionine is used as the substrate, 3-methylthiopropanol is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of alcohols, often collectively referred to as fusel alcohols. Depending on the redox state of the cells, carboxylic acid derivatives may be produced instead of alcohols.","definition_xrefs":["PMID:18281432","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to alcohol via Ehrlich pathway","termid":"GO:0000947"},{"relation_name":"is_a","term_name":"methionine catabolic process","termid":"GO:0009087"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"methionine catabolic process to 3-methylthiopropanol","termid":"GO:0000951"}


id: PBO:0066748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 46","termid":"PBO:0066748"}


id: PBO:0079005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 5-1","termid":"PBO:0079005"}


id: PBO:0046842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 15","termid":"PBO:0046842"}


id: PBO:0002827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PQ loop protein","termid":"PBO:0002827"}


id: PBO:0070115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 29 pseudogene","termid":"PBO:0070115"}


id: PR:O74879
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar protein 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14927:SF0","PRO:DNx","OMA:SCHPO04196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein enp2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.09","secondary_identifiers":["UniProtKB:O74879"],"synonyms":[{"name":"Spom972h-NOL10","type":"exact"}],"termid":"PR:O74879"}


id: MONDO:0002283
data:
  {"annotated_genes":["SJAG_04757","SJAG_03866","SJAG_05277","SJAG_00115"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87267,87266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011706"},{"annotations":[87252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010476"},{"annotations":[85969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014290"}]},"cv_name":"mondo","definition":"A nonspecific term referring both to the pathologic finding of swelling of distal portions of axons in the brain and to disorders which feature this finding. Neuroaxonal dystrophy is seen in various genetic diseases, vitamin deficiencies, and aging. Infantile neuroaxonal dystrophy is an autosomal recessive disease characterized by arrested psychomotor development at 6 months to 2 years of age, ataxia, brain stem dysfunction, and quadriparesis. Juvenile and adult forms also occur. Pathologic findings include brain atrophy and widespread accumulation of axonal spheroids throughout the neuroaxis, peripheral nerves, and dental pulp. (From Davis & Robertson, Textbook of Neuropathology, 2nd ed, p927)","definition_xrefs":["MESH:D019150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_03866":null,"SJAG_04757":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neuroaxonal dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2367","MEDGEN:90924","NCIT:C161542","UMLS:C0338473","SCTID:230365004"],"termid":"MONDO:0002283","terms_by_termid":{"MONDO:0010476":null,"MONDO:0011706":null,"MONDO:0014290":null},"xrefs":{"Monarch":{"xref_id":"0002283"}}}


id: GO:0052323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phytoalexin biosynthesis, the chemical reactions and pathways resulting in the formation of phytoalexins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phytoalexin biosynthetic process (obsolete GO:0052323)","synonyms":[{"name":"down regulation of phytoalexin biosynthesis","type":"exact"},{"name":"down-regulation of phytoalexin biosynthesis","type":"exact"},{"name":"downregulation of phytoalexin biosynthesis","type":"exact"},{"name":"inhibition of phytoalexin biosynthesis","type":"narrow"},{"name":"negative regulation of phytoalexin biosynthesis","type":"exact"}],"termid":"GO:0052323"}


id: PATO:0000623
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's protruding or projecting from the body.","definition_xrefs":["sdvc:sdvc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exserted","synonyms":[{"name":"prolapse","type":"related"},{"name":"prolapsed","type":"related"}],"termid":"PATO:0000623"}


id: PBO:0055655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3095","termid":"PBO:0055655"}


id: GO:0051881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of the mitochondrial membrane potential, the electric potential existing across the mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"}


id: PR:Q8NIP8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8NIP8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.21","synonyms":[{"name":"Spom972h-wtf12","type":"exact"}],"termid":"PR:Q8NIP8"}


id: GO:0046679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a streptomycin stimulus. Streptomycin is a commonly used antibiotic in cell culture media which acts only on prokaryotes and blocks transition from initiation complex to chain elongating ribosome.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"},{"relation_name":"is_a","term_name":"response to glycoside","termid":"GO:1903416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to streptomycin","synonyms":[{"name":"streptomycin susceptibility/resistance","type":"related"}],"termid":"GO:0046679"}


id: MONDO:0010945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the CA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 17","secondary_identifiers":["DOID:0110404","GARD:10387","OMIM:600852","MEDGEN:322153","UMLS:C1833245","MESH:C563437","ICD10CM:H35.5"],"synonyms":[{"name":"CA4 retinitis pigmentosa","type":"exact"},{"name":"RP 17","type":"related"},{"name":"RP17","type":"exact"},{"name":"retinitis pigmentosa 17","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in CA4","type":"exact"},{"name":"retinitis pigmentosa type 17","type":"exact"}],"termid":"MONDO:0010945","xrefs":{"Monarch":{"xref_id":"0010945"}}}


id: PBO:0051362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-15","termid":"PBO:0051362"}


id: PBO:0063931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired immunoglobin like type 2 receptor beta","termid":"PBO:0063931"}


id: GO:0004417
data:
  {"annotated_genes":["SJAG_00381"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66036],"is_not":false,"summary":null,"term":"GO:0004417"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-(2-hydroxyethyl)-4-methylthiazole + ATP = 4-methyl-5-(2-phosphoethyl)-thiazole + ADP + 2 H+.","definition_xrefs":["RHEA:24212","EC:2.7.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00381":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"hydroxyethylthiazole kinase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R04448","MetaCyc:THIAZOLSYN3-RXN"],"synonyms":[{"name":"4-methyl-5-(beta-hydroxyethyl)thiazole kinase activity","type":"related"},{"name":"ATP:4-methyl-5-(2-hydroxyethyl)thiazole 2-phosphotransferase activity","type":"related"},{"name":"hydroxyethylthiazole kinase (phosphorylating)","type":"related"}],"termid":"GO:0004417","terms_by_termid":{"GO:0004417":null}}


id: SO:0000180
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposable element that is incorporated into a chromosome by a mechanism that requires reverse transcriptase.","direct_ancestors":[{"relation_name":"is_a","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon","secondary_identifiers":["http://en.wikipedia.org/wiki/Retrotransposon"],"synonyms":[{"name":"class I","type":"related"},{"name":"class I transposon","type":"exact"},{"name":"retrotransposon element","type":"exact"}],"termid":"SO:0000180"}


id: MONDO:0017456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic polydactyly","termid":"MONDO:0011348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central polydactyly of fingers","secondary_identifiers":["UMLS:C0431903","icd11.foundation:243366415","Orphanet:295004","SCTID:205130008","MEDGEN:609220","GARD:21200"],"synonyms":[{"name":"central polydactyly","type":"related"},{"name":"central polydactyly of hand","type":"exact"},{"name":"mesoaxial polydactyly","type":"exact"},{"name":"mesoaxial polydactyly of fingers","type":"exact"},{"name":"mirror hand","type":"exact"}],"termid":"MONDO:0017456","xrefs":{"Monarch":{"xref_id":"0017456"}}}


id: GO:0042983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of amyloid-beta, a glycoprotein associated with Alzheimer's disease.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"amyloid precursor protein metabolic process","termid":"GO:0042982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid precursor protein biosynthetic process","synonyms":[{"name":"APP biosynthesis","type":"exact"},{"name":"APP biosynthetic process","type":"exact"},{"name":"amyloid precursor protein anabolism","type":"exact"},{"name":"amyloid precursor protein biosynthesis","type":"exact"},{"name":"amyloid precursor protein formation","type":"exact"},{"name":"amyloid precursor protein synthesis","type":"exact"}],"termid":"GO:0042983"}


id: GO:0009467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monoheme class I cytochrome c (obsolete GO:0009467)","synonyms":[{"name":"monoheme class I cytochrome c","type":"exact"}],"termid":"GO:0009467"}


id: PBO:0089506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ mediated genome instability protein Rmi1","termid":"PBO:0089506"}


id: FYPO:0008304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus during one or both meiotic nuclear divisions is abolished.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during meiosis","termid":"FYPO:0002957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to nucleus during meiosis","termid":"FYPO:0008304"}


id: GO:0032552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a deoxyribonucleotide, any compound consisting of a deoxyribonucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the deoxyribose moiety.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"deoxyribonucleotide binding","termid":"GO:0032552"}


id: PBO:0049345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 3","termid":"PBO:0049345"}


id: PR:O13827
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19A8.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19A8.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.11c","synonyms":[{"name":"Spom972h-SPAC19A8.11c","type":"exact"}],"termid":"PR:O13827"}


id: GO:0018342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of a prenyl group to a protein; geranyl, farnesyl, or geranylgeranyl groups may be added.","definition_xrefs":["ISBN:0198506732","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"is_a","term_name":"prenylation","termid":"GO:0097354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein prenylation","secondary_identifiers":["GO:0018346"],"synonyms":[{"name":"C-terminal protein prenylation","type":"narrow"},{"name":"protein amino acid prenylation","type":"exact"}],"termid":"GO:0018342"}


id: PBO:0087107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein P1 beta; component of the ribosomal stalk, which is involved in interaction of translational elongation factors with ribosome; free (non-ribosomal) P1 stimulates the phosphorylation of the eIF2 alpha subunit (Sui2p) by Gcn2p; accumulation is regulated by phosphorylation and interaction with the P2 stalk component","termid":"PBO:0087107"}


id: GO:1901166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any neural crest cell migration that is involved in autonomic nervous system development.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell migration","termid":"GO:0001755"},{"relation_name":"part_of","term_name":"autonomic nervous system development","termid":"GO:0048483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell migration involved in autonomic nervous system development","termid":"GO:1901166"}


id: PBO:0085370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphotyrosine-specific protein phosphatase; dephosphorylates a broad range of substrates in vivo, including Fpr3p; localized to the cytoplasm and the mitochondria; proposed to be a negative regulator of filamentation","termid":"PBO:0085370"}


id: MONDO:0019565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary von Willebrand disease (VWD) is a hereditary bleeding disorder caused by a genetic anomaly leading to quantitative, structural or functional abnormalities of the Willebrand factor (von Willebrand factor; VWF). Two major groups of VWF deficiency have been defined: quantitative and partial (type 1) or total (type 3), and qualitative (type 2) with several subtypes (2A, 2B, 2M, 2N).","definition_xrefs":["Orphanet:903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"},{"relation_name":"is_a","term_name":"von Willebrand disease (hereditary or acquired)","termid":"MONDO:0024574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hereditary von Willebrand disease","secondary_identifiers":["MedDRA:10047715","icd11.foundation:2112021600","GARD:7867","MEDGEN:1814986","MESH:C531844","SCTID:234446004","UMLS:C5703318","DOID:12531","ICD9:286.4"],"synonyms":[{"name":"congenital von willebrand disease","type":"related"},{"name":"congenital von willebrand's disease","type":"exact"},{"name":"hereditary von Willebrand disease","type":"exact"},{"name":"hereditary von Willebrand disease (hereditary or acquired)","type":"exact"},{"name":"vascular haemophilia","type":"broad"},{"name":"vascular hemophilia","type":"broad"},{"name":"vascular pseudohemophilia","type":"exact"},{"name":"von Willebrand disease","type":"broad"},{"name":"von Willebrand disorder","type":"broad"},{"name":"von Willebrand's disease","type":"related"},{"name":"von Willebrand's-Jurgens' disease","type":"broad"},{"name":"von Willebrand-Jrgens disease","type":"exact"},{"name":"von Willebrand-Jurgens disease","type":"broad"}],"termid":"MONDO:0019565","xrefs":{"Monarch":{"xref_id":"0019565"}}}


id: PBO:0028921
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_glucose_starvation_and_oxidative_stress","termid":"PBO:0028921"}


id: PBO:0043774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceruloplasmin","termid":"PBO:0043774"}


id: PBO:0060068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 15","termid":"PBO:0060068"}


id: GO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA segregation by mitosis and the beginning of DNA synthesis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G1 phase","termid":"GO:0051318"},{"relation_name":"part_of","term_name":"mitotic interphase","termid":"GO:0051329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051329"}],"interesting_parent_ids":["GO:0008150","GO:0051329"],"is_obsolete":false,"name":"mitotic G1 phase","secondary_identifiers":["Reactome:R-HSA-69236"],"synonyms":[{"name":"G1 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000080"}


id: PBO:0027959
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_catalase_activity_during_cellular_response_to_nitrosative_stress","termid":"PBO:0027959"}


id: PBO:0028912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_abnormal_septum","termid":"PBO:0028912"}


id: PBO:0070455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 12","termid":"PBO:0070455"}


id: PBO:0033796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_fidelity_of_double-strand_break_repair_via_nonhomologous_end_joining","termid":"PBO:0033796"}


id: GO:0033858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N-acetyl-D-galactosamine = ADP + N-acetyl-alpha-D-galactosamine 1-phosphate.","definition_xrefs":["EC:2.7.1.157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acetylgalactosamine kinase activity","secondary_identifiers":["RHEA:12617","MetaCyc:2.7.1.157-RXN"],"synonyms":[{"name":"ATP:N-acetyl-D-galactosamine 1-phosphotransferase activity","type":"related"},{"name":"GALK2","type":"related"},{"name":"GK2","type":"related"},{"name":"GalNAc kinase activity","type":"related"},{"name":"N-acetylgalactosamine (GalNAc)-1-phosphate kinase activity","type":"related"}],"termid":"GO:0033858"}


id: PBO:0048594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GH3 domain containing","termid":"PBO:0048594"}


id: PBO:0077173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tolloid like 2","termid":"PBO:0077173"}


id: PBO:0068735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 6, pseudogene","termid":"PBO:0068735"}


id: GO:0008735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (E)-4-(trimethylammonio)but-2-enoyl-CoA + L-carnitine = (E)-4-(trimethylammonio)but-2-enoate + L-carnitinyl-CoA and 4-trimethylammoniobutanoyl-CoA + L-carnitine = 4-trimethylammoniobutanoate + L-carnitinyl-CoA.","definition_xrefs":["PMID:7815937","PMID:8188598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-carnitine CoA-transferase activity","synonyms":[{"name":"L-carnitine dehydratase activity","type":"exact"},{"name":"L-carnitine hydro-lyase [4-(trimethylammonio)but-2-enoate-forming]","type":"related"},{"name":"L-carnitine hydro-lyase activity","type":"related"}],"termid":"GO:0008735"}


id: GO:1900059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sulfate assimilation.","definition_xrefs":["PMID:7601277","PMID:7891681","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of sulfate assimilation","termid":"GO:1900058"},{"relation_name":"positively_regulates","term_name":"sulfate assimilation","termid":"GO:0000103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sulfate assimilation","synonyms":[{"name":"activation of sulfate assimilation","type":"related"},{"name":"activation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"activation of sulphate assimilation","type":"exact"},{"name":"activation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"positive regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"positive regulation of sulphate assimilation","type":"exact"},{"name":"positive regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"up regulation of sulfate assimilation","type":"related"},{"name":"up regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"up regulation of sulphate assimilation","type":"exact"},{"name":"up regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"up-regulation of sulfate assimilation","type":"related"},{"name":"up-regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"up-regulation of sulphate assimilation","type":"exact"},{"name":"up-regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"upregulation of sulfate assimilation","type":"related"},{"name":"upregulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"upregulation of sulphate assimilation","type":"exact"},{"name":"upregulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"}],"termid":"GO:1900059"}


id: PBO:0058946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIX23 pseudogene 5","termid":"PBO:0058946"}


id: PBO:0056302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1S","termid":"PBO:0056302"}


id: PBO:0060785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B11","termid":"PBO:0060785"}


id: PBO:0003576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GIDA family tRNA uridine 5-carboxymethylaminomethyl modification enzyme (predicted)","termid":"PBO:0003576"}


id: PATO:0000065
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000065 relative percentage (obsolete PATO:0000065)","termid":"PATO:0000065"}


id: MONDO:0700006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characteristic in which the disease has a known cause.","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic vs non-idiopathic","termid":"MONDO:0700004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-idiopathic","termid":"MONDO:0700006","xrefs":{"Monarch":{"xref_id":"0700006"}}}


id: GO:0003854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-beta-hydroxy-Delta(5)-steroid + NAD+ = a 3-oxo-Delta(5)-steroid + NADH + H+. Also acts on on 3-beta-hydroxypregn-5-en-20-one to form progesterone.","definition_xrefs":["EC:1.1.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-beta-hydroxy-Delta5-steroid dehydrogenase (NAD+) activity","secondary_identifiers":["Reactome:R-HSA-193816","MetaCyc:1.1.1.145-RXN","Reactome:R-HSA-193789","Reactome:R-HSA-196372","Reactome:R-HSA-192097","Reactome:R-HSA-196350"],"synonyms":[{"name":"3-beta-hydroxy-5-ene steroid dehydrogenase activity","type":"related"},{"name":"3-beta-hydroxy-D5-steroid dehydrogenase activity","type":"exact"},{"name":"3beta-HSDH","type":"related"},{"name":"3beta-hydroxy steroid dehydrogenase/isomerase activity","type":"related"},{"name":"3beta-hydroxy-5-ene steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-5-ene-steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-5-ene-steroid oxidoreductase activity","type":"related"},{"name":"3beta-hydroxy-delta5-C27-steroid dehydrogenase/isomerase activity","type":"related"},{"name":"3beta-hydroxy-delta5-C27-steroid oxidoreductase","type":"broad"},{"name":"3beta-hydroxy-delta5-steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-delta5-steroid:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"5-ene-3-beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"delta5-3beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"progesterone reductase activity","type":"broad"},{"name":"steroid-delta5-3beta-ol dehydrogenase activity","type":"related"}],"termid":"GO:0003854"}


id: PBO:0090584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol kinase Sec59","termid":"PBO:0090584"}


id: MONDO:0600010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, moderate form of hypophosphatasia characterized by defective mineralization of bone and/or teeth, premature loss of teeth with intact roots, and reduced serum alkaline phosphatase (ALP) activity. Individuals can present with this form of hypophosphatasia in infancy, childhood, or adulthood. It can inherited via either autosomal dominant or autosomal recessive inheritance.","definition_xrefs":["PMID:32973344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypophosphatasia","termid":"MONDO:0018570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"moderate hypophosphatasia","termid":"MONDO:0600010","xrefs":{"Monarch":{"xref_id":"0600010"}}}


id: PBO:0113414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome-associated protein; involved along with heterodimeric partner Tma22p in recycling of 40S ribosomal subunits; involved in nonsense-mediated mRNA decay (NMD); contains a putative RNA binding domain; null mutant exhibits translation defects; localizes to the cytosol; has homology to human oncogene MCT-1; protein abundance increases in response to DNA replication stress","termid":"PBO:0113414"}


id: GO:2000867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of estrone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"estrone secretion","termid":"GO:0035943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of estrone secretion","synonyms":[{"name":"regulation of 3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"regulation of folliculin secretion","type":"exact"}],"termid":"GO:2000867"}


id: MONDO:0006576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe cellulitis of the submaxillary space with secondary involvement of the sublingual and submental space. It usually results from infection in the lower molar area or from a penetrating injury to the mouth floor. (From Dorland, 27th ed)","definition_xrefs":["MESH:D008158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulitis","termid":"MONDO:0005230"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Ludwig's angina","secondary_identifiers":["DOID:4558","ICD9:528.3","Wikipedia:Ludwig's_angina","MEDGEN:44205","UMLS:C0024081","SCTID:196542004"],"synonyms":[{"name":"Ludwig angina","type":"exact"},{"name":"cellulitis (disease) of mouth floor","type":"exact"},{"name":"cellulitis of floor of mouth","type":"exact"},{"name":"mouth floor cellulitis (disease)","type":"exact"}],"termid":"MONDO:0006576","xrefs":{"Monarch":{"xref_id":"0006576"}}}


id: GO:0090008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the hypoblast over time, from its formation to the mature structure. The hypoblast is a tissue formed from the inner cell mass that lies beneath the epiblast.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypoblast development","termid":"GO:0090008"}


id: PBO:0082952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic phosphorelay intermediate osmosensor and regulator; part of a two-component signal transducer that mediates osmosensing via a phosphorelay mechanism; required for mitophagy; dephosphorylated form is degraded by the ubiquitin-proteasome system; potential Cdc28p substrate","termid":"PBO:0082952"}


id: GO:1990608
data:
  {"annotated_genes":["SJAG_03200","SJAG_01422","SJAG_04558","SJAG_01460","SJAG_05196","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100942,103799,113227,111811,103162,90454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140480"}]},"cv_name":"biological_process","definition":"A process in which a mitotic spindle pole body is transported to, or maintained in, a specific cellular location.","definition_xrefs":["PMID:24963130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body localization","termid":"GO:0070631"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01460":null,"SJAG_02332":null,"SJAG_03200":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitotic spindle pole body localization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070632","GO:0071789"],"synonyms":[{"name":"establishment and maintenance of spindle pole body localization","type":"exact"},{"name":"establishment of spindle pole body localisation","type":"narrow"},{"name":"establishment of spindle pole body localization","type":"narrow"},{"name":"mitotic spindle pole body localization to nuclear envelope","type":"narrow"},{"name":"spindle pole body docking","type":"narrow"},{"name":"spindle pole body localisation in nuclear envelope","type":"narrow"},{"name":"spindle pole body localization in nuclear envelope","type":"narrow"},{"name":"spindle pole body localization to nuclear envelope","type":"narrow"},{"name":"spindle pole body positioning","type":"narrow"}],"termid":"GO:1990608","terms_by_termid":{"GO:0140480":null}}


id: PBO:0002093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S7 (predicted)","termid":"PBO:0002093"}


id: PBO:0072658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 10","termid":"PBO:0072658"}


id: GO:0052050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other organism by a type IV secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance secreted by type IV secretion system (obsolete GO:0052050)","termid":"GO:0052050"}


id: GO:0002119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nematode larva over time, from its formation to the mature structure. Nematode larval development begins with the newly hatched first-stage larva (L1) and ends with the end of the last larval stage (for example the fourth larval stage (L4) in C. elegans). Each stage of nematode larval development is characterized by proliferation of specific cell lineages and an increase in body size without alteration of the basic body plan. Nematode larval stages are separated by molts in which each stage-specific exoskeleton, or cuticle, is shed and replaced anew.","definition_xrefs":["GOC:ems","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval development","termid":"GO:0002164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode larval development","termid":"GO:0002119"}


id: GO:0070320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents, or reduces the activity of an inwardly rectifying potassium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel inhibitor activity","termid":"GO:0019870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"inward rectifier potassium channel inhibitor activity","termid":"GO:0070320"}


id: PBO:0076529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 42","termid":"PBO:0076529"}


id: GO:0019933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with production of cyclic AMP (cAMP), and ends with activation of downstream effectors that further transmit the signal within the cell.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cAMP-mediated signaling","synonyms":[{"name":"3',5' cAMP-mediated signaling","type":"exact"},{"name":"3',5' cAMP-mediated signalling","type":"exact"},{"name":"3',5'-cAMP-mediated signaling","type":"exact"},{"name":"3',5'-cAMP-mediated signalling","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate-mediated signaling","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate-mediated signalling","type":"exact"},{"name":"cAMP signaling","type":"exact"},{"name":"cAMP signalling","type":"exact"},{"name":"cAMP-mediated signal transduction","type":"exact"},{"name":"cAMP-mediated signalling","type":"exact"},{"name":"cyclic AMP-mediated signaling","type":"exact"},{"name":"cyclic AMP-mediated signalling","type":"exact"}],"termid":"GO:0019933"}


id: GO:0071023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spliceosomal complex that forms during the addition of a specific spliced leader (SL) sequence to the 5'-end of a messenger RNA primary transcript, a process which occurs in a number of eukaryotic organisms, including trypanosomatid protozoans, euglenoids, nematodes, trematodes, and chordates.","definition_xrefs":["GOC:krc","ISBN:0879697393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"trans spliceosomal complex","termid":"GO:0071023"}


id: GO:0044012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H2A L-lysine (position 9) = CoA + histone H2A N6-acetyl-L-lysine (position 9).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A acetyltransferase activity","termid":"GO:0043998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0034212","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"histone H2AK9 acetyltransferase activity","synonyms":[{"name":"histone H2A-K9 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H2A-K9 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H2A-K9 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H2A-K9 specific)","type":"exact"}],"termid":"GO:0044012"}


id: GO:0097087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-17A due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","PMID:27901018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-17A production","secondary_identifiers":["GO:0150154"],"synonyms":[{"name":"IL-17A production","type":"exact"},{"name":"interleukin-17A biosynthetic process","type":"narrow"}],"termid":"GO:0097087"}


id: PBO:0086016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to cytosol; conserved among Saccharomyces sensu stricto species","termid":"PBO:0086016"}


id: PATO:0001419
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's terminating in a point or edge.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharpness","termid":"PATO:0000944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sharp","termid":"PATO:0001419"}


id: PBO:0062145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 15","termid":"PBO:0062145"}


id: PBO:0027110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-narrow_cell_fusion_site_following_conjugation_with_cellular_fusion","termid":"PBO:0027110"}


id: PR:O74443
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- laf2 gene.","definition_xrefs":["UniProtKB:O74443","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWIRM domain-containing protein laf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.13","synonyms":[{"name":"Spom972h-laf2","type":"exact"},{"name":"clr6 L-associated factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74443"}


id: PBO:0070912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 20","termid":"PBO:0070912"}


id: PBO:0030942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_microtubule_depolymerization","termid":"PBO:0030942"}


id: GO:0015882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which L-ascorbic acid is transported across a lipid bilayer, from one side of a membrane to the other. L-ascorbate, (2R)-2-[(1S)-1,2-dihydroxyethyl]-4-hydroxy-5-oxo-2,5-dihydrofuran-3-olate, is vitamin C and has co-factor and anti-oxidant activities in many species.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transport","termid":"GO:0015749"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"L-ascorbic acid transmembrane transport","synonyms":[{"name":"L-ascorbate transport","type":"exact"},{"name":"L-ascorbic acid transport","type":"related"},{"name":"vitamin C transport","type":"exact"}],"termid":"GO:0015882"}


id: MONDO:0005041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Increased pressure in the eyeball due to obstruction of the outflow of aqueous humor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma","secondary_identifiers":["ICD9:365.9","MESH:D005901","ICD9:365","MEDGEN:42224","icd11.foundation:499924848","DOID:1686","UMLS:C0017601","ICD9:365.89","HP:0000501","SCTID:23986001","ICD10CM:H40-H42","NCIT:C26782"],"synonyms":[{"name":"glaucoma","type":"exact"},{"name":"glaucoma (disease)","type":"exact"}],"termid":"MONDO:0005041","xrefs":{"Monarch":{"xref_id":"0005041"}}}


id: GO:0050884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism voluntarily modulates its posture, the alignment of its anatomical parts.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular process","termid":"GO:0050905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromuscular process controlling posture","synonyms":[{"name":"regulation of posture","type":"exact"}],"termid":"GO:0050884"}


id: PBO:0031161
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_threonine_import","termid":"PBO:0031161"}


id: PBO:0113221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein; interacts with the UBA domain of mRNA export factor Mex67p; participates in the export of Msn2/4 stress-dependent mRNAs; partially redundant function with paralog PES4 in the steady-state expression, translational timing and localization of a subset of Ndt80-dependent mRNAs that are protected until translated near the end of meiosis II; redundant role with PES4 in sporulation; shuttles between the nucleus and cytoplasm, localizes to stress granules and the prospore membrane","termid":"PBO:0113221"}


id: MONDO:0013253
data:
  {"annotated_genes":["SJAG_02708"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87659],"is_not":false,"summary":null,"term":"MONDO:0013253"}]},"cv_name":"mondo","definition":"Any hereditary breast ovarian cancer syndrome in which the cause of the disease is a mutation in the RAD51C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary breast ovarian cancer syndrome","termid":"MONDO:0003582"},{"relation_name":"is_a","term_name":"breast-ovarian cancer, familial, susceptibility to","termid":"MONDO:0100526"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02708":null},"genotype_count":0,"is_obsolete":false,"name":"breast-ovarian cancer, familial, susceptibility to, 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:462009","OMIM:613399","UMLS:C3150659"],"synonyms":[{"name":"BROVCA3","type":"related"},{"name":"RAD51C hereditary breast ovarian cancer syndrome","type":"exact"},{"name":"Rad51C hereditary breast ovarian cancer syndrome","type":"exact"},{"name":"breast cancer, familial, susceptibility to, 3","type":"related"},{"name":"breast-ovarian cancer, familial, susceptibility to, 3","type":"exact"},{"name":"breast-ovarian cancer, familial, susceptibility to, type 3","type":"exact"},{"name":"hereditary breast ovarian cancer syndrome caused by mutation in RAD51C","type":"exact"},{"name":"hereditary breast ovarian cancer syndrome caused by mutation in Rad51C","type":"exact"},{"name":"ovarian cancer, familial, susceptibility to, 3","type":"related"},{"name":"susceptibility to familial breast-ovarian cancer 3","type":"related"}],"termid":"MONDO:0013253","terms_by_termid":{"MONDO:0013253":null},"xrefs":{"Monarch":{"xref_id":"0013253"}}}


id: GO:0032170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tight ring-shaped structure that forms in the division plane at the junction between the mother cell and a pseudohyphal projection; composed of septins as well as septin-associated proteins.","definition_xrefs":["GOC:krc","PMID:16151244","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"pseudohyphal septin ring","termid":"GO:0032170"}


id: FYPO:0004620
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which spindle disassembly is abnormal. Spindle disassembly is the controlled breakdown of the spindle.","definition_xrefs":["PomBase:mah","GO:0051230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal spindle disassembly","termid":"FYPO:0004620"}


id: GO:1900044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein K63-linked ubiquitination.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein polyubiquitination","termid":"GO:1902914"},{"relation_name":"regulates","term_name":"protein K63-linked ubiquitination","termid":"GO:0070534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein K63-linked ubiquitination","synonyms":[{"name":"regulation of protein K63-linked polyubiquitination","type":"exact"}],"termid":"GO:1900044"}


id: GO:0080156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent alteration within the mitochondrion of one or more nucleotides within an mRNA to produce an mRNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["PMID:20566637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA modification","termid":"GO:0016556"},{"relation_name":"is_a","term_name":"mitochondrial RNA modification","termid":"GO:1900864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"mitochondrial mRNA modification","synonyms":[{"name":"mitochondrial RNA editing","type":"broad"},{"name":"mitochondrial mRNA editing","type":"narrow"}],"termid":"GO:0080156"}


id: GO:0071868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monoamine stimulus. A monoamine is any of a group of molecular messengers that contain one amino group that is connected to an aromatic ring by ethylene group (-CH2-CH2-). Monoamines are derived from the aromatic amino acids phenylalanine, tyrosine, histidine and tryptophan.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to monoamine","termid":"GO:0071867"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to monoamine stimulus","termid":"GO:0071868"}


id: MONDO:0060554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital vertebral-cardiac-renal anomalies syndrome","termid":"MONDO:0020831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0006025"],"is_obsolete":false,"name":"vertebral, cardiac, renal, and limb defects syndrome 1","secondary_identifiers":["OMIM:617660","GARD:18508","MEDGEN:1621146","UMLS:C4540004"],"synonyms":[{"name":"3-hydroxyanthranilic acidemia","type":"related"},{"name":"VCRL1","type":"related"},{"name":"congenital NAD deficiency Disorder 1","type":"related"},{"name":"vertebral, cardiac, renal, and limb defects syndrome 1","type":"exact"}],"termid":"MONDO:0060554","xrefs":{"Monarch":{"xref_id":"0060554"}}}


id: PBO:0059884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 7","termid":"PBO:0059884"}


id: GO:0045892
data:
  {"annotated_genes":["SJAG_03473","SJAG_00142","SJAG_04268","SJAG_04249","SJAG_00861","SJAG_02846","SJAG_03319","SJAG_00969","SJAG_01799","SJAG_02752","SJAG_00926","SJAG_03845","SJAG_04613","SJAG_04026","SJAG_04312","SJAG_01199","SJAG_04539","SJAG_00996","SJAG_00441","SJAG_01254","SJAG_03067","SJAG_01157","SJAG_00290","SJAG_02385","SJAG_03081","SJAG_02858","SJAG_00266","SJAG_04607","SJAG_02104","SJAG_01000","SJAG_02981","SJAG_01680","SJAG_01728","SJAG_02730","SJAG_02898","SJAG_01707","SJAG_04512","SJAG_04921","SJAG_00802","SJAG_00792","SJAG_00987","SJAG_01311","SJAG_00163","SJAG_04039","SJAG_02048","SJAG_00410","SJAG_04381","SJAG_01804","SJAG_02444","SJAG_03143","SJAG_02255","SJAG_04584","SJAG_00124","SJAG_05343","SJAG_01230"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101411],"is_not":false,"summary":null,"term":"GO:0045892"},{"annotations":[108335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"},{"annotations":[75709,87912,94212,77110,77370,104297,104602,106862,107094,108337,112471,79837,91510,92465,109383,101335,117762,93624,94069,95058,74015,103897,113357,114648,99218,70516,80772,102190,108599,104797,114213,107114,91583,111259,94974,74438,74208,106267,74664,106614,111097,72569,94559,111522,93723,96618,72279,92489,106170,108940,73604,70953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000122"},{"annotations":[74065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"},{"annotations":[101336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010621"},{"annotations":[118329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription.","definition_xrefs":["GOC:txnOH","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"is_a","term_name":"negative regulation of RNA biosynthetic process","termid":"GO:1902679"},{"relation_name":"negatively_regulates","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00142":null,"SJAG_00163":null,"SJAG_00266":null,"SJAG_00290":null,"SJAG_00410":null,"SJAG_00441":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00969":null,"SJAG_00987":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01157":null,"SJAG_01199":null,"SJAG_01230":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01680":null,"SJAG_01707":null,"SJAG_01728":null,"SJAG_01799":null,"SJAG_01804":null,"SJAG_02048":null,"SJAG_02104":null,"SJAG_02255":null,"SJAG_02385":null,"SJAG_02444":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02846":null,"SJAG_02858":null,"SJAG_02898":null,"SJAG_02981":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03143":null,"SJAG_03319":null,"SJAG_03473":null,"SJAG_03845":null,"SJAG_04026":null,"SJAG_04039":null,"SJAG_04249":null,"SJAG_04268":null,"SJAG_04312":null,"SJAG_04381":null,"SJAG_04512":null,"SJAG_04539":null,"SJAG_04584":null,"SJAG_04607":null,"SJAG_04613":null,"SJAG_04921":null,"SJAG_05343":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"negative regulation of DNA-templated transcription","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0061021","GO:0032582","GO:0016481"],"synonyms":[{"name":"down regulation of gene-specific transcription","type":"related"},{"name":"down regulation of transcription, DNA-dependent","type":"exact"},{"name":"down-regulation of gene-specific transcription","type":"related"},{"name":"down-regulation of transcription, DNA-dependent","type":"exact"},{"name":"downregulation of gene-specific transcription","type":"related"},{"name":"downregulation of transcription, DNA-dependent","type":"exact"},{"name":"inhibition of gene-specific transcription","type":"related"},{"name":"inhibition of transcription, DNA-dependent","type":"narrow"},{"name":"negative regulation of cellular transcription, DNA-dependent","type":"exact"},{"name":"negative regulation of gene-specific transcription","type":"related"},{"name":"negative regulation of transcription, DNA-dependent","type":"exact"},{"name":"negative regulation of transcription, DNA-templated","type":"exact"},{"name":"transcription repressor activity","type":"related"}],"termid":"GO:0045892","terms_by_termid":{"GO:0000122":null,"GO:0010621":null,"GO:0016480":null,"GO:0034244":null,"GO:0045892":null,"GO:0060195":null}}


id: GO:0002312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature B cell during an immune response, resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation involved in immune response","termid":"GO:0002285"},{"relation_name":"is_a","term_name":"B cell activation","termid":"GO:0042113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell activation involved in immune response","synonyms":[{"name":"B cell activation during immune response","type":"related"},{"name":"B lymphocyte activation during immune response","type":"related"},{"name":"B-cell activation during immune response","type":"related"},{"name":"B-lymphocyte activation during immune response","type":"related"}],"termid":"GO:0002312"}


id: PBO:0086067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that interacts with Ulp1p; a Ubl (ubiquitin-like protein)-specific protease for Smt3p protein conjugates","termid":"PBO:0086067"}


id: MONDO:0968944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 82","secondary_identifiers":["MEDGEN:1858975","DOID:0060947","UMLS:C5935601","OMIM:620779"],"termid":"MONDO:0968944","xrefs":{"Monarch":{"xref_id":"0968944"}}}


id: GO:0007418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ventral midline over time, from its formation to the mature structure. In protostomes (such as insects, snails and worms) as well as deuterostomes (vertebrates), the midline is an embryonic region that functions in patterning of the adjacent nervous tissue. The ventral midline in insects is a cell population extending along the ventral surface of the embryo and is the region from which cells detach to form the ventrally located nerve cords. In vertebrates, the midline is originally located dorsally. During development, it folds inwards and becomes the ventral part of the dorsally located neural tube and is then called the ventral midline, or floor plate.","definition_xrefs":["PMID:12075342","GOC:bf","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral midline development","termid":"GO:0007418"}


id: PBO:0005091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S8 (predicted)","termid":"PBO:0005091"}


id: PBO:0044909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA fragmentation factor subunit alpha","termid":"PBO:0044909"}


id: PBO:0038436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AADACL2 antisense RNA 1","termid":"PBO:0038436"}


id: GO:1902221
data:
  {"annotated_genes":["SJAG_03124","SJAG_02505","SJAG_05007","SJAG_03167","SJAG_01455","SJAG_04652","SJAG_03312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78258,98674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[77545,79565,74593,73651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[77014,79111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving erythrose 4-phosphate/phosphoenolpyruvate family amino acid.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null,"SJAG_03124":null,"SJAG_03167":null,"SJAG_03312":null,"SJAG_04652":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolism","type":"exact"}],"termid":"GO:1902221","terms_by_termid":{"GO:0000162":null,"GO:0006571":null,"GO:0009094":null}}


id: MONDO:0016534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypophysitis","termid":"MONDO:0019835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"infundibulo-neurohypophysitis","secondary_identifiers":["GARD:20632","UMLS:C5190834","MEDGEN:1683829","Orphanet:238305"],"termid":"MONDO:0016534","xrefs":{"Monarch":{"xref_id":"0016534"}}}


id: GO:0043113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The receptor metabolic process that results in grouping of a set of receptors at a cellular location, often to amplify the sensitivity of a signaling response.","definition_xrefs":["GOC:bf","PMID:21453460","GOC:jl","PMID:19747931","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"receptor clustering","termid":"GO:0043113"}


id: POMBASE_GENE_EX_REL:not_exists_during
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not_exists_during","termid":"POMBASE_GENE_EX_REL:not_exists_during"}


id: GO:1901489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of transcription factor catabolism in response to decreased oxygen levels, which results in positive regulation of the SREBP signaling pathway.","definition_xrefs":["PMID:22833559","GOC:TermGenie","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of SREBP signaling pathway by negative regulation of transcription factor catabolic process in response to decreased oxygen levels (obsolete GO:1901489)","synonyms":[{"name":"positive regulation of SREBP signaling by inhibition of SREBP degradation in response to decreased oxygen levels","type":"exact"},{"name":"positive regulation of SREBP signaling by negative regulation of transcription factor catabolism at low oxygen levels","type":"exact"},{"name":"positive regulation of SREBP signaling pathway by negative regulation of SREBP degradation, in response to decreased oxygen","type":"narrow"},{"name":"positive regulation of SREBP-mediated signaling pathway in absence of oxygen by negative regulation of transcription factor catabolic process","type":"related"},{"name":"positive regulation of SREBP-mediated signaling pathway in response to decreased oxygen levels by negative regulation of transcription factor catabolic process","type":"exact"}],"termid":"GO:1901489"}


id: PBO:0079734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 11 (pseudogene)","termid":"PBO:0079734"}


id: PR:O74477
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pca1 gene.","definition_xrefs":["UniProtKB:O74477","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metacaspase-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.04","synonyms":[{"name":"Spom972h-pca1","type":"exact"}],"termid":"PR:O74477"}


id: GO:0010289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the pectidic homogalacturonan, characterized by a backbone of (1->4)-linked alpha-D-GalpA residues that can be methyl-esterified at C-6 and carry acetyl groups on O-2 and O-3.","definition_xrefs":["PMID:12913136","PMID:16540543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homogalacturonan metabolic process","termid":"GO:0010394"},{"relation_name":"is_a","term_name":"cell wall pectin biosynthetic process","termid":"GO:0052325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975","GO:0044085"],"is_obsolete":false,"name":"homogalacturonan biosynthetic process","secondary_identifiers":["MetaCyc:PWY-1061"],"termid":"GO:0010289"}


id: GO:0106332
data:
  {"annotated_genes":["SJAG_05237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101515],"is_not":false,"summary":null,"term":"GO:0106332"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of double-stranded DNA near a double-strand/single-strand DNA junction.","definition_xrefs":["PMID:14528010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA endonuclease activity","termid":"GO:1990238"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0140097","GO:0016787"],"is_obsolete":false,"name":"ds/ssDNA junction-specific dsDNA endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106332","terms_by_termid":{"GO:0106332":null}}


id: PBO:0082680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-I complex; ESCRT-I is involved in ubiquitin-dependent sorting of proteins into the endosome; suppressor of rna1-1 mutation; may be involved in RNA export from nucleus","termid":"PBO:0082680"}


id: MONDO:0015395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital subglottic stenosis","secondary_identifiers":["icd11.foundation:76585642","NANDO:1201004","ICD9:748.3","MEDGEN:97973","Orphanet:141121","UMLS:C0396051","NANDO:2200190","SCTID:204552001","ICD10CM:Q31.1","GARD:19952"],"termid":"MONDO:0015395","xrefs":{"Monarch":{"xref_id":"0015395"}}}


id: GO:0090422
data:
  {"annotated_genes":["SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103981],"is_not":false,"summary":null,"term":"GO:0090422"}]},"cv_name":"molecular_function","definition":"Enables the transfer of thiamine pyrophosphate a substance from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"thiamine transmembrane transporter activity","termid":"GO:0015234"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"thiamine pyrophosphate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8875838"],"synonyms":[{"name":"thiamine diphosphate transporter activity","type":"exact"},{"name":"thiamine pyrophosphate transporter activity","type":"narrow"}],"termid":"GO:0090422","terms_by_termid":{"GO:0090422":null}}


id: MONDO:0010820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of disorders which feature impaired motor control characterized by bradykinesia, muscle rigidity; tremor; and postural instability. Parkinsonian diseases are generally divided into primary parkinsonism (see parkinson disease), secondary parkinsonism (see parkinson disease, secondary) and inherited forms. These conditions are associated with dysfunction of dopaminergic or closely related motor integration neuronal pathways in the basal ganglia.","definition_xrefs":["MESH:D020734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"young-onset Parkinson disease","termid":"MONDO:0017279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive juvenile Parkinson disease 2","secondary_identifiers":["OMIM:600116","GARD:9642","MEDGEN:401500","DOID:0060368","UMLS:C1868675"],"synonyms":[{"name":"JP","type":"related"},{"name":"PARK2","type":"related"},{"name":"PDJ","type":"related"},{"name":"PRKN young-onset Parkinson disease","type":"exact"},{"name":"Parkinson disease 2","type":"related"},{"name":"Parkinson disease 2, autosomal recessive juvenile","type":"related"},{"name":"Parkinson disease autosomal recessive, early onset","type":"related"},{"name":"Parkinson disease, juvenile, autosomal recessive","type":"related"},{"name":"Parkinson disease, juvenile, type 2","type":"exact"},{"name":"Parkinsonism, early onset, with diurnal fluctuation","type":"related"},{"name":"Parkinsonism, early-onset, with diurnal fluctuation","type":"related"},{"name":"autosomal recessive juvenile Parkinson disease","type":"related"},{"name":"autosomal recessive juvenile Parkinson disease 2","type":"exact"},{"name":"autosomal recessive juvenile Parkinson disease type 2","type":"exact"},{"name":"autosomal recessive juvenile Parkinson's disease 2","type":"related"},{"name":"juvenile parkinsonism","type":"related"},{"name":"young-onset Parkinson disease caused by mutation in PRKN","type":"exact"}],"termid":"MONDO:0010820","xrefs":{"Monarch":{"xref_id":"0010820"}}}


id: GO:0099150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic specialization assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynaptic specialization.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"postsynaptic specialization assembly","termid":"GO:0098698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic specialization assembly","termid":"GO:0099150"}


id: PBO:0038669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACSL3 pseudogene 1","termid":"PBO:0038669"}


id: PBO:0086118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for delivery of copper to Cox1p; mitochondrial inner membrane protein; association with mitochondrial ribosomes suggests that copper delivery may occur during translation of Cox1p","termid":"PBO:0086118"}


id: PBO:0039646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP1B1 pseudogene 2","termid":"PBO:0039646"}


id: PBO:0003963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase phi","termid":"PBO:0003963"}


id: PBO:0001236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Cdc42","termid":"PBO:0001236"}


id: PBO:0078286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 19-1","termid":"PBO:0078286"}


id: PBO:0030978
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere","termid":"PBO:0030978"}


id: MONDO:0013918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"15q overgrowth syndrome","termid":"MONDO:0017806"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal tetrasomy 15q","secondary_identifiers":["Orphanet:314588","GARD:17424","OMIM:614846","UMLS:C3553858","MEDGEN:766772"],"synonyms":[{"name":"distal tetrasomy type 15q","type":"exact"},{"name":"levy-Shanske syndrome","type":"related"},{"name":"tetrasomy 15(q25-qter)","type":"exact"},{"name":"tetrasomy 15q26","type":"exact"},{"name":"tetrasomy type 15Q26","type":"exact"}],"termid":"MONDO:0013918","xrefs":{"Monarch":{"xref_id":"0013918"}}}


id: MONDO:0016168
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013766"}]},"cv_name":"mondo","definition":"Cryopyrin associated periodic syndrome (CAPS) defines a group of autoinflammatory diseases, characterized by recurrent episodes of systemic inflammatory attacks in the absence of infection or autoimmune disease. CAPS comprises 3 disorders on a continuum of severity: severe CINCA syndrome, intermediate Muckle-Wells syndrome (MWS) and milder familial cold urticaria (FCAS).","definition_xrefs":["Orphanet:208650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"hereditary periodic fever syndrome","termid":"MONDO:0017953"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cryopyrin-associated periodic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:430079001","icd11.foundation:2139918612","ICD9:759.89","MEDGEN:412215","UMLS:C2316212","GARD:10927","NCIT:C84657","NANDO:1200465","MESH:D056587","NANDO:2200432","MedDRA:10068850"],"synonyms":[{"name":"Cryopyrinopathy","type":"exact"},{"name":"caps","type":"broad"}],"termid":"MONDO:0016168","terms_by_termid":{"MONDO:0013766":null},"xrefs":{"Monarch":{"xref_id":"0016168"}}}


id: MONDO:0012898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"narcolepsy, susceptibility to","termid":"MONDO:0100049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy 4, susceptibility to","secondary_identifiers":["OMIM:612417","MEDGEN:391001","UMLS:C2676275"],"synonyms":[{"name":"NRCLP4","type":"exact"},{"name":"narcolepsy 4","type":"related"},{"name":"narcolepsy 4, susceptibility to","type":"exact"}],"termid":"MONDO:0012898","xrefs":{"Monarch":{"xref_id":"0012898"}}}


id: GO:0048244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + O2 + phytanoyl-CoA = 2-hydroxyphytanoyl-CoA + CO2 + succinate.","definition_xrefs":["EC:1.14.11.18","RHEA:16065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phytanoyl-CoA dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R05722","MetaCyc:1.14.11.18-RXN","Reactome:R-HSA-389639"],"synonyms":[{"name":"phytanoyl-CoA 2 oxoglutarate dioxygenase activity","type":"related"},{"name":"phytanoyl-CoA 2-hydroxylase activity","type":"related"},{"name":"phytanoyl-CoA alpha-hydroxylase activity","type":"related"},{"name":"phytanoyl-CoA hydroxylase activity","type":"related"},{"name":"phytanoyl-CoA, 2-oxoglutarate:oxygen oxidoreductase (2-hydroxylating)","type":"related"}],"termid":"GO:0048244"}


id: PBO:0039984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 5C","termid":"PBO:0039984"}


id: MONDO:0022407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinal ciliopathy due to mutation in Bardet-Biedl gene (obsolete MONDO:0022407)","secondary_identifiers":["Orphanet:156183"],"termid":"MONDO:0022407","xrefs":{"Monarch":{"xref_id":"0022407"}}}


id: PBO:0041738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathelicidin antimicrobial peptide","termid":"PBO:0041738"}


id: PR:Q9Y7S1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC569.02c gene.","definition_xrefs":["UniProtKB:Q9Y7S1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0321 protein C569.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC569.02c","synonyms":[{"name":"Spom972h-SPCC569.02c","type":"exact"}],"termid":"PR:Q9Y7S1"}


id: MONDO:0006142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small cell carcinoma arising from the cervix.","definition_xrefs":["NCIT:C7982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"cervical carcinoma","termid":"MONDO:0005131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical small cell carcinoma","secondary_identifiers":["ONCOTREE:SCCE","DOID:6740","UMLS:C0279674","MEDGEN:79025","EFO:1000171"],"synonyms":[{"name":"Cervical small cell cancer","type":"exact"},{"name":"SCCE","type":"related"},{"name":"cervical small cell carcinoma","type":"exact"},{"name":"cervix small cell carcinoma","type":"exact"},{"name":"cervix uteri small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of cervix","type":"exact"},{"name":"small cell carcinoma of cervix uteri","type":"exact"},{"name":"small cell carcinoma of the cervix","type":"exact"},{"name":"small cell carcinoma of the cervix uteri","type":"exact"},{"name":"small cell carcinoma of the uterine cervix","type":"exact"},{"name":"small cell carcinoma of uterine cervix","type":"exact"},{"name":"uterine cervix small cell carcinoma","type":"exact"}],"termid":"MONDO:0006142","xrefs":{"Monarch":{"xref_id":"0006142"}}}


id: GO:0050025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + O2 + H2O = 2-oxoglutarate + NH3 + H2O2.","definition_xrefs":["RHEA:20728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid oxidase activity","termid":"GO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-glutamate oxidase activity","secondary_identifiers":["EC:1.4.3.11","MetaCyc:L-GLUTAMATE-OXIDASE-RXN"],"synonyms":[{"name":"L-glutamate:oxygen oxidoreductase (deaminating)","type":"related"},{"name":"L-glutamic acid oxidase activity","type":"related"},{"name":"glutamate (acceptor) dehydrogenase activity","type":"related"},{"name":"glutamate oxidase activity","type":"related"},{"name":"glutamic acid oxidase activity","type":"related"},{"name":"glutamic dehydrogenase (acceptor)","type":"related"}],"termid":"GO:0050025"}


id: PBO:0087557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of SEACAT, a subcomplex of the SEA complex; Rtc1p, along with Mtc5p and Sea4p, redundantly inhibit the TORC1 inhibitory role of the Iml1p/SEACIT (Iml1p-Npr2p-Npr3p) subcomplex, a GAP for GTPase Gtr1p (EGOC subunit) in response to amino acid limitation, thereby resulting in activation of TORC1 signaling; SEA is a coatomer-related complex that associates dynamically with the vacuole; has N-terminal WD-40 repeats and a C-terminal RING motif; null suppresses cdc13-1","termid":"PBO:0087557"}


id: PBO:0064473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon 4, accessory subunit","termid":"PBO:0064473"}


id: PBO:0068350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 126 pseudogene 1","termid":"PBO:0068350"}


id: PBO:0085881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; interacts with both the Reg1p/Glc7p phosphatase and the Snf1p kinase; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0085881"}


id: GO:0048256
data:
  {"annotated_genes":["SJAG_01648","SJAG_05237","SJAG_04183","SJAG_03994","SJAG_01173","SJAG_01832","SJAG_01044"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[73179,74908,71692,66732,75955,78687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a flap structure in DNA, but not other DNA structures; processes the ends of Okazaki fragments in lagging strand DNA synthesis.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"},{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01044":null,"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_03994":null,"SJAG_04183":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0140097","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"flap endonuclease activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0048256","terms_by_termid":{"GO:0017108":null,"GO:0048257":null}}


id: MONDO:0018395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete male infertility due to sperm motility disorder (obsolete MONDO:0018395)","secondary_identifiers":["Orphanet:399813"],"synonyms":[{"name":"Male infertility due to asthenozoospermia","type":"exact"}],"termid":"MONDO:0018395","xrefs":{"Monarch":{"xref_id":"0018395"}}}


id: FYPO:0003067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which stalled replication forks are unwound four-stranded structures resembling Holliday junctions, but are not subsequently resolved correctly.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal replication fork reversal","synonyms":[{"name":"abnormal replication fork reversal during mitotic cell cycle","type":"related"},{"name":"abnormal replication fork reversal during vegetative growth","type":"exact"}],"termid":"FYPO:0003067"}


id: PBO:0028553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_during_mitotic_interphase,_with_protein_mislocalized_to_cytoplasmic_foci","termid":"PBO:0028553"}


id: FYPO:0002118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a specified transporter activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0002114","FYPO:0001985"],"is_obsolete":false,"name":"decreased transporter activity","synonyms":[{"name":"reduced transporter activity","type":"exact"}],"termid":"FYPO:0002118"}


id: PR:O94287
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC887.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized chloride channel protein C887.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.02","synonyms":[{"name":"Spom972h-SPBC887.02","type":"exact"}],"termid":"PR:O94287"}


id: GO:0071901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of protein serine/threonine kinase activity.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"},{"relation_name":"is_a","term_name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein serine/threonine kinase activity","termid":"GO:0071901"}


id: PBO:0116581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR89 family, implicated in ribosome biogenesis","termid":"PBO:0116581"}


id: GO:0050220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H(2) = prostaglandin E(2).","definition_xrefs":["EC:5.3.99.3","RHEA:12893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"prostaglandin-E synthase activity","secondary_identifiers":["MetaCyc:PROSTAGLANDIN-E-SYNTHASE-RXN","KEGG_REACTION:R02265","Reactome:R-HSA-2161660","Reactome:R-HSA-265295"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate E-isomerase activity","type":"related"},{"name":"PGE isomerase activity","type":"related"},{"name":"PGE2 isomerase activity","type":"related"},{"name":"PGH-PGE isomerase activity","type":"related"},{"name":"Prostaglandin-H(2) E-isomerase activity","type":"related"},{"name":"endoperoxide isomerase activity","type":"related"},{"name":"prostaglandin H-E isomerase activity","type":"related"},{"name":"prostaglandin R-prostaglandin E isomerase activity","type":"related"},{"name":"prostaglandin endoperoxide E isomerase activity","type":"related"},{"name":"prostaglandin endoperoxide E2 isomerase activity","type":"related"},{"name":"prostaglandin-H2 E-isomerase activity","type":"related"}],"termid":"GO:0050220"}


id: MONDO:0012680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the GLIS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"nephronophthisis 7","secondary_identifiers":["MESH:C566930","OMIM:611498","UMLS:C1969092","DOID:0111116","MEDGEN:369409"],"synonyms":[{"name":"GLIS2 nephronophthisis (disease)","type":"exact"},{"name":"NPHP7","type":"exact"},{"name":"nephronophthisis (disease) caused by mutation in GLIS2","type":"exact"},{"name":"nephronophthisis 7","type":"exact"},{"name":"nephronophthisis type 7","type":"exact"}],"termid":"MONDO:0012680","xrefs":{"Monarch":{"xref_id":"0012680"}}}


id: PBO:0089364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoamyl acetate hydrolytic enzyme Iah1","termid":"PBO:0089364"}


id: PBO:0072831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP18 pseudogene 1","termid":"PBO:0072831"}


id: GO:0016616
data:
  {"annotated_genes":["SJAG_03370","SJAG_01298","SJAG_04048","SJAG_00409","SJAG_02696","SJAG_01432","SJAG_02010","SJAG_03715","SJAG_02313","SJAG_03562","SJAG_00240","SJAG_05033","SJAG_02963","SJAG_01137","SJAG_02148","SJAG_00337","SJAG_00630","SJAG_00593","SJAG_02855","SJAG_01457","SJAG_00491","SJAG_01869","SJAG_00237","SJAG_01036","SJAG_01012","SJAG_03958","SJAG_03152","SJAG_00242","SJAG_04376","SJAG_03196","SJAG_04972","SJAG_04458","SJAG_04362","SJAG_03098","SJAG_00038","SJAG_00502","SJAG_03198","SJAG_04660","SJAG_01543","SJAG_01414","SJAG_03821","SJAG_03235","SJAG_02488","SJAG_03804","SJAG_00396","SJAG_01753","SJAG_02176","SJAG_02960","SJAG_03852","SJAG_02297","SJAG_03822","SJAG_00281"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68752,70845,103077,104270],"is_not":false,"summary":null,"term":"GO:0016616"},{"annotations":[71294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000253"},{"annotations":[110457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000252"},{"annotations":[73364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047560"},{"annotations":[75181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003862"},{"annotations":[58570,97495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004316"},{"annotations":[66156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008703"},{"annotations":[71899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000140"},{"annotations":[71553,78491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004022"},{"annotations":[106903,92802,106902,77860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008106"},{"annotations":[92143,74543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004032"},{"annotations":[80603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008720"},{"annotations":[101522,96086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032866"},{"annotations":[105409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046526"},{"annotations":[99063,99064,115003,115002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120542"},{"annotations":[118849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047935"},{"annotations":[59755,62743,68429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004345"},{"annotations":[88930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008888"},{"annotations":[69606,62975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141152"},{"annotations":[75521,75631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030267"},{"annotations":[80634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004399"},{"annotations":[70994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047046"},{"annotations":[71507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004412"},{"annotations":[72125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004420"},{"annotations":[75632,75522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016618"},{"annotations":[75212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003938"},{"annotations":[92146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047018"},{"annotations":[92147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047019"},{"annotations":[74221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004450"},{"annotations":[77341],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004455"},{"annotations":[96087,101523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032867"},{"annotations":[73030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003939"},{"annotations":[74511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030060"},{"annotations":[73565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004471"},{"annotations":[105406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043892"},{"annotations":[80725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004616"},{"annotations":[64892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004617"},{"annotations":[114780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050236"},{"annotations":[103820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106322"},{"annotations":[103821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106321"},{"annotations":[103822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080007"},{"annotations":[108892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004757"},{"annotations":[60148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004764"},{"annotations":[69301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141040"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.","definition_xrefs":["EC:1.1.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00038":null,"SJAG_00237":null,"SJAG_00240":null,"SJAG_00242":null,"SJAG_00281":null,"SJAG_00337":null,"SJAG_00396":null,"SJAG_00409":null,"SJAG_00491":null,"SJAG_00502":null,"SJAG_00593":null,"SJAG_00630":null,"SJAG_01012":null,"SJAG_01036":null,"SJAG_01137":null,"SJAG_01298":null,"SJAG_01414":null,"SJAG_01432":null,"SJAG_01457":null,"SJAG_01543":null,"SJAG_01753":null,"SJAG_01869":null,"SJAG_02010":null,"SJAG_02148":null,"SJAG_02176":null,"SJAG_02297":null,"SJAG_02313":null,"SJAG_02488":null,"SJAG_02696":null,"SJAG_02855":null,"SJAG_02960":null,"SJAG_02963":null,"SJAG_03098":null,"SJAG_03152":null,"SJAG_03196":null,"SJAG_03198":null,"SJAG_03235":null,"SJAG_03370":null,"SJAG_03562":null,"SJAG_03715":null,"SJAG_03804":null,"SJAG_03821":null,"SJAG_03822":null,"SJAG_03852":null,"SJAG_03958":null,"SJAG_04048":null,"SJAG_04362":null,"SJAG_04376":null,"SJAG_04458":null,"SJAG_04660":null,"SJAG_04972":null,"SJAG_05033":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-9027632","Reactome:R-HSA-9027625","Reactome:R-HSA-975629","Reactome:R-HSA-9027631"],"termid":"GO:0016616","terms_by_termid":{"GO:0000140":null,"GO:0000252":null,"GO:0000253":null,"GO:0003862":null,"GO:0003938":null,"GO:0003939":null,"GO:0004022":null,"GO:0004032":null,"GO:0004316":null,"GO:0004345":null,"GO:0004399":null,"GO:0004412":null,"GO:0004420":null,"GO:0004450":null,"GO:0004455":null,"GO:0004471":null,"GO:0004616":null,"GO:0004617":null,"GO:0004757":null,"GO:0004764":null,"GO:0008106":null,"GO:0008703":null,"GO:0008720":null,"GO:0008888":null,"GO:0016616":null,"GO:0016618":null,"GO:0030060":null,"GO:0030267":null,"GO:0032866":null,"GO:0032867":null,"GO:0043892":null,"GO:0046526":null,"GO:0047018":null,"GO:0047019":null,"GO:0047046":null,"GO:0047560":null,"GO:0047935":null,"GO:0050236":null,"GO:0080007":null,"GO:0106321":null,"GO:0106322":null,"GO:0120542":null,"GO:0141040":null,"GO:0141152":null}}


id: PBO:0049370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA","termid":"PBO:0049370"}


id: PBO:0064452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-fucosyltransferase 1","termid":"PBO:0064452"}


id: PBO:0090832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone Spt6","termid":"PBO:0090832"}


id: MONDO:0007798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Adult hypophosphatasia (A-HPP) is a mildform of hypophosphatasia characterized by osteomalacia, chondrocalcinosis, osteoarthropathy, stress fractures duringmiddle age, and dental anomalies.","definition_xrefs":["Orphanet:247676"],"gene_count":0,"genotype_count":0,"name":"obsolete adult hypophosphatasia (obsolete MONDO:0007798)","secondary_identifiers":["ICD10CM:E83.3","OMIM:146300","DOID:0110913","SCTID:20756002"],"synonyms":[{"name":"adult Rathburn disease","type":"exact"},{"name":"adult phosphoethanolaminuria","type":"exact"},{"name":"hypophosphatasia of adults","type":"exact"},{"name":"hypophosphatasia, ADULT","type":"related"},{"name":"hypophosphatasia, mild","type":"related"},{"name":"mild hypophosphatasia","type":"related"},{"name":"obsolete adult hypophosphatasia","type":"exact"},{"name":"odontohypophosphatasia","type":"related"}],"termid":"MONDO:0007798","xrefs":{"Monarch":{"xref_id":"0007798"}}}


id: FYPO:0005715
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which activation of an inactive protein kinase activity begins later than normal during mitosis.","definition_xrefs":["PomBase:mah","PMID:8978687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"delayed activation of protein kinase activity during mitosis","synonyms":[{"name":"delayed activation of protein kinase activity during M phase of mitotic cell cycle","type":"related"},{"name":"delayed activation of protein kinase activity during mitosis during vegetative growth","type":"exact"},{"name":"delayed activation of protein kinase activity during mitotic M phase","type":"related"},{"name":"delayed activation of protein kinase activity during mitotic M-phase","type":"related"},{"name":"delayed onset of activation of protein kinase activity during mitosis","type":"exact"}],"termid":"FYPO:0005715"}


id: GO:1904669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ATP out of a cell or organelle.","definition_xrefs":["GO_REF:0000074","GOC:TermGenie","PMID:24286344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP transport","termid":"GO:0015867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"ATP export","synonyms":[{"name":"ATP efflux","type":"related"}],"termid":"GO:1904669"}


id: GO:0001196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mating-type specific process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mating-type specific transcription from RNA polymerase II promoter (obsolete GO:0001196)","termid":"GO:0001196"}


id: GO:0004166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + dolichyl phosphate = UDP + dolichyl N-acetyl-alpha-D-glucosaminyl phosphate.","definition_xrefs":["EC:2.4.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"dolichyl-phosphate alpha-N-acetylglucosaminyltransferase activity","secondary_identifiers":["GO:0004101","RHEA:14693","MetaCyc:2.4.1.153-RXN"],"synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:dolichyl-phosphate alpha-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine-dolichol phosphate N-acetylglucosaminyltransferase activity","type":"related"},{"name":"dolichyl phosphate N-acetylglucosaminyltransferase activity","type":"related"},{"name":"dolichyl phosphate acetylglucosaminyltransferase activity","type":"related"},{"name":"dolichyl-phosphate N-acetylglucosaminyltransferase activity","type":"related"},{"name":"dolichyl-phosphate acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-dolichol phosphate acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0004166"}


id: GO:1900904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hexadecanal biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of hexadecanal biosynthetic process","termid":"GO:1900902"},{"relation_name":"is_a","term_name":"positive regulation of hexadecanal metabolic process","termid":"GO:1900907"},{"relation_name":"positively_regulates","term_name":"hexadecanal biosynthetic process","termid":"GO:0006634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hexadecanal biosynthetic process","synonyms":[{"name":"activation of hexadecanal anabolism","type":"narrow"},{"name":"activation of hexadecanal biosynthesis","type":"narrow"},{"name":"activation of hexadecanal biosynthetic process","type":"narrow"},{"name":"activation of hexadecanal formation","type":"narrow"},{"name":"activation of hexadecanal synthesis","type":"narrow"},{"name":"activation of palmitaldehyde biosynthesis","type":"narrow"},{"name":"activation of palmitaldehyde biosynthetic process","type":"related"},{"name":"positive regulation of hexadecanal anabolism","type":"related"},{"name":"positive regulation of hexadecanal biosynthesis","type":"related"},{"name":"positive regulation of hexadecanal formation","type":"related"},{"name":"positive regulation of hexadecanal synthesis","type":"related"},{"name":"positive regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"positive regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"up regulation of hexadecanal anabolism","type":"related"},{"name":"up regulation of hexadecanal biosynthesis","type":"related"},{"name":"up regulation of hexadecanal biosynthetic process","type":"exact"},{"name":"up regulation of hexadecanal formation","type":"related"},{"name":"up regulation of hexadecanal synthesis","type":"related"},{"name":"up regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"up regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"up-regulation of hexadecanal anabolism","type":"related"},{"name":"up-regulation of hexadecanal biosynthesis","type":"related"},{"name":"up-regulation of hexadecanal biosynthetic process","type":"exact"},{"name":"up-regulation of hexadecanal formation","type":"related"},{"name":"up-regulation of hexadecanal synthesis","type":"related"},{"name":"up-regulation of palmitaldehyde biosynthesis","type":"related"},{"name":"up-regulation of palmitaldehyde biosynthetic process","type":"related"},{"name":"upregulation of hexadecanal anabolism","type":"related"},{"name":"upregulation of hexadecanal biosynthesis","type":"related"},{"name":"upregulation of hexadecanal biosynthetic process","type":"exact"},{"name":"upregulation of hexadecanal formation","type":"related"},{"name":"upregulation of hexadecanal synthesis","type":"related"},{"name":"upregulation of palmitaldehyde biosynthesis","type":"related"},{"name":"upregulation of palmitaldehyde biosynthetic process","type":"related"}],"termid":"GO:1900904"}


id: PBO:0079899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UQCR10 pseudogene 1","termid":"PBO:0079899"}


id: GO:0140486
data:
  {"annotated_genes":["SJAG_01803","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94102,94103],"is_not":false,"summary":null,"term":"GO:0140486"}]},"cv_name":"molecular_function","definition":"Binding to a zinc ion to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:12050156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sequestering activity","termid":"GO:0140487"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140313","GO:0003674"],"is_obsolete":false,"name":"zinc ion sequestering activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140486","terms_by_termid":{"GO:0140486":null}}


id: PBO:0072074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 4","termid":"PBO:0072074"}


id: PBO:0063333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2","termid":"PBO:0063333"}


id: GO:0046423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z,13S,15Z)-12,13-epoxyoctadeca-9,11,15-trienoate = (15Z)-12-oxophyto-10,15-dienoate.","definition_xrefs":["EC:5.3.99.6","RHEA:22592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853","GO:0009975"],"is_obsolete":false,"name":"allene-oxide cyclase activity","secondary_identifiers":["KEGG_REACTION:R03402","MetaCyc:ALLENE-OXIDE-CYCLASE-RXN"],"synonyms":[{"name":"(9Z)-(13S)-12,13-epoxyoctadeca-9,11,15-trienoate isomerase (cyclizing)","type":"related"}],"termid":"GO:0046423"}


id: PBO:0049073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 89B","termid":"PBO:0049073"}


id: PBO:0086322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to hexose transporter family members; expression is induced in low glucose and repressed in high glucose; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086322"}


id: GO:0003155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of any member of the BMP (bone morphogenetic protein) family binding to a cell surface receptor that contributes to the determination of lateral mesoderm left/right asymmetry.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete BMP signaling pathway involved in determination of lateral mesoderm left/right asymmetry (obsolete GO:0003155)","synonyms":[{"name":"BMP signaling pathway involved in lateral mesoderm left/right asymmetry determination","type":"exact"},{"name":"BMP signalling pathway involved in determination of lateral mesoderm left/right asymmetry","type":"exact"}],"termid":"GO:0003155"}


id: PBO:0074665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 51","termid":"PBO:0074665"}


id: MOD:01493
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ4plex-115 reporter+balance group.","definition_xrefs":["Unimod:533#N-term","OMSSA:170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated N-terminal","termid":"MOD:01711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-115 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ115","type":"related"},{"name":"iTRAQ115nterm","type":"exact"},{"name":"iTRAQ4plex115","type":"related"}],"termid":"MOD:01493"}


id: PBO:0027436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nonsense-mediated_decay","termid":"PBO:0027436"}


id: PBO:0059655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 21","termid":"PBO:0059655"}


id: MONDO:0012829
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 3p21.3","definition_xrefs":["DOID:0110887","PMID:17804789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 12","secondary_identifiers":["MEDGEN:436861","MESH:C567388","OMIM:612241","UMLS:C2677105"],"synonyms":[{"name":"IBD12","type":"exact"},{"name":"inflammatory bowel disease 12","type":"exact"},{"name":"inflammatory bowel disease type 12","type":"exact"}],"termid":"MONDO:0012829","xrefs":{"Monarch":{"xref_id":"0012829"}}}


id: MONDO:0019578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nodular lichen myxedematosus is a rare form of localized lichen myxedematosus characterized by the development of skin-coloured mucinous nodules on the limbs and trunk, with mild or absent papular eruption.","definition_xrefs":["Orphanet:90393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized lichen myxedematosus","termid":"MONDO:0019446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"nodular lichen myxedematosus","secondary_identifiers":["MEDGEN:894327","SCTID:717257000","GARD:19137","UMLS:C4273968"],"synonyms":[{"name":"atypical tuberous myxedema of Jadassohn-Dosseker","type":"exact"}],"termid":"MONDO:0019578","xrefs":{"Monarch":{"xref_id":"0019578"}}}


id: PBO:0082313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Assembly factor for the eIF2 translation initiation factor complex; regulates translational initiation; conserved residues of this ATP-Grasp protein that bind to ATP-Mg2+ in the pombe ortholog are required for complex assembly in budding yeast; interaction with eIF2 subunit Gcd11p facilitates complex assembly and activity; required for the START transition and timely progression through G2; regulated by nutrient availability; human ortholog complements the yeast mutant","termid":"PBO:0082313"}


id: MONDO:0000305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fusariosis (obsolete MONDO:0000305)","termid":"MONDO:0000305","xrefs":{"Monarch":{"xref_id":"0000305"}}}


id: GO:0016432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + tRNA uridine = 5'-methylthioadenosine + tRNA 3-(3-amino-3-carboxypropyl)-uridine.","definition_xrefs":["EC:2.5.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0140098","GO:0016765","GO:0003674","GO:0140101"],"is_obsolete":false,"name":"tRNA-uridine aminocarboxypropyltransferase activity","secondary_identifiers":["MetaCyc:2.5.1.25-RXN","RHEA:12300"],"synonyms":[{"name":"S-adenosyl-L-methionine:tRNA-uridine 3-(3-amino-3-carboxypropyl)transferase activity","type":"related"}],"termid":"GO:0016432"}


id: PBO:0078027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 17","termid":"PBO:0078027"}


id: MONDO:0032819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypothyroidism, congenital, nongoitrous","termid":"MONDO:0000045"},{"relation_name":"is_a","term_name":"central congenital hypothyroidism","termid":"MONDO:0016410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothyroidism, congenital, nongoitrous, 7","secondary_identifiers":["UMLS:C1861106","GARD:16914","SCTID:725462002","DOID:0111836","MEDGEN:349957","OMIM:618573","Orphanet:99832"],"synonyms":[{"name":"CHNG7","type":"related"},{"name":"HYPOTHYROIDISM, CONGENITAL, NONGOITROUS, 7","type":"related"},{"name":"TRH resistance syndrome","type":"exact"},{"name":"central hypothyroidism due to TRH receptor deficiency","type":"exact"},{"name":"hypothyroidism, congenital, nongoitrous, 7","type":"exact"},{"name":"resistance to thyrotropin-releasing hormone syndrome","type":"exact"},{"name":"thyrotropin-releasing hormone resistance, generalised","type":"related"},{"name":"thyrotropin-releasing hormone resistance, generalized","type":"related"}],"termid":"MONDO:0032819","xrefs":{"Monarch":{"xref_id":"0032819"}}}


id: GO:1990770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry in the intestine between the stomach and the large intestine.","definition_xrefs":["PMID:11991626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"},{"relation_name":"part_of","term_name":"intestine smooth muscle contraction","termid":"GO:0014827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"small intestine smooth muscle contraction","termid":"GO:1990770"}


id: PBO:0089616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial hydrogen/potassium transport system protein","termid":"PBO:0089616"}


id: PBO:0085932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; completely overlaps the verified gene YJL077C/ICS3","termid":"PBO:0085932"}


id: GO:0031767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a gastric inhibitory polypeptide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"gastric inhibitory polypeptide receptor binding","synonyms":[{"name":"gastric inhibitory polypeptide receptor ligand","type":"narrow"}],"termid":"GO:0031767"}


id: GO:0099564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic transmission via modification of the structure of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification of synaptic structure","termid":"GO:0099563"},{"relation_name":"regulates","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"modification of synaptic structure, modulating synaptic transmission","termid":"GO:0099564"}


id: MONDO:0044705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the mucosal epithelial surface of the ethmoid, frontal, maxillary, or sphenoid sinus. Patients may present with nasal fullness, obstruction, and/or epistaxis.","definition_xrefs":["NCIT:C8193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus carcinoma","termid":"MONDO:0000380"},{"relation_name":"is_a","term_name":"bone squamous cell carcinoma","termid":"MONDO:0000514"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"paranasal sinus squamous cell carcinoma","secondary_identifiers":["UMLS:C0280334","GARD:17927","MEDGEN:79105","Orphanet:500464"],"synonyms":[{"name":"epidermoid carcinoma of paranasal sinus","type":"exact"},{"name":"epidermoid carcinoma of the paranasal sinus","type":"exact"},{"name":"paranasal sinus epidermoid carcinoma","type":"exact"},{"name":"paranasal sinus squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of paranasal sinus","type":"exact"},{"name":"squamous cell carcinoma of the nasal cavity and paranasal sinuses","type":"related"},{"name":"squamous cell carcinoma of the nasal cavity and sinuses","type":"exact"},{"name":"squamous cell carcinoma of the paranasal sinus","type":"exact"}],"termid":"MONDO:0044705","xrefs":{"Monarch":{"xref_id":"0044705"}}}


id: MONDO:0020721
data:
  {"annotated_genes":["SJAG_03961"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87050],"is_not":false,"summary":null,"term":"MONDO:0020721"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"inborn disorder of porphyrin metabolism","termid":"MONDO:0017754"},{"relation_name":"is_a","term_name":"inherited sideroblastic anemia","termid":"MONDO:0020099"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03961":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"X-linked sideroblastic anemia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1638704","GARD:9456","SCTID:62677000","MESH:C536761","Orphanet:75563","OMIM:300751","UMLS:C4551511","DOID:0060063"],"synonyms":[{"name":"ANH1","type":"related"},{"name":"SIDBA1","type":"related"},{"name":"X chromosome-linked sideroblastic anaemia","type":"related"},{"name":"X chromosome-linked sideroblastic anemia","type":"related"},{"name":"X-linked sideroblastic anaemia","type":"exact"},{"name":"X-linked sideroblastic anemia","type":"exact"},{"name":"XLSA","type":"exact"},{"name":"anaemia hereditary sideroblastic","type":"related"},{"name":"anaemia sex-linked hypochromic sideroblastic","type":"related"},{"name":"anemia hereditary sideroblastic","type":"related"},{"name":"anemia sex-linked hypochromic sideroblastic","type":"related"},{"name":"anemia, hereditary sideroblastic","type":"related"},{"name":"anemia, hypochromic","type":"related"},{"name":"anemia, sideroblastic, 1","type":"related"},{"name":"anemia, sideroblastic, 1, X-linked recessive","type":"exact"},{"name":"anemia, sideroblastic, X-linked","type":"related"},{"name":"erythroid 5-aminolevulinate synthase deficiency","type":"related"},{"name":"hereditary iron-loading Anaemia","type":"related"},{"name":"hereditary iron-loading Anemia","type":"related"},{"name":"sideroblastic anaemia X-linked","type":"related"},{"name":"sideroblastic anemia X-linked","type":"related"},{"name":"sideroblastic anemia, X-linked","type":"exact"}],"termid":"MONDO:0020721","terms_by_termid":{"MONDO:0020721":null},"xrefs":{"Monarch":{"xref_id":"0020721"}}}


id: PBO:0068871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 111, pseudogene","termid":"PBO:0068871"}


id: PBO:0112986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase; catalyzes trichothecene 3-O-acetylation, suggesting a possible role in trichothecene biosynthesis; localized to peroxisomes","termid":"PBO:0112986"}


id: GO:0097467
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal inflated portion of the axon of a non-glutamatergic neuron, containing the specialized apparatus necessary to release neurotransmitters at a regulatory synapse. The axon terminus is considered to be the whole region of thickening and the terminal bouton is a specialized region of it. Type III terminal boutons are larger than type II ones.","definition_xrefs":["GOC:mc","PMID:10218156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type III terminal bouton","synonyms":[{"name":"type III terminal button","type":"exact"}],"termid":"GO:0097467"}


id: PBO:0055439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2870","termid":"PBO:0055439"}


id: PBO:0004670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine) methyltransferase (predicted)","termid":"PBO:0004670"}


id: MONDO:0012721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive myoclonic epilepsy in which the cause of the disease is a mutation in the KCTD7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis","termid":"MONDO:0016295"},{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0002561","MONDO:0024322","MONDO:0005066","MONDO:0005027","MONDO:0002320","MONDO:0005559"],"is_obsolete":false,"name":"progressive myoclonic epilepsy type 3","secondary_identifiers":["MESH:C567095","icd11.foundation:383417276","GARD:2167","Orphanet:263516","UMLS:C2673257","OMIM:611726","DOID:0111446","MEDGEN:388595","SCTID:783064000"],"synonyms":[{"name":"EPM 3","type":"related"},{"name":"EPM3","type":"exact"},{"name":"KCTD7 progressive myoclonic epilepsy","type":"exact"},{"name":"PME type 3","type":"exact"},{"name":"ceroid lipofuscinosis, neuronal, 14","type":"related"},{"name":"epilepsy progressive myoclonic type 3","type":"related"},{"name":"epilepsy, progressive myoclonic 3, with or without intracellular inclusions","type":"exact"},{"name":"epilepsy, progressive myoclonic, 3, with or without intracellular inclusions","type":"related"},{"name":"progressive myoclonic epilepsy 3","type":"related"},{"name":"progressive myoclonic epilepsy caused by mutation in KCTD7","type":"exact"},{"name":"progressive myoclonic epilepsy due to KCTD7 deficiency","type":"exact"},{"name":"progressive myoclonic epilepsy type 3","type":"exact"},{"name":"progressive myoclonus epilepsy type 3","type":"exact"}],"termid":"MONDO:0012721","xrefs":{"Monarch":{"xref_id":"0012721"}}}


id: PBO:0050476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A4","termid":"PBO:0050476"}


id: PBO:0069693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 972, pseudogene","termid":"PBO:0069693"}


id: SO:0001569
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant causing a new (functional) splice site.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_splice_site_variant","synonyms":[{"name":"cryptic splice site activation","type":"exact"}],"termid":"SO:0001569"}


id: PBO:0039719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 3A pseudogene 1","termid":"PBO:0039719"}


id: MONDO:0006701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm of the anterior pituitary gland in which the neoplastic cells do not stain with acidic or basic dyes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary gland adenoma","termid":"MONDO:0006373"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromophobe adenoma","secondary_identifiers":["MEDGEN:1747","EFO:1000867","DOID:3828","ICDO:8270/0","MESH:D000238","NCIT:C2857","UMLS:C0001432"],"synonyms":[{"name":"chromophobe adenoma of pituitary gland","type":"exact"},{"name":"chromophobe adenoma of the pituitary gland","type":"exact"},{"name":"pituitary chromophobe adenoma","type":"exact"},{"name":"pituitary gland chromophobe adenoma","type":"exact"}],"termid":"MONDO:0006701","xrefs":{"Monarch":{"xref_id":"0006701"}}}


id: PBO:0113549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zpr1p co-chaperone; recognizes eEF1A in GTP-bound, pre-hydrolysis conformation, dampens folding complex GTPase activity to drive client release from Zpr1p","termid":"PBO:0113549"}


id: PATO:0001852
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being out of its usual or proper place, or position.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"displaced","termid":"PATO:0002181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dislocated","secondary_identifiers":["PATO:0001479","PATO:0002159","PATO:0002158"],"synonyms":[{"name":"dislocation","type":"exact"},{"name":"luxated","type":"exact"},{"name":"luxation","type":"exact"},{"name":"relational dislocated quality","type":"exact"}],"termid":"PATO:0001852"}


id: GO:0007570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete age dependent accumulation of genetic damage (obsolete GO:0007570)","synonyms":[{"name":"age dependent accumulation of genetic damage","type":"exact"}],"termid":"GO:0007570"}


id: GO:0034044
data:
  {"annotated_genes":["SJAG_00916","SJAG_02240"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72311,77639],"is_not":false,"summary":null,"term":"GO:0034044"}]},"cv_name":"cellular_component","definition":"A protein complex that forms a coat structure on vesicles involved in exocytosis of proteins from the trans-Golgi network to the cell surface; in Saccharomyces, the complex contains Chs5p, Chs6p, and Chs6p paralogues.","definition_xrefs":["PMID:17000877","PMID:16498409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"},{"relation_name":"part_of","term_name":"trans-Golgi network transport vesicle","termid":"GO:0030140"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00916":null,"SJAG_02240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005794","GO:0032991","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"exomer complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0034044","terms_by_termid":{"GO:0034044":null}}


id: FYPO:0005551
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cleavage furrow is decreased.","definition_xrefs":["PomBase:mah","PMID:27082518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cleavage furrow","synonyms":[{"name":"decreased protein localisation to cleavage furrow","type":"exact"},{"name":"decreased protein localization to cleavage furrow during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cleavage furrow during vegetative growth","type":"exact"},{"name":"reduced protein localization to cleavage furrow","type":"exact"}],"termid":"FYPO:0005551"}


id: PBO:0046857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas associated factor 1","termid":"PBO:0046857"}


id: PBO:0090804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 (UBR family) Ubr11","termid":"PBO:0090804"}


id: PBO:0028596
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_UDP-N-acetylglucosamine-dolichyl-phosphate_N-acetylglucosaminephosphotransferase_activity","termid":"PBO:0028596"}


id: PBO:0064031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 65","termid":"PBO:0064031"}


id: PBO:0044252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWC27 spliceosome associated cyclophilin","termid":"PBO:0044252"}


id: PBO:0065856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB13, member RAS oncogene family","termid":"PBO:0065856"}


id: GO:0070771
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to the cell surface antigen CD47 and the kinase c-Src.","definition_xrefs":["PMID:9169439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-CD47-Src complex","synonyms":[{"name":"ITGA2b-ITGB3-CD47-SRC complex","type":"narrow"}],"termid":"GO:0070771"}


id: MONDO:0021583
data:
  {"annotated_genes":["SJAG_03453","SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[87124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044792"},{"annotations":[86216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[85798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[85375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008093"}]},"cv_name":"mondo","definition":"A melanocytic neoplasm that involves the zone of skin.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"melanocytic neoplasm","termid":"MONDO:0021143"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02855":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"melanocytic skin neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C7161","UMLS:C0349501","MEDGEN:138096"],"synonyms":[{"name":"cutaneous melanocytic neoplasm","type":"exact"},{"name":"melanocytic neoplasm of skin","type":"exact"},{"name":"melanocytic neoplasm of zone of skin","type":"exact"},{"name":"melanocytic skin neoplasm","type":"exact"},{"name":"zone of skin melanocytic neoplasm","type":"exact"}],"termid":"MONDO:0021583","terms_by_termid":{"MONDO:0008093":null,"MONDO:0008097":null,"MONDO:0009578":null,"MONDO:0010621":null,"MONDO:0044792":null},"xrefs":{"Monarch":{"xref_id":"0021583"}}}


id: GO:0006668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sphinganine-1-phosphate, the phosphorylated derivative of D-erythro-2-amino-1,3-octadecanediol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphinganine-1-phosphate metabolic process","synonyms":[{"name":"dihydrosphingosine-1-phosphate metabolic process","type":"exact"},{"name":"dihydrosphingosine-1-phosphate metabolism","type":"exact"},{"name":"sphinganine-1-phosphate metabolism","type":"exact"}],"termid":"GO:0006668"}


id: PATO:0000841
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000841 relative auditory acuity value (obsolete PATO:0000841)","termid":"PATO:0000841"}


id: GO:0102536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2S)-sakuranetin + O2 + reduced [NADPH--hemoprotein reductase] = (2S)-7-methylcarthamidin + H(+) + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:73431","PMID:23184958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sakuranetin 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14754"],"termid":"GO:0102536"}


id: PBO:0001677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate dehydrogenase (lipoamide) kinase Pkp1 (predicted)","termid":"PBO:0001677"}


id: GO:1900109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K9 dimethylation.","definition_xrefs":["GOC:TermGenie","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K9 dimethylation (obsolete GO:1900109)","synonyms":[{"name":"regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"regulation of histone lysine H3 K9 dimethylation","type":"exact"}],"termid":"GO:1900109"}


id: PBO:0003992
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.11","termid":"PBO:0003992"}


id: GO:2001223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuron migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of neuron migration","termid":"GO:2001222"},{"relation_name":"negatively_regulates","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron migration","synonyms":[{"name":"negative regulation of neuron chemotaxis","type":"exact"},{"name":"negative regulation of neuron guidance","type":"related"},{"name":"negative regulation of neuronal migration","type":"exact"}],"termid":"GO:2001223"}


id: PBO:0108981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated microtubule inner protein 5","termid":"PBO:0108981"}


id: MONDO:0004721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete liver neoplasm (obsolete MONDO:0004721)","termid":"MONDO:0004721","xrefs":{"Monarch":{"xref_id":"0004721"}}}


id: PBO:0065951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD17 pseudogene 2","termid":"PBO:0065951"}


id: GO:0003968
data:
  {"annotated_genes":["SJAG_03356"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72306],"is_not":false,"summary":null,"term":"GO:0003968"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1); uses an RNA template, i.e. the catalysis of RNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time.","definition_xrefs":["GOC:pf","EC:2.7.7.48","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5'-3' RNA polymerase activity","termid":"GO:0034062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03356":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016740","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"RNA-directed RNA polymerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9834719","Reactome:R-HSA-9694277","Reactome:R-HSA-9681840","Reactome:R-HSA-192624","Reactome:R-HSA-168280","Reactome:R-HSA-168301","Reactome:R-HSA-9682563","Reactome:R-HSA-9694506","Reactome:R-HSA-9685639","Reactome:R-HSA-9694605","Reactome:R-HSA-9682465","Reactome:R-HSA-9681651","Reactome:R-HSA-9681674","MetaCyc:RNA-DIRECTED-RNA-POLYMERASE-RXN","Reactome:R-HSA-9685681","Reactome:R-HSA-192916","Reactome:R-HSA-9834736","Reactome:R-HSA-9694792","Reactome:R-HSA-9694581","Reactome:R-HSA-192832","Reactome:R-HSA-9694549","Reactome:R-HSA-9828639","Reactome:R-HSA-9837511","Reactome:R-HSA-192851","Reactome:R-HSA-9694344"],"synonyms":[{"name":"RNA nucleotidyltransferase (RNA-directed) activity","type":"exact"},{"name":"RNA replicase activity","type":"related"},{"name":"RNA synthetase activity","type":"related"},{"name":"RNA-dependent RNA polymerase activity","type":"exact"},{"name":"RNA-dependent RNA replicase activity","type":"exact"},{"name":"RNA-directed 5'-3' RNA polymerase activity","type":"exact"},{"name":"RdRP activity","type":"exact"},{"name":"transcriptase","type":"broad"}],"termid":"GO:0003968","terms_by_termid":{"GO:0003968":null}}


id: GO:0070550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the chromatin structure of the rDNA repeats is compacted. In S. cerevisiae, condensation and resolution of the rDNA occurs during anaphase.","definition_xrefs":["PMID:10811823","PMID:15137940","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome condensation","termid":"GO:0030261"},{"relation_name":"part_of","term_name":"nucleolar chromatin organization","termid":"GO:1990700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"rDNA chromatin condensation","synonyms":[{"name":"rDNA condensation","type":"exact"},{"name":"rDNA packaging","type":"exact"}],"termid":"GO:0070550"}


id: MONDO:8000012
data:
  {"annotated_genes":["SJAG_05008"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85761],"is_not":false,"summary":null,"term":"MONDO:8000012"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pancreas disorder","termid":"MONDO:0002356"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"obsolete autosomal recessive hereditary demyelinating motor and sensory neuropathy (obsolete MONDO:0015361)","termid":"MONDO:0015361"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic hypothyroidism (obsolete MONDO:0015778)","termid":"MONDO:0015778"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic hearing loss (obsolete MONDO:0019589)","termid":"MONDO:0019589"},{"relation_name":"is_a","term_name":"neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset","termid":"MONDO:0024189"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05008":null},"genotype_count":0,"is_obsolete":false,"name":"neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616263","GARD:17791","Orphanet:456312","UMLS:C4015728","MEDGEN:864165"],"synonyms":[{"name":"IMNEPD","type":"exact"},{"name":"infantile-onset multisystem neurologic, endocrine, and pancreatic disease","type":"exact"},{"name":"neurologic, endocrine, and pancreatic disease, multisystem, infantile-onset","type":"broad"}],"termid":"MONDO:8000012","terms_by_termid":{"MONDO:8000012":null},"xrefs":{"Monarch":{"xref_id":"8000012"}}}


id: MONDO:1012459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiosarcoma, non-human animal","termid":"MONDO:1011823"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiosarcoma, African hunting dog","secondary_identifiers":["OMIA:001813-9622"],"termid":"MONDO:1012459","xrefs":{"Monarch":{"xref_id":"1012459"}}}


id: MONDO:0007205
data:
  {"annotated_genes":["SJAG_03881"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87121],"is_not":false,"summary":null,"term":"MONDO:0007205"}]},"cv_name":"mondo","definition":"Diaphyseal medullary stenosis with malignant fibrous histiocytoma is a very rare autosomal dominant bone dysplasia/cancer syndrome characterized clinically by bone infarctions, cortical growth abnormalities, pathological fractures, and development of bone sarcoma (malignant fibrous histiocytoma).","definition_xrefs":["Orphanet:85182"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"disorder of polyamine metabolism","termid":"MONDO:0800159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"diaphyseal medullary stenosis-bone malignancy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C122660","OMIM:112250","MEDGEN:350613","UMLS:C1862177","DOID:0080664","GARD:10072"],"synonyms":[{"name":"BDMF","type":"related"},{"name":"DMS-MFH","type":"exact"},{"name":"DMSMFH","type":"related"},{"name":"Hardcastle syndrome","type":"exact"},{"name":"Hardcastle's syndrome","type":"exact"},{"name":"bone dysplasia with malignant fibrous histiocytoma","type":"related"},{"name":"bone dysplasia with medullary fibrosarcoma","type":"related"},{"name":"bone dysplasia-medullary fibrosarcoma syndrome","type":"exact"},{"name":"diaphyseal medullary stenosis with malignant fibrous histiocytoma","type":"related"},{"name":"diaphyseal medullary stenosis-bone malignancy syndrome","type":"exact"},{"name":"diaphyseal medullary stenosis-malignant fibrous histiocytoma syndrome","type":"exact"},{"name":"myopathy, limb-girdle, with bone fragility","type":"related"}],"termid":"MONDO:0007205","terms_by_termid":{"MONDO:0007205":null},"xrefs":{"Monarch":{"xref_id":"0007205"}}}


id: GO:0030782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (S)-7,8,13,14-tetrahydroprotoberberine = S-adenosyl-L-homocysteine + cis-N-methyl-(S)-7,8,13,14-tetrahydroprotoberberine.","definition_xrefs":["EC:2.1.1.122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"(S)-tetrahydroprotoberberine N-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.122-RXN","RHEA:12805"],"synonyms":[{"name":"S-adenosyl-L-methionine:(S)-7,8,13,14-tetrahydroprotoberberine cis-N-methyltransferase activity","type":"related"},{"name":"tetrahydroprotoberberine cis-N-methyltransferase activity","type":"related"}],"termid":"GO:0030782"}


id: GO:0050456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-cysteine + NAD+ = L-cystine + H+ + NADH.","definition_xrefs":["EC:1.8.1.6","RHEA:20597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor","termid":"GO:0016668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-cystine reductase (NADH) activity","secondary_identifiers":["KEGG_REACTION:R00892","MetaCyc:CYSTINE-REDUCTASE-NADH-RXN"],"synonyms":[{"name":"L-cysteine:NAD+ oxidoreductase","type":"related"},{"name":"NADH-dependent cystine reductase activity","type":"related"},{"name":"NADH2:L-cystine oxidoreductase","type":"related"},{"name":"NADH:L-cystine oxidoreductase activity","type":"related"},{"name":"cystine reductase (NADH) activity","type":"related"},{"name":"cystine reductase (NADH2)","type":"related"},{"name":"cystine reductase activity","type":"exact"}],"termid":"GO:0050456"}


id: MONDO:0012631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An Alzheimer's disease that is characterized by an associated with variation in the region 1q25.","definition_xrefs":["PMID:17564960","DOID:0110047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset autosomal dominant Alzheimer disease","termid":"MONDO:0015140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"Alzheimer disease 14","secondary_identifiers":["MEDGEN:369666","MESH:C566999","OMIM:611154","UMLS:C1970144","GARD:16518"],"synonyms":[{"name":"AD14","type":"exact"},{"name":"Alzheimer disease 14","type":"exact"},{"name":"Alzheimer disease-14","type":"exact"},{"name":"Alzheimer's disease 14","type":"exact"},{"name":"Alzheimer's disease type 14","type":"exact"}],"termid":"MONDO:0012631","xrefs":{"Monarch":{"xref_id":"0012631"}}}


id: GO:1900058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sulfate assimilation.","definition_xrefs":["PMID:7601277","GOC:TermGenie","PMID:7891681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"sulfate assimilation","termid":"GO:0000103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"regulation of sulfate assimilation","synonyms":[{"name":"regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor","type":"narrow"},{"name":"regulation of sulphate assimilation","type":"exact"},{"name":"regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor","type":"narrow"}],"termid":"GO:1900058"}


id: MONDO:1011588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Porphyria that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyria, non-human animal","termid":"MONDO:1011418"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porphyria, pig","secondary_identifiers":["OMIA:000815-9823"],"termid":"MONDO:1011588","xrefs":{"Monarch":{"xref_id":"1011588"}}}


id: PBO:0003830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ksp1 (predicted)","termid":"PBO:0003830"}


id: PBO:0079941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"usherin","termid":"PBO:0079941"}


id: MONDO:0008076
data:
  {"annotated_genes":["SJAG_00663"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86492],"is_not":false,"summary":null,"term":"MONDO:0008076"}]},"cv_name":"mondo","definition":"An autosomal dominant form of recurrent focal neuropathy characterized clinically by acute, recurrent episodes of brachial plexus neuropathy with muscle weakness and atrophy preceded by severe pain in the affected arm.","definition_xrefs":["OMIM:162100"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neuralgic amyotrophy","termid":"MONDO:0017362"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00663":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"amyotrophic neuralgia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:3955","SCTID:26609002","UMLS:C1834304","MESH:D020968","ICD9:353.5","DOID:10383","MEDGEN:320318"],"synonyms":[{"name":"HNA","type":"related"},{"name":"amyotrophy, hereditary neuralgic","type":"exact"},{"name":"amyotrophy, hereditary neuralgic, with predilection for brachial plexus","type":"exact"},{"name":"brachial plexus neuropathy, hereditary","type":"exact"},{"name":"hereditary brachial plexus neuropathy","type":"exact"},{"name":"hereditary neuralgic amyotrophy","type":"exact"},{"name":"neuralgic amyotrophy","type":"related"},{"name":"neuritis with brachial predilection","type":"exact"}],"termid":"MONDO:0008076","terms_by_termid":{"MONDO:0008076":null},"xrefs":{"Monarch":{"xref_id":"0008076"}}}


id: GO:0035929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of any steroid that acts as a hormone into the circulatory system.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"steroid hormone secretion","termid":"GO:0035929"}


id: PBO:0050458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOMER3 antisense RNA 1","termid":"PBO:0050458"}


id: PR:000027602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3, initiator methionine removed phosphorylated form that has been phosphorylated by Haspin Schizosaccharomyces pombe. Example: UniProtKB:P10651-1, 2-136, Thr-4, MOD:00047.","definition_xrefs":["PomBase:MAH","PMID:20929775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Phos(T3)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"H3-pT3","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/Phos:1","type":"exact"},{"name":"hht3/InitMet-/Phos:(T4)","type":"exact"},{"name":"hht3/Phos(T3)","type":"exact"}],"termid":"PR:000027602"}


id: GO:0010278
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein transport machinery of the chloroplast outer membrane that contains at least three components Toc159, Toc75 and Toc34, interacts with precursor proteins which are imported into the chloroplast in a GTP dependant manner.","definition_xrefs":["PMID:11299338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"chloroplast outer membrane","termid":"GO:0009707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast outer membrane translocon","termid":"GO:0010278"}


id: PBO:0075125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaphilin","termid":"PBO:0075125"}


id: PBO:0084125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexameric DNA polymerase alpha-associated DNA helicase A; involved in lagging strand DNA synthesis; contains single-stranded DNA stimulated ATPase and dATPase activities; replication protein A stimulates helicase and ATPase activities","termid":"PBO:0084125"}


id: PBO:0061719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT family member 2D","termid":"PBO:0061719"}


id: PBO:0086187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein serine/threonine phosphatase; regulates Hsp90 chaperone by affecting its ATPase and cochaperone binding activities; has similarity to human phosphatase PP5; present in both the nucleus and cytoplasm; expressed during logarithmic growth","termid":"PBO:0086187"}


id: PBO:0024817
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CHS1, CHS2, CHS3 triple mutant","termid":"PBO:0024817"}


id: GO:0014029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the specialized region of ectoderm between the neural ectoderm (neural plate) and non-neural ectoderm. The neural crest gives rise to the neural crest cells that migrate away from this region as neural tube formation proceeds.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest formation","termid":"GO:0014029"}


id: GO:0002347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a tumor cell.","definition_xrefs":["PMID:16730260","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tumor cell","termid":"GO:0002347"}


id: MONDO:0859143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome that is caused by a variation in the SPEN gene and is characterized by developmental delay/intellectual disability, autism spectrum disorder, anxiety, aggressive behavior, attention deficit disorder, hypotonia, brain and spine anomalies, congenital heart defects, high/narrow palate, facial dysmorphisms, and obesity/increased BMI, especially in females.","definition_xrefs":["PMID:33596411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Radio-Tartaglia syndrome","secondary_identifiers":["OMIM:619312","Orphanet:662234","UMLS:C5543339","MEDGEN:1778557"],"synonyms":[{"name":"SPEN-related neurodevelopmental disorder","type":"exact"}],"termid":"MONDO:0859143","xrefs":{"Monarch":{"xref_id":"0859143"}}}


id: FYECO:0000409
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 2,2'-dipyridyl was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 2,2'-dipyridyl","synonyms":[{"name":"2,2'-dipyridyl added","type":"exact"}],"termid":"FYECO:0000409"}


id: MONDO:0018332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple acyl-CoA dehydrogenase deficiency","termid":"MONDO:0009282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005267","MONDO:0002525","MONDO:0004069"],"is_obsolete":false,"name":"multiple acyl-CoA dehydrogenase deficiency, severe neonatal type","secondary_identifiers":["MEDGEN:1842925","Orphanet:394529","UMLS:C5680029","GARD:17626"],"synonyms":[{"name":"MAD deficiency, severe neonatal type","type":"exact"},{"name":"MADD, severe neonatal type","type":"exact"},{"name":"glutaric aciduria type 2, severe neonatal type","type":"exact"}],"termid":"MONDO:0018332","xrefs":{"Monarch":{"xref_id":"0018332"}}}


id: MONDO:0016863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Duane-radial ray syndrome","termid":"MONDO:0011812"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 20","termid":"MONDO:0016918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"Okihiro syndrome due to 20q13 microdeletion","secondary_identifiers":["UMLS:C5679682","MEDGEN:1826026","Orphanet:261638","GARD:20787"],"synonyms":[{"name":"Duane-radial ray syndrome due to monosomy 20q13","type":"exact"},{"name":"Okihiro syndrome due to del(20)(q13)","type":"exact"},{"name":"Okihiro syndrome due to monosomy 20q13","type":"exact"}],"termid":"MONDO:0016863","xrefs":{"Monarch":{"xref_id":"0016863"}}}


id: MONDO:0971150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal recessive 11, with spasticity","secondary_identifiers":["OMIM:620854","MEDGEN:1856205","UMLS:C5935630"],"termid":"MONDO:0971150","xrefs":{"Monarch":{"xref_id":"0971150"}}}


id: GO:0046928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of a neurotransmitter from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"is_a","term_name":"regulation of neurotransmitter transport","termid":"GO:0051588"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of neurotransmitter secretion","termid":"GO:0046928"}


id: MOD:00913
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-methionine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-methionine residue","synonyms":[{"name":"ModMet","type":"exact"}],"termid":"MOD:00913"}


id: GO:0150142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of CD86 biosynthetic process.","definition_xrefs":["GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of CD86 production (obsolete GO:0150142)","synonyms":[{"name":"positive regulation of CD86 biosynthetic process","type":"exact"}],"termid":"GO:0150142"}


id: PATO:0000797
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000797 urination value (obsolete PATO:0000797)","termid":"PATO:0000797"}


id: GO:0001972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to retinoic acid, 3,7-dimethyl-9-(2,6,-trimethyl-1-cyclohexen-1-yl)-2,4,6,8-nonatetraenoic acid.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid binding","termid":"GO:0005501"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"retinoic acid binding","termid":"GO:0001972"}


id: PBO:0090093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-bisphosphate 2-phosphatase","termid":"PBO:0090093"}


id: GO:0043497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein heterodimerization, interacting selectively with a nonidentical protein to form a heterodimer.","definition_xrefs":["GOC:jl","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein heterodimerization activity (obsolete GO:0043497)","termid":"GO:0043497"}


id: MONDO:0957048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"macular degeneration","termid":"MONDO:0003004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated macular dystrophy","secondary_identifiers":["UMLS:C5681367","GARD:22097","MEDGEN:1842262","Orphanet:519302"],"termid":"MONDO:0957048","xrefs":{"Monarch":{"xref_id":"0957048"}}}


id: GO:0141094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA loop anchor, a region of chromosome that defines the ends of a DNA loop where two parts of same DNA strand are held in close physical proximity. For example, in animals, the anchors of DNA loops are convergently oriented CTCF binding sites during interphase.","definition_xrefs":["PMID:25497547","PMID:26499245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific DNA binding","termid":"GO:0043565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"DNA loop anchor binding","termid":"GO:0141094"}


id: PBO:0025515
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holocarboxylase synthetase deficiency","termid":"PBO:0025515"}


id: RO:0002158
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"two individual entities d1 and d2 stand in a shares_ancestor_with relation if and only if there exists some a such that d1 derived_by_descent_from a and d2 derived_by_descent_from a.","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shares_ancestor_with","termid":"RO:0002158"}


id: PBO:0003583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-O (predicted)","termid":"PBO:0003583"}


id: GO:0019880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete bacteriocin susceptibility/resistance (obsolete GO:0019880)","synonyms":[{"name":"bacteriocin susceptibility/resistance","type":"exact"}],"termid":"GO:0019880"}


id: PR:Q9UT29
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC8F11.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8F11.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.08c","synonyms":[{"name":"Spom972h-SPAC8F11.08c","type":"exact"}],"termid":"PR:Q9UT29"}


id: PBO:0016976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug108","termid":"PBO:0016976"}


id: PBO:0044239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 9","termid":"PBO:0044239"}


id: PBO:0090635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cardiolipin-specific phospholipase Cld1","termid":"PBO:0090635"}


id: GO:0075254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of uredospore formation, a process in which an asexual, dikaryotic, often rusty-colored spore, is formed in a structure called a uredinium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043944"},{"relation_name":"is_a","term_name":"regulation of uredospore formation","termid":"GO:0075252"},{"relation_name":"negatively_regulates","term_name":"uredospore formation","termid":"GO:0075251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of uredospore formation","synonyms":[{"name":"negative regulation of ureidospore formation","type":"exact"}],"termid":"GO:0075254"}


id: GO:0050971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in magnetoception in which a mechanical stimulus is received and converted into a molecular signal. The stimulus is in the form of torque on particles such as magnetite which respond to a magnetic field.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"magnetoreception by sensory perception of mechanical stimulus","termid":"GO:0050979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in magnetoreception","synonyms":[{"name":"magnetoception, sensory transduction of mechanical stimulus","type":"exact"},{"name":"magnetoreception, detection of mechanical stimulus","type":"exact"},{"name":"magnetoreception, sensory detection of mechanical stimulus","type":"exact"},{"name":"magnetoreception, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during magnetoreception","type":"exact"},{"name":"sensory transduction of mechanical stimulus during magnetoreception","type":"exact"}],"termid":"GO:0050971"}


id: PBO:0088740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exomer complex ChAPs family (Chs5p-Arf1p-binding) protein Bch1","termid":"PBO:0088740"}


id: GO:0008908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + isochorismate = 2,3-dihydroxy-2,3-dihydrobenzoate + pyruvate.","definition_xrefs":["RHEA:11112","EC:3.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene-A4 hydrolase activity","termid":"GO:0004463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"isochorismatase activity","secondary_identifiers":["KEGG_REACTION:R03037","MetaCyc:ISOCHORMAT-RXN"],"synonyms":[{"name":"2,3 dihydro-2,3 dihydroxybenzoate synthase activity","type":"related"},{"name":"2,3-dihydro-2,3-dihydroxybenzoate synthase activity","type":"related"},{"name":"2,3-dihydroxy-2,3-dihydrobenzoate synthase activity","type":"related"},{"name":"2,3-dihydroxy-2,3-dihydrobenzoic synthase activity","type":"related"},{"name":"isochorismate pyruvate-hydrolase activity","type":"related"}],"termid":"GO:0008908"}


id: PBO:0066875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 175","termid":"PBO:0066875"}


id: PBO:0072871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SATB1 antisense RNA 1","termid":"PBO:0072871"}


id: PBO:0001837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human FAM32A homolog","termid":"PBO:0001837"}


id: GO:0034548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-cyclopropylammeline + H2O = N-cyclopropylammelide + NH3.","definition_xrefs":["UM-BBD_reactionID:r0826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-cyclopropylammeline deaminase activity","secondary_identifiers":["MetaCyc:RXN-8019"],"termid":"GO:0034548"}


id: PATO:0000759
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's exhibiting paralytic behaviour when subjected to mechanical shock.","definition_xrefs":["PATOC:flybase"],"direct_ancestors":[{"relation_name":"has_part","term_name":"paralysed","termid":"PATO:0000763"},{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bang sensitive","termid":"PATO:0000759"}


id: GO:0002525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An acute inflammatory response to non-antigenic stimuli such as heat or physical trauma.","definition_xrefs":["PMID:9073326","GOC:jal","PMID:16459497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acute inflammatory response to non-antigenic stimulus","termid":"GO:0002525"}


id: FYPO:0000324
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119792,119793,119794],"is_not":false,"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the onset of anaphase of the mitotic cell cycle begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased duration of mitotic M phase","termid":"FYPO:0000274"},{"relation_name":"is_a","term_name":"delayed cell cycle phase transition","termid":"FYPO:0000409"},{"relation_name":"is_a","term_name":"abnormal mitotic metaphase/anaphase transition","termid":"FYPO:0006477"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"mitotic metaphase/anaphase transition delay","references_by_uniquename":{"PMID:23786411":null},"secondary_identifiers":["FYPO:0000393","FYPO:0004309"],"single_locus_annotated_genes":["SJAG_01956","SJAG_03575","SJAG_03351"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle passage through the metaphase-anaphase transition: delayed","type":"related"},{"name":"delayed cell cycle passage through mitotic metaphase-anaphase transition","type":"exact"},{"name":"delayed mitotic anaphase B","type":"narrow"},{"name":"delayed mitotic metaphase/anaphase transition","type":"exact"},{"name":"delayed onset of anaphase B during mitotic cell cycle","type":"narrow"},{"name":"delayed onset of mitotic anaphase","type":"exact"},{"name":"delayed onset of mitotic anaphase B","type":"narrow"},{"name":"delayed onset of mitotic anaphase B during vegetative growth","type":"narrow"},{"name":"increased duration of metaphase during mitosis","type":"related"},{"name":"increased duration of mitotic metaphase","type":"related"},{"name":"metaphase/anaphase transition delay during mitotic cell cycle","type":"exact"},{"name":"mitotic anaphase delay","type":"exact"},{"name":"mitotic cell cycle delay at metaphase/anaphase transition","type":"exact"},{"name":"mitotic metaphase/anaphase transition delay during vegetative growth","type":"exact"},{"name":"transient cell cycle arrest in mitotic metaphase","type":"exact"}],"termid":"FYPO:0000324","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000324":null}}


id: GO:0043392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the frequency, rate or extent of DNA binding. DNA binding is any process in which a gene product interacts selectively with DNA (deoxyribonucleic acid).","definition_xrefs":["GOC:jl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of binding","termid":"GO:0051100"},{"relation_name":"is_a","term_name":"regulation of DNA binding","termid":"GO:0051101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA binding","synonyms":[{"name":"down regulation of DNA binding","type":"exact"},{"name":"down-regulation of DNA binding","type":"exact"},{"name":"downregulation of DNA binding","type":"exact"},{"name":"inhibition of DNA binding","type":"narrow"}],"termid":"GO:0043392"}


id: PBO:0047723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMR1 antisense RNA 1","termid":"PBO:0047723"}


id: PBO:0117053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO7B antisense RNA 1","termid":"PBO:0117053"}


id: PBO:0059298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L47","termid":"PBO:0059298"}


id: GO:0033805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: S-adenosyl-L-methionine + sarcosine = S-adenosyl-L-homocysteine + N,N-dimethylglycine, and S-adenosyl-L-methionine + N,N-dimethylglycine = S-adenosyl-L-homocysteine + betaine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sarcosine/dimethylglycine N-methyltransferase activity (obsolete GO:0033805)","synonyms":[{"name":"ApDMT","type":"related"},{"name":"S-adenosyl-L-methionine:N,N-dimethylglycine N-methyltransferase activity","type":"narrow"},{"name":"SDMT","type":"related"},{"name":"sarcosine dimethylglycine N-methyltransferase activity","type":"narrow"},{"name":"sarcosine dimethylglycine methyltransferase activity","type":"narrow"},{"name":"sarcosine/dimethylglycine N-methyltransferase activity","type":"exact"}],"termid":"GO:0033805"}


id: PBO:0017494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght3","termid":"PBO:0017494"}


id: MOD:01987
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-serine residue by a thioether bond to form 2-(S-L-cysteinyl)-D-serine.","definition_xrefs":["PubMed:21786372","RESID:AA0624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked D-serine residue","termid":"MOD:02064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(L-cystein-S-yl)-D-serine","synonyms":[{"name":"(2R,5S)-2,5-diamino-5-carboxy-6-hydroxy-4-thiahexanoic acid","type":"exact"},{"name":"(2S)-2-amino-2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-3-hydroxypropanoic acid","type":"exact"}],"termid":"MOD:01987"}


id: PBO:0074463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 5 (pseudogene)","termid":"PBO:0074463"}


id: GO:0035010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Events resulting in the formation of a multilayered cellular sheath surrounding an invader and thus preventing its development. This defense mechanism is often seen in insects in response to nematodes or parasitoids, which are too large to be phagocytosed by individual hemocytes. In some organisms the capsule is blackened due to melanization.","definition_xrefs":["PMID:12225920","GO_REF:0000022","GOC:bf","PMID:11846478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"encapsulation of foreign target","termid":"GO:0035010"}


id: GO:1990630
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of IRE1 (Inositol-requiring enzyme-1), RACK1 (Receptor of activated protein kinase C 1, GNB2L1) and PP2A (protein phosphatase 2A). RACK1 acts as an adaptor to bridge an interaction between IRE1 and PP2A.","definition_xrefs":["GOC:PARL","PMID:20103773","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"IRE1-RACK1-PP2A complex","synonyms":[{"name":"ERN1-RACK1-PP2A complex","type":"related"},{"name":"IRE1alpha-RACK1-PP2A complex","type":"narrow"}],"termid":"GO:1990630"}


id: PBO:0055412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2842","termid":"PBO:0055412"}


id: PR:Q09923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized oxidoreductase YdjG that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01759","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase yakc [NADP(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.12","secondary_identifiers":["UniProtKB:Q09923"],"synonyms":[{"name":"Spom972h-ydjG","type":"exact"}],"termid":"PR:Q09923"}


id: PBO:0070550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 16","termid":"PBO:0070550"}


id: GO:2000470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peroxidase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peroxidase activity","synonyms":[{"name":"positive regulation of donor:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"positive regulation of oxyperoxidase activity","type":"exact"},{"name":"positive regulation of peroxidase reaction","type":"exact"}],"termid":"GO:2000470"}


id: MONDO:0700052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abscess contained between the internal and external anal sphincters.","direct_ancestors":[{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intersphincteric abscess","secondary_identifiers":["MEDGEN:574358","UMLS:C0341384","SCTID:235795007"],"termid":"MONDO:0700052","xrefs":{"Monarch":{"xref_id":"0700052"}}}


id: PBO:0031113
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_G1/S_phase_transcription","termid":"PBO:0031113"}


id: MONDO:0002335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chronic inflammatory demyelinating polyneuritis (obsolete MONDO:0002335)","secondary_identifiers":["NANDO:1200030","NANDO:2200905","NANDO:2100251"],"termid":"MONDO:0002335","xrefs":{"Monarch":{"xref_id":"0002335"}}}


id: PBO:0109408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bin3 family, RNA methyltransferase Bmc1","termid":"PBO:0109408"}


id: GO:1901043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein polyubiquitination that is involved in cellular response to misfolded protein.","definition_xrefs":["GOC:al","GOC:TermGenie","PMID:21324894"],"gene_count":0,"genotype_count":0,"name":"obsolete protein polyubiquitination involved in cellular response to misfolded protein (obsolete GO:1901043)","synonyms":[{"name":"polyubiquitin of cellular response to misfolded protein","type":"related"},{"name":"protein polyubiquitination involved in cellular response to misfolded protein","type":"exact"},{"name":"protein polyubiquitination of cellular response to misfolded protein","type":"exact"},{"name":"protein polyubiquitinylation of cellular response to misfolded protein","type":"exact"},{"name":"protein polyubiquitylation of cellular response to misfolded protein","type":"exact"}],"termid":"GO:1901043"}


id: GO:0010067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the primary meristem or meristematic tissue that gives rise to the primary vascular tissue.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary meristem tissue development","termid":"GO:0010065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"procambium histogenesis","termid":"GO:0010067"}


id: GO:0033190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cyclization of double bonds in prosolanapyrone II to form (-)-solanapyrone A.","definition_xrefs":["PMID:9659400","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0009975","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"solanapyrone synthase activity","termid":"GO:0033190"}


id: PBO:0087974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trimethyl guanosine synthase, conserved nucleolar methyl transferase; converts the m(7)G cap structure of snRNAs, snoRNAs, and telomerase TLC1 RNA to m(2,2,7)G; also required for nucleolar assembly and splicing of meiotic pre-mRNAs; interacts with Swm2p, which may confer substrate specificity on Tgs1p","termid":"PBO:0087974"}


id: PBO:0056563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance 10 replication initiation factor","termid":"PBO:0056563"}


id: PBO:0054744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2153","termid":"PBO:0054744"}


id: GO:0072310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glomerular epithelial cell over time, from its formation to the mature structure. Glomerular epithelial cells are specialized epithelial cells that form part of the glomerulus; there are two types, glomerular parietal epithelial cells and glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular epithelial cell development","termid":"GO:0072310"}


id: MOD:00377
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-histidine residue and 5'-phosphouridine through a phosphoramide ester bond to form 1'-(phospho-5'-uridine)-L-histidine.","definition_xrefs":["PubMed:11467524","PubMed:380639","PubMed:321007","PubMed:8794735","RESID:AA0372","Unimod:417#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"uridylated residue","termid":"MOD:01166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-(phospho-5'-uridine)-L-histidine","synonyms":[{"name":"(S)-2-amino-3-[1-(5'-uridine phosphono)imidazol-4-yl]propanoic acid","type":"exact"},{"name":"1'-(phospho-5'-uridine)-L-histidine","type":"exact"},{"name":"ACT_SITE Tele-UMP-histidine intermediate","type":"exact"},{"name":"L-histidine 5'-uridine phosphoramidester","type":"exact"},{"name":"L-histidine monoanhydride with 5'-uridylic acid","type":"exact"},{"name":"MOD_RES O-UMP-histidine","type":"exact"},{"name":"N(tau)-5'-uridylic-L-histidine","type":"exact"},{"name":"N1'-uridylylated histidine","type":"exact"},{"name":"PhosphoUridine","type":"related"},{"name":"tele-5'-uridylic-L-histidine","type":"exact"},{"name":"uridine phosphodiester","type":"related"}],"termid":"MOD:00377"}


id: GO:0097490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single sympathetic neuron projection involved in cellular development. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite.","definition_xrefs":["GOC:rl","PMID:22790009","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection extension","termid":"GO:1990138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sympathetic neuron projection extension","synonyms":[{"name":"sympathetic neurite extension","type":"narrow"},{"name":"sympathetic neuron process extension","type":"exact"},{"name":"sympathetic neuron protrusion extension","type":"exact"},{"name":"sympathetic neuronal cell projection extension","type":"exact"}],"termid":"GO:0097490"}


id: PBO:0085731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the synthesis of GlcNAc-PI; GlcNAc-PI is the first intermediate in the synthesis of glycosylphosphatidylinositol (GPI) anchors; homologous to the human PIG-C protein; GlcNAc-PI stands for N-acetylglucosaminyl phosphatidylinositol","termid":"PBO:0085731"}


id: PBO:0038523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily G member 2 (Junior blood group)","termid":"PBO:0038523"}


id: MONDO:0024541
data:
  {"annotated_genes":["SJAG_03805"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86762],"is_not":false,"summary":null,"term":"MONDO:0024541"}]},"cv_name":"mondo","definition":"Any tricho-hepato-enteric syndrome in which the cause of the disease is a mutation in the TTC37 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichohepatoenteric syndrome","termid":"MONDO:0009105"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"trichohepatoenteric syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1644087","OMIM:222470","DOID:0111415","UMLS:C4551982"],"synonyms":[{"name":"THES1","type":"related"},{"name":"TRICHOHEPATOENTERIC syndrome 1","type":"exact"},{"name":"TTC37 tricho-hepato-enteric syndrome","type":"exact"},{"name":"The syndrome","type":"related"},{"name":"diarrhea, fatal infantile, with trichorrhexis nodosa","type":"related"},{"name":"diarrhea, syndromic","type":"related"},{"name":"tricho-hepato-enteric syndrome caused by mutation in TTC37","type":"exact"},{"name":"trichohepatoenteric syndrome 1","type":"exact"}],"termid":"MONDO:0024541","terms_by_termid":{"MONDO:0024541":null},"xrefs":{"Monarch":{"xref_id":"0024541"}}}


id: MONDO:0004076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign tumor, composed of mature adipocytes, that arises within the tendon sheath.","definition_xrefs":["NCIT:C6499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"},{"relation_name":"is_a","term_name":"benign synovial neoplasm","termid":"MONDO:0024715"},{"relation_name":"is_a","term_name":"tendon sheath disorder","termid":"MONDO:0024876"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tendon sheath lipoma","secondary_identifiers":["DOID:7016","MEDGEN:277806","UMLS:C1336703"],"synonyms":[{"name":"lipoma of tendon sheath","type":"exact"},{"name":"lipoma of the tendon sheath","type":"exact"},{"name":"tendon sheath lipoma","type":"exact"}],"termid":"MONDO:0004076","xrefs":{"Monarch":{"xref_id":"0004076"}}}


id: PBO:0070626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 10","termid":"PBO:0070626"}


id: GO:0030083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A pigment protein complex that forms part of the photosystem I associated light-harvesting complex I; contains two proteins (usually about 24 and 21.5 kDa); has a fluorescence maximum between 680 and 690 nm.","definition_xrefs":["PMID:8825475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PSI associated light-harvesting complex I","termid":"GO:0009518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"PSI associated light-harvesting complex I, LHCIa subcomplex","termid":"GO:0030083"}


id: PBO:0076574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 2","termid":"PBO:0076574"}


id: PBO:0070993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 17","termid":"PBO:0070993"}


id: GO:0033529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of raffinose, the trisaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"raffinose family oligosaccharide biosynthetic process","termid":"GO:0010325"},{"relation_name":"is_a","term_name":"raffinose metabolic process","termid":"GO:0033530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"raffinose biosynthetic process","synonyms":[{"name":"raffinose anabolism","type":"exact"},{"name":"raffinose biosynthesis","type":"exact"},{"name":"raffinose formation","type":"exact"},{"name":"raffinose synthesis","type":"exact"}],"termid":"GO:0033529"}


