# terms

id: MOD:01921
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to D-aspartic acid.","definition_xrefs":["PubMed:9384562","RESID:AA0190#ASP","ChEBI:48094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"D-aspartic acid","termid":"MOD:01942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aspartic acid (Asp)","synonyms":[{"name":"(2R)-2-aminobutanedioic acid","type":"exact"},{"name":"2-azanylbutanedioic acid","type":"exact"},{"name":"D-aspartic acid","type":"exact"},{"name":"aminosuccinic acid","type":"exact"}],"termid":"MOD:01921"}


id: PBO:0051096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 6","termid":"PBO:0051096"}


id: MONDO:0008248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pigmented purpuric eruption","secondary_identifiers":["SCTID:20343006","UMLS:C0406515","MESH:C537186","MEDGEN:96058","OMIM:172900"],"synonyms":[{"name":"Schamberg disease","type":"related"},{"name":"Schamberg purpura","type":"related"},{"name":"familial pigmented purpuric eruption","type":"related"},{"name":"pigmented purpura","type":"related"},{"name":"pigmented purpuric dermatosis","type":"related"},{"name":"pigmented purpuric eruption","type":"exact"},{"name":"progressive pigmented purpura","type":"related"}],"termid":"MONDO:0008248","xrefs":{"Monarch":{"xref_id":"0008248"}}}


id: PBO:0050087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 7","termid":"PBO:0050087"}


id: GO:0032012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ARF protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"ARF protein signal transduction","termid":"GO:0032011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of ARF protein signal transduction","termid":"GO:0032012"}


id: PR:Q9P3U0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3U0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase Ubp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.06","synonyms":[{"name":"SPAC328.06","type":"related"},{"name":"Spom972h-ubp2","type":"exact"},{"name":"deubiquitinating enzyme 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3U0"}


id: FYPO:0005918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype the localization of a protein to heterochromatin in subtelomeric regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin","termid":"FYPO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to subtelomeric heterochromatin","synonyms":[{"name":"decreased protein localisation to subtelomeric heterochromatin","type":"exact"},{"name":"decreased protein localization to heterochromatin at subtelomere","type":"exact"},{"name":"decreased protein localization to telomeric heterochromatin","type":"related"},{"name":"reduced protein localization to subtelomeric heterochromatin","type":"exact"}],"termid":"FYPO:0005918"}


id: GO:0004155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + 5,6,7,8-tetrahydropteridine = NAD(P)H + H+ + 6,7-dihydropteridine.","definition_xrefs":["EC:1.5.1.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"6,7-dihydropteridine reductase activity","secondary_identifiers":["MetaCyc:1.5.1.34-RXN","Reactome:R-HSA-71130"],"synonyms":[{"name":"5,6,7,8-tetrahydropteridine:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"5,6,7,8-tetrahydropteridine:NAD(P)H+ oxidoreductase activity","type":"related"},{"name":"6,7-dihydropteridine:NAD(P)H oxidoreductase activity","type":"related"},{"name":"DHPR activity","type":"related"},{"name":"NAD(P)H(2):6,7-dihydropteridine oxidoreductase activity","type":"related"},{"name":"NAD(P)H2:6,7-dihydropteridine oxidoreductase activity","type":"related"},{"name":"NADH-dihydropteridine reductase activity","type":"related"},{"name":"NADPH-dihydropteridine reductase activity","type":"related"},{"name":"NADPH-specific dihydropteridine reductase activity","type":"related"},{"name":"dihydropteridine (reduced nicotinamide adenine dinucleotide) reductase activity","type":"related"},{"name":"dihydropteridine reductase (NADH) activity","type":"related"},{"name":"dihydropteridine reductase activity","type":"exact"},{"name":"dihydropteridine reduction","type":"related"}],"termid":"GO:0004155"}


id: MONDO:0006561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Under-production of pigment in the eyelid.","definition_xrefs":["EFO:1000713"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eyelid degenerative disorder","termid":"MONDO:0000941"},{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"eyelid hypopigmentation","secondary_identifiers":["SCTID:68210006","DOID:11668","MEDGEN:509852","ICD9:374.53","UMLS:C0155212"],"synonyms":[{"name":"hypopigmentation of eyelid","type":"exact"}],"termid":"MONDO:0006561","xrefs":{"Monarch":{"xref_id":"0006561"}}}


id: PBO:0013080
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisF","termid":"PBO:0013080"}


id: MONDO:0035450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aprosencephaly","secondary_identifiers":["UMLS:C0431349","NCIT:C98824","Orphanet:566857","icd11.foundation:1740361952","MEDGEN:140908","GARD:22281"],"termid":"MONDO:0035450","xrefs":{"Monarch":{"xref_id":"0035450"}}}


id: GO:0010291
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-beta-carotene + 4 H+ + 2 O2 + 4 reduced [2Fe-2S]-[ferredoxin] = all-trans-zeaxanthin + 2 H2O + 4 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["PMID:16492736","RHEA:30331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"beta-carotene 3-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN1F-152","EC:1.14.15.24","GO:0042411"],"synonyms":[{"name":"beta-carotene hydroxylase activity","type":"narrow"},{"name":"carotene beta-ring hydroxylase activity","type":"related"}],"termid":"GO:0010291"}


id: GO:1904279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase V.","definition_xrefs":["GO_REF:0000058","PMID:24726328","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"transcription by RNA polymerase V","termid":"GO:0001060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0006355","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of transcription by RNA polymerase V","synonyms":[{"name":"regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"regulation of transcription from RNA polymerase V promoter","type":"exact"}],"termid":"GO:1904279"}


id: GO:0080090
data:
  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id: MONDO:0100218
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id: GO:0035156
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id: PBO:0038406
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id: MONDO:0014072
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id: PBO:0049944
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id: MONDO:0013906
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id: GO:0061354
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id: GO:0043042
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id: GO:0034349
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id: PBO:0061614
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id: GO:0106076
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id: MONDO:0019763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Laryngo-tracheo-esophageal cleft (LC) type 3 is a congenital respiratory tract anomaly characterized by a cleft extending through the cricoid cartilage, sometimes into the cervical trachea, with severe swallowing disorders, lung infections and pulmonary damage.","definition_xrefs":["Orphanet:93940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheoesophageal cleft","termid":"MONDO:0016060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft type 3","secondary_identifiers":["GARD:16833","MEDGEN:667241","UMLS:C0584825"],"synonyms":[{"name":"LTEC III","type":"exact"},{"name":"LTEC3","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft type 3","type":"exact"}],"termid":"MONDO:0019763","xrefs":{"Monarch":{"xref_id":"0019763"}}}


id: PBO:0073756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 10","termid":"PBO:0073756"}


id: MONDO:0002739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the extrahepatic bile ducts. It is characterized by the presence of extracellular mucin that constitutes more than fifty-percent of the tumor.","definition_xrefs":["NCIT:C5846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct adenocarcinoma","termid":"MONDO:0002665"},{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic bile duct mucinous adenocarcinoma","secondary_identifiers":["UMLS:C0861856","DOID:3698","MEDGEN:167830"],"synonyms":[{"name":"bile duct colloid carcinoma","type":"exact"},{"name":"bile duct colloidal carcinoma","type":"exact"},{"name":"bile duct mucinous adenocarcinoma","type":"exact"},{"name":"colloid adenocarcinoma of bile duct","type":"exact"},{"name":"colloid adenocarcinoma of extrahepatic bile duct","type":"exact"},{"name":"colloid adenocarcinoma of the bile duct","type":"exact"},{"name":"colloid adenocarcinoma of the extrahepatic bile duct","type":"exact"},{"name":"colloid bile duct adenocarcinoma","type":"exact"},{"name":"colloid bile duct carcinoma","type":"exact"},{"name":"colloid carcinoma of bile duct","type":"exact"},{"name":"colloid carcinoma of the bile duct","type":"exact"},{"name":"colloid extrahepatic bile duct adenocarcinoma","type":"exact"},{"name":"colloidal adenocarcinoma of bile duct","type":"exact"},{"name":"colloidal adenocarcinoma of extrahepatic bile duct","type":"exact"},{"name":"colloidal adenocarcinoma of the bile duct","type":"exact"},{"name":"colloidal adenocarcinoma of the extrahepatic bile duct","type":"exact"},{"name":"colloidal bile duct adenocarcinoma","type":"exact"},{"name":"colloidal bile duct carcinoma","type":"exact"},{"name":"colloidal carcinoma of bile duct","type":"exact"},{"name":"colloidal carcinoma of the bile duct","type":"exact"},{"name":"colloidal extrahepatic bile duct adenocarcinoma","type":"exact"},{"name":"extrahepatic bile duct mucinous adenocarcinoma","type":"exact"},{"name":"mucinous adenocarcinoma of bile duct","type":"exact"},{"name":"mucinous adenocarcinoma of extrahepatic bile duct","type":"exact"},{"name":"mucinous adenocarcinoma of the bile duct","type":"exact"},{"name":"mucinous adenocarcinoma of the extrahepatic bile duct","type":"exact"},{"name":"mucinous bile duct adenocarcinoma","type":"exact"},{"name":"mucinous carcinoma of bile duct","type":"exact"},{"name":"mucinous carcinoma of the bile duct","type":"exact"},{"name":"mucinous extrahepatic bile duct adenocarcinoma","type":"exact"}],"termid":"MONDO:0002739","xrefs":{"Monarch":{"xref_id":"0002739"}}}


id: MONDO:0011270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 8","secondary_identifiers":["MEDGEN:400539","UMLS:C1864472","GARD:15351","OMIM:602759","MESH:C566426"],"synonyms":[{"name":"HPC8","type":"related"},{"name":"predisposing for prostate cancer","type":"related"},{"name":"prostate cancer, hereditary, 8","type":"exact"},{"name":"prostate cancer, hereditary, type 8","type":"exact"},{"name":"prostate cancer, susceptibility to","type":"related"}],"termid":"MONDO:0011270","xrefs":{"Monarch":{"xref_id":"0011270"}}}


id: GO:0050776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immune response","secondary_identifiers":["Reactome:R-HSA-198933"],"termid":"GO:0050776"}


id: GO:0075253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of uredospore formation, a process in which an asexual, dikaryotic, often rusty-colored spore, is formed in a structure called a uredinium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043945"},{"relation_name":"is_a","term_name":"regulation of uredospore formation","termid":"GO:0075252"},{"relation_name":"positively_regulates","term_name":"uredospore formation","termid":"GO:0075251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of uredospore formation","synonyms":[{"name":"positive regulation of ureidospore formation","type":"exact"}],"termid":"GO:0075253"}


id: PATO:0001137
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001137 ig g concentration (obsolete PATO:0001137)","termid":"PATO:0001137"}


id: RO:HOM0000011
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves genes that diverged after a duplication event.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_paralogy_relationship_with","synonyms":[{"name":"paralogous to","type":"exact"}],"termid":"RO:HOM0000011"}


id: MONDO:0010068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic disorder characterized by bone marrow failure, spinal abnormalities, saddle nose, and metaphysical striation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, sponastrime type","secondary_identifiers":["ICD9:756.9","GARD:4970","MEDGEN:266247","UMLS:C1300260","NCIT:C129031","DOID:5684","Orphanet:93357","MESH:C535786","SCTID:389161008","OMIM:271510"],"synonyms":[{"name":"Sponastrime dysplasia","type":"related"},{"name":"short limb dwarfism with saddle nose, spinal alterations, and metaphyseal striation","type":"related"},{"name":"short-limb dwarfism with saddle Nose, spinal alterations, and metaphyseal striation","type":"related"},{"name":"sponastrime dysplasia","type":"exact"},{"name":"spondylar and nasal alterations with striated metaphyses","type":"related"},{"name":"spondylar and nasal alterations-striated metaphyses syndrome","type":"exact"},{"name":"spondylar and nasal changes with striations of the metaphyses (SPONASTRIME) dysplasia","type":"exact"},{"name":"spondylar and nasal changes with triations of the metaphyses (SPONASTRIME) dysplasia","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia Sponastrime type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, Sponastrime type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia, sponastrime type","type":"exact"}],"termid":"MONDO:0010068","xrefs":{"Monarch":{"xref_id":"0010068"}}}


id: PBO:0112850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 9-3","termid":"PBO:0112850"}


id: GO:0021673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 7. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:cls","GOC:curators","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 7 morphogenesis","termid":"GO:0021671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 7 formation","termid":"GO:0021673"}


id: PBO:0083809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein with distinct roles in two nuclear pore subcomplexes; catalyzes its own proteolytic cleavage in vivo to generate a C-terminal fragment that is a structural component of the Nup84p subcomplex (with roles in NPC biogenesis and localization of genes to the nuclear periphery), and an N-terminal fragment that is one of several FG-nucleoporins within the NPC central core directly responsible for nucleocytoplasmic transport; homologous to human NUP98","termid":"PBO:0083809"}


id: PBO:0048409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GASK1B antisense RNA 1","termid":"PBO:0048409"}


id: PBO:0004370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal protein Syp1 (predicted)","termid":"PBO:0004370"}


id: PBO:0089635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, iron ion Mrs3","termid":"PBO:0089635"}


id: GO:0002713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lymphocyte mediated immunity","termid":"GO:0002707"},{"relation_name":"is_a","term_name":"regulation of B cell mediated immunity","termid":"GO:0002712"},{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002823"},{"relation_name":"negatively_regulates","term_name":"B cell mediated immunity","termid":"GO:0019724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell mediated immunity","synonyms":[{"name":"down regulation of B cell mediated immunity","type":"exact"},{"name":"down-regulation of B cell mediated immunity","type":"exact"},{"name":"downregulation of B cell mediated immunity","type":"exact"},{"name":"inhibition of B cell mediated immunity","type":"narrow"},{"name":"negative regulation of B lymphocyte mediated immunity","type":"exact"},{"name":"negative regulation of B-cell mediated immunity","type":"exact"},{"name":"negative regulation of B-lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0002713"}


id: PR:Q9P7Y4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of RNA polymerase II transcription subunit 14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12809:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.10c","secondary_identifiers":["UniProtKB:Q9P7Y4"],"synonyms":[{"name":"SPBC1A4.10c","type":"related"},{"name":"Spom972h-MED14","type":"exact"},{"name":"mediator complex subunit 14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mediator of RNA polymerase II complex subunit pmc1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"pmc1","type":"related"}],"termid":"PR:Q9P7Y4"}


id: PBO:0049791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 26","termid":"PBO:0049791"}


id: PBO:0081582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 511","termid":"PBO:0081582"}


id: GO:0005660
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A complex of proteins that interacts with delta-DNA polymerase, promoting elongation. In humans it is a heteropentamer of subunits of 140/145, 40, 38, 37 and 36.5 kDa, which form a complex with the proliferating cell nuclear antigen (PCNA) in the presence of ATP.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete delta-DNA polymerase cofactor complex (obsolete GO:0005660)","synonyms":[{"name":"delta DNA polymerase cofactor complex","type":"exact"},{"name":"delta-DNA polymerase cofactor complex","type":"exact"}],"termid":"GO:0005660"}


id: FYPO:0006357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromatin remodeling, i.e. any dynamic structural change to chromatin, occurs to a lower extent than normal when the cell is subject to glucose starvation.","definition_xrefs":["PMID:28674280","PomBase:mah","GO:0006338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"decreased chromatin remodeling during glucose starvation","synonyms":[{"name":"decreased chromatin modeling during glucose starvation","type":"exact"},{"name":"decreased chromatin remodeling during glucose depletion","type":"exact"},{"name":"decreased chromatin remodeling during glucose deprivation","type":"related"},{"name":"decreased chromatin remodeling during glucose limitation","type":"related"},{"name":"decreased chromatin remodelling during glucose starvation","type":"exact"},{"name":"reduced decreased chromatin remodeling during glucose starvation","type":"exact"}],"termid":"FYPO:0006357"}


id: PBO:0091372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER zinc importer, CDF family, Zhf1","termid":"PBO:0091372"}


id: FYPO:0002314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of all-trans-geranylgeranyl diphosphate (GGPP) measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular GGPP level","termid":"FYPO:0002323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"GGPP absent from cell","synonyms":[{"name":"2-trans,6-trans,10-trans-geranylgeranyl diphosphate absent from cell","type":"exact"},{"name":"GGPP absent from cell during mitotic cell cycle","type":"related"},{"name":"GGPP absent from cell during vegetative growth","type":"exact"},{"name":"all-trans-geranylgeranyl diphosphate absent from cell","type":"exact"},{"name":"all-trans-geranylgeranyl pyrophosphate absent from cell","type":"exact"}],"termid":"FYPO:0002314"}


id: MONDO:0008786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sideroblastic anemia","termid":"MONDO:0015194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"pyridoxine-responsive sideroblastic anemia","secondary_identifiers":["MESH:C565954","OMIM:206000","UMLS:C1859787","DOID:0060066","SCTID:191260004","MEDGEN:395346"],"synonyms":[{"name":"B6-responsive sideroblastic anaemia","type":"related"},{"name":"B6-responsive sideroblastic anemia","type":"related"},{"name":"anaemia congenital sideroblastic B6-responsive","type":"related"},{"name":"anemia congenital sideroblastic B6-responsive","type":"related"},{"name":"anemia, congenital sideroblastic, B6-responsive","type":"related"},{"name":"anemia, sideroblastic, pyridoxine-responsive, autosomal recessive","type":"related"},{"name":"sideroblastic anaemia pyridoxine-responsive autosomal recessive","type":"related"},{"name":"sideroblastic anemia pyridoxine-responsive autosomal recessive","type":"related"}],"termid":"MONDO:0008786","xrefs":{"Monarch":{"xref_id":"0008786"}}}


id: PBO:0083035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta 2-isopentenyl pyrophosphate:tRNA isopentenyl transferase; required for biosynthesis of isopentenyladenosine in mitochondrial and cytoplasmic tRNAs; also has a role in tRNA gene-mediated silencing; gene encodes two isozymic forms; converts to a prion form, prion conversion contributes to azole antifungal resistance by upregulating ergosterol biosynthesis; homolog of human TRIT1, a mutation in which is associated with severe combined respiratory chain defects","termid":"PBO:0083035"}


id: PBO:0086054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, secreted when constitutively expressed; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the cell periphery, SWAT-GFP fusion also localizes to the extracellular region, and mCherry fusion also localizes to the vacuole; deletion mutants are viable and have elevated levels of Ty1 retrotransposition and Ty1 cDNA","termid":"PBO:0086054"}


id: PBO:0055260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2687","termid":"PBO:0055260"}


id: MONDO:0001896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal accumulation of cerebrospinal fluid within the ventricles of the brain that occurs as a consequence of an obstruction at any location within the ventricular system that prevents cerebrospinal fluid flowing into the subarachnoid space.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus","termid":"MONDO:0001150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obstructive hydrocephalus","secondary_identifiers":["MEDGEN:108198","DOID:14159","UMLS:C0549423","ICD10CM:G91.1","SCTID:230746009","ICD9:331.4","NCIT:C116347"],"synonyms":[{"name":"non-communicating hydrocephalus","type":"exact"}],"termid":"MONDO:0001896","xrefs":{"Monarch":{"xref_id":"0001896"}}}


id: PBO:0074123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC30A6 pseudogene 1","termid":"PBO:0074123"}


id: GO:0045456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ecdysteroids, a group of polyhydroxylated ketosteroids which initiate post-embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ecdysteroid biosynthetic process","synonyms":[{"name":"ecdysteroid anabolism","type":"exact"},{"name":"ecdysteroid biosynthesis","type":"exact"},{"name":"ecdysteroid formation","type":"exact"},{"name":"ecdysteroid synthesis","type":"exact"}],"termid":"GO:0045456"}


id: GO:2000844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of testosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid transport","termid":"GO:0032369"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"regulation of testosterone secretion","termid":"GO:2000843"},{"relation_name":"negatively_regulates","term_name":"testosterone secretion","termid":"GO:0035936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of testosterone secretion","termid":"GO:2000844"}


id: MONDO:0007150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A corneal disease in which there is a deposition of phospholipid and cholesterol in the corneal stroma and anterior sclera.","definition_xrefs":["MESH:D001112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal degeneration","termid":"MONDO:0001515"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"arcus senilis","secondary_identifiers":["EFO:1000818","icd11.foundation:2142011301","MedDRA:10003082","MEDGEN:8179","UMLS:C0003742","DOID:11342","OMIM:107800","SCTID:231924000"],"synonyms":[{"name":"arcus corneae","type":"related"},{"name":"arcus of cornea","type":"exact"},{"name":"arcus senilis","type":"exact"},{"name":"corneal arcus","type":"exact"}],"termid":"MONDO:0007150","xrefs":{"Monarch":{"xref_id":"0007150"}}}


id: PBO:0078616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 65","termid":"PBO:0078616"}


id: PBO:0058851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8080","termid":"PBO:0058851"}


id: PBO:0051606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 31","termid":"PBO:0051606"}


id: GO:0032564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dATP, deoxyadenosine triphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl deoxyribonucleotide binding","termid":"GO:0032558"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"dATP binding","termid":"GO:0032564"}


id: GO:0031226
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of plasma membrane (obsolete GO:0031226)","synonyms":[{"name":"intrinsic to plasma membrane","type":"narrow"}],"termid":"GO:0031226"}


id: GO:0042135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter catabolic process (obsolete GO:0042135)","synonyms":[{"name":"neurotransmitter breakdown","type":"exact"},{"name":"neurotransmitter catabolism","type":"exact"},{"name":"neurotransmitter degradation","type":"exact"}],"termid":"GO:0042135"}


id: PBO:0069122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 371, pseudogene","termid":"PBO:0069122"}


id: FYPO:0009075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing fructose as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0001985","FYPO:0002057","FYPO:0005447","FYPO:0000003","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth on fructose carbon source","synonyms":[{"name":"decreased growth on fructose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on fructose carbon source","type":"exact"},{"name":"reduced cell growth on fructose carbon source","type":"related"},{"name":"slow cell growth on fructose carbon source","type":"narrow"}],"termid":"FYPO:0009075"}


id: PBO:0069251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 506, pseudogene","termid":"PBO:0069251"}


id: MONDO:0800444
data:
  {"annotated_genes":["SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800445"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02231":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Birt-Hogg-Dube syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0346010","MEDGEN:91070","OMIMPS:135150"],"synonyms":[{"name":"BHD","type":"exact"}],"termid":"MONDO:0800444","terms_by_termid":{"MONDO:0800445":null},"xrefs":{"Monarch":{"xref_id":"0800444"}}}


id: MONDO:0017333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypomyelinating leukodystrophy with or without oligondontia and/or hypogonadism (obsolete MONDO:0017333)","termid":"MONDO:0017333","xrefs":{"Monarch":{"xref_id":"0017333"}}}


id: PBO:0055490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2924","termid":"PBO:0055490"}


id: MOD:01842
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues to S-(2-aminovinyl)-L-cysteine.","definition_xrefs":["PubMed:20805503","RESID:AA0548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(2-aminovinyl)-cysteine","termid":"MOD:01851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(2-aminovinyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(Z)-2-aminoethenyl]sulfanyl)propanoic acid","type":"exact"},{"name":"(R,Z)-S-(2-aminovinyl)cysteine","type":"exact"},{"name":"S-(2-aminovinyl)-L-cysteine","type":"exact"}],"termid":"MOD:01842"}


id: PBO:0049974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1C","termid":"PBO:0049974"}


id: PBO:0091164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit K","termid":"PBO:0091164"}


id: PBO:0047049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 110 member D","termid":"PBO:0047049"}


id: PATO:0001971
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having secondary branches freely branching toward the margin.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cladodromous","termid":"PATO:0001971"}


id: PBO:0078855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 3","termid":"PBO:0078855"}


id: MONDO:0014977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive condition caused by pathogenic variant(s) of the POGLUT1 gene, encoding protein O-glucosyltransferase 1. It is characterized by progressive muscular dystrophy, primarily affecting the proximal muscles, resulting in difficulty walking. A characteristic finding of “inside-to-outside” fatty degeneration on muscle imaging has been noted in patients.","definition_xrefs":["PMID:1897643","PMID:30055862","PMID:27807076","NCIT:C142082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"disorder of protein O-glycosylation","termid":"MONDO:0017741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005336","MONDO:0002320","MONDO:0024322","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2R1","secondary_identifiers":["OMIM:617232","UMLS:C4310660","MEDGEN:934627","Orphanet:480682","MONDO:0018817","GARD:17869","DOID:0080762"],"synonyms":[{"name":"LGMD2Z","type":"exact"},{"name":"POGLUT1 autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in POGLUT1","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy type 2Z","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2Z","type":"exact"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 21","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2Z","type":"exact"}],"termid":"MONDO:0014977","xrefs":{"Monarch":{"xref_id":"0014977"}}}


id: GO:0046464
data:
  {"annotated_genes":["SJAG_02543","SJAG_03604","SJAG_01036","SJAG_02089"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117976,92223,71898,98797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of acylglycerol, any mono-, di- or triester of glycerol with (one or more) fatty acids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"},{"relation_name":"is_a","term_name":"neutral lipid catabolic process","termid":"GO:0046461"},{"relation_name":"is_a","term_name":"glycerolipid catabolic process","termid":"GO:0046503"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02543":null,"SJAG_03604":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"acylglycerol catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"acylglycerol breakdown","type":"exact"},{"name":"acylglycerol catabolism","type":"exact"},{"name":"acylglycerol degradation","type":"exact"}],"termid":"GO:0046464","terms_by_termid":{"GO:0019433":null}}


id: PBO:0040509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine vasopressin induced 1","termid":"PBO:0040509"}


id: PBO:0113328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; binds zinc; phosphomutants exhibit phenotypes, suggesting functionality of phosphosites; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus; YCR087C-A is not an essential gene","termid":"PBO:0113328"}


id: PBO:0004890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine deaminase (predicted)","termid":"PBO:0004890"}


id: PBO:0049639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 42","termid":"PBO:0049639"}


id: GO:0031775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lutropin-choriogonadotropic hormone receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"lutropin-choriogonadotropic hormone receptor binding","synonyms":[{"name":"lutropin-choriogonadotropic hormone receptor ligand","type":"narrow"}],"termid":"GO:0031775"}


id: PBO:0053676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 861","termid":"PBO:0053676"}


id: MONDO:0005575
data:
  {"annotated_genes":["SJAG_00980","SJAG_04699","SJAG_04394","SJAG_02426","SJAG_02231","SJAG_01082","SJAG_02226","SJAG_01837","SJAG_02748","SJAG_04206","SJAG_01620","SJAG_02187","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86810,86811,86812,86813,86814,86815,86816,86817,87662],"is_not":false,"summary":null,"term":"MONDO:0005575"},{"annotations":[86702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[85526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[85974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[85976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[85986,85987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the colon or rectum. Representative examples include carcinoma, lymphoma, and sarcoma.","definition_xrefs":["NCIT:C4978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal neoplasm","termid":"MONDO:0005335"},{"relation_name":"is_a","term_name":"intestinal cancer","termid":"MONDO:0005814"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_01082":null,"SJAG_01620":null,"SJAG_01837":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02426":null,"SJAG_02748":null,"SJAG_03453":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"colorectal cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:83428","SCTID:363510005","UMLS:C0346629","DOID:9256","OMIM:114500","DOID:5672","Orphanet:466667"],"synonyms":[{"name":"CRC","type":"related"},{"name":"cancer of colorectum","type":"exact"},{"name":"cancer of large bowel","type":"exact"},{"name":"cancer of large intestine","type":"exact"},{"name":"cancer of the large bowel","type":"exact"},{"name":"colon cancer","type":"related"},{"name":"colon cancer, advanced, somatic","type":"exact"},{"name":"colon cancer, somatic","type":"exact"},{"name":"colon cancer, susceptibility to, autosomal dominant, somatic mutation","type":"related"},{"name":"colorectal cancer","type":"exact"},{"name":"colorectal cancer with chromosomal instability, somatic","type":"exact"},{"name":"colorectal cancer, autosomal dominant, somatic mutation","type":"exact"},{"name":"colorectal cancer, somatic","type":"exact"},{"name":"colorectal cancer, susceptibility to, autosomal dominant, somatic mutation","type":"exact"},{"name":"colorectum cancer","type":"exact"},{"name":"large intestine cancer","type":"related"},{"name":"malignant colorectal neoplasm","type":"exact"},{"name":"malignant colorectal tumor","type":"exact"},{"name":"malignant colorectal tumour","type":"exact"},{"name":"malignant colorectum neoplasm","type":"exact"},{"name":"malignant large bowel neoplasm","type":"exact"},{"name":"malignant large bowel tumor","type":"exact"},{"name":"malignant large bowel tumour","type":"exact"},{"name":"malignant large intestine neoplasm","type":"exact"},{"name":"malignant large intestine tumor","type":"exact"},{"name":"malignant large intestine tumour","type":"exact"},{"name":"malignant neoplasm of colorectum","type":"exact"},{"name":"malignant neoplasm of large bowel","type":"exact"},{"name":"malignant neoplasm of large intestine","type":"exact"},{"name":"malignant neoplasm of the large bowel","type":"exact"},{"name":"malignant neoplasm of the large intestine","type":"exact"},{"name":"malignant tumor of large bowel","type":"exact"},{"name":"malignant tumor of large intestine","type":"exact"},{"name":"malignant tumor of the large bowel","type":"exact"},{"name":"malignant tumor of the large intestine","type":"exact"},{"name":"malignant tumour of large bowel","type":"exact"},{"name":"malignant tumour of large intestine","type":"exact"},{"name":"malignant tumour of the large bowel","type":"exact"},{"name":"malignant tumour of the large intestine","type":"exact"}],"termid":"MONDO:0005575","terms_by_termid":{"MONDO:0005575":null,"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null},"xrefs":{"Monarch":{"xref_id":"0005575"}}}


id: GO:0010997
data:
  {"annotated_genes":["SJAG_03809","SJAG_03858","SJAG_01330","SJAG_00666","SJAG_04853","SJAG_00071","SJAG_04671","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76901,79423,79443,80296,80668,99698,106683,115948],"is_not":false,"summary":null,"term":"GO:0010997"}]},"cv_name":"molecular_function","definition":"Binding to an anaphase-promoting complex. A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00666":null,"SJAG_01330":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04671":null,"SJAG_04699":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"anaphase-promoting complex binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"APC binding","type":"exact"}],"termid":"GO:0010997","terms_by_termid":{"GO:0010997":null}}


id: MONDO:0004399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epithelial malignant thymoma (obsolete MONDO:0004399)","termid":"MONDO:0004399","xrefs":{"Monarch":{"xref_id":"0004399"}}}


id: MONDO:1012924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cataract that occurs in dogs due to a mutation in the FYCO1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cataract, non-human animal","termid":"MONDO:1012962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cataract, FYCO1-related, dog","secondary_identifiers":["OMIA:002536-9615"],"synonyms":[{"name":"Juvenile cataract","type":"related"}],"termid":"MONDO:1012924","xrefs":{"Monarch":{"xref_id":"1012924"}}}


id: MONDO:0006928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete proliferative vitreoretinopathy (obsolete MONDO:0006928)","termid":"MONDO:0006928","xrefs":{"Monarch":{"xref_id":"0006928"}}}


id: PBO:0081181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger GATA like protein 1","termid":"PBO:0081181"}


id: FYPO:0000608
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[119962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in M phase under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal mitosis","termid":"FYPO:0000337"},{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"abnormal mitotic M phase progression","termid":"FYPO:0000607"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_04284":null,"SJAG_04464":null},"genotype_count":2,"genotypes_by_uniquename":{"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"abnormal cell cycle arrest in mitotic M phase","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04284"],"single_locus_genotype_uniquenames":["nup61delta"],"synonyms":[{"name":"abnormal cell cycle arrest in M phase during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic M phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in M phase","type":"exact"},{"name":"abnormal mitotic cell cycle arrest with condensed chromosomes","type":"related"},{"name":"abnormal mitotic nuclear division arrest","type":"exact"},{"name":"mitotic cell cycle arrest in M-phase","type":"exact"},{"name":"mitotic cell cycle progression in M phase: arrested","type":"related"}],"termid":"FYPO:0000608","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000619":null,"FYPO_EXT:0000001":null}}


id: FYECO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium containing sucrose, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose MM","synonyms":[{"name":"fructose minimal medium","type":"exact"}],"termid":"FYECO:0000382"}


id: PBO:0058202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4495","termid":"PBO:0058202"}


id: GO:0008335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of the structural integrity of the ring canals connecting the female germline cyst.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin structure organization","termid":"GO:0031032"},{"relation_name":"part_of","term_name":"ovarian nurse cell to oocyte transport","termid":"GO:0007300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036","GO:0006810"],"is_obsolete":false,"name":"female germline ring canal stabilization","synonyms":[{"name":"nurse cell ring canal stabilization","type":"narrow"},{"name":"ovarian ring canal stabilization","type":"narrow"}],"termid":"GO:0008335"}


id: GO:1904138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in notochord morphogenesis.","definition_xrefs":["GOC:dph","PMID:24892953","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in gastrulation","termid":"GO:1904105"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in notochord morphogenesis","termid":"GO:1904136"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in notochord morphogenesis","termid":"GO:1904126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in notochord morphogenesis","synonyms":[{"name":"activation of convergent extension involved in notochord morphogenesis","type":"narrow"},{"name":"up regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"up-regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"upregulation of convergent extension involved in notochord morphogenesis","type":"exact"}],"termid":"GO:1904138"}


id: GO:0042179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotine, (S)(-)-3-(1-methyl-2-pyrrolidinyl)pyridine.","definition_xrefs":["GOC:sm","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nicotine metabolic process","termid":"GO:0018933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nicotine biosynthetic process","synonyms":[{"name":"nicotine anabolism","type":"exact"},{"name":"nicotine biosynthesis","type":"exact"},{"name":"nicotine formation","type":"exact"},{"name":"nicotine synthesis","type":"exact"}],"termid":"GO:0042179"}


id: PBO:0074847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 37","termid":"PBO:0074847"}


id: PBO:0073421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEZ6L antisense RNA 1","termid":"PBO:0073421"}


id: PBO:0061264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch receptor 4","termid":"PBO:0061264"}


id: PR:O74553
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-dihydrouridine synthase 4-like that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04755","PANTHER:PTHR11082:SF6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.15","secondary_identifiers":["UniProtKB:O74553"],"synonyms":[{"name":"Spom972h-DUS4L","type":"exact"},{"name":"tRNA-dihydrouridine synthase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74553"}


id: MONDO:0032641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial congenital mirror movements","termid":"MONDO:0016558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"mirror movements 4","secondary_identifiers":["UMLS:C4748869","MEDGEN:1648342","GARD:16333","OMIM:618264"],"synonyms":[{"name":"MIRROR MOVEMENTS 4","type":"related"},{"name":"MRMV4","type":"related"}],"termid":"MONDO:0032641","xrefs":{"Monarch":{"xref_id":"0032641"}}}


id: GO:1904994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte adhesion to vascular endothelial cell.","definition_xrefs":["GOC:TermGenie","GOC:bc","PMID:23897866","GOC:BHF_miRNA","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte cell-cell adhesion","termid":"GO:1903037"},{"relation_name":"regulates","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"}


id: PBO:0046724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecotropic viral integration site 2B","termid":"PBO:0046724"}


id: PBO:0002543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endodeoxyribonuclease Pnu1","termid":"PBO:0002543"}


id: PBO:0084877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; null mutant does not grow on glycerol, is sensitive to 2,4-dichlorophenol, and accumulates large lipid droplets","termid":"PBO:0084877"}


id: PBO:0074742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 101B","termid":"PBO:0074742"}


id: GO:0015233
data:
  {"annotated_genes":["SJAG_05175"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72871],"is_not":false,"summary":null,"term":"GO:0015233"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of pantothenate across a membrane. Pantothenate is the anion of pantothenic acid, the amide of beta-alanine and pantoic acid; it is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.","definition_xrefs":["ISBN:0721662544","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"pantothenate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pantothenate transporter activity","type":"broad"},{"name":"vitamin B5 transmembrane transporter activity","type":"exact"}],"termid":"GO:0015233","terms_by_termid":{"GO:0015233":null}}


id: PBO:0091783
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Facilitated Nutritional eXit","termid":"PBO:0091783"}


id: MOD:00971
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxohistidine (from histidine)","termid":"MOD:00971"}


id: GO:0035197
data:
  {"annotated_genes":["SJAG_03042","SJAG_04061","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89102,112595,118505],"is_not":false,"summary":null,"term":"GO:0035197"}]},"cv_name":"molecular_function","definition":"Binding to a small interfering RNA, a 21-23 nucleotide RNA that is processed from double stranded RNA (dsRNA) by an RNAse enzyme.","definition_xrefs":["PMID:15066275","PMID:15066283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory RNA binding","termid":"GO:0061980"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03042":null,"SJAG_04061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"siRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"small interfering RNA binding","type":"exact"}],"termid":"GO:0035197","terms_by_termid":{"GO:0035197":null}}


id: MONDO:0007044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant skeletal dysplasia caused by mutation(s) in the PRKAR1A gene, encoding cAMP-dependent protein kinase type I-alpha regulatory subunit. It is characterized by short stature, brachydactyly, and characteristic facial features. Resistance to multiple hormones is a common finding.","definition_xrefs":["NCIT:C136464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrodysostosis","termid":"MONDO:0019797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Acrodysostosis 1 with or without hormone resistance","secondary_identifiers":["UMLS:C3276228","OMIM:101800","GARD:15030","MEDGEN:477858"],"synonyms":[{"name":"ACRDYS1","type":"related"},{"name":"ADOHR","type":"exact"},{"name":"Acrodysostosis 1","type":"exact"},{"name":"Acrodysostosis 1 with or without hormone resistance","type":"exact"},{"name":"Acrodysostosis 1, with or without hormone resistance","type":"exact"}],"termid":"MONDO:0007044","xrefs":{"Monarch":{"xref_id":"0007044"}}}


id: PBO:0005039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar H+-ATPase assembly protein Vma21 (predicted)","termid":"PBO:0005039"}


id: FYPO:0007257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body begins later than normal during the first meiotic nuclear division.","definition_xrefs":["PMID:29259000","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body","termid":"FYPO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000631","FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of protein localization to meiotic spindle pole body during meiosis I","synonyms":[{"name":"delayed onset of protein localisation to meiotic spindle pole body during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to meiotic SPB during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to meiotic spindle pole body during first meiotic nuclear division","type":"exact"},{"name":"delayed onset of protein localization to spindle pole body during meiosis I","type":"exact"},{"name":"delayed protein localization to meiotic spindle pole body during meiosis II","type":"exact"}],"termid":"FYPO:0007257"}


id: PBO:0048522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase domain containing 5","termid":"PBO:0048522"}


id: MONDO:0850452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute biphenotypic leukemia that is characterized by blasts that express antigens of both T and myeloid antigens.","definition_xrefs":["DOID:0081039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute biphenotypic leukemia","termid":"MONDO:0020322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"mixed phenotype acute leukemia,T/myeloid","secondary_identifiers":["NCIT:C82213"],"termid":"MONDO:0850452","xrefs":{"Monarch":{"xref_id":"0850452"}}}


id: PBO:0063418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 3A","termid":"PBO:0063418"}


id: PATO:0001523
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which is equal to the quotient of the speed of a sound wave divided by its wavelength.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Sound_wavelength"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wavelength","termid":"PATO:0001242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sound wavelength","termid":"PATO:0001523"}


id: MONDO:0013941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaphyseal chondromatosis with D-2-hydroxyglutaric aciduria is an extremely rare genetic disorder characterized by the unique association of enchondromatosis with D-2 hydroxyglutaric aciduria. Clinical features include enchondromatosis (with short stature, severe metaphyseal dysplasia and mild vertebral involvement), elevated levels of urinary 2-hydroxyglutaric acid and mild developmental delay.","definition_xrefs":["Orphanet:99646"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal chondromatosis with D-2-hydroxyglutaric aciduria","secondary_identifiers":["icd11.foundation:1777127218","OMIM:614875","UMLS:C3553958","MEDGEN:766872","GARD:16902"],"synonyms":[{"name":"metaphyseal Enchondrodysplasia with 2-hydroxyglutaric aciduria","type":"related"},{"name":"metaphyseal chondromatosis with D-2-hydroxyglutaric aciduria","type":"exact"},{"name":"metaphyseal enchondromatosis with D-2-hydroxyglutaric aciduria","type":"related"},{"name":"spondyloenchondromatosis with D-2-hydroxyglutaric aciduria","type":"related"}],"termid":"MONDO:0013941","xrefs":{"Monarch":{"xref_id":"0013941"}}}


id: MONDO:0011152
data:
  {"annotated_genes":["SJAG_02313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87251],"is_not":false,"summary":null,"term":"MONDO:0011152"}]},"cv_name":"mondo","definition":"3-Phosphoglycerate dehydrogenase deficiency (3-PGDH deficiency) is an autosomal recessive form of serine deficiency syndrome characterized clinically in the few reported cases by congenital microcephaly, psychomotor retardation and intractable seizures in the infantile form and by absence seizures, moderate developmental delay and behavioral disorders in the juvenile form","definition_xrefs":["Orphanet:79351"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"3-phosphoglycerate dehydrogenase deficiency","termid":"MONDO:0018491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"PHGDH deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1866174","DOID:0050722","OMIM:601815","GARD:16718","MEDGEN:400935","MESH:C566618"],"synonyms":[{"name":"3-phosphoglycerate dehydrogenase deficiency, infantile/juvenile form","type":"related"},{"name":"PHGDH deficiency","type":"exact"},{"name":"PHGDHD","type":"related"},{"name":"PHOSPHOGLYCERATE dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0011152","terms_by_termid":{"MONDO:0011152":null},"xrefs":{"Monarch":{"xref_id":"0011152"}}}


id: MONDO:0014643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital cataract-microcephaly-nevus flammeus simplex-severe intellectual disability syndrome","secondary_identifiers":["OMIM:616449","UMLS:C4225323","MEDGEN:897292","GARD:17821","Orphanet:464738"],"synonyms":[{"name":"BASEL-Vanagaite-SMIRIN-YOSEF syndrome","type":"related"},{"name":"BVSYS","type":"related"},{"name":"Basel-Vanagait-Smirin-Yosef syndrome","type":"exact"}],"termid":"MONDO:0014643","xrefs":{"Monarch":{"xref_id":"0014643"}}}


id: PR:O94653
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein BMS1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02379","PANTHER:PTHR12858:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein bms1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.06","secondary_identifiers":["UniProtKB:O94653"],"synonyms":[{"name":"Spom972h-BMS1","type":"exact"}],"termid":"PR:O94653"}


id: MONDO:0019541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-infectious posterior uveitis (obsolete MONDO:0019541)","secondary_identifiers":["icd11.foundation:2140734738","Orphanet:90061"],"synonyms":[{"name":"non-infectious choroiditis","type":"exact"}],"termid":"MONDO:0019541","xrefs":{"Monarch":{"xref_id":"0019541"}}}


id: GO:1904249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the extent of age-related resistance.","definition_xrefs":["PMID:19694953","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of innate immune response","termid":"GO:0045824"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of age-related resistance","termid":"GO:1904248"},{"relation_name":"negatively_regulates","term_name":"age-related resistance","termid":"GO:0090644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of age-related resistance","synonyms":[{"name":"down regulation of ARR","type":"exact"},{"name":"down regulation of adult seedling resistance","type":"narrow"},{"name":"down regulation of age-related resistance","type":"exact"},{"name":"down regulation of flowering-induced resistance","type":"narrow"},{"name":"down regulation of mature seedling resistance","type":"narrow"},{"name":"down regulation of senescence-induced resistance","type":"narrow"},{"name":"down-regulation of ARR","type":"exact"},{"name":"down-regulation of adult seedling resistance","type":"narrow"},{"name":"down-regulation of age-related resistance","type":"exact"},{"name":"down-regulation of flowering-induced resistance","type":"narrow"},{"name":"down-regulation of mature seedling resistance","type":"narrow"},{"name":"down-regulation of senescence-induced resistance","type":"narrow"},{"name":"downregulation of ARR","type":"exact"},{"name":"downregulation of adult seedling resistance","type":"narrow"},{"name":"downregulation of age-related resistance","type":"exact"},{"name":"downregulation of flowering-induced resistance","type":"narrow"},{"name":"downregulation of mature seedling resistance","type":"narrow"},{"name":"downregulation of senescence-induced resistance","type":"narrow"},{"name":"inhibition of ARR","type":"narrow"},{"name":"inhibition of adult seedling resistance","type":"narrow"},{"name":"inhibition of age-related resistance","type":"narrow"},{"name":"inhibition of flowering-induced resistance","type":"narrow"},{"name":"inhibition of mature seedling resistance","type":"narrow"},{"name":"inhibition of senescence-induced resistance","type":"narrow"},{"name":"negative regulation of ARR","type":"exact"},{"name":"negative regulation of adult seedling resistance","type":"narrow"},{"name":"negative regulation of flowering-induced resistance","type":"narrow"},{"name":"negative regulation of mature seedling resistance","type":"narrow"},{"name":"negative regulation of senescence-induced resistance","type":"narrow"}],"termid":"GO:1904249"}


id: PBO:0066495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 6","termid":"PBO:0066495"}


id: GO:0045748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or enforces the correct R8 cell spacing in a compound eye.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of R8 cell spacing in compound eye","termid":"GO:0045468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of R8 cell spacing in compound eye","synonyms":[{"name":"activation of R8 spacing","type":"narrow"},{"name":"positive regulation of R8 spacing","type":"exact"},{"name":"stimulation of R8 spacing","type":"narrow"},{"name":"up regulation of R8 spacing","type":"exact"},{"name":"up-regulation of R8 spacing","type":"exact"},{"name":"upregulation of R8 spacing","type":"exact"}],"termid":"GO:0045748"}


id: MONDO:0017850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sirenomelia is a rare, genetic, developmental defect during embryogenesis disorder characterized by fusion of the lower limbs and associated with some degree of lower extremity reduction and persistent vitelline artery. Patients also present severe malformations of the musculoskeletal system (e.g. sacral agenesis), as well as the urogenital and lower gastrointestinal tracts (e.g. renal agenesis, absent bladder, rectal/anal atresia, and absent internal genitalia). Most cases are stillborn, or die during, or shortly after, birth.","definition_xrefs":["Orphanet:3169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial caudal dysgenesis","termid":"MONDO:0010831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirenomelia","secondary_identifiers":["UMLS:C0037205","MedDRA:10049216","icd11.foundation:473306797","MEDGEN:52357","NORD:1720","SCTID:67254002","GARD:7652","NCIT:C118455"],"synonyms":[{"name":"Fused legs and feet","type":"related"},{"name":"Sirenomelus","type":"related"},{"name":"mermaid malformation","type":"related"},{"name":"mermaid syndrome","type":"related"},{"name":"sirenomelia sequence","type":"related"},{"name":"symmelia","type":"exact"}],"termid":"MONDO:0017850","xrefs":{"Monarch":{"xref_id":"0017850"}}}


id: GO:0050081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + maltose 6'-phosphate = D-glucose + D-glucose 6-phosphate.","definition_xrefs":["EC:3.2.1.122","MetaCyc:MALTOSE-6-PHOSPHATE-GLUCOSIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"maltose-6'-phosphate glucosidase activity","secondary_identifiers":["RHEA:20421"],"synonyms":[{"name":"maltose-6'-phosphate 6-phosphoglucohydrolase activity","type":"related"},{"name":"phospho-alpha-glucosidase activity","type":"related"}],"termid":"GO:0050081"}


id: GO:1904557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-alanine across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["GO_REF:0000069","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine transport","termid":"GO:0015808"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"L-alanine transmembrane transport","termid":"GO:1904557"}


id: MONDO:0007874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Langer-Giedon syndrome, also known as trichorhinophalangeal syndrome type 2, is a very rare, genetic, multiple congenital anomaly disorder characterized by bone abnormalities, distinctive facial features, multiple exostoses, and intellectual disability.","definition_xrefs":["Orphanet:502"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 8","termid":"MONDO:0016907"},{"relation_name":"is_a","term_name":"trichorhinophalangeal syndrome","termid":"MONDO:0017951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"trichorhinophalangeal syndrome type II","secondary_identifiers":["MESH:D015826","UMLS:C0023003","ICD9:759.89","icd11.foundation:315453775","OMIM:150230","MEDGEN:6009","NCIT:C75118","GARD:7801","SCTID:41069008","DOID:4998","MedDRA:10050638"],"synonyms":[{"name":"Giedion-Langer syndrome","type":"related"},{"name":"Langer Giedion syndrome","type":"related"},{"name":"Langer-Giedion syndrome","type":"exact"},{"name":"TRPS 2","type":"related"},{"name":"TRPS2","type":"related"},{"name":"chromosome 8Q24.1 deletion syndrome","type":"related"},{"name":"deletion 8q24.1","type":"exact"},{"name":"monosomy 8q24.1","type":"exact"},{"name":"trichorhinophalangeal dysplasia type II","type":"exact"},{"name":"trichorhinophalangeal syndrome type 2","type":"exact"},{"name":"trichorhinophalangeal syndrome, type 2","type":"related"},{"name":"trichorhinophalangeal syndrome, type II","type":"related"}],"termid":"MONDO:0007874","xrefs":{"Monarch":{"xref_id":"0007874"}}}


id: PBO:0051328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-19 (pseudogene)","termid":"PBO:0051328"}


id: GO:0033630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion mediated by integrin","termid":"GO:0033628"},{"relation_name":"is_a","term_name":"positive regulation of cell adhesion","termid":"GO:0045785"},{"relation_name":"positively_regulates","term_name":"cell adhesion mediated by integrin","termid":"GO:0033627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell adhesion mediated by integrin","synonyms":[{"name":"positive regulation of cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033630"}


id: PBO:0024847
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin binding by Cdc13 and Mcm4 is mutually exclusive","termid":"PBO:0024847"}


id: GO:0043022
data:
  {"annotated_genes":["SJAG_02061","SJAG_03548","SJAG_03012","SJAG_05332","SJAG_01438","SJAG_01117","SJAG_04874","SJAG_02171","SJAG_02026","SJAG_01806","SJAG_04560","SJAG_03658","SJAG_04351","SJAG_05000","SJAG_00750","SJAG_02746","SJAG_03094","SJAG_03882","SJAG_01517","SJAG_02856","SJAG_01074","SJAG_00231","SJAG_01176","SJAG_03629","SJAG_04635","SJAG_00887","SJAG_03232","SJAG_01840","SJAG_03788","SJAG_01917","SJAG_02189","SJAG_02812","SJAG_00188"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60682,62999,66629,68880,73343,77253,77987,78552,80319,80697,89125,91638,98628,101630,110988,113052,118034],"is_not":false,"summary":null,"term":"GO:0043022"},{"annotations":[99038,102972,72406,105944,107642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097177"},{"annotations":[73980,62010,71704,76956,88704,76984,79608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043023"},{"annotations":[74854,77852,99783,103874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043024"}]},"cv_name":"molecular_function","definition":"Binding to a ribosome.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00231":null,"SJAG_00750":null,"SJAG_00887":null,"SJAG_01074":null,"SJAG_01117":null,"SJAG_01176":null,"SJAG_01438":null,"SJAG_01517":null,"SJAG_01806":null,"SJAG_01840":null,"SJAG_01917":null,"SJAG_02026":null,"SJAG_02061":null,"SJAG_02171":null,"SJAG_02189":null,"SJAG_02746":null,"SJAG_02812":null,"SJAG_02856":null,"SJAG_03012":null,"SJAG_03094":null,"SJAG_03232":null,"SJAG_03548":null,"SJAG_03629":null,"SJAG_03658":null,"SJAG_03788":null,"SJAG_03882":null,"SJAG_04351":null,"SJAG_04560":null,"SJAG_04635":null,"SJAG_04874":null,"SJAG_05000":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ribosome binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030376"],"synonyms":[{"name":"ribosome receptor activity","type":"narrow"}],"termid":"GO:0043022","terms_by_termid":{"GO:0043022":null,"GO:0043023":null,"GO:0043024":null,"GO:0097177":null}}


id: MONDO:0021525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the body of uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine benign neoplasm","termid":"MONDO:0000632"},{"relation_name":"is_a","term_name":"corpus uteri neoplasm","termid":"MONDO:0021254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of corpus uteri","secondary_identifiers":["MEDGEN:57808","ICD9:219.1","NCIT:C3608","UMLS:C0153998","SCTID:92021007"],"synonyms":[{"name":"benign corpus uteri neoplasm","type":"exact"},{"name":"benign corpus uteri tumor","type":"exact"},{"name":"benign corpus uteri tumour","type":"exact"},{"name":"benign neoplasm of body of uterus","type":"exact"},{"name":"benign neoplasm of the body of uterus","type":"exact"},{"name":"benign neoplasm of the corpus uteri","type":"exact"},{"name":"benign neoplasm of the uterine body","type":"exact"},{"name":"benign neoplasm of the uterine corpus","type":"exact"},{"name":"benign neoplasm of uterine body","type":"exact"},{"name":"benign neoplasm of uterine corpus","type":"exact"},{"name":"benign tumor of body of uterus","type":"exact"},{"name":"benign tumor of corpus uteri","type":"exact"},{"name":"benign tumor of the body of uterus","type":"exact"},{"name":"benign tumor of the corpus uteri","type":"exact"},{"name":"benign tumor of the uterine body","type":"exact"},{"name":"benign tumor of the uterine corpus","type":"exact"},{"name":"benign tumor of uterine body","type":"exact"},{"name":"benign tumor of uterine corpus","type":"exact"},{"name":"benign tumour of body of uterus","type":"exact"},{"name":"benign tumour of corpus uteri","type":"exact"},{"name":"benign tumour of the body of uterus","type":"exact"},{"name":"benign tumour of the corpus uteri","type":"exact"},{"name":"benign tumour of the uterine body","type":"exact"},{"name":"benign tumour of the uterine corpus","type":"exact"},{"name":"benign tumour of uterine body","type":"exact"},{"name":"benign tumour of uterine corpus","type":"exact"},{"name":"benign uterine body neoplasm","type":"exact"},{"name":"benign uterine body tumor","type":"exact"},{"name":"benign uterine body tumour","type":"exact"},{"name":"benign uterine corpus neoplasm","type":"exact"},{"name":"benign uterine corpus tumor","type":"exact"},{"name":"benign uterine corpus tumour","type":"exact"},{"name":"body of uterus benign neoplasm","type":"exact"}],"termid":"MONDO:0021525","xrefs":{"Monarch":{"xref_id":"0021525"}}}


id: FYPO:0003379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division, in which two chromatids in each chromosome are normally separated, does not occur.","definition_xrefs":["PomBase:mah","GO:0007135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished meiosis","termid":"FYPO:0000474"},{"relation_name":"is_a","term_name":"abnormal meiosis II","termid":"FYPO:0006526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished meiosis II","synonyms":[{"name":"abolished second meiotic nuclear division","type":"exact"},{"name":"absent meiosis II","type":"exact"},{"name":"meiosis II abolished","type":"exact"},{"name":"meiosis II: absent","type":"exact"}],"termid":"FYPO:0003379"}


id: PBO:0057360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ad","termid":"PBO:0057360"}


id: FYPO:0007814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of DNA strand elongation involved in mitotic nuclear DNA replication is increased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah","PMID:34108240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication elongation","termid":"FYPO:0006730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000293"],"is_obsolete":false,"name":"increased rate of mitotic DNA replication elongation during cellular response to hydroxyurea","synonyms":[{"name":"increased rate of DNA replication elongation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased rate of DNA strand elongation involved in mitotic DNA replication during cellular response to hydroxyurea","type":"exact"},{"name":"increased rate of DNA strand elongation involved in nuclear cell cycle DNA replication during cellular response to hydroxyurea","type":"exact"},{"name":"increased rate of mitotic DNA replication elongation during cellular response to HU","type":"exact"},{"name":"increased rate of mitotic DNA replication elongation during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0007814"}


id: GO:0004144
data:
  {"annotated_genes":["SJAG_03609"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77321],"is_not":false,"summary":null,"term":"GO:0004144"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + 1,2-diacylglycerol = CoA + triacylglycerol.","definition_xrefs":["EC:2.3.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol O-acyltransferase activity","termid":"GO:0016411"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"diacylglycerol O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-75900","Reactome:R-HSA-8848580","RHEA:10868","Reactome:R-HSA-549192","Reactome:R-HSA-1482889","MetaCyc:DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN"],"synonyms":[{"name":"1,2-diacylglycerol acyltransferase activity","type":"related"},{"name":"acyl-CoA:1,2-diacylglycerol O-acyltransferase activity","type":"related"},{"name":"diacylglycerol acyltransferase activity","type":"related"},{"name":"diglyceride O-acyltransferase activity","type":"related"},{"name":"diglyceride acyltransferase activity","type":"related"},{"name":"palmitoyl-CoA-sn-1,2-diacylglycerol acyltransferase activity","type":"related"}],"termid":"GO:0004144","terms_by_termid":{"GO:0004144":null}}


id: GO:0047465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acyl-D-glucosamine 6-phosphate = an N-acyl-D-mannosamine 6-phosphate.","definition_xrefs":["RHEA:23932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"N-acylglucosamine-6-phosphate 2-epimerase activity","secondary_identifiers":["MetaCyc:5.1.3.9-RXN","EC:5.1.3.9"],"synonyms":[{"name":"N-acetylglucosmamine 6-phosphate 2-epimerase activity","type":"related"},{"name":"N-acetylmannosamine-6-phosphate 2-epimerase activity","type":"related"},{"name":"N-acyl-D-glucosamine-6-phosphate 2-epimerase activity","type":"related"},{"name":"acylglucosamine phosphate 2-epimerase activity","type":"related"},{"name":"acylglucosamine-6-phosphate 2-epimerase activity","type":"related"},{"name":"acylmannosamine phosphate 2-epimerase activity","type":"related"}],"termid":"GO:0047465"}


id: PBO:0030763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_zinc_ion","termid":"PBO:0030763"}


id: PBO:0039733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein C4","termid":"PBO:0039733"}


id: GO:0046122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any one of a family of organic molecules consisting of a purine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleoside metabolic process","termid":"GO:0009120"},{"relation_name":"is_a","term_name":"purine nucleoside metabolic process","termid":"GO:0042278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"purine deoxyribonucleoside metabolic process","synonyms":[{"name":"purine deoxyribonucleoside metabolism","type":"exact"}],"termid":"GO:0046122"}


id: PBO:0005811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Sal3","termid":"PBO:0005811"}


id: PBO:0090965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex large subunit Rpc1","termid":"PBO:0090965"}


id: PBO:0067400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 507, pseudogene","termid":"PBO:0067400"}


id: PBO:0057275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 498","termid":"PBO:0057275"}


id: GO:0018777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alkyl halide + H2O = alcohol + HCl. Substrates are 1,3(R),4,6(R)-tetrachloro-1,4-cyclohexadiene (forms 2,4,5-trichloro-2,5-cyclohexadiene-1-ol) and 2,4,5-trichloro-2,5-cyclohexadiene-1-ol (forms 2,5-dichloro-2,5-cyclohexadiene-1,4-diol).","definition_xrefs":["PMID:10464214"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,3,4,6-tetrachloro-1,4-cyclohexadiene halidohydrolase activity (obsolete GO:0018777)","termid":"GO:0018777"}


id: FYECO:0000194
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which biotin was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited biotin","termid":"FYECO:0000194"}


id: PBO:0113472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2, a regulator of plasma membrane (PM) homeostasis; TORC2 also regulates actin cytoskeletal dynamics during polarized growth and cell wall integrity; interacts with Slm1p and Slm2p, homologous PH domain-containing TORC2 substrates; BIT2 has a paralog, BIT61, that arose from the whole genome duplication","termid":"PBO:0113472"}


id: MONDO:0035461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic disease with glomerulopathy as a major feature (obsolete MONDO:0035461)","secondary_identifiers":["Orphanet:567554"],"termid":"MONDO:0035461","xrefs":{"Monarch":{"xref_id":"0035461"}}}


id: PBO:0073513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 6","termid":"PBO:0073513"}


id: FYPO:0003562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the horsetail nucleus is normal (i.e. indistinguishable from wild type). The horsetail nucleus forms during the rapid oscillatory movement at meiotic prophase I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear morphology","termid":"FYPO:0001673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal horsetail nucleus morphology","synonyms":[{"name":"normal horsetail nuclear morphology","type":"exact"}],"termid":"FYPO:0003562"}


id: MONDO:0013665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"juvenile myoclonic epilepsy","termid":"MONDO:0009696"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, juvenile myoclonic, susceptibility to, 9","secondary_identifiers":["OMIM:614280","UMLS:C3280332","MEDGEN:481962","DOID:0111328"],"synonyms":[{"name":"EJM9","type":"exact"},{"name":"epilepsy, juvenile myoclonic, susceptibility to, 9","type":"exact"}],"termid":"MONDO:0013665","xrefs":{"Monarch":{"xref_id":"0013665"}}}


id: PATO:0002101
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of having changed from one fully differentiated state into another.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular potency","termid":"PATO:0001397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaplastic","synonyms":[{"name":"trans-differentiated","type":"related"}],"termid":"PATO:0002101"}


id: MONDO:0001884
data:
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id: PBO:0085210
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id: GO:0098772
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id: PBO:0004744
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id: PBO:0067846
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id: PBO:0057161
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id: PBO:0091396
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id: GO:0010494
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id: PBO:0001786
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id: MONDO:0015105
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id: MONDO:0017659
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id: PBO:0030266
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id: PBO:0064834
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id: MONDO:0006713
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"New blood vessels originating from the corneal veins and extending from the limbus into the adjacent corneal stroma. Neovascularization in the superficial and/or deep corneal stroma is a sequel to numerous inflammatory diseases of the ocular anterior segment, such as trachoma, viral interstitial keratitis, microbial keratoconjunctivitis, and the immune response elicited by corneal transplantation.","definition_xrefs":["MESH:D016510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis","termid":"MONDO:0003085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal neovascularization","secondary_identifiers":["DOID:11382","MedDRA:10011031","SCTID:19161004","ICD9:370.60","MEDGEN:43103","icd11.foundation:2077068570","UMLS:C0085109","ICD9:370.6","EFO:1000880"],"termid":"MONDO:0006713","xrefs":{"Monarch":{"xref_id":"0006713"}}}


id: GO:0042609
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id: GO:0043857
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id: PBO:0003143
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  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.1","termid":"PBO:0003143"}


id: PBO:0114506
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id: GO:0009486
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ubiquinol + O2 + 4 H+ = 2 ubiquinone + 2 H2O + 4 H+ [periplasmic space].","definition_xrefs":["RHEA:30251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer activity","termid":"GO:0009055"},{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cytochrome bo3 ubiquinol oxidase activity","secondary_identifiers":["GO:0008827","MetaCyc:RXN0-5268","EC:7.1.1.3","TC:3.D.4.5.1"],"synonyms":[{"name":"cytochrome bo oxidase","type":"exact"},{"name":"cytochrome bo(3) oxidase","type":"exact"},{"name":"cytochrome o ubiquinol oxidase activity","type":"related"}],"termid":"GO:0009486"}


id: GO:0097001
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id: MONDO:1011069
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in Javan langur.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, Javan langur","secondary_identifiers":["OMIA:001033-222416"],"termid":"MONDO:1011069","xrefs":{"Monarch":{"xref_id":"1011069"}}}


id: GO:0031247
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of actin rods, a cellular structure consisting of parallel, hexagonally arranged actin tubules.","definition_xrefs":["GOC:pg","PMID:14706699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0030036","GO:0044085","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"actin rod assembly","synonyms":[{"name":"actin rod formation","type":"related"}],"termid":"GO:0031247"}


id: PBO:0089317
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id: FYPO:0002687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which telomere length is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere morphology during vegetative growth","termid":"FYPO:0006513"},{"relation_name":"is_a","term_name":"normal telomere length","termid":"FYPO:0006515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal telomere length during vegetative growth","synonyms":[{"name":"normal telomere length during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002687"}


id: PBO:0041107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"barttin CLCNK type accessory subunit beta","termid":"PBO:0041107"}


id: PBO:0049689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heart and neural crest derivatives expressed 2","termid":"PBO:0049689"}


id: PBO:0050831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia up-regulated 1","termid":"PBO:0050831"}


id: MONDO:0850008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior segment developmental abnormality with extraocular manifestations","secondary_identifiers":["UMLS:C5681394","Orphanet:519276","MEDGEN:1842782","GARD:22084"],"termid":"MONDO:0850008","xrefs":{"Monarch":{"xref_id":"0850008"}}}


id: GO:0043426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to Myogenic Regulatory Factor (MRF), a member of the basic Helix-Loop-Helix (bHLH) superfamily of transcription factors.","definition_xrefs":["PMID:10966875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bHLH transcription factor binding","termid":"GO:0043425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"MRF binding","secondary_identifiers":["GO:0051576","GO:0051577","GO:0051578","GO:0051579"],"synonyms":[{"name":"Mrf4 binding","type":"narrow"},{"name":"Myf5 binding","type":"narrow"},{"name":"MyoD binding","type":"narrow"},{"name":"myogenin binding","type":"narrow"}],"termid":"GO:0043426"}


id: PBO:0075855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 4","termid":"PBO:0075855"}


id: MONDO:0005989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic disease contracted by the ingestion or fetal transmission of toxoplasma gondii.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coccidiosis","termid":"MONDO:0005707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxoplasmosis","secondary_identifiers":["NCIT:C3418","ICD9:130","MEDGEN:21597","ICD9:130.9","icd11.foundation:738999268","MESH:D014123","UMLS:C0040558","EFO:0007517","ICD10CM:B58","DOID:9965","ICD9:130.7","SCTID:187192000"],"synonyms":[{"name":"Toxoplasma gondii caused disease or disorder","type":"exact"},{"name":"Toxoplasma gondii disease or disorder","type":"exact"},{"name":"Toxoplasma gondii infectious disease","type":"exact"},{"name":"disseminated toxoplasmosis","type":"exact"}],"termid":"MONDO:0005989","xrefs":{"Monarch":{"xref_id":"0005989"}}}


id: MONDO:0012887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 1q32.1.","definition_xrefs":["PMID:18587394","DOID:0110884","PMID:15937090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 23","secondary_identifiers":["MEDGEN:382861","MESH:C567326","OMIM:612381","UMLS:C2676484"],"synonyms":[{"name":"IBD23","type":"exact"},{"name":"inflammatory bowel disease 23","type":"exact"},{"name":"inflammatory bowel disease type 23","type":"exact"}],"termid":"MONDO:0012887","xrefs":{"Monarch":{"xref_id":"0012887"}}}


id: PBO:0026713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_translation_in_response_to_UV","termid":"PBO:0026713"}


id: PBO:0083834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily conserved 19S regulatory particle assembly-chaperone; involved in assembly of the base subcomplex of the 19S proteasomal regulatory particle (RP); non-essential gene; interacts with Rpn4p; protein abundance increases in response to DNA replication stress; ortholog of human p27","termid":"PBO:0083834"}


id: GO:0005054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome integral membrane receptor (obsolete GO:0005054)","synonyms":[{"name":"Pas20p","type":"related"},{"name":"peroxisome integral membrane receptor","type":"exact"}],"termid":"GO:0005054"}


id: PATO:0002261
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's location within another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"located in","termid":"PATO:0002261"}


id: GO:0016712
data:
  {"annotated_genes":["SJAG_04000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60879],"is_not":false,"summary":null,"term":"GO:0016712"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced flavin or flavoprotein and one other donor, and one atom of oxygen is incorporated into one donor.","definition_xrefs":["EC:1.14.14.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","references_by_uniquename":{"GO_REF:0000104":null},"secondary_identifiers":["Reactome:R-HSA-194678","Reactome:R-HSA-211966","GO:0008402","GO:0050381"],"synonyms":[{"name":"aryl hydrocarbon hydroxylase activity","type":"narrow"},{"name":"aryl-4-monooxygenase activity","type":"narrow"},{"name":"cytochrome P450 CYP19","type":"narrow"},{"name":"cytochrome p450 activity","type":"narrow"},{"name":"flavoprotein monooxygenase activity","type":"narrow"},{"name":"flavoprotein-linked monooxygenase activity","type":"narrow"},{"name":"microsomal P-450","type":"narrow"},{"name":"microsomal monooxygenase activity","type":"narrow"},{"name":"microsomal p450 activity","type":"narrow"},{"name":"substrate,reduced-flavoprotein:oxygen oxidoreductase (RH-hydroxylating or -epoxidizing)","type":"related"},{"name":"unspecific monooxygenase activity","type":"narrow"},{"name":"xenobiotic monooxygenase activity","type":"narrow"}],"termid":"GO:0016712","terms_by_termid":{"GO:0016712":null}}


id: MONDO:0001081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute inflammation of the cervix. Clinical manifestations include mucopurulent vaginal discharge and burning sensation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervicitis","termid":"MONDO:0002345"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute cervicitis","secondary_identifiers":["MEDGEN:124346","SCTID:19272000","DOID:10616","icd11.foundation:411422080","UMLS:C0269061","NCIT:C27056"],"synonyms":[{"name":"acute cervicitis (disease)","type":"exact"},{"name":"cervicitis (disease), acute","type":"exact"}],"termid":"MONDO:0001081","xrefs":{"Monarch":{"xref_id":"0001081"}}}


id: PBO:0058982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed lineage kinase domain like pseudokinase","termid":"PBO:0058982"}


id: GO:0002760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an antimicrobial humoral response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antimicrobial humoral response","termid":"GO:0002759"},{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of humoral immune response","termid":"GO:0002922"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"positively_regulates","term_name":"antimicrobial humoral response","termid":"GO:0019730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antimicrobial humoral response","synonyms":[{"name":"activation of antimicrobial humoral response","type":"narrow"},{"name":"stimulation of antimicrobial humoral response","type":"narrow"},{"name":"up regulation of antimicrobial humoral response","type":"exact"},{"name":"up-regulation of antimicrobial humoral response","type":"exact"},{"name":"upregulation of antimicrobial humoral response","type":"exact"}],"termid":"GO:0002760"}


id: MONDO:8000014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of antiphospholipid syndrome.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"antiphospholipid syndrome","termid":"MONDO:8000010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005046"],"is_obsolete":false,"name":"familial antiphospholipid syndrome","secondary_identifiers":["MESH:C531622","UMLS:C2930802","OMIM:107320","MEDGEN:419641"],"synonyms":[{"name":"Hughes syndrome","type":"broad"},{"name":"antiphospholipid syndrome, familial","type":"exact"}],"termid":"MONDO:8000014","xrefs":{"Monarch":{"xref_id":"8000014"}}}


id: PBO:0029368
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029368"}


id: GO:0003426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the polarization of cytoskeletal structures in a growth plate cartilage chondrocyte. This process results in the oriented division of the cell.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity","termid":"GO:0030952"},{"relation_name":"part_of","term_name":"establishment of cell polarity involved in growth plate cartilage chondrocyte division","termid":"GO:0003424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163","GO:0007010"],"is_obsolete":false,"name":"cytoskeleton polarization involved in growth plate cartilage chondrocyte division","termid":"GO:0003426"}


id: PBO:0004116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfide-quinone oxidoreductase","termid":"PBO:0004116"}


id: PBO:0040603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B melanoma antigen","termid":"PBO:0040603"}


id: GO:0045963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving dopamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine metabolic process","termid":"GO:0042053"},{"relation_name":"is_a","term_name":"negative regulation of catecholamine metabolic process","termid":"GO:0045914"},{"relation_name":"negatively_regulates","term_name":"dopamine metabolic process","termid":"GO:0042417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dopamine metabolic process","synonyms":[{"name":"down regulation of dopamine metabolic process","type":"exact"},{"name":"down-regulation of dopamine metabolic process","type":"exact"},{"name":"downregulation of dopamine metabolic process","type":"exact"},{"name":"inhibition of dopamine metabolic process","type":"narrow"},{"name":"negative regulation of dopamine metabolism","type":"exact"}],"termid":"GO:0045963"}


id: GO:1904526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of microtubule binding.","definition_xrefs":["GOC:als","GO_REF:0000059","GOC:TermGenie","PMID:24520051"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microtubule binding (obsolete GO:1904526)","synonyms":[{"name":"regulation of microtubule severing activity","type":"related"},{"name":"regulation of microtubule/chromatin interaction","type":"related"}],"termid":"GO:1904526"}


id: SO:0100018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide binding motif is a short (up to 20 amino acids) polypeptide region of biological interest that contains one or more amino acids experimentally shown to bind to a ligand.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biochemical_region_of_peptide","termid":"SO:0100001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_binding_motif","synonyms":[{"name":"binding","type":"related"},{"name":"polypeptide binding motif","type":"exact"}],"termid":"SO:0100018"}


id: PBO:0040964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 35","termid":"PBO:0040964"}


id: FYPO:0001146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of misfolded glycoprotein degradation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"},{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased misfolded glycoprotein degradation during vegetative growth","synonyms":[{"name":"decreased misfolded glycoprotein catabolic process during vegetative growth","type":"exact"},{"name":"decreased misfolded glycoprotein catabolism during vegetative growth","type":"exact"},{"name":"decreased misfolded glycoprotein degradation during mitotic cell cycle","type":"related"},{"name":"reduced misfolded glycoprotein degradation during vegetative growth","type":"exact"}],"termid":"FYPO:0001146"}


id: PBO:0089072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex WD repeat subunit Gid7","termid":"PBO:0089072"}


id: GO:1900718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of violaceol II biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of violaceol II biosynthetic process","termid":"GO:1900716"},{"relation_name":"positively_regulates","term_name":"violaceol II biosynthetic process","termid":"GO:1900593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of violaceol II biosynthetic process","synonyms":[{"name":"activation of violaceol II anabolism","type":"exact"},{"name":"activation of violaceol II biosynthesis","type":"exact"},{"name":"activation of violaceol II biosynthetic process","type":"narrow"},{"name":"activation of violaceol II formation","type":"exact"},{"name":"activation of violaceol II synthesis","type":"exact"},{"name":"positive regulation of violaceol II anabolism","type":"exact"},{"name":"positive regulation of violaceol II biosynthesis","type":"exact"},{"name":"positive regulation of violaceol II formation","type":"exact"},{"name":"positive regulation of violaceol II synthesis","type":"exact"},{"name":"up regulation of violaceol II anabolism","type":"exact"},{"name":"up regulation of violaceol II biosynthesis","type":"exact"},{"name":"up regulation of violaceol II biosynthetic process","type":"exact"},{"name":"up regulation of violaceol II formation","type":"exact"},{"name":"up regulation of violaceol II synthesis","type":"exact"},{"name":"up-regulation of violaceol II anabolism","type":"exact"},{"name":"up-regulation of violaceol II biosynthesis","type":"exact"},{"name":"up-regulation of violaceol II biosynthetic process","type":"exact"},{"name":"up-regulation of violaceol II formation","type":"exact"},{"name":"up-regulation of violaceol II synthesis","type":"exact"},{"name":"upregulation of violaceol II anabolism","type":"exact"},{"name":"upregulation of violaceol II biosynthesis","type":"exact"},{"name":"upregulation of violaceol II biosynthetic process","type":"exact"},{"name":"upregulation of violaceol II formation","type":"exact"},{"name":"upregulation of violaceol II synthesis","type":"exact"}],"termid":"GO:1900718"}


id: GO:0022007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of directed cell movement in the neural plate resulting in tissue elongation via intercalation of adjacent cells in an epithelial sheet at the midline, leading to narrowing and lengthening of the neural plate.","definition_xrefs":["GOC:jid","GOC:cls","PMID:13679871","PMID:15806586","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"},{"relation_name":"is_a","term_name":"convergent extension involved in organogenesis","termid":"GO:0060029"},{"relation_name":"part_of","term_name":"neural plate elongation","termid":"GO:0014022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in neural plate elongation","termid":"GO:0022007"}


id: PBO:0054099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1455","termid":"PBO:0054099"}


id: PBO:0034297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_symbiosis","termid":"PBO:0034297"}


id: PBO:0082009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 7","termid":"PBO:0082009"}


id: MONDO:0018336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Silver-Russell syndrome due to a point mutation (obsolete MONDO:0018336)","secondary_identifiers":["Orphanet:397590"],"termid":"MONDO:0018336","xrefs":{"Monarch":{"xref_id":"0018336"}}}


id: PBO:0039112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activator of HSP90 ATPase activity 1","termid":"PBO:0039112"}


id: PBO:0030336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_nitrogen_starvation","termid":"PBO:0030336"}


id: PBO:0059229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L1","termid":"PBO:0059229"}


id: PBO:0073685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 7","termid":"PBO:0073685"}


id: GO:0017051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + retinol = adenosine 3',5'-bisphosphate + anhydroretinol.","definition_xrefs":["PMID:9857081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"retinol dehydratase activity","termid":"GO:0017051"}


id: PBO:0004613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDEL receptor (predicted)","termid":"PBO:0004613"}


id: GO:0006116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A metabolic process that results in the oxidation of reduced nicotinamide adenine dinucleotide, NADH, to the oxidized form, NAD+.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete NADH oxidation (obsolete GO:0006116)","synonyms":[{"name":"NAD (reduced) dehydrogenation","type":"exact"},{"name":"NAD (reduced) oxidation","type":"exact"},{"name":"NADH dehydrogenation","type":"exact"},{"name":"reduced NAD dehydrogenation","type":"exact"},{"name":"reduced NAD oxidation","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide dehydrogenation","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide oxidation","type":"exact"}],"termid":"GO:0006116"}


id: PBO:0017557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trans-golgi network aminophospholipid translocase (flippase), Dnf1 (predicted)","termid":"PBO:0017557"}


id: PBO:0077778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 70","termid":"PBO:0077778"}


id: PBO:0087842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Threonine synthase; conserved protein that catalyzes formation of threonine from O-phosphohomoserine; expression is regulated by the GCN4-mediated general amino acid control pathway","termid":"PBO:0087842"}


id: GO:0071450
data:
  {"annotated_genes":["SJAG_03653","SJAG_05181","SJAG_04399","SJAG_04403","SJAG_00668","SJAG_01734","SJAG_03303","SJAG_04632","SJAG_04788"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89727,99606,74671,89306,58105,65335,69273,61054,93466],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen radical stimulus. An oxygen radical is any oxygen species that carries a free electron; examples include hydroxyl radicals and the superoxide anion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen radical","termid":"GO:0000305"},{"relation_name":"is_a","term_name":"cellular response to reactive oxygen species","termid":"GO:0034614"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_01734":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oxygen radical","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0071450","terms_by_termid":{"GO:0019430":null}}


id: PBO:0088688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, implicated in vesicle trafficking or lipid metabolism","termid":"PBO:0088688"}


id: MONDO:0012754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nanophthalmia","termid":"MONDO:0005514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nanophthalmos 3","secondary_identifiers":["UMLS:C2678467","MESH:C567498","GARD:18627","MEDGEN:395628","OMIM:611897"],"synonyms":[{"name":"NNO3","type":"exact"},{"name":"Nanophthalmia 3","type":"related"},{"name":"nanophthalmos 3","type":"exact"}],"termid":"MONDO:0012754","xrefs":{"Monarch":{"xref_id":"0012754"}}}


id: PBO:0075573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPIN2 family pseudogene 1","termid":"PBO:0075573"}


id: MONDO:0018424
data:
  {"annotated_genes":["SJAG_03290","SJAG_01417","SJAG_01164","SJAG_03553","SJAG_02007","SJAG_02306","SJAG_04016","SJAG_03222","SJAG_01147","SJAG_03701","SJAG_03641","SJAG_02397"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015003"},{"annotations":[86977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013762"},{"annotations":[85778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014576"},{"annotations":[85480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011582"},{"annotations":[86005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013675"},{"annotations":[86355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014132"},{"annotations":[85626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014611"},{"annotations":[85692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033282"},{"annotations":[86333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054785"},{"annotations":[86678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957382"},{"annotations":[85547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009529"},{"annotations":[86133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014803"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of lipoate biosynthetic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"inherited fatty acid metabolism disorder","termid":"MONDO:0037858"},{"relation_name":"is_a","term_name":"disorder of organic acid metabolism","termid":"MONDO:0045022"},{"relation_name":"is_a","term_name":"sulfur metabolism disease","termid":"MONDO:0056803"}],"gene_count":12,"genes_by_uniquename":{"SJAG_01147":null,"SJAG_01164":null,"SJAG_01417":null,"SJAG_02007":null,"SJAG_02306":null,"SJAG_02397":null,"SJAG_03222":null,"SJAG_03290":null,"SJAG_03553":null,"SJAG_03641":null,"SJAG_03701":null,"SJAG_04016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"inherited lipoic acid biosynthesis defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:12679","MEDGEN:1843250","UMLS:C5680006","Orphanet:401854"],"synonyms":[{"name":"inborn error of lipoate biosynthetic process","type":"exact"},{"name":"inborn lipoate biosynthetic process disorder","type":"exact"},{"name":"lipoate biosynthesis defect","type":"exact"},{"name":"lipoic acid biosynthesis defect","type":"related"},{"name":"lipoic acid biosynthesis defects","type":"related"},{"name":"rare inborn error of lipoate biosynthetic process","type":"exact"}],"termid":"MONDO:0018424","terms_by_termid":{"MONDO:0009529":null,"MONDO:0011582":null,"MONDO:0013675":null,"MONDO:0013762":null,"MONDO:0014132":null,"MONDO:0014576":null,"MONDO:0014611":null,"MONDO:0014803":null,"MONDO:0015003":null,"MONDO:0033282":null,"MONDO:0054785":null,"MONDO:0957382":null},"xrefs":{"Monarch":{"xref_id":"0018424"}}}


id: MONDO:0011917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the CD2AP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal segmental glomerulosclerosis 3, susceptibility to","secondary_identifiers":["MEDGEN:335850","DOID:0112245","OMIM:607832","UMLS:C1842982"],"synonyms":[{"name":"CD2AP focal segmental glomerulosclerosis","type":"exact"},{"name":"FSGS3","type":"related"},{"name":"focal segmental glomerulosclerosis 3, susceptibility to","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in CD2AP","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 3","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 3, susceptibility to","type":"related"},{"name":"susceptibility to focal segmental glomerulosclerosis 3","type":"related"}],"termid":"MONDO:0011917","xrefs":{"Monarch":{"xref_id":"0011917"}}}


id: GO:0060320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recognition and rejection of self pollen by cells in the stigma, mediated by the sharing and interaction of the single locus incompatibility haplotypes.","definition_xrefs":["GOC:tb","GOC:dph","PMID:34848142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recognition of pollen","termid":"GO:0048544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rejection of self pollen","synonyms":[{"name":"self-incompatibility","type":"related"}],"termid":"GO:0060320"}


id: PBO:0048762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell-less 2, spermatogenesis associated","termid":"PBO:0048762"}


id: FYPO:0001824
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to trifluoperazine. Cells stop growing (and may die) at a concentration of trifluoperazine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to trifluoperazine","synonyms":[{"name":"hypersensitive to trifluoperazine","type":"exact"},{"name":"sensitive to trifluoperazine during mitotic cell cycle","type":"related"},{"name":"sensitive to trifluoperazine during vegetative growth","type":"exact"}],"termid":"FYPO:0001824"}


id: PBO:0088885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Pwp1","termid":"PBO:0088885"}


id: GO:0048072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in the compound eye.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigmentation","termid":"GO:0048069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye pigmentation","termid":"GO:0048072"}


id: MONDO:0009082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"High myopia-sensorineural deafness syndrome is a rare genetic disease characterized by high myopia, typically ranging from -6.0 to -11.0 diopters, and moderate to profound, bilateral, progressive sensorineural hearing loss with prelingual-onset. Affected individuals do not present other systemic, ocular or connective tissue manifestations.","definition_xrefs":["Orphanet:363396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high myopia-sensorineural deafness syndrome","secondary_identifiers":["OMIM:221200","SCTID:720506002","UMLS:C3806275","MEDGEN:812605","DOID:0111628","GARD:12844"],"synonyms":[{"name":"DFNMYP","type":"related"},{"name":"deafness and myopia","type":"related"},{"name":"deafness and myopia syndrome","type":"related"},{"name":"high myopia-sensorineural deafness syndrome","type":"exact"}],"termid":"MONDO:0009082","xrefs":{"Monarch":{"xref_id":"0009082"}}}


id: PBO:0089900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-pseudouridine synthase Deg1","termid":"PBO:0089900"}


id: GO:0003068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by acetylcholine signaling. Acetylcholine is an acetic acid ester of the organic base choline and functions as a neurotransmitter.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by neurotransmitter","termid":"GO:0003070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by acetylcholine","synonyms":[{"name":"blood pressure regulation by acetylcholine","type":"exact"}],"termid":"GO:0003068"}


id: PBO:0080735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing E3 ubiquitin protein ligase 1","termid":"PBO:0080735"}


id: PBO:0086999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhodanese domain sulfur transferase; accepts persulfite from Nfs1p and transfers it to Uba4p in the pathway for 2-thiolation of the wobble uridine base of tRNAs; also stimulates sulfur transfer by Nfs1p; involved in metabolism of sterol esters; may be mitochondrially localized","termid":"PBO:0086999"}


id: GO:0034097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide","termid":"GO:1901652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cytokine","secondary_identifiers":["Reactome:R-HSA-9645135"],"synonyms":[{"name":"response to cytokine stimulus","type":"exact"}],"termid":"GO:0034097"}


id: PBO:0028524
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9K14_acetylation","termid":"PBO:0028524"}


id: PBO:0087411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit (17 kDa) of TFIID and SAGA complexes; involved in RNA polymerase II transcription initiation and in chromatin modification, similar to histone H3","termid":"PBO:0087411"}


id: PBO:0011464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA methyltransferase, implicated in ribosome biogenesis (predicted)","termid":"PBO:0011464"}


id: PBO:0031670
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_transport","termid":"PBO:0031670"}


id: MONDO:0019497
data:
  {"annotated_genes":["SJAG_00164","SJAG_01926","SJAG_05330","SJAG_00301","SJAG_04706","SJAG_01722","SJAG_00365","SJAG_03785","SJAG_05182","SJAG_05282","SJAG_03007","SJAG_00358","SJAG_03088","SJAG_04719","SJAG_04554","SJAG_03703","SJAG_04703","SJAG_05213","SJAG_01344","SJAG_04613","SJAG_02348","SJAG_01941","SJAG_00279","SJAG_00082","SJAG_04558","SJAG_04409","SJAG_00244","SJAG_02155","SJAG_04882","SJAG_02016","SJAG_00488","SJAG_02431","SJAG_03536","SJAG_01538","SJAG_04856","SJAG_03943","SJAG_03811","SJAG_02463","SJAG_01943","SJAG_01400","SJAG_05175","SJAG_04115","SJAG_04295","SJAG_02139","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012196"},{"annotations":[85673,85674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007424"},{"annotations":[85885,85886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011350"},{"annotations":[86189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011480"},{"annotations":[85842,85838,85839,85841,85840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011568"},{"annotations":[85615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014603"},{"annotations":[87079,87080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010915"},{"annotations":[85596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014594"},{"annotations":[85968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014853"},{"annotations":[87654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011067"},{"annotations":[86951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012091"},{"annotations":[85656,85657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010933"},{"annotations":[87089,87090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013471"},{"annotations":[87355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013386"},{"annotations":[86142,86143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014237"},{"annotations":[87058,87057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013489"},{"annotations":[85364,87592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010799"},{"annotations":[87105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027048"},{"annotations":[85689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033258"},{"annotations":[87033,87032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032911"},{"annotations":[87041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032917"},{"annotations":[85685,85686,85684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030058"},{"annotations":[86107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033668"},{"annotations":[87411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030719"},{"annotations":[86914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859524"},{"annotations":[86911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859525"},{"annotations":[87445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032740"},{"annotations":[85717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033199"},{"annotations":[86587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032639"},{"annotations":[87475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032761"},{"annotations":[87478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032762"},{"annotations":[87450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958277"},{"annotations":[87455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032749"},{"annotations":[85719,85718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010577"},{"annotations":[87507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010378"}]},"cv_name":"mondo","definition":"A disease characterized by hearing loss that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"},{"relation_name":"is_a","term_name":"inherited auditory system disease","termid":"MONDO:0037940"},{"relation_name":"is_a","term_name":"hereditary neurological 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id: PBO:0058771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6895","termid":"PBO:0058771"}


id: PBO:0113019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Benzil oxidoreductase with preference for NADPH; localizes to the cytoplasm; sequence similarity with short-chain dehydrogenase/reductases; putative paralog of IRC24","termid":"PBO:0113019"}


id: PBO:0091891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA translocase/ubiquitin protein ligase E3, human ERCC4 ortholog Rhp16/Rad16","termid":"PBO:0091891"}


id: PBO:0064289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen like A (pseudogene)","termid":"PBO:0064289"}


id: MONDO:1012551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"caudal cruciate ligament disease, non-human animal","termid":"MONDO:1011971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caudal cruciate ligament disease, dog","secondary_identifiers":["OMIA:002463-9615"],"termid":"MONDO:1012551","xrefs":{"Monarch":{"xref_id":"1012551"}}}


id: MONDO:0018533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Undifferentiated carcinoma of liver and intrahepatic biliary tract is an extremely rare epithelial tumor of the liver and biliary tract which presents heterogenous histological findings and not yet fully defined clinicopathological characteristics. Patients usually present with nonspecific signs and symptoms, such as abdominal pain, nausea, vomiting, anorexia, weight loss and/or jaundice. Invasive growth, high metastatic potential and a rapid clinical course are typically associated.","definition_xrefs":["Orphanet:424970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undifferentiated carcinoma","termid":"MONDO:0005617"},{"relation_name":"is_a","term_name":"carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"undifferentiated carcinoma of liver and intrahepatic biliary tract","secondary_identifiers":["UMLS:C4749401","MEDGEN:1656437","GARD:21788"],"synonyms":[{"name":"undifferentiated carcinoma of liver and IBT","type":"exact"}],"termid":"MONDO:0018533","xrefs":{"Monarch":{"xref_id":"0018533"}}}


id: PR:O14023
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongator complex protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11135:SF0","PRO:DNx","OMA:SCHPO02124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.20","secondary_identifiers":["UniProtKB:O14023"],"synonyms":[{"name":"Spom972h-ELP3","type":"exact"}],"termid":"PR:O14023"}


id: MONDO:0800317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 4","secondary_identifiers":["MEDGEN:336904","UMLS:C1845295"],"synonyms":[{"name":"POF4","type":"exact"}],"termid":"MONDO:0800317","xrefs":{"Monarch":{"xref_id":"0800317"}}}


id: GO:0014006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microglia differentiation, the process in which a relatively unspecialized cell acquires specialized features of a microglial cell.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage differentiation","termid":"GO:0045649"},{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"regulates","term_name":"microglia differentiation","termid":"GO:0014004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microglia differentiation","synonyms":[{"name":"regulation of microglial cell differentiation","type":"exact"}],"termid":"GO:0014006"}


id: PBO:0074765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 1C","termid":"PBO:0074765"}


id: FYPO:0002413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable and curved along the long axis in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable curved vegetative cell population (obsolete FYPO:0002413)","synonyms":[{"name":"inviable curved vegetative cell population","type":"exact"},{"name":"population of inviable curved cells","type":"exact"}],"termid":"FYPO:0002413"}


id: PBO:0071656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 20","termid":"PBO:0071656"}


id: PBO:0065565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 3 pseudogene 5","termid":"PBO:0065565"}


id: PBO:0053842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1108","termid":"PBO:0053842"}


id: SO:0001778
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant present in the embryo that is carried by every cell in the body.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germline_variant","synonyms":[{"name":"germline variant","type":"exact"}],"termid":"SO:0001778"}


id: MONDO:0003344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemangioblastoma (obsolete MONDO:0003344)","termid":"MONDO:0003344","xrefs":{"Monarch":{"xref_id":"0003344"}}}


id: PBO:0086747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; predicted member of the oligopeptide transporter (OPT) family of membrane transporters","termid":"PBO:0086747"}


id: GO:0050267
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (cis-prenyl)n-diphosphate + isopentenyl diphosphate = (cis-prenyl)(n+1)-diphosphate + diphosphate.","definition_xrefs":["RHEA:18801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"rubber cis-polyprenylcistransferase activity","secondary_identifiers":["MetaCyc:2.5.1.20-RXN","EC:2.5.1.20"],"synonyms":[{"name":"cis-prenyl transferase activity","type":"related"},{"name":"isopentenyl pyrophosphate cis-1,4-polyisoprenyl transferase activity","type":"related"},{"name":"poly-cis-polyprenyl-diphosphate:isopentenyl-diphosphate polyprenylcistransferase activity","type":"related"},{"name":"rubber allyltransferase activity","type":"related"},{"name":"rubber polymerase activity","type":"related"},{"name":"rubber prenyltransferase activity","type":"related"},{"name":"rubber transferase activity","type":"broad"}],"termid":"GO:0050267"}


id: PBO:0042299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD8 subunit alpha","termid":"PBO:0042299"}


id: PBO:0005672
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.3","termid":"PBO:0005672"}


id: PBO:0076153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SURP and G-patch domain containing 1","termid":"PBO:0076153"}


id: PR:O13781
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17G6.03 gene.","definition_xrefs":["UniProtKB:O13781","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17G6.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.03","synonyms":[{"name":"Spom972h-SPAC17G6.03","type":"exact"}],"termid":"PR:O13781"}


id: PBO:0013463
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A suppresses accumulation of septated cells, but does not restore wild-type checkpoint function, in rad3delta or rad3-36 mutant","termid":"PBO:0013463"}


id: GO:0001068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RNA region within the transcript that regulates the transcription of a gene, cistron, or operon.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory region RNA binding","termid":"GO:0001069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"transcription regulatory region RNA binding","termid":"GO:0001068"}


id: MONDO:0002460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the lacrimal apparatus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"lacrimal system cancer","secondary_identifiers":["DOID:292","NCIT:C5102","MEDGEN:272790","SCTID:416510003","UMLS:C1334361"],"synonyms":[{"name":"cancer of lacrimal apparatus","type":"exact"},{"name":"lacrimal apparatus cancer","type":"exact"},{"name":"lacrimal system neoplasm","type":"exact"},{"name":"lacrimal system neoplasms","type":"exact"},{"name":"lacrimal system tumor","type":"exact"},{"name":"lacrimal system tumour","type":"exact"},{"name":"malignant lacrimal apparatus neoplasm","type":"exact"},{"name":"malignant neoplasm of lacrimal apparatus","type":"exact"},{"name":"neoplasm of lacrimal system","type":"exact"},{"name":"neoplasm of the lacrimal system","type":"exact"},{"name":"tumor of lacrimal system","type":"exact"},{"name":"tumor of the lacrimal system","type":"exact"},{"name":"tumour of lacrimal system","type":"exact"},{"name":"tumour of the lacrimal system","type":"exact"}],"termid":"MONDO:0002460","xrefs":{"Monarch":{"xref_id":"0002460"}}}


id: GO:0035738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which an organism alters or subverts a biological process in another organism via the action of a venom. Venoms are injected into the prey by a bite or a sting. Venoms cause their biological effects via the many toxins that they contain; some venoms are complex mixtures of toxins of differing types. Venoms can serve as predation mechanisms or defense responses.","definition_xrefs":["Wikipedia:Venom"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated perturbation of biological process","synonyms":[{"name":"envenomation","type":"exact"},{"name":"envenomation perturbing biological process","type":"exact"},{"name":"envenomation resulting in modification of morphology or physiology of other organism","type":"exact"},{"name":"envenomation resulting in modulation of process in another organism","type":"exact"},{"name":"envenomation resulting in modulation of process in other organism","type":"exact"}],"termid":"GO:0035738"}


id: PBO:0051454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-52","termid":"PBO:0051454"}


id: MONDO:0005941
data:
  {"annotated_genes":["SJAG_01671","SJAG_00260","SJAG_01895"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[85966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[86174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the retroperitoneum. The vast majority of cases are carcinomas, lymphomas, or sarcomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"retroperitoneal neoplasm","termid":"MONDO:0024645"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_01895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"retroperitoneal cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0153465","MESH:D012186","DOID:5875","MEDGEN:57559","SCTID:126872008","ICD9:158.0","ICD9:158","EFO:0007466","NCIT:C3357","NCIT:C3537"],"synonyms":[{"name":"cancer of retroperitoneal space","type":"exact"},{"name":"malignant neoplasm of retroperitoneal space","type":"exact"},{"name":"malignant neoplasm of retroperitoneum","type":"related"},{"name":"malignant neoplasm of retroperitoneum and peritoneum","type":"exact"},{"name":"malignant retroperitoneal cancer","type":"related"},{"name":"malignant retroperitoneal neoplasm","type":"exact"},{"name":"malignant retroperitoneal space neoplasm","type":"exact"},{"name":"malignant tumor of peritoneum and retroperitoneum","type":"exact"},{"name":"malignant tumour of peritoneum and retroperitoneum","type":"exact"},{"name":"neoplasm of retroperitoneum","type":"broad"},{"name":"neoplasm of the retroperitoneum","type":"broad"},{"name":"retroperitoneal neoplasm","type":"broad"},{"name":"retroperitoneal space cancer","type":"exact"},{"name":"tumor of retroperitoneum","type":"broad"},{"name":"tumour of retroperitoneum","type":"broad"}],"termid":"MONDO:0005941","terms_by_termid":{"MONDO:0007273":null,"MONDO:0011121":null,"MONDO:0013602":null},"xrefs":{"Monarch":{"xref_id":"0005941"}}}


id: GO:0100066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates induction of conjugation with cellular fusion.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of induction of conjugation with cellular fusion by transcription from RNA polymerase II promoter (obsolete GO:0100066)","termid":"GO:0100066"}


id: PBO:0084774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein, ERMES complex subunit; required for transmission of mitochondria to daughter cells; required for mitophagy; may influence import and assembly of outer membrane beta-barrel proteins; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0084774"}


id: MOD:01060
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carboxamidomethyl-L-cysteine.","definition_xrefs":["PubMed:11510821","DeltaMass:196","PubMed:10504701","DeltaMass:337","PubMed:18306178","OMSSA:3","PubMed:12422359","Unimod:4#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetamide derivatized residue","termid":"MOD:00397"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-carboxamidomethyl-L-cysteine","synonyms":[{"name":"CamC","type":"exact"},{"name":"CamCys","type":"exact"},{"name":"Carbamidomethyl","type":"related"},{"name":"Carboxamidomethyl (on Cysteine)","type":"exact"},{"name":"Carboxyamidomethyl Cystenyl","type":"exact"},{"name":"Iodoacetamide derivative","type":"related"},{"name":"S-carbamoylmethyl-L-cysteine","type":"exact"},{"name":"amidocarboxymethylcysteine","type":"exact"},{"name":"carbamidomethylc","type":"exact"},{"name":"carbamoylmethylcysteine","type":"exact"}],"termid":"MOD:01060"}


id: PBO:0082138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of anaphase-promoting complex/cyclosome (APC/C); antagonist of the spindle assembly checkpoint; directs ubiquitination of cyclins resulting in mitotic exit; targets the APC/C to specific substrates including: Cdc20p, Ase1p, Cin8p, Fin1p and Clb5p; partially active in metaphase, and fully active in anaphase; cell-cycle regulated","termid":"PBO:0082138"}


id: GO:0047701
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a beta-L-arabinoside = L-arabinose + an alcohol.","definition_xrefs":["EC:3.2.1.88"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"beta-L-arabinosidase activity","secondary_identifiers":["MetaCyc:BETA-L-ARABINOSIDASE-RXN"],"synonyms":[{"name":"b-L-arabinosidase activity","type":"exact"},{"name":"beta-L-arabinoside arabinohydrolase activity","type":"related"},{"name":"vicianosidase activity","type":"related"}],"termid":"GO:0047701"}


id: FYPO:0009089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of sodium chloride and sodium dodecyl sulfate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to sodium chloride and sodium dodecyl sulfate","synonyms":[{"name":"resistance to sodium chloride and SDS","type":"exact"},{"name":"resistance to sodium chloride and SDS during vegetative growth","type":"exact"},{"name":"resistance to sodium chloride and SDS in combination","type":"exact"},{"name":"resistance to sodium chloride and sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to sodium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to sodium chloride and sodium dodecyl sulfate in combination","type":"exact"},{"name":"resistant to sodium chloride and SDS","type":"exact"},{"name":"resistant to sodium chloride and sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0009089"}


id: PBO:0068685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 66, pseudogene","termid":"PBO:0068685"}


id: FYPO:0003995
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA primase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abnormal DNA primase activity","termid":"FYPO:0003995"}


id: PBO:0052663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 31","termid":"PBO:0052663"}


id: FYPO:0006088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is normal (i.e. indistinguishable from wild type) during a cellular response to DNA damage. The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA binding during cellular response to DNA damage","synonyms":[{"name":"normal DNA binding in response to DNA damage","type":"related"}],"termid":"FYPO:0006088"}


id: GO:0000124
data:
  {"annotated_genes":["SJAG_03599","SJAG_02541","SJAG_04205","SJAG_00641","SJAG_03668","SJAG_03752","SJAG_01711","SJAG_00584","SJAG_04274","SJAG_02773","SJAG_02458","SJAG_02066","SJAG_02927","SJAG_00184","SJAG_00087","SJAG_04613","SJAG_01475","SJAG_03776","SJAG_01658"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58074,62184,63261,66700,71288,71988,73673,74176,74272,75964,77059,77484,79258,88812,91735,103705,112124,116670,117955],"is_not":false,"summary":null,"term":"GO:0000124"}]},"cv_name":"cellular_component","definition":"A SAGA-type histone acetyltransferase complex that deubiquitinates H2A and/or H2B. This complex is organized into several functional submodules: a structural core including the activator binding module and consisting of ADA1 or a homolog, members of the SPT and TAF protein families as well as promotor recruitment factor TRRAP/TRA1, a histone acetyltransferase (HAT) module consisting of GCN5/KAT2A or PCAF/KAT2B, ADA2, ADA3/NGG1, and SGF29 or homologues thereof, a histone deubiquitinase (DUB) module consisting of ATXN7/SGF73, ATXN7L3/SGF11, ENY2/SUS1 and USP22/UBP8 or homologues thereof, and in some taxa a splicing module consisting of SF3B3 and SF3B5 or homologues thereof (not in fungi). In budding yeast also contains Spt8 which distinguishes it from SAGA-like (SLIK) complex (GO:0046695).","definition_xrefs":["PMID:19056896","PMID:20838651","PMID:10637607","PMID:17337012","PMID:33004486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"},{"relation_name":"is_a","term_name":"peptidase complex","termid":"GO:1905368"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00184":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_02066":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02773":null,"SJAG_02927":null,"SJAG_03599":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"SAGA complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030914","GO:0000125"],"synonyms":[{"name":"PCAF complex","type":"narrow"},{"name":"PCAF histone acetylase-associated complex","type":"narrow"},{"name":"SPT3-TAF9-GCN5 acetylase complex","type":"related"},{"name":"SPT3-TAF9-PCAF acetylase complex","type":"narrow"},{"name":"STAGA coactivator complex","type":"related"},{"name":"STAGA complex","type":"related"},{"name":"Spt-Ada-Gcn5-acetyltransferase complex","type":"exact"}],"termid":"GO:0000124","terms_by_termid":{"GO:0000124":null}}


id: PBO:0035820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_mannosylinositol_phosphorylceramide_level","termid":"PBO:0035820"}


id: MONDO:0019491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare intellectual disability.","gene_count":0,"genotype_count":0,"name":"obsolete rare intellectual disability (obsolete MONDO:0019491)","secondary_identifiers":["Orphanet:87277"],"synonyms":[{"name":"rare intellectual disability","type":"exact"}],"termid":"MONDO:0019491","xrefs":{"Monarch":{"xref_id":"0019491"}}}


id: GO:0035997
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a microvillus of a rhabdomere.","definition_xrefs":["GOC:sart","GOC:bf","PMID:14744998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvillus membrane","termid":"GO:0031528"},{"relation_name":"part_of","term_name":"rhabdomere membrane","termid":"GO:0033583"},{"relation_name":"part_of","term_name":"rhabdomere microvillus","termid":"GO:0035996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"rhabdomere microvillus membrane","termid":"GO:0035997"}


id: PBO:0084163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved iron-sulfur cluster binding protein; localized in the cytoplasm; forms a complex with Nbp35p that is involved in iron-sulfur protein assembly in the cytosol","termid":"PBO:0084163"}


id: GO:0047906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (24R,24'R)-fucosterol epoxide = acetaldehyde + desmosterol.","definition_xrefs":["EC:4.1.2.33","RHEA:10884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"fucosterol-epoxide lyase activity","secondary_identifiers":["KEGG_REACTION:R03723","MetaCyc:FUCOSTEROL-EPOXIDE-LYASE-RXN"],"synonyms":[{"name":"(24R,24'R)-fucosterol-epoxide acetaldehyde-lyase (desmosterol-forming)","type":"related"},{"name":"(24R,24'R)-fucosterol-epoxide acetaldehyde-lyase activity","type":"related"}],"termid":"GO:0047906"}


id: MONDO:0958346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare dysraphic abnormality characterized by the infiltration of fatty tissue localized in the filum terminale, with abnormal conus shape. The spinal cord is typically attenuated and the limit between its end and the fatty filum is hard to distinguish. There are no additional spinal cord malformation, but it can be associated with vertebral abnormalities, anorectal malformation or other syndromic condition. It is named transitional for its intermediate image between an isolated filum lipoma and a terminal conus region lipoma.","definition_xrefs":["Orphanet:645322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysraphic spinal cord lipoma","termid":"MONDO:0958260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated transitional filum lipoma","secondary_identifiers":["UMLS:C5816722","MEDGEN:1853141"],"termid":"MONDO:0958346","xrefs":{"Monarch":{"xref_id":"0958346"}}}


id: MONDO:0016865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Kleefstra syndrome","termid":"MONDO:0012455"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kleefstra syndrome due to a point mutation","secondary_identifiers":["UMLS:C5680724","Orphanet:261652","GARD:17253","MEDGEN:1826146"],"termid":"MONDO:0016865","xrefs":{"Monarch":{"xref_id":"0016865"}}}


id: FYPO:0003306
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the mitotic index is lower than normal. The mitotic index is the proportion of the population undergoing mitosis at any given time.","definition_xrefs":["PMID:11683392","PMID:22684255","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitotic index","synonyms":[{"name":"reduced mitotic index","type":"exact"}],"termid":"FYPO:0003306"}


id: GO:2000694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phragmoplast microtubule organization.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"phragmoplast microtubule organization","termid":"GO:0080175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"regulation of phragmoplast microtubule organization","synonyms":[{"name":"regulation of phragmoplast microtubule cytoskeleton organization","type":"exact"},{"name":"regulation of phragmoplast microtubule organisation","type":"exact"}],"termid":"GO:2000694"}


id: GO:0072476
data:
  {"annotated_genes":["SJAG_00082","SJAG_04140","SJAG_01837","SJAG_01805","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94135,117068,90324,111578,102722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic cell cycle spindle checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle checkpoint signaling","termid":"GO:0072414"},{"relation_name":"is_a","term_name":"response to spindle checkpoint signaling","termid":"GO:0072417"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic spindle checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic cell cycle spindle checkpoint effector process","type":"exact"},{"name":"response to mitotic cell cycle spindle checkpoint signaling","type":"exact"},{"name":"response to signal involved in mitotic cell cycle spindle checkpoint","type":"exact"}],"termid":"GO:0072476","terms_by_termid":{"GO:0140429":null}}


id: GO:0034106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of erythrocyte clearance.","definition_xrefs":["PMID:12905029","GOC:add","PMID:14754397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"regulates","term_name":"erythrocyte clearance","termid":"GO:0034102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of erythrocyte clearance","synonyms":[{"name":"regulation of RBC clearance","type":"exact"},{"name":"regulation of neocytolysis","type":"narrow"},{"name":"regulation of red blood cell clearance","type":"exact"}],"termid":"GO:0034106"}


id: MONDO:0015524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperplastic polyposis syndrome is a rare, genetic intestinal disease characterized by the presence of multiple (usually large) hyperplastic/serrated colorectal polyps, usually with a pancolonic distribution. Histology reveals hyperplastic polyps, sessile serrated adenomas (most common), traditional serrated adenomas or mixed polyps. It is associated with an increased personal and familial (first-degree relatives) risk of colorectal cancer.","definition_xrefs":["Orphanet:157798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"hyperplastic polyposis syndrome","secondary_identifiers":["GARD:16982","NCIT:C165469","UMLS:C4296896","icd11.foundation:1344352020","MEDGEN:1645454","SCTID:763536006"],"synonyms":[{"name":"serrated polyposis","type":"exact"}],"termid":"MONDO:0015524","xrefs":{"Monarch":{"xref_id":"0015524"}}}


id: PBO:0017881
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"itsy bitsy phosphatase","termid":"PBO:0017881"}


id: PBO:0073567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shiftless antiviral inhibitor of ribosomal frameshifting","termid":"PBO:0073567"}


id: GO:0102997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + progesterone + NADPH = 5beta-pregnane-3,20-dione + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete progesterone 5beta- reductase activity (obsolete GO:0102997)","termid":"GO:0102997"}


id: GO:0050832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to fungus","termid":"GO:0009620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to fungus","secondary_identifiers":["GO:0009817","GO:0042831","GO:0009623"],"synonyms":[{"name":"defence response to fungi","type":"exact"},{"name":"defence response to fungus","type":"exact"},{"name":"defense response to fungi","type":"exact"},{"name":"defense response to fungus, incompatible interaction","type":"narrow"},{"name":"resistance response to pathogenic fungi","type":"narrow"},{"name":"resistance response to pathogenic fungus","type":"narrow"},{"name":"response to parasitic fungi","type":"narrow"},{"name":"response to parasitic fungus","type":"narrow"}],"termid":"GO:0050832"}


id: PBO:0071248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 89","termid":"PBO:0071248"}


id: PBO:0073887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 12 member 4","termid":"PBO:0073887"}


id: MONDO:0013599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune enteropathy and endocrinopathy-susceptibility to chronic infections syndrome is an extremely rare, autosomal dominant immunological disorder characterized by variable enteropathy, endocrine disorders (e.g. type 1 diabetes mellitus, hypothyroidism), immune dysregulation with pulmonary and blood-borne bacterial infections, and fungal infections (chronic mucocutaneous candidiasis) developing in infancy. Other manifestations include short stature, eczema, hepatosplenomegaly, delayed puberty, and osteoporosis/osteopenia.","definition_xrefs":["Orphanet:391487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of endocrine system","termid":"MONDO:0000569"},{"relation_name":"is_a","term_name":"polyendocrinopathy","termid":"MONDO:0015126"},{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"},{"relation_name":"is_a","term_name":"autoimmune enteropathy","termid":"MONDO:0019787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"autoimmune enteropathy and endocrinopathy - susceptibility to chronic infections syndrome","secondary_identifiers":["MEDGEN:481620","UMLS:C3279990","GARD:12314","DOID:0111946","OMIM:614162"],"synonyms":[{"name":"CANDF7","type":"related"},{"name":"IMD31C","type":"related"},{"name":"candidiasis familial chronic mucocutaneous, autosomal dominant","type":"related"},{"name":"candidiasis familial, 7","type":"related"},{"name":"candidiasis, familial chronic mucocutaneous, autosomal dominant","type":"related"},{"name":"candidiasis, familial, 7","type":"related"},{"name":"familial chronic mucocutaneous, autosomal dominant","type":"related"},{"name":"immunodeficiency 31C","type":"related"},{"name":"immunodeficiency 31C, chronic mucocutaneous candidiasis, autosomal dominant","type":"exact"},{"name":"immunodeficiency type 31C","type":"exact"}],"termid":"MONDO:0013599","xrefs":{"Monarch":{"xref_id":"0013599"}}}


id: GO:0160242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycerol) + NAD+ = a 1,2-diacyl-sn-glycero-3-phospho-(1'-sn-glycerone) + NADH + H+.","definition_xrefs":["PMID:26338420","RHEA:81099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phosphatidylglycerol dehydrogenase (NAD+) activity","termid":"GO:0160242"}


id: PBO:0069675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 952, pseudogene","termid":"PBO:0069675"}


id: MONDO:0009903
data:
  {"annotated_genes":["SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85737],"is_not":false,"summary":null,"term":"MONDO:0009903"}]},"cv_name":"mondo","definition":"Postaxial acrofacial dysostosis (POADS) is a type of acrofacial dysostosis characterized by mandibular and malar hypoplasia, small and cup-shaped ears, lower lid ectropion, and symmetrical postaxial limb deficiencies with absence of the fifth digital ray and ulnar hypoplasia.","definition_xrefs":["Orphanet:246"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"postaxial acrofacial dysostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:759.89","MESH:C537680","DOID:0111259","SCTID:66038001","GARD:8410","icd11.foundation:70602060","OMIM:263750","MEDGEN:120522","UMLS:C0265257"],"synonyms":[{"name":"GWAFD","type":"related"},{"name":"Genee-Wiedemann acrofacial dysostosis","type":"related"},{"name":"Genee-Wiedemann syndrome","type":"related"},{"name":"Mandibulfacial dysostosis with postaxial limb anomalies","type":"exact"},{"name":"Miller Syndrome","type":"exact"},{"name":"Miller syndrome","type":"exact"},{"name":"POADS","type":"exact"},{"name":"POADS syndrome","type":"related"},{"name":"Wildervanck-Smith syndrome","type":"related"},{"name":"acrofacial dysostosis, Genee-Wiedmann type","type":"exact"},{"name":"postaxial acrodysostosis","type":"exact"},{"name":"postaxial acrofacial dysostosis","type":"exact"},{"name":"postaxial acrofacial dysostosis (POADS) syndrome","type":"related"}],"termid":"MONDO:0009903","terms_by_termid":{"MONDO:0009903":null},"xrefs":{"Monarch":{"xref_id":"0009903"}}}


id: FYPO:0008404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the degradation a protein which is normally degraded during meiosis does not occur. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation","termid":"FYPO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein degradation during meiosis","termid":"FYPO:0008404"}


id: FYPO:0001638
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-alanine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular alanine level","synonyms":[{"name":"normal cellular L-alanine level","type":"exact"},{"name":"normal cellular alanine level during mitotic cell cycle","type":"related"},{"name":"normal cellular alanine level during vegetative growth","type":"exact"},{"name":"normal level of alanine in cell","type":"exact"}],"termid":"FYPO:0001638"}


id: GO:0071142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of a single type of SMAD family proteins. In the absence of Smad4, phosphorylation of R-SMADs results in their homotrimerization. However, these complexes do not appear to import into the nucleus and are assumed to be transcriptionally inactive.","definition_xrefs":["GOC:mah","PMID:16322555","PMID:9670020","PMID:11779505","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMAD protein complex","termid":"GO:0071141"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"homomeric SMAD protein complex","secondary_identifiers":["GO:0071143"],"synonyms":[{"name":"SMAD1 homotrimer complex","type":"narrow"},{"name":"SMAD1 protein complex","type":"narrow"},{"name":"SMAD2 homotrimer complex","type":"narrow"},{"name":"SMAD2 protein complex","type":"narrow"},{"name":"SMAD3 homotrimer complex","type":"narrow"},{"name":"SMAD3 protein complex","type":"narrow"}],"termid":"GO:0071142"}


id: PBO:0059191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRGPRF antisense RNA 1","termid":"PBO:0059191"}


id: PBO:0072210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 9","termid":"PBO:0072210"}


id: PR:Q9Y7Z7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp15 gene.","definition_xrefs":["UniProtKB:Q9Y7Z7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L15, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.01c","synonyms":[{"name":"Spom972h-mrp15","type":"exact"}],"termid":"PR:Q9Y7Z7"}


id: PBO:0062105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 3","termid":"PBO:0062105"}


id: GO:2000128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of octopamine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of octopamine or tyramine signaling pathway","termid":"GO:2000125"},{"relation_name":"regulates","term_name":"octopamine signaling pathway","termid":"GO:0071927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of octopamine signaling pathway","synonyms":[{"name":"regulation of octopamine signalling pathway","type":"exact"}],"termid":"GO:2000128"}


id: MONDO:0011201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"essential tremor","termid":"MONDO:0003233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, hereditary essential, 2","secondary_identifiers":["DOID:0111429","MEDGEN:356087","OMIM:602134","MESH:C536546","UMLS:C1865810"],"synonyms":[{"name":"ETM2","type":"exact"},{"name":"essential tremor, hereditary, 2","type":"exact"},{"name":"tremor hereditary essential, 2","type":"related"},{"name":"tremor, hereditary essential, 2","type":"exact"}],"termid":"MONDO:0011201","xrefs":{"Monarch":{"xref_id":"0011201"}}}


id: MONDO:0018616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central serous chorioretinopathy is a disease that causes fluid to build up under the retina, the back part of the inner eye that sends sight information to the brain. The fluid leaks from thechoroid (theblood vessel layer under the retina). The cause of this condition is unknown but stress can be a risk factor. Signs and symptoms include dim and blurred blind spot in the center of vision, distortion of straight linesand seeingobjectsas smaller or farther away. Many cases of central serous chorioretinopathy improve without treatment after 1-2 months. Laser treatment may be an option for other individuals.","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"central serous chorioretinopathy","secondary_identifiers":["Orphanet:443079","UMLS:C0730328","MEDGEN:147591","ICD9:362.41","MESH:D056833","SCTID:312956001","icd11.foundation:1623925689","NCIT:C115124","GARD:200"],"synonyms":[{"name":"CSC","type":"exact"},{"name":"CSCR","type":"exact"},{"name":"central serous chorioretinopathy after bone marrow transplantation","type":"related"},{"name":"central serous choroidopathy","type":"related"},{"name":"central serous retinopathy","type":"exact"}],"termid":"MONDO:0018616","xrefs":{"Monarch":{"xref_id":"0018616"}}}


id: GO:0009356
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that possesses 4-amino-4-deoxychorismate synthase activity.","definition_xrefs":["PMID:2251281","PMID:7592344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"aminodeoxychorismate synthase complex","synonyms":[{"name":"4-amino-4-deoxychorismate synthase complex","type":"related"},{"name":"ADC synthase complex","type":"exact"},{"name":"p-aminobenzoate synthetase complex","type":"related"}],"termid":"GO:0009356"}


id: PATO:0001110
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001110 absolute density value (obsolete PATO:0001110)","termid":"PATO:0001110"}


id: GO:0032638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-9 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-9 production","secondary_identifiers":["GO:0042229","GO:0072607"],"synonyms":[{"name":"IL-9 production","type":"exact"},{"name":"interleukin-9 biosynthetic process","type":"narrow"},{"name":"interleukin-9 secretion","type":"narrow"}],"termid":"GO:0032638"}


id: MONDO:0032822
data:
  {"annotated_genes":["SJAG_05327"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87335],"is_not":false,"summary":null,"term":"MONDO:0032822"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05327":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0002525","MONDO:0700092","MONDO:0005066","MONDO:0024322","MONDO:0002320"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 80","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5231418","DOID:0112216","OMIM:618580","MEDGEN:1684779"],"synonyms":[{"name":"DEE80","type":"exact"},{"name":"EIEE80","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 80","type":"exact"},{"name":"Glycosylphosphatidylinositol Biosynthesis Defect 20","type":"related"},{"name":"developmental and epileptic encephalopathy 80","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 80","type":"exact"}],"termid":"MONDO:0032822","terms_by_termid":{"MONDO:0032822":null},"xrefs":{"Monarch":{"xref_id":"0032822"}}}


id: PBO:0089204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial heat shock protein Hsp10","termid":"PBO:0089204"}


id: GO:0043691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peripheral cell cholesterol, cholest-5-en-3-beta-ol, towards the liver for catabolism.","definition_xrefs":["GOC:ecd","PMID:7751809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"reverse cholesterol transport","termid":"GO:0043691"}


id: SO:0001111
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A beta strand describes a single length of polypeptide chain that forms part of a beta sheet. A single continuous stretch of amino acids adopting an extended conformation of hydrogen bonds between the N-O and the C=O of another part of the peptide. This forms a secondary protein structure in which two or more extended polypeptide regions are hydrogen-bonded to one another in a planar array.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_strand","secondary_identifiers":["BS:00042","http://en.wikipedia.org/wiki/Beta_sheet"],"synonyms":[{"name":"strand","type":"related"}],"termid":"SO:0001111"}


id: PBO:0027802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_JM335","termid":"PBO:0027802"}


id: GO:0045910
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA recombination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"negatively_regulates","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"negative regulation of DNA recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of DNA recombination","type":"exact"},{"name":"down-regulation of DNA recombination","type":"exact"},{"name":"downregulation of DNA recombination","type":"exact"},{"name":"inhibition of DNA recombination","type":"narrow"}],"termid":"GO:0045910","terms_by_termid":{"GO:0045128":null}}


id: PBO:0058797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7703","termid":"PBO:0058797"}


id: MONDO:0019054
data:
  {"annotated_genes":["SJAG_00112","SJAG_02556","SJAG_00414","SJAG_00183","SJAG_02701","SJAG_00853","SJAG_02200","SJAG_01213","SJAG_03703","SJAG_05194","SJAG_01852","SJAG_00504","SJAG_03506","SJAG_03847","SJAG_01831","SJAG_02708","SJAG_04975","SJAG_03106","SJAG_00068","SJAG_05180","SJAG_02339","SJAG_00611","SJAG_03484","SJAG_03144","SJAG_00197","SJAG_06383","SJAG_03379","SJAG_01067","SJAG_05019","SJAG_00295","SJAG_00796","SJAG_01410","SJAG_02096","SJAG_00875","SJAG_02431","SJAG_04995","SJAG_01863","SJAG_00773","SJAG_04092","SJAG_01665","SJAG_04697","SJAG_01065"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014651"},{"annotations":[86473,86474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013895"},{"annotations":[85397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012282"},{"annotations":[87025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032903"},{"annotations":[86858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030281"},{"annotations":[86030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030847"},{"annotations":[87459,87458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032751"},{"annotations":[86865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008822"},{"annotations":[86151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014248"},{"annotations":[86649,86648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012137"},{"annotations":[87465,87466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008338"},{"annotations":[87491,87490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020746"},{"annotations":[85879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007387"},{"annotations":[87361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010370"},{"annotations":[86019],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012555"},{"annotations":[86477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013864"},{"annotations":[86584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957921"},{"annotations":[86650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013248"},{"annotations":[87074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013499"},{"annotations":[85358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014108"},{"annotations":[87329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014986"},{"annotations":[87333],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014987"},{"annotations":[87330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014985"},{"annotations":[86460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100104"},{"annotations":[87505,87504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008675"},{"annotations":[86656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009398"},{"annotations":[86495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013882"},{"annotations":[86921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014318"},{"annotations":[87199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014457"},{"annotations":[86103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014780"},{"annotations":[87349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010532"},{"annotations":[86309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012750"},{"annotations":[86514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009670"},{"annotations":[85818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012656"},{"annotations":[85759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014552"},{"annotations":[86307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012516"},{"annotations":[85514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007943"},{"annotations":[85737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009903"},{"annotations":[85897,85896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009955"},{"annotations":[86141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014806"},{"annotations":[86140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014807"},{"annotations":[87066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010408"},{"annotations":[85962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014848"},{"annotations":[87416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"},{"annotations":[860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malformation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:68378"],"synonyms":[{"name":"congenital limb 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id: MONDO:0030318
data:
  {"annotated_genes":["SJAG_03393","SJAG_04533"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86658,86659],"is_not":false,"summary":null,"term":"MONDO:0030318"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03393":null,"SJAG_04533":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 30","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070411","UMLS:C5543620","OMIM:619405","MEDGEN:1778853"],"synonyms":[{"name":"SCAR30","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 30","type":"exact"}],"termid":"MONDO:0030318","terms_by_termid":{"MONDO:0030318":null},"xrefs":{"Monarch":{"xref_id":"0030318"}}}


id: GO:1901960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isobutanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","PMID:22224870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"isobutanol metabolic process","synonyms":[{"name":"isobutanol metabolism","type":"exact"}],"termid":"GO:1901960"}


id: _global:produced_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a produced_by b iff some process that occurs_in b has_output a.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"produced_by","secondary_identifiers":["RO:0003001"],"termid":"_global:produced_by"}


id: MONDO:0006109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from mesothelial cells in the pleura. It is characterized by the presence of neoplastic epithelioid cells and sarcomatoid features.","definition_xrefs":["NCIT:C4282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mesothelioma","termid":"MONDO:0006292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant biphasic mesothelioma","secondary_identifiers":["EFO:1000124","ICDO:9053/3","DOID:4486","MEDGEN:137775","UMLS:C0334515"],"synonyms":[{"name":"biphasic mesothelioma","type":"exact"},{"name":"malignant biphasic mesothelioma","type":"exact"},{"name":"malignant biphasic mesothelioma, malignant","type":"exact"},{"name":"malignant mixed mesothelioma","type":"exact"},{"name":"mesothelioma, biphasic, malignant","type":"exact"},{"name":"mesothelioma, biphasic, malignant (morphologic abnormality)","type":"exact"},{"name":"mixed mesothelioma","type":"exact"}],"termid":"MONDO:0006109","xrefs":{"Monarch":{"xref_id":"0006109"}}}


id: PBO:0078294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRD antisense RNA 1","termid":"PBO:0078294"}


id: MONDO:0021038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of malignant tumors, affecting mostly males under age 20, characterized morphologically by the presence of small round cells. Ewing sarcoma and peripheral primitive neuroectodermal tumor represent the ends of a spectrum, with Ewing sarcoma lacking evidence of neural differentiation and the markers that characterize the peripheral primitive neuroectodermal tumor. Ewing sarcoma and peripheral primitive neuroectodermal tumor may share cytogenetic abnormalities, proto-oncogene expression, cell culture and immunohistochemical abnormalities. These tumors may occur in the soft tissues or the bones. Pain and the presence of a mass are the most common clinical symptoms.","definition_xrefs":["NCIT:C27291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonal neoplasm","termid":"MONDO:0005564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ewing sarcoma/peripheral primitive neuroectodermal tumor","secondary_identifiers":["MEDGEN:760735","UMLS:C3536893"],"synonyms":[{"name":"EFTs","type":"exact"},{"name":"Ewing family of tumors","type":"exact"},{"name":"Ewing family of tumours","type":"exact"},{"name":"Ewing sarcoma family of tumors","type":"exact"},{"name":"Ewing sarcoma family of tumours","type":"exact"},{"name":"Ewing sarcoma/peripheral PNET","type":"exact"},{"name":"Ewing sarcoma/peripheral primitive neuroectodermal tumor","type":"exact"},{"name":"Ewing's family of tumors","type":"exact"},{"name":"Ewing's family of tumours","type":"exact"},{"name":"Ewing's sarcoma/peripheral primitive neuroectodermal tumor","type":"exact"},{"name":"Ewing's sarcoma/peripheral primitive neuroectodermal tumour","type":"exact"},{"name":"tumors of Ewing's family","type":"exact"},{"name":"tumors of the Ewing's family","type":"exact"},{"name":"tumours of Ewing's family","type":"exact"},{"name":"tumours of the Ewing's family","type":"exact"}],"termid":"MONDO:0021038","xrefs":{"Monarch":{"xref_id":"0021038"}}}


id: PATO:0000288
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000288 relative litter size (obsolete PATO:0000288)","termid":"PATO:0000288"}


id: GO:0035262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the gonads are generated and organized. A gonad is an animal organ producing gametes, e.g. the testes or the ovary in mammals.","definition_xrefs":["ISBN:0198612001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"gonad development","termid":"GO:0008406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gonad morphogenesis","termid":"GO:0035262"}


id: GO:0004150
data:
  {"annotated_genes":["SJAG_00815"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69357],"is_not":false,"summary":null,"term":"GO:0004150"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-dihydropteridine = 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + glycolaldehyde.","definition_xrefs":["EC:4.1.2.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"dihydroneopterin aldolase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["MetaCyc:H2NEOPTERINALDOL-RXN","RHEA:10540"],"synonyms":[{"name":"2-amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-dihydropteridine glycolaldehyde-lyase (2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine-forming)","type":"related"},{"name":"2-amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-dihydropteridine glycolaldehyde-lyase activity","type":"related"}],"termid":"GO:0004150","terms_by_termid":{"GO:0004150":null}}


id: GO:1902935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a septin ring.","definition_xrefs":["GO_REF:0000087","PMID:16325501","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cytoskeleton","termid":"GO:0044380"},{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to septin ring","synonyms":[{"name":"protein localisation in septin ring","type":"exact"},{"name":"protein localisation to septin ring","type":"exact"},{"name":"protein localization in septin ring","type":"exact"}],"termid":"GO:1902935"}


id: GO:0106333
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Comprised of at least NLRP5, OOEP, TLE6, and KHDC3/KHDC3L with evidence of additional SCMC-associated proteins that interact with one or multiple members of the core complex.","definition_xrefs":["PMID:28992324","PMID:18804437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"subcortical maternal complex","synonyms":[{"name":"SCMC","type":"related"}],"termid":"GO:0106333"}


id: MONDO:0020593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign hair follicle neoplasm with trichoblastic differentiation. It usually presents as a solitary papular lesion It most often presents on the head and neck area, but it may develop in any anatomic site containing hair follicles. Because of its benign nature, treatment usually is not required, provided that the diagnosis has been established with certainty.","definition_xrefs":["NCIT:C27132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign epithelial skin neoplasm","termid":"MONDO:0024666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichoblastoma","secondary_identifiers":["ICDO:8100/0","MEDGEN:138112","icd11.foundation:1414797713","UMLS:C0349658"],"synonyms":[{"name":"Brooke's tumor","type":"exact"},{"name":"Brooke's tumour","type":"exact"},{"name":"trichoblastoma","type":"exact"},{"name":"trichoepithelioma","type":"exact"},{"name":"trichoepithelioma, benign","type":"exact"},{"name":"trichogenic adnexal tumor","type":"exact"},{"name":"trichogenic adnexal tumour","type":"exact"},{"name":"trichogenic trichoblastoma","type":"exact"}],"termid":"MONDO:0020593","xrefs":{"Monarch":{"xref_id":"0020593"}}}


id: GO:2000358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of kidney smooth muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of smooth muscle cell differentiation","termid":"GO:0051152"},{"relation_name":"is_a","term_name":"regulation of kidney smooth muscle cell differentiation","termid":"GO:2000356"},{"relation_name":"positively_regulates","term_name":"kidney smooth muscle cell differentiation","termid":"GO:0072195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of kidney smooth muscle cell differentiation","termid":"GO:2000358"}


id: PBO:0071567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 33","termid":"PBO:0071567"}


id: PBO:0053088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 1F","termid":"PBO:0053088"}


id: MONDO:0016301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenitally corrected transposition (CCT) of the great vessels is a rare cardiac malformation characterized by the combination of discordant atrioventricular and ventriculo-arterial connections, usually accompanied by other cardiovascular malformations.","definition_xrefs":["Orphanet:216694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposition of the great arteries","termid":"MONDO:0000153"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenitally corrected transposition of the great arteries","secondary_identifiers":["NANDO:1200701","MESH:D000080041","icd11.foundation:254915185","MEDGEN:87489","GARD:1544","NANDO:1200699","NANDO:1200703","SCTID:83799000","MedDRA:10011120","NANDO:2100079","NANDO:2200259","ICD9:745.12","NCIT:C98902","UMLS:C0344616"],"synonyms":[{"name":"Double discordance","type":"exact"},{"name":"L-transposition of the great arteries","type":"exact"},{"name":"L-transposition of the great vessels","type":"exact"},{"name":"congenitally corrected transposition of the great vessels","type":"exact"},{"name":"discordant ventriculoarterial and atrioventricular connections","type":"exact"},{"name":"levo-transposition of the great arteries","type":"exact"},{"name":"levo-transposition of the great vessels","type":"exact"},{"name":"transposition of the great arteries, congenitally corrected","type":"related"},{"name":"transposition of the great vessels, congenitally corrected","type":"related"},{"name":"ventricular inversion","type":"exact"},{"name":"ventriculoarterial and atrioventricular discordance","type":"exact"}],"termid":"MONDO:0016301","xrefs":{"Monarch":{"xref_id":"0016301"}}}


id: MONDO:0011719
data:
  {"annotated_genes":["SJAG_03920","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87138,87139],"is_not":false,"summary":null,"term":"MONDO:0011719"}]},"cv_name":"mondo","definition":"Gastrointestinal stromal tumor (GIST) is the most common mesenchymal neoplasm of the gastrointestinal (GI) tract, typically presenting in adults over the age of 40 (mean age 63), and only rarely in children, in various regions of the GI tract, most commonly the stomach or small intestine but also less commonly in the esophagus, appendix, rectum and colon. GISTs can be asymptomatic or present with various non-specific signs, depending on the location and size of tumor, such as loss of appetite, anemia, weight loss, fatigue, abdominal discomfort or fullness, nausea, vomiting, as well as an abdominal mass, blood in stool, and intestinal obstruction. GISTs can also be seen in familial syndromes such as Carney triad and neurofibromatosis type 1.","definition_xrefs":["Orphanet:44890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"mesenchymal tumor of small intestine","termid":"MONDO:0018506"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_03920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastrointestinal stromal tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:606764","DOID:9253","MedDRA:10051066","UMLS:C0238198","ICDO:8936/1","MEDGEN:116049","NCIT:C3868","ONCOTREE:GIST","NORD:1174","SCTID:420120006","GARD:8598","MESH:D046152"],"synonyms":[{"name":"GANT","type":"exact"},{"name":"GIST","type":"exact"},{"name":"Gastrointestinal Stromal Tumors","type":"exact"},{"name":"gant","type":"exact"},{"name":"gastrointestinal stromal neoplasm","type":"exact"},{"name":"gastrointestinal stromal sarcoma","type":"exact"},{"name":"gastrointestinal stromal tumor","type":"exact"},{"name":"gastrointestinal stromal tumor (gist)","type":"exact"},{"name":"gastrointestinal stromal tumor, familial, isolated cases","type":"exact"},{"name":"gastrointestinal stromal tumor, isolated cases","type":"exact"},{"name":"gastrointestinal stromal tumors","type":"related"},{"name":"gastrointestinal stromal tumour (gist)","type":"exact"},{"name":"gastrointestinal stromal tumours","type":"related"},{"name":"gist","type":"exact"},{"name":"stromal tumor of gastrointestinal tract","type":"exact"},{"name":"stromal tumour of gastrointestinal tract","type":"exact"}],"termid":"MONDO:0011719","terms_by_termid":{"MONDO:0011719":null},"xrefs":{"Monarch":{"xref_id":"0011719"}}}


id: PBO:0064521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit B","termid":"PBO:0064521"}


id: PBO:0074052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 32","termid":"PBO:0074052"}


id: GO:1901853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5,6,7,8-tetrahydrosarcinapterin.","definition_xrefs":["UniPathway:UPA00069","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"},{"relation_name":"is_a","term_name":"tetrahydromethanopterin metabolic process","termid":"GO:2001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"5,6,7,8-tetrahydrosarcinapterin metabolic process","synonyms":[{"name":"5,6,7,8-tetrahydrosarcinapterin metabolism","type":"exact"}],"termid":"GO:1901853"}


id: PBO:0027762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_prospore_membrane_during_meiosis_II_with_protein_mislocalized_to_plasma_membrane","termid":"PBO:0027762"}


id: GO:0008088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules in neuron projections.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport along microtubule","termid":"GO:0010970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"axo-dendritic transport","secondary_identifiers":["Wikipedia:Axoplasmic_transport"],"synonyms":[{"name":"axon cargo transport","type":"narrow"},{"name":"axonal transport","type":"narrow"},{"name":"axoplasmic transport","type":"narrow"}],"termid":"GO:0008088"}


id: MONDO:1012114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypomyelinogenesis, non-human animal","termid":"MONDO:1011845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypomyelinogenesis, dog","secondary_identifiers":["OMIA:000527-9615"],"termid":"MONDO:1012114","xrefs":{"Monarch":{"xref_id":"1012114"}}}


id: PBO:0048052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 1","termid":"PBO:0048052"}


id: PBO:0057842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3156-2","termid":"PBO:0057842"}


id: GO:0070616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of thiamine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"regulates","term_name":"thiamine diphosphate biosynthetic process","termid":"GO:0009229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"regulation of thiamine diphosphate biosynthetic process","synonyms":[{"name":"regulation of thiamin diphosphate biosynthetic process","type":"exact"},{"name":"regulation of thiamine diphosphate anabolism","type":"exact"},{"name":"regulation of thiamine diphosphate biosynthesis","type":"exact"},{"name":"regulation of thiamine diphosphate formation","type":"exact"},{"name":"regulation of thiamine diphosphate synthesis","type":"exact"}],"termid":"GO:0070616"}


id: PBO:0041121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTBD3 antisense RNA 1","termid":"PBO:0041121"}


id: SO:0000548
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a transcript that is edited.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_coding_gene","termid":"SO:0001217"},{"relation_name":"transcribed_to","term_name":"edited_transcript","termid":"SO:0000873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_edited_transcript","synonyms":[{"name":"gene with edited transcript","type":"exact"}],"termid":"SO:0000548"}


id: GO:0046290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of isoflavonoid phytoalexins, a group of water-soluble phenolic derivatives isomeric with flavonoids that possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoflavonoid catabolic process","termid":"GO:0046288"},{"relation_name":"is_a","term_name":"isoflavonoid phytoalexin metabolic process","termid":"GO:0046289"},{"relation_name":"is_a","term_name":"phytoalexin catabolic process","termid":"GO:0052316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0019748","GO:0098754","GO:0008150"],"is_obsolete":false,"name":"isoflavonoid phytoalexin catabolic process","synonyms":[{"name":"isoflavonoid phytoalexin breakdown","type":"exact"},{"name":"isoflavonoid phytoalexin catabolism","type":"exact"},{"name":"isoflavonoid phytoalexin degradation","type":"exact"}],"termid":"GO:0046290"}


id: GO:0060010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the cellular identity of Sertoli cells is acquired and determined.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"epithelial cell fate commitment","termid":"GO:0072148"},{"relation_name":"part_of","term_name":"Sertoli cell differentiation","termid":"GO:0060008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Sertoli cell fate commitment","termid":"GO:0060010"}


id: PBO:0061360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 20","termid":"PBO:0061360"}


id: GO:0005856
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id: PBO:0013781
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  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by T. reesei dpm1","termid":"PBO:0013781"}


id: PBO:0003142
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  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.35","termid":"PBO:0003142"}


id: FYPO:0007075
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 14 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone ubiquitination during vegetative growth","termid":"FYPO:0002921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K14 ubiquitination during vegetative growth","synonyms":[{"name":"decreased histone H3-K14 ubiquitination during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K14 ubiquitination during vegetative growth","type":"exact"},{"name":"reduced histone H3-K14 ubiquitination during vegetative growth","type":"exact"}],"termid":"FYPO:0007075"}


id: GO:0070836
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a caveola. A caveola is a plasma membrane raft that forms a small pit, depression, or invagination that communicates with the outside of a cell and extends inward, indenting the cytoplasm and the cell membrane.","definition_xrefs":["PMID:12633858","GOC:BHF","GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane raft assembly","termid":"GO:0044854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0044085","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"caveola assembly","synonyms":[{"name":"caveola formation","type":"exact"},{"name":"caveolar biogenesis","type":"related"}],"termid":"GO:0070836"}


id: PR:O94245
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC737.04 gene.","definition_xrefs":["UniProtKB:O94245","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 protein C737.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.04","synonyms":[{"name":"Spom972h-SPCC737.04","type":"exact"}],"termid":"PR:O94245"}


id: GO:0019319
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hexose, any monosaccharide with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"hexose biosynthetic process","synonyms":[{"name":"hexose anabolism","type":"exact"},{"name":"hexose biosynthesis","type":"exact"},{"name":"hexose formation","type":"exact"},{"name":"hexose synthesis","type":"exact"}],"termid":"GO:0019319"}


id: FYPO:0007081
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initial release of duplicated spindle pole bodies that begins with the nucleation of microtubules from each SPB within the nucleus, and normally occurs as part of the first meiotic nuclear division, does not occur.","definition_xrefs":["PMID:31532702","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal initial meiotic spindle pole body separation in meiosis I","termid":"FYPO:0007080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"abolished initial meiotic spindle pole body separation in meiosis I","synonyms":[{"name":"abolished initial meiotic spindle pole body separation in first meiotic nuclear division","type":"exact"},{"name":"abolished initial mitotic SPB separation in meiosis I","type":"exact"},{"name":"abolished meiotic spindle pole body separation during meiosis I","type":"exact"},{"name":"initial meiotic spindle pole body separation in meiosis I abolished","type":"exact"}],"termid":"FYPO:0007081"}


id: PBO:0044842
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 130A","termid":"PBO:0044842"}


id: GO:0061721
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-sulfoquinovose(1-) resulting in the formation of glycerone phosphate (DHAP) and 3-sulfopropanediol(1-).","definition_xrefs":["PMID:24463506","PMID:14602517","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"},{"relation_name":"is_a","term_name":"propanediol metabolic process","termid":"GO:0051143"},{"relation_name":"is_a","term_name":"6-sulfoquinovose(1-) catabolic process","termid":"GO:1902777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) catabolic process to 3-sulfopropanediol(1-)","secondary_identifiers":["MetaCyc:PWY-7446"],"termid":"GO:0061721"}


id: GO:0006154
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  {"annotated_genes":["SJAG_02959","SJAG_02580"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87904,87905],"is_not":false,"summary":null,"term":"GO:0006154"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine metabolic process","termid":"GO:0046085"},{"relation_name":"is_a","term_name":"purine ribonucleoside catabolic process","termid":"GO:0046130"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02580":null,"SJAG_02959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"adenosine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006156"],"synonyms":[{"name":"adenosine breakdown","type":"exact"},{"name":"adenosine catabolism","type":"exact"},{"name":"adenosine degradation","type":"exact"},{"name":"adenosine phosphorolysis","type":"related"}],"termid":"GO:0006154","terms_by_termid":{"GO:0006154":null}}


id: MONDO:0036915
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the ovary and is characterized by the presence of neoplastic epithelium that resembles the epithelium of the endocervix or gastrointestinal tract. It includes mucinous adenofibroma, mucinous cystadenofibroma, and mucinous cystadenoma.","definition_xrefs":["NCIT:C40039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"ovarian mucinous neoplasm","termid":"MONDO:0003756"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign ovarian mucinous tumor","secondary_identifiers":["UMLS:C1511100","MEDGEN:267038"],"synonyms":[{"name":"benign ovarian mucinous neoplasm","type":"exact"},{"name":"benign ovarian mucinous tumor","type":"exact"},{"name":"ovarian mucinous neoplasm, benign","type":"exact"}],"termid":"MONDO:0036915","xrefs":{"Monarch":{"xref_id":"0036915"}}}


id: GO:0008126
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an acetic ester + H2O = an alcohol + acetate.","definition_xrefs":["EC:3.1.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain carboxylesterase activity","termid":"GO:0034338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"acetylesterase activity","secondary_identifiers":["UM-BBD_reactionID:r0170","MetaCyc:ACETYLESTERASE-RXN","RHEA:12957"],"synonyms":[{"name":"C-esterase (in animal tissues)","type":"narrow"},{"name":"acetic ester hydrolase activity","type":"related"},{"name":"acetic-ester acetylhydrolase activity","type":"related"},{"name":"chloroesterase","type":"narrow"},{"name":"citrus acetylesterase","type":"narrow"},{"name":"p-nitrophenyl acetate esterase","type":"narrow"}],"termid":"GO:0008126"}


id: MOD:00714
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to a methylated glycine, such as N-methylglycine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated glycine","synonyms":[{"name":"MeGly","type":"exact"}],"termid":"MOD:00714"}


id: PBO:0077250
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMED2 divergent transcript","termid":"PBO:0077250"}


id: PBO:0043217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLASP1 antisense RNA 1","termid":"PBO:0043217"}


id: PBO:0035841
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ribosomal_S6_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0035841"}


id: PBO:0043890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticotropin releasing hormone receptor 2","termid":"PBO:0043890"}


id: PR:O42870
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phenylalanine--tRNA ligase alpha subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01327","PANTHER:PTHR11538:SF15","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanine--tRNA ligase alpha subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.06","secondary_identifiers":["UniProtKB:O42870"],"synonyms":[{"name":"PheRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FARSA","type":"exact"},{"name":"phenylalanyl-tRNA synthetase alpha subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42870"}


id: GO:0009101
data:
  {"annotated_genes":["SJAG_02648","SJAG_04906","SJAG_01595","SJAG_01069","SJAG_01276","SJAG_01006","SJAG_02163","SJAG_04728","SJAG_04316","SJAG_04231","SJAG_04363","SJAG_00831","SJAG_00816","SJAG_00747","SJAG_00334","SJAG_02903","SJAG_03871","SJAG_03555","SJAG_03056","SJAG_03311","SJAG_02783","SJAG_00394","SJAG_05348","SJAG_03330","SJAG_04571","SJAG_04770","SJAG_03150","SJAG_02519","SJAG_04127","SJAG_01950","SJAG_00554","SJAG_03676","SJAG_03082","SJAG_01491","SJAG_04821","SJAG_03149","SJAG_03333","SJAG_01264","SJAG_03188","SJAG_05219","SJAG_00183","SJAG_04401","SJAG_03656","SJAG_03774","SJAG_02102","SJAG_01021","SJAG_02056","SJAG_04053","SJAG_02996","SJAG_00598","SJAG_04952","SJAG_03764","SJAG_04090","SJAG_01389","SJAG_04095","SJAG_03032","SJAG_03790","SJAG_00437","SJAG_04954","SJAG_00924","SJAG_01972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72446,77421,75152,87824,80764,74923,78372,79687,77965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000032"},{"annotations":[77072,65844,94228,100330,105361,111464,64611,61722,63620,77563,80347,73453,75335,100120,69461,91454],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[72330,68976,74830,63692,58748,75823,100368,118218,63329,96040,108757,114341,67079],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006486"},{"annotations":[75711,70338,80258,75150,77419,78371,74011,111086,76029,79685,77963,79481,74922,78673,111080],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006487"},{"annotations":[79900,99109,87827,74650,118452,79525,99112,79086,99111,98217,99110,100668,76572,105307],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0018279"},{"annotations":[79686,77964,111081,111087,118453,63048,75151],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006493"},{"annotations":[106327,93365,101883],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035269"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycoproteins, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00183":null,"SJAG_00334":null,"SJAG_00394":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_00816":null,"SJAG_00831":null,"SJAG_00924":null,"SJAG_01006":null,"SJAG_01021":null,"SJAG_01069":null,"SJAG_01264":null,"SJAG_01276":null,"SJAG_01389":null,"SJAG_01491":null,"SJAG_01595":null,"SJAG_01950":null,"SJAG_01972":null,"SJAG_02056":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02519":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02903":null,"SJAG_02996":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03082":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03188":null,"SJAG_03311":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03555":null,"SJAG_03656":null,"SJAG_03676":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03790":null,"SJAG_03871":null,"SJAG_04053":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04127":null,"SJAG_04231":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04401":null,"SJAG_04571":null,"SJAG_04728":null,"SJAG_04770":null,"SJAG_04821":null,"SJAG_04906":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_05219":null,"SJAG_05348":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoprotein biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycoprotein anabolism","type":"exact"},{"name":"glycoprotein biosynthesis","type":"exact"},{"name":"glycoprotein formation","type":"exact"},{"name":"glycoprotein synthesis","type":"exact"}],"termid":"GO:0009101","terms_by_termid":{"GO:0000032":null,"GO:0006486":null,"GO:0006487":null,"GO:0006488":null,"GO:0006493":null,"GO:0018279":null,"GO:0035269":null}}


id: PBO:0016886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR97","termid":"PBO:0016886"}


id: GO:0071032
data:
  {"annotated_genes":["SJAG_04198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116718],"is_not":false,"summary":null,"term":"GO:0071032"}]},"cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading incorrectly formed or aberrant nuclear mRNPs docked at the nuclear pore complex prior to export to the cytoplasm.","definition_xrefs":["GOC:dgf","GOC:krc","PMID:18644474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear mRNA surveillance","termid":"GO:0071028"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04198":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"nuclear mRNA surveillance of mRNP export","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear mRNA catabolic process of mRNAs in aberrant mRNPs","type":"exact"},{"name":"nuclear mRNA quality control of mRNAs in aberrant mRNPs","type":"exact"}],"termid":"GO:0071032","terms_by_termid":{"GO:0071032":null}}


id: PBO:0027201
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_nuclear_microtubules_protruding_through_nuclear_envelope_during_interphase","termid":"PBO:0027201"}


id: MONDO:0003369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the vagina. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C6326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vagina sarcoma","termid":"MONDO:0002140"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vagina leiomyosarcoma","secondary_identifiers":["DOID:5283","UMLS:C1336940","MEDGEN:277860"],"synonyms":[{"name":"leiomyosarcoma of the vagina","type":"exact"},{"name":"leiomyosarcoma of vagina","type":"exact"},{"name":"vagina leiomyosarcoma","type":"exact"},{"name":"vaginal leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003369","xrefs":{"Monarch":{"xref_id":"0003369"}}}


id: MONDO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor usually arising in the synovium of joints, bursa or tendon sheath. It is characterized by the presence of mononuclear cells, multinucleated osteoclast-like giant cells, hemosiderin-laden macrophages, foam cells, and an inflammatory infiltrate. According to the growth pattern, it is classified as localized or diffuse.","definition_xrefs":["NCIT:C3402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"giant cell tumor","termid":"MONDO:0002171"},{"relation_name":"is_a","term_name":"synovium neoplasm","termid":"MONDO:0002528"},{"relation_name":"is_a","term_name":"connective tissue neoplasm","termid":"MONDO:0021581"},{"relation_name":"is_a","term_name":"tendon sheath disorder","termid":"MONDO:0024876"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenosynovial giant cell tumor","secondary_identifiers":["ICD9:727.89","ICDO:9252/0","MEDGEN:232927","SCTID:95412009","UMLS:C1318543","DOID:314","ICD9:727.02","SCTID:310605004","EFO:1000562"],"synonyms":[{"name":"fibrous histiocytoma of tendon sheath","type":"exact"},{"name":"giant cell neoplasm of Tenosynovium","type":"exact"},{"name":"giant cell neoplasm of tendon sheath","type":"exact"},{"name":"giant cell neoplasm of the Tenosynovium","type":"exact"},{"name":"giant cell tumor of Tenosynovium","type":"exact"},{"name":"giant cell tumor of tendon sheath","type":"exact"},{"name":"giant cell tumor of the Tenosynovium","type":"exact"},{"name":"giant cell tumour of Tenosynovium","type":"exact"},{"name":"giant cell tumour of tendon sheath","type":"exact"},{"name":"giant cell tumour of the Tenosynovium","type":"exact"},{"name":"tendon sheath giant cell neoplasm","type":"exact"},{"name":"tendon sheath giant cell tumor","type":"exact"},{"name":"tendon sheath giant cell tumour","type":"exact"},{"name":"tenosynovial giant cell neoplasm","type":"exact"},{"name":"tenosynovial giant cell tumor","type":"exact"}],"termid":"MONDO:0002522","xrefs":{"Monarch":{"xref_id":"0002522"}}}


id: GO:0097242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which amyloid-beta is removed from extracellular brain regions by mechanisms involving cell surface receptors.","definition_xrefs":["GOC:bc","PMID:18289866","GOC:BHF","PMID:19098903","GOC:aruk","PMID:26005850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid-beta clearance","synonyms":[{"name":"beta-amyloid clearance","type":"exact"}],"termid":"GO:0097242"}


id: PBO:0056724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylphosphate capping enzyme","termid":"PBO:0056724"}


id: GO:0034335
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalytic introduction of negative supercoils into a DNA molecule or region thereof. In bacteria, negative supercoils are only introduced by DNA gyrase, a type II topoisomerase, but not all DNA gyrases are capable of introducing supercoils. In bacteria, the level of supercoiling varies widely between species and has been characterized properly in only a handful of organisms. The best characterized enzyme, from E.coli, is exceptionally proficient at supercoiling and this ability is not representative of all bacteria.","definition_xrefs":["GOC:bhm","GOC:mah","GOC:krc","WikiPedia:DNA_gyrase"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity","termid":"GO:0003918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"DNA negative supercoiling activity","synonyms":[{"name":"DNA gyrase activity","type":"related"},{"name":"DNA-gyrase activity","type":"related"}],"termid":"GO:0034335"}


id: PBO:0091101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-W ortholog","termid":"PBO:0091101"}


id: PBO:0047332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBLIM1 pseudogene 1","termid":"PBO:0047332"}


id: GO:0043367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a mature CD4-positive, alpha-beta T cell.","definition_xrefs":["CL:0000624","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"},{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell differentiation","synonyms":[{"name":"CD4-positive, alpha beta T cell development","type":"related"},{"name":"CD4-positive, alpha beta T cell differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T-cell differentiation","type":"exact"},{"name":"CD4-positive, alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0043367"}


id: PR:Q9UUJ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A COP9 signalosome complex subunit 7b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02077","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome complex subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.12c","secondary_identifiers":["UniProtKB:Q9UUJ7"],"synonyms":[{"name":"Spom972h-COPS7B","type":"exact"}],"termid":"PR:Q9UUJ7"}


id: PBO:0030614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cell_wall-degrading_enzymes","termid":"PBO:0030614"}


id: PBO:0114316
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat containing","termid":"PBO:0114316"}


id: GO:0010460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency or rate of heart contraction.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate","termid":"GO:0002027"},{"relation_name":"is_a","term_name":"positive regulation of heart contraction","termid":"GO:0045823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate","termid":"GO:0010460"}


id: FYPO:0009062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to X-rays.","direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to ionizing radiation during vegetative growth","termid":"FYPO:0002312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to X-rays during vegetative growth","synonyms":[{"name":"increased vegetative cell population growth during cellular response to X rays","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to X-rays","type":"exact"},{"name":"resistant to X rays during vegetative growth","type":"exact"},{"name":"resistant to X-rays during vegetative growth","type":"exact"}],"termid":"FYPO:0009062"}


id: FYPO:0001233
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003751"},{"annotations":[119984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount, distribution, composition or morphology of a cell part is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03250":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal subcellular component","references_by_uniquename":{"PMID:26774782":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03250","SJAG_02763"],"single_locus_genotype_uniquenames":["sst4delta","ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"normal subcellular structure","type":"related"}],"termid":"FYPO:0001233","terms_by_termid":{"FYPO:0003751":null,"FYPO:0003780":null}}


id: MONDO:0006784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized as a coagulation disturbance in newborns due to vitamin K deficiency resulting in impaired production of coagulation factors II, VII, IX, and X, and proteins C and S by the liver.","definition_xrefs":["NCIT:C111857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood coagulation disease","termid":"MONDO:0001531"},{"relation_name":"is_a","term_name":"nutritional disorder","termid":"MONDO:0005137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemorrhagic disease of newborn","secondary_identifiers":["ICD9:776.0","UMLS:C0019088","MESH:D006475","ICD10CM:P53","MedDRA:10019601","EFO:1000964","MEDGEN:42406","SCTID:12546009"],"synonyms":[{"name":"hemorrhagic disease of newborn","type":"exact"},{"name":"vitamin K deficiency bleeding in newborn","type":"exact"}],"termid":"MONDO:0006784","xrefs":{"Monarch":{"xref_id":"0006784"}}}


id: SO:0100008
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of five consecutive residues and two H-bonds in which: H-bond between CO of residue(i) and NH of residue(i+4), H-bond between CO of residue(i) and NH of residue(i+3),Phi angles of residues(i+1), (i+2) and (i+3) are negative.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"alpha_beta_motif","synonyms":[{"name":"alpha beta motif","type":"exact"}],"termid":"SO:0100008"}


id: PBO:0081376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 214","termid":"PBO:0081376"}


id: PBO:0004802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM-associated protein Mcm10","termid":"PBO:0004802"}


id: MONDO:0005646
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anisakiasis (obsolete MONDO:0005646)","termid":"MONDO:0005646","xrefs":{"Monarch":{"xref_id":"0005646"}}}


id: MONDO:0004984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biologic subset of breast carcinoma defined by high expression of genes characteristic of basal epithelial cells, including KRT5 and KRT17, annexin 8, CX3CL1, and TRIM29, and usually by lack of expression of the estrogen receptor (ER), progesterone receptor (PR), and human epidermal growth factor receptor 2 (HER2). It is the most common subtype of breast cancer associated with BRCA1 mutations, and is associated with a poor prognosis.","definition_xrefs":["NCIT:C53558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invasive ductal breast carcinoma","termid":"MONDO:0004953"},{"relation_name":"is_a","term_name":"triple-negative breast carcinoma","termid":"MONDO:0005494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"basal-like breast carcinoma","secondary_identifiers":["EFO:0000281","MEDGEN:770987","UMLS:C3642347"],"synonyms":[{"name":"basal-like breast cancer","type":"exact"},{"name":"basal-like breast carcinoma","type":"exact"},{"name":"basal-like subtype of breast carcinoma","type":"exact"}],"termid":"MONDO:0004984","xrefs":{"Monarch":{"xref_id":"0004984"}}}


id: PBO:0027177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_exchange_at_pericentric_heterochromatin","termid":"PBO:0027177"}


id: PBO:0044419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily W member 1","termid":"PBO:0044419"}


id: PBO:0071992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 21","termid":"PBO:0071992"}


id: GO:0072668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a tubulin complex. Includes the synthesis and folding of the constituent protein molecules, and those protein modifications that are involved in synthesis or assembly of the complex. A tubulin complex is a heterodimer of tubulins alpha and beta, from which microtubules are assembled.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete tubulin complex biogenesis (obsolete GO:0072668)","synonyms":[{"name":"tubulin complex biogenesis","type":"exact"}],"termid":"GO:0072668"}


id: PBO:0016052
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snu6 can be transcribed by human RNA polymerase III in cell extracts","termid":"PBO:0016052"}


id: PBO:0064419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNN antisense RNA 1","termid":"PBO:0064419"}


id: GO:0071712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of misfolded proteins transported from the endoplasmic reticulum and targeted to cytoplasmic proteasomes for degradation.","definition_xrefs":["PMID:19520858","PMID:14607247"],"gene_count":0,"genotype_count":0,"name":"obsolete ER-associated misfolded protein catabolic process (obsolete GO:0071712)","synonyms":[{"name":"endoplasmic reticulum-associated misfolded protein catabolism","type":"exact"}],"termid":"GO:0071712"}


id: GO:0033521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytyl diphosphate, (2E)-3,7,11,15-tetramethylhexadec-2-en-1-yl trihydrogen diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"phytyl diphosphate metabolic process","termid":"GO:0033519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phytyl diphosphate biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5063"],"synonyms":[{"name":"phytyl diphosphate anabolism","type":"exact"},{"name":"phytyl diphosphate biosynthesis","type":"exact"},{"name":"phytyl diphosphate formation","type":"exact"},{"name":"phytyl diphosphate synthesis","type":"exact"}],"termid":"GO:0033521"}


id: PBO:0088710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2457 family conserved fungal protein","termid":"PBO:0088710"}


id: PBO:0062747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily J member 2 pseudogene","termid":"PBO:0062747"}


id: PBO:0064433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase","termid":"PBO:0064433"}


id: PBO:0077876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiopurine S-methyltransferase pseudogene 3","termid":"PBO:0077876"}


id: GO:0000448
data:
  {"annotated_genes":["SJAG_03789","SJAG_02374","SJAG_02275","SJAG_01581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71896,92025,95297,104457],"is_not":false,"summary":null,"term":"GO:0000448"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage within ITS2 between the 5.8S rRNA and the LSU-rRNA of an rRNA molecule originally produced as a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000463"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01581":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_03789":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000490"],"synonyms":[{"name":"cleavage at C2","type":"related"},{"name":"cleavage in ITS2 of tricistronic rRNA transcript to separate 5.8S and LSU rRNAs (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","type":"exact"}],"termid":"GO:0000448","terms_by_termid":{"GO:0000448":null}}


