# terms

id: FYPO:0007783
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119525,119530],"is_not":false,"summary":null,"term":"FYPO:0007783"}],"single_locus_phenotype":[{"annotations":[119526],"is_not":false,"summary":null,"term":"FYPO:0007783"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cellular geometry scaling, by which cells normally maintain a fairly constant length:diameter (width) ratio upon changes in cell volume, does not occur.","definition_xrefs":["PomBase:mah","PMID:30664646"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal vegetative cell morphology","termid":"FYPO:0001118"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":3,"genotypes_by_uniquename":{"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"rga6delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga6delta wee1-as8(T582G aa)","display_uniquename":"rga6delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00028:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_00028","SJAG_04280"],"name":"abolished geometry scaling","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04522"],"single_locus_genotype_uniquenames":["rga4delta"],"synonyms":[{"name":"abolished cell geometry scaling","type":"exact"},{"name":"abolished cellular geometry scaling","type":"exact"},{"name":"abolished geometry scaling during mitotic cell cycle","type":"related"},{"name":"abolished geometry scaling during vegetative growth","type":"exact"},{"name":"geometry scaling abolished","type":"exact"}],"termid":"FYPO:0007783","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0007783":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0081354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 177","termid":"PBO:0081354"}


id: PBO:0049687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepcidin antimicrobial peptide","termid":"PBO:0049687"}


id: PR:O74800
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial inner membrane protease subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12383:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protease subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.07c","secondary_identifiers":["UniProtKB:O74800"],"synonyms":[{"name":"SPBC2D10.07c","type":"related"},{"name":"Spom972h-IMMP1L","type":"exact"}],"termid":"PR:O74800"}


id: GO:0044514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism initiates, promotes, or enhances a G protein-coupled receptor signaling pathway in another organism via the action of a venom.","definition_xrefs":["PMID:8405712","GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of G protein-coupled receptor signaling pathway","termid":"GO:0044513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated activation of G protein-coupled receptor signaling pathway","synonyms":[{"name":"envenomation resulting in positive regulation of G protein-coupled receptor activity in another organism","type":"exact"},{"name":"envenomation resulting in positive regulation of G protein-coupled receptor activity in other organism","type":"exact"},{"name":"envenomation resulting in positive regulation of G-protein coupled receptor activity in other organism","type":"exact"}],"termid":"GO:0044514"}


id: PBO:0048540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guided entry of tail-anchored proteins factor 1","termid":"PBO:0048540"}


id: GO:1903269
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of ornithine carbamoyltransferase inhibitor activity.","definition_xrefs":["GOC:bhm","PMID:12679340","GO_REF:0000088","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ornithine carbamoyltransferase inhibitor complex","synonyms":[{"name":"OTC-ARGI complex","type":"narrow"},{"name":"ornithine carbamoyltransferase arginase complex","type":"narrow"}],"termid":"GO:1903269"}


id: GO:0030633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of D-alanine and related amino acids.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete D-alanine family amino acid catabolic process (obsolete GO:0030633)","synonyms":[{"name":"D-alanine family amino acid breakdown","type":"exact"},{"name":"D-alanine family amino acid catabolism","type":"exact"},{"name":"D-alanine family amino acid degradation","type":"exact"}],"termid":"GO:0030633"}


id: PBO:0074338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1","termid":"PBO:0074338"}


id: GO:0120147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A [sulfatase]-L-cysteine + O2 + 2 a thiol = a [sulfatase]-3-oxo-L-alanine + hydrogen sulfide + a disulfide + H2O.","definition_xrefs":["RHEA:51152","EC:1.8.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"formylglycine-generating oxidase activity","secondary_identifiers":["MetaCyc:RXN-16226"],"termid":"GO:0120147"}


id: GO:0035944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a perforin protein due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"perforin production","termid":"GO:0035944"}


id: PBO:0048798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha q pseudogene 1","termid":"PBO:0048798"}


id: GO:0061567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into dCMP, deoxycytidine monophosphate, to produce dCDP. Addition of two phosphate groups produces dCTP.","definition_xrefs":["GOC:dph","PMID:23416111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dCMP phosphorylation","termid":"GO:0061567"}


id: PBO:0087252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; inhibits pheromone induced signaling downstream of MAPK, possibly at the level of the Ste12p transcription factor","termid":"PBO:0087252"}


id: GO:0043368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of sparing immature T cells which react with self-MHC protein complexes with low affinity levels from apoptotic death.","definition_xrefs":["PMID:12414722","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell selection","termid":"GO:0045058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive T cell selection","synonyms":[{"name":"positive T lymphocyte selection","type":"exact"},{"name":"positive T-cell selection","type":"exact"},{"name":"positive T-lymphocyte selection","type":"exact"}],"termid":"GO:0043368"}


id: PBO:0049167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 related adaptor protein","termid":"PBO:0049167"}


id: PBO:0073864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1","termid":"PBO:0073864"}


id: GO:0015934
data:
  {"annotated_genes":["SJAG_03666","SJAG_02611","SJAG_03423","SJAG_03335","SJAG_03040","SJAG_01303","SJAG_03133","SJAG_01128","SJAG_00921","SJAG_02081","SJAG_01630","SJAG_00537","SJAG_02531","SJAG_01364","SJAG_02510","SJAG_03383","SJAG_01473","SJAG_04534","SJAG_03043","SJAG_02283","SJAG_07014","SJAG_04414","SJAG_01478","SJAG_00155","SJAG_02836","SJAG_05216","SJAG_02280","SJAG_04066","SJAG_02312","SJAG_01463","SJAG_02121","SJAG_04490","SJAG_02871","SJAG_02546","SJAG_01829","SJAG_00749","SJAG_01608","SJAG_00765","SJAG_03425","SJAG_02755","SJAG_03919","SJAG_02891","SJAG_05573","SJAG_03284","SJAG_03297","SJAG_04847","SJAG_03159","SJAG_01568","SJAG_00465","SJAG_04304","SJAG_03127","SJAG_03459","SJAG_02243","SJAG_04207","SJAG_00086","SJAG_01591","SJAG_05244","SJAG_04893","SJAG_02535","SJAG_01588","SJAG_04493","SJAG_00220","SJAG_01194","SJAG_01727","SJAG_01045","SJAG_06253","SJAG_04020","SJAG_00497","SJAG_04478","SJAG_03402","SJAG_04689","SJAG_00726","SJAG_00166","SJAG_02890","SJAG_04897","SJAG_03326","SJAG_02802","SJAG_02762","SJAG_02597","SJAG_04216","SJAG_02207","SJAG_00315","SJAG_00034","SJAG_03649","SJAG_05218","SJAG_01322","SJAG_03197","SJAG_05270","SJAG_00799","SJAG_06612","SJAG_04889","SJAG_00844","SJAG_00748","SJAG_01202","SJAG_01565","SJAG_07009","SJAG_01551","SJAG_01853","SJAG_01606","SJAG_01413","SJAG_01411","SJAG_00629","SJAG_02071","SJAG_01676","SJAG_01719","SJAG_03922","SJAG_03971","SJAG_02840","SJAG_03122","SJAG_04160","SJAG_04019","SJAG_01365","SJAG_03176","SJAG_00940","SJAG_03364","SJAG_05248","SJAG_04626","SJAG_00384","SJAG_01721","SJAG_01580","SJAG_03636","SJAG_03192","SJAG_01087","SJAG_04176","SJAG_07013","SJAG_04244","SJAG_06110"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[114906,78783,75035,91349,80553,70696,106004,114907,75794,80700,75284,75732,78734,74459,72371,76136,77070,76755,99496,71605,58281,73600,72847,68089,71576,70428,73304,77181,106003,71615,70568,72314,73544,70667,78404,95244,74481,79327,75113,91348,72469,74354,76814,80158,114863,91350,117817,95243,74448,77776,78516,97406,117270,72551,72288,74008,75308,77286,74649,88397,72078,112576,74098,70233,79461,80401,73979,71493,97489,112577,72132,74787,76433,78478,77949,73661,72563,74630,76862,77304,70733,75807,78763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0022625"},{"annotations":[75977,79589,114978,108445,79977,77623,70008,75197,116541,73450,80748,104025,118312,111149,113107,78379,71225,80191,72851,72435,76990,107120,113830,112604,110211,78472,78238,96929,108593,76928,111477,79524,108543,73213,98311,115096,116650,72206,71594,106062,98290,75771,67317,78772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005762"}]},"cv_name":"cellular_component","definition":"The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosomal subunit","termid":"GO:0044391"}],"gene_count":127,"genes_by_uniquename":{"SJAG_00034":null,"SJAG_00086":null,"SJAG_00155":null,"SJAG_00166":null,"SJAG_00220":null,"SJAG_00315":null,"SJAG_00384":null,"SJAG_00465":null,"SJAG_00497":null,"SJAG_00537":null,"SJAG_00629":null,"SJAG_00726":null,"SJAG_00748":null,"SJAG_00749":null,"SJAG_00765":null,"SJAG_00799":null,"SJAG_00844":null,"SJAG_00921":null,"SJAG_00940":null,"SJAG_01045":null,"SJAG_01087":null,"SJAG_01128":null,"SJAG_01194":null,"SJAG_01202":null,"SJAG_01303":null,"SJAG_01322":null,"SJAG_01364":null,"SJAG_01365":null,"SJAG_01411":null,"SJAG_01413":null,"SJAG_01463":null,"SJAG_01473":null,"SJAG_01478":null,"SJAG_01551":null,"SJAG_01565":null,"SJAG_01568":null,"SJAG_01580":null,"SJAG_01588":null,"SJAG_01591":null,"SJAG_01606":null,"SJAG_01608":null,"SJAG_01630":null,"SJAG_01676":null,"SJAG_01719":null,"SJAG_01721":null,"SJAG_01727":null,"SJAG_01829":null,"SJAG_01853":null,"SJAG_02071":null,"SJAG_02081":null,"SJAG_02121":null,"SJAG_02207":null,"SJAG_02243":null,"SJAG_02280":null,"SJAG_02283":null,"SJAG_02312":null,"SJAG_02510":null,"SJAG_02531":null,"SJAG_02535":null,"SJAG_02546":null,"SJAG_02597":null,"SJAG_02611":null,"SJAG_02755":null,"SJAG_02762":null,"SJAG_02802":null,"SJAG_02836":null,"SJAG_02840":null,"SJAG_02871":null,"SJAG_02890":null,"SJAG_02891":null,"SJAG_03040":null,"SJAG_03043":null,"SJAG_03122":null,"SJAG_03127":null,"SJAG_03133":null,"SJAG_03159":null,"SJAG_03176":null,"SJAG_03192":null,"SJAG_03197":null,"SJAG_03284":null,"SJAG_03297":null,"SJAG_03326":null,"SJAG_03335":null,"SJAG_03364":null,"SJAG_03383":null,"SJAG_03402":null,"SJAG_03423":null,"SJAG_03425":null,"SJAG_03459":null,"SJAG_03636":null,"SJAG_03649":null,"SJAG_03666":null,"SJAG_03919":null,"SJAG_03922":null,"SJAG_03971":null,"SJAG_04019":null,"SJAG_04020":null,"SJAG_04066":null,"SJAG_04160":null,"SJAG_04176":null,"SJAG_04207":null,"SJAG_04216":null,"SJAG_04244":null,"SJAG_04304":null,"SJAG_04414":null,"SJAG_04478":null,"SJAG_04490":null,"SJAG_04493":null,"SJAG_04534":null,"SJAG_04626":null,"SJAG_04689":null,"SJAG_04847":null,"SJAG_04889":null,"SJAG_04893":null,"SJAG_04897":null,"SJAG_05216":null,"SJAG_05218":null,"SJAG_05244":null,"SJAG_05248":null,"SJAG_05270":null,"SJAG_05573":null,"SJAG_06110":null,"SJAG_06253":null,"SJAG_06612":null,"SJAG_07009":null,"SJAG_07013":null,"SJAG_07014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"large ribosomal subunit","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal large subunit","type":"exact"}],"termid":"GO:0015934","terms_by_termid":{"GO:0005762":null,"GO:0022625":null}}


id: GO:1900961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 17-methylnonadec-1-ene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of 17-methylnonadec-1-ene metabolic process","termid":"GO:1900959"},{"relation_name":"positively_regulates","term_name":"17-methylnonadec-1-ene metabolic process","termid":"GO:1900882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of 17-methylnonadec-1-ene metabolic process","synonyms":[{"name":"activation of 17-methylnonadec-1-ene metabolic process","type":"narrow"},{"name":"activation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"positive regulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"up regulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"up-regulation of 17-methylnonadec-1-ene metabolism","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene metabolic process","type":"exact"},{"name":"upregulation of 17-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900961"}


id: PBO:0048569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GGCT pseudogene 2","termid":"PBO:0048569"}


id: PBO:0085139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein required for rRNA synthesis and ribosomal assembly; required for the synthesis of 18S rRNA and for the assembly of 40S ribosomal subunit; essential gene","termid":"PBO:0085139"}


id: MONDO:0024881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that arises from a pre-existing lower grade lesion, or as a result of a primary lesion that has spread to secondary sites, or due to a complication of a cancer treatment.","definition_xrefs":["NCIT:C4968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"secondary neoplasm","termid":"MONDO:0024882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"secondary malignant neoplasm","secondary_identifiers":["UMLS:C3266877","MEDGEN:473807","ICD9:199.1","ICD9:198.89","EFO:0009812","SCTID:128462008"],"synonyms":[{"name":"secondary cancer","type":"exact"},{"name":"secondary malignancy","type":"exact"},{"name":"secondary malignant neoplasm","type":"exact"}],"termid":"MONDO:0024881","xrefs":{"Monarch":{"xref_id":"0024881"}}}


id: MONDO:0001406
data:
  {"annotated_genes":["SJAG_04213","SJAG_01895","SJAG_02398","SJAG_03920","SJAG_01111","SJAG_01671","SJAG_00260","SJAG_03163"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[87352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[87262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[85966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[86174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[87498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032771"},{"annotations":[87641,87642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm arising from a peripheral nerve or the perineural sheaths.","definition_xrefs":["NCIT:C3321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"},{"relation_name":"is_a","term_name":"nervous system neoplasm","termid":"MONDO:0021248"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01111":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02398":null,"SJAG_03163":null,"SJAG_03920":null,"SJAG_04213":null},"genotype_count":0,"is_obsolete":false,"name":"peripheral nervous system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:239.2","EFO:0002431","SCTID:126980002","UMLS:C0031118","ONCOTREE:PNS","DOID:1192","MEDGEN:45817","MESH:D010524"],"synonyms":[{"name":"CNS-excluded nervous sys. cancer","type":"narrow"},{"name":"PNS neoplasm","type":"exact"},{"name":"PNS neoplasms","type":"exact"},{"name":"PNS tumor","type":"exact"},{"name":"PNS tumour","type":"exact"},{"name":"neoplasm of PNS","type":"exact"},{"name":"neoplasm of peripheral nerve","type":"exact"},{"name":"neoplasm of peripheral nervous system","type":"exact"},{"name":"neoplasm of the PNS","type":"exact"},{"name":"neoplasm of the peripheral nerve","type":"exact"},{"name":"neoplasm of the peripheral nervous system","type":"exact"},{"name":"neoplasms, PNS","type":"exact"},{"name":"neoplasms, peripheral nervous system","type":"exact"},{"name":"nerve sheath neoplasm","type":"narrow"},{"name":"nerve sheath tumors","type":"narrow"},{"name":"nerve sheath tumours","type":"narrow"},{"name":"peripheral nerve neoplasm","type":"exact"},{"name":"peripheral nerve tumor","type":"exact"},{"name":"peripheral nerve tumour","type":"exact"},{"name":"peripheral nervous system neoplasm","type":"exact"},{"name":"peripheral nervous system neoplasm (disease)","type":"exact"},{"name":"peripheral nervous system tumor","type":"exact"},{"name":"peripheral nervous system tumour","type":"exact"},{"name":"tumor of PNS","type":"exact"},{"name":"tumor of peripheral nerve","type":"exact"},{"name":"tumor of peripheral nervous system","type":"exact"},{"name":"tumor of the PNS","type":"exact"},{"name":"tumor of the peripheral nerve","type":"exact"},{"name":"tumor of the peripheral nervous system","type":"exact"},{"name":"tumour of PNS","type":"exact"},{"name":"tumour of peripheral nerve","type":"exact"},{"name":"tumour of peripheral nervous system","type":"exact"},{"name":"tumour of the PNS","type":"exact"},{"name":"tumour of the peripheral nerve","type":"exact"},{"name":"tumour of the peripheral nervous system","type":"exact"}],"termid":"MONDO:0001406","terms_by_termid":{"MONDO:0007273":null,"MONDO:0008192":null,"MONDO:0011121":null,"MONDO:0011544":null,"MONDO:0013602":null,"MONDO:0024517":null,"MONDO:0032771":null},"xrefs":{"Monarch":{"xref_id":"0001406"}}}


id: PBO:0004096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm1","termid":"PBO:0004096"}


id: GO:0010720
data:
  {"annotated_genes":["SJAG_00514","SJAG_04853","SJAG_02392","SJAG_02169","SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90189,94911,96178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[102630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[91053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"positively_regulates","term_name":"cell development","termid":"GO:0048468"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell development","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010720","terms_by_termid":{"GO:0051519":null,"GO:0075296":null,"GO:1903024":null}}


id: MONDO:0016031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial dysmorphism-anorexia-cachexia-eye and skin anomalies syndrome","secondary_identifiers":["MEDGEN:419355","GARD:2221","Orphanet:1969","MESH:C536384","UMLS:C2931183"],"synonyms":[{"name":"Friedman-Goodman syndrome","type":"exact"},{"name":"faces syndrome","type":"exact"},{"name":"facial features (unique), anorexia, cachexia, eye and skin anomalies","type":"related"}],"termid":"MONDO:0016031","xrefs":{"Monarch":{"xref_id":"0016031"}}}


id: MONDO:0700027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome X is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonosome anomaly","termid":"MONDO:0020058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X disorder","termid":"MONDO:0700027","xrefs":{"Monarch":{"xref_id":"0700027"}}}


id: PBO:0084622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine-R-sulfoxide reductase; reduces the R enantiomer of free Met-SO, in contrast to Ycl033Cp which reduces Met-R-SO in a peptide linkage; has a role in protection against oxidative stress; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0084622"}


id: GO:0033924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6)-alpha-D-glucosidic linkages in dextrans, to remove successive isomaltotriose units from the non-reducing ends of the chains.","definition_xrefs":["EC:3.2.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"dextran 1,6-alpha-isomaltotriosidase activity","secondary_identifiers":["MetaCyc:3.2.1.95-RXN"],"synonyms":[{"name":"1,6-alpha-D-glucan isomaltotriohydrolase activity","type":"related"},{"name":"exo-isomaltotriohydrolase activity","type":"related"}],"termid":"GO:0033924"}


id: MONDO:0021935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A infectious disease involving the Aspergillus niger.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspergillosis","termid":"MONDO:0005657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspergillus niger infection","secondary_identifiers":["GARD:9716","MESH:C535390","MEDGEN:82916","UMLS:C0276657"],"synonyms":[{"name":"Aspergillus niger infection","type":"exact"},{"name":"Aspergillus niger infection, pulmonary","type":"related"},{"name":"infections, Aspergillus niger","type":"related"}],"termid":"MONDO:0021935","xrefs":{"Monarch":{"xref_id":"0021935"}}}


id: PBO:0030379
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_staurosporine","termid":"PBO:0030379"}


id: PBO:0054737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2146","termid":"PBO:0054737"}


id: MONDO:0007085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alopecia-epilepsy-pyorrhea-intellectual disability syndrome is characterized by congenital permanent alopecia universalis, intellectual disability, psychomotor epilepsy and periodontitis (pyorrhea). Total permanent alopecia and pyorrhea are invariably concomitant while intellectual disability and psychomotor epilepsy are observed in most patients. No other abnormality of nails or skin (apart from absence of hair) has been reported. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:1008"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia-epilepsy-pyorrhea-intellectual disability syndrome","secondary_identifiers":["MESH:C537057","SCTID:720980004","UMLS:C1863090","OMIM:104130","GARD:607","MEDGEN:350833"],"synonyms":[{"name":"Shokeir syndrome","type":"exact"},{"name":"alopecia, epilepsy, pyorrhea, mental subnormality","type":"related"},{"name":"alopecia, psychomotor epilepsy, pyorrhea, and mental subnormality","type":"related"},{"name":"congenital universal alopecia, epilepsy, mental subnormality and pyorrhea","type":"related"}],"termid":"MONDO:0007085","xrefs":{"Monarch":{"xref_id":"0007085"}}}


id: GO:0044315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins are transferred into the extracellular milieu or directly into host cells, via the type VII protein secretion system.","definition_xrefs":["PMID:19876390","PMID:17922044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"protein secretion by the type VII secretion system","termid":"GO:0044315"}


id: PBO:0038380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_chemical_role","termid":"PBO:0038380"}


id: SO:0001275
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified cytidine is a cytidine base feature which has been altered.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_RNA_base_feature","termid":"SO:0000250"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_cytidine","synonyms":[{"name":"modified cytidine","type":"exact"}],"termid":"SO:0001275"}


id: MONDO:0008665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ptosis-vocal cord paralysis syndrome is a rare, hereditary disorder with ptosis characterized by the combination of congenital bilateral recurrent laryngeal nerve paralysis and congenital bilateral ptosis. There have been no further descriptions in the literature since 1983.","definition_xrefs":["Orphanet:2997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ptosis-vocal cord paralysis syndrome","secondary_identifiers":["MEDGEN:349807","OMIM:193240","UMLS:C1860403","MESH:C536923","GARD:427"],"synonyms":[{"name":"congenital bilateral recurrent nerve paralysis and ptosis","type":"related"},{"name":"ptosis vocal cord paralysis","type":"related"},{"name":"tucker syndrome","type":"exact"},{"name":"vocal cord paralysis and ptosis","type":"related"}],"termid":"MONDO:0008665","xrefs":{"Monarch":{"xref_id":"0008665"}}}


id: PBO:0043822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceruloplasmin pseudogene","termid":"PBO:0043822"}


id: PBO:0072808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMD4A antisense RNA 1","termid":"PBO:0072808"}


id: GO:0140642
data:
  {"annotated_genes":["SJAG_01613","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99556,101777],"is_not":false,"summary":null,"term":"GO:0140642"}]},"cv_name":"biological_process","definition":"The spindle organization process in which the spindle is maintained at a constant length during meiotic metaphase.","definition_xrefs":["PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle assembly","termid":"GO:0090306"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0000226","GO:0007049","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"meiotic spindle formation (spindle phase two)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140642","terms_by_termid":{"GO:0140642":null}}


id: PBO:0034473
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_fatty_acid_saturation","termid":"PBO:0034473"}


id: PBO:0054144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1511","termid":"PBO:0054144"}


id: PBO:0040001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 13B","termid":"PBO:0040001"}


id: PBO:0067623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 795, pseudogene","termid":"PBO:0067623"}


id: PBO:0041671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase","termid":"PBO:0041671"}


id: PBO:0047164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 192 member B, pseudogene","termid":"PBO:0047164"}


id: PBO:0000825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-citrate synthase subunit 2 (predicted)","termid":"PBO:0000825"}


id: SO:0001475
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a primary transcript, that is removed via trans splicing.","definition_xrefs":["PMID:16401417","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outron","termid":"SO:0001475"}


id: GO:0023037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a light signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by light (obsolete GO:0023037)","synonyms":[{"name":"signal initiation by light","type":"exact"}],"termid":"GO:0023037"}


id: PBO:0075005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-16","termid":"PBO:0075005"}


id: PBO:0041436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 40","termid":"PBO:0041436"}


id: GO:0110150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of biomineralization, the formation and deposition of mineral crystals by living organisms.","definition_xrefs":["PMID:22992051"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of biomineralization (obsolete GO:0110150)","synonyms":[{"name":"negative regulation of biomineral formation","type":"narrow"},{"name":"negative regulation of biomineralisation","type":"exact"},{"name":"negative regulation of mineralisation","type":"exact"},{"name":"negative regulation of mineralization","type":"exact"}],"termid":"GO:0110150"}


id: PBO:0072315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 1","termid":"PBO:0072315"}


id: GO:0048250
data:
  {"annotated_genes":["SJAG_02473","SJAG_04260","SJAG_04737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70606,98409,114175],"is_not":false,"summary":null,"term":"GO:0048250"}]},"cv_name":"biological_process","definition":"The process in which iron is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["PMID:12006577","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transmembrane transport","termid":"GO:0034755"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02473":null,"SJAG_04260":null,"SJAG_04737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"iron import into the mitochondrion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1990925"],"synonyms":[{"name":"mitochondrial iron cation transmembrane transport","type":"exact"},{"name":"mitochondrial iron ion transmembrane transport","type":"related"},{"name":"mitochondrial iron ion transport","type":"related"},{"name":"mitochondrial iron transport","type":"exact"}],"termid":"GO:0048250","terms_by_termid":{"GO:0048250":null}}


id: GO:0016640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a cytochrome molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, cytochrome as acceptor","secondary_identifiers":["EC:1.4.2.-"],"termid":"GO:0016640"}


id: MONDO:0018337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete severe neonatal lactic acidosis due to NFS1-ISD11 complex deficiency (obsolete MONDO:0018337)","termid":"MONDO:0018337","xrefs":{"Monarch":{"xref_id":"0018337"}}}


id: GO:0061408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to heat stress (obsolete GO:0061408)","termid":"GO:0061408"}


id: GO:0035340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the purine ribonucleoside inosine, also known as hypoxanthine riboside, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:19135251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"inosine transport","synonyms":[{"name":"hypoxanthine riboside transport","type":"exact"}],"termid":"GO:0035340"}


id: MONDO:0024621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant serous cystic neoplasm usually involving the ovary or the pancreas. It is characterized by the presence of invasive malignant glandular epithelial cells which often form papillary structures.","definition_xrefs":["NCIT:C3778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serous adenocarcinoma","termid":"MONDO:0005278"},{"relation_name":"is_a","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"serous cystadenocarcinoma","secondary_identifiers":["MEDGEN:60212","UMLS:C0206701","ICDO:8441/3"],"synonyms":[{"name":"serous adenocarcinoma","type":"broad"},{"name":"serous cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0024621","xrefs":{"Monarch":{"xref_id":"0024621"}}}


id: GO:2000036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stem cell population maintenance.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stem cell population maintenance","synonyms":[{"name":"regulation of maintenance of pluripotency","type":"related"}],"termid":"GO:2000036"}


id: PBO:0046567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 9","termid":"PBO:0046567"}


id: MONDO:0004620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse subtype of classical Hodgkin lymphoma which is rich in Hodgkin and Reed-Sternberg cells and/or depleted in non-neoplastic lymphocytes. (WHO, 2008)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic Hodgkin lymphoma","termid":"MONDO:0009348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Hodgkin's lymphoma, lymphocytic depletion","secondary_identifiers":["NCIT:C9125","UMLS:C0152267","GARD:19594","Orphanet:98846","icd11.foundation:1729182645","ONCOTREE:LDCHL","SCTID:118610003","MEDGEN:57760","DOID:8628","ICD9:201.7"],"synonyms":[{"name":"Adult lymphocyte-depleted Classic Hodgkin lymphoma","type":"exact"},{"name":"Hodgkin lymphoma, lymphocyte depletion","type":"exact"},{"name":"Hodgkin's disease, lymphocytic depletion","type":"exact"},{"name":"Hodgkin's disease, lymphocytic depletion NOS (morphologic abnormality)","type":"exact"},{"name":"Hodgkin's disease, lymphocytic depletion, unspecified site, extranodal and solid organ sites","type":"exact"},{"name":"Hodgkin's lymphocytic depletion of unspecified site","type":"exact"},{"name":"adult HDLD","type":"exact"},{"name":"adult LDHD","type":"exact"},{"name":"adult lymphocyte depleted Hodgkin lymphoma","type":"exact"},{"name":"adult lymphocyte depleted Hodgkin's lymphoma","type":"exact"},{"name":"adult lymphocyte depleted classical Hodgkin lymphoma","type":"exact"},{"name":"adult lymphocyte depletion Hodgkin's disease","type":"exact"},{"name":"adult lymphocyte-depleted classical Hodgkin lymphoma","type":"exact"},{"name":"classic Hodgkin lymphoma, lymphocyte-depleted type","type":"exact"},{"name":"lymphocyte-depleted classical Hodgkin lymphoma","type":"exact"}],"termid":"MONDO:0004620","xrefs":{"Monarch":{"xref_id":"0004620"}}}


id: MONDO:0000821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000821 (obsolete MONDO:0000821)","termid":"MONDO:0000821","xrefs":{"Monarch":{"xref_id":"0000821"}}}


id: PBO:0029233
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_during_cellular_response_to_salt_stress","termid":"PBO:0029233"}


id: MONDO:0011216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hemochromatosis type 2 in which the cause of the disease is a mutation in the HJV gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemochromatosis type 2","termid":"MONDO:0019257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hemochromatosis type 2A","secondary_identifiers":["OMIM:602390","UMLS:C1865614","MEDGEN:356321","DOID:0111027"],"synonyms":[{"name":"HFE2A","type":"exact"},{"name":"HJV hemochromatosis type 2","type":"exact"},{"name":"hemochromatosis type 2 caused by mutation in HJV","type":"exact"},{"name":"hemochromatosis type 2A","type":"exact"},{"name":"hemochromatosis, juvenile","type":"related"},{"name":"hemochromatosis, type 2","type":"related"},{"name":"hemochromatosis, type 2A","type":"related"}],"termid":"MONDO:0011216","xrefs":{"Monarch":{"xref_id":"0011216"}}}


id: FYPO:0005674
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of ubiquitinated protein measured the cell is higher than normal during a cellular response to methyl methanesulfonate. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of ubiquitinated protein in cell during vegetative growth","termid":"FYPO:0002774"},{"relation_name":"is_a","term_name":"increased protein level during cellular response to methyl methanesulfonate","termid":"FYPO:0005333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased accumulation of ubiquitinated protein in cell during cellular response to methyl methanesulfonate","type":"related"},{"name":"increased level of ubiquitinated protein in cell during cellular response to MMS","type":"exact"},{"name":"increased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"increased level of ubiquitinated protein in cell during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"increased level of ubiquitylated protein in cell during cellular response to methyl methanesulfonate","type":"exact"},{"name":"increased ubiquitinated protein level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"}],"termid":"FYPO:0005674"}


id: PBO:0072654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 8A","termid":"PBO:0072654"}


id: PATO:0000749
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000749 gait value (obsolete PATO:0000749)","termid":"PATO:0000749"}


id: GO:0038086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a platelet-derived growth factor receptor (PDGFR) on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:17470632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor signaling pathway","termid":"GO:0038084"},{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"VEGF-activated platelet-derived growth factor receptor signaling pathway","synonyms":[{"name":"VEGF-A/PDGFR signaling","type":"narrow"},{"name":"VEGF-activated PDGFR signalling pathway","type":"exact"},{"name":"VEGF-activated platelet-derived growth factor receptor signalling pathway","type":"exact"},{"name":"VEGF/PDGFR signaling pathway","type":"exact"},{"name":"vascular endothelial growth factor-activated platelet-derived growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0038086"}


id: PATO:0002486
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a process by virtue of that process having two or more organisms as participants.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-organismal process quality","termid":"PATO:0002486"}


id: PBO:0067465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 592, pseudogene","termid":"PBO:0067465"}


id: MONDO:0011565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"abdominal obesity-metabolic syndrome","termid":"MONDO:0000816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"metabolic syndrome X","secondary_identifiers":["ICD9:277.7","MEDGEN:1640883","SCTID:237602007","UMLS:C4552048","OMIM:605552","MESH:D024821","DOID:14221"],"synonyms":[{"name":"AOMS1","type":"related"},{"name":"abdominal obesity metabolic syndrome","type":"related"},{"name":"abdominal obesity-metabolic syndrome 1","type":"exact"},{"name":"abdominal obesity-metabolic syndrome quantitative trait locus 1","type":"related"},{"name":"dysmetabolic syndrome X","type":"exact"},{"name":"metabolic syndrome 10","type":"related"},{"name":"metabolic syndrome type X","type":"exact"},{"name":"metabolic syndrome, protection against","type":"related"}],"termid":"MONDO:0011565","xrefs":{"Monarch":{"xref_id":"0011565"}}}


id: GO:0051725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more ADP-ribose residues from a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein de-ADP-ribosylation","synonyms":[{"name":"protein poly(ADP-ribose) catabolism","type":"exact"},{"name":"protein poly(ADP-ribose) degradation","type":"exact"},{"name":"protein poly(ADP-ribose) hydrolysis","type":"exact"},{"name":"removal of ADP-ribose from protein","type":"exact"},{"name":"poly(ADP-ribose) removal from protein","type":"exact"},{"name":"protein amino acid de-ADP-ribosylation","type":"exact"},{"name":"protein poly(ADP-ribose) catabolic process","type":"exact"}],"termid":"GO:0051725"}


id: GO:0009583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a light stimulus (in the form of photons) is received and converted into a molecular signal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"},{"relation_name":"is_a","term_name":"detection of external stimulus","termid":"GO:0009581"},{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of light stimulus","synonyms":[{"name":"detection of light","type":"exact"},{"name":"perception of light","type":"related"}],"termid":"GO:0009583"}


id: GO:0071957
data:
  {"annotated_genes":["SJAG_01082","SJAG_04140","SJAG_03508","SJAG_02514","SJAG_03835","SJAG_05196","SJAG_04943","SJAG_03048","SJAG_03936","SJAG_01215","SJAG_02609","SJAG_01386","SJAG_06270","SJAG_04468","SJAG_04558"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93169,95970,100001,102695,103157,105395,106749,107902,109218,109974,110895,110954,111572,113225,114879],"is_not":false,"summary":null,"term":"GO:0071957"}]},"cv_name":"cellular_component","definition":"The spindle pole body that exists in a cell prior to spindle pole body duplication. An old spindle pole body segregates to the daughter cell upon mitosis, and lacks active proteins involved in signaling exit from mitosis.","definition_xrefs":["GOC:vw","PMID:15132994","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":15,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01215":null,"SJAG_01386":null,"SJAG_02514":null,"SJAG_02609":null,"SJAG_03048":null,"SJAG_03508":null,"SJAG_03835":null,"SJAG_03936":null,"SJAG_04140":null,"SJAG_04468":null,"SJAG_04558":null,"SJAG_04943":null,"SJAG_05196":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005816","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"old mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"old SPB","type":"exact"}],"termid":"GO:0071957","terms_by_termid":{"GO:0071957":null}}


id: GO:1905741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mitochondrial calcium release that is involved in positive regulation of presynaptic cytosolic calcium concentration.","definition_xrefs":["PMID:26644474","GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"calcium export from the mitochondrion","termid":"GO:0099093"},{"relation_name":"part_of","term_name":"positive regulation of presynaptic cytosolic calcium concentration","termid":"GO:0099533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"calcium export from the mitochondrion involved in positive regulation of presynaptic cytosolic calcium concentration","synonyms":[{"name":"calcium ion transmembrane export from mitochondrion involved in positive regulation of presynaptic cytosolic calcium concentration","type":"exact"},{"name":"mitochondrial calcium release involved in positive regulation of presynaptic cytosolic calcium concentration","type":"exact"}],"termid":"GO:1905741"}


id: GO:0106179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of inorganic cations and their chelates.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on inorganic cations and their chelates (obsolete GO:0106179)","termid":"GO:0106179"}


id: MONDO:0007771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial progressive hyperpigmentation","termid":"MONDO:0013648"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hyperpigmentation with or without hypopigmentation, familial progressive","secondary_identifiers":["DOID:0111373","MEDGEN:333550","UMLS:C1840392","OMIM:145250","GARD:18073"],"synonyms":[{"name":"FPHH","type":"related"},{"name":"hyperpigmentation with or without hypopigmentation","type":"exact"},{"name":"hyperpigmentation with or without hypopigmentation, familial progressive","type":"exact"},{"name":"hyperpigmentation, familial progressive, 2","type":"related"},{"name":"hyperpigmentation, familial progressive, 2, formerly","type":"related"},{"name":"macules, hereditary congenital hypopigmented and hyperpigmented","type":"exact"},{"name":"melanosis universalis hereditaria","type":"related"},{"name":"melanosis, universal","type":"exact"}],"termid":"MONDO:0007771","xrefs":{"Monarch":{"xref_id":"0007771"}}}


id: PBO:0069243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 498, pseudogene","termid":"PBO:0069243"}


id: PBO:0067893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 195","termid":"PBO:0067893"}


id: PBO:0084171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-mobility group (HMG) protein; binds to and remodels nucleosomes; involved in recruiting FACT and other chromatin remodelling complexes to chromosomes; functionally redundant with Nhp6Bp; required for transcriptional initiation fidelity of some tRNA genes; homologous to mammalian HMGB1 and HMGB2; NHP6A has a paralog, NHP6B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0084171"}


id: MONDO:0009723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive neurological disease defined by specific neuropathological features associating brainstem and basal ganglia lesions.","definition_xrefs":["Orphanet:506"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"supranuclear oculomotor palsy","termid":"MONDO:0020257"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"Leigh syndrome","secondary_identifiers":["MESH:D007888","NANDO:1200175","NANDO:2200527","OMIM:256000","MedDRA:10062950","SCTID:29570005","icd11.foundation:672871576","DOID:3652","ICD9:330.8","GARD:6877","NCIT:C84814","UMLS:C2931891","MEDGEN:419518"],"synonyms":[{"name":"LS","type":"exact"},{"name":"LSS","type":"exact"},{"name":"Leigh disease","type":"exact"},{"name":"Leigh syndrome","type":"exact"},{"name":"Leigh syndrome due to mitochondrial Complex 1 deficiency","type":"related"},{"name":"Leigh syndrome due to mitochondrial Complex 2 deficiency","type":"related"},{"name":"Leigh syndrome due to mitochondrial Complex 3 deficiency","type":"related"},{"name":"Leigh syndrome due to mitochondrial Complex 4 deficiency","type":"related"},{"name":"Leigh syndrome due to mitochondrial Complex 5 deficiency","type":"related"},{"name":"Leigh syndrome spectrum","type":"exact"},{"name":"Leigh's disease","type":"exact"},{"name":"Leigh's necrotizing encephalopathy","type":"related"},{"name":"SNE","type":"related"},{"name":"infantile necrotizing encephalomyelopathy","type":"exact"},{"name":"infantile subacute necrotizing encephalopathy","type":"exact"},{"name":"juvenile subacute necrotizing encephalomyelopathy","type":"exact"},{"name":"necrotizing encephalopathy, infantile Subacute, of Leigh","type":"related"},{"name":"subacute necrotizing encephalomyelopathy","type":"related"},{"name":"subacute necrotizing encephalopathy","type":"related"}],"termid":"MONDO:0009723","xrefs":{"Monarch":{"xref_id":"0009723"}}}


id: PBO:0061416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide Y receptor Y1","termid":"PBO:0061416"}


id: PBO:0066425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RERE antisense RNA 1","termid":"PBO:0066425"}


id: PBO:0029328
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation","termid":"PBO:0029328"}


id: PBO:0056392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase binding protein 1","termid":"PBO:0056392"}


id: PBO:0091890
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin-associated Methyltransferase Complex subunit","termid":"PBO:0091890"}


id: GO:0032959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of inositol trisphosphate, 1,2,3,4,5,6-cyclohexanehexol, with three phosphate groups attached.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate metabolic process","termid":"GO:0032957"},{"relation_name":"is_a","term_name":"inositol phosphate biosynthetic process","termid":"GO:0032958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"inositol trisphosphate biosynthetic process","synonyms":[{"name":"IP3 biosynthesis","type":"exact"},{"name":"IP3 biosynthetic process","type":"exact"},{"name":"inositol trisphosphate anabolism","type":"exact"},{"name":"inositol trisphosphate biosynthesis","type":"exact"},{"name":"inositol trisphosphate formation","type":"exact"},{"name":"inositol trisphosphate synthesis","type":"exact"},{"name":"myo-inositol trisphosphate biosynthetic process","type":"narrow"}],"termid":"GO:0032959"}


id: SO:0002266
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the Bel-Pao superfamily are similar to LTRs in the Gypsy and Retrovirus superfamilies. Mainly described in metazoan genomes, this superfamily contain elements coding for specific proteins in this order: GAG, AP, RT, RH and INT. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bel_Pao_LTR_retrotransposon","synonyms":[{"name":"Bel Pao LTR retrotransposon","type":"exact"},{"name":"Bel-Pao LTR retrotransposon","type":"exact"},{"name":"RLB retrotransposon","type":"exact"}],"termid":"SO:0002266"}


id: MONDO:0008472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondyloepiphyseal dysplasia (SED), MacDermot type is characterized by short stature, femoral epiphyseal dysplasia, mild vertebral changes and sensorineural deafness.","definition_xrefs":["Orphanet:163668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia, MacDermot type","secondary_identifiers":["GARD:16996","MEDGEN:401067","icd11.foundation:800575171","OMIM:184000","UMLS:C1866719","MESH:C566659"],"synonyms":[{"name":"spondyloepiphyseal dysplasia, myopia, and sensorineural deafness","type":"related"},{"name":"spondyloepiphyseal dysplasia-myopia-sensorineural deafness syndrome","type":"exact"}],"termid":"MONDO:0008472","xrefs":{"Monarch":{"xref_id":"0008472"}}}


id: PBO:0049165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 7","termid":"PBO:0049165"}


id: MOD:00952
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an aspartic acid and the following glycine residue with the formation of (2-aminosuccinimidyl)acetic acid and the loss of a water molecule.","definition_xrefs":["PubMed:10801322","RESID:AA0441#ASP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"(2-aminosuccinimidyl)acetic acid","termid":"MOD:01628"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2-aminosuccinimidyl)acetic acid (Asp)","synonyms":[{"name":"(2-aminosuccinimidyl)acetic acid","type":"exact"},{"name":"(3-amino-2,5-dioxo-1-pyrrolidinyl)acetic acid","type":"exact"},{"name":"CROSSLNK (2-aminosuccinimidyl)acetic acid (Asp-Gly)","type":"exact"},{"name":"N-(2-aminosuccinyl)glycine","type":"exact"},{"name":"[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]acetic acid","type":"exact"},{"name":"anhydroaspartyl glycine","type":"exact"},{"name":"aspartimide glycine","type":"exact"}],"termid":"MOD:00952"}


id: PBO:0054783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2196","termid":"PBO:0054783"}


id: PR:O14216
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication regulator sld2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:11937031","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication regulator sld2","termid":"PR:000027523"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication regulator sld2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.11","secondary_identifiers":["PR:000027524","UniProtKB:O14216"],"synonyms":[{"name":"DNA replication regulator drc1","type":"exact"},{"name":"SPAC6B12.11","type":"related"},{"name":"Spom972h-SLD2","type":"exact"}],"termid":"PR:O14216"}


id: GO:0030597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of N-glycosidic bonds in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0140098","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"RNA glycosylase activity","termid":"GO:0030597"}


id: MONDO:0033560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 35","secondary_identifiers":["DOID:0112139","MEDGEN:1745427","GARD:16401","UMLS:C5436576","OMIM:619003"],"synonyms":[{"name":"MC1DN35","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 35","type":"related"}],"termid":"MONDO:0033560","xrefs":{"Monarch":{"xref_id":"0033560"}}}


id: FYPO:0005347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus has a pointed shape during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:12390246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002403","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"pointed nucleus during mitotic interphase","synonyms":[{"name":"pointed nucleus during interphase of mitotic cell cycle","type":"exact"},{"name":"pointed nucleus during mitotic interphase during vegetative growth","type":"exact"}],"termid":"FYPO:0005347"}


id: PBO:0083385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps dubious ORF YHR180C-B and long terminal repeat YHRCsigma3","termid":"PBO:0083385"}


id: PBO:0079710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 4","termid":"PBO:0079710"}


id: GO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss, or modification of macromolecules within a protein-DNA-RNA complex, resulting in the alteration of an existing complex.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA-RNA complex organization","termid":"GO:0001115"},{"relation_name":"is_a","term_name":"protein-containing complex remodeling","termid":"GO:0034367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA-RNA complex remodeling","termid":"GO:0001119"}


id: MONDO:0044355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated sternocostoclavicular hyperostosis is a rare rheumatologic disease characterized by predominantly bilateral, chronic, sterile inflammation and progressive sclerosis and hyperostosis of the sternocostoclavicular joint, with adjacent soft tissue ossification, in the absence of other joint involvement. It presents as recurrent episodes of pain, edema and/or erythema of the sternoclavicular region. Palmoplantar pustulosis may be additionally observed in some cases.","definition_xrefs":["Orphanet:178311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated sternocostoclavicular hyperostosis","secondary_identifiers":["MEDGEN:1640582","UMLS:C4707796","GARD:20144","SCTID:766711009"],"synonyms":[{"name":"isolated SCCH","type":"exact"}],"termid":"MONDO:0044355","xrefs":{"Monarch":{"xref_id":"0044355"}}}


id: GO:0004037
data:
  {"annotated_genes":["SJAG_00035"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75623],"is_not":false,"summary":null,"term":"GO:0004037"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: allantoate + H2O = (S)-ureidoglycolate + urea.","definition_xrefs":["EC:3.5.3.4","RHEA:11016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00035":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"allantoicase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R02422","MetaCyc:ALLANTOICASE-RXN"],"synonyms":[{"name":"allantoate amidinohydrolase activity","type":"related"},{"name":"allantoine amidinohydrolase activity","type":"exact"}],"termid":"GO:0004037","terms_by_termid":{"GO:0004037":null}}


id: PBO:0065250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20C","termid":"PBO:0065250"}


id: MONDO:0016080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital respiratory-biliary fistula (RBF) is a rare developmental defect characterized by an anomalous connection of trachea or bronchus with left hepatic duct presenting with respiratory distress, recurrent respiratory infections and biliary expectoration or vomitus.","definition_xrefs":["Orphanet:2040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital bronchobiliary fistula","secondary_identifiers":["icd11.foundation:420429663","SCTID:719452004","UMLS:C4304716","MEDGEN:930385","GARD:1475"],"termid":"MONDO:0016080","xrefs":{"Monarch":{"xref_id":"0016080"}}}


id: PBO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoadenosine phosphosulfate reductase","termid":"PBO:0001482"}


id: FYPO:0000215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which intracellular protein transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport during vegetative growth","termid":"FYPO:0000540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"abnormal intracellular protein transport during vegetative growth","synonyms":[{"name":"abnormal intracellular protein transport during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000215"}


id: PR:Q9US37
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1039.04 gene.","definition_xrefs":["UniProtKB:Q9US37","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C1039.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.04","synonyms":[{"name":"Spom972h-SPAC1039.04","type":"exact"}],"termid":"PR:Q9US37"}


id: PBO:0046875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM3D antisense RNA 1","termid":"PBO:0046875"}


id: MONDO:0800364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX12 defect","termid":"MONDO:0100266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019053","MONDO:0005066","MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"peroxisome biogenesis disorder, complementation group 3","secondary_identifiers":["MEDGEN:356508","UMLS:C1866340"],"synonyms":[{"name":"CG3","type":"exact"}],"termid":"MONDO:0800364","xrefs":{"Monarch":{"xref_id":"0800364"}}}


id: GO:2000198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ribonucleoprotein complex localization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of ribonucleoprotein complex localization","termid":"GO:2000197"},{"relation_name":"negatively_regulates","term_name":"ribonucleoprotein complex localization","termid":"GO:0071166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ribonucleoprotein complex localization","synonyms":[{"name":"negative regulation of RNP localization","type":"exact"},{"name":"negative regulation of cellular ribonucleoprotein complex localization","type":"exact"},{"name":"negative regulation of establishment and maintenance of ribonucleoprotein complex localization","type":"exact"},{"name":"negative regulation of ribonucleoprotein complex localisation","type":"exact"}],"termid":"GO:2000198"}


id: PBO:0005864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 4","termid":"PBO:0005864"}


id: PBO:0083010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box protein required for 27S rRNA processing; exhibits DNA, RNA and DNA/RNA helicase activities; ATPase activity shows preference for DNA over RNA; DNA helicase activity abolished by mutation in RNA-binding domain","termid":"PBO:0083010"}


id: GO:0015361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["TC:2.A.47.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium:dicarboxylate symporter activity","termid":"GO:0017153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"low-affinity sodium:dicarboxylate symporter activity","secondary_identifiers":["Reactome:R-HSA-433131"],"synonyms":[{"name":"low affinity sodium:dicarboxylate cotransporter activity","type":"broad"},{"name":"low affinity sodium:dicarboxylate symporter activity","type":"exact"}],"termid":"GO:0015361"}


id: PBO:0075938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and cysteine rich domain","termid":"PBO:0075938"}


id: PBO:0079417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 11","termid":"PBO:0079417"}


id: PBO:0070073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 30, pseudogene","termid":"PBO:0070073"}


id: GO:0102350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexacosanoyl-CoA(4-) + NADP(3-) = trans-2-hexacosenoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-cerot-2-enoyl-CoA reductase activity (obsolete GO:0102350)","termid":"GO:0102350"}


id: PBO:0003217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Sec11 (predicted)","termid":"PBO:0003217"}


id: MONDO:0009382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hyperbilirubinemia","termid":"MONDO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperbilirubinemia, shunt, primary","secondary_identifiers":["OMIM:237800","UMLS:C3550398","MEDGEN:763312"],"synonyms":[{"name":"PSHB","type":"exact"},{"name":"hyperbilirubinemia, shunt, primary","type":"exact"}],"termid":"MONDO:0009382","xrefs":{"Monarch":{"xref_id":"0009382"}}}


id: PBO:0080205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VEZT pseudogene 1","termid":"PBO:0080205"}


id: PBO:0081713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 638","termid":"PBO:0081713"}


id: PBO:0046040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit gamma","termid":"PBO:0046040"}


id: MONDO:0005000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chromophobe renal cell carcinoma (obsolete MONDO:0005000)","termid":"MONDO:0005000","xrefs":{"Monarch":{"xref_id":"0005000"}}}


id: PR:Q9UTB8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PHD finger-like domain-containing protein 5A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01040","PANTHER:PTHR13120:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor ini1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.02c","secondary_identifiers":["UniProtKB:Q9UTB8"],"synonyms":[{"name":"Spom972h-PHF5A","type":"exact"}],"termid":"PR:Q9UTB8"}


id: GO:0045099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A type of intermediate filament.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete vimentin (obsolete GO:0045099)","synonyms":[{"name":"vimentin","type":"exact"}],"termid":"GO:0045099"}


id: MONDO:0017688
data:
  {"annotated_genes":["SJAG_00605","SJAG_00839","SJAG_02369","SJAG_02009","SJAG_04495","SJAG_03247","SJAG_02796","SJAG_04192","SJAG_04334","SJAG_02107","SJAG_00461","SJAG_03660"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87394,87393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011534"},{"annotations":[85492,85493,85491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013046"},{"annotations":[87565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010392"},{"annotations":[86175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009865"},{"annotations":[86013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[86516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[86825,86824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[87597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014674"},{"annotations":[85476,85477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007453"},{"annotations":[86798,86799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[86744,86745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"},{"annotations":[85934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[86125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolism disorder","termid":"MONDO:0016789"},{"relation_name":"is_a","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"},{"relation_name":"is_a","term_name":"inborn disorder of purine or pyrimidine metabolism","termid":"MONDO:0019254"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_03247":null,"SJAG_03660":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254","MONDO:0037792"],"is_obsolete":false,"name":"disorder of glycolysis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1825948","Orphanet:308459","UMLS:C5681073","GARD:21306"],"termid":"MONDO:0017688","terms_by_termid":{"MONDO:0007453":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009865":null,"MONDO:0009950":null,"MONDO:0010392":null,"MONDO:0011236":null,"MONDO:0011534":null,"MONDO:0013046":null,"MONDO:0013275":null,"MONDO:0014221":null,"MONDO:0014674":null,"MONDO:0100165":null},"xrefs":{"Monarch":{"xref_id":"0017688"}}}


id: MONDO:0957247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 22A, classic","secondary_identifiers":["OMIM:620351","MEDGEN:1841089","UMLS:C5830453","DOID:0081354"],"termid":"MONDO:0957247","xrefs":{"Monarch":{"xref_id":"0957247"}}}


id: FYECO:0000376
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium containing pyruvate, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate MM","synonyms":[{"name":"pyruvate minimal medium","type":"exact"}],"termid":"FYECO:0000376"}


id: PBO:0083718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein with chaperone and co-chaperone activity; involved in retention of resident ER proteins; has a role in recognizing proteins targeted for ER-associated degradation (ERAD), member of the protein disulfide isomerase family","termid":"PBO:0083718"}


id: GO:1901888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell junction assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"cell junction assembly","termid":"GO:0034329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of cell junction assembly","termid":"GO:1901888"}


id: GO:0009204
data:
  {"annotated_genes":["SJAG_03797","SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62128],"is_not":false,"summary":null,"term":"GO:0009204"},{"annotations":[99321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a deoxyribonucleoside triphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate catabolic process","termid":"GO:0009143"},{"relation_name":"is_a","term_name":"deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009200"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03797":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"deoxyribonucleoside triphosphate catabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribonucleoside triphosphate breakdown","type":"exact"},{"name":"deoxyribonucleoside triphosphate catabolism","type":"exact"},{"name":"deoxyribonucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009204","terms_by_termid":{"GO:0009204":null,"GO:0035863":null}}


id: PATO:0001266
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of blue hue and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blue","termid":"PATO:0000318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated blue","synonyms":[{"name":"pale blue","type":"exact"}],"termid":"PATO:0001266"}


id: MONDO:0002489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A phyllodes tumor of the breast characterized by infiltrative margins and a sarcomatous stromal component. The sarcomatous stroma usually displays features of fibrosarcoma. Liposarcomatous, osteosarcomatous, or rhabdomyosarcomatous elements may also be present.","definition_xrefs":["NCIT:C4504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast cancer","termid":"MONDO:0007254"},{"relation_name":"is_a","term_name":"breast phyllodes tumor","termid":"MONDO:0021047"},{"relation_name":"is_a","term_name":"malignant phyllodes tumor","termid":"MONDO:0037003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant breast phyllodes tumor","secondary_identifiers":["EFO:0008545","DOID:3016","MEDGEN:87543","SCTID:254844000","ONCOTREE:MPT","UMLS:C0346154"],"synonyms":[{"name":"breast malignant phyllodes tumor","type":"related"},{"name":"breast malignant phyllodes tumour","type":"related"},{"name":"breast phyllodes tumor, malignant","type":"exact"},{"name":"malignant breast phyllodes neoplasm","type":"exact"},{"name":"malignant breast phyllodes tumor","type":"exact"},{"name":"malignant cystosarcoma phyllodes","type":"related"},{"name":"malignant cystosarcoma phyllodes (morphologic abnormality)","type":"related"},{"name":"malignant cystosarcoma phyllodes of breast","type":"exact"},{"name":"malignant cystosarcoma phyllodes of the breast","type":"exact"},{"name":"malignant mammary phyllodes neoplasm","type":"exact"},{"name":"malignant mammary phyllodes tumor","type":"exact"},{"name":"malignant mammary phyllodes tumour","type":"exact"},{"name":"malignant phyllodes breast neoplasm","type":"exact"},{"name":"malignant phyllodes neoplasm","type":"broad"},{"name":"malignant phyllodes neoplasm of breast","type":"exact"},{"name":"malignant phyllodes neoplasm of the breast","type":"exact"},{"name":"malignant phyllodes tumor (morphologic abnormality)","type":"exact"},{"name":"malignant phyllodes tumor of breast","type":"exact"},{"name":"malignant phyllodes tumor of the breast","type":"exact"},{"name":"malignant phyllodes tumour","type":"related"},{"name":"malignant phyllodes tumour (morphologic abnormality)","type":"exact"},{"name":"malignant phyllodes tumour of breast","type":"exact"},{"name":"malignant phyllodes tumour of the breast","type":"exact"},{"name":"phyllodes breast neoplasm","type":"broad"},{"name":"phyllodes breast tumor","type":"broad"},{"name":"phyllodes breast tumour","type":"broad"},{"name":"phyllodes tumor, malignant (morphologic abnormality)","type":"broad"}],"termid":"MONDO:0002489","xrefs":{"Monarch":{"xref_id":"0002489"}}}


id: GO:1903395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary cell septum biogenesis.","definition_xrefs":["PMID:23878277","GO_REF:0000058","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"regulates","term_name":"secondary cell septum biogenesis","termid":"GO:1990344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0008150","GO:0000281"],"is_obsolete":false,"name":"regulation of secondary cell septum biogenesis","termid":"GO:1903395"}


id: GO:0170008
data:
  {"annotated_genes":["SJAG_02638","SJAG_01746","SJAG_05694"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91655,110258,112538],"is_not":false,"summary":null,"term":"GO:0170008"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of mRNA phosphatase.","definition_xrefs":["PMID:22323607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01746":null,"SJAG_02638":null,"SJAG_05694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140677","GO:0030234"],"is_obsolete":false,"name":"mRNA phosphatase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0170008","terms_by_termid":{"GO:0170008":null}}


id: MONDO:0007400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Jackson-Weiss syndrome (JWS) is a rare genetic disorder characterized by foot malformations (tarsal and metatarsal fusions; short, broad, medially deviated great toes) and in some patients craniosynostosis with facial anomalies. Hands are normal in affected patients.","definition_xrefs":["Orphanet:1540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrocephalosyndactyly","termid":"MONDO:0019796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Jackson-Weiss syndrome","secondary_identifiers":["SCTID:709105005","DOID:0111337","MEDGEN:208653","OMIM:123150","MESH:C537559","UMLS:C0795998","NCIT:C123814","GARD:6796","ICD9:759.89"],"synonyms":[{"name":"JWS","type":"exact"},{"name":"Jackson-Weiss syndrome","type":"exact"},{"name":"craniosynostosis, midfacial hypoplasia, and foot abnormalities","type":"related"},{"name":"craniosynostosis-midfacial hypoplasia-foot abnormalities syndrome","type":"exact"}],"termid":"MONDO:0007400","xrefs":{"Monarch":{"xref_id":"0007400"}}}


id: PBO:0082862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm D1; part of heteroheptameric complex (with Smb1p, Smd2p, Smd3p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; relocalizes to the cytosol in response to hypoxia; homolog of human Sm D1; protein abundance increases in response to DNA replication stress","termid":"PBO:0082862"}


id: PBO:0085518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S18 and bacterial S13; RPS18B has a paralog, RPS18A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0085518"}


id: GO:0008214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an alkyl group from a protein amino acid. Alkyl groups are derived from alkanes by removal of one hydrogen atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein dealkylation","synonyms":[{"name":"protein amino acid dealkylation","type":"exact"}],"termid":"GO:0008214"}


id: MONDO:0002506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete early myoclonic encephalopathy (obsolete MONDO:0002506)","termid":"MONDO:0002506","xrefs":{"Monarch":{"xref_id":"0002506"}}}


id: PR:000027589
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2, initiator methionine removed unphosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136.","definition_xrefs":["PMID:20929775","PomBase:MAH","PMID:11242054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed unphosphorylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/PhosRes-","type":"exact"}],"termid":"PR:000027589"}


id: GO:0045303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-2,4-diaminobutyrate = L-aspartate 4-semialdehyde + L-glutamate.","definition_xrefs":["EC:2.6.1.76","RHEA:11160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"diaminobutyrate-2-oxoglutarate transaminase activity","secondary_identifiers":["KEGG_REACTION:R06977","MetaCyc:R101-RXN"],"synonyms":[{"name":"2,4-diaminobutyrate 4-aminotransferase activity","type":"related"},{"name":"DAB aminotransferase activity","type":"related"},{"name":"DABA aminotransferase activity","type":"related"},{"name":"EctB","type":"related"},{"name":"L-2,4-diaminobutanoate:2-oxoglutarate 4-aminotransferase activity","type":"related"},{"name":"L-2,4-diaminobutyrate:2-ketoglutarate 4-aminotransferase activity","type":"related"},{"name":"L-2,4-diaminobutyrate:2-oxoglutarate 4-aminotransferase activity","type":"related"},{"name":"diaminibutyric acid aminotransferase activity","type":"related"},{"name":"diaminobutyrate transaminase activity","type":"related"},{"name":"diaminobutyrate--2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0045303"}


id: FYPO:0003470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mRNA splicing via the spliceosome is increased.","definition_xrefs":["PomBase:mah","PMID:24298023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"},{"relation_name":"is_a","term_name":"increased RNA splicing, via spliceosome","termid":"FYPO:0002916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased mRNA splicing, via spliceosome","synonyms":[{"name":"increased mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"increased mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"increased nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"increased splicing","type":"broad"}],"termid":"FYPO:0003470"}


id: MONDO:0005546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic disorder of unknown etiology characterized by pain, stiffness, and tenderness in the muscles of neck, shoulders, back, hips, arms, and legs. Other signs and symptoms include headaches, fatigue, sleep disturbances, and painful menstruation.","definition_xrefs":["NCIT:C87497"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"myositis disease","termid":"MONDO:0021167"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"chronic pain syndrome","termid":"MONDO:0024317"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromyalgia","secondary_identifiers":["ICD10CM:M79.7","ICD9:729.1","Orphanet:41842","MESH:D005356","EFO:0005687","UMLS:C0016053","SCTID:203082005","MEDGEN:42018","SCTID:24693007","DOID:631"],"synonyms":[{"name":"fibromyalgia","type":"exact"},{"name":"fibromyalgia syndrome","type":"exact"}],"termid":"MONDO:0005546","xrefs":{"Monarch":{"xref_id":"0005546"}}}


id: MONDO:0007405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Crouzon disease is characterized by craniosynostosis and facial hypoplasia.","definition_xrefs":["Orphanet:207"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Crouzon syndrome","secondary_identifiers":["SCTID:28861008","NANDO:2200845","GARD:6206","DOID:2339","icd11.foundation:1535725821","OMIM:123500","UMLS:C0010273","MEDGEN:1162","MESH:D003394","NANDO:1200666","NCIT:C84653"],"synonyms":[{"name":"Cfd1","type":"related"},{"name":"Crouzon craniofacial dysostosis","type":"exact"},{"name":"Crouzon disease","type":"related"},{"name":"Crouzon syndrome","type":"exact"},{"name":"Crouzon's disease","type":"related"},{"name":"craniofacial dysostosis","type":"exact"},{"name":"craniofacial dysostosis type 1","type":"related"},{"name":"craniofacial dysostosis, type 1","type":"related"}],"termid":"MONDO:0007405","xrefs":{"Monarch":{"xref_id":"0007405"}}}


id: PBO:0042890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP418 antisense RNA 1","termid":"PBO:0042890"}


id: PBO:0016920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR96","termid":"PBO:0016920"}


id: PBO:0077354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 94","termid":"PBO:0077354"}


id: GO:1990376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter in response to nitrogen starvation that results in negative regulation of mitotic G1/S transition.","definition_xrefs":["PMID:9135083"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G1/S transition of mitotic cell cycle by positive regulation of transcription from RNA polymerase II promoter in response to nitrogen starvation (obsolete GO:1990376)","termid":"GO:1990376"}


id: MONDO:0003973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of testicular seminoma characterized by the presence of seminoma cells arranged in tubular patterns and few lymphocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular seminoma","termid":"MONDO:0003669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"tubular variant testicular seminoma","secondary_identifiers":["DOID:6706","MEDGEN:308259","UMLS:C1515294","NCIT:C40959"],"synonyms":[{"name":"testicular seminoma, tubular variant","type":"exact"}],"termid":"MONDO:0003973","xrefs":{"Monarch":{"xref_id":"0003973"}}}


id: GO:0016464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O = ADP + phosphate; drives the transport of proteins into the chloroplast stroma.","definition_xrefs":["EC:7.4.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-transporting ATPase activity","termid":"GO:0015450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0140318","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"chloroplast protein-transporting ATPase activity","secondary_identifiers":["MetaCyc:3.6.3.52-RXN"],"synonyms":[{"name":"AAA chloroplast protein-transporting ATPase","type":"exact"},{"name":"ATPase-coupled chloroplast protein transporter activity","type":"exact"}],"termid":"GO:0016464"}


id: PR:O14003
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication factor C subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.10c","secondary_identifiers":["UniProtKB:O14003"],"synonyms":[{"name":"Spom972h-RFC5","type":"exact"},{"name":"replication factor C3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14003"}


id: GO:0030986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kininogen of low molecular mass.","definition_xrefs":["PMID:9520414","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kininogen binding","termid":"GO:0030984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"low molecular weight kininogen binding","synonyms":[{"name":"LK binding","type":"exact"},{"name":"LMW kininogen binding","type":"exact"}],"termid":"GO:0030986"}


id: PBO:0004334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L10a","termid":"PBO:0004334"}


id: GO:0097141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BIM and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BIM-BCL-2 complex","termid":"GO:0097141"}


id: MONDO:0009810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive distal osteolysis syndrome is an early-onset distal osteolysis characterized by severe resorption of the hands and feet and absence of the distal and middle phalanges. It has been described in a son and daughter born to consanguineous parents. Other manifestations include distal muscular hypertrophy, flexion contractures, short stature, mild intellectual deficit and characteristic facies (maxillary hypoplasia, exophthalmos, and a broad nasal tip). It is transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:2776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive distal osteolysis syndrome","secondary_identifiers":["MESH:C536052","UMLS:C1850143","MEDGEN:376714","GARD:4299","OMIM:259610","icd11.foundation:1878981266","SCTID:715487005"],"synonyms":[{"name":"Petit-Fryns syndrome","type":"exact"},{"name":"distal osteolysis-short stature-intellectual disability syndrome","type":"exact"},{"name":"osteolysis syndrome recessive","type":"related"},{"name":"osteolysis syndrome, recessive","type":"related"},{"name":"osteolysis, distal, with short stature, intellectual disability, and characteristic Facial appearance","type":"related"},{"name":"osteolysis, distal, with short stature, intellectual disability, and characteristic facial appearance","type":"related"},{"name":"osteolysis, distal, with short stature, mental retardation, and characteristic Facial appearance","type":"related"},{"name":"osteolysis, distal, with short stature, mental retardation, and characteristic facial appearance","type":"related"}],"termid":"MONDO:0009810","xrefs":{"Monarch":{"xref_id":"0009810"}}}


id: PBO:0033826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase escort protein Mrs6 (predicted)","termid":"PBO:0033826"}


id: FYPO:0006166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, has more than one nucleus, and has a larger volume and is longer, than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"inviable branched, swollen, elongated vegetative cell","termid":"FYPO:0004494"},{"relation_name":"is_a","term_name":"branched, swollen, elongated, multinucleate vegetative cell","termid":"FYPO:0006165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000032","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"inviable branched, swollen, elongated, multinucleate vegetative cell","synonyms":[{"name":"inviable branched, elongated, swollen, multinucleate vegetative cell","type":"exact"},{"name":"inviable branched, swollen, elongated, multinucleate cell during vegetative growth","type":"exact"},{"name":"inviable branched, swollen, elongated, multinucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; branched, swollen, elongated, multinucleate vegetative cell","type":"exact"}],"termid":"FYPO:0006166"}


id: MONDO:0023165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"},{"relation_name":"is_a","term_name":"endosalpingiosis","termid":"MONDO:0001283"},{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"florid cystic endosalpingiosis of the uterus","secondary_identifiers":["MEDGEN:419405","MESH:C537064","UMLS:C2931410"],"synonyms":[{"name":"cystic endosalpingiosis of the uterus","type":"related"},{"name":"florid cystic endosalpingiosis","type":"related"},{"name":"intramural florid cystic endosalpingiosis in lower uterine segment of the uterus","type":"related"},{"name":"intramural florid cystic endosalpingiosis of the uterus","type":"related"}],"termid":"MONDO:0023165","xrefs":{"Monarch":{"xref_id":"0023165"}}}


id: GO:1900451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glutamate receptor signaling pathway.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of glutamate receptor signaling pathway","termid":"GO:1900449"},{"relation_name":"positively_regulates","term_name":"glutamate receptor signaling pathway","termid":"GO:0007215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glutamate receptor signaling pathway","synonyms":[{"name":"activation of glutamate receptor signaling pathway","type":"narrow"},{"name":"activation of glutamate signaling pathway","type":"exact"},{"name":"activation of glutamate signalling pathway","type":"exact"},{"name":"positive regulation of glutamate signaling pathway","type":"exact"},{"name":"positive regulation of glutamate signalling pathway","type":"exact"},{"name":"up regulation of glutamate receptor signaling pathway","type":"exact"},{"name":"up regulation of glutamate signaling pathway","type":"exact"},{"name":"up regulation of glutamate signalling pathway","type":"exact"},{"name":"up-regulation of glutamate receptor signaling pathway","type":"exact"},{"name":"up-regulation of glutamate signaling pathway","type":"exact"},{"name":"up-regulation of glutamate signalling pathway","type":"exact"},{"name":"upregulation of glutamate receptor signaling pathway","type":"exact"},{"name":"upregulation of glutamate signaling pathway","type":"exact"},{"name":"upregulation of glutamate signalling pathway","type":"exact"}],"termid":"GO:1900451"}


id: MONDO:0011660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the MYO6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 22","secondary_identifiers":["MEDGEN:419894","OMIM:606346","GARD:9167","UMLS:C2931767","MESH:C538197","DOID:0110552"],"synonyms":[{"name":"DFNA 22","type":"related"},{"name":"DFNA22","type":"narrow"},{"name":"MYO6 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 22","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 22","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in MYO6","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 22","type":"narrow"},{"name":"deafness, autosomal dominant 22","type":"narrow"},{"name":"deafness, autosomal dominant 22, with hypertrophic cardiomyopathy","type":"narrow"},{"name":"deafness, autosomal dominant nonsyndromic sensorineural 22","type":"narrow"},{"name":"deafness, autosomal dominant type 22","type":"narrow"}],"termid":"MONDO:0011660","xrefs":{"Monarch":{"xref_id":"0011660"}}}


id: PBO:0071626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 45","termid":"PBO:0071626"}


id: GO:0016185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Evagination of the presynaptic membrane, resulting in the formation of a new synaptic vesicle.","definition_xrefs":["GOC:curators","PMID:10099709","PMID:20448150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle budding","termid":"GO:0070142"},{"relation_name":"part_of","term_name":"synaptic vesicle endocytosis","termid":"GO:0048488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"synaptic vesicle budding from presynaptic endocytic zone membrane","synonyms":[{"name":"synaptic vesicle budding from pre-synaptic membrane","type":"exact"},{"name":"synaptic vesicle budding involved in synaptic vesicle endocytosis","type":"exact"}],"termid":"GO:0016185"}


id: PBO:0043720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B2","termid":"PBO:0043720"}


id: MONDO:0013808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maffucci syndrome is a very rare genetic bone and skin disorder characterized by multiple enchondromas, leading to bone deformities, combined with multiple dark, irregularly shaped hemangiomas or less commonly lymphangiomas.","definition_xrefs":["Orphanet:163634"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"vascular bone neoplasm","termid":"MONDO:0024499"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Maffucci syndrome","secondary_identifiers":["DOID:0060221","SCTID:46041001","GARD:6958","UMLS:C0024454","NCIT:C3213","NORD:1393","OMIM:614569","icd11.foundation:548780091","MEDGEN:7437"],"synonyms":[{"name":"Chondroplasia angiomatosis","type":"exact"},{"name":"Dyschondrodysplasia with hemangiomas","type":"related"},{"name":"Dyschondroplasia and cavernous hemangioma","type":"exact"},{"name":"Kast syndrome","type":"related"},{"name":"Maffucci syndrome","type":"exact"},{"name":"Maffucci type enchondromatosis","type":"exact"},{"name":"Maffucci's anomalad","type":"exact"},{"name":"chondrodysplasia with hemangioma","type":"exact"},{"name":"enchondromatosis with hemangiomata","type":"exact"},{"name":"enchondromatosis with multiple cavernous hemangiomas","type":"related"},{"name":"hemangiomata with Dyschondroplasia","type":"exact"},{"name":"hemangiomatosis Chondrodystrophica","type":"related"},{"name":"multiple Angiomas and Endochondromas","type":"related"},{"name":"multiple enchondromatosis, Maffucci type","type":"related"}],"termid":"MONDO:0013808","xrefs":{"Monarch":{"xref_id":"0013808"}}}


id: PBO:0049709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan synthase 3","termid":"PBO:0049709"}


id: PBO:0082403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of the mitochondrial processing protease (MPP); essential processing enzyme that cleaves the N-terminal targeting sequences from mitochondrially imported proteins","termid":"PBO:0082403"}


id: FYPO:0007160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the formation of nucleosomes on newly replicated DNA is abnormal.","definition_xrefs":["GO:0006335","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"abnormal DNA replication-dependent nucleosome assembly","synonyms":[{"name":"abnormal DNA replication-coupled nucleosome assembly","type":"exact"},{"name":"abnormal DNA replication-dependent nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"abnormal DNA replication-dependent nucleosome assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007160"}


id: MOD:00758
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to O4-(N-acetylamino)glucosyl-L-hydroxyproline.","definition_xrefs":["PubMed:15238247","PubMed:9660787","RESID:AA0390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"O4-(N-acetylamino)hexosyl-L-hydroxyproline","termid":"MOD:01677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O4-(N-acetylamino)glucosyl-L-hydroxyproline","synonyms":[{"name":"(2S,4R)-4-[2-acetamido-2-deoxy-alpha-D-glucopyranosyloxy]pyrrolidine-2-carboxylic acid","type":"exact"},{"name":"4-(N-acetylglucosaminyloxy)proline","type":"exact"},{"name":"4-[(2-N-acetylamino)-alpha-D-glucopyranosyl]oxyproline","type":"exact"},{"name":"CARBOHYD O-linked (GlcNAc) hydroxyproline","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O4-(N-acetylamino)glucosyl-L-hydroxyproline","type":"exact"},{"name":"O4-glycosyl-hydroxyproline","type":"exact"},{"name":"O4GlcNAcHyPro","type":"exact"},{"name":"alpha-2-(N-acetylamino)glucopyranosyl-4-hydroxyproline","type":"exact"}],"termid":"MOD:00758"}


id: GO:0097555
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It originates at the right anterior basal body, extends laterally through the cytoplasm, crosses the left anterior axoneme, and exits as a membrane-bound flagellum on the anterior right side of the cell.","definition_xrefs":["PMID:5961344","PMID:16607022","GOC:giardia","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right anterior flagellum","synonyms":[{"name":"right anterior cilium","type":"exact"}],"termid":"GO:0097555"}


id: PBO:0044759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 43","termid":"PBO:0044759"}


id: PBO:0067210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 275, pseudogene","termid":"PBO:0067210"}


id: PBO:0065572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin reductase 3","termid":"PBO:0065572"}


id: PBO:0041865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 10","termid":"PBO:0041865"}


id: GO:0043485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from endosomes to pigment granules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"part_of","term_name":"pigment granule maturation","termid":"GO:0048757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"endosome to pigment granule transport","termid":"GO:0043485"}


id: MONDO:0015561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aleukemic mast cell leukemia (obsolete MONDO:0015561)","termid":"MONDO:0015561","xrefs":{"Monarch":{"xref_id":"0015561"}}}


id: PBO:0059711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 19","termid":"PBO:0059711"}


id: PBO:0109080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3104","termid":"PBO:0109080"}


id: PBO:0068171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 478","termid":"PBO:0068171"}


id: GO:1902759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving Mo(VI)-molybdopterin cytosine dinucleotide.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","GOC:dph","PMID:23201473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor metabolic process","termid":"GO:0019720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Mo(VI)-molybdopterin cytosine dinucleotide metabolic process","synonyms":[{"name":"Mo(VI)-molybdopterin cytosine dinucleotide metabolism","type":"exact"}],"termid":"GO:1902759"}


id: PBO:0080094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uronyl 2-sulfotransferase","termid":"PBO:0080094"}


id: GO:0050676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of urothelial cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of urothelial cell proliferation","termid":"GO:0050675"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"negatively_regulates","term_name":"urothelial cell proliferation","termid":"GO:0050674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of urothelial cell proliferation","synonyms":[{"name":"down regulation of urothelial cell proliferation","type":"exact"},{"name":"down-regulation of urothelial cell proliferation","type":"exact"},{"name":"downregulation of urothelial cell proliferation","type":"exact"},{"name":"inhibition of urothelial cell proliferation","type":"narrow"}],"termid":"GO:0050676"}


id: PBO:0050196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 13","termid":"PBO:0050196"}


id: SO:0001315
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_acetyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_acetyladenosine","secondary_identifiers":["RNAMOD:102"],"synonyms":[{"name":"N6 acetyladenosine","type":"exact"},{"name":"N6-acetyladenosine","type":"exact"},{"name":"ac6A","type":"exact"}],"termid":"SO:0001315"}


id: PBO:0053273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor A6","termid":"PBO:0053273"}


id: PBO:0028488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitotic_index","termid":"PBO:0028488"}


id: MOD:01696
data:
  {"annotated_genes":["SJAG_00733","SJAG_02522"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[81050,80999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00050"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with an acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00733":null,"SJAG_02522":null},"genotype_count":0,"is_obsolete":false,"name":"alpha-amino acylated residue","references_by_uniquename":{"PMID:36408920":null},"termid":"MOD:01696","terms_by_termid":{"MOD:00050":null}}


id: MONDO:0012189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Amish infantile epilepsy syndrome (obsolete MONDO:0012189)","termid":"MONDO:0012189","xrefs":{"Monarch":{"xref_id":"0012189"}}}


id: PBO:0072367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 53","termid":"PBO:0072367"}


id: FYPO:0007200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches cluster together more than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:30201262","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggregated actin cortical patches during vegetative growth","termid":"FYPO:0005430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0004803","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"aggregated actin cortical patches during mitotic interphase","synonyms":[{"name":"actin cortical patch aggregation during mitotic interphase during vegetative growth","type":"related"},{"name":"aggregated F-actin patches during mitotic interphase","type":"exact"},{"name":"aggregated actin cortical patch distribution during mitotic interphase","type":"exact"},{"name":"aggregated actin cortical patch localisation during mitotic interphase","type":"exact"},{"name":"aggregated actin cortical patch localization during mitotic interphase","type":"exact"},{"name":"aggregated actin cortical patches during interphase of mitotic cell cycle","type":"exact"},{"name":"aggregated actin patches during mitotic interphase","type":"exact"}],"termid":"FYPO:0007200"}


id: MONDO:0009963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulbright-Hodes syndrome is characterized by renal dysplasia, growth retardation, phocomelia or mesomelia, radiohumeral fusion, rib abnormalities, anomalies of the external genitalia and a potter-like facies. The syndrome has been described in three infants (one pair of sibs and an unrelated case), all of whom died shortly after birth from respiratory distress resulting from pulmonary hypoplasia and oligohydramnios caused by renal dysplasia. The mode of transmission appears to be autosomal recessive.","definition_xrefs":["Orphanet:3404"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ulbright-Hodes syndrome","secondary_identifiers":["UMLS:C1849438","GARD:5394","SCTID:719840003","MESH:C537754","MEDGEN:376585","OMIM:266910"],"synonyms":[{"name":"RL syndrome","type":"related"},{"name":"Ulbright Hodes syndrome","type":"related"},{"name":"renal dysplasia limb defects syndrome","type":"related"},{"name":"renal dysplasia, mesomelia, and radiohumeral fusion","type":"related"},{"name":"renal dysplasia-limb defects syndrome","type":"exact"},{"name":"renal dysplasia-mesomelia-radiohumeral fusion syndrome","type":"exact"}],"termid":"MONDO:0009963","xrefs":{"Monarch":{"xref_id":"0009963"}}}


id: GO:0072187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a metanephric cap from unspecified parts. The metanephric cap is formed by the condensation of metanephric mesenchymal cells surrounding the ureteric bud tip.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"metanephric cap morphogenesis","termid":"GO:0072186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cap formation","termid":"GO:0072187"}


id: PATO:0000062
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sleep quality defined by the mathematic properties of the relative time frames of the sleep cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality of a process","termid":"PATO:0001530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sleep pattern","termid":"PATO:0000062"}


id: GO:0140944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl20-[histone H4] + S-adenosyl-L-methionine = H+ + N6-methyl-L-lysyl20-[histone H4] + S-adenosyl-L-homocysteine. This reaction is the addition of a methyl group to the unmethylated lysine residue at position 20 of histone H4, producing histone H4K20me.","definition_xrefs":["RHEA:60344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K20 methyltransferase activity","termid":"GO:0042799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0008276","GO:0016740","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"histone H4K20 monomethyltransferase activity","secondary_identifiers":["EC:2.1.1.361"],"synonyms":[{"name":"histone H4-K20 methylation","type":"broad"},{"name":"histone H4K20 methylase activity","type":"broad"},{"name":"histone H4K20 methylation","type":"broad"},{"name":"histone H4K20 monomethylation","type":"exact"},{"name":"histone lysine N-monomethyltransferase activity (H4-K20 specific)","type":"exact"}],"termid":"GO:0140944"}


id: PR:O13808
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glia maturation factor beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11249:SF0","OMA:SCHPO00830","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-depolymerizing factor gmf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.11","secondary_identifiers":["UniProtKB:O13808"],"synonyms":[{"name":"Spom972h-GMFB","type":"exact"},{"name":"glia maturation factor-like protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13808"}


id: PBO:0048018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRMPD4 antisense RNA 1","termid":"PBO:0048018"}


id: MONDO:0015498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"oromandibular-limb anomalies syndrome","secondary_identifiers":["GARD:19996","icd11.foundation:1868700139","MEDGEN:1842880","Orphanet:156215","UMLS:C5680663"],"termid":"MONDO:0015498","xrefs":{"Monarch":{"xref_id":"0015498"}}}


id: PBO:0016979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Adg1","termid":"PBO:0016979"}


id: MONDO:0017490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tibial hemimelia","termid":"MONDO:0010144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tibial hemimelia, unilateral","secondary_identifiers":["icd11.foundation:863808263","Orphanet:295077"],"synonyms":[{"name":"tibial longitudinal meromelia, unilateral","type":"exact"}],"termid":"MONDO:0017490","xrefs":{"Monarch":{"xref_id":"0017490"}}}


id: MONDO:0007454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus in which the cause of the disease is a mutation in the INS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 2","secondary_identifiers":["DOID:0110741","MEDGEN:377588","MESH:C565100","OMIM:125852","UMLS:C1852092"],"synonyms":[{"name":"IDDM2","type":"exact"},{"name":"INS type 1 diabetes mellitus","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 2","type":"related"},{"name":"diabetes mellitus, insulin-dependent, type 2","type":"exact"},{"name":"insulin-dependent diabetes mellitus 2","type":"exact"},{"name":"type 1 diabetes mellitus caused by mutation in INS","type":"exact"}],"termid":"MONDO:0007454","xrefs":{"Monarch":{"xref_id":"0007454"}}}


id: PBO:0048596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone inducible transmembrane protein","termid":"PBO:0048596"}


id: MONDO:0024389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaerobic bacteria infectious disease","secondary_identifiers":["MEDGEN:678527","ICD9:041.84","SCTID:423451008","UMLS:C0854328"],"synonyms":[{"name":"anaerobic bacterial infection","type":"exact"},{"name":"infection caused by anaerobic bacteria","type":"exact"},{"name":"infection due to anaerobic bacteria","type":"exact"}],"termid":"MONDO:0024389","xrefs":{"Monarch":{"xref_id":"0024389"}}}


id: PBO:0069298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 554, pseudogene","termid":"PBO:0069298"}


id: PBO:0003079
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of SAPK pathway","termid":"PBO:0003079"}


id: FYPO:0006369
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in one or more heterochromatin domains occurs to a greater extent than normal.","definition_xrefs":["PMID:29214404","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at heterochromatin domain during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at heterochromatin domain during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at heterochromatin domain during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation at heterochromatin domain during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at heterochromatin domain during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at heterochromatin domain during vegetative growth","type":"exact"}],"termid":"FYPO:0006369"}


id: GO:0097302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways by which diacylglyceryl transfer leads to formation of a water-soluble protein-lipid complex.","definition_xrefs":["GOC:pde","UniPathway:UPA00664","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein biosynthetic process via diacylglyceryl transfer (obsolete GO:0097302)","synonyms":[{"name":"lipoprotein biosynthesis (diacylglyceryl transfer)","type":"exact"}],"termid":"GO:0097302"}


id: PBO:0061044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 5","termid":"PBO:0061044"}


id: GO:0004856
data:
  {"annotated_genes":["SJAG_04276"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77477],"is_not":false,"summary":null,"term":"GO:0004856"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylulose + ATP = D-xylulose 5-phosphate + ADP + H+.","definition_xrefs":["RHEA:10964","EC:2.7.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-xylulokinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:XYLULOKIN-RXN","Reactome:R-HSA-5662466","KEGG_REACTION:R01639"],"synonyms":[{"name":"ATP:D-xylulose 5-phosphotransferase activity","type":"related"},{"name":"xylulokinase (phosphorylating)","type":"related"},{"name":"xylulokinase activity","type":"broad"},{"name":"xylulose kinase activity","type":"related"}],"termid":"GO:0004856","terms_by_termid":{"GO:0004856":null}}


id: PBO:0031498
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_alkalinity","termid":"PBO:0031498"}


id: PBO:0061423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)H quinone dehydrogenase 1","termid":"PBO:0061423"}


id: PBO:0034080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_sequentially_aligned_with","termid":"PBO:0034080"}


id: MONDO:0044267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gcy (obsolete MONDO:0044267)","secondary_identifiers":["HGNC:4211"],"synonyms":[{"name":"GCY","type":"related"},{"name":"growth control, Y-chromosome influenced","type":"related"},{"name":"stature","type":"related"},{"name":"tooth size","type":"related"}],"termid":"MONDO:0044267","xrefs":{"Monarch":{"xref_id":"0044267"}}}


id: PBO:0061702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUS1 pseudogene 2","termid":"PBO:0061702"}


id: MONDO:0018688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"anti-p200 pemphigoid","secondary_identifiers":["MEDGEN:1802806","GARD:21892","Orphanet:454710","UMLS:C5681099"],"termid":"MONDO:0018688","xrefs":{"Monarch":{"xref_id":"0018688"}}}


id: MONDO:1012604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease that occurs in pigs in which there is a buildup of GM2 gangliosides in tissues due to the lack of the enzyme hexosaminidase. It is characterised by progressive neuromuscular dysfunction and impaired growth from an early age.","definition_xrefs":["OMIA:000403-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, pig","termid":"MONDO:1010842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, pig","synonyms":[{"name":"gangliosidosis, GM2, generic, pig","type":"related"}],"termid":"MONDO:1012604","xrefs":{"Monarch":{"xref_id":"1012604"}}}


id: PBO:0047915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2)","termid":"PBO:0047915"}


id: PBO:0087196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA m5C methyltransferase; methylates cytosine at position 2278 of 25S rRNA while Nop2p methylates cytosine at position 2870; contains seven beta-strand methyltransferase motif; localized to the nucleolus; interacts with Trm112p; homolog of NSUN5A, a human gene which is deleted in Williams-Beuren Syndrome","termid":"PBO:0087196"}


id: GO:1900086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peptidyl-tyrosine autophosphorylation.","definition_xrefs":["GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein autophosphorylation","termid":"GO:0031954"},{"relation_name":"is_a","term_name":"positive regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050731"},{"relation_name":"is_a","term_name":"regulation of peptidyl-tyrosine autophosphorylation","termid":"GO:1900084"},{"relation_name":"positively_regulates","term_name":"peptidyl-tyrosine autophosphorylation","termid":"GO:0038083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-tyrosine autophosphorylation","synonyms":[{"name":"activation of peptidyl-tyrosine autophosphorylation","type":"narrow"},{"name":"activation of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"activation of tyrosine autophosphorylation","type":"narrow"},{"name":"positive regulation of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"positive regulation of tyrosine autophosphorylation","type":"exact"},{"name":"up regulation of peptidyl-tyrosine autophosphorylation","type":"exact"},{"name":"up regulation of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"up regulation of tyrosine autophosphorylation","type":"exact"},{"name":"up-regulation of peptidyl-tyrosine autophosphorylation","type":"exact"},{"name":"up-regulation of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"up-regulation of tyrosine autophosphorylation","type":"exact"},{"name":"upregulation of peptidyl-tyrosine autophosphorylation","type":"exact"},{"name":"upregulation of receptor tyrosine kinase autophosphorylation","type":"narrow"},{"name":"upregulation of tyrosine autophosphorylation","type":"exact"}],"termid":"GO:1900086"}


id: PBO:0028704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_damage_during_vegetative_growth","termid":"PBO:0028704"}


id: GO:0048841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axon extension involved in axon guidance.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon extension","termid":"GO:0030516"},{"relation_name":"regulates","term_name":"axon extension involved in axon guidance","termid":"GO:0048846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axon extension involved in axon guidance","termid":"GO:0048841"}


id: PBO:0065605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTOV1 pseudogene 1","termid":"PBO:0065605"}


id: FYPO:0005115
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated and has an abnormal shape featuring a constriction at the center of the cell, corresponding to the cell division site. In some such cells, the diameter at the ends is much greater than in wild-type cells.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"elongated vegetative cell with central constriction","synonyms":[{"name":"cell morphology, elongated dumbbell","type":"related"},{"name":"cell morphology, long dumbbell","type":"related"},{"name":"elongated cell with central constriction during mitotic cell cycle","type":"related"},{"name":"elongated cell with central constriction during vegetative growth","type":"exact"},{"name":"elongated dumbbell morphology","type":"related"},{"name":"elongated dumbbell-shaped vegetative cell","type":"related"},{"name":"elongated swollen vegetative cell with constricted region at cell division site","type":"exact"}],"termid":"FYPO:0005115"}


id: MONDO:0017642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-microcephaly-phalangeal-facial abnormalities syndrome","secondary_identifiers":["Orphanet:3067"],"termid":"MONDO:0017642","xrefs":{"Monarch":{"xref_id":"0017642"}}}


id: PBO:0042170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 1","termid":"PBO:0042170"}


id: PBO:0079762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-fold modifier conjugating enzyme 1","termid":"PBO:0079762"}


id: PBO:0054754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2165","termid":"PBO:0054754"}


id: PBO:0027190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_medial_cortical_node,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0027190"}


id: PBO:0003766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin, nuclear import receptor Mtr10 (predicted)","termid":"PBO:0003766"}


id: PBO:0112605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein, implicated in transmembrane transport or endocytosis","termid":"PBO:0112605"}


id: GO:0019351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dethiobiotin, a derivative of biotin in which the sulfur atom has been replaced by two hydrogen atoms.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"dethiobiotin metabolic process","termid":"GO:0046450"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dethiobiotin biosynthetic process","synonyms":[{"name":"desthiobiotin biosynthesis","type":"exact"},{"name":"desthiobiotin biosynthetic process","type":"exact"},{"name":"dethiobiotin anabolism","type":"exact"},{"name":"dethiobiotin biosynthesis","type":"exact"},{"name":"dethiobiotin formation","type":"exact"},{"name":"dethiobiotin synthesis","type":"exact"}],"termid":"GO:0019351"}


id: GO:1905617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of miRNA-mediated gene silencing by inhibition of translation.","definition_xrefs":["GOC:PARL","GOC:bc","GO_REF:0000058","GOC:TermGenie","PMID:23409027"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of miRNA-mediated gene silencing by inhibition of translation (obsolete GO:1905617)","synonyms":[{"name":"down regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"down regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"down regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"down regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"down regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"down-regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down-regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down-regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"down-regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"down-regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"down-regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"down-regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"down-regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"downregulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"downregulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"downregulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"downregulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"downregulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"downregulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"downregulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"downregulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"},{"name":"inhibition of down regulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"inhibition of down-regulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"inhibition of downregulation of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"inhibition of gene silencing by miRNA, negative regulation of translation","type":"narrow"},{"name":"inhibition of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"inhibition of miRNA mediated inhibition of translation","type":"narrow"},{"name":"inhibition of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"inhibition of negative regulation of translation involved in gene silencing by microRNA","type":"narrow"},{"name":"negative regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"negative regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"negative regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"negative regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"negative regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"negative regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"negative regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"negative regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:1905617"}


id: GO:0007297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an ovarian follicle cell that takes place during oogenesis. During egg chamber formation, follicle cells migrate to envelop the germ-line cysts and move in between cysts. At stage 10B, follicle cells migrate centripetally between the nurse cells and the oocyte, enclosing the anterior of the egg. An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:10822261","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"},{"relation_name":"part_of","term_name":"follicle cell of egg chamber development","termid":"GO:0030707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicle cell of egg chamber migration","synonyms":[{"name":"follicle cell migration","type":"broad"}],"termid":"GO:0007297"}


id: MONDO:0006865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infectious process affecting the gums. It is characterized by the development of necrotic, ulcerated, and painful lesions with creation of pseudomembranes extending along the gingival margins.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingivitis","termid":"MONDO:0002508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotizing ulcerative gingivitis","secondary_identifiers":["NCIT:C34637","SCTID:186963008","MESH:D005892","ICD9:101","UMLS:C0017575","EFO:1001058","DOID:13924","MEDGEN:42219"],"synonyms":[{"name":"ANUG","type":"exact"},{"name":"Fusospirillary gingivitis","type":"related"},{"name":"Fusospirillosis","type":"related"},{"name":"Vincent angina","type":"exact"},{"name":"Vincent's angina","type":"exact"},{"name":"Vincent's angina - pharyngitis","type":"exact"},{"name":"Vincent's disease","type":"exact"},{"name":"Vincent's gingivitis","type":"related"},{"name":"Vincent's infection","type":"related"},{"name":"Vincent's infection, any site","type":"exact"},{"name":"Vincent's stomatitis","type":"related"},{"name":"acute membranous gingivitis","type":"related"},{"name":"acute necrotising ulcerative gingivitis","type":"exact"},{"name":"acute necrotising ulcerative gingivitis [ambiguous]","type":"exact"},{"name":"acute necrotising ulcerative gingivostomatitis","type":"exact"},{"name":"acute necrotising ulcerative gingivostomatitis [ambiguous]","type":"exact"},{"name":"acute necrotizing ulcerative gingivitis","type":"exact"},{"name":"acute necrotizing ulcerative gingivostomatitis","type":"exact"},{"name":"acute ulceromembranous gingivitis","type":"exact"},{"name":"angina - Vincents","type":"exact"},{"name":"early acute necrotising gingivitis","type":"exact"},{"name":"phagedenic gingivitis","type":"related"},{"name":"trench mouth","type":"exact"}],"termid":"MONDO:0006865","xrefs":{"Monarch":{"xref_id":"0006865"}}}


id: GO:0035801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the adrenal cortex over time, from its formation to the mature structure. The adrenal cortex is located at the periphery of the adrenal gland and controls glucose and electrolyte metabolism, response to stress and sexual development through the production of different classes of steroid hormones (glucocorticoids, mineralocorticoids and androgens).","definition_xrefs":["PMID:12185666","Wikipedia:Adrenal_cortex","PMID:21115154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"adrenal gland development","termid":"GO:0030325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adrenal cortex development","synonyms":[{"name":"adrenal gland cortex development","type":"exact"}],"termid":"GO:0035801"}


id: PBO:0003504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S17 (predicted)","termid":"PBO:0003504"}


id: MONDO:0014974
data:
  {"annotated_genes":["SJAG_01875","SJAG_02679"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87314,87315],"is_not":false,"summary":null,"term":"MONDO:0014974"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01875":null,"SJAG_02679":null},"genotype_count":0,"is_obsolete":false,"name":"sudden cardiac failure, alcohol-induced","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617223","UMLS:C4310663","MEDGEN:934630"],"synonyms":[{"name":"SCFAI","type":"exact"},{"name":"sudden Cardiac failure, alcohol-induced","type":"exact"},{"name":"sudden cardiac failure, alcohol-induced; SCFAI","type":"exact"}],"termid":"MONDO:0014974","terms_by_termid":{"MONDO:0014974":null},"xrefs":{"Monarch":{"xref_id":"0014974"}}}


id: PBO:0012036
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPCC663.03, pmd1 is more closely related to S. cerevisiae STE6","termid":"PBO:0012036"}


id: PBO:0041987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 30","termid":"PBO:0041987"}


id: GO:0097145
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oligomeric protein complex consisting of BAK, a member of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BAK complex","termid":"GO:0097145"}


id: PBO:0066317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPMS2 pseudogene 1","termid":"PBO:0066317"}


id: PBO:0071375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 34","termid":"PBO:0071375"}


id: PBO:0074043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A25 antisense RNA 1","termid":"PBO:0074043"}


id: PBO:0040789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional apoptosis regulator","termid":"PBO:0040789"}


id: PBO:0084806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; MLO1 is not an essential gene","termid":"PBO:0084806"}


id: PBO:0049915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEXIM2 antisense RNA 1","termid":"PBO:0049915"}


id: PBO:0068584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 35, pseudogene","termid":"PBO:0068584"}


id: MONDO:0003463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm of the ovary characterized by the presence of glandular structures with endometrial-type well-differentiated cells in a fibrotic stroma.","definition_xrefs":["NCIT:C27287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian endometrioid adenofibroma","secondary_identifiers":["ICDO:8381/0","UMLS:C2212024","ICDO:8380/0","DOID:5480","MEDGEN:389179"],"synonyms":[{"name":"ovarian endometrioid adenofibroma","type":"exact"}],"termid":"MONDO:0003463","xrefs":{"Monarch":{"xref_id":"0003463"}}}


id: GO:0033525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ester derivates of sinapate, (2E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"sinapate ester metabolic process","termid":"GO:0033524"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"sinapate ester biosynthetic process","secondary_identifiers":["MetaCyc:PWY-3301"],"synonyms":[{"name":"sinapate ester anabolism","type":"exact"},{"name":"sinapate ester biosynthesis","type":"exact"},{"name":"sinapate ester formation","type":"exact"},{"name":"sinapate ester synthesis","type":"exact"}],"termid":"GO:0033525"}


id: PBO:0076787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans-2,3-enoyl-CoA reductase pseudogene 1","termid":"PBO:0076787"}


id: FYPO:0005116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is localized to discrete regions in the nucleus, visible as foci or dots by microscopy, to a greater extent observed than in normal (wild type) cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased punctate nuclear protein localization","synonyms":[{"name":"increased protein localization to nuclear puncta","type":"exact"},{"name":"increased punctate nuclear protein localisation","type":"exact"},{"name":"increased punctate nuclear protein localization during mitotic cell cycle","type":"related"},{"name":"increased punctate nuclear protein localization during vegetative growth","type":"exact"}],"termid":"FYPO:0005116"}


id: MONDO:0019452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This subgroup of myeloproliferative neoplasms includes cases which do not meet the morphologic criteria of any of the defined myeloproliferative neoplasms, or which have characteristics that overlap at least two of the myeloproliferative neoplasms.","definition_xrefs":["NCIT:C27350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"myeloproliferative neoplasm, unclassifiable","secondary_identifiers":["GARD:16764","ICDO:9975/3","Orphanet:86830","UMLS:C1333046","MEDGEN:232365"],"synonyms":[{"name":"CMPD, U","type":"exact"},{"name":"CMPD-U","type":"exact"},{"name":"MPN, U","type":"exact"},{"name":"MPN-U","type":"exact"},{"name":"chronic myeloproliferative disease, unclassifiable","type":"exact"},{"name":"chronic myeloproliferative disorder, unclassifiable","type":"exact"},{"name":"myeloproliferative neoplasm, unclassifiable","type":"exact"},{"name":"unclassifiable chronic myeloproliferative disease","type":"exact"},{"name":"unclassifiable chronic myeloproliferative disorder","type":"exact"},{"name":"undifferentiated myeloproliferative disease","type":"exact"}],"termid":"MONDO:0019452","xrefs":{"Monarch":{"xref_id":"0019452"}}}


id: PBO:0056076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 6 family member G6F","termid":"PBO:0056076"}


id: MONDO:0011137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the ABCA4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"ABCA4-related retinopathy","termid":"MONDO:0800406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 19","secondary_identifiers":["MESH:C566637","ICD10CM:H35.5","OMIM:601718","GARD:10398","DOID:0110354","UMLS:C1866422","MEDGEN:400996"],"synonyms":[{"name":"ABCA4 retinitis pigmentosa","type":"exact"},{"name":"RP 19","type":"related"},{"name":"RP19","type":"exact"},{"name":"retinitis pigmentosa 19","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in ABCA4","type":"exact"},{"name":"retinitis pigmentosa type 19","type":"exact"}],"termid":"MONDO:0011137","xrefs":{"Monarch":{"xref_id":"0011137"}}}


id: PBO:0113211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein, ERMES complex subunit; required for transmission of mitochondria to daughter cells; required for mitophagy; may influence import and assembly of outer membrane beta-barrel proteins; localizes to mitochondria–ER contact sites; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0113211"}


id: PBO:0069929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1222, pseudogene","termid":"PBO:0069929"}


id: PR:O13853
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- its3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-phosphate 5-kinase its3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.14","synonyms":[{"name":"1-phosphatidylinositol 4-phosphate kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PIP5K (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns(4)P-5-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-its3","type":"exact"},{"name":"diphosphoinositide kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13853"}


id: PBO:0047255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 240 member C","termid":"PBO:0047255"}


id: MONDO:0958274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atrophic papulosis","termid":"MONDO:0958110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"benign atrophic papulosis","secondary_identifiers":["UMLS:C5891170","MEDGEN:1864041","Orphanet:656085"],"termid":"MONDO:0958274","xrefs":{"Monarch":{"xref_id":"0958274"}}}


id: FYPO:0001164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing glucose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002060","FYPO:0002057","FYPO:0000139","FYPO:0002058","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on glucose carbon source","synonyms":[{"name":"normal cell population growth on glucose carbon source","type":"exact"},{"name":"normal vegetative cell population growth on dextrose carbon source","type":"exact"},{"name":"normal vegetative cell population growth on glucose carbon source","type":"exact"}],"termid":"FYPO:0001164"}


id: PBO:0066064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association (RalGDS/AF-6) and pleckstrin homology domains 1","termid":"PBO:0066064"}


id: PBO:0026839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_at_replication_origin","termid":"PBO:0026839"}


id: GO:0070460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of thyroid-stimulating hormone, a peptide hormone that stimulates the activity of the thyroid gland, from secretory granules in the anterior pituitary.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"thyroid-stimulating hormone secretion","synonyms":[{"name":"TSH secretion","type":"exact"},{"name":"thyroid stimulating hormone secretion","type":"exact"}],"termid":"GO:0070460"}


id: PBO:0036369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helper of TIM Hot13 (predicted)","termid":"PBO:0036369"}


id: GO:0080008
data:
  {"annotated_genes":["SJAG_03454","SJAG_04087","SJAG_01480","SJAG_00756","SJAG_01540","SJAG_03130","SJAG_04574","SJAG_03417","SJAG_00341","SJAG_04540","SJAG_03680","SJAG_02119","SJAG_01573"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71245,76474,91187,91235,97010,105695],"is_not":false,"summary":null,"term":"GO:0080008"},{"annotations":[118082,119209,114364,94674,97051,110851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[70436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031464"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul4 family and a RING domain protein form the catalytic core; substrate specificity is conferred by an adaptor protein.","definition_xrefs":["PMID:16792691","PMID:18552200","PMID:18223036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_00756":null,"SJAG_01480":null,"SJAG_01540":null,"SJAG_01573":null,"SJAG_02119":null,"SJAG_03130":null,"SJAG_03417":null,"SJAG_03454":null,"SJAG_03680":null,"SJAG_04087":null,"SJAG_04540":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Cul4-RING E3 ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0080008","terms_by_termid":{"GO:0031464":null,"GO:0043494":null,"GO:0080008":null}}


id: PBO:0072854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretion associated Ras related GTPase 1A pseudogene 4","termid":"PBO:0072854"}


id: GO:1902653
data:
  {"annotated_genes":["SJAG_01474","SJAG_00413","SJAG_03235","SJAG_03024","SJAG_04499","SJAG_03509","SJAG_03249","SJAG_04018","SJAG_00453","SJAG_03715","SJAG_03750","SJAG_02855","SJAG_01307","SJAG_00717","SJAG_00370","SJAG_02982","SJAG_03598","SJAG_04217","SJAG_04270","SJAG_03018","SJAG_04810","SJAG_00770","SJAG_03531","SJAG_00624","SJAG_03929","SJAG_02719","SJAG_02104","SJAG_02044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76530,71297,72123,107893,109614,70257,88796,80281,115619,73519,80641,71928,116933,65973,74692,76588,89984,94967,74335,77554,108206,110456,76615,80654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006696"},{"annotations":[94211],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010895"},{"annotations":[110222],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0070452"},{"annotations":[75891],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045540"},{"annotations":[106197,88886],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of secondary alcohol.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","PMID:11288200","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00370":null,"SJAG_00413":null,"SJAG_00453":null,"SJAG_00624":null,"SJAG_00717":null,"SJAG_00770":null,"SJAG_01307":null,"SJAG_01474":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02719":null,"SJAG_02855":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03235":null,"SJAG_03249":null,"SJAG_03509":null,"SJAG_03531":null,"SJAG_03598":null,"SJAG_03715":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04018":null,"SJAG_04217":null,"SJAG_04270":null,"SJAG_04499":null,"SJAG_04810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"secondary alcohol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"secondary alcohol anabolism","type":"exact"},{"name":"secondary alcohol biosynthesis","type":"exact"},{"name":"secondary alcohol formation","type":"exact"},{"name":"secondary alcohol synthesis","type":"exact"}],"termid":"GO:1902653","terms_by_termid":{"GO:0006696":null,"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null}}


id: PBO:0061720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT family member 2E","termid":"PBO:0061720"}


id: MONDO:0009925
data:
  {"annotated_genes":["SJAG_05213","SJAG_03785","SJAG_01344"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85505,85506,85507],"is_not":false,"summary":null,"term":"MONDO:0009925"}]},"cv_name":"mondo","definition":"An autosomal recessive form of PXE.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"},{"relation_name":"excluded_subClassOf","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"excluded_subClassOf","term_name":"pseudoxanthoma elasticum (inherited or acquired)","termid":"MONDO:0024308"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"inherited pseudoxanthoma elasticum","termid":"MONDO:0100091"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03785":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive inherited pseudoxanthoma elasticum","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2738","SCTID:72744008","SCTID:402782006","NCIT:C85036","MESH:D011561","MedDRA:10037150","OMIM:264800","UMLS:C1275116","SCTID:239140003","Orphanet:758","ICD9:757.39","icd11.foundation:1516160852","MEDGEN:698415"],"synonyms":[{"name":"AR inherited pseudoxanthoma elasticum","type":"exact"},{"name":"Gronblad Strandberg syndrome","type":"related"},{"name":"Gronblad-Strandberg syndrome","type":"exact"},{"name":"Gronblad-Strandberg-Touraine syndrome","type":"exact"},{"name":"PXE","type":"exact"},{"name":"PXE, modifier of severity of","type":"related"},{"name":"Pseudoxanthoma Elasticum","type":"exact"},{"name":"pseudoxanthoma elasticum","type":"related"},{"name":"pseudoxanthoma elasticum, modifier of severity of","type":"related"}],"termid":"MONDO:0009925","terms_by_termid":{"MONDO:0009925":null},"xrefs":{"Monarch":{"xref_id":"0009925"}}}


id: GO:0034808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzo(a)pyrene + O2 = benzo(a)pyrene-cis-4,5-dihydrodiol.","definition_xrefs":["UM-BBD_reactionID:r1126"],"gene_count":0,"genotype_count":0,"name":"obsolete benzo(a)pyrene 4,5-dioxygenase activity (obsolete GO:0034808)","termid":"GO:0034808"}


id: PBO:0040395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit E1 pseudogene 3","termid":"PBO:0040395"}


id: PBO:0038780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activin A receptor type 2B","termid":"PBO:0038780"}


id: PBO:0030757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_amphotericin_B","termid":"PBO:0030757"}


id: GO:1905863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an invadopodium.","definition_xrefs":["GOC:TermGenie","PMID:15684033"],"gene_count":0,"genotype_count":0,"name":"obsolete invadopodium organization (obsolete GO:1905863)","termid":"GO:1905863"}


id: GO:0061002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron projection development","termid":"GO:0010977"},{"relation_name":"is_a","term_name":"negative regulation of dendritic spine development","termid":"GO:0061000"},{"relation_name":"is_a","term_name":"regulation of dendritic spine morphogenesis","termid":"GO:0061001"},{"relation_name":"negatively_regulates","term_name":"dendritic spine morphogenesis","termid":"GO:0060997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic spine morphogenesis","termid":"GO:0061002"}


id: PBO:0016111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase MRP subunit Rpp21 (predicted)","termid":"PBO:0016111"}


id: GO:2000652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary cell wall biogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"is_a","term_name":"regulation of cell wall organization or biogenesis","termid":"GO:1903338"},{"relation_name":"regulates","term_name":"plant-type secondary cell wall biogenesis","termid":"GO:0009834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of secondary cell wall biogenesis","synonyms":[{"name":"regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"regulation of secondary cell wall anabolism","type":"related"},{"name":"regulation of secondary cell wall biosynthetic process","type":"related"},{"name":"regulation of secondary cell wall formation","type":"related"},{"name":"regulation of secondary cell wall synthesis","type":"related"}],"termid":"GO:2000652"}


id: MONDO:0019963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine neoplasm that involves the bronchus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchial neoplasm","termid":"MONDO:0002807"},{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchial endocrine tumor","secondary_identifiers":["Orphanet:97287","GARD:19360"],"synonyms":[{"name":"bronchial NET","type":"exact"},{"name":"bronchial neuroendocrine tumor","type":"related"},{"name":"bronchial neuroendocrine tumour","type":"related"},{"name":"bronchus NET","type":"exact"},{"name":"bronchus neuroendocrine neoplasm","type":"exact"},{"name":"bronchus neuroendocrine tumor","type":"exact"},{"name":"bronchus neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"bronchus neuroendocrine tumour","type":"exact"},{"name":"neuroendocrine neoplasm of bronchus","type":"exact"}],"termid":"MONDO:0019963","xrefs":{"Monarch":{"xref_id":"0019963"}}}


id: PBO:0054801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2214","termid":"PBO:0054801"}


id: PBO:0076223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT4 homolog, DSIF elongation factor subunit pseudogene 2","termid":"PBO:0076223"}


id: PBO:0070415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated protein 1","termid":"PBO:0070415"}


id: FYPO:0003136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain more plasma membrane than normal. Excess plasma membrane may appear as bubble-like structures inside the cell, and may be concentrated in the mating projection during conjugation.","definition_xrefs":["PMID:19627505","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"excess plasma membrane present","synonyms":[{"name":"excess mating projection membrane present","type":"narrow"},{"name":"excess plasma membrane present during mitotic cell cycle","type":"related"},{"name":"excess plasma membrane present during vegetative growth","type":"exact"},{"name":"increased invagination of the plasma membrane","type":"narrow"},{"name":"internal membrane bubbles present","type":"related"}],"termid":"FYPO:0003136"}


id: GO:1900272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of long-term synaptic potentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of long-term synaptic potentiation","termid":"GO:1900271"},{"relation_name":"negatively_regulates","term_name":"long-term synaptic potentiation","termid":"GO:0060291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of long-term synaptic potentiation","synonyms":[{"name":"down regulation of LTP","type":"related"},{"name":"down regulation of long-term potentiation","type":"broad"},{"name":"down regulation of long-term synaptic potentiation","type":"exact"},{"name":"down-regulation of LTP","type":"related"},{"name":"down-regulation of long-term potentiation","type":"broad"},{"name":"down-regulation of long-term synaptic potentiation","type":"exact"},{"name":"downregulation of LTP","type":"related"},{"name":"downregulation of long-term potentiation","type":"broad"},{"name":"downregulation of long-term synaptic potentiation","type":"exact"},{"name":"inhibition of LTP","type":"related"},{"name":"inhibition of long-term potentiation","type":"broad"},{"name":"inhibition of long-term synaptic potentiation","type":"narrow"},{"name":"negative regulation of LTP","type":"related"},{"name":"negative regulation of long-term potentiation","type":"broad"}],"termid":"GO:1900272"}


id: PR:Q9UUM6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC405.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUM6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C405.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.02c","synonyms":[{"name":"Spom972h-SPBC405.02c","type":"exact"}],"termid":"PR:Q9UUM6"}


id: GO:1990067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of DNA recombination occurring within a single chromosome.","definition_xrefs":["PMID:7748165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"intrachromosomal DNA recombination","synonyms":[{"name":"intrastrand DNA recombination","type":"exact"}],"termid":"GO:1990067"}


id: PBO:0041745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMTA1 antisense RNA 2","termid":"PBO:0041745"}


id: PBO:0027387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_in_stationary_phase","termid":"PBO:0027387"}


id: PBO:0054413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1809","termid":"PBO:0054413"}


id: MONDO:0010056
data:
  {"annotated_genes":["SJAG_03894"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86541],"is_not":false,"summary":null,"term":"MONDO:0010056"}]},"cv_name":"mondo","definition":"Proximal spinal muscular atrophy type 4 (SMA4) is the adult-onset form of proximal spinal muscular atrophy characterized by muscle weakness and hypotonia resulting from the degeneration and loss of the lower motor neurons in the spinal cord and the brain stem nuclei.","definition_xrefs":["Orphanet:83420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal spinal muscular atrophy","termid":"MONDO:0019079"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03894":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"spinal muscular atrophy, type IV","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:335.19","UMLS:C1838230","MEDGEN:325364","DOID:0050529","MESH:C563948","GARD:564","icd11.foundation:443229384","NANDO:1200007","OMIM:271150","SCTID:85505000"],"synonyms":[{"name":"SMA 4","type":"related"},{"name":"SMA type 4","type":"exact"},{"name":"SMA type IV","type":"exact"},{"name":"SMA-IV","type":"exact"},{"name":"SMA4","type":"exact"},{"name":"adult spinal muscular atrophy","type":"exact"},{"name":"adult-onset spinal muscular atrophy","type":"related"},{"name":"proximal spinal muscular atrophy type 4","type":"related"},{"name":"spinal muscular atrophy 4","type":"related"},{"name":"spinal muscular atrophy of adults","type":"exact"},{"name":"spinal muscular atrophy type 4","type":"related"},{"name":"spinal muscular atrophy, adult form","type":"exact"},{"name":"spinal muscular atrophy, proximal, adult, autosomal recessive","type":"related"},{"name":"spinal muscular atrophy, type 4","type":"related"},{"name":"spinal muscular atrophy, type IV","type":"exact"},{"name":"spinal muscular atrophy-4","type":"exact"}],"termid":"MONDO:0010056","terms_by_termid":{"MONDO:0010056":null},"xrefs":{"Monarch":{"xref_id":"0010056"}}}


id: PBO:0110427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP10 pseudogene 2","termid":"PBO:0110427"}


id: GO:0044610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of flavine mononucleotide (FMN) from one side of a membrane to the other.","definition_xrefs":["GOC:ans","PMID:22185573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"FMN transmembrane transporter activity","synonyms":[{"name":"flavine mononucleotide transmembrane transporter activity","type":"exact"}],"termid":"GO:0044610"}


id: PBO:0091849
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CLA4","termid":"PBO:0091849"}


id: FYPO:0000876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000866"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000876"}


id: GO:0050345
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-2,3-epoxysuccinate + H2O = (2R,3S)-tartrate.","definition_xrefs":["EC:3.3.2.4","RHEA:20740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether hydrolase activity","termid":"GO:0016803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trans-epoxysuccinate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R02547","MetaCyc:TRANS-EPOXYSUCCINATE-HYDROLASE-RXN"],"synonyms":[{"name":"tartrate epoxydase activity","type":"related"},{"name":"trans-2,3-epoxysuccinate hydrolase activity","type":"related"},{"name":"trans-epoxysuccinate hydratase activity","type":"related"}],"termid":"GO:0050345"}


id: GO:0070321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the frequency, rate or extent of translation as a result of a stimulus indicating deprivation of nitrogen.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of translation in response to nitrogen starvation (obsolete GO:0070321)","termid":"GO:0070321"}


id: GO:0051167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-xylulose 5-phosphate, a derivative of the ketopentose xylulose phosphorylated at the 5 carbon; it is an intermediate in the pentose phosphate pathway.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-xylulose 5-phosphate metabolic process","synonyms":[{"name":"D-xylulose 5-phosphate metabolism","type":"exact"},{"name":"D-xylulose-5-phosphate metabolic process","type":"exact"},{"name":"D-xylulose-5-phosphate metabolism","type":"exact"},{"name":"xylulose 5-phosphate metabolic process","type":"exact"},{"name":"xylulose 5-phosphate metabolism","type":"exact"},{"name":"xylulose-5-phosphate metabolic process","type":"exact"},{"name":"xylulose-5-phosphate metabolism","type":"exact"}],"termid":"GO:0051167"}


id: PBO:0027414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_m7G(5')pppN_diphosphatase_activity","termid":"PBO:0027414"}


id: PBO:0088045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p; functions as a general positive regulator of Cdc34p activity; nuclear protein that may represent a link between nucleocytoplasmic transport and ubiquitin ligase activity","termid":"PBO:0088045"}


id: PBO:0108959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_deletion_and_mutation","termid":"PBO:0108959"}


id: PBO:0029257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029257"}


id: PBO:0039028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 4","termid":"PBO:0039028"}


id: PBO:0084201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG-CoA reductase; catalyzes conversion of HMG-CoA to mevalonate, which is a rate-limiting step in sterol biosynthesis; one of two isozymes; localizes to nuclear envelope; overproduction induces formation of karmellae; forms foci at nuclear periphery upon DNA replication stress; HMG1 has a paralog, HMG2, that arose from the whole genome duplication; human homolog HMGCR can complement yeast hmg1 mutant","termid":"PBO:0084201"}


id: PBO:0085678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in producing mature rRNAs and snoRNAs; involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis; component of the small subunit processome complex, which is required for processing of pre-18S rRNA","termid":"PBO:0085678"}


id: PBO:0000801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Esc1 (predicted)","termid":"PBO:0000801"}


id: SO:0001300
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_isopentenyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_isopentenyladenosine","secondary_identifiers":["RNAMOD:006"],"synonyms":[{"name":"N6 isopentenyladenosine","type":"exact"},{"name":"N6-isopentenyladenosine","type":"exact"},{"name":"i6A","type":"exact"}],"termid":"SO:0001300"}


id: GO:0003072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The renal process that modulates the force with which blood travels through the circulatory system, by impeding blood flow through the peripheral vasculature.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process involved in regulation of systemic arterial blood pressure","termid":"GO:0003071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal control of peripheral vascular resistance involved in regulation of systemic arterial blood pressure","synonyms":[{"name":"regulation of systemic arterial blood pressure by renal control of peripheral vascular resistance","type":"exact"},{"name":"renal regulation of systemic arterial blood pressure by control of peripheral vascular resistance","type":"exact"}],"termid":"GO:0003072"}


id: MONDO:0025086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary disease of the hip joints in dogs. Signs of the disease may be evident any time after 4 weeks of age.","definition_xrefs":["MESH:D006619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dog disease","termid":"MONDO:0024919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hip dysplasia, canine","synonyms":[{"name":"canine hip dysplasia","type":"related"},{"name":"dysplasia, canine hip","type":"related"}],"termid":"MONDO:0025086","xrefs":{"Monarch":{"xref_id":"0025086"}}}


id: MONDO:0012204
data:
  {"annotated_genes":["SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85637],"is_not":false,"summary":null,"term":"MONDO:0012204"}]},"cv_name":"mondo","definition":"An inherited, mild, non-hemolytic subtype of hereditary stomatocytosis that is associated with a temperature-dependent anomaly in red cell membrane permeability to potassium that leads to high in vitro potassium levels in samples stored below 37°C. FP is not associated with additional hematological abnormalities, although affected individuals may show some mild abnormalities like macrocytosis.","definition_xrefs":["Orphanet:90044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"hereditary stomatocytosis","termid":"MONDO:0020102"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"familial pseudohyperkalemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:717254007","MEDGEN:324588","UMLS:C1836705","GARD:16785","MESH:C563785","icd11.foundation:1653996588","OMIM:609153"],"synonyms":[{"name":"PSHK2","type":"exact"},{"name":"cryohydrocytosis, mild","type":"related"},{"name":"pseudohyperkalemia Chiswick","type":"related"},{"name":"pseudohyperkalemia East London","type":"related"},{"name":"pseudohyperkalemia Falkirk","type":"related"},{"name":"pseudohyperkalemia Lille","type":"related"},{"name":"pseudohyperkalemia, familial, 2, due to red cell leak","type":"exact"}],"termid":"MONDO:0012204","terms_by_termid":{"MONDO:0012204":null},"xrefs":{"Monarch":{"xref_id":"0012204"}}}


id: PBO:0080842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 6","termid":"PBO:0080842"}


id: GO:0075171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its MAP kinase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of MAP kinase-mediated signal transduction in response to host (obsolete GO:0075171)","synonyms":[{"name":"regulation of symbiont MAP kinase-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075171"}


id: PR:P87315
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hip3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone transcription regulator 3 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.14c","synonyms":[{"name":"Spom972h-hip3","type":"exact"}],"termid":"PR:P87315"}


id: MONDO:0010953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi anemia caused by mutations of the FANCE gene. This is a protein coding gene. It is required for the nuclear accumulation of FANCC and provides a critical bridge between the FA complex and FANCD2.","definition_xrefs":["NCIT:C125709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005046","MONDO:0005066","MONDO:0021190","MONDO:0005570"],"is_obsolete":false,"name":"Fanconi anemia complementation group E","secondary_identifiers":["MEDGEN:463628","DOID:0111084","GARD:15324","UMLS:C3160739","OMIM:600901"],"synonyms":[{"name":"FACE","type":"exact"},{"name":"FANCE","type":"exact"},{"name":"FANCE Fanconi anaemia","type":"exact"},{"name":"FANCE Fanconi anemia","type":"exact"},{"name":"Fanconi Anemia, complementation group type E","type":"exact"},{"name":"Fanconi anaemia caused by mutation in FANCE","type":"exact"},{"name":"Fanconi anaemia complementation group type E","type":"exact"},{"name":"Fanconi anemia caused by mutation in FANCE","type":"exact"},{"name":"Fanconi anemia complementation group E","type":"exact"},{"name":"Fanconi anemia complementation group type E","type":"exact"},{"name":"Fanconi anemia, complementation group E","type":"related"},{"name":"face","type":"exact"}],"termid":"MONDO:0010953","xrefs":{"Monarch":{"xref_id":"0010953"}}}


id: GO:0031359
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the chloroplast outer membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of chloroplast outer membrane (obsolete GO:0031359)","synonyms":[{"name":"integral to chloroplast outer membrane","type":"narrow"}],"termid":"GO:0031359"}


id: FYPO:0008391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H4 measured in the cell is higher than normal.","definition_xrefs":["PMID:39878217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased level of histone H4 in cell","termid":"FYPO:0008391"}


id: GO:1904140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microglial cell migration.","definition_xrefs":["GO_REF:0000058","GOC:nc","GOC:TermGenie","GOC:BHF","PMID:19100238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glial cell migration","termid":"GO:1903976"},{"relation_name":"is_a","term_name":"regulation of microglial cell migration","termid":"GO:1904139"},{"relation_name":"is_a","term_name":"negative regulation of macrophage migration","termid":"GO:1905522"},{"relation_name":"negatively_regulates","term_name":"microglial cell migration","termid":"GO:1904124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microglial cell migration","synonyms":[{"name":"down regulation of microglial cell migration","type":"exact"},{"name":"down-regulation of microglial cell migration","type":"exact"},{"name":"downregulation of microglial cell migration","type":"exact"},{"name":"inhibition of microglial cell migration","type":"narrow"}],"termid":"GO:1904140"}


id: GO:0018781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-halo or 1-pseudohalo-S-triazine = 1-hydroxy-S-triazine.","definition_xrefs":["UM-BBD_ruleID:bt0330"],"gene_count":0,"genotype_count":0,"name":"obsolete S-triazine hydrolase activity (obsolete GO:0018781)","termid":"GO:0018781"}


id: MONDO:0014279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arrhythmogenic right ventricular dysplasia, familial, 13 (obsolete MONDO:0014279)","termid":"MONDO:0014279","xrefs":{"Monarch":{"xref_id":"0014279"}}}


id: PBO:0084083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide dissociation stimulator for Sec4p; functions in the post-Golgi secretory pathway; binds zinc, found both on membranes and in the cytosol","termid":"PBO:0084083"}


id: PBO:0085152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleosomal histone H3-Lys79 methylase; methylation is required for telomeric silencing, meiotic checkpoint control, and DNA damage response; single DOT1 gene produces two Dot1p isoforms from alternative translation start sites as a result of leaky scanning by the ribosome","termid":"PBO:0085152"}


id: PBO:0029654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_heat_shock","termid":"PBO:0029654"}


id: PBO:0034042
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_hemiplasy_relationship_with","termid":"PBO:0034042"}


id: PBO:0072443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 7","termid":"PBO:0072443"}


id: MONDO:0015966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary eye tumor (obsolete MONDO:0015966)","secondary_identifiers":["Orphanet:183619"],"synonyms":[{"name":"genetic eye tumor","type":"related"}],"termid":"MONDO:0015966","xrefs":{"Monarch":{"xref_id":"0015966"}}}


id: MONDO:0024341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm arising from the neural retina. This category includes retinoblastoma and retinocytoma.","direct_ancestors":[{"relation_name":"is_a","term_name":"retina neoplasm","termid":"MONDO:0021231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal cell neoplasm","secondary_identifiers":["NCIT:C7061","UMLS:C1335765","MEDGEN:277595"],"synonyms":[{"name":"retinal cell neoplasm","type":"exact"},{"name":"retinal cell tumor","type":"exact"},{"name":"retinal cell tumour","type":"exact"},{"name":"retinal neural cell neoplasm","type":"exact"}],"termid":"MONDO:0024341","xrefs":{"Monarch":{"xref_id":"0024341"}}}


id: PATO:0000848
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000848 relative auditory acuity (obsolete PATO:0000848)","termid":"PATO:0000848"}


id: PBO:0000983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine synthase Cys12","termid":"PBO:0000983"}


id: GO:0030121
data:
  {"annotated_genes":["SJAG_04609","SJAG_00379","SJAG_04565","SJAG_01809"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62264,78104,113167,113378],"is_not":false,"summary":null,"term":"GO:0030121"}]},"cv_name":"cellular_component","definition":"A heterotetrameric AP-type membrane coat adaptor complex that consists of beta1, gamma, mu1 and sigma1 subunits and links clathrin to the membrane surface of a vesicle; vesicles with AP-1-containing coats are normally found primarily in the trans-Golgi network. In at least humans, the AP-1 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different genes (gamma1 and gamma2, mu1A and mu1B, and sigma1A, sigma1B and sigma1C).","definition_xrefs":["PMID:10611976","PMID:21097499","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin adaptor complex","termid":"GO:0030131"},{"relation_name":"part_of","term_name":"clathrin coat of trans-Golgi network vesicle","termid":"GO:0030130"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_01809":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005794","GO:0005737","GO:0031410","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"AP-1 adaptor complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"AP-1 related adapter complex","type":"related"},{"name":"HA1","type":"exact"},{"name":"HA1 clathrin adaptor","type":"exact"}],"termid":"GO:0030121","terms_by_termid":{"GO:0030121":null}}


id: PBO:0052068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT7 pseudogene 1","termid":"PBO:0052068"}


id: GO:0120078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules that contributes to the formation of a blood vessel network.","definition_xrefs":["GOC:cvs","PMID:28264837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion","termid":"GO:0007155"},{"relation_name":"part_of","term_name":"angiogenic sprout fusion","termid":"GO:0120077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in sprouting angiogenesis","synonyms":[{"name":"cell adhesion involved in blood vessel anastomosis","type":"exact"},{"name":"cell adhesion involved in vascular anastomosis","type":"related"}],"termid":"GO:0120078"}


id: PBO:0082963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function; non-essential gene that is induced in a GDH1 deleted strain with altered redox metabolism; GFP-fusion protein is induced in response to the DNA-damaging agent MMS","termid":"PBO:0082963"}


id: MONDO:0001837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of gonococcal salpingitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute salpingitis","termid":"MONDO:0001173"},{"relation_name":"is_a","term_name":"gonococcal salpingitis","termid":"MONDO:0021159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute gonococcal salpingitis","secondary_identifiers":["UMLS:C0275654","DOID:13942","icd11.foundation:48273613","ICD9:098.17","MEDGEN:546728","SCTID:45377007"],"synonyms":[{"name":"gonococcal salpingitis, acute","type":"exact"},{"name":"gonococcal salpingitis, specified as acute","type":"exact"}],"termid":"MONDO:0001837","xrefs":{"Monarch":{"xref_id":"0001837"}}}


id: MONDO:0019196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Foix-Alajouanine syndrome, also called subacute ascending necrotising myelitis, results from chronic congestion of the extrinsic pial veins of the spinal cord and of the intrinsic subpial network. It is characterized by progressive ascending deficit over a period of several months or years.","definition_xrefs":["Orphanet:79093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteriovenous hemangioma/malformation","termid":"MONDO:0001256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Foix-Alajouanine syndrome","secondary_identifiers":["MEDGEN:141629","SCTID:230379007","ICD9:323.9","UMLS:C0472347","GARD:4163","icd11.foundation:937824238"],"synonyms":[{"name":"Subacute angiohypertrophic myelomalacia","type":"exact"},{"name":"Subacute ascending necrotizing myelitis","type":"exact"},{"name":"Subacute necrotizing myelitis","type":"exact"},{"name":"angiodysgenetic necrotizing myelopathy","type":"exact"},{"name":"familial osteosclerosis with abnormalities of the nervous system and meninges","type":"exact"}],"termid":"MONDO:0019196","xrefs":{"Monarch":{"xref_id":"0019196"}}}


id: PBO:0054482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1882","termid":"PBO:0054482"}


id: GO:0030216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a keratinocyte.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mah","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal cell differentiation","termid":"GO:0009913"},{"relation_name":"part_of","term_name":"skin development","termid":"GO:0043588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"keratinocyte differentiation","synonyms":[{"name":"keratinocyte cell differentiation","type":"exact"}],"termid":"GO:0030216"}


id: PBO:0064393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomevalonate kinase","termid":"PBO:0064393"}


id: MONDO:0012820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any colorectal cancer in which the cause of the disease is a mutation in the SMAD7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 3","secondary_identifiers":["OMIM:612229","UMLS:C2677123","MEDGEN:436866"],"synonyms":[{"name":"CRCS3","type":"related"},{"name":"SMAD7 colorectal cancer","type":"exact"},{"name":"colorectal cancer caused by mutation in SMAD7","type":"exact"},{"name":"colorectal cancer, susceptibility to, 3","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 18","type":"related"},{"name":"colorectal cancer, susceptibility to, type 3","type":"exact"},{"name":"susceptibility to colorectal cancer 3","type":"related"}],"termid":"MONDO:0012820","xrefs":{"Monarch":{"xref_id":"0012820"}}}


id: MONDO:0859527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 88","secondary_identifiers":["UMLS:C5830355","MEDGEN:1840991","OMIM:620283"],"termid":"MONDO:0859527","xrefs":{"Monarch":{"xref_id":"0859527"}}}


id: PBO:0051893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 2b","termid":"PBO:0051893"}


id: PBO:0028753
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_alpha-glucan_level_during_cellular_response_to_calcium_starvation","termid":"PBO:0028753"}


id: PBO:0031036
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_lipid_particle_organization","termid":"PBO:0031036"}


id: GO:0043161
data:
  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id: PBO:0087812
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tetrameric histone acetyltransferase; has similarity to Gcn5p, Hat1p, Elp3p, and Hpa3p; acetylates histones H3 and H4 in vitro and exhibits autoacetylation activity; also acetylates polyamines","termid":"PBO:0087812"}


id: PBO:0066961
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 263","termid":"PBO:0066961"}


id: PBO:0047539
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 5","termid":"PBO:0047539"}


id: GO:0001786
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  {"annotated_genes":["SJAG_03170","SJAG_04077","SJAG_02572","SJAG_00053"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88314,90741,102767,104727],"is_not":false,"summary":null,"term":"GO:0001786"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylserine, a class of glycophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of L-serine.","definition_xrefs":["ISBN:0198506732","PMID:12000961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"},{"relation_name":"is_a","term_name":"modified amino acid binding","termid":"GO:0072341"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_02572":null,"SJAG_03170":null,"SJAG_04077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"phosphatidylserine binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0001786","terms_by_termid":{"GO:0001786":null}}


id: MONDO:0005137
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  {"annotated_genes":["SJAG_03069","SJAG_04980","SJAG_04459","SJAG_04425","SJAG_01199","SJAG_00857","SJAG_04042","SJAG_04398","SJAG_01881","SJAG_05230"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014352"},{"annotations":[87351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015005"},{"annotations":[86611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[85883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0006065"},{"annotations":[85583,85582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[86191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[87011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[85541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[85832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012407"}]},"cv_name":"mondo","definition":"Any condition related to a disturbance between proper intake and utilization of nourishment.","definition_xrefs":["NCIT:C26836"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"excluded_subClassOf","term_name":"acquired metabolic disease","termid":"MONDO:0006504"},{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_01199":null,"SJAG_01881":null,"SJAG_03069":null,"SJAG_04042":null,"SJAG_04398":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_04980":null,"SJAG_05230":null},"genotype_count":0,"is_obsolete":false,"name":"nutritional disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:374","EFO:0001069","ICD9:783.9","MESH:D009748","UMLS:C3714509","MEDGEN:811347","SCTID:2492009"],"synonyms":[{"name":"nutrition disease","type":"related"},{"name":"nutritional disorder","type":"exact"}],"termid":"MONDO:0005137","terms_by_termid":{"MONDO:0006065":null,"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0009666":null,"MONDO:0010184":null,"MONDO:0010961":null,"MONDO:0012407":null,"MONDO:0014352":null,"MONDO:0015005":null},"xrefs":{"Monarch":{"xref_id":"0005137"}}}


id: GO:0180043
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of an inositol pyrophosphate.","definition_xrefs":["PMID:37949217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140299","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"inositol pyrophosphate sensor activity","termid":"GO:0180043"}


id: PBO:0034759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex subunit Ngg1/Ada3","termid":"PBO:0034759"}


id: PR:O74960
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pil1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingolipid long chain base-responsive protein pil1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.15","synonyms":[{"name":"Spom972h-pil1","type":"exact"},{"name":"protein kinase inhibitor pil1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74960"}


id: FYPO:0006841
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through S phase of the meiotic cell cycle (preceding meiosis I) is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of meiotic cell cycle phase","termid":"FYPO:0002220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of meiotic S phase","synonyms":[{"name":"delayed meiotic S phase progression","type":"related"},{"name":"increased duration of meiotic S phase progression","type":"exact"},{"name":"increased duration of premeiotic DNA replication","type":"related"},{"name":"prolonged meiotic S phase","type":"exact"},{"name":"prolonged premeiotic DNA replication","type":"related"}],"termid":"FYPO:0006841"}


id: PR:O94667
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prf1 gene.","definition_xrefs":["UniProtKB:O94667","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase-associated protein C651.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.09c","synonyms":[{"name":"Spom972h-prf1","type":"exact"},{"name":"protein RTF1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94667"}


id: PBO:0117373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial oxaloacetate tautomerase involved in metabolite repair Oaa1","termid":"PBO:0117373"}


id: PBO:0069413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 674, pseudogene","termid":"PBO:0069413"}


id: MONDO:1011199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary chondrodysplasia in cattle associated with a variation in the FGFR3 gene.","definition_xrefs":["PMID:32239744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia FGFR3-related, cattle","secondary_identifiers":["OMIA:001703-9913"],"termid":"MONDO:1011199","xrefs":{"Monarch":{"xref_id":"1011199"}}}


id: MONDO:0019038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare maxillo-facial surgical disease (obsolete MONDO:0019038)","secondary_identifiers":["Orphanet:68329"],"synonyms":[{"name":"rare maxillofacial anomaly","type":"exact"}],"termid":"MONDO:0019038","xrefs":{"Monarch":{"xref_id":"0019038"}}}


id: FYPO:0004785
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to menadione is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during cellular response to menadione","synonyms":[{"name":"increased RNA accumulation during cellular response to menadione","type":"related"},{"name":"increased RNA level during cellular response to menadione during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to menadione during vegetative growth","type":"exact"},{"name":"increased mRNA level during cellular response to menadione","type":"narrow"},{"name":"increased transcript level during cellular response to menadione","type":"exact"}],"termid":"FYPO:0004785"}


id: PBO:0017815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc14 (predicted)","termid":"PBO:0017815"}


id: GO:1900940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of (Z)-nonadeca-1,14-diene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900938"},{"relation_name":"positively_regulates","term_name":"(Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of (Z)-nonadeca-1,14-diene metabolic process","synonyms":[{"name":"activation of (Z)-nonadeca-1,14-diene metabolic process","type":"narrow"},{"name":"activation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"positive regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"up regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"up-regulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene metabolic process","type":"exact"},{"name":"upregulation of (Z)-nonadeca-1,14-diene metabolism","type":"exact"}],"termid":"GO:1900940"}


id: PBO:0075972
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STARD13 antisense RNA","termid":"PBO:0075972"}


id: SO:0000910
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  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene whose predicted amino acid sequence is unsupported by any experimental evidence or by any match with any other known sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"predicted","termid":"SO:0000732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orphan","termid":"SO:0000910"}


id: GO:0075267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cup-like structure containing chains of aeciospores is formed. This is characteristic of the rust fungus and typically, the first dikaryotic spores (aeciospores) are produced in the aecium.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aecium development","termid":"GO:0075267"}


id: MONDO:0020201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete conjunctival telangiectasia (obsolete MONDO:0020201)","secondary_identifiers":["MedDRA:10072143","HP:0000524","Orphanet:98613"],"synonyms":[{"name":"conjunctival telangiectasia","type":"exact"},{"name":"obsolete conjunctival telangiectasia (disease)","type":"exact"}],"termid":"MONDO:0020201","xrefs":{"Monarch":{"xref_id":"0020201"}}}


id: MONDO:0007767
data:
  {"annotated_genes":["SJAG_01151"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86000],"is_not":false,"summary":null,"term":"MONDO:0007767"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated hyperparathyroidism","termid":"MONDO:0015027"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01151":null},"genotype_count":0,"is_obsolete":false,"name":"hyperparathyroidism 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:145000","UMLS:C1840402","GARD:18253","MEDGEN:333554"],"synonyms":[{"name":"HRPT1","type":"related"},{"name":"hyperparathyroidism 1","type":"exact"},{"name":"hyperparathyroidism type 1","type":"exact"},{"name":"hyperparathyroidism, familial isolated primary","type":"related"},{"name":"hyperparathyroidism, familial primary","type":"exact"},{"name":"parathyroid adenoma, familial","type":"related"}],"termid":"MONDO:0007767","terms_by_termid":{"MONDO:0007767":null},"xrefs":{"Monarch":{"xref_id":"0007767"}}}


id: MOD:00485
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:113#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized lysine biotinylated with biotin-LC-hydrazide","synonyms":[{"name":"OxLysBiotin","type":"related"},{"name":"Oxidized lysine biotinylated with biotin-LC-hydrazide","type":"related"}],"termid":"MOD:00485"}


id: GO:0033111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an attachment organelle. This is a region of the cell membrane facing the environment - in mycoplasma, part of the mycolate outer membrane.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"attachment organelle","termid":"GO:0033099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"attachment organelle membrane","termid":"GO:0033111"}


id: GO:0075051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of symbiont cell wall strengthening during entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of symbiont cell wall strengthening involved in entry into host (obsolete GO:0075051)","synonyms":[{"name":"negative regulation of symbiont cell wall strengthening during entry into host","type":"related"}],"termid":"GO:0075051"}


id: GO:0006972
data:
  {"annotated_genes":["SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071474"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hyperosmotic environment, i.e. an environment with a higher concentration of solutes than the organism or cell.","definition_xrefs":["PMID:12142009","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyperosmotic response","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HOG response","type":"exact"},{"name":"hypertonic response","type":"exact"},{"name":"response to hypertonicity","type":"exact"}],"termid":"GO:0006972","terms_by_termid":{"GO:0071474":null}}


id: RO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p 'results in determination of' c if and only if p is a developmental process and c is a cell and p results in the state of c changing to be determined. Once a cell becomes determined, it becomes committed to differentiate down a particular pathway regardless of its environment.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_determination_of","termid":"RO:0002349"}


id: MONDO:0859219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rauch-Steindl syndrome","secondary_identifiers":["Orphanet:659642","UMLS:C5562061","OMIM:619695","MEDGEN:1794271"],"termid":"MONDO:0859219","xrefs":{"Monarch":{"xref_id":"0859219"}}}


id: PBO:0091149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatC N-acetyltransferase non-catalytic Sm-like domain subunit Naa38","termid":"PBO:0091149"}


id: PBO:0076277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex protein 1","termid":"PBO:0076277"}


id: GO:0035239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a tube are generated and organized. Epithelial and endothelial tubes transport gases, liquids and cells from one site to another and form the basic structure of many organs and tissues, with tube shape and organization varying from the single-celled excretory organ in Caenorhabditis elegans to the branching trees of the mammalian kidney and insect tracheal system.","definition_xrefs":["GOC:bf","PMID:14624839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"tube development","termid":"GO:0035295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tube morphogenesis","termid":"GO:0035239"}


id: GO:0010931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involving any mechanism for tolerance induction in macrophages.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage tolerance induction","termid":"GO:0010931"}


id: GO:0007597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that contributes to blood coagulation and consists of the interactions among high molecular weight kininogen, prekallikrein, and factor XII that lead to the activation of clotting factor X.","definition_xrefs":["GOC:mah","GOC:pde","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"},{"relation_name":"part_of","term_name":"blood coagulation, fibrin clot formation","termid":"GO:0072378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"blood coagulation, intrinsic pathway","secondary_identifiers":["Reactome:R-HSA-140837"],"termid":"GO:0007597"}


id: PBO:0072560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding D","termid":"PBO:0072560"}


id: GO:0002920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a humoral immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"humoral immune response","termid":"GO:0006959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of humoral immune response","termid":"GO:0002920"}


id: GO:0061799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate = cyclic pyranopterin phosphate + diphosphate.","definition_xrefs":["PMID:25896388","GOC:dph","GOC:ik"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"cyclic pyranopterin monophosphate synthase activity","secondary_identifiers":["EC:4.6.1.17","MetaCyc:RXN-17809","RHEA:49580"],"termid":"GO:0061799"}


id: GO:0048037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete cofactor binding (obsolete GO:0048037)","termid":"GO:0048037"}


id: PBO:0032702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9K14_acetylation","termid":"PBO:0032702"}


id: GO:0050743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via 1'-(8alpha-FMN)-L-histidine.","definition_xrefs":["PMID:8611516","RESID:AA0352"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via 1'-(8alpha-FMN)-L-histidine (obsolete GO:0050743)","termid":"GO:0050743"}


id: GO:0061889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of astrocyte activation.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:20005821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of astrocyte differentiation","termid":"GO:0048712"},{"relation_name":"is_a","term_name":"negative regulation of cell activation","termid":"GO:0050866"},{"relation_name":"is_a","term_name":"regulation of astrocyte activation","termid":"GO:0061888"},{"relation_name":"is_a","term_name":"negative regulation of neuroinflammatory response","termid":"GO:0150079"},{"relation_name":"negatively_regulates","term_name":"astrocyte activation","termid":"GO:0048143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of astrocyte activation","termid":"GO:0061889"}


id: MONDO:0850282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asthma that is characterized by the development of persistent airway inflammation and recurrent attacks of breathlessness and wheezing, which vary in severity and frequency.","definition_xrefs":["DOID:0080809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic asthma","secondary_identifiers":["MEDGEN:1843404","UMLS:C0877430"],"synonyms":[{"name":"adult-onset severe asthma","type":"narrow"},{"name":"persistent mild asthma","type":"narrow"},{"name":"persistent moderate asthma","type":"narrow"},{"name":"persistent severe asthma","type":"narrow"}],"termid":"MONDO:0850282","xrefs":{"Monarch":{"xref_id":"0850282"}}}


id: MOD:00206
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-isoglutamyl-polyglycine.","definition_xrefs":["PubMed:16368691","PubMed:10074368","PubMed:7992051","RESID:AA0201","ChEBI:21343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-isoglutamyl-polyglycine","synonyms":[{"name":"L-isoglutamyl-polyglycine","type":"exact"},{"name":"MOD_RES 5-glutamyl polyglycine","type":"exact"},{"name":"gamma-glutamylpolyglycine","type":"exact"}],"termid":"MOD:00206"}


id: MONDO:0016006
data:
  {"annotated_genes":["SJAG_04540","SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019569"},{"annotations":[86405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019570"}]},"cv_name":"mondo","definition":"A multisystem condition characterized by short stature, a characteristic facial appearance, premature aging, photosensitivity, progressive neurological dysfunction, and intellectual deficit.","definition_xrefs":["Orphanet:191"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"excluded_subClassOf","term_name":"hereditary photodermatosis","termid":"MONDO:0015951"},{"relation_name":"excluded_subClassOf","term_name":"premature aging syndrome","termid":"MONDO:0019303"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic hearing loss (obsolete MONDO:0019589)","termid":"MONDO:0019589"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic retinitis pigmentosa (obsolete MONDO:0020240)","termid":"MONDO:0020240"},{"relation_name":"excluded_subClassOf","term_name":"DNA repair disease","termid":"MONDO:0021190"},{"relation_name":"excluded_subClassOf","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04114":null,"SJAG_04540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0019303","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"Cockayne syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1206275070","MEDGEN:40363","DOID:2962","MESH:D003057","MedDRA:10009835","NANDO:2200832","NORD:982","NCIT:C9460","SCTID:21086008","UMLS:C0009207","GARD:6122","NANDO:1200677","ICD9:759.89"],"synonyms":[{"name":"Cockayne's syndrome","type":"related"},{"name":"Neill-Dingwall syndrome","type":"exact"},{"name":"dwarfism-retinal atrophy-deafness syndrome","type":"related"},{"name":"progeria-like syndrome","type":"related"},{"name":"progeroid nanism","type":"related"}],"termid":"MONDO:0016006","terms_by_termid":{"MONDO:0019569":null,"MONDO:0019570":null},"xrefs":{"Monarch":{"xref_id":"0016006"}}}


id: PR:Q9P802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein mis18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.12","synonyms":[{"name":"Spom972h-mis18","type":"exact"}],"termid":"PR:Q9P802"}


id: PBO:0072937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 17","termid":"PBO:0072937"}


id: GO:0001169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to CORE element, a regulatory region composed of the transcription start site and binding sites for transcription factors of the RNA polymerase I transcription machinery in order to modulate transcription by RNA polymerase I.","definition_xrefs":["PMID:14969726","PMID:8057832","GOC:txnOH","PMID:12865296"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, RNA polymerase I CORE element sequence-specific binding (obsolete GO:0001169)","synonyms":[{"name":"RNA polymerase I CORE element sequence-specific DNA binding transcription factor activity","type":"exact"},{"name":"RNA polymerase I core promoter sequence-specific DNA binding transcription factor","type":"exact"}],"termid":"GO:0001169"}


id: GO:0070066
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains cellubrevin (VAMP3), VAMP4, endobrevin (VAMP8), and syntaxin 6 (or orthologs thereof).","definition_xrefs":["PMID:11839770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cellubrevin-VAMP4-endobrevin-syntaxin-6 complex","synonyms":[{"name":"SNARE complex (Vamp3, Vamp4, Vam8, Stx6)","type":"narrow"},{"name":"Vamp3-Vamp4-Vam8-Stx6 complex","type":"narrow"}],"termid":"GO:0070066"}


id: PBO:0058615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6747","termid":"PBO:0058615"}


id: GO:0062161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a pyocyanine biosynthetic process.","definition_xrefs":["PMID:28715477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"pyocyanine biosynthetic process","termid":"GO:0106220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pyocyanine biosynthetic process","synonyms":[{"name":"regulation of pyocyanin biosynthetic process","type":"exact"}],"termid":"GO:0062161"}


id: GO:0097657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',5'-nucleoside bisphosphate + H20 = 5'-nucleoside monophosphate + phosphate.","definition_xrefs":["PMID:24401123","RHEA:43532","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3',5'-nucleotide bisphosphate phosphatase activity","secondary_identifiers":["EC:3.1.3.97"],"termid":"GO:0097657"}


id: MONDO:0017402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"familial isolated arrhythmogenic ventricular dysplasia, biventricular form","secondary_identifiers":["UMLS:C5925016","MEDGEN:1864265","DOID:0070535","Orphanet:293899","GARD:17346"],"synonyms":[{"name":"familial isolated arrhythmogenic ventricular cardiomyopathy, biventricular form","type":"exact"}],"termid":"MONDO:0017402","xrefs":{"Monarch":{"xref_id":"0017402"}}}


id: GO:0048796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a swim bladder to attain its fully functional state. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ maturation","termid":"GO:0048799"},{"relation_name":"part_of","term_name":"swim bladder development","termid":"GO:0048794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder maturation","synonyms":[{"name":"gas bladder maturation","type":"exact"}],"termid":"GO:0048796"}


id: SO:0001527
data:
  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id: PBO:0088723
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id: FYPO:0001437
data:
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id: GO:1900135
data:
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id: GO:0009130
data:
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id: PBO:0073195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selectin L","termid":"PBO:0073195"}


id: PBO:0049745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit mu","termid":"PBO:0049745"}


id: PBO:0056228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member H1","termid":"PBO:0056228"}


id: FYPO:0003697
data:
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id: MONDO:0004853
data:
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id: PBO:0085277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal matrix-localized lipase; required for normal peroxisome morphology; contains a peroxisomal targeting signal type 1 (PTS1) and a lipase motif; peroxisomal import requires the PTS1 receptor, Pex5p and self-interaction; transcriptionally activated by Yrm1p along with genes involved in multidrug resistance; oleic acid inducible","termid":"PBO:0085277"}


id: GO:0120543
data:
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of a reaction that alters the macromolecular conformation of a molecule.","definition_xrefs":["EC:5.6.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase 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conformation isomerase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0120543","terms_by_termid":{"GO:0000146":null,"GO:0003678":null,"GO:0003724":null,"GO:0003777":null,"GO:0003917":null,"GO:0003918":null,"GO:0004386":null,"GO:0008568":null,"GO:0008569":null,"GO:0008574":null,"GO:0009378":null,"GO:0017116":null,"GO:0032574":null,"GO:0033592":null,"GO:0033678":null,"GO:0033679":null,"GO:0034458":null,"GO:0036121":null,"GO:0036402":null,"GO:0043138":null,"GO:0043139":null,"GO:0061749":null,"GO:1990518":null,"GO:1990814":null}}


id: GO:0098541
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the trans-Golgi network transport vesicle membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of transport vesicle membrane","termid":"GO:0098539"},{"relation_name":"part_of","term_name":"trans-Golgi network transport vesicle membrane","termid":"GO:0012510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of trans-Golgi network transport vesicle membrane","synonyms":[{"name":"external side of trans-Golgi network transport vesicle membrane","type":"exact"}],"termid":"GO:0098541"}


id: MONDO:0013681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder caused by mutation in the AMACR gene. Racemization is the prerequisite to beta-oxidation for branched chain fatty acids and bile acids. It is characterized by neurological abnormalities that appear in adulthood and include cognitive decline, seizures, and sensorimotor neuropathy. AMACR deficiency rarely presents as liver disease in infancy.","definition_xrefs":["NCIT:C119677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of peroxisomal beta oxidation","termid":"MONDO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"alpha-methylacyl-CoA racemase deficiency","secondary_identifiers":["SCTID:700463002","DOID:0060602","GARD:15787","MEDGEN:482058","UMLS:C3280428","EFO:1001980","NANDO:1200768","OMIM:614307","MESH:C565768"],"synonyms":[{"name":"AMACR","type":"exact"},{"name":"AMACR deficiency","type":"exact"},{"name":"AMACRD","type":"related"},{"name":"alpha-methylacyl-CoA racemase deficiency","type":"exact"}],"termid":"MONDO:0013681","xrefs":{"Monarch":{"xref_id":"0013681"}}}


id: PBO:0027127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_middle_meiotic_gene_mRNA_during_vegetative_growth","termid":"PBO:0027127"}


id: PBO:0050943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 14","termid":"PBO:0050943"}


id: GO:0106280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the UDP-N-acetylglucosamine biosynthetic process.","definition_xrefs":["PMID:32579556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0106278"},{"relation_name":"positively_regulates","term_name":"UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0006048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of UDP-N-acetylglucosamine biosynthetic process","synonyms":[{"name":"positive egulation of UDP-N-acetylglucosamine formation","type":"related"},{"name":"positive regulation of UDP-GlcNAc biosynthetic process","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine anabolism","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine biosynthesis","type":"related"},{"name":"positive regulation of UDP-N-acetylglucosamine synthesis","type":"related"}],"termid":"GO:0106280"}


id: PBO:0071056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 58","termid":"PBO:0071056"}


id: MONDO:0037744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of jaw","termid":"MONDO:0021580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of retromolar area","secondary_identifiers":["MEDGEN:577022","SCTID:126804008","UMLS:C0345590"],"synonyms":[{"name":"neoplasm of retromolar area","type":"exact"},{"name":"tumor of retromolar area","type":"related"},{"name":"tumour of retromolar area","type":"related"}],"termid":"MONDO:0037744","xrefs":{"Monarch":{"xref_id":"0037744"}}}


id: GO:0010634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelial cell migration.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell migration","termid":"GO:0010632"},{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"positively_regulates","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell migration","termid":"GO:0010634"}


id: PBO:0042041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 92B","termid":"PBO:0042041"}


id: PBO:0087720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; conserved from yeast to human; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; required for transcriptional activation and has a role in basal transcription; protein abundance increases in response to DNA replication stress","termid":"PBO:0087720"}


id: PBO:0051195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-13 (non-functional)","termid":"PBO:0051195"}


id: FYPO:0004515
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which DNA is not visible in a distinct structure corresponding to the nucleus, but is instead diffuse or not visible at all.","definition_xrefs":["PomBase:mah","PMID:25552606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000707","FYPO:0000002","FYPO:0000661","FYPO:0000641","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal chromosome morphology, indistinct DNA","synonyms":[{"name":"abnormal chromosome morphology, indistinct DNA during mitotic cell cycle","type":"related"},{"name":"abnormal chromosome morphology, indistinct DNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004515"}


id: PBO:0030373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_thiamine_starvation","termid":"PBO:0030373"}


id: GO:0015599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + glutamine(out) -> ADP + phosphate + glutamine(in).","definition_xrefs":["RHEA:29895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamine transmembrane transporter activity","termid":"GO:0015186"},{"relation_name":"is_a","term_name":"ATPase-coupled polar amino acid-transporter activity","termid":"GO:0015426"},{"relation_name":"is_a","term_name":"ATPase-coupled carboxylic acid transmembrane transporter activity","termid":"GO:0033284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled L-glutamine transmembrane transporter activity","secondary_identifiers":["MetaCyc:ABC-12-RXN"],"synonyms":[{"name":"ATPase-coupled glutamine transmembrane transporter activity","type":"broad"},{"name":"glutamine porter activity","type":"broad"},{"name":"glutamine-importing ATPase activity","type":"related"}],"termid":"GO:0015599"}


id: MONDO:0017693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glycogen storage disease due to glycogen synthase deficiency (obsolete MONDO:0017693)","secondary_identifiers":["Orphanet:308520","NANDO:1200824"],"synonyms":[{"name":"GSD due to glycogen synthase deficiency","type":"exact"},{"name":"GSD0","type":"exact"},{"name":"glycogen storage disease type 0","type":"exact"},{"name":"glycogenosis due to glycogen synthase deficiency","type":"exact"}],"termid":"MONDO:0017693","xrefs":{"Monarch":{"xref_id":"0017693"}}}


id: FYPO:0007830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein located in the medial cortical nodes occupies an area with a smaller radius than normal during interphase of the mitotic cell cycle. The nodes are \\\"precursor\\\" nodes that exist before the contractile ring is formed.","definition_xrefs":["PMID:33496728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortical node","termid":"FYPO:0003289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"narrow protein radial density distribution in medial cortical node during mitotic interphase","synonyms":[{"name":"decreased protein RDD in medial cortical node during mitotic interphase","type":"exact"},{"name":"decreased protein radial density distribution in medial cortical node during mitotic interphase","type":"exact"},{"name":"narrow protein RDD in medial cortical node during mitotic interphase","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical P-node","type":"related"},{"name":"narrow protein radial density distribution in medial cortical node during interphase of mitotic cell cycle","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical node during mitotic interphase during vegetative growth","type":"exact"},{"name":"narrow protein radial density distribution in medial cortical precursor node","type":"related"},{"name":"narrow radial density distribution of protein in medial cortical node during mitotic interphase","type":"exact"},{"name":"reduced protein radial density distribution in medial cortical node during mitotic interphase","type":"exact"}],"termid":"FYPO:0007830"}


id: GO:1904055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cholangiocyte proliferation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24434010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of cholangiocyte proliferation","termid":"GO:1904054"},{"relation_name":"negatively_regulates","term_name":"cholangiocyte proliferation","termid":"GO:1990705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholangiocyte proliferation","synonyms":[{"name":"down regulation of cholangiocyte proliferation","type":"exact"},{"name":"down regulation of hepatoblast proliferation","type":"exact"},{"name":"down-regulation of cholangiocyte proliferation","type":"exact"},{"name":"down-regulation of hepatoblast proliferation","type":"exact"},{"name":"downregulation of cholangiocyte proliferation","type":"exact"},{"name":"downregulation of hepatoblast proliferation","type":"exact"},{"name":"inhibition of cholangiocyte proliferation","type":"narrow"},{"name":"inhibition of hepatoblast proliferation","type":"narrow"},{"name":"negative regulation of hepatoblast proliferation","type":"exact"}],"termid":"GO:1904055"}


id: GO:1901919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exoribonuclease activity.","definition_xrefs":["PMID:22570495","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nuclease activity","termid":"GO:0032075"},{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of ribonuclease activity","termid":"GO:0060700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of exoribonuclease activity","synonyms":[{"name":"activation of exoribonuclease activity","type":"narrow"},{"name":"up regulation of exoribonuclease activity","type":"exact"},{"name":"up-regulation of exoribonuclease activity","type":"exact"},{"name":"upregulation of exoribonuclease activity","type":"exact"}],"termid":"GO:1901919"}


id: PBO:0052099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A member 2","termid":"PBO:0052099"}


id: PBO:0074787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 8","termid":"PBO:0074787"}


id: PBO:0002336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial citrate transporter (predicted)","termid":"PBO:0002336"}


id: PBO:0069635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 912, pseudogene","termid":"PBO:0069635"}


id: MONDO:0858966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system embryonal tumor that is characterized by the presence of uniform oval or spindle-shaped cells with round or oval nuclei, pseudorosette formation, and heterozygous internal tandem duplication in exon 15 of the BCOR gene.","definition_xrefs":["DOID:0081315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system primitive neuroectodermal neoplasm","termid":"MONDO:0000640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"central nervous system tumor with bcor internal tandem duplication","secondary_identifiers":["MEDGEN:1811171","NCIT:C186556","UMLS:C5670630"],"termid":"MONDO:0858966","xrefs":{"Monarch":{"xref_id":"0858966"}}}


id: MONDO:0016167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Optic pathway glioma (OPG) is a benign tumor that develop along the optic nerve (chiasm, tracts, and radiations) characterized by impairment or loss of vision and may be accompanied by diencephalic symptoms such as reduced growth and alteration in sleeping patterns. OPG are often linked to neurofibromatosis type 1 (NF1).","definition_xrefs":["Orphanet:2086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual pathway disorder","termid":"MONDO:0001834"},{"relation_name":"is_a","term_name":"tumor of cranial and spinal nerves","termid":"MONDO:0016749"},{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optic pathway glioma","secondary_identifiers":["UMLS:C0796418","MEDGEN:162950","NCIT:C8567","icd11.foundation:1000103370","GARD:4107"],"synonyms":[{"name":"glioma of optic tract","type":"exact"},{"name":"glioma of the optic tract","type":"exact"},{"name":"glioma of the visual pathway","type":"exact"},{"name":"glioma of visual pathway","type":"exact"},{"name":"optic pathway glioma","type":"exact"},{"name":"optic tract glioma","type":"exact"},{"name":"visual pathway glioma","type":"exact"}],"termid":"MONDO:0016167","xrefs":{"Monarch":{"xref_id":"0016167"}}}


id: PBO:0031394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_arginine","termid":"PBO:0031394"}


id: GO:0010167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrate stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitrate","termid":"GO:0010167"}


id: PBO:0084352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Late endosomal protein involved in late endosome to vacuole transport; functional homolog of human obesity receptor gene-related protein (OB-RGRP)","termid":"PBO:0084352"}


id: GO:0008011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the chitin-based cuticle of a pupa. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of chitin-based cuticle","termid":"GO:0005214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of pupal chitin-based cuticle","synonyms":[{"name":"structural constituent of pupal cuticle","type":"broad"}],"termid":"GO:0008011"}


id: PBO:0043225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride channel accessory 4","termid":"PBO:0043225"}


id: PBO:0089811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex histone chaperone module subunit Swc3","termid":"PBO:0089811"}


id: PBO:0061160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin S","termid":"PBO:0061160"}


id: GO:1900339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from formic acid.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from formic acid","termid":"GO:2001127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006091","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from formic acid","termid":"GO:1900339"}


id: PBO:0044910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA fragmentation factor subunit beta","termid":"PBO:0044910"}


id: GO:0032699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-16 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-16 production","termid":"GO:0032659"},{"relation_name":"negatively_regulates","term_name":"interleukin-16 production","termid":"GO:0032619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-16 production","secondary_identifiers":["GO:0045376"],"synonyms":[{"name":"down regulation of interleukin-16 production","type":"exact"},{"name":"down-regulation of interleukin-16 production","type":"exact"},{"name":"downregulation of interleukin-16 production","type":"exact"},{"name":"inhibition of interleukin-16 production","type":"narrow"},{"name":"negative regulation of IL-16 production","type":"exact"},{"name":"negative regulation of interleukin-16 biosynthetic process","type":"narrow"}],"termid":"GO:0032699"}


id: GO:1901355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rapamycin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to rapamycin","termid":"GO:1901355"}


id: PBO:0044678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible 1 homolog 2","termid":"PBO:0044678"}


id: MONDO:0003093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma of the esophagus which contains squamous cells, mucus secreting cells, and cells of an intermediate type. (WHO)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"},{"relation_name":"is_a","term_name":"esophageal adenocarcinoma","termid":"MONDO:0005028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"mucoepidermoid esophageal carcinoma","secondary_identifiers":["MEDGEN:234232","NCIT:C5343","UMLS:C1333461","DOID:4686"],"synonyms":[{"name":"esophagus mucoepidermoid carcinoma","type":"exact"},{"name":"mucoepidermoid carcinoma of the esophagus","type":"exact"},{"name":"mucoepidermoid carcinoma of the oesophagus","type":"exact"},{"name":"oesophagus mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0003093","xrefs":{"Monarch":{"xref_id":"0003093"}}}


id: PBO:0052910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 13-2","termid":"PBO:0052910"}


id: GO:0042003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Promotion of male sex and sexual phenotypes in the hermaphroditic nematode soma. An example of this is found in Caenorhabditis elegans.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hermaphrodite somatic sex determination","termid":"GO:0042001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"masculinization of hermaphrodite soma","termid":"GO:0042003"}


id: FYPO:0008019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing arginine as the nitrogen source.","definition_xrefs":["PMID:7903653","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0000139","FYPO:0000257","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on arginine nitrogen source","synonyms":[{"name":"normal cell population growth on arginine nitrogen source","type":"exact"}],"termid":"FYPO:0008019"}


id: PBO:0055824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRAT domain containing 2","termid":"PBO:0055824"}


id: FYPO:0005029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of the gamma-tubulin complex to the spindle pole body is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body","termid":"FYPO:0004589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased gamma-tubulin complex localization to mitotic spindle pole body","synonyms":[{"name":"decreased gamma-tubulin complex localisation to mitotic spindle pole body","type":"exact"},{"name":"decreased gamma-tubulin complex localization to mitotic SPB","type":"exact"},{"name":"decreased gamma-tubulin complex localization to mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased gamma-tubulin complex localization to mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"reduced gamma-tubulin complex localization to mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0005029"}


id: SO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of nucleotide sequence that has translocated to a new position. The observed adjacency of two previously separated regions.","definition_xrefs":["NCBI:th","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural_alteration","termid":"SO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation","synonyms":[{"name":"transchr","type":"related"},{"name":"translocated sequence","type":"exact"}],"termid":"SO:0000199"}


id: GO:0043185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vascular endothelial growth factor receptor 3.","definition_xrefs":["GOC:st"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial growth factor receptor binding","termid":"GO:0005172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"vascular endothelial growth factor receptor 3 binding","synonyms":[{"name":"VEGF receptor 3 binding","type":"exact"},{"name":"VEGFR 3 binding","type":"exact"},{"name":"fms-like-tyrosine kinase (Flt)-4 binding","type":"exact"}],"termid":"GO:0043185"}


id: PBO:0001657
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa","termid":"PBO:0001657"}


id: GO:0106003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex involved in modulation of signaling and synaptic function in the brain, predominantly in the cerebral cortex and hippocampus. Forms dimers and multimers of amyloid beta peptide 40 and peptide 42 (proteolytic cleavage products of amyloid beta A4 protein, also known as amyloid beta precursor protein). Mostly found in the extracellular space with a proportion occurring as membrane-bound species. Influences synaptic plasticity through various receptors, mediates dendritic spine loss leading to decreased synapse density, inhibits long-term potentiation (LTP) and enhances long-term depression (LTD). Soluble multimeric form is the main pathogenic species linked to Alzheimer's disease.","definition_xrefs":["GOC:bhm","PMID:18568035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"amyloid-beta complex","synonyms":[{"name":"ADDL complex","type":"narrow"},{"name":"Abeta complex","type":"exact"},{"name":"Abeta-derived diffusible ligand complex","type":"narrow"},{"name":"amyloid beta complex","type":"exact"},{"name":"amyloid beta dimer","type":"narrow"},{"name":"amyloid beta heterodimer","type":"narrow"},{"name":"amyloid beta heterooligomer","type":"narrow"},{"name":"amyloid beta heterotrimer","type":"narrow"},{"name":"amyloid beta homodimer","type":"narrow"},{"name":"amyloid beta homooligomer","type":"narrow"},{"name":"amyloid beta homotrimer","type":"narrow"},{"name":"amyloid beta oligomer","type":"narrow"},{"name":"amyloid beta trimer","type":"narrow"},{"name":"amyloid-beta protein 40 complex","type":"narrow"},{"name":"amyloid-beta protein 40/42 complex","type":"narrow"},{"name":"amyloid-beta protein 42 complex","type":"narrow"},{"name":"beta amyloid complex","type":"exact"},{"name":"beta-amyloid complex","type":"exact"},{"name":"betaA complex","type":"exact"},{"name":"heterodimer of amyloid beta protein","type":"narrow"},{"name":"heterooligomer of amyloid beta protein","type":"narrow"},{"name":"heterotrimer of amyloid beta protein","type":"narrow"},{"name":"homodimer of amyloid beta protein","type":"narrow"},{"name":"homooligomer of amyloid beta protein","type":"narrow"},{"name":"homotrimer of amyloid beta protein","type":"narrow"}],"termid":"GO:0106003"}


id: PBO:0059882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 5","termid":"PBO:0059882"}


id: PBO:0043884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich with EGF like domains 1","termid":"PBO:0043884"}


id: FYPO:0005529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the IRC1L boundary element is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:25972440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to chromatin at boundary element IRC1L","synonyms":[{"name":"normal protein localisation to chromatin at boundary element IRC1L","type":"exact"},{"name":"normal protein localization to centromeric boundary element IRC1L","type":"exact"},{"name":"normal protein localization to chromatin at boundary element IRC1L during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at boundary element IRC1L during vegetative growth","type":"exact"}],"termid":"FYPO:0005529"}


id: MONDO:0016495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete functional variant of Guillain-Barre syndrome (obsolete MONDO:0016495)","secondary_identifiers":["Orphanet:231419"],"synonyms":[{"name":"functional variant of GBS","type":"exact"},{"name":"functional variant of Guillain-Barré syndrome","type":"related"}],"termid":"MONDO:0016495","xrefs":{"Monarch":{"xref_id":"0016495"}}}


id: GO:0075224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of sporangium germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangium germination","termid":"GO:0075223"},{"relation_name":"is_a","term_name":"positive regulation of sporangium development","termid":"GO:0075311"},{"relation_name":"positively_regulates","term_name":"sporangium germination","termid":"GO:0075222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporangium germination","synonyms":[{"name":"positive regulation of sporangium germination on or near host","type":"narrow"}],"termid":"GO:0075224"}


id: GO:0002456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a T cell.","definition_xrefs":["GOC:add","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"},{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell mediated immunity","synonyms":[{"name":"T lymphocyte mediated immunity","type":"exact"},{"name":"T-cell mediated immunity","type":"exact"},{"name":"T-lymphocyte mediated immunity","type":"exact"},{"name":"cell-mediated immunity","type":"broad"},{"name":"cellular immune response","type":"broad"}],"termid":"GO:0002456"}


id: GO:0075065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of symbiont, or the progression of the symbiont from an initial condition to a later condition, occurring in its host's cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete growth or development of symbiont in host cell (obsolete GO:0075065)","synonyms":[{"name":"growth or development of symbiont in host cell","type":"exact"}],"termid":"GO:0075065"}


id: MONDO:0015844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agenesis and aplasia of uterine body","secondary_identifiers":["Orphanet:180142","MEDGEN:1687110","UMLS:C5230999","GARD:20185","icd11.foundation:25664922"],"termid":"MONDO:0015844","xrefs":{"Monarch":{"xref_id":"0015844"}}}


id: FYPO:0002469
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that are longer than normal and taper at one end to a diameter smaller than the other. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, elongated tapered cells (obsolete FYPO:0002469)","synonyms":[{"name":"inviable microcolony, elongated bottle/skittle cells","type":"exact"},{"name":"inviable microcolony, elongated skittle-shaped cells","type":"exact"},{"name":"inviable microcolony, elongated tapered vegetative cells","type":"exact"}],"termid":"FYPO:0002469"}


id: PBO:0053773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1018","termid":"PBO:0053773"}


id: GO:0047823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + D-glutamine = gamma-D-glutamyl-D-glutamate + NH4+. Can also transfer additional glutamyl residues to a peptide, extending the polypeptide chain.","definition_xrefs":["EC:2.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"D-glutamyltransferase activity","secondary_identifiers":["MetaCyc:D-GLUTAMYLTRANSFERASE-RXN","RHEA:35623"],"synonyms":[{"name":"D-gamma-glutamyl transpeptidase activity","type":"related"},{"name":"D-glutamyl transpeptidase activity","type":"related"},{"name":"glutamine:D-glutamyl-peptide 5-glutamyltransferase activity","type":"related"}],"termid":"GO:0047823"}


id: GO:0030182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron differentiation","termid":"GO:0030182"}


id: GO:0010394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving homogalacturonan, a pectin characterized by a backbone of alpha-(1->4)-linked D-galacturonic acid residues that can be methyl-esterified at C-6 and carry acetyl groups on O-2 and O-3.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonan metabolic process","termid":"GO:0010393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"homogalacturonan metabolic process","synonyms":[{"name":"homogalacturonan metabolism","type":"exact"}],"termid":"GO:0010394"}


id: PBO:0063919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma","termid":"PBO:0063919"}


id: GO:0055052
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex for the transport of metabolites into the cell, consisting of 5 subunits: two ATP-binding subunits, two membrane spanning subunits, and one substrate-binding subunit. In organisms with two membranes, the substrate-binding protein moves freely in the periplasmic space and joins the other subunits only when bound with substrate. In organisms with only one membrane the substrate-binding protein is tethered to the cytoplasmic membrane and associated with the other subunits. Transport of the substrate across the membrane is driven by the hydrolysis of ATP.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing","termid":"GO:0055052"}


id: PBO:0003317
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.26.3","termid":"PBO:0003317"}


id: GO:1900237
data:
  {"annotated_genes":["SJAG_05153","SJAG_03346","SJAG_06638","SJAG_03067","SJAG_01113","SJAG_02472","SJAG_03309","SJAG_02066","SJAG_04009","SJAG_00256","SJAG_04206","SJAG_04813"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88171,99834,100837,101730,103706,104788,107416,108942,109174,116664,119492,119493],"is_not":false,"summary":null,"term":"GO:1900237"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of induction of conjugation with cellular fusion.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"},{"relation_name":"positively_regulates","term_name":"induction of conjugation with cellular fusion","termid":"GO:0010514"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00256":null,"SJAG_01113":null,"SJAG_02066":null,"SJAG_02472":null,"SJAG_03067":null,"SJAG_03309":null,"SJAG_03346":null,"SJAG_04009":null,"SJAG_04206":null,"SJAG_04813":null,"SJAG_05153":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"positive regulation of induction of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"up regulation of induction of conjugation with cellular fusion","type":"exact"},{"name":"up-regulation of induction of conjugation with cellular fusion","type":"exact"},{"name":"upregulation of induction of conjugation with cellular fusion","type":"exact"}],"termid":"GO:1900237","terms_by_termid":{"GO:1900237":null}}


id: MONDO:0957337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated chorioretinal dystrophy","secondary_identifiers":["Orphanet:519300","GARD:22096","UMLS:C5681368","MEDGEN:1842795"],"termid":"MONDO:0957337","xrefs":{"Monarch":{"xref_id":"0957337"}}}


id: MONDO:0004728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diabetic retinopathy","termid":"MONDO:0005266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"diabetic macular edema","secondary_identifiers":["DOID:9191","MEDGEN:676494","EFO:0009321","ICD9:362.07","UMLS:C0730285","SCTID:312912001"],"termid":"MONDO:0004728","xrefs":{"Monarch":{"xref_id":"0004728"}}}


id: PBO:0044169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytotoxic T-lymphocyte associated protein 4","termid":"PBO:0044169"}


id: MONDO:1012284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stomach ulcer that occurs in pigs.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach ulcer, non-human animal","termid":"MONDO:1011662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomach ulcer, pig","secondary_identifiers":["OMIA:001027-9823"],"termid":"MONDO:1012284","xrefs":{"Monarch":{"xref_id":"1012284"}}}


id: GO:2000625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of miRNA metabolic process","termid":"GO:2000628"},{"relation_name":"regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of miRNA catabolic process","synonyms":[{"name":"regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000625"}


id: PBO:0059061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 2","termid":"PBO:0059061"}


id: GO:0062132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of L-glutamine biosynthesis.","definition_xrefs":["PMID:19755423","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamine family amino acid metabolic process","termid":"GO:0000820"},{"relation_name":"is_a","term_name":"regulation of amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"L-glutamine biosynthetic process","termid":"GO:1901704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of L-glutamine biosynthetic process","termid":"GO:0062132"}


id: PBO:0063540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet endothelial aggregation receptor 1","termid":"PBO:0063540"}


id: PBO:0046223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 16","termid":"PBO:0046223"}


id: PBO:0055479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2912","termid":"PBO:0055479"}


id: GO:1903520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mammary gland involution.","definition_xrefs":["PMID:23164222","GO_REF:0000058","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tissue remodeling","termid":"GO:0034104"},{"relation_name":"is_a","term_name":"regulation of mammary gland involution","termid":"GO:1903519"},{"relation_name":"negatively_regulates","term_name":"mammary gland involution","termid":"GO:0060056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mammary gland involution","synonyms":[{"name":"down regulation of mammary gland involution","type":"exact"},{"name":"down-regulation of mammary gland involution","type":"exact"},{"name":"downregulation of mammary gland involution","type":"exact"},{"name":"inhibition of mammary gland involution","type":"narrow"}],"termid":"GO:1903520"}


id: GO:0046706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of CDP, cytidine (5'-)diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate catabolic process","termid":"GO:0009195"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"CDP metabolic process","termid":"GO:0046704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"CDP catabolic process","synonyms":[{"name":"CDP breakdown","type":"exact"},{"name":"CDP catabolism","type":"exact"},{"name":"CDP degradation","type":"exact"}],"termid":"GO:0046706"}


id: PBO:0000876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion cytochrome c oxidase assembly protein Cox1101, mitochondrial ribosomal protein Rsm22 (predicted)","termid":"PBO:0000876"}


id: PBO:0039828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase 2","termid":"PBO:0039828"}


id: MONDO:0008554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential thrombocythemia","termid":"MONDO:0005029"},{"relation_name":"is_a","term_name":"familial thrombocytosis","termid":"MONDO:0019111"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocythemia 1","secondary_identifiers":["UMLS:C3277671","OMIM:187950","MEDGEN:479301"],"synonyms":[{"name":"THCYT1","type":"related"},{"name":"thrombocythemia 1","type":"exact"},{"name":"thrombocythemia type 1","type":"exact"},{"name":"thrombocythemia, somatic","type":"exact"},{"name":"thrombocytosis 1","type":"related"}],"termid":"MONDO:0008554","xrefs":{"Monarch":{"xref_id":"0008554"}}}


id: GO:0061901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of 1-phosphatidylinositol-3-kinase activity.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:18723082"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of 1-phosphatidylinositol-3-kinase activity (obsolete GO:0061901)","termid":"GO:0061901"}


id: MONDO:0019609
data:
  {"annotated_genes":["SJAG_02997","SJAG_01165","SJAG_00702","SJAG_04146","SJAG_05950","SJAG_03781","SJAG_02788","SJAG_00891","SJAG_03440","SJAG_03324","SJAG_02619","SJAG_04763","SJAG_02693","SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013948"},{"annotations":[87211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054549"},{"annotations":[87568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013949"},{"annotations":[87566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013950"},{"annotations":[87569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013951"},{"annotations":[87570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013952"},{"annotations":[87527,87528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013967"},{"annotations":[87174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008953"},{"annotations":[87518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011101"},{"annotations":[87163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008954"},{"annotations":[87432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008736"},{"annotations":[87550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013927"},{"annotations":[87552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013930"},{"annotations":[87553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013931"},{"annotations":[87555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013936"},{"annotations":[87557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013937"},{"annotations":[87558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013938"},{"annotations":[87556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013939"},{"annotations":[87561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013942"},{"annotations":[87559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013943"},{"annotations":[87564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013945"},{"annotations":[86635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009959"}]},"cv_name":"mondo","definition":"The most severe variant seen in the peroxisome biogenesis disorders that is characterized by neuronal migration defects in the brain, dysmorphic craniofacial features, profound hypotonia, neonatal seizures, and liver dysfunction.","definition_xrefs":["Orphanet:912"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02788":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04763":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0019053","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"Zellweger spectrum disorders","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:7917","ICD10CM:E71.510","NANDO:1200760","UMLS:C0043459","MEDGEN:21958","MESH:D015211","NCIT:C85239","NORD:1876","SCTID:88469006","DOID:905"],"synonyms":[{"name":"ZS","type":"exact"},{"name":"ZWS","type":"exact"},{"name":"Zellweger leukodystrophy","type":"related"},{"name":"Zellweger spectrum disorders","type":"exact"},{"name":"Zellweger syndrome","type":"exact"},{"name":"cerebrohepatorenal syndrome","type":"exact"},{"name":"congenital iron overload","type":"exact"}],"termid":"MONDO:0019609","terms_by_termid":{"MONDO:0008736":null,"MONDO:0008953":null,"MONDO:0008954":null,"MONDO:0009959":null,"MONDO:0011101":null,"MONDO:0013927":null,"MONDO:0013930":null,"MONDO:0013931":null,"MONDO:0013936":null,"MONDO:0013937":null,"MONDO:0013938":null,"MONDO:0013939":null,"MONDO:0013942":null,"MONDO:0013943":null,"MONDO:0013945":null,"MONDO:0013948":null,"MONDO:0013949":null,"MONDO:0013950":null,"MONDO:0013951":null,"MONDO:0013952":null,"MONDO:0013967":null,"MONDO:0054549":null},"xrefs":{"Monarch":{"xref_id":"0019609"}}}


id: PBO:0047215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 223 member A","termid":"PBO:0047215"}


id: PR:O42977
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rtp1 gene.","definition_xrefs":["UniProtKB:O42977","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II assembly factor rtp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.08c","synonyms":[{"name":"Spom972h-rtp1","type":"exact"}],"termid":"PR:O42977"}


id: PBO:0047717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 8, pseudogene","termid":"PBO:0047717"}


id: MONDO:0100325
data:
  {"annotated_genes":["SJAG_04528"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85539],"is_not":false,"summary":null,"term":"MONDO:0100325"}]},"cv_name":"mondo","definition":"A very rare syndrome associating chondrodysplasia with dentinogenesis imperfecta.","definition_xrefs":["Orphanet:166272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odontochondrodysplasia","termid":"MONDO:0031169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04528":null},"genotype_count":0,"is_obsolete":false,"name":"odontochondrodysplasia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:184260","MEDGEN:1784281","SCTID:717823001","UMLS:C5542277","GARD:8717"],"synonyms":[{"name":"Goldblatt chondrodysplasia","type":"exact"},{"name":"Goldblatt syndrome","type":"exact"},{"name":"ODCD","type":"exact"},{"name":"chondrodysplasia-dentinogenesis imperfecta-joint laxity syndrome","type":"exact"},{"name":"odontochondrodysplasia","type":"broad"},{"name":"spondylometaphyseal dysplasia with dentinogenesis imperfecta","type":"related"}],"termid":"MONDO:0100325","terms_by_termid":{"MONDO:0100325":null},"xrefs":{"Monarch":{"xref_id":"0100325"}}}


id: GO:0071516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The initial formation of a stable single-strand DNA lesion that triggers programmed gene conversion at the mating-type locus, thereby restricting mating-type interconversion to one of the two sister chromatids during DNA replication.","definition_xrefs":["GOC:mah","PMID:18723894"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of imprinting at mating-type locus (obsolete GO:0071516)","synonyms":[{"name":"mating type determination, establishment of imprinting","type":"exact"}],"termid":"GO:0071516"}


id: PBO:0084842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; conserved in metazoa, with similarity to human mitochondrial ribosomal protein MRPL49","termid":"PBO:0084842"}


id: PR:Q9P3T7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial 2-oxodicarboxylate carrier that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR24089:SF76","PRO:DNx","OMA:SCHPO01456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2-oxodicarboxylate carrier (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.09","secondary_identifiers":["UniProtKB:Q9P3T7"],"synonyms":[{"name":"Spom972h-SLC25A21","type":"exact"}],"termid":"PR:Q9P3T7"}


id: GO:0008697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-dehydro-4-deoxy-D-glucuronate = 3-deoxy-D-glycero-2,5-hexodiulosonate.","definition_xrefs":["EC:5.3.1.17","RHEA:23896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity","secondary_identifiers":["MetaCyc:5.3.1.17-RXN","KEGG_REACTION:R04383"],"synonyms":[{"name":"4-deoxy-L-threo-5-hexosulose-uronate aldose-ketose-isomerase activity","type":"related"},{"name":"4-deoxy-L-threo-5-hexulose uronate isomerase activity","type":"related"},{"name":"5-keto-4-deoxyuronate isomerase activity","type":"related"}],"termid":"GO:0008697"}


id: FYPO:0003664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which mRNA 5'-diphosphatase activity is absent.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal RNA pyrophosphohydrolase activity","termid":"FYPO:0003663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished mRNA 5'-diphosphatase activity","synonyms":[{"name":"RNA pyrophosphohydrolase activity abolished","type":"exact"},{"name":"abolished RNA pyrophosphohydrolase activity","type":"related"}],"termid":"FYPO:0003664"}


id: GO:1902441
data:
  {"annotated_genes":["SJAG_04901","SJAG_03915","SJAG_02529"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91624,97202,114315],"is_not":false,"summary":null,"term":"GO:1902441"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a meiotic spindle pole body.","definition_xrefs":["PMID:20833892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle pole body","termid":"GO:0071988"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic spindle pole body organization","termid":"GO:1990395"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02529":null,"SJAG_03915":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0007049","GO:0051179","GO:0000226"],"is_obsolete":false,"name":"protein localization to meiotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990945","GO:1990954"],"synonyms":[{"name":"establishment of protein localization to meiotic spindle pole body","type":"narrow"},{"name":"protein localisation in meiotic spindle pole body","type":"exact"},{"name":"protein localisation to meiotic spindle pole body","type":"exact"},{"name":"protein localization in meiotic spindle pole body","type":"exact"},{"name":"protein location to meiotic spindle pole body","type":"exact"}],"termid":"GO:1902441","terms_by_termid":{"GO:1902441":null}}


id: PR:Q10152
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1D4.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1D4.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.07c","synonyms":[{"name":"Spom972h-SPAC1D4.07c","type":"exact"}],"termid":"PR:Q10152"}


id: FYPO:0004199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is increased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein degradation during vegetative growth","termid":"FYPO:0000847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased protein degradation during mitosis","synonyms":[{"name":"increased protein breakdown during mitosis","type":"exact"},{"name":"increased protein catabolic process during mitosis","type":"exact"},{"name":"increased protein catabolism during mitosis","type":"exact"},{"name":"increased protein degradation during mitosis during mitotic cell cycle","type":"related"},{"name":"increased protein degradation during mitosis during vegetative growth","type":"exact"},{"name":"increased protein degradation during mitotic M phase","type":"related"},{"name":"increased protein degradation during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004199"}


id: MONDO:0004295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma arising in the lung due to exposure to asbestos.","definition_xrefs":["NCIT:C27925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung carcinoma","termid":"MONDO:0005138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"asbestos-related lung carcinoma","secondary_identifiers":["DOID:7596","MEDGEN:231080","UMLS:C1332337"],"synonyms":[{"name":"asbestos-related lung cancer","type":"exact"},{"name":"asbestos-related lung carcinoma","type":"exact"}],"termid":"MONDO:0004295","xrefs":{"Monarch":{"xref_id":"0004295"}}}


id: SO:0000732
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an unverified region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted","secondary_identifiers":["http://en.wikipedia.org/wiki/Predicted"],"termid":"SO:0000732"}


id: PBO:0076556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymus, brain and testes associated","termid":"PBO:0076556"}


id: MONDO:0011868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lethal congenital contracture syndrome type 2 is a rare arthrogryposis syndrome characterized by multiple congenital contactures (typically extended elbows and flexed knees), micrognathia, anterior horn cell degeneration, skeletal muscle atrophy (mainly in the lower limbs), presence of a markedly distended urinary bladder and absence of hydrops, pterygia and bone fractures. Other craniofacial (e.g. cleft palate, facial palsy) and ocular (e.g. anisocoria, retinal detachment) anomalies may be additionally observed. The disease is usually neonatally lethal however, survival into adolescence has been reported.","definition_xrefs":["Orphanet:137776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 2","secondary_identifiers":["UMLS:C1843478","MESH:C564369","MEDGEN:334413","SCTID:715419004","DOID:0060560","GARD:9177","OMIM:607598"],"synonyms":[{"name":"ERBB3 lethal congenital contracture syndrome","type":"exact"},{"name":"LCCS2","type":"exact"},{"name":"lethal congenital contractural syndrome 2","type":"exact"},{"name":"lethal congenital contracture syndrome 2","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in ERBB3","type":"exact"},{"name":"lethal congenital contracture syndrome type 2","type":"exact"},{"name":"multiple contracture syndrome, Israeli Bedouin type","type":"related"},{"name":"multiple contracture syndrome, Israeli Bedouin type a","type":"related"},{"name":"multiple contracture syndrome, Israeli-Bedouin type","type":"exact"}],"termid":"MONDO:0011868","xrefs":{"Monarch":{"xref_id":"0011868"}}}


id: PBO:0044278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 2","termid":"PBO:0044278"}


id: PBO:0051065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 4-17","termid":"PBO:0051065"}


id: PBO:0029373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_medial_cortex_during_vegetative_growth,_with_protein_distributed_in_non-growing_half_of_cell","termid":"PBO:0029373"}


id: PATO:0000447
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000447 decreased percentage (obsolete PATO:0000447)","termid":"PATO:0000447"}


id: PBO:0066757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 55","termid":"PBO:0066757"}


id: PBO:0066925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 227","termid":"PBO:0066925"}


id: PBO:0053071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LBH domain containing 2","termid":"PBO:0053071"}


id: MONDO:0011807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus with hemolytic anemia, susceptibility to, 1","secondary_identifiers":["MEDGEN:375913","OMIM:607279","UMLS:C1846533"],"synonyms":[{"name":"SLEH1","type":"exact"},{"name":"systemic lupus erythematosus with hemolytic anaemia","type":"exact"},{"name":"systemic lupus erythematosus with hemolytic anemia","type":"exact"},{"name":"systemic lupus erythematosus with hemolytic anemia, susceptibility to, 1","type":"exact"},{"name":"systemic lupus erythematosus, hemolytic Anemia-related","type":"exact"}],"termid":"MONDO:0011807","xrefs":{"Monarch":{"xref_id":"0011807"}}}


id: MONDO:0957229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hatipoglu immunodeficiency syndrome","secondary_identifiers":["UMLS:C5830439","MEDGEN:1841075","OMIM:620331"],"termid":"MONDO:0957229","xrefs":{"Monarch":{"xref_id":"0957229"}}}


id: PBO:0086788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; physical interaction with Atg27p suggests a possible role in autophagy","termid":"PBO:0086788"}


id: GO:1903061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein lipidation.","definition_xrefs":["PMID:21909394","GO_REF:0000058","GOC:rph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"positive regulation of lipoprotein metabolic process","termid":"GO:0050747"},{"relation_name":"is_a","term_name":"regulation of protein lipidation","termid":"GO:1903059"},{"relation_name":"positively_regulates","term_name":"protein lipidation","termid":"GO:0006497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein lipidation","synonyms":[{"name":"activation of lipid:protein modification","type":"narrow"},{"name":"activation of protein amino acid lipidation","type":"narrow"},{"name":"activation of protein lipidation","type":"narrow"},{"name":"positive regulation of lipid:protein modification","type":"exact"},{"name":"positive regulation of protein amino acid lipidation","type":"exact"},{"name":"up regulation of lipid:protein modification","type":"exact"},{"name":"up regulation of protein amino acid lipidation","type":"exact"},{"name":"up regulation of protein lipidation","type":"exact"},{"name":"up-regulation of lipid:protein modification","type":"exact"},{"name":"up-regulation of protein amino acid lipidation","type":"exact"},{"name":"up-regulation of protein lipidation","type":"exact"},{"name":"upregulation of lipid:protein modification","type":"exact"},{"name":"upregulation of protein amino acid lipidation","type":"exact"},{"name":"upregulation of protein lipidation","type":"exact"}],"termid":"GO:1903061"}


id: FYECO:0000415
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which tea tree oil was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ tea tree oil","synonyms":[{"name":"tea tree oil added","type":"exact"}],"termid":"FYECO:0000415"}


id: FYPO:0000292
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects any nucleic acid metabolic process.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype","termid":"FYPO:0000140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"nucleic acid metabolism phenotype","synonyms":[{"name":"fission yeast nucleic acid metabolism phenotype","type":"exact"}],"termid":"FYPO:0000292"}


id: PR:Q9USL4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup61 gene.","definition_xrefs":["UniProtKB:Q9USL4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup61 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.07c","synonyms":[{"name":"Spom972h-nup61","type":"exact"},{"name":"nuclear pore protein nup61 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USL4"}


