# terms

id: GO:0044856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which plasma membrane rafts are transported to, or maintained in, a specific location.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"membrane raft localization","termid":"GO:0051665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"plasma membrane raft localization","termid":"GO:0044856"}


id: PBO:0029277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ubiquitin_ligase_activity_during_mitotic_metaphase","termid":"PBO:0029277"}


id: PBO:0051146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-25 (pseudogene)","termid":"PBO:0051146"}


id: PBO:0069078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 325, pseudogene","termid":"PBO:0069078"}


id: GO:0042853
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68957],"is_not":false,"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-alanine, the L-enantiomer of 2-aminopropanoic acid, i.e. (2S)-2-aminopropanoic acid.","definition_xrefs":["GOC:jsg","GOC:mah","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine catabolic process","termid":"GO:0006524"},{"relation_name":"is_a","term_name":"pyruvate family amino acid catabolic process","termid":"GO:0009080"},{"relation_name":"is_a","term_name":"L-alanine metabolic process","termid":"GO:0042851"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-alanine catabolic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"L-alanine breakdown","type":"exact"},{"name":"L-alanine catabolism","type":"exact"},{"name":"L-alanine degradation","type":"exact"}],"termid":"GO:0042853","terms_by_termid":{"GO:0042853":null}}


id: PBO:0001357
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin fusion degradation protein","termid":"PBO:0001357"}


id: GO:0044422
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete organelle part (obsolete GO:0044422)","termid":"GO:0044422"}


id: MONDO:1011966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia with craniofacial deformity and disproportionate dwarfism, non-human animal","secondary_identifiers":["OMIA:001903"],"termid":"MONDO:1011966","xrefs":{"Monarch":{"xref_id":"1011966"}}}


id: PBO:0033756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spindle_pole_body","termid":"PBO:0033756"}


id: PBO:0084035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored cell surface glycoprotein (flocculin); required for pseudohyphal and invasive growth, flocculation, and biofilm formation; major determinant of colony morphology; QTL that controls chronological life span; carries intragenic tandem repeats that are expanded in different strains; required for formation of fibrous interconnections between cells; role in co-flocculation with other yeast species; cleaved and shed from cells, contributing to their surface properties","termid":"PBO:0084035"}


id: MOD:00087
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-myristoyl-L-lysine.","definition_xrefs":["OMSSA:81","RESID:AA0078","Unimod:45#K","PubMed:1402651","PubMed:8346241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-myristoylated residue","termid":"MOD:00650"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01875","MOD:01155"],"is_obsolete":false,"name":"N6-myristoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(tetradecanoylamino)hexanoic acid","type":"exact"},{"name":"2-amino-6-(tetradecanamido)hexanoic acid","type":"exact"},{"name":"LIPID N6-myristoyl lysine","type":"exact"},{"name":"Myristoyl","type":"related"},{"name":"Myristoylation","type":"related"},{"name":"N(zeta)-myristoyllysine","type":"exact"},{"name":"N6-(1-oxotetradecyl)-L-lysine","type":"exact"},{"name":"N6-(C14:0 aliphatic acyl)lysine","type":"exact"},{"name":"N6-myristoyl-L-lysine","type":"exact"},{"name":"N6-myristoylated L-lysine","type":"exact"},{"name":"N6MyrLys","type":"exact"},{"name":"epsilon-myristoyllysine","type":"exact"},{"name":"myristoylationk","type":"exact"}],"termid":"MOD:00087"}


id: PBO:0070174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 88 pseudogene","termid":"PBO:0070174"}


id: GO:0097309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Methylation of the ribose of the first nucleotide of a 5'-capped mRNA.","definition_xrefs":["GOC:sp","PMID:20713356"],"gene_count":0,"genotype_count":0,"name":"obsolete cap1 mRNA methylation (obsolete GO:0097309)","synonyms":[{"name":"cap1 mRNA capping","type":"broad"}],"termid":"GO:0097309"}


id: MONDO:0024889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm of the female reproductive system arising from mesonephric remnants.","definition_xrefs":["NCIT:C4294"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign reproductive system neoplasm","termid":"MONDO:0000383"},{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"},{"relation_name":"is_a","term_name":"mesonephric neoplasm","termid":"MONDO:0024888"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"benign mesonephroma","secondary_identifiers":["UMLS:C0334530","ICDO:9110/0","DOID:2616","MEDGEN:87259"],"synonyms":[{"name":"Mesonephroma, benign","type":"exact"},{"name":"Mesonephroma, benign (morphologic abnormality)","type":"exact"},{"name":"Wolffian duct adenoma","type":"exact"},{"name":"benign Mesonephroma","type":"exact"},{"name":"benign mesonephric neoplasm","type":"exact"},{"name":"mesonephric adenoma","type":"exact"},{"name":"mesonephric duct adenoma","type":"exact"},{"name":"mesonephric neoplasm, benign","type":"exact"}],"termid":"MONDO:0024889","xrefs":{"Monarch":{"xref_id":"0024889"}}}


id: GO:1990411
data:
  {"annotated_genes":["SJAG_03856"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111916],"is_not":false,"summary":null,"term":"GO:1990411"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hercynylcysteine sulfoxide + 2H+ = ergothioneine + pyruvate + ammonium.","definition_xrefs":["PMID:24828577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"hercynylcysteine sulfoxide lyase activity (ergothioneine-forming)","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:42688","MetaCyc:RXN-14428"],"termid":"GO:1990411","terms_by_termid":{"GO:1990411":null}}


id: GO:0036052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a uropod. A uropod is a membrane projection with related cytoskeletal components at the trailing edge of a migrating cell.","definition_xrefs":["GOC:pf","ISBN:0781735149","PMID:12787750","PMID:12714569","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to trailing edge","termid":"GO:0036051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to uropod","synonyms":[{"name":"protein localisation to uropod","type":"exact"}],"termid":"GO:0036052"}


id: PBO:0087603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CCR4-NOT1 core complex; this complex has multiple roles in the regulation of mRNA levels including regulation of transcription and destabilization of mRNA by deadenylation; basal transcription factor that increases initiation and elongation; activates the ATPase activity of Dhh1p, resulting in processing body disassembly","termid":"PBO:0087603"}


id: GO:1904720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mRNA endonucleolytic cleavage involved in unfolded protein response.","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:19328063","PMID:20625543","GO_REF:0000058","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mRNA endonucleolytic cleavage involved in unfolded protein response (obsolete GO:1904720)","synonyms":[{"name":"regulation of HAC1 mRNA cleavage","type":"narrow"},{"name":"regulation of HAC1-type intron splice site recognition and cleavage","type":"narrow"},{"name":"regulation of IRE1-mediated XBP-1 mRNA cleavage","type":"narrow"},{"name":"regulation of XBP1 mRNA cleavage","type":"narrow"}],"termid":"GO:1904720"}


id: MONDO:0012529
data:
  {"annotated_genes":["SJAG_02585","SJAG_00468"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86182,86183],"is_not":false,"summary":null,"term":"MONDO:0012529"}]},"cv_name":"mondo","definition":"Any Diamond-Blackfan anemia in which the cause of the disease is a mutation in the RPS24 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00468":null,"SJAG_02585":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:387892","DOID:0111887","NCIT:C176912","OMIM:610629","UMLS:C1857719","MESH:C536355","GARD:10241"],"synonyms":[{"name":"DBA3","type":"related"},{"name":"Diamond-Blackfan Anaemia type 3","type":"exact"},{"name":"Diamond-Blackfan Anemia type 3","type":"exact"},{"name":"Diamond-Blackfan anaemia caused by mutation in RPS24","type":"exact"},{"name":"Diamond-Blackfan anemia 3","type":"exact"},{"name":"Diamond-Blackfan anemia caused by mutation in RPS24","type":"exact"},{"name":"RPS24 Diamond-Blackfan anaemia","type":"exact"},{"name":"RPS24 Diamond-Blackfan anemia","type":"exact"},{"name":"anaemia Diamond-Blackfan 3","type":"related"},{"name":"anemia Diamond-Blackfan 3","type":"related"}],"termid":"MONDO:0012529","terms_by_termid":{"MONDO:0012529":null},"xrefs":{"Monarch":{"xref_id":"0012529"}}}


id: PBO:0072230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 5","termid":"PBO:0072230"}


id: GO:0023054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a stretch signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by stretch effect (obsolete GO:0023054)","synonyms":[{"name":"signal initiation by stretch effect","type":"exact"}],"termid":"GO:0023054"}


id: MONDO:0014358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AHDC1-related intellectual disability - obstructive sleep apnea - mild dysmorphism syndrome","secondary_identifiers":["MEDGEN:862856","OMIM:615829","GARD:13409","Orphanet:412069","DOID:0070055","UMLS:C4014419"],"synonyms":[{"name":"AHDC1-related intellectual disability - obstructive sleep apnea - mild dysmorphism syndrome","type":"exact"},{"name":"MRD25","type":"exact"},{"name":"Xia-Gibbs syndrome","type":"exact"},{"name":"autosomal dominant intellectual disability 25","type":"exact"},{"name":"autosomal dominant mental retardation 25","type":"exact"},{"name":"intellectual disability, autosomal dominant 25","type":"related"},{"name":"mental retardation, autosomal dominant 25","type":"related"}],"termid":"MONDO:0014358","xrefs":{"Monarch":{"xref_id":"0014358"}}}


id: SO:0002056
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intronic splicing regulatory element that functions to recruit trans acting splicing factors suppress the transcription of the gene or genes they control.","definition_xrefs":["SO:ke","PMID:23241926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silencer","termid":"SO:0000625"},{"relation_name":"part_of","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intronic_splicing_silencer","synonyms":[{"name":"ISS","type":"exact"},{"name":"intronic splicing silencer","type":"exact"}],"termid":"SO:0002056"}


id: MONDO:0002424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant epithelial neoplasm that arises from the rectosigmoid area and invades through the muscularis mucosa into the submucosa. The vast majority are adenocarcinomas. About 50% of colorectal carcinomas occur in the rectosigmoid area.","definition_xrefs":["NCIT:C7421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon carcinoma","termid":"MONDO:0002032"},{"relation_name":"is_a","term_name":"rectosigmoid junction cancer","termid":"MONDO:0002425"},{"relation_name":"is_a","term_name":"rectal carcinoma","termid":"MONDO:0044937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"rectosigmoid carcinoma","secondary_identifiers":["MEDGEN:232963","UMLS:C1327709","DOID:2781"],"synonyms":[{"name":"carcinoma of rectosigmoid junction","type":"exact"},{"name":"rectosigmoid cancer","type":"exact"},{"name":"rectosigmoid carcinoma","type":"exact"},{"name":"rectosigmoid junction carcinoma","type":"exact"}],"termid":"MONDO:0002424","xrefs":{"Monarch":{"xref_id":"0002424"}}}


id: MONDO:0006824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carcinoma having known association to krebs2 gene mutation","definition_xrefs":["EFO:1001007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Krebs 2 carcinoma","secondary_identifiers":["MEDGEN:2842","MESH:D002287","UMLS:C0007128"],"termid":"MONDO:0006824","xrefs":{"Monarch":{"xref_id":"0006824"}}}


id: FYPO:0000871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"},{"relation_name":"is_a","term_name":"increased histone methylation during vegetative growth","termid":"FYPO:0000869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 methylation during vegetative growth","synonyms":[{"name":"increased histone H3 K9 methylation during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 methylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9me during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000871"}


id: GO:0042699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by follicle-stimulating hormone binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"follicle-stimulating hormone signaling pathway","synonyms":[{"name":"follicle stimulating hormone signaling pathway","type":"exact"},{"name":"follicle stimulating hormone signalling pathway","type":"exact"},{"name":"follicle-stimulating hormone signalling pathway","type":"exact"}],"termid":"GO:0042699"}


id: SO:0002298
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An operon whose transcription is coordinated on a single transcription unit.","definition_xrefs":["PMID:32665585","Bacterial_regulation_working_group:CMA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"operon","termid":"SO:0000178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simple_operon","synonyms":[{"name":"simple operon","type":"exact"}],"termid":"SO:0002298"}


id: PBO:0067258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 332, pseudogene","termid":"PBO:0067258"}


id: PBO:0076065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STPG2 antisense RNA 1","termid":"PBO:0076065"}


id: PBO:0090727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBDS family ribosome assembly protein Sdo1","termid":"PBO:0090727"}


id: PBO:0003808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP/GTP exchange factor, WD repeat protein Spo14","termid":"PBO:0003808"}


id: MONDO:0004014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare meningioma that arises as a primary ectopic tumor in the ethmoid sinus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethmoidal sinus neoplasm","termid":"MONDO:0001764"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethmoid sinus ectopic meningioma","secondary_identifiers":["UMLS:C1333475","MEDGEN:232473","DOID:6854","NCIT:C5309"],"synonyms":[{"name":"ethmoid sinus primary ectopic meningioma","type":"exact"},{"name":"ethmoidal sinus primary ectopic meningioma","type":"exact"},{"name":"primary ectopic meningioma of ethmoid sinus","type":"exact"},{"name":"primary ectopic meningioma of ethmoidal sinus","type":"exact"},{"name":"primary ectopic meningioma of the ethmoid sinus","type":"exact"},{"name":"primary ectopic meningioma of the ethmoidal sinus","type":"exact"}],"termid":"MONDO:0004014","xrefs":{"Monarch":{"xref_id":"0004014"}}}


id: GO:0005301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete valine/tyrosine/tryptophan permease activity (obsolete GO:0005301)","synonyms":[{"name":"hydrogen/valine-tyrosine-tryptophan transporter","type":"exact"},{"name":"valine/tyrosine/tryptophan permease activity","type":"exact"}],"termid":"GO:0005301"}


id: PBO:0082247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p); capping protein (CP) binds to the barbed ends of actin filaments preventing further polymerization; localized predominantly to cortical actin patches; protein increases in abundance and relocalizes from bud neck to plasma membrane upon DNA replication stress","termid":"PBO:0082247"}


id: GO:0106327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-O-[N-acetyl-alpha-D-galactosaminyl]-L-threonyl-[protein] + UDP-N-acetyl-alpha-D-glucosamine = 3-O-[N-acetyl-beta-D-glucosaminyl-(1->3)-N-acetyl-alpha-D-galactosaminyl]-L-threonyl-[protein] + H+ + UDP.","definition_xrefs":["RHEA:46880"],"gene_count":0,"genotype_count":0,"name":"obsolete acetylgalactosaminyl-O-glycosyl-threonyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity (obsolete GO:0106327)","termid":"GO:0106327"}


id: GO:0018058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidative deamination of the alpha carbon of an encoded N-terminal amino acid, to form pyruvic acid retaining an amide bond between its 1-carboxyl group and the adjacent residue. The pyruvate 2-oxo group may become an enzyme active site, or it may be reduced to an alcohol.","definition_xrefs":["RESID:AA0128","RESID:AA0127","RESID:AA0129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"protein deamination","termid":"GO:0018277"},{"relation_name":"is_a","term_name":"N-terminal protein amino acid deamination","termid":"GO:0031363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal protein amino acid deamination, from amino carbon","termid":"GO:0018058"}


id: PBO:0043321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP-Gly domain containing linker protein 3","termid":"PBO:0043321"}


id: PR:000046671
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor sre2 (Schizosaccharomyces pombe) that has not been processed by proteolytic cleavage.","definition_xrefs":["PMID:23729666","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor sre2 (Schizosaccharomyces pombe)","termid":"PR:000046670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sre2P","pombase_gene_id":"SPBC354.05c","synonyms":[{"name":"PomBase_original_PRO_term_name: transcription factor sre2, Sre2P form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-sre2/Sre2P","type":"exact"},{"name":"Sre2P","type":"exact"},{"name":"sre2 precursor (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000046671"}


id: PBO:0083923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fructose-1,6-bisphosphatase; key regulatory enzyme in the gluconeogenesis pathway, required for glucose metabolism; undergoes either proteasome-mediated or autophagy-mediated degradation depending on growth conditions; glucose starvation results in redistribution to the periplasm; interacts with Vid30p","termid":"PBO:0083923"}


id: FYPO:0000526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of pexophagy is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased peroxisome degradation","synonyms":[{"name":"decreased pexophagy","type":"exact"},{"name":"pexophagy: decreased","type":"related"},{"name":"reduced peroxisome degradation","type":"exact"}],"termid":"FYPO:0000526"}


id: GO:0006110
data:
  {"annotated_genes":["SJAG_02785","SJAG_00685","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70459],"is_not":false,"summary":null,"term":"GO:0006110"},{"annotations":[73415,76373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glycolysis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleotide catabolic process","termid":"GO:0033121"},{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of ATP metabolic process","termid":"GO:1903578"},{"relation_name":"regulates","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_02785":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0008150","GO:0055086","GO:0005975"],"is_obsolete":false,"name":"regulation of glycolytic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0090525","Reactome:R-HSA-170822"],"synonyms":[{"name":"regulation of glycolysis involved in cellular glucose homeostasis","type":"exact"}],"termid":"GO:0006110","terms_by_termid":{"GO:0006110":null,"GO:0045820":null}}


id: GO:0003922
data:
  {"annotated_genes":["SJAG_04634","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93754],"is_not":false,"summary":null,"term":"GO:0003922"},{"annotations":[75080],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0003921"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + XMP + L-glutamine + H2O = AMP + diphosphate + GMP + L-glutamate + 2H+.","definition_xrefs":["RHEA:11680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00964":null,"SJAG_04634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"GMP synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73792","Reactome:R-HSA-9748957","MetaCyc:GMP-SYN-GLUT-RXN","Wikipedia:GMP_synthase_(glutamine-hydrolysing)","EC:6.3.5.2"],"synonyms":[{"name":"GMP synthase (glutamine-hydrolysing)","type":"related"},{"name":"GMP synthetase (glutamine-hydrolysing)","type":"related"},{"name":"GMP synthetase (glutamine-hydrolyzing) activity","type":"related"},{"name":"glutamine amidotransferase activity","type":"related"},{"name":"guanosine 5'-monophosphate synthetase activity","type":"related"},{"name":"guanosine monophosphate synthetase (glutamine-hydrolyzing)","type":"related"},{"name":"guanylate synthetase (glutamine-hydrolyzing)","type":"related"},{"name":"xanthosine 5'-phosphate amidotransferase activity","type":"related"},{"name":"xanthosine-5'-phosphate:L-glutamine amido-ligase (AMP-forming)","type":"related"}],"termid":"GO:0003922","terms_by_termid":{"GO:0003921":null,"GO:0003922":null}}


id: PBO:0080904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 4","termid":"PBO:0080904"}


id: PBO:0048691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI pathogenesis related 2","termid":"PBO:0048691"}


id: GO:0030368
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with any member of the interleukin-17 family of cytokines and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:add","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-17 receptor activity","secondary_identifiers":["Wikipedia:Interleukin-17_receptor"],"synonyms":[{"name":"IL-17 receptor activity","type":"exact"},{"name":"IL-17R","type":"exact"}],"termid":"GO:0030368"}


id: FYPO:0004467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is normal (i.e. indistinguishable from wild type) during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to cell tip during cellular response to salt stress","synonyms":[{"name":"normal protein localisation to cell tip during cellular response to salt stress","type":"exact"},{"name":"normal protein localization to cell end during cellular response to salt stress","type":"exact"},{"name":"normal protein localization to cell tip during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cell tip during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0004467"}


id: GO:1902606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of large conductance calcium-activated potassium channel activity.","definition_xrefs":["GOC:TermGenie","PMID:23407708","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of large conductance calcium-activated potassium channel activity (obsolete GO:1902606)","synonyms":[{"name":"regulation of BK KCa channels","type":"exact"},{"name":"regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"regulation of BK channel activity","type":"related"},{"name":"regulation of large conductance KCa channels","type":"exact"}],"termid":"GO:1902606"}


id: PBO:0004075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related kinase Nak1","termid":"PBO:0004075"}


id: MONDO:0006156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that arises from the colon. It is characterized by the presence of serrated glands and the absence of generalized dysplasia. Some authors have suggested that it is a precursor lesion for some colonic adenocarcinomas with microsatellite instability.","definition_xrefs":["NCIT:C96464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenoma","termid":"MONDO:0000527"},{"relation_name":"is_a","term_name":"colorectal sessile serrated adenoma/polyp","termid":"MONDO:0006164"},{"relation_name":"is_a","term_name":"polyp of colon","termid":"MONDO:0021400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colon sessile serrated adenoma/polyp","secondary_identifiers":["EFO:1000189","MEDGEN:474424","UMLS:C3272791"],"synonyms":[{"name":"colon SSA","type":"exact"},{"name":"colon SSA/P","type":"exact"},{"name":"colon SSP","type":"exact"},{"name":"colon sessile serrated adenoma","type":"exact"},{"name":"colon sessile serrated adenoma/polyp","type":"exact"},{"name":"colon sessile serrated polyp","type":"exact"}],"termid":"MONDO:0006156","xrefs":{"Monarch":{"xref_id":"0006156"}}}


id: PBO:0068377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 170","termid":"PBO:0068377"}


id: PBO:0055542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2978","termid":"PBO:0055542"}


id: MONDO:0009222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gollop-Wolfgang complex is a very rare malformation characterized by ectrodactyly of the hand and ipsilateral bifurcation of the femur.","definition_xrefs":["Orphanet:1986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Gollop-Wolfgang complex","secondary_identifiers":["OMIM:228250","MESH:C537917","MEDGEN:341622","SCTID:716006003","UMLS:C1856789","GARD:2285"],"synonyms":[{"name":"GWC","type":"related"},{"name":"Gollop-Wolfgang complex","type":"exact"},{"name":"bifid femur-monodactylous ectrodactyly syndrome","type":"exact"},{"name":"femur bifid with monodactylous ectrodactyly","type":"related"},{"name":"femur, unilateral bifid, with monodactylous ectrodactyly","type":"related"}],"termid":"MONDO:0009222","xrefs":{"Monarch":{"xref_id":"0009222"}}}


id: GO:0030514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the BMP signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of BMP signaling pathway","termid":"GO:0030510"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090101"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"},{"relation_name":"negatively_regulates","term_name":"BMP signaling pathway","termid":"GO:0030509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of BMP signaling pathway","secondary_identifiers":["GO:0090099"],"synonyms":[{"name":"down regulation of BMP signaling pathway","type":"exact"},{"name":"down-regulation of BMP signaling pathway","type":"exact"},{"name":"downregulation of BMP signaling pathway","type":"exact"},{"name":"inhibition of BMP signaling pathway","type":"narrow"},{"name":"negative regulation of BMP receptor signaling pathway","type":"related"},{"name":"negative regulation of BMP signalling pathway","type":"exact"},{"name":"negative regulation of bone morphogenetic protein signaling pathway","type":"exact"},{"name":"negative regulation of bone morphogenetic protein signalling pathway","type":"exact"},{"name":"negative regulation of decapentaplegic receptor signaling pathway","type":"narrow"},{"name":"negative regulation of decapentaplegic receptor signalling pathway","type":"narrow"},{"name":"negative regulation of decapentaplegic signaling pathway","type":"narrow"}],"termid":"GO:0030514"}


id: CHEBI:16284
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dATP","termid":"CHEBI:16284"}


id: PBO:0067740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 39","termid":"PBO:0067740"}


id: PBO:0048519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase domain containing 2","termid":"PBO:0048519"}


id: GO:0002586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002580"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"regulation of peptide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002586"}


id: PBO:0056834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase","termid":"PBO:0056834"}


id: PBO:0116648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 2 binding protein pseudogene 3","termid":"PBO:0116648"}


id: PBO:0002061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH dehydrogenase (predicted)","termid":"PBO:0002061"}


id: MONDO:0004796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the meninges of the brain and/or spinal cord caused by an infectious agent (viral, bacterial, or fungal). Symptoms include headache, fever, vomiting, neck stiffness, photophobia, confusion, and seizures.","definition_xrefs":["NCIT:C79598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningitis","termid":"MONDO:0021108"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious meningitis","secondary_identifiers":["DOID:9471","HP:0001287","EFO:0000584","ICD9:321.8","ICD9:322.9","SCTID:312216007","MEDGEN:152668","ICD9:322","UMLS:C0729584"],"synonyms":[{"name":"infectious meningitis","type":"exact"},{"name":"infective meningitis","type":"exact"},{"name":"meningitis","type":"related"}],"termid":"MONDO:0004796","xrefs":{"Monarch":{"xref_id":"0004796"}}}


id: MONDO:0001042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tendinitis that involves the patella.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tendinitis","termid":"MONDO:0004857"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"patellar tendinitis","secondary_identifiers":["ICD10CM:M76.5","DOID:10471","SCTID:37785001","ICD9:726.64","icd11.foundation:1366847963","MEDGEN:510513","UMLS:C0158317"],"synonyms":[{"name":"patella tendinitis","type":"exact"},{"name":"patellar tendonitis","type":"exact"},{"name":"tendinitis of patella","type":"exact"}],"termid":"MONDO:0001042","xrefs":{"Monarch":{"xref_id":"0001042"}}}


id: GO:0010773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of strand exchange proteins (recombinases) to form higher order oligomers on single-stranded DNA resulting in meiotic gene conversion. Meiotic gene conversion is the cell cycle process in which genetic information is transferred from one helix to another.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA recombinase assembly","termid":"GO:0000707"},{"relation_name":"part_of","term_name":"meiotic gene conversion","termid":"GO:0006311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0007049","GO:0006281","GO:0044085","GO:0006310","GO:0006259","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"meiotic DNA recombinase assembly involved in meiotic gene conversion","termid":"GO:0010773"}


id: SO:0002200
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A (unitary) pseudogene that is stable in the population but importantly it has a functional alternative allele also in the population. i.e., one strain may have the gene, another strain may have the pseudogene. MHC haplotypes have allelic pseudogenes.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_tRNA","termid":"SO:0000778"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allelic_pseudogenic_tRNA","synonyms":[{"name":"INSDC_feature:tRNA","type":"exact"},{"name":"INSDC_qualifier:allelic","type":"exact"},{"name":"allelic pseudogenic tRNA","type":"exact"}],"termid":"SO:0002200"}


id: PBO:0077139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TJAP1 pseudogene 1","termid":"PBO:0077139"}


id: FYPO:0004721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which minus-end specific microtubule depolymerization, i.e. the removal of tubulin dimers from the minus end of a microtubule, occurs at a lower rate, or speed, than normal.","definition_xrefs":["PomBase:mah","GO:0036078"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased rate of microtubule depolymerization at minus end (obsolete FYPO:0004721)","synonyms":[{"name":"decreased microtubule depolymerization rate at minus end","type":"exact"},{"name":"decreased microtubule minus end shrinkage","type":"related"},{"name":"decreased rate of microtubule catastrophe at minus end","type":"related"},{"name":"decreased rate of microtubule depolymerisation at minus end","type":"exact"},{"name":"decreased rate of microtubule depolymerization at minus end during mitotic cell cycle","type":"related"},{"name":"decreased rate of microtubule depolymerization at minus end during vegetative growth","type":"exact"},{"name":"decreased rate of minus-end specific microtubule depolymerization","type":"exact"},{"name":"increased microtubule stability","type":"related"},{"name":"reduced rate of microtubule depolymerization at minus end","type":"exact"}],"termid":"FYPO:0004721"}


id: PBO:0091391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human HAPSTR1 ortholog, stress response protein","termid":"PBO:0091391"}


id: GO:1990160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex consisting of the helicase loading complex DnaB-DnaC, replication restart proteins Rep and PriC, and associated DNA. Involved in the restart of DNA replication after a stalled replication fork has been repaired.","definition_xrefs":["GOC:bhm","PMID:8663105","PMID:19941825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-primosome complex","termid":"GO:1990099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"DnaB-DnaC-Rep-PriC complex","synonyms":[{"name":"DnaB-DnaC-Rep-PriC preprimosome","type":"exact"},{"name":"phi-X174-type preprimosome","type":"related"}],"termid":"GO:1990160"}


id: MONDO:0019182
data:
  {"annotated_genes":["SJAG_04398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic developmental defect during embryogenesis (obsolete MONDO:0015960)","termid":"MONDO:0015960"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"obesity disorder","termid":"MONDO:0011122"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04398":null},"genotype_count":0,"is_obsolete":false,"name":"inherited obesity","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:885912","OMIM:601665","UMLS:C4054476","GARD:18935","Orphanet:77828"],"synonyms":[{"name":"genetic obesity","type":"exact"},{"name":"genetic obesity (disease)","type":"exact"},{"name":"leanness, inherited, autosomal recessive","type":"exact"},{"name":"monogenic obesity","type":"exact"},{"name":"obesity, association with, Autosomal recessive","type":"exact"},{"name":"obesity, early-onset, susceptibility to, Autosomal recessive","type":"exact"},{"name":"obesity, late-onset, Autosomal recessive","type":"exact"},{"name":"obesity, mild, early-onset, Autosomal recessive","type":"exact"},{"name":"obesity, severe, Autosomal recessive","type":"exact"},{"name":"obesity, severe, and type II diabetes, Autosomal recessive","type":"exact"},{"name":"obesity, susceptibility to, Autosomal recessive","type":"exact"}],"termid":"MONDO:0019182","terms_by_termid":{"MONDO:0010961":null},"xrefs":{"Monarch":{"xref_id":"0019182"}}}


id: PBO:0011068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, adhesion molecule (predicted)","termid":"PBO:0011068"}


id: MONDO:1010276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypogonadism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadism, non-human animal","secondary_identifiers":["OMIA:000522"],"termid":"MONDO:1010276","xrefs":{"Monarch":{"xref_id":"1010276"}}}


id: FYPO:0007367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of fructose 1,6-bisphosphate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular fructose 1,6-bisphosphate level","synonyms":[{"name":"increased cellular D-fructose 1,6-bisphosphate level","type":"exact"},{"name":"increased cellular fructose 1,6-bisphosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular fructose 1,6-bisphosphate level during vegetative growth","type":"exact"},{"name":"increased fructose 1,6-bisphosphate accumulation","type":"related"}],"termid":"FYPO:0007367"}


id: PBO:0013450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase/ flavoprotein fusion protein (predicted)","termid":"PBO:0013450"}


id: PBO:0043760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10","termid":"PBO:0043760"}


id: GO:1904245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of polynucleotide adenylyltransferase activity.","definition_xrefs":["PMID:19460348","GOC:TermGenie","GO_REF:0000059","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of polynucleotide adenylyltransferase activity (obsolete GO:1904245)","synonyms":[{"name":"regulation of AMP polynucleotidylexotransferase activity","type":"exact"},{"name":"regulation of ATP-polynucleotide adenylyltransferase activity","type":"exact"},{"name":"regulation of ATP:polynucleotide adenylyltransferase activity","type":"exact"},{"name":"regulation of ATP:polynucleotidylexotransferase activity","type":"exact"},{"name":"regulation of NTP polymerase activity","type":"exact"},{"name":"regulation of RNA adenylating enzyme activity","type":"exact"},{"name":"regulation of RNA formation factors, PF1","type":"related"},{"name":"regulation of adenosine triphosphate:ribonucleic acid adenylyltransferase activity","type":"exact"},{"name":"regulation of poly(A) hydrolase activity","type":"exact"},{"name":"regulation of poly(A) polymerase activity","type":"exact"},{"name":"regulation of poly(A) synthetase activity","type":"exact"},{"name":"regulation of poly-A polymerase activity","type":"exact"},{"name":"regulation of polyadenylate nucleotidyltransferase activity","type":"exact"},{"name":"regulation of polyadenylate polymerase activity","type":"exact"},{"name":"regulation of polyadenylate synthetase activity","type":"exact"},{"name":"regulation of polyadenylic acid polymerase activity","type":"exact"},{"name":"regulation of polyadenylic polymerase activity","type":"exact"},{"name":"regulation of terminal riboadenylate transferase activity","type":"exact"}],"termid":"GO:1904245"}


id: MONDO:0800346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction 9","secondary_identifiers":["UMLS:C3808145","MEDGEN:814475"],"synonyms":[{"name":"LVNC9","type":"exact"}],"termid":"MONDO:0800346","xrefs":{"Monarch":{"xref_id":"0800346"}}}


id: PATO:0001592
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased curvature","termid":"PATO:0001592"}


id: PBO:0035802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035802"}


id: FYPO:0005019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype observed in the vegetative growth phase of the life cycle in which the duration of septum assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal septum assembly","termid":"FYPO:0000673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal duration of septum assembly","synonyms":[{"name":"normal duration of division septum assembly","type":"exact"},{"name":"normal duration of septation","type":"broad"},{"name":"normal duration of septum assembly during mitotic cell cycle","type":"related"},{"name":"normal duration of septum assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005019"}


id: PBO:0061039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA magnesium transporter 2","termid":"PBO:0061039"}


id: PBO:0029076
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_sumoylated_protein_in_cell","termid":"PBO:0029076"}


id: GO:0009329
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric enzyme complex made up of two alpha subunits and two beta subunits. Part of the acetyl-CoA carboxylase complex. Catalyzes the transfer of a carboxyl group to form malonyl-CoA.","definition_xrefs":["PMID:8423010","PMID:2719476","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"acetyl-CoA carboxylase complex","termid":"GO:0009317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"acetate CoA-transferase complex","termid":"GO:0009329"}


id: PBO:0036331
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human COQ9","termid":"PBO:0036331"}


id: PBO:0085937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA transcribed as part of a bicistronic transcript with a predicted transcriptional repressor RGM1/YMR182C; mRNA is destroyed by nonsense-mediated decay (NMD); not an essential gene; YMR181C has a paralog, YPL229W, that arose from the whole genome duplication","termid":"PBO:0085937"}


id: RO:0002330
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"holds between two entities when some genome-level process such as gene expression is involved. This includes transcriptional, spliceosomal events. These relations can be used between either macromolecule entities (such as regions of nucleic acid) or between their abstract informational counterparts.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomically_related_to","termid":"RO:0002330"}


id: PBO:0088759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline-phosphate cytidylyltransferase Pcy1","termid":"PBO:0088759"}


id: MONDO:0032855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with dysmorphic facies and distal skeletal anomalies","secondary_identifiers":["OMIM:618659","UMLS:C5231448","GARD:18521","MEDGEN:1684792"],"synonyms":[{"name":"NEDDFSA","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES AND DISTAL SKELETAL ANOMALIES","type":"related"}],"termid":"MONDO:0032855","xrefs":{"Monarch":{"xref_id":"0032855"}}}


id: GO:0071030
data:
  {"annotated_genes":["SJAG_05243","SJAG_01331","SJAG_04500","SJAG_04768","SJAG_02382","SJAG_04025","SJAG_02622","SJAG_02879","SJAG_00456","SJAG_02005"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87816,89163,91120,92695,95339,106671,109628,110157,115939,118517],"is_not":false,"summary":null,"term":"GO:0071030"}]},"cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading incorrectly spliced pre-mRNAs within the nucleus.","definition_xrefs":["GOC:krc","PMID:18644474","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear mRNA surveillance","termid":"GO:0071028"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00456":null,"SJAG_01331":null,"SJAG_02005":null,"SJAG_02382":null,"SJAG_02622":null,"SJAG_02879":null,"SJAG_04025":null,"SJAG_04500":null,"SJAG_04768":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"nuclear mRNA surveillance of spliceosomal pre-mRNA splicing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear RNA catabolic process of incorrectly spliced pre-mRNA","type":"exact"},{"name":"nuclear mRNA quality control of incorrectly spliced pre-mRNA","type":"exact"}],"termid":"GO:0071030","terms_by_termid":{"GO:0071030":null}}


id: GO:0043928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs when the ends are not protected by the 3'-poly(A) tail.","definition_xrefs":["GOC:mtg_mpo"],"gene_count":0,"genotype_count":0,"name":"obsolete exonucleolytic catabolism of deadenylated mRNA (obsolete GO:0043928)","termid":"GO:0043928"}


id: PBO:0071816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 11","termid":"PBO:0071816"}


id: PBO:0081110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFAND2A pseudogene 1","termid":"PBO:0081110"}


id: PBO:0065526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched domain containing 1","termid":"PBO:0065526"}


id: FYPO:0005596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle is increased during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:26696398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to spindle during meiosis I","synonyms":[{"name":"increased protein localisation to spindle during meiosis I","type":"exact"},{"name":"increased protein localization to meiosis I spindle","type":"exact"},{"name":"increased protein localization to meiotic spindle during meiosis I","type":"exact"},{"name":"increased protein localization to spindle during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005596"}


id: PBO:0068229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 536","termid":"PBO:0068229"}


id: MONDO:0003401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the central nervous system and occurs during childhood.","definition_xrefs":["NCIT:C6209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"childhood endodermal sinus tumor","termid":"MONDO:0003400"},{"relation_name":"is_a","term_name":"childhood central nervous system germ cell tumor","termid":"MONDO:0003750"},{"relation_name":"is_a","term_name":"yolk sac tumor of central nervous system","termid":"MONDO:0016739"},{"relation_name":"is_a","term_name":"central nervous system nongerminomatous germ cell tumor","termid":"MONDO:0020574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"central nervous system endodermal sinus tumor","secondary_identifiers":["DOID:5343","MEDGEN:234604","UMLS:C1377613"],"synonyms":[{"name":"central nervous system endodermal sinus tumor","type":"exact"},{"name":"central nervous system yolk Sac tumor","type":"broad"},{"name":"central nervous system yolk Sac tumour","type":"broad"},{"name":"central nervous system yolk sac tumor","type":"broad"},{"name":"central nervous system yolk sac tumour","type":"broad"},{"name":"childhood central nervous system endodermal sinus neoplasm","type":"exact"},{"name":"childhood central nervous system endodermal sinus tumor","type":"exact"},{"name":"childhood central nervous system endodermal sinus tumour","type":"exact"},{"name":"childhood central nervous system yolk Sac neoplasm","type":"broad"},{"name":"childhood central nervous system yolk Sac tumor","type":"broad"},{"name":"childhood central nervous system yolk Sac tumour","type":"broad"},{"name":"paediatric central nervous system endodermal sinus neoplasm","type":"exact"},{"name":"paediatric central nervous system yolk Sac neoplasm","type":"broad"},{"name":"paediatric central nervous system yolk Sac tumour","type":"broad"},{"name":"pediatric central nervous system endodermal sinus neoplasm","type":"exact"},{"name":"pediatric central nervous system yolk Sac neoplasm","type":"broad"},{"name":"pediatric central nervous system yolk Sac tumor","type":"broad"},{"name":"yolk Sac tumor of the CNS","type":"broad"},{"name":"yolk Sac tumour of the CNS","type":"broad"}],"termid":"MONDO:0003401","xrefs":{"Monarch":{"xref_id":"0003401"}}}


id: PR:O94708
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1259.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1259.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.08","synonyms":[{"name":"Spom972h-SPCC1259.08","type":"exact"}],"termid":"PR:O94708"}


id: PBO:0053074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ladybird homeobox 1","termid":"PBO:0053074"}


id: MONDO:0100485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neurodevelopmental disorder in which the cause of the disease is a mutation in the KCNH1 gene. Variants in KCNH1 cause significant neurodevelopmental disabilities that lie along a phenotypic spectrum ranging from non-syndromic to syndromic. The most common phenotypes associated with variants in KCNH1 include intellectual disability, seizures, hypotonia, absence or hypoplasia of nails, and gingival enlargement. Hypoplastic terminal phalanges of fingers and toes, proximal placement and long thumb, and long toes present less frequently.","definition_xrefs":["PMID:25420144","PMID:25915598","PMID:33811134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"KCNH1 associated disorder","synonyms":[{"name":"KCNH1 related disorder","type":"exact"}],"termid":"MONDO:0100485","xrefs":{"Monarch":{"xref_id":"0100485"}}}


id: MONDO:0004933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoplastic left heart syndrome (HLHS) refers to the abnormal development of the left-sided cardiac structures, resulting in obstruction to blood flow from the left ventricular outflow tract. In addition, the syndrome includes underdevelopment of the left ventricle, aorta, and aortic arch, as well as mitral atresia or stenosis.","definition_xrefs":["Orphanet:2248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital left-sided heart lesions","termid":"MONDO:0005584"},{"relation_name":"is_a","term_name":"univentricular cardiopathy","termid":"MONDO:0019820"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"},{"relation_name":"is_a","term_name":"syndromic congenital heart disease","termid":"MONDO:0100614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypoplastic left heart syndrome","secondary_identifiers":["MESH:D018636","DOID:9955","UMLS:C0152101","OMIMPS:241550","ICD10CM:Q23.4","NANDO:2100071","NANDO:2200249","MEDGEN:57746","icd11.foundation:1811800027","SCTID:62067003","NANDO:1200705","NCIT:C98894","MedDRA:10021076","ICD9:746.7","GARD:6739"],"synonyms":[{"name":"HLHS","type":"exact"}],"termid":"MONDO:0004933","xrefs":{"Monarch":{"xref_id":"0004933"}}}


id: GO:0042950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of salicin (saligenin-beta-D-glucopyranoside), a glucoside of o-hydroxybenzylalcohol, from one side of a membrane to the other.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucoside transmembrane transporter activity","termid":"GO:0015573"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"salicin transmembrane transporter activity","termid":"GO:0042950"}


id: MONDO:0008264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic kidney disease that causes progressive loss of kidney function caused by mutations in the genes encoding uromodulin (UMOD), hepatocyte nuclear factor-1β (HNF1B), renin (REN), or mucin-1 (MUC1).","definition_xrefs":["PMID:25738250","GARD:0010801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"familial cystic renal disease","termid":"MONDO:0019741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005240"],"is_obsolete":false,"name":"autosomal dominant medullary cystic kidney disease with or without hyperuricemia","secondary_identifiers":["icd11.foundation:216863438","GARD:10801","MEDGEN:1377523","Orphanet:34149","MESH:C536137","SCTID:444699000","UMLS:C4511620"],"synonyms":[{"name":"ADTKD","type":"exact"},{"name":"MCKD","type":"related"},{"name":"autosomal dominant interstitial kidney disease","type":"exact"},{"name":"autosomal dominant medullary cystic kidney disease","type":"exact"},{"name":"autosomal dominant medullary cystic kidney disease with or without hyperuricemia","type":"exact"},{"name":"autosomal dominant tubulointerstitial kidney disease","type":"related"},{"name":"medullary cystic disease","type":"related"},{"name":"medullary cystic kidney disease","type":"related"},{"name":"polycystic kidneys, medullary type","type":"related"}],"termid":"MONDO:0008264","xrefs":{"Monarch":{"xref_id":"0008264"}}}


id: GO:0045462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the 3-O-acetylation of a trichothecene. Trichothecenes are sesquiterpene epoxide mycotoxins that act as potent inhibitors of eukaryotic protein synthesis.","definition_xrefs":["PMID:10583973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"trichothecene 3-O-acetyltransferase activity","termid":"GO:0045462"}


id: PBO:0003483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal lysine methyltransferase Set10","termid":"PBO:0003483"}


id: GO:0051105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA ligation, the re-formation of a broken phosphodiester bond in the DNA backbone, carried out by DNA ligase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA ligation (obsolete GO:0051105)","termid":"GO:0051105"}


id: GO:0009061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which uses compounds other than oxygen (e.g. nitrate, sulfate) as the terminal electron acceptor.","definition_xrefs":["GOC:jl","ISBN:0140513590","GOC:das"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"anaerobic respiration","secondary_identifiers":["Wikipedia:Anaerobic_respiration","Wikipedia:Cellular_respiration#Anaerobic_respiration","MetaCyc:ANAEROBIC-RESPIRATION"],"termid":"GO:0009061"}


id: MONDO:0015818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aggressive primary cutaneous B-cell lymphoma (obsolete MONDO:0015818)","secondary_identifiers":["Orphanet:178554"],"termid":"MONDO:0015818","xrefs":{"Monarch":{"xref_id":"0015818"}}}


id: MONDO:0030947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration, childhood-onset, with hypotonia, respiratory insufficiency, and brain imaging abnormalities","secondary_identifiers":["MEDGEN:1781967","Orphanet:610573","GARD:18023","OMIM:619173","UMLS:C5543020"],"synonyms":[{"name":"CONRIBA","type":"exact"},{"name":"neurodegeneration, childhood-onset, hypotonia, respiratory insufficiency and brain imaging abnormalities","type":"exact"}],"termid":"MONDO:0030947","xrefs":{"Monarch":{"xref_id":"0030947"}}}


id: GO:0044701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A response to a stimulus that involves only one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete response to stimulus by single organism (obsolete GO:0044701)","synonyms":[{"name":"response to stimulus by single organism","type":"exact"}],"termid":"GO:0044701"}


id: PBO:0030194
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_morphology_during_nitrogen_starvation","termid":"PBO:0030194"}


id: PBO:0064264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and coiled-coil domain containing D1","termid":"PBO:0064264"}


id: GO:0002065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a columnar/cuboidal epithelial cell. A columnar/cuboidal epithelial cell is a cell usually found in a two dimensional sheet with a free surface. Columnar/cuboidal epithelial cells take on the shape of a column or cube.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"}


id: GO:0045939
data:
  {"annotated_genes":["SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving steroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"negatively_regulates","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02104":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of steroid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of steroid metabolic process","type":"exact"},{"name":"down-regulation of steroid metabolic process","type":"exact"},{"name":"downregulation of steroid metabolic process","type":"exact"},{"name":"inhibition of steroid metabolic process","type":"narrow"},{"name":"negative regulation of steroid metabolism","type":"exact"}],"termid":"GO:0045939","terms_by_termid":{"GO:0010895":null}}


id: GO:1902202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatocyte growth factor receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:18819921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"hepatocyte growth factor receptor signaling pathway","termid":"GO:0048012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of hepatocyte growth factor receptor signaling pathway","synonyms":[{"name":"regulation of HGF receptor signaling pathway","type":"exact"},{"name":"regulation of HGF receptor signalling pathway","type":"exact"},{"name":"regulation of Met signaling pathway","type":"narrow"}],"termid":"GO:1902202"}


id: PBO:0039054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 3","termid":"PBO:0039054"}


id: PBO:0058925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7d","termid":"PBO:0058925"}


id: PBO:0042734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein L","termid":"PBO:0042734"}


id: MONDO:0020585
data:
  {"annotated_genes":["SJAG_05283","SJAG_04495","SJAG_04334","SJAG_04192","SJAG_00839","SJAG_00605","SJAG_02297","SJAG_02009","SJAG_02796"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[85795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[86013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[87400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009113"},{"annotations":[86516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[86799,86798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[85934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[86125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","definition":"Any form of anemia that results from the absence of, or the defective action of, any enzyme involved in erythropoiesis.","definition_xrefs":["NCIT:C131630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia due to enzyme disorder","termid":"MONDO:0020584"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00605":null,"SJAG_00839":null,"SJAG_02009":null,"SJAG_02297":null,"SJAG_02796":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"anemia due to erythrocyte enzyme disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1383362","UMLS:C4329304"],"synonyms":[{"name":"anemia due to erythrocyte enzyme disorder","type":"exact"}],"termid":"MONDO:0020585","terms_by_termid":{"MONDO:0009113":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009902":null,"MONDO:0009950":null,"MONDO:0010480":null,"MONDO:0013275":null,"MONDO:0014221":null},"xrefs":{"Monarch":{"xref_id":"0020585"}}}


id: MONDO:0000780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Prunus armeniaca.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete apricot allergy (obsolete MONDO:0000780)","secondary_identifiers":["DOID:0060505"],"synonyms":[{"name":"Prunus armeniaca allergic disease","type":"exact"},{"name":"Prunus armeniaca caused allergic disease","type":"exact"},{"name":"Prunus armeniaca fruit allergy","type":"exact"},{"name":"allergy of Prunus armeniaca","type":"exact"}],"termid":"MONDO:0000780","xrefs":{"Monarch":{"xref_id":"0000780"}}}


id: GO:0032586
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a protein storage vacuole.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type vacuole membrane","termid":"GO:0009705"},{"relation_name":"part_of","term_name":"protein storage vacuole","termid":"GO:0000326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"protein storage vacuole membrane","termid":"GO:0032586"}


id: MONDO:0030797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the CC2D2A gene.","definition_xrefs":["PMID:30267408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 93","secondary_identifiers":["MEDGEN:1810905","OMIM:619845","UMLS:C5676970"],"synonyms":[{"name":"CC2D2A retinitis pigmentosa 93","type":"exact"},{"name":"RP93","type":"exact"},{"name":"retinitis pigmentosa 93","type":"exact"}],"termid":"MONDO:0030797","xrefs":{"Monarch":{"xref_id":"0030797"}}}


id: PBO:0029626
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_sister_chromatid_cohesion","termid":"PBO:0029626"}


id: FYPO:0006083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which asci that contain four spores form following conjugation and subsequent sporulation, but sporulation is not entirely normal.","definition_xrefs":["PomBase:mah","PMID:28011631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000121","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with four spores","synonyms":[{"name":"ascospore formation resulting in formation of asci with four spores","type":"exact"},{"name":"normal spore number","type":"exact"},{"name":"sporulation resulting in formation of asci with four spores","type":"exact"}],"termid":"FYPO:0006083"}


id: GO:0050212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + O2 + progesterone = 11alpha-hydroxyprogesterone + A + H2O.","definition_xrefs":["RHEA:18205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progesterone monooxygenase activity","termid":"GO:0050214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"progesterone 11-alpha-monooxygenase activity","secondary_identifiers":["MetaCyc:PROGESTERONE-11-ALPHA-MONOOXYGENASE-RXN","PMID:39766209","EC:1.14.99.14","KEGG_REACTION:R02214"],"synonyms":[{"name":"progesterone 11-alpha-hydroxylase activity","type":"related"},{"name":"progesterone 11a-monooxygenase activity","type":"exact"},{"name":"progesterone 11alpha-hydroxylase activity","type":"related"},{"name":"progesterone 11alpha-monooxygenase activity","type":"related"},{"name":"progesterone,hydrogen-donor:oxygen oxidoreductase (11alpha-hydroxylating)","type":"related"}],"termid":"GO:0050212"}


id: GO:0072295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the distal tubule of the metanephric nephron acquires its identity.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of distal tubule identity","termid":"GO:0072084"},{"relation_name":"is_a","term_name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"},{"relation_name":"part_of","term_name":"metanephric distal tubule morphogenesis","termid":"GO:0072287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric distal tubule identity","termid":"GO:0072295"}


id: MONDO:0006839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by a combination of ostium secundum atrial septal defect and an acquired mitral valve stenosis.","definition_xrefs":["MESH:D008185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Lutembacher syndrome","secondary_identifiers":["UMLS:C0024164","MEDGEN:9825","DOID:1998","SCTID:204319006"],"synonyms":[{"name":"Lutembacher syndrome","type":"exact"},{"name":"Lutembacher's anomaly","type":"exact"},{"name":"Lutembacher's syndrome","type":"exact"},{"name":"Lutembachers syndrome","type":"related"},{"name":"syndrome, Lutembacher","type":"related"},{"name":"syndrome, Lutembacher's","type":"related"}],"termid":"MONDO:0006839","xrefs":{"Monarch":{"xref_id":"0006839"}}}


id: FYPO:0006829
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to zinc ion starvation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal RNA level during cellular response to zinc ion starvation","synonyms":[{"name":"normal RNA accumulation during cellular response to zinc ion starvation","type":"related"},{"name":"normal RNA level during cellular response to zinc ion starvation during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to zinc ion starvation during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to zinc starvation","type":"exact"},{"name":"normal RNA level during zinc ion starvation","type":"exact"},{"name":"normal RNA level in response to zinc ion starvation","type":"exact"},{"name":"normal mRNA level during cellular response to zinc ion starvation","type":"narrow"},{"name":"normal transcript level during cellular response to zinc ion starvation","type":"exact"}],"termid":"FYPO:0006829"}


id: MONDO:0008284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyposis","termid":"MONDO:0000147"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyposis of gastric fundus without polyposis coli","secondary_identifiers":["MESH:C566775","MEDGEN:357403","OMIM:175505","UMLS:C1868001"],"synonyms":[{"name":"fundic gland polyposis","type":"related"},{"name":"polyposis of gastric fundus without polyposis coli","type":"exact"}],"termid":"MONDO:0008284","xrefs":{"Monarch":{"xref_id":"0008284"}}}


id: PR:Q09674
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5H10.01 gene.","definition_xrefs":["UniProtKB:Q09674","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0317 protein C5H10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.01","synonyms":[{"name":"Spom972h-SPAC5H10.01","type":"exact"}],"termid":"PR:Q09674"}


id: MONDO:0957111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological muscular channelopathy due to a genetic sodium channel defect","secondary_identifiers":["Orphanet:98738","MEDGEN:1842444","UMLS:C5681681","GARD:19563"],"termid":"MONDO:0957111","xrefs":{"Monarch":{"xref_id":"0957111"}}}


id: PBO:0027067
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_metabolic_process","termid":"PBO:0027067"}


id: SO:0001566
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within a regulatory region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_variant","termid":"SO:0001878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"Jannovar:regulatory_region_variant","type":"exact"},{"name":"VEP:regulatory_region_variant","type":"exact"},{"name":"regulatory region variant","type":"exact"},{"name":"regulatory_region_","type":"exact"},{"name":"snpEff:REGULATION","type":"exact"}],"termid":"SO:0001566"}


id: PATO:0002494
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed distally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal orientation","synonyms":[{"name":"distally directed","type":"exact"}],"termid":"PATO:0002494"}


id: GO:0047205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: feruloyl-CoA + quinate = O-feruloylquinate + CoA.","definition_xrefs":["MetaCyc:2.3.1.99-RXN","EC:2.3.1.99"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"quinate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["RHEA:15021"],"synonyms":[{"name":"feruloyl-CoA:quinate O-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"hydroxycinnamoyl coenzyme A-quinate transferase activity","type":"related"}],"termid":"GO:0047205"}


id: GO:0015568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-idonate from one side of a membrane to the other. L-idonate is an aldonic acid derived from L-idose, an aldohexose which is epimeric with D-glucose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"aldonate transmembrane transporter activity","termid":"GO:0042879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-idonate transmembrane transporter activity","synonyms":[{"name":"L-idonate/D-gluconate:hydrogen symporter activity","type":"narrow"}],"termid":"GO:0015568"}


id: PBO:0049654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 8","termid":"PBO:0049654"}


id: PBO:0000250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related kinase family","termid":"PBO:0000250"}


id: SO:0001436
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codons GTN (GTT, GTC, GTA and GTG).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valine","synonyms":[{"name":"V","type":"exact"},{"name":"Val","type":"exact"}],"termid":"SO:0001436"}


id: PBO:0076960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transforming growth factor beta receptor 3","termid":"PBO:0076960"}


id: GO:0052831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol-1,3,4,6-tetrakisphosphate + H2O = inositol-3,4,6-trisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"inositol-1,3,4,6-tetrakisphosphate 1-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1855159"],"termid":"GO:0052831"}


id: GO:0006352
data:
  {"annotated_genes":["SJAG_01111","SJAG_04097","SJAG_00045","SJAG_02447","SJAG_01403","SJAG_03694","SJAG_01712","SJAG_03285","SJAG_04758","SJAG_02314","SJAG_00349","SJAG_01804","SJAG_00650","SJAG_02385","SJAG_00540","SJAG_03431","SJAG_02329","SJAG_00584","SJAG_05203","SJAG_01744","SJAG_03206","SJAG_02541","SJAG_04755","SJAG_01207","SJAG_00641","SJAG_03120","SJAG_03884","SJAG_02906","SJAG_03599","SJAG_05331","SJAG_04420","SJAG_04194","SJAG_02927","SJAG_03007","SJAG_02391","SJAG_02458","SJAG_02466","SJAG_01562","SJAG_01465","SJAG_01653","SJAG_00873","SJAG_00512","SJAG_03573","SJAG_02551","SJAG_01475","SJAG_00159","SJAG_05339","SJAG_04596","SJAG_00741","SJAG_04917","SJAG_03014","SJAG_03354","SJAG_00735","SJAG_02254","SJAG_00441","SJAG_04005","SJAG_02846","SJAG_00904","SJAG_05341","SJAG_00692","SJAG_02571","SJAG_05020","SJAG_02170","SJAG_02813","SJAG_02747","SJAG_00119","SJAG_03944","SJAG_04368","SJAG_00095","SJAG_00087","SJAG_03255","SJAG_03752","SJAG_04654","SJAG_01808","SJAG_03107","SJAG_04989","SJAG_00746","SJAG_00184","SJAG_02549","SJAG_04613","SJAG_01513","SJAG_02872","SJAG_00872","SJAG_00739","SJAG_00581","SJAG_02768","SJAG_03590","SJAG_03421","SJAG_01622","SJAG_00868","SJAG_02589","SJAG_04977","SJAG_02600","SJAG_00150","SJAG_03668","SJAG_00769","SJAG_02815","SJAG_03758","SJAG_00634","SJAG_04820","SJAG_00342","SJAG_05192","SJAG_00896","SJAG_02869","SJAG_02849","SJAG_04205","SJAG_03576","SJAG_01765","SJAG_00766","SJAG_01611","SJAG_04705","SJAG_04576","SJAG_03441","SJAG_00116","SJAG_04030","SJAG_03618","SJAG_00067","SJAG_04894","SJAG_04274","SJAG_00202","SJAG_01436","SJAG_03211","SJAG_02981","SJAG_02500","SJAG_00995","SJAG_00901","SJAG_01523","SJAG_00585","SJAG_02066","SJAG_03622","SJAG_03366","SJAG_00440","SJAG_02773","SJAG_01016","SJAG_01658","SJAG_01713","SJAG_04099","SJAG_04614","SJAG_03289","SJAG_01110","SJAG_07011","SJAG_04038","SJAG_03095","SJAG_02691","SJAG_00458","SJAG_03033","SJAG_03579","SJAG_04647","SJAG_02494","SJAG_01711","SJAG_00421","SJAG_01771","SJAG_02798","SJAG_03145","SJAG_01827","SJAG_03956","SJAG_05313","SJAG_00909","SJAG_03787","SJAG_00758","SJAG_03900","SJAG_03776","SJAG_03035","SJAG_03839","SJAG_00297","SJAG_00743","SJAG_02174","SJAG_01325","SJAG_02101","SJAG_04852","SJAG_04213","SJAG_02303","SJAG_01230","SJAG_01952","SJAG_04766","SJAG_01710"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79906,90034],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045899"},{"annotations":[99005,103757,106408,91005,96195,99357,102296,87774,90691,94783,106051,104016,109117,106598,109090,115683,119334,95715,115118,94668,106735],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0060261"},{"annotations":[68893,77866,64238],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001188"},{"annotations":[70894,75297,75966,71737,74050,72320,74845,94474,71090,77201,77602,67633],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051123"},{"annotations":[72184,103411],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070898"},{"annotations":[98507,87738,95473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006391"},{"annotations":[95911,71794,110151,93504,79508,110108,72709,108048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006361"},{"annotations":[73150,94426,80741,105820,113350,90214,76548,103496,100562,115214,108850,95912,92365,67991,97142,71248,70519,105861,92504,108254,103957,114615,57562,79309,80663,70706,79487,112464,94240,115528,108062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006367"},{"annotations":[95913,74132,88507,71509,80150,89244,107290,115752,57008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006384"},{"annotations":[91739,107807,96225,106128,109435,115397,88663,92625,96218,105381,94637,117663,117936,117958,90915,96783,113703,98152,88479,101314,112129,115642,88302,113513,113533,117294,91021,94484,108243,94340,110984,98998,116736,109716,116094,116927,103461,89200,93123,95808,90121,114784,96982,103708,117843,93841,97417,107267,108044,114693,94975,103123,98566,114608,105980,88123,105389,112936,104190,114619,99474,107693,89607,110847,94540,91035,101903,116675,118360,87979,94464,88814,107115,118007,89434,109947,109839,108830,99724,94450,115788,94109,113359,115774,115104,94512,90390,98832,104916,95783],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045815"},{"annotations":[77600],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001174"}]},"cv_name":"biological_process","definition":"The initial step of transcription, consisting of the assembly of the RNA polymerase preinitiation complex (PIC) at a gene promoter, as well as the formation of the first few bonds of the RNA transcript. Transcription initiation includes abortive initiation events, which occur when the first few nucleotides are repeatedly synthesized and then released, and ends when promoter clearance takes place.","definition_xrefs":["PMID:18280161","GOC:jid","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":176,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00067":null,"SJAG_00087":null,"SJAG_00095":null,"SJAG_00116":null,"SJAG_00119":null,"SJAG_00150":null,"SJAG_00159":null,"SJAG_00184":null,"SJAG_00202":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00349":null,"SJAG_00421":null,"SJAG_00440":null,"SJAG_00441":null,"SJAG_00458":null,"SJAG_00512":null,"SJAG_00540":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00585":null,"SJAG_00634":null,"SJAG_00641":null,"SJAG_00650":null,"SJAG_00692":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00741":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00758":null,"SJAG_00766":null,"SJAG_00769":null,"SJAG_00868":null,"SJAG_00872":null,"SJAG_00873":null,"SJAG_00896":null,"SJAG_00901":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_00995":null,"SJAG_01016":null,"SJAG_01110":null,"SJAG_01111":null,"SJAG_01207":null,"SJAG_01230":null,"SJAG_01325":null,"SJAG_01403":null,"SJAG_01436":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01513":null,"SJAG_01523":null,"SJAG_01562":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01653":null,"SJAG_01658":null,"SJAG_01710":null,"SJAG_01711":null,"SJAG_01712":null,"SJAG_01713":null,"SJAG_01744":null,"SJAG_01765":null,"SJAG_01771":null,"SJAG_01804":null,"SJAG_01808":null,"SJAG_01827":null,"SJAG_01952":null,"SJAG_02066":null,"SJAG_02101":null,"SJAG_02170":null,"SJAG_02174":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02314":null,"SJAG_02329":null,"SJAG_02385":null,"SJAG_02391":null,"SJAG_02447":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02494":null,"SJAG_02500":null,"SJAG_02541":null,"SJAG_02549":null,"SJAG_02551":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02600":null,"SJAG_02691":null,"SJAG_02747":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02798":null,"SJAG_02813":null,"SJAG_02815":null,"SJAG_02846":null,"SJAG_02849":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_02927":null,"SJAG_02981":null,"SJAG_03007":null,"SJAG_03014":null,"SJAG_03033":null,"SJAG_03035":null,"SJAG_03095":null,"SJAG_03107":null,"SJAG_03120":null,"SJAG_03145":null,"SJAG_03206":null,"SJAG_03211":null,"SJAG_03255":null,"SJAG_03285":null,"SJAG_03289":null,"SJAG_03354":null,"SJAG_03366":null,"SJAG_03421":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03573":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03590":null,"SJAG_03599":null,"SJAG_03618":null,"SJAG_03622":null,"SJAG_03668":null,"SJAG_03694":null,"SJAG_03752":null,"SJAG_03758":null,"SJAG_03776":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03884":null,"SJAG_03900":null,"SJAG_03944":null,"SJAG_03956":null,"SJAG_04005":null,"SJAG_04030":null,"SJAG_04038":null,"SJAG_04097":null,"SJAG_04099":null,"SJAG_04194":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04274":null,"SJAG_04368":null,"SJAG_04420":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04613":null,"SJAG_04614":null,"SJAG_04647":null,"SJAG_04654":null,"SJAG_04705":null,"SJAG_04755":null,"SJAG_04758":null,"SJAG_04766":null,"SJAG_04820":null,"SJAG_04852":null,"SJAG_04894":null,"SJAG_04917":null,"SJAG_04977":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05203":null,"SJAG_05313":null,"SJAG_05331":null,"SJAG_05339":null,"SJAG_05341":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"DNA-templated transcription initiation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0001123"],"synonyms":[{"name":"DNA-dependent RNA polymerase complex assembly at promoter","type":"exact"},{"name":"DNA-dependent transcription, initiation","type":"exact"},{"name":"DNA-templated transcription, initiation","type":"exact"},{"name":"initiation of DNA-dependent transcription","type":"exact"},{"name":"initiation of transcription, DNA-dependent","type":"exact"},{"name":"transcription initiation factor activity","type":"related"},{"name":"transcription initiation from bacterial-type RNA polymerase promoter","type":"narrow"},{"name":"transcription initiation, DNA-dependent","type":"related"}],"termid":"GO:0006352","terms_by_termid":{"GO:0001174":null,"GO:0001188":null,"GO:0006361":null,"GO:0006367":null,"GO:0006384":null,"GO:0006391":null,"GO:0045815":null,"GO:0045899":null,"GO:0051123":null,"GO:0060261":null,"GO:0070898":null}}


id: GO:1902018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cilium assembly.","definition_xrefs":["GOC:TermGenie","GOC:dph","GOC:cilia","PMID:17719545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"is_a","term_name":"regulation of cilium assembly","termid":"GO:1902017"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"negatively_regulates","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of cilium assembly","synonyms":[{"name":"down regulation of ciliogenesis","type":"exact"},{"name":"down regulation of cilium assembly","type":"exact"},{"name":"down regulation of cilium biogenesis","type":"related"},{"name":"down-regulation of ciliogenesis","type":"exact"},{"name":"down-regulation of cilium assembly","type":"exact"},{"name":"down-regulation of cilium biogenesis","type":"related"},{"name":"downregulation of ciliogenesis","type":"exact"},{"name":"downregulation of cilium assembly","type":"exact"},{"name":"downregulation of cilium biogenesis","type":"related"},{"name":"inhibition of ciliogenesis","type":"exact"},{"name":"inhibition of cilium assembly","type":"narrow"},{"name":"inhibition of cilium biogenesis","type":"related"},{"name":"negative regulation of ciliogenesis","type":"exact"},{"name":"negative regulation of cilium biogenesis","type":"related"}],"termid":"GO:1902018"}


id: PBO:0028052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_morphology","termid":"PBO:0028052"}


id: GO:0032922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gene expression such that an expression pattern recurs with a regularity of approximately 24 hours.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"},{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"circadian regulation of gene expression","synonyms":[{"name":"circadian regulation of protein expression","type":"related"},{"name":"diurnal variation of gene expression","type":"related"},{"name":"diurnal variation of protein expression","type":"related"}],"termid":"GO:0032922"}


id: PBO:0081883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 831","termid":"PBO:0081883"}


id: MONDO:0009767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocerebral hypopigmentation syndrome, Cross type is a rare congenital syndrome characterized by cutaneous and ocular hypopigmentation, various ocular anomalies (e.g. corneal and lens opacity, spastic ectropium, and/or nystagmus), growth deficiency, intellectual deficit and other progressive neurologic anomalies such as spastic tetraplegia, hyperreflexia, and/or athetoid movements. The clinical picture varies among patients and may also include other anomalies such as urinary tract abnormalities, Dandy-Walker malformations, and/or bilateral inguinal hernia.","definition_xrefs":["Orphanet:2719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic oculocutaneous albinism","termid":"MONDO:0017305"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"oculocerebral hypopigmentation syndrome, Cross type","secondary_identifiers":["ICD10CM:E70.3","ICD9:759.89","MEDGEN:423639","OMIM:257800","SCTID:17827007","UMLS:C2936910","GARD:105"],"synonyms":[{"name":"Cross syndrome","type":"exact"},{"name":"Kramer syndrome","type":"related"},{"name":"Oculocerebral Syndrome with Hypopigmentation","type":"exact"},{"name":"hypopigmentation oculocerebral syndrome Cross type","type":"related"},{"name":"oculocerebral hypopigmentation syndrome","type":"related"},{"name":"oculocerebral syndrome with hypopigmentation","type":"related"}],"termid":"MONDO:0009767","xrefs":{"Monarch":{"xref_id":"0009767"}}}


id: MONDO:0013406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any age-related macular degeneration in which the cause of the disease is a mutation in the RAX2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"age related macular degeneration 6","secondary_identifiers":["UMLS:C3151060","DOID:0110018","MESH:C563674","OMIM:613757","MEDGEN:462410"],"synonyms":[{"name":"ARMD6","type":"exact"},{"name":"RAX2 age-related macular degeneration","type":"exact"},{"name":"age related macular degeneration type 6","type":"exact"},{"name":"age-related macular degeneration caused by mutation in RAX2","type":"exact"},{"name":"macular Degeneration, age-related, type 6","type":"exact"},{"name":"macular degeneration, age-related, 6","type":"related"}],"termid":"MONDO:0013406","xrefs":{"Monarch":{"xref_id":"0013406"}}}


id: PATO:0001944
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow and orange hue.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orange","termid":"PATO:0000953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow orange","termid":"PATO:0001944"}


id: PBO:0050599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxy-delta-5-steroid dehydrogenase, 3 beta, pseudogene 4","termid":"PBO:0050599"}


id: MONDO:0001503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular hypotension","termid":"MONDO:0004390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"primary eye hypotony","secondary_identifiers":["DOID:12349","UMLS:C0154782","MEDGEN:509656","SCTID:2251002","ICD9:360.31"],"synonyms":[{"name":"primary hypotony of eye","type":"exact"}],"termid":"MONDO:0001503","xrefs":{"Monarch":{"xref_id":"0001503"}}}


id: PR:Q06975
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An H/ACA ribonucleoprotein complex subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03642","PANTHER:PTHR23237:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H/ACA ribonucleoprotein complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC20F10.01","secondary_identifiers":["UniProtKB:Q06975"],"synonyms":[{"name":"Spom972h-GAR1","type":"exact"},{"name":"snoRNP protein GAR1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q06975"}


id: MONDO:0001268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A loss of gum tissue resulting in an exposure of the roots of the teeth.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingival disorder","termid":"MONDO:0002021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gingival recession","secondary_identifiers":["ICD9:523.20","ICD9:523.22","DOID:1134","SCTID:59898000","icd11.foundation:1059404242","ICD9:523.24","MEDGEN:6607","MESH:D005889","ICD10CM:K06.0","ICD9:523.2","ICD9:523.21","ICD9:523.23","UMLS:C0017572"],"synonyms":[{"name":"gingival recession","type":"exact"},{"name":"gingival recession, localised","type":"exact"},{"name":"gingival recession, localized","type":"exact"},{"name":"gingival recession, unspecified","type":"exact"},{"name":"localised gingival recession","type":"exact"},{"name":"localized gingival recession","type":"exact"},{"name":"minimal gingival recession","type":"exact"},{"name":"moderate gingival recession","type":"exact"},{"name":"severe gingival recession","type":"exact"}],"termid":"MONDO:0001268","xrefs":{"Monarch":{"xref_id":"0001268"}}}


id: PBO:0070103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 17 pseudogene","termid":"PBO:0070103"}


id: MONDO:0012462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive frontotemporal pachygyria","secondary_identifiers":["Orphanet:329329","MEDGEN:343995","GARD:21489","MESH:C538092","OMIM:610279","UMLS:C1853215"],"synonyms":[{"name":"pachygyria, frontotemporal","type":"related"}],"termid":"MONDO:0012462","xrefs":{"Monarch":{"xref_id":"0012462"}}}


id: MONDO:0060532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital heart defects and skeletal malformations syndrome","secondary_identifiers":["OMIM:617602","Orphanet:643503","MEDGEN:1618340","UMLS:C4539857"],"synonyms":[{"name":"CHDSKM","type":"related"},{"name":"congenital heart defects and skeletal malformations syndrome","type":"exact"},{"name":"marfanoid habitus-facial dysmorphism-skeletal abnormality-heart defect syndrome","type":"exact"}],"termid":"MONDO:0060532","xrefs":{"Monarch":{"xref_id":"0060532"}}}


id: GO:1990684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A macromolecular complex containing separate protein, lipid and RNA molecules. Separate in this context means not covalently bound to each other.","definition_xrefs":["PMID:23559634","PMID:21423178","GOC:vesicles","PMID:22028337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein-lipid-RNA complex","synonyms":[{"name":"miRNA-lipoprotein complex","type":"related"}],"termid":"GO:1990684"}


id: PBO:0063464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor receptor beta","termid":"PBO:0063464"}


id: PATO:0000078
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's movement or variation characterized by the regular recurrence or alternation of different quantities or conditions.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal distribution quality","termid":"PATO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhythm quality","termid":"PATO:0000078"}


id: FYECO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which vanoxerine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ vanoxerine","termid":"FYECO:0000347"}


id: RO:0003302
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity has some causal or contributing role that influences the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causes_or_contributes_to_condition","termid":"RO:0003302"}


id: PBO:0052783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 20","termid":"PBO:0052783"}


id: PR:000037032
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A structural maintenance of chromosomes protein 3 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm3/Smc3 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC10F6.09c","synonyms":[{"name":"Spom-psm3","type":"exact"},{"name":"cohesin complex Psm3 subunit (Schizosaccharomyces pombe)","type":"exact"},{"name":"structural maintenance of chromosomes protein 3 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000037032"}


id: PR:O94309
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- git11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.04","synonyms":[{"name":"Spom972h-git11","type":"exact"}],"termid":"PR:O94309"}


id: MONDO:0019877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 2q is a rare chromosomal anomaly, resulting from the partial duplication of the long arm of chromosome 2, characterized by moderate psychomotor delay, mild intellectual disability, facial dysmorphism (high hairline, prominent forehead, hypertelorism, upslanting palpebral fissures, large, low-set and/or posteriorly rotated ears, depressed/broad nasal bridge, prominent nasal tip, thin upper lip vermillion), clino-/camptodactyly and normal or increased body measurements. On occasion genital anomalies (hypospadias, cryptorchidism, shawl scrotum) and short stature may be observed.","definition_xrefs":["Orphanet:96094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 2","termid":"MONDO:0016953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 2q","secondary_identifiers":["SCTID:763272003","GARD:19310","MEDGEN:1634043","UMLS:C4706361"],"synonyms":[{"name":"distal duplication 2q","type":"exact"},{"name":"distal trisomy type 2q","type":"exact"},{"name":"telomeric duplication 2q","type":"exact"},{"name":"trisomy 2qter","type":"exact"}],"termid":"MONDO:0019877","xrefs":{"Monarch":{"xref_id":"0019877"}}}


id: GO:0106094
data:
  {"annotated_genes":["SJAG_01538","SJAG_05196","SJAG_04558"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034993"},{"annotations":[97045,103158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A nuclear membrane protein complex which connects the nuclear outer and inner membranes together, and links thereby links the nuclear lumen to cytoplasmic microtubules.","definition_xrefs":["GOC:vw","PMID:19225124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane protein complex","termid":"GO:0106083"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"nuclear membrane microtubule tethering complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106094","terms_by_termid":{"GO:0034993":null,"GO:1990612":null}}


id: GO:0006084
data:
  {"annotated_genes":["SJAG_02741","SJAG_02158","SJAG_02769","SJAG_04865","SJAG_04499","SJAG_01402","SJAG_03310","SJAG_03290","SJAG_01139","SJAG_03731","SJAG_01474","SJAG_03349","SJAG_00947","SJAG_00866","SJAG_01187","SJAG_03715","SJAG_02380","SJAG_03064","SJAG_01989","SJAG_02006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80284,114732,116150],"is_not":false,"summary":null,"term":"GO:0006084"},{"annotations":[98703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[91766,68906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[117441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[80488,115291,74689,77468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[111749,115870],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2001211"},{"annotations":[73753,87747,88175,73123,79394,74983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[75467],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated; it is a metabolite derived from several pathways (e.g. glycolysis, fatty acid oxidation, amino-acid catabolism) and is further metabolized by the tricarboxylic acid cycle. It is a key intermediate in lipid and terpenoid biosynthesis.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00866":null,"SJAG_00947":null,"SJAG_01139":null,"SJAG_01187":null,"SJAG_01402":null,"SJAG_01474":null,"SJAG_01989":null,"SJAG_02006":null,"SJAG_02158":null,"SJAG_02380":null,"SJAG_02741":null,"SJAG_02769":null,"SJAG_03064":null,"SJAG_03290":null,"SJAG_03310":null,"SJAG_03349":null,"SJAG_03715":null,"SJAG_03731":null,"SJAG_04499":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"acetyl-CoA metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"acetyl coenzyme A metabolic process","type":"exact"},{"name":"acetyl coenzyme A metabolism","type":"exact"},{"name":"acetyl-CoA metabolism","type":"exact"}],"termid":"GO:0006084","terms_by_termid":{"GO:0006084":null,"GO:0006085":null,"GO:0006086":null,"GO:0010510":null,"GO:0019287":null,"GO:0019427":null,"GO:1990181":null,"GO:2001211":null}}


id: PBO:0076881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 30","termid":"PBO:0076881"}


id: GO:0021731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the trigeminal motor nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:cls","GOC:curators","GOC:dph","GOC:dgh","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal motor nucleus development","termid":"GO:0021731"}


id: PBO:0026767
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_catalase_activity","termid":"PBO:0026767"}


id: MONDO:0004704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal disease (obsolete MONDO:0004704)","termid":"MONDO:0004704","xrefs":{"Monarch":{"xref_id":"0004704"}}}


id: PBO:0083667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum packaging chaperone; required for incorporation of amino acid permeases into COPII coated vesicles for transport to the cell surface","termid":"PBO:0083667"}


id: GO:0000215
data:
  {"annotated_genes":["SJAG_03913"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74159],"is_not":false,"summary":null,"term":"GO:0000215"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-phospho-[ligated tRNA] + NAD+ = mature tRNA + ADP ribose 1'',2''-phosphate + nicotinamide + H2O. This reaction is the transfer of the splice junction 2-phosphate from ligated tRNA to NAD+ to produce ADP-ribose 1'-2' cyclic phosphate.","definition_xrefs":["EC:2.7.1.160","PMID:9148937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0003824","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"tRNA 2'-phosphotransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0008665","RHEA:23324","MetaCyc:2.7.1.160-RXN"],"synonyms":[{"name":"2'-phospho-[ligated tRNA]:NAD+ phosphotransferase activity","type":"related"},{"name":"2'-phospho-tRNA:NAD+ phosphotransferase activity","type":"related"},{"name":"2'-phosphotransferase activity","type":"broad"},{"name":"Tpt1","type":"related"},{"name":"Tpt1p","type":"related"},{"name":"yeast 2'-phosphotransferase activity","type":"narrow"}],"termid":"GO:0000215","terms_by_termid":{"GO:0000215":null}}


id: PBO:0047611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin homology 2 domain containing 3","termid":"PBO:0047611"}


id: PR:Q9C0W8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- drp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0W8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein tip20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC691.02c","synonyms":[{"name":"Spom972h-drp1","type":"exact"}],"termid":"PR:Q9C0W8"}


id: MONDO:0001603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lagophthalmos","termid":"MONDO:0001604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"paralytic lagophthalmos","secondary_identifiers":["MEDGEN:509844","icd11.foundation:2122617367","ICD9:374.21","UMLS:C0155197","DOID:12958","HP:0030003"],"synonyms":[{"name":"paralytic lagophthalmos","type":"exact"},{"name":"paralytic lagophthalmos (disease)","type":"exact"}],"termid":"MONDO:0001603","xrefs":{"Monarch":{"xref_id":"0001603"}}}


id: GO:0043023
data:
  {"annotated_genes":["SJAG_03012","SJAG_00188","SJAG_01074","SJAG_03232","SJAG_01176","SJAG_04874","SJAG_03882"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62010,71704,73980,76956,76984,79608,88704],"is_not":false,"summary":null,"term":"GO:0043023"}]},"cv_name":"molecular_function","definition":"Binding to a large ribosomal subunit.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome binding","termid":"GO:0043022"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_01074":null,"SJAG_01176":null,"SJAG_03012":null,"SJAG_03232":null,"SJAG_03882":null,"SJAG_04874":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ribosomal large subunit binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0043023","terms_by_termid":{"GO:0043023":null}}


id: PBO:0065300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 4","termid":"PBO:0065300"}


id: PBO:0051258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-44 (pseudogene)","termid":"PBO:0051258"}


id: FYPO:0002930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which polyadenylated RNA molecules have poly(A) tails of that are shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal poly(A) tail length","termid":"FYPO:0002929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002929"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002929","FYPO:0001985"],"is_obsolete":false,"name":"decreased poly(A) tail length","synonyms":[{"name":"decreased polyA sequence length","type":"exact"},{"name":"decreased polyA tail length","type":"exact"},{"name":"reduced poly(A) tail length","type":"exact"},{"name":"short poly(a) tails","type":"exact"}],"termid":"FYPO:0002930"}


id: MONDO:0009056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutis verticis gyrata and intellectual disability","secondary_identifiers":["Orphanet:1557","MEDGEN:387821","OMIM:219300","UMLS:C1857444"],"synonyms":[{"name":"CVG/MR","type":"related"},{"name":"cutis verticis gyrata and intellectual disability","type":"exact"},{"name":"cutis verticis gyrata and mental retardation","type":"exact"},{"name":"cutis verticis gyrata-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0009056","xrefs":{"Monarch":{"xref_id":"0009056"}}}


id: PBO:0078098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 6A","termid":"PBO:0078098"}


id: MONDO:1010754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary sparse hair and dental aplasia in dogs associated with a variation in the EDA gene.","definition_xrefs":["OMIA:000543-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"},{"relation_name":"is_a","term_name":"hypohidrotic ectodermal dysplasia, non-human animal","termid":"MONDO:1012576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked hypohidrotic ectodermal dysplasia, EDA-related, dog","termid":"MONDO:1010754","xrefs":{"Monarch":{"xref_id":"1010754"}}}


id: GO:1904522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myofibroblast cell apoptotic process.","definition_xrefs":["GOC:TermGenie","PMID:26119034","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of myofibroblast cell apoptotic process","termid":"GO:1904520"},{"relation_name":"positively_regulates","term_name":"myofibroblast cell apoptotic process","termid":"GO:1904516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myofibroblast cell apoptotic process","synonyms":[{"name":"activation of MFB apoptosis","type":"narrow"},{"name":"activation of MFB apoptotic process","type":"narrow"},{"name":"activation of myofibroblast cell apoptosis","type":"narrow"},{"name":"activation of myofibroblast cell apoptotic process","type":"narrow"},{"name":"positive regulation of MFB apoptosis","type":"narrow"},{"name":"positive regulation of MFB apoptotic process","type":"exact"},{"name":"positive regulation of myofibroblast cell apoptosis","type":"narrow"},{"name":"up regulation of MFB apoptosis","type":"narrow"},{"name":"up regulation of MFB apoptotic process","type":"exact"},{"name":"up regulation of myofibroblast cell apoptosis","type":"narrow"},{"name":"up regulation of myofibroblast cell apoptotic process","type":"exact"},{"name":"up-regulation of MFB apoptosis","type":"narrow"},{"name":"up-regulation of MFB apoptotic process","type":"exact"},{"name":"up-regulation of myofibroblast cell apoptosis","type":"narrow"},{"name":"up-regulation of myofibroblast cell apoptotic process","type":"exact"},{"name":"upregulation of MFB apoptosis","type":"narrow"},{"name":"upregulation of MFB apoptotic process","type":"exact"},{"name":"upregulation of myofibroblast cell apoptosis","type":"narrow"},{"name":"upregulation of myofibroblast cell apoptotic process","type":"exact"}],"termid":"GO:1904522"}


id: PBO:0045440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-19 like 4","termid":"PBO:0045440"}


id: GO:0047869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S,S-dimethyl-beta-propiothetin = acrylate + dimethyl sulfide + H+.","definition_xrefs":["EC:4.4.1.3","RHEA:19965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dimethylpropiothetin dethiomethylase activity","secondary_identifiers":["KEGG_REACTION:R02574","MetaCyc:DIMETHYLPROPIOTHETIN-DETHIOMETHYLASE-RXN"],"synonyms":[{"name":"S,S-dimethyl-beta-propiothetin dimethyl-sulfide-lyase (acrylate-forming)","type":"related"},{"name":"S,S-dimethyl-beta-propiothetin dimethyl-sulfide-lyase activity","type":"related"},{"name":"desulfhydrase activity","type":"related"}],"termid":"GO:0047869"}


id: GO:0016402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pristanoyl-CoA + O2 = trans-2,3-dehydropristanoyl-CoA + hydrogen peroxide.","definition_xrefs":["RHEA:40459","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA oxidase activity","termid":"GO:0003997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pristanoyl-CoA oxidase activity","secondary_identifiers":["Reactome:R-HSA-389889","Reactome:R-HSA-389891"],"termid":"GO:0016402"}


id: GO:0039642
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a virion in which the nucleic acid is confined.","definition_xrefs":["PMID:14291596","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virion nucleoid","termid":"GO:0039642"}


id: GO:0021634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the optic nerve. This process pertains to the initial formation of a structure from unspecified parts. The sensory optic nerve originates from the bipolar cells of the retina and conducts visual information to the brainstem. The optic nerve exits the back of the eye in the orbit, enters the optic canal, and enters the central nervous system at the optic chiasm (crossing) where the nerve fibers become the optic tract just prior to entering the hindbrain.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:jid","GOC:dph","GOC:dgh","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"optic nerve morphogenesis","termid":"GO:0021631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic nerve formation","synonyms":[{"name":"CN II biosynthesis","type":"related"},{"name":"CN II formation","type":"related"}],"termid":"GO:0021634"}


id: PBO:0028335
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K16_acetylation_at_centromere_central_core","termid":"PBO:0028335"}


id: PBO:0054020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1350","termid":"PBO:0054020"}


id: GO:0002776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of an antimicrobial peptide from a cell or a tissue. Such peptides may have protective properties against bacteria, fungi, viruses, or protozoa.","definition_xrefs":["ISBN:0781735149","PMID:11807545","GOC:add","PMID:15638771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion","termid":"GO:0002790"},{"relation_name":"part_of","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"antimicrobial peptide secretion","termid":"GO:0002776"}


id: MONDO:0012691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Noonan syndrome with multiple lentigines in which the cause of the disease is a mutation in the RAF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome with multiple lentigines","termid":"MONDO:0007893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0000426"],"is_obsolete":false,"name":"LEOPARD syndrome 2","secondary_identifiers":["OMIM:611554","GARD:15518","UMLS:C1969056","MEDGEN:370588","DOID:0080549","MESH:C537117"],"synonyms":[{"name":"LEOPARD syndrome 2","type":"exact"},{"name":"LPRD2","type":"related"},{"name":"Leopard syndrome type 2","type":"exact"},{"name":"leopard syndrome 2","type":"exact"}],"termid":"MONDO:0012691","xrefs":{"Monarch":{"xref_id":"0012691"}}}


id: MONDO:0042902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Say-Carpenter syndrome (obsolete MONDO:0042902)","termid":"MONDO:0042902","xrefs":{"Monarch":{"xref_id":"0042902"}}}


id: FYPO:0000298
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_02860:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02860","name":"wcs1delta","uniquename":"SJAG_02860:allele-1"},"SJAG_05242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05242","name":"wcs2delta","uniquename":"SJAG_05242:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[120013,120014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0008031"},{"annotations":[119870,119982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects a response to a stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process phenotype","termid":"FYPO:0000114"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01330":null,"SJAG_02860":null,"SJAG_05242":null},"genotype_count":3,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"wcs1delta":{"display_name":"wcs1delta","display_uniquename":"wcs1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02860:allele-1","expression":"Null"}]}]},"wcs2delta":{"display_name":"wcs2delta","display_uniquename":"wcs2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05242:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"cellular response phenotype","references_by_uniquename":{"PMID:21802294":null,"PMID:23873862":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330","SJAG_02860","SJAG_05242"],"single_locus_genotype_uniquenames":["wcs1delta","mad2delta","wcs2delta"],"synonyms":[{"name":"fission yeast cellular response phenotype","type":"exact"}],"termid":"FYPO:0000298","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000162":null,"FYPO:0004318":null,"FYPO:0008031":null,"FYPO_EXT:0000001":null}}


id: PBO:0080923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 1","termid":"PBO:0080923"}


id: MONDO:0020603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genodermatosis with great phenotypic variation and characterized most commonly by ichthyosis, chondrodysplasia punctata (CDP), asymmetric shortening of the limbs, cataracts and short stature.","definition_xrefs":["Orphanet:35173"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked ichthyosis syndrome","termid":"MONDO:0017269"},{"relation_name":"is_a","term_name":"X-linked chondrodysplasia punctata","termid":"MONDO:0010556"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"X-linked chondrodysplasia punctata 2","secondary_identifiers":["NORD:1005","MEDGEN:79381","NANDO:1200630","OMIM:302960","GARD:6189","DOID:0080352","UMLS:C0282102","NANDO:2201357"],"synonyms":[{"name":"CDPX2","type":"exact"},{"name":"CDPXD","type":"exact"},{"name":"Conrad Hunermann Happle syndrome","type":"exact"},{"name":"Conradi Hunermann syndrome","type":"exact"},{"name":"Conradi Hünermann Syndrome","type":"exact"},{"name":"Conradi-Hunermann syndrome","type":"exact"},{"name":"Conradi-Hunermann-Happle syndrome","type":"exact"},{"name":"Conradi-Hünermann-Happle syndrome","type":"exact"},{"name":"EBP chondrodysplasia punctata","type":"exact"},{"name":"Happle syndrome","type":"exact"},{"name":"X-linked chondrodysplasia punctata type 2","type":"exact"},{"name":"chondrodysplasia punctata 2 X-linked dominant","type":"exact"},{"name":"chondrodysplasia punctata 2, X-linked dominant","type":"exact"},{"name":"chondrodysplasia punctata caused by mutation in EBP","type":"exact"},{"name":"chondrodysplasia punctata, X-linked dominant, X-linked dominant","type":"exact"}],"termid":"MONDO:0020603","xrefs":{"Monarch":{"xref_id":"0020603"}}}


id: PBO:0042623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caudal type homeobox 4","termid":"PBO:0042623"}


id: PBO:0060143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotrophin","termid":"PBO:0060143"}


id: FYPO:0000051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiosis is abnormal. Meiosis refers specifically to the nuclear division phases of a meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiosis","secondary_identifiers":["FYPO:0000738"],"synonyms":[{"name":"abnormal meiotic nuclear division","type":"exact"},{"name":"meiosis defects","type":"exact"},{"name":"meiosis: abnormal","type":"related"}],"termid":"FYPO:0000051"}


id: PBO:0028237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_nucleus","termid":"PBO:0028237"}


id: PBO:0067954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 256","termid":"PBO:0067954"}


id: PATO:0001214
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001214 temparature_unit (obsolete PATO:0001214)","termid":"PATO:0001214"}


id: MONDO:0100144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tubulinopathy with material basis in TUBB2B that is characterized by variations in R390Q, quadrupedal locomotion, cerebellar hypoplasia and does not have basal ganglia malformations.","definition_xrefs":["PMID:28013290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"tubulinopathy","termid":"MONDO:0100153"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Uner Tan Syndrome","synonyms":[{"name":"recessive quadrupedalism","type":"exact"}],"termid":"MONDO:0100144","xrefs":{"Monarch":{"xref_id":"0100144"}}}


id: MONDO:0012439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Alagille syndrome","termid":"MONDO:0007318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005328","MONDO:0005267","MONDO:0004335"],"is_obsolete":false,"name":"Alagille syndrome due to a NOTCH2 point mutation","secondary_identifiers":["OMIM:610205","MEDGEN:341844","GARD:17252","Orphanet:261629","UMLS:C1857761"],"synonyms":[{"name":"ALGS2","type":"related"},{"name":"Alagille syndrome 2","type":"related"},{"name":"Alagille syndrome due to a NOTCH2 point mutation","type":"exact"},{"name":"Alagille syndrome type 2","type":"exact"},{"name":"Alagille-Watson syndrome due to a NOTCH2 point mutation","type":"exact"},{"name":"Arteriohepatic dysplasia due to a NOTCH2 point mutation","type":"exact"},{"name":"syndromic bile duct paucity due to a NOTCH2 point mutation","type":"exact"}],"termid":"MONDO:0012439","xrefs":{"Monarch":{"xref_id":"0012439"}}}


id: PBO:0075240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNX10 antisense RNA 1","termid":"PBO:0075240"}


id: MONDO:0011515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete papillary renal cell carcinoma (obsolete MONDO:0011515)","termid":"MONDO:0011515","xrefs":{"Monarch":{"xref_id":"0011515"}}}


id: PBO:0038514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily E member 1","termid":"PBO:0038514"}


id: PBO:0077117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 29","termid":"PBO:0077117"}


id: GO:2001189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"is_a","term_name":"negative regulation of T cell activation","termid":"GO:0050868"},{"relation_name":"is_a","term_name":"regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:2001188"},{"relation_name":"negatively_regulates","term_name":"T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:0002291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","synonyms":[{"name":"negative regulation of T lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"negative regulation of T-cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"negative regulation of T-lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"}],"termid":"GO:2001189"}


id: GO:1903210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a glomerular visceral epithelial cell.","definition_xrefs":["GOC:TermGenie","GO_REF:0000085","PMID:23515840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"podocyte apoptotic process","synonyms":[{"name":"glomerular podocyte apoptosis","type":"narrow"},{"name":"glomerular podocyte apoptotic process","type":"exact"},{"name":"glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"podocyte apoptosis","type":"narrow"}],"termid":"GO:1903210"}


id: PBO:0025525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Hsp104","termid":"PBO:0025525"}


id: GO:0150045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic signaling by nitric oxide.","definition_xrefs":["PMID:26311509","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"regulates","term_name":"synaptic signaling by nitric oxide","termid":"GO:0099163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic signaling by nitric oxide","termid":"GO:0150045"}


id: GO:0036444
data:
  {"annotated_genes":["SJAG_03399"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97680],"is_not":false,"summary":null,"term":"GO:0036444"}]},"cv_name":"biological_process","definition":"A process in which a calcium ion (Ca2+) is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial calcium ion transmembrane transport","termid":"GO:0006851"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"calcium import into the mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcium ion import into mitochondrion","type":"broad"},{"name":"calcium ion transmembrane import into mitochondrion","type":"exact"},{"name":"mitochondrial calcium ion import","type":"broad"},{"name":"mitochondrial calcium uptake","type":"exact"}],"termid":"GO:0036444","terms_by_termid":{"GO:0036444":null}}


id: PBO:0081646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF571 antisense RNA 1","termid":"PBO:0081646"}


id: MONDO:1011329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Keratoconjunctivitis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis, non-human animal","termid":"MONDO:1010330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratoconjunctivitis, non-human animal","termid":"MONDO:1011329","xrefs":{"Monarch":{"xref_id":"1011329"}}}


id: MONDO:0016908
data:
  {"annotated_genes":["SJAG_00112"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014848"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 9","termid":"MONDO:0016874"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00112":null},"genotype_count":0,"is_obsolete":false,"name":"partial monosomy of the long arm of chromosome 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1826024","GARD:20829","icd11.foundation:1051626600","Orphanet:262074","UMLS:C5679677"],"synonyms":[{"name":"partial deletion of chromosome 9q","type":"exact"},{"name":"partial deletion of the long arm of chromosome 9","type":"exact"},{"name":"partial monosomy of chromosome 9q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome type 9","type":"exact"}],"termid":"MONDO:0016908","terms_by_termid":{"MONDO:0014848":null},"xrefs":{"Monarch":{"xref_id":"0016908"}}}


id: PBO:0042616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol synthase 2","termid":"PBO:0042616"}


id: PBO:0016907
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seg1-Like Eisosome protein","termid":"PBO:0016907"}


id: PBO:0064342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin domain containing 2","termid":"PBO:0064342"}


id: GO:0051909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-hydroxypropenoate = propynoate + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete acetylenecarboxylate hydratase activity, producing 3-hydroxypropenoate (obsolete GO:0051909)","synonyms":[{"name":"3-hydroxypropenoate dehydratase activity","type":"exact"},{"name":"acetylenecarboxylate hydratase activity","type":"broad"},{"name":"acetylenemonocarboxylate hydratase activity","type":"broad"},{"name":"alkynoate hydratase activity","type":"broad"}],"termid":"GO:0051909"}


id: GO:0060438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a trachea over time, from its formation to the mature structure. The trachea is the portion of the airway that attaches to the bronchi as it branches.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea development","termid":"GO:0060438"}


id: MOD:01568
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01568"}


id: MONDO:0003021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm arising from the brain, spinal cord or meninges.","definition_xrefs":["NCIT:C5450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system sarcoma","termid":"MONDO:0002217"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"central nervous system angiosarcoma","secondary_identifiers":["UMLS:C1332875","DOID:4504","MEDGEN:272441"],"synonyms":[{"name":"CNS angiosarcoma","type":"exact"},{"name":"CNS hemangiosarcoma","type":"exact"},{"name":"angiosarcoma (disease) of central nervous system","type":"exact"},{"name":"angiosarcoma of CNS","type":"exact"},{"name":"angiosarcoma of central nervous system","type":"exact"},{"name":"angiosarcoma of the CNS","type":"exact"},{"name":"angiosarcoma of the central nervous system","type":"exact"},{"name":"central nervous system angiosarcoma","type":"exact"},{"name":"central nervous system angiosarcoma (disease)","type":"exact"},{"name":"central nervous system hemangiosarcoma","type":"exact"},{"name":"hemangiosarcoma of CNS","type":"exact"},{"name":"hemangiosarcoma of central nervous system","type":"exact"},{"name":"hemangiosarcoma of the CNS","type":"exact"},{"name":"hemangiosarcoma of the central nervous system","type":"exact"}],"termid":"MONDO:0003021","xrefs":{"Monarch":{"xref_id":"0003021"}}}


id: FYPO:0007718
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which SMN complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal SMN complex assembly","synonyms":[{"name":"abnormal SMN complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal SMN complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007718"}


id: PBO:0059200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X7, pseudogene","termid":"PBO:0059200"}


id: GO:0050016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kynurenate + donor-H2 + O2 = 7,8-dihydro-7,8-dihydroxykynurenate + acceptor.","definition_xrefs":["EC:1.14.99.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"kynurenine 7,8-hydroxylase activity","secondary_identifiers":["MetaCyc:KYNURENINE-78-HYDROXYLASE-RXN","RHEA:11968"],"synonyms":[{"name":"kynurenate 7,8-hydroxylase activity","type":"related"},{"name":"kynurenate,hydrogen-donor:oxygen oxidoreductase (hydroxylating)","type":"related"},{"name":"kynurenic acid hydroxylase activity","type":"related"},{"name":"kynurenic hydroxylase activity","type":"related"}],"termid":"GO:0050016"}


id: GO:0034576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-isopropylacetanilide + OH- = N-isopropylaniline + acetate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N-isopropylacetanilide amidohydrolase activity (obsolete GO:0034576)","termid":"GO:0034576"}


id: GO:0000107
data:
  {"annotated_genes":["SJAG_03775"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76263],"is_not":false,"summary":null,"term":"GO:0000107"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoribulosylformimino-AICAR-P + L-glutamine = D-erythro-imidazole-glycerol-phosphate + aminoimidazole carboxamide ribonucleotide + L-glutamate + 2 H+.","definition_xrefs":["RHEA:24793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03775":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"imidazoleglycerol-phosphate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLUTAMIDOTRANS-RXN"],"synonyms":[{"name":"glutamine amidotransferase:cyclase activity","type":"broad"},{"name":"imidazole glycerol phosphate synthase activity","type":"exact"},{"name":"imidazole-glycerol-phosphate synthase activity","type":"related"},{"name":"imidazoleglycerol phosphate synthase activity","type":"exact"}],"termid":"GO:0000107","terms_by_termid":{"GO:0000107":null}}


id: GO:0042669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into an auditory hair cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of inner ear auditory receptor cell differentiation","termid":"GO:0045607"},{"relation_name":"regulates","term_name":"auditory receptor cell fate specification","termid":"GO:0042667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inner ear auditory receptor cell fate specification","synonyms":[{"name":"regulation of auditory hair cell fate specification","type":"exact"}],"termid":"GO:0042669"}


id: GO:0071462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of water.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to water","termid":"GO:0009415"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"},{"relation_name":"is_a","term_name":"cellular response to acid chemical","termid":"GO:0071229"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to water stimulus","termid":"GO:0071462"}


id: MONDO:0000976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare benign adipose tissue neoplasm of the paratesticular tissues. It is incidentally discovered and presents as a non-tender scrotal mass. It affects patients over a wide age range.","definition_xrefs":["NCIT:C6384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign reproductive system neoplasm","termid":"MONDO:0000383"},{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paratesticular lipoma","secondary_identifiers":["MEDGEN:233310","UMLS:C1335348","DOID:10207"],"synonyms":[{"name":"paratesticular lipoma","type":"exact"}],"termid":"MONDO:0000976","xrefs":{"Monarch":{"xref_id":"0000976"}}}


id: PBO:0085675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in polar growth, functionally redundant with Boi2p; required for fusion of secretory vesicles with plasma membrane at sites of polarized growth; interacts with bud-emergence protein Bem1p; contains an SH3 (src homology 3) domain and a PH (pleckstrin homology) domain; relocalizes from bud neck to cytoplasm upon DNA replication stress; BOI1 has a paralog, BOI2, that arose from the whole genome duplication","termid":"PBO:0085675"}


id: PBO:0066747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 45","termid":"PBO:0066747"}


id: PBO:0067649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 824, pseudogene","termid":"PBO:0067649"}


id: MONDO:0011208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant atrophic papulosis (MAP) is a rare, chronic, thrombo-obliterative vasculopathy characterized by papular skin lesions with central porcelain-white atrophy and a surrounding teleangiectatic rim. Systemic lesions may affect the gastrointestinal tract and the central nervous system (CNS) and are potentially lethal.","definition_xrefs":["Orphanet:679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"malignant atrophic papulosis","secondary_identifiers":["OMIM:602248","UMLS:C0221011","NCIT:C84835","SCTID:400171002","MEDGEN:113138","icd11.foundation:792094526","ICD9:447.8","GARD:6249","MESH:D054853","MedDRA:10064281"],"synonyms":[{"name":"Degos Disease","type":"exact"},{"name":"Degos disease","type":"exact"},{"name":"Degos syndrome","type":"related"},{"name":"Degos's malignant atrophic papulosis","type":"related"},{"name":"Kohlmeier-Degos disease","type":"exact"},{"name":"Kohlmeier-Degos-Delort-Tricort syndrome","type":"exact"},{"name":"Köhlmeier-Degos disease","type":"exact"},{"name":"Köhlmeier-Degos-Delort-Tricort syndrome","type":"exact"},{"name":"atrophic papulosis, malignant","type":"related"},{"name":"malignant atrophic papulosis","type":"exact"},{"name":"papulosis atrophican maligna","type":"exact"},{"name":"papulosis, malignant atrophic","type":"related"}],"termid":"MONDO:0011208","xrefs":{"Monarch":{"xref_id":"0011208"}}}


id: GO:1903634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of leucine-tRNA ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:2280766"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of leucine-tRNA ligase activity (obsolete GO:1903634)","synonyms":[{"name":"down regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"down regulation of leucine translase activity","type":"exact"},{"name":"down regulation of leucine-tRNA ligase activity","type":"exact"},{"name":"down regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"down regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"down regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"down regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"down-regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"down-regulation of leucine translase activity","type":"exact"},{"name":"down-regulation of leucine-tRNA ligase activity","type":"exact"},{"name":"down-regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"down-regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down-regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"downregulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"downregulation of leucine translase activity","type":"exact"},{"name":"downregulation of leucine-tRNA ligase activity","type":"exact"},{"name":"downregulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"downregulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"downregulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"downregulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"downregulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"},{"name":"inhibition of L-leucine:tRNALeu ligase (AMP-forming)","type":"narrow"},{"name":"inhibition of leucine translase activity","type":"narrow"},{"name":"inhibition of leucine-tRNA ligase activity","type":"narrow"},{"name":"inhibition of leucine-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of leucyl-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of leucyl-transfer RNA synthetase activity","type":"narrow"},{"name":"inhibition of leucyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"inhibition of leucyl-transfer ribonucleic acid synthetase activity","type":"narrow"},{"name":"negative regulation of L-leucine:tRNALeu ligase (AMP-forming)","type":"exact"},{"name":"negative regulation of leucine translase activity","type":"exact"},{"name":"negative regulation of leucine-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of leucyl-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of leucyl-transfer RNA synthetase activity","type":"exact"},{"name":"negative regulation of leucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"negative regulation of leucyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1903634"}


id: PBO:0084891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translational activator of the COB mRNA; membrane protein that interacts with translating ribosomes, acts on the COB mRNA 5'-untranslated leader","termid":"PBO:0084891"}


id: PBO:0074446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 47","termid":"PBO:0074446"}


id: PBO:0113238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-histone component of centromeric chromatin; acts as a Cse4p specific chaperone that recognizes the centromere-targeting domain in the HFD of histone H3 variant, Cse4p, and recruits it to centromeres; involved in the assembly and maintenance of Cse4-H4 at centromeres; required for kinetochore assembly and G2/M progression; may protect Cse4p from ubiquitination; homolog of mammalian HJURP","termid":"PBO:0113238"}


id: GO:0099086
data:
  {"annotated_genes":["SJAG_07002","SJAG_02652","SJAG_00172","SJAG_02490","SJAG_04748","SJAG_03438","SJAG_04303","SJAG_05333","SJAG_03843"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105231,91796,95083,90658,115925,110014,89381,111501,109921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030998"}]},"cv_name":"cellular_component","definition":"A proteinaceous scaffold found between homologous chromosomes during meiosis.","definition_xrefs":["GOC:vw","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00172":null,"SJAG_02490":null,"SJAG_02652":null,"SJAG_03438":null,"SJAG_03843":null,"SJAG_04303":null,"SJAG_04748":null,"SJAG_05333":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"synaptonemal structure","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099086","terms_by_termid":{"GO:0030998":null}}


id: MONDO:0015036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly with cerebellar hypoplasia type C (LCHc) is a severe form of lissencephaly with cerebellar hypoplasia characterized by severe microcephaly, cleft palate, and severe cerebellar and brainstem hypoplasia leading to neonatal death.","definition_xrefs":["Orphanet:100013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly with cerebellar hypoplasia","termid":"MONDO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly with cerebellar hypoplasia type C","secondary_identifiers":["GARD:19733","SCTID:715820004","UMLS:C4274992","MEDGEN:900624","icd11.foundation:1837040262"],"termid":"MONDO:0015036","xrefs":{"Monarch":{"xref_id":"0015036"}}}


id: GO:0061003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron projection development","termid":"GO:0010976"},{"relation_name":"is_a","term_name":"positive regulation of dendrite morphogenesis","termid":"GO:0050775"},{"relation_name":"is_a","term_name":"positive regulation of dendritic spine development","termid":"GO:0060999"},{"relation_name":"is_a","term_name":"regulation of dendritic spine morphogenesis","termid":"GO:0061001"},{"relation_name":"positively_regulates","term_name":"dendritic spine morphogenesis","termid":"GO:0060997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic spine morphogenesis","termid":"GO:0061003"}


id: PBO:0015702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair ligase Lig4","termid":"PBO:0015702"}


id: PBO:0112396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type, alternative splicing factor 45","termid":"PBO:0112396"}


id: PBO:0042617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneodesmosin","termid":"PBO:0042617"}


id: MONDO:0100273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of plasmalogen biosynthesis in which the cause of the disease is a mutation in the GNPAT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of plasmalogens biosynthesis","termid":"MONDO:0017986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"glyceronephosphate O-acyltransferase deficiency","synonyms":[{"name":"GNPAT deficiency","type":"exact"},{"name":"glyceronephosphate O-acyltransferase deficiency","type":"exact"}],"termid":"MONDO:0100273","xrefs":{"Monarch":{"xref_id":"0100273"}}}


id: PBO:0064715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 51","termid":"PBO:0064715"}


id: MONDO:0000367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic infection caused by tapeworms of the genus Taenia. Humans are infected by eating undercooked or raw meat of infected animals. It is usually an asymptomatic infection and patients may become aware of the infection by noticing segments of the tapeworm in their feces. If symptoms are present, they include nausea, abdominal pain, indigestion, constipation, or diarrhea.","definition_xrefs":["NCIT:C85180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal helminthiasis","termid":"MONDO:0024271"},{"relation_name":"is_a","term_name":"Cestode infectious disease","termid":"MONDO:0042488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"taeniasis","secondary_identifiers":["MESH:D013622","MEDGEN:11701","UMLS:C0039254","DOID:0050596","EFO:1001433","icd11.foundation:733748279","SCTID:69163003","ICD9:123.2","ICD10CM:B68"],"synonyms":[{"name":"Taenia infection","type":"exact"},{"name":"Taenia saginata infectious disease","type":"related"},{"name":"beef tapeworm infection","type":"related"},{"name":"infection by Taeniarhynchus saginatus","type":"related"},{"name":"infection by taenia saginata","type":"related"},{"name":"infections, Taenia","type":"related"},{"name":"taenia saginata infection","type":"exact"},{"name":"unarmed tapeworm infection","type":"related"}],"termid":"MONDO:0000367","xrefs":{"Monarch":{"xref_id":"0000367"}}}


id: FYPO:0004141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of glutathione (GSH) measured in a cell that is subject to nitrogen starvation is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular glutathione level during nitrogen starvation","synonyms":[{"name":"decreased cellular GSH level during nitrogen starvation","type":"exact"},{"name":"decreased cellular L-gamma-glutamyl-L-cysteinylglycine level during nitrogen starvation","type":"exact"},{"name":"decreased cellular glutathione level during nitrogen depletion","type":"exact"},{"name":"decreased cellular glutathione level during nitrogen deprivation","type":"exact"},{"name":"decreased cellular reduced glutathione level during nitrogen starvation","type":"exact"},{"name":"decreased glutathione accumulation during nitrogen starvation","type":"related"},{"name":"reduced cellular glutathione level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004141"}


id: PBO:0064300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polo like kinase 3","termid":"PBO:0064300"}


id: PBO:0051833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 7","termid":"PBO:0051833"}


id: PBO:0062646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily Q member 1 pseudogene","termid":"PBO:0062646"}


id: PBO:0108956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR77 pseudogene 1","termid":"PBO:0108956"}


id: PBO:0038826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 33","termid":"PBO:0038826"}


id: PBO:0055693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIX1 and RIOK2 antisense RNA 1","termid":"PBO:0055693"}


id: MONDO:0007817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immediate hypersensitivity reaction - type I reaction, involves immunoglobulin E (IgE)-mediated release of chemical mediators from mast cells and basophils. Th2 cells produce IL-4 and IL-13, which then act on B cells to promote the production of antigen-specific IgE. Reexposure to the antigen can then result in the antigen binding to and cross-linking the bound IgE antibodies on the mast cells and basophils. This causes the release of preformed mediators (histamine, tryptase, tryptase, chemotactic factors), newly synthesized mediators (leukotrienes, prostaglandin, thromboxane, platelet-activating factor, adenosine, bradykinin), and cytokines from these cells that results in structural and functional changes to the affected tissue.","definition_xrefs":["NCIT:C3116"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"atopic eczema","termid":"MONDO:0004980"},{"relation_name":"is_a","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"IgE responsiveness, atopic","secondary_identifiers":["OMIM:147050","MEDGEN:327063","UMLS:C1840253","MESH:C564133"],"synonyms":[{"name":"Atopic hypersensitivity","type":"related"},{"name":"IGER","type":"related"},{"name":"IgE response underlying allergic asthma and rhinitis","type":"related"},{"name":"IgE responsiveness, ATOPIC","type":"related"},{"name":"IgE responsiveness, atopic","type":"exact"},{"name":"IgE, elevated level of","type":"exact"},{"name":"IgE, level of","type":"related"},{"name":"Immunoglobulin E, basic level of, in serum","type":"related"},{"name":"atopy, susceptibility to","type":"related"},{"name":"immediate hypersensitivity","type":"exact"},{"name":"type 1 hypersensitivity","type":"exact"},{"name":"type 1 hypersensitivity reaction","type":"exact"},{"name":"type I hypersensitivity","type":"exact"},{"name":"type I hypersensitivity reaction","type":"exact"},{"name":"type I immediate hypersensitivity reaction","type":"exact"}],"termid":"MONDO:0007817","xrefs":{"Monarch":{"xref_id":"0007817"}}}


id: PBO:0081511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 417","termid":"PBO:0081511"}


id: PBO:0117235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate transmembrane transporter family","termid":"PBO:0117235"}


id: GO:0008726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alkanesulfonate + O2 + FMNH2 = an aldehyde + sulfite + H2O + FMN.","definition_xrefs":["MetaCyc:RXN0-280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alkanesulfonate monooxygenase activity","secondary_identifiers":["EC:1.14.14.5","RHEA:23064"],"synonyms":[{"name":"FMNH(2)-dependent aliphatic sulfonate monooxygenase activity","type":"related"},{"name":"FMNH(2)-dependent alkanesulfonate monooxygenase activity","type":"exact"},{"name":"FMNH2-dependent aliphatic sulfonate monooxygenase activity","type":"related"},{"name":"SsuD","type":"related"},{"name":"alkanesulfonate, reduced-FMN:oxygen oxidoreductase activity","type":"related"},{"name":"alkanesulphonate monooxygenase activity","type":"exact"},{"name":"sulfate starvation-induced protein 6 activity","type":"related"}],"termid":"GO:0008726"}


id: FYPO:0001123
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a spore is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spore shape","termid":"FYPO:0002467"},{"relation_name":"is_a","term_name":"increased cell length","termid":"FYPO:0006633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"elongated spore","synonyms":[{"name":"long spores","type":"exact"}],"termid":"FYPO:0001123"}


id: PBO:0083310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF ARG5,6/YER069W","termid":"PBO:0083310"}


id: GO:0019696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The degradation of toluene to form pyruvate and acetaldehyde; the first step in the pathway is the oxidation of toluene to form toluene-cis-1,2-dihydrodiol.","definition_xrefs":["MetaCyc:TOLUENE-DEG-DIOL-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene oxidation","termid":"GO:0019600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene oxidation via toluene-cis-1,2-dihydrodiol","termid":"GO:0019696"}


id: PBO:0041940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 8","termid":"PBO:0041940"}


id: GO:0052735
data:
  {"annotated_genes":["SJAG_04453","SJAG_00499"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79474,110529],"is_not":false,"summary":null,"term":"GO:0052735"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a cytidine in tRNA + S-adenosyl-L-methionine = an N3-methylcytidine in tRNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:60908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (cytidine) methyltransferase activity","termid":"GO:0016427"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00499":null,"SJAG_04453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140098","GO:0016741","GO:0016740","GO:0140101"],"is_obsolete":false,"name":"tRNA (cytidine-3-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"S-adenosyl-L-methionine:tRNA (cytosine-3-)-methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:tRNA cytosine-3-methyltransferase activity","type":"exact"},{"name":"tRNA (cytosine 3)-methyltransferase activity","type":"exact"},{"name":"tRNA (cytosine-3-)-methyltransferase activity","type":"exact"},{"name":"tRNA cytosine 3-methyltransferase activity","type":"exact"},{"name":"tRNA cytosine-3-methyltransferase activity","type":"exact"},{"name":"transfer ribonucleate cytosine 3-methyltransferase activity","type":"exact"}],"termid":"GO:0052735","terms_by_termid":{"GO:0052735":null}}


id: MONDO:0012361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 5","secondary_identifiers":["MEDGEN:322783","OMIM:609903","UMLS:C1835929"],"synonyms":[{"name":"SLEB5","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 5","type":"exact"}],"termid":"MONDO:0012361","xrefs":{"Monarch":{"xref_id":"0012361"}}}


id: PBO:0046379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal transmembrane epsin interactor 3","termid":"PBO:0046379"}


id: GO:0033232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + D-methionine(out/in) = ADP + phosphate + D-methionine(in/out).","definition_xrefs":["GOC:mlg","PMID:12169620","PMID:12819857","PMID:18621668","RHEA:29767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type amino acid transporter activity","termid":"GO:0015424"},{"relation_name":"is_a","term_name":"ATPase-coupled carboxylic acid transmembrane transporter activity","termid":"GO:0033284"},{"relation_name":"is_a","term_name":"D-amino acid transmembrane transporter activity","termid":"GO:0042943"},{"relation_name":"is_a","term_name":"methionine transmembrane transporter activity","termid":"GO:0043865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type D-methionine transporter activity","secondary_identifiers":["GO:0032521","GO:1901243","GO:0048474","EC:7.4.2.11","GO:0032522","MetaCyc:TRANS-RXN0-202"],"synonyms":[{"name":"ATP-dependent D-methionine transporter activity","type":"related"},{"name":"ATP-dependent methionine transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled D-methionine transporter activity","type":"related"},{"name":"ATPase-coupled methionine transmembrane transporter activity","type":"related"},{"name":"D-methionine exporter","type":"related"},{"name":"D-methionine importer","type":"related"},{"name":"D-methionine transmembrane transporter activity","type":"related"},{"name":"D-methionine transporter activity","type":"related"},{"name":"D-methionine-exporting ATPase activity","type":"related"},{"name":"D-methionine-importing ATPase activity","type":"related"},{"name":"D-methionine-transporting ATPase activity","type":"related"},{"name":"methionine transmembrane-transporting ATPase activity","type":"related"}],"termid":"GO:0033232"}


id: MONDO:1010068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Situs inversus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"situs inversus, non-human animal","secondary_identifiers":["OMIA:001102"],"termid":"MONDO:1010068","xrefs":{"Monarch":{"xref_id":"1010068"}}}


id: MONDO:0014628
data:
  {"annotated_genes":["SJAG_00233"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85568],"is_not":false,"summary":null,"term":"MONDO:0014628"}]},"cv_name":"mondo","definition":"Any bilateral striopallidodentate calcinosis in which the cause of the disease is a mutation in the XPR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral striopallidodentate calcinosis","termid":"MONDO:0008947"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"basal ganglia calcification, idiopathic, 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16107","MEDGEN:901404","OMIM:616413","UMLS:C4225335"],"synonyms":[{"name":"IBGC6","type":"related"},{"name":"XPR1 bilateral striopallidodentate calcinosis","type":"exact"},{"name":"basal ganglia calcification, idiopathic, 6","type":"exact"},{"name":"basal ganglia calcification, idiopathic, type 6","type":"exact"},{"name":"bilateral striopallidodentate calcinosis caused by mutation in XPR1","type":"exact"}],"termid":"MONDO:0014628","terms_by_termid":{"MONDO:0014628":null},"xrefs":{"Monarch":{"xref_id":"0014628"}}}


id: PR:Q9US05
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein AATF that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00701","PANTHER:PTHR15565:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bfr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.08c","secondary_identifiers":["UniProtKB:Q9US05"],"synonyms":[{"name":"Spom972h-AATF","type":"exact"}],"termid":"PR:Q9US05"}


id: GO:0003161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cardiac conduction system over time, from its formation to the mature structure. The cardiac conduction system consists of specialized cardiomyocytes that regulate the frequency of heart beat.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac conduction system development","synonyms":[{"name":"cardiac impulse conducting system development","type":"exact"},{"name":"heart conduction system development","type":"exact"}],"termid":"GO:0003161"}


id: PBO:0083419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized gene YFR055W","termid":"PBO:0083419"}


id: GO:0075320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ascus development, a saclike structure produced by fungi of the phylum Ascomycota (sac fungi) in which sexually produced spores (ascospores), usually four or eight in number, are formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of ascus development","termid":"GO:0075318"},{"relation_name":"negatively_regulates","term_name":"ascus development","termid":"GO:0075317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ascus development","termid":"GO:0075320"}


id: MONDO:1010611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thyroiditis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroiditis, non-human animal","termid":"MONDO:1010059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroiditis, dog","secondary_identifiers":["OMIA:001005-9615"],"termid":"MONDO:1010611","xrefs":{"Monarch":{"xref_id":"1010611"}}}


id: PBO:0070408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A2 pseudogene 2","termid":"PBO:0070408"}


id: PBO:0053007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal associated membrane protein 2","termid":"PBO:0053007"}


id: GO:0140621
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A short filamentous structure on the surface of a bacterial cell distinguished from other pili by their D-mannose-sensitive agglutinatination of erythrocytes. In E. coli, type I pili consist of a short tip fibrillum made up of the adhesin protein (FimH) and two minor subunits (FimG and FimF) that is joined to the pilus rod, a homopolymer of ~1000 FimA subunits.","definition_xrefs":["PMID:29345620","PMID:28496159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus","termid":"GO:0009289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type I pilus","synonyms":[{"name":"type 1 pilus","type":"exact"},{"name":"type I fimbriae","type":"exact"},{"name":"type I pili","type":"exact"}],"termid":"GO:0140621"}


id: FYPO:0004042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms pieces of a septum rather than a septum that completely bisects the cell.","definition_xrefs":["PMID:21931816","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000032","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"fragmented septum","synonyms":[{"name":"fragmented septum during mitotic cell cycle","type":"related"},{"name":"fragmented septum during vegetative growth","type":"exact"}],"termid":"FYPO:0004042"}


id: PBO:0057005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 99a","termid":"PBO:0057005"}


id: MONDO:1011983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tapetal degeneration, non-human animal","secondary_identifiers":["OMIA:000980"],"termid":"MONDO:1011983","xrefs":{"Monarch":{"xref_id":"1011983"}}}


id: PBO:0001726
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.24","termid":"PBO:0001726"}


id: PBO:0038586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACAA2 pseudogene 1","termid":"PBO:0038586"}


id: MONDO:0006589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Contact dermatitis associated with allergens or irritants found in the workplace.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contact dermatitis","termid":"MONDO:0005480"},{"relation_name":"is_a","term_name":"occupational disorder","termid":"MONDO:0100366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"occupational dermatitis","secondary_identifiers":["MEDGEN:14449","ICD9:692.9","EFO:1000744","MESH:D009783","UMLS:C0028796","SCTID:402587003","NCIT:C34859","DOID:4404"],"synonyms":[{"name":"occupational allergic contact dermatitis","type":"exact"},{"name":"occupational dermatitis","type":"exact"},{"name":"occupational eczema","type":"exact"},{"name":"occupational eczema (disorder) [ambiguous]","type":"exact"}],"termid":"MONDO:0006589","xrefs":{"Monarch":{"xref_id":"0006589"}}}


id: FYPO:0002330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 4 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone H3-K4 methylation during vegetative growth","synonyms":[{"name":"abnormal histone H3 K4 methylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K4 methylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K4me during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K4 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002330"}


id: MONDO:1012223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive axonopathy, non-human animal","termid":"MONDO:1011856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive axonopathy, dog","secondary_identifiers":["OMIA:000825-9615"],"termid":"MONDO:1012223","xrefs":{"Monarch":{"xref_id":"1012223"}}}


id: PBO:0059903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 26","termid":"PBO:0059903"}


id: PBO:0062788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 2","termid":"PBO:0062788"}


id: PBO:0073688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIX homeobox 1","termid":"PBO:0073688"}


id: PATO:0001700
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sleep pattern which has irregular start and/or end times.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep pattern","termid":"PATO:0000062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"irregular sleep pattern","termid":"PATO:0001700"}


id: GO:0110094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another using polyphosphate as the signal.","definition_xrefs":["PMID:28584190","PMID:27519410","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"polyphosphate-mediated signaling","synonyms":[{"name":"polyphosphate signaling","type":"exact"}],"termid":"GO:0110094"}


id: MONDO:1010531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, sheep","secondary_identifiers":["OMIA:000197-9940"],"termid":"MONDO:1010531","xrefs":{"Monarch":{"xref_id":"1010531"}}}


id: MONDO:0005957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with nematodes of the genus Setaria. This condition is usually seen in cattle and equines and is of little pathogenic significance, although migration of the worm to the eye may lead to blindness.","definition_xrefs":["MESH:D012719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rhabditida infectious disease","termid":"MONDO:0005943"},{"relation_name":"is_a","term_name":"filariasis","termid":"MONDO:0016075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"setariasis","secondary_identifiers":["MEDGEN:11393","SCTID:4414005","DOID:1079","UMLS:C0036850"],"synonyms":[{"name":"Setaria <nematode> caused disease or disorder","type":"exact"},{"name":"Setaria <nematode> disease or disorder","type":"exact"},{"name":"Setaria <nematode> infectious disease","type":"exact"},{"name":"infectious disease by Setaria","type":"exact"}],"termid":"MONDO:0005957","xrefs":{"Monarch":{"xref_id":"0005957"}}}


id: PBO:0004523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-6-phosphate isomerase (predicted)","termid":"PBO:0004523"}


id: GO:0035256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G protein-coupled glutamate receptor (a metabotropic glutamate receptor).","definition_xrefs":["GOC:bf","ISBN:0198506732","PMID:9069287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"},{"relation_name":"is_a","term_name":"glutamate receptor binding","termid":"GO:0035254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled glutamate receptor binding","synonyms":[{"name":"G-protein coupled glutamate receptor binding","type":"exact"},{"name":"metabotropic glutamate receptor binding","type":"exact"}],"termid":"GO:0035256"}


id: GO:1990962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a xenobiotic through the blood-brain barrier.","definition_xrefs":["PMID:25053619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transport","termid":"GO:0042908"},{"relation_name":"is_a","term_name":"transport across blood-brain barrier","termid":"GO:0150104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"xenobiotic transport across blood-brain barrier","synonyms":[{"name":"drug transport across blood-brain barrier","type":"related"}],"termid":"GO:1990962"}


id: GO:0042580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialised tubular organelle, assembled in hexagonal bundles within an external membrane. Mannosomes are specific to molluscs and are thought to be involved in a general stress reaction.","definition_xrefs":["GOC:jl","PMID:9799531","PMID:11912051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005777","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mannosome","termid":"GO:0042580"}


id: PBO:0069277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 533, pseudogene","termid":"PBO:0069277"}


id: PBO:0034629
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_centromere_clustering_with_centromeres_dissociated_from_spindle_pole_body","termid":"PBO:0034629"}


id: GO:0030836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of actin depolymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament depolymerization","termid":"GO:0030834"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of protein depolymerization","termid":"GO:1901881"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"actin filament depolymerization","termid":"GO:0030042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"positive regulation of actin filament depolymerization","secondary_identifiers":["GO:0030045"],"synonyms":[{"name":"actin filament destabilization","type":"exact"},{"name":"activation of actin filament depolymerization","type":"narrow"},{"name":"positive regulation of actin depolymerization","type":"exact"},{"name":"positive regulation of actin polymerization and/or depolymerization","type":"broad"},{"name":"stimulation of actin filament depolymerization","type":"narrow"},{"name":"up regulation of actin filament depolymerization","type":"exact"},{"name":"up-regulation of actin filament depolymerization","type":"exact"},{"name":"upregulation of actin filament depolymerization","type":"exact"}],"termid":"GO:0030836"}


id: MONDO:0004351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that arises within the eye. Signs and symptoms include decreased vision, uveitis, and vitreous floaters.","definition_xrefs":["NCIT:C9184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye lymphoma","termid":"MONDO:0004034"},{"relation_name":"is_a","term_name":"primary organ-specific lymphoma","termid":"MONDO:0017207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005328"],"is_obsolete":false,"name":"intraocular lymphoma","secondary_identifiers":["SCTID:420788006","MONDO:0017206","Orphanet:279904","UMLS:C0281658","GARD:21063","MEDGEN:79344","DOID:775","ICD9:200.50","MESH:D064090"],"synonyms":[{"name":"PIOL","type":"exact"},{"name":"intraocular lymphoma","type":"exact"},{"name":"primary intraocular lymphoma","type":"exact"},{"name":"primary intraocular non-Hodgkin's lymphoma","type":"exact"}],"termid":"MONDO:0004351","xrefs":{"Monarch":{"xref_id":"0004351"}}}


id: PBO:0068051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 356","termid":"PBO:0068051"}


id: MONDO:0008737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial afibrinogenemia is a coagulation disorder characterized by bleeding symptoms due to a complete absence of circulating fibrinogen.","definition_xrefs":["Orphanet:98880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial dysfibrinogenemia","termid":"MONDO:0014452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital afibrinogenemia","secondary_identifiers":["NCIT:C98130","UMLS:C2584774","GARD:5761","NANDO:2200672","SCTID:154818001","MESH:D000347","MEDGEN:749036","OMIM:202400","DOID:2236"],"synonyms":[{"name":"afibrinogenemia","type":"related"},{"name":"afibrinogenemia congenital","type":"related"},{"name":"afibrinogenemia, congenital","type":"related"},{"name":"factor I deficiency","type":"narrow"},{"name":"familial afibrinogenemia","type":"related"},{"name":"fibrinogen deficiency","type":"exact"},{"name":"hypofibrinogenemia, congenital","type":"related"}],"termid":"MONDO:0008737","xrefs":{"Monarch":{"xref_id":"0008737"}}}


id: MONDO:0018203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, premature aging syndrome characterized by adulthood-onset cutaneous manifestations that result in a prematurely aged appearance (i.e. premature thinning and graying of scalp hair, loss of subcutaneous fat, tightening of skin) associated with prominent cardiovascular manifestations, such as accelerated atherosclerosis, calcific valve disease, and cardiomyopathy. Patients present loss of eyebrows and eyelashes in childhood and have a predisposition to develop malignancies.","definition_xrefs":["Orphanet:363618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature aging syndrome","termid":"MONDO:0019303"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0005267"],"is_obsolete":false,"name":"LMNA-related cardiocutaneous progeria syndrome","secondary_identifiers":["MEDGEN:1667690","UMLS:C4750858","GARD:21555"],"synonyms":[{"name":"LCPS","type":"exact"}],"termid":"MONDO:0018203","xrefs":{"Monarch":{"xref_id":"0018203"}}}


id: PBO:0052678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 46","termid":"PBO:0052678"}


id: PBO:0038690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 1","termid":"PBO:0038690"}


id: PBO:0091420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD binding dehydrogenase family protein, human DHDH ortholog, unknown biological role, implicated in carbohydrate metabolic process","termid":"PBO:0091420"}


id: PBO:0072284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 2","termid":"PBO:0072284"}


id: GO:0032076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of deoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nuclease activity","termid":"GO:0032074"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of deoxyribonuclease activity","synonyms":[{"name":"DNase inhibitor","type":"related"},{"name":"deoxyribonuclease inhibitor","type":"related"},{"name":"down regulation of deoxyribonuclease activity","type":"exact"},{"name":"down-regulation of deoxyribonuclease activity","type":"exact"},{"name":"downregulation of deoxyribonuclease activity","type":"exact"},{"name":"inhibition of deoxyribonuclease activity","type":"narrow"}],"termid":"GO:0032076"}


id: PBO:0069506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 774, pseudogene","termid":"PBO:0069506"}


id: GO:0050933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an early stripe melanocyte (ESM). In zebrafish, ESMs develop during the first phase (2-3 weeks of development) of the larva to adult transition (2-4 weeks of development).","definition_xrefs":["PMID:11858836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocyte differentiation","termid":"GO:0030318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"early stripe melanocyte differentiation","synonyms":[{"name":"early stripe melanocyte cell differentiation","type":"exact"},{"name":"early stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050933"}


id: PBO:0003631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 protease Nep2","termid":"PBO:0003631"}


id: GO:0061791
data:
  {"annotated_genes":["SJAG_02384","SJAG_00031","SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105009],"is_not":false,"summary":null,"term":"GO:0061791"},{"annotations":[100302,103112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990606"}]},"cv_name":"molecular_function","definition":"A motor activity driven by GTP hydrolysis.","definition_xrefs":["GOC:vw","PMID:11242086","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor activity","termid":"GO:0003774"},{"relation_name":"is_a","term_name":"GTPase activity","termid":"GO:0003924"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_02384":null,"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003924"},{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003924","GO:0003824","GO:0016787","GO:0003774"],"is_obsolete":false,"name":"GTPase motor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061791","terms_by_termid":{"GO:0061791":null,"GO:1990606":null}}


id: GO:0052054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of host protease activity, the catalysis of the hydrolysis of peptide bonds in a protein. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host peptidase activity (obsolete GO:0052054)","synonyms":[{"name":"down regulation by symbiont of host protease activity","type":"narrow"},{"name":"down-regulation by symbiont of host protease activity","type":"narrow"},{"name":"downregulation by symbiont of host protease activity","type":"narrow"},{"name":"inhibition by symbiont of host protease activity","type":"narrow"},{"name":"inhibition of host protease activity","type":"narrow"},{"name":"negative regulation by symbiont of host protease activity","type":"narrow"}],"termid":"GO:0052054"}


id: PBO:0025507
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperprolinemia","termid":"PBO:0025507"}


id: GO:1904385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an angiotensin stimulus. Angiotensin is any of three physiologically active peptides (angiotensin II, III, or IV) processed from angiotensinogen.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:22982863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"},{"relation_name":"is_a","term_name":"response to angiotensin","termid":"GO:1990776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to angiotensin","termid":"GO:1904385"}


id: FYPO:0004549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the S-phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint during cellular response to UV","termid":"FYPO:0002102"},{"relation_name":"is_a","term_name":"normal S-phase DNA damage checkpoint","termid":"FYPO:0003530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002","FYPO:0001312","FYPO:0000631","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal S-phase DNA damage checkpoint during cellular response to UV","synonyms":[{"name":"normal S-phase DNA damage checkpoint activation during cellular response to UV","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to UV during mitotic cell cycle","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal S-phase DNA damage checkpoint during cellular response to ultraviolet light","type":"exact"},{"name":"normal intra-S phase DNA damage checkpoint during cellular response to UV","type":"exact"},{"name":"normal mitotic S-phase DNA damage checkpoint during cellular response to UV","type":"exact"}],"termid":"FYPO:0004549"}


id: PBO:0087318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methylmethionine-homocysteine methyltransferase; functions along with Sam4p in the conversion of S-adenosylmethionine (AdoMet) to methionine to control the methionine/AdoMet ratio","termid":"PBO:0087318"}


id: PBO:0046286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 4","termid":"PBO:0046286"}


id: PBO:0056056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumican","termid":"PBO:0056056"}


id: PBO:0040701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2L1 antisense RNA 1","termid":"PBO:0040701"}


id: PBO:0045445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPYD antisense RNA 1","termid":"PBO:0045445"}


id: GO:0018816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxyisobutyrate = H2O + methacrylate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxyisobutyrate dehydratase activity (obsolete GO:0018816)","termid":"GO:0018816"}


id: GO:0043668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer layer of the pollen grain wall which is composed primarily of sporopollenin.","direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"pollen wall","termid":"GO:0043667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"exine","termid":"GO:0043668"}


id: PBO:0071784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 12","termid":"PBO:0071784"}


id: PBO:0060998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHL repeat containing 3","termid":"PBO:0060998"}


id: MONDO:0019118
data:
  {"annotated_genes":["SJAG_01356","SJAG_02885","SJAG_02623","SJAG_03827","SJAG_02889","SJAG_04334","SJAG_00737","SJAG_01526","SJAG_04529","SJAG_01634","SJAG_02947","SJAG_01152","SJAG_01422","SJAG_05342","SJAG_03557","SJAG_04497","SJAG_03588","SJAG_01897","SJAG_00495","SJAG_02150","SJAG_00643","SJAG_04495","SJAG_02712","SJAG_01756","SJAG_03258","SJAG_02295","SJAG_03592","SJAG_01630","SJAG_04681","SJAG_01298","SJAG_02063","SJAG_04225","SJAG_04637","SJAG_04003","SJAG_01998","SJAG_04745","SJAG_02163","SJAG_02946","SJAG_02955","SJAG_04296","SJAG_00531","SJAG_03795","SJAG_00742"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87617,87618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012419"},{"annotations":[86933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012099"},{"annotations":[87256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010557"},{"annotations":[86767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014372"},{"annotations":[85422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014669"},{"annotations":[86778,86779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013802"},{"annotations":[87239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013454"},{"annotations":[85783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012990"},{"annotations":[87292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032794"},{"annotations":[85960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012056"},{"annotations":[85440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0060650"},{"annotations":[87586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009624"},{"annotations":[86808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007918"},{"annotations":[87392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009796"},{"annotations":[86657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008379"},{"annotations":[86406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010828"},{"annotations":[86546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010806"},{"annotations":[86462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011075"},{"annotations":[87510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010723"},{"annotations":[87005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012363"},{"annotations":[85403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012477"},{"annotations":[87088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013468"},{"annotations":[85801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013516"},{"annotations":[86179,86178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013611"},{"annotations":[86163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014256"},{"annotations":[86923,86930,86929,86924,86926,86922,86925,86927,86928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014323"},{"annotations":[86610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014400"},{"annotations":[87164],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015013"},{"annotations":[87044,87043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044320"},{"annotations":[86572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032604"},{"annotations":[85912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031007"},{"annotations":[86433,86434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010819"}]},"cv_name":"mondo","definition":"An instance of retinal degeneration that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration","termid":"MONDO:0004580"},{"relation_name":"is_a","term_name":"perceptual disorders","termid":"MONDO:0024417"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_00531":null,"SJAG_00643":null,"SJAG_00737":null,"SJAG_00742":null,"SJAG_01152":null,"SJAG_01298":null,"SJAG_01356":null,"SJAG_01422":null,"SJAG_01526":null,"SJAG_01630":null,"SJAG_01634":null,"SJAG_01756":null,"SJAG_01897":null,"SJAG_01998":null,"SJAG_02063":null,"SJAG_02150":null,"SJAG_02163":null,"SJAG_02295":null,"SJAG_02623":null,"SJAG_02712":null,"SJAG_02885":null,"SJAG_02889":null,"SJAG_02946":null,"SJAG_02947":null,"SJAG_02955":null,"SJAG_03258":null,"SJAG_03557":null,"SJAG_03588":null,"SJAG_03592":null,"SJAG_03795":null,"SJAG_03827":null,"SJAG_04003":null,"SJAG_04225":null,"SJAG_04296":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04637":null,"SJAG_04681":null,"SJAG_04745":null,"SJAG_05342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"inherited retinal dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:8501","ICD9:362.7","SCTID:41799005","GARD:18916","NCIT:C35625","Orphanet:71862","DOID:8500","UMLS:C0854723","ICD10CM:H35.5","MEDGEN:208903","ICD9:362.72","MedDRA:10038857","NCIT:C35194","SCTID:314407005","MESH:D058499","ICD9:362.70","ICD9:362.75","HP:0000556"],"synonyms":[{"name":"familial retinal dystrophy","type":"exact"},{"name":"fundus dystrophy","type":"broad"},{"name":"genetic retinal dystrophy","type":"exact"},{"name":"hereditary retinal degeneration","type":"exact"},{"name":"hereditary retinal dystrophy","type":"exact"},{"name":"inherited retinal dystrophy","type":"exact"},{"name":"retinal dystrophy","type":"exact"}],"termid":"MONDO:0019118","terms_by_termid":{"MONDO:0007918":null,"MONDO:0008379":null,"MONDO:0009624":null,"MONDO:0009796":null,"MONDO:0010557":null,"MONDO:0010723":null,"MONDO:0010806":null,"MONDO:0010819":null,"MONDO:0010828":null,"MONDO:0011075":null,"MONDO:0012056":null,"MONDO:0012099":null,"MONDO:0012363":null,"MONDO:0012419":null,"MONDO:0012477":null,"MONDO:0012990":null,"MONDO:0013454":null,"MONDO:0013468":null,"MONDO:0013516":null,"MONDO:0013611":null,"MONDO:0013802":null,"MONDO:0014256":null,"MONDO:0014323":null,"MONDO:0014372":null,"MONDO:0014400":null,"MONDO:0014669":null,"MONDO:0015013":null,"MONDO:0031007":null,"MONDO:0032604":null,"MONDO:0032794":null,"MONDO:0044320":null,"MONDO:0060650":null},"xrefs":{"Monarch":{"xref_id":"0019118"}}}


id: GO:0035481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to heart induction.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Notch signaling pathway involved in heart induction (obsolete GO:0035481)","synonyms":[{"name":"positive regulation of Notch signalling pathway involved in heart induction","type":"exact"}],"termid":"GO:0035481"}


id: MONDO:1012498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary open angle glaucoma, non-human animal","termid":"MONDO:1011998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary open angle glaucoma, dog","secondary_identifiers":["OMIA:002046-9615"],"termid":"MONDO:1012498","xrefs":{"Monarch":{"xref_id":"1012498"}}}


id: MONDO:0017059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease that has its basis in the disruption of neural tube closure.","definition_xrefs":["MONDO:design_pattern"],"gene_count":0,"genotype_count":0,"name":"obsolete neural tube closure defect (obsolete MONDO:0017059)","secondary_identifiers":["Orphanet:268357"],"synonyms":[{"name":"disorder of neural tube closure","type":"exact"},{"name":"neural tube closure disease","type":"exact"}],"termid":"MONDO:0017059","xrefs":{"Monarch":{"xref_id":"0017059"}}}


id: PBO:0054300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1691","termid":"PBO:0054300"}


id: GO:0090558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the plant epidermis over time, from its formation to the mature structure.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant epidermis development","termid":"GO:0090558"}


id: PBO:0001720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk6 (predicted)","termid":"PBO:0001720"}


id: PBO:0044836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 124","termid":"PBO:0044836"}


id: MONDO:0700256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any type 1 interferonopathies in which the cause of the disease is a variation in the TREX1 gene. Individuals with variants in TREX1 can present with a variety of phenotypes, including Aicardi-Goutieres syndrome, chilblain lupus, or retinal vasculopathy with cerebral leukoencephalopathy and systemic manifestations.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy","termid":"MONDO:0700264"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX1-related type 1 interferonopathy","termid":"MONDO:0700256","xrefs":{"Monarch":{"xref_id":"0700256"}}}


id: PBO:0048748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine-N-acyltransferase like 1 pseudogene 1","termid":"PBO:0048748"}


id: PBO:0073506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 1B","termid":"PBO:0073506"}


id: MOD:01283
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["PubMed:15541752","Unimod:206#K","PubMed:10825247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrolein addition +56","termid":"MOD:00557"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrolein addition +56 - site K","synonyms":[{"name":"Acrolein addition +56","type":"related"},{"name":"Delta:H(4)C(3)O(1)","type":"related"}],"termid":"MOD:01283"}


id: GO:2001072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to galactomannan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heteropolysaccharide binding","termid":"GO:0010297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"galactomannan binding","termid":"GO:2001072"}


id: PATO:0001611
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits color variation or change.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of color","termid":"PATO:0001611"}


id: MONDO:0006770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare tumor-like lesion of the hands and feet characterized by the presence of hemorrhagic fibrous tissue, hemosiderin deposition, osteoclast-like giant cells which are irregularly distributed, and reactive bone formation. Pain and swelling are the most frequent symptoms. It may recur following curettage, but is usually cured after a second procedure.","definition_xrefs":["NCIT:C121893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone giant cell tumor","termid":"MONDO:0005674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"giant cell reparative granuloma","secondary_identifiers":["ICD9:526.3","MEDGEN:102385","EFO:1000950","SCTID:15350006","MESH:D006101","UMLS:C0162375","DOID:1866"],"synonyms":[{"name":"GCLSB","type":"exact"},{"name":"central giant cell (reparative) granuloma","type":"exact"},{"name":"central giant cell granuloma","type":"exact"},{"name":"central giant cell reparative granuloma of jaw","type":"exact"},{"name":"giant cell lesion of small bones","type":"exact"}],"termid":"MONDO:0006770","xrefs":{"Monarch":{"xref_id":"0006770"}}}


id: MONDO:0024421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature contractures hypotonia","synonyms":[{"name":"Hennekam Koss de Geest syndrome","type":"related"}],"termid":"MONDO:0024421","xrefs":{"Monarch":{"xref_id":"0024421"}}}


id: GO:0033152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immunoglobulin gene segments are recombined within a single locus utilizing the conserved heptamer and nonomer recombination signal sequences (RSS). For immunoglobulin heavy chains V, D, and J gene segments are joined, and for immunoglobulin light chains V and J gene segments are joined.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic recombination of immunoglobulin gene segments","termid":"GO:0016447"},{"relation_name":"is_a","term_name":"V(D)J recombination","termid":"GO:0033151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0010467","GO:0006310"],"is_obsolete":false,"name":"immunoglobulin V(D)J recombination","synonyms":[{"name":"immunoglobulin V(D)J joining","type":"exact"},{"name":"immunoglobulin V-D-J joining","type":"narrow"},{"name":"immunoglobulin V-D-J recombination","type":"narrow"},{"name":"immunoglobulin V-J joining","type":"narrow"},{"name":"immunoglobulin V-J recombination","type":"narrow"}],"termid":"GO:0033152"}


id: GO:0018283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of iron into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"},{"relation_name":"is_a","term_name":"metal incorporation into metallo-sulfur cluster","termid":"GO:0018282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016226","GO:0044085"],"is_obsolete":false,"name":"iron incorporation into metallo-sulfur cluster","synonyms":[{"name":"iron incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018283"}


id: PBO:0082390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta-isopropylmalate dehydrogenase (IMDH); catalyzes the third step in the leucine biosynthesis pathway; can additionally catalyze the conversion of beta-ethylmalate into alpha-ketovalerate","termid":"PBO:0082390"}


id: PBO:0049931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHATL antisense RNA 1","termid":"PBO:0049931"}


id: PBO:0077310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 47","termid":"PBO:0077310"}


id: PBO:0004107
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"region specific activator of recombination","termid":"PBO:0004107"}


id: PBO:0036146
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_sumoylation_during_vegetative_growth","termid":"PBO:0036146"}


id: PBO:0075137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide A'","termid":"PBO:0075137"}


id: PBO:0081332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF132 divergent transcript","termid":"PBO:0081332"}


id: PBO:0073264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 8","termid":"PBO:0073264"}


id: MONDO:0008633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intermediate form of cryopyrin-associated periodic syndrome (CAPS) and is characterized by recurrent fever (with malaise and chills), recurrent urticaria-like skin rash, sensorineural deafness, general signs of inflammation (eye redness, headaches, arthralgia/myalgia) and potentially life-threatening secondary amyloidosis (AA type).","definition_xrefs":["Orphanet:575"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"cryopyrin-associated periodic syndrome","termid":"MONDO:0016168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0000426"],"is_obsolete":false,"name":"Muckle-Wells syndrome","secondary_identifiers":["DOID:0050854","MedDRA:10064569","NANDO:2201067","GARD:8472","icd11.foundation:1983358487","NANDO:1200467","OMIM:191900","ICD9:708.8","MEDGEN:120634","NCIT:C119054","SCTID:402417009","UMLS:C0268390"],"synonyms":[{"name":"Cryopyrin-associated periodic syndrome 2","type":"related"},{"name":"MUCKLE-Wells syndrome","type":"related"},{"name":"MWS","type":"related"},{"name":"Muckle Wells syndrome","type":"related"},{"name":"Muckle-Wells syndrome","type":"exact"},{"name":"Uda syndrome","type":"related"},{"name":"neutrophilic urticaria","type":"exact"},{"name":"urticaria, deafness and amyloidosis","type":"related"},{"name":"urticaria-deafness-amyloidosis syndrome","type":"related"}],"termid":"MONDO:0008633","xrefs":{"Monarch":{"xref_id":"0008633"}}}


id: PBO:0060766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 10","termid":"PBO:0060766"}


id: PBO:0001743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fusion and transport protein Ugo1 (predicted)","termid":"PBO:0001743"}


id: FYPO:0007518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of DNA damage occurring as a side effect of transcription in a cell is greater than normal. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PMID:33153481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage during vegetative growth","termid":"FYPO:0003547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased transcription-induced DNA damage","synonyms":[{"name":"increased DNA damage by transcription","type":"exact"},{"name":"increased transcription-induced DNA damage during mitotic cell cycle","type":"related"},{"name":"increased transcription-induced DNA damage during vegetative growth","type":"exact"}],"termid":"FYPO:0007518"}


id: GO:0018941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving organomercury compound, any organic compound containing a mercury atom.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete organomercury metabolic process (obsolete GO:0018941)","synonyms":[{"name":"organomercury metabolism","type":"exact"}],"termid":"GO:0018941"}


id: GO:0048768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Localized growth of a plant root hair tip by extension of the cell wall.","definition_xrefs":["GOC:ki","GOC:jid","PMID:12468740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell tip growth","termid":"GO:0009932"},{"relation_name":"part_of","term_name":"root hair elongation","termid":"GO:0048767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root hair cell tip growth","synonyms":[{"name":"root hair tip growth","type":"exact"}],"termid":"GO:0048768"}


id: MONDO:0004445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of bladder adenocarcinoma characterized by the presence of malignant glandular epithelial cells and clear cells forming a papillary pattern.","definition_xrefs":["NCIT:C39848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder clear cell adenocarcinoma","termid":"MONDO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder papillary clear cell adenocarcinoma","secondary_identifiers":["UMLS:C1511196","DOID:8051","MEDGEN:307286"],"synonyms":[{"name":"bladder papillary clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0004445","xrefs":{"Monarch":{"xref_id":"0004445"}}}


id: GO:0014061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of norepinephrine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine secretion","termid":"GO:0050433"},{"relation_name":"regulates","term_name":"norepinephrine secretion","termid":"GO:0048243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of norepinephrine secretion","synonyms":[{"name":"regulation of noradrenaline secretion","type":"exact"}],"termid":"GO:0014061"}


id: PBO:0075657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin alpha, non-erythrocytic 1","termid":"PBO:0075657"}


id: MONDO:0005307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Prolonged shortening of the muscle or other soft tissue around a joint, preventing movement of the joint.","definition_xrefs":["MESH:D003286"],"gene_count":0,"genotype_count":0,"name":"obsolete contracture (obsolete MONDO:0005307)","synonyms":[{"name":"muscle contracture","type":"narrow"}],"termid":"MONDO:0005307","xrefs":{"Monarch":{"xref_id":"0005307"}}}


id: MONDO:0021239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the urethra.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethral disorder","termid":"MONDO:0004184"},{"relation_name":"is_a","term_name":"urinary system neoplasm","termid":"MONDO:0021066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethra neoplasm","secondary_identifiers":["NCIT:C3428","UMLS:C0041971","EFO:0003846","MEDGEN:12014"],"synonyms":[{"name":"neoplasm of the urethra","type":"exact"},{"name":"neoplasm of urethra","type":"exact"},{"name":"neoplasms. urethra","type":"exact"},{"name":"tumor of the urethra","type":"exact"},{"name":"tumor of urethra","type":"exact"},{"name":"tumors. urethra","type":"exact"},{"name":"tumour of the urethra","type":"exact"},{"name":"tumour of urethra","type":"exact"},{"name":"urethra neoplasm (disease)","type":"exact"},{"name":"urethra neoplasms","type":"exact"},{"name":"urethra tumor","type":"exact"},{"name":"urethra tumors","type":"exact"},{"name":"urethra tumour","type":"exact"},{"name":"urethra tumours","type":"exact"},{"name":"urethral neoplasm","type":"exact"},{"name":"urethral neoplasms","type":"exact"},{"name":"urethral tumor","type":"exact"},{"name":"urethral tumors","type":"exact"},{"name":"urethral tumour","type":"exact"},{"name":"urethral tumours","type":"exact"}],"termid":"MONDO:0021239","xrefs":{"Monarch":{"xref_id":"0021239"}}}


id: GO:0062143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-propargylglycine (Pra). L-propargylglycine is an antibiotic produced by Streptomyces bacteria.","definition_xrefs":["PMID:30867596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal acetylenic compound biosynthetic process","termid":"GO:0120237"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-propargylglycine biosynthetic process","termid":"GO:0062143"}


id: PBO:0083456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene HAC1/YFL031W; YFL032W is not an essential gene","termid":"PBO:0083456"}


id: MONDO:0013072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant Emery-Dreifuss muscular dystrophy in which the cause of the disease is a mutation in the SYNE2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Emery-Dreifuss muscular dystrophy","termid":"MONDO:0020336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"Emery-Dreifuss muscular dystrophy 5, autosomal dominant","secondary_identifiers":["MEDGEN:414111","UMLS:C2751805","DOID:0070250","OMIM:612999","GARD:18207"],"synonyms":[{"name":"EDMD5","type":"related"},{"name":"EMERY-Dreifuss muscular dystrophy 5, autosomal dominant","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 5, autosomal dominant","type":"exact"},{"name":"SYNE2 autosomal dominant Emery-Dreifuss muscular dystrophy","type":"exact"},{"name":"autosomal dominant Emery-Dreifuss muscular dystrophy caused by mutation in SYNE2","type":"exact"}],"termid":"MONDO:0013072","xrefs":{"Monarch":{"xref_id":"0013072"}}}


id: PBO:0059814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 40","termid":"PBO:0059814"}


id: PBO:0002517
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.33","termid":"PBO:0002517"}


id: PBO:0074846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 36C","termid":"PBO:0074846"}


id: PBO:0077834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP73 antisense RNA 2","termid":"PBO:0077834"}


id: MONDO:0004848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the mouth mucosa associated with the presence of ulcers.","definition_xrefs":["NCIT:C35039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomatitis","termid":"MONDO:0004842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulcerative stomatitis","secondary_identifiers":["SCTID:450005","ICD9:528.00","DOID:9673","MEDGEN:21335","MESH:D005892","UMLS:C0038367"],"synonyms":[{"name":"ulcerative stomatitis","type":"exact"}],"termid":"MONDO:0004848","xrefs":{"Monarch":{"xref_id":"0004848"}}}


id: MONDO:0013655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the GRIN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 8","secondary_identifiers":["MEDGEN:481912","OMIM:614254","DOID:0070038","GARD:13686","UMLS:C3280282"],"synonyms":[{"name":"GRIN1 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD8","type":"exact"},{"name":"NDHMSD","type":"related"},{"name":"autosomal dominant intellectual disability 8","type":"exact"},{"name":"autosomal dominant mental retardation 8","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 8","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in GRIN1","type":"exact"},{"name":"intellectual disability, autosomal dominant 8","type":"exact"},{"name":"intellectual disability, autosomal dominant 8, formerly","type":"related"},{"name":"intellectual disability, autosomal dominant type 8","type":"exact"},{"name":"mental retardation, autosomal dominant 8","type":"related"},{"name":"mental retardation, autosomal dominant 8, formerly","type":"related"},{"name":"mental retardation, autosomal dominant type 8","type":"exact"},{"name":"neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal dominant","type":"related"}],"termid":"MONDO:0013655","xrefs":{"Monarch":{"xref_id":"0013655"}}}


id: MONDO:0016964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 14","secondary_identifiers":["MEDGEN:1826036","Orphanet:262941","UMLS:C5679704","GARD:20884"],"synonyms":[{"name":"14q duplication","type":"related"},{"name":"14q trisomy","type":"related"},{"name":"Duplication 14q","type":"related"},{"name":"chromosome 14q duplication","type":"related"},{"name":"partial duplication of chromosome 14q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 14","type":"exact"},{"name":"partial trisomy 14q","type":"related"},{"name":"partial trisomy of chromosome 14q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 14","type":"exact"},{"name":"trisomy 14q","type":"related"}],"termid":"MONDO:0016964","xrefs":{"Monarch":{"xref_id":"0016964"}}}


id: PBO:0053781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1031","termid":"PBO:0053781"}


id: PBO:0057121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 205","termid":"PBO:0057121"}


id: PBO:0056191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGEA3 divergent transcript","termid":"PBO:0056191"}


id: MONDO:0011539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amish nemaline myopathy is a type of nemaline myopathy (NM) only observed in several families of the Amish community.","definition_xrefs":["Orphanet:98902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nemaline myopathy","termid":"MONDO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"nemaline myopathy 5","secondary_identifiers":["MESH:C538397","DOID:0110936","MEDGEN:344273","OMIM:605355","GARD:8334","UMLS:C1854380"],"synonyms":[{"name":"ANM","type":"exact"},{"name":"Amish nemaline myopathy","type":"exact"},{"name":"NEM5","type":"exact"},{"name":"TNNT1 nemaline myopathy","type":"exact"},{"name":"nemaline myopathy 5","type":"exact"},{"name":"nemaline myopathy 5, Amish type","type":"exact"},{"name":"nemaline myopathy caused by mutation in TNNT1","type":"exact"},{"name":"nemaline myopathy type 5","type":"exact"},{"name":"nemaline myopathy, Amish type","type":"related"},{"name":"nemaline myopathy, caused by mutation in the troponin t1 gene","type":"related"}],"termid":"MONDO:0011539","xrefs":{"Monarch":{"xref_id":"0011539"}}}


id: PATO:0001224
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001224 real number (obsolete PATO:0001224)","termid":"PATO:0001224"}


id: PBO:0114218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis RNA-binding protein Nop8","termid":"PBO:0114218"}


id: PBO:0061958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 14","termid":"PBO:0061958"}


id: MONDO:0800034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any MELAS syndromein which the cause of the disease is a mutation in the MTTH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MELAS syndrome","termid":"MONDO:0010789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"MELAS syndrome caused by mutation in MTTH","synonyms":[{"name":"MTTH MELAS syndrome","type":"exact"}],"termid":"MONDO:0800034","xrefs":{"Monarch":{"xref_id":"0800034"}}}


id: MONDO:0054741
data:
  {"annotated_genes":["SJAG_00513"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85437],"is_not":false,"summary":null,"term":"MONDO:0054741"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00513":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 34","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1631307","OMIM:617872","Orphanet:457223","UMLS:C4693450","DOID:0111497","GARD:17799"],"synonyms":[{"name":"COXPD34","type":"related"},{"name":"combined oxidative phosphorylation deficiency 34","type":"exact"},{"name":"syndromic sensorineural deafness due to COXPD","type":"exact"},{"name":"syndromic sensorineural deafness due to combined oxidative phosphorylation defect","type":"exact"},{"name":"syndromic sensorineural hearing loss due to COXPD","type":"exact"}],"termid":"MONDO:0054741","terms_by_termid":{"MONDO:0054741":null},"xrefs":{"Monarch":{"xref_id":"0054741"}}}


id: SO:1000086
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variation that causes a decrease in the level of mature, spliced and processed RNA, resulting from a change in the corresponding DNA sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000086 sequence_variation_decreasing_level_of_transcript (obsolete SO:1000086)","synonyms":[{"name":"mutation decreasing level of transcript","type":"exact"},{"name":"sequence variation decreasing level of transcript","type":"related"}],"termid":"SO:1000086"}


id: PBO:0059635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 1","termid":"PBO:0059635"}


id: GO:2000279
data:
  {"annotated_genes":["SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of DNA biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"is_a","term_name":"regulation of DNA biosynthetic process","termid":"GO:2000278"},{"relation_name":"negatively_regulates","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00573":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of DNA anabolism","type":"exact"},{"name":"negative regulation of DNA biosynthesis","type":"exact"},{"name":"negative regulation of DNA formation","type":"exact"},{"name":"negative regulation of DNA synthesis","type":"exact"}],"termid":"GO:2000279","terms_by_termid":{"GO:1904332":null}}


id: PBO:0053419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 359","termid":"PBO:0053419"}


id: GO:0018047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-phenylalanine amide by hydrolysis and oxidation of an interior Phe-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0094"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-phenylalanine amidation (obsolete GO:0018047)","termid":"GO:0018047"}


id: GO:0004731
data:
  {"annotated_genes":["SJAG_01359","SJAG_03881"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79416],"is_not":false,"summary":null,"term":"GO:0004731"},{"annotations":[78209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017061"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.","definition_xrefs":["EC:2.4.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01359":null,"SJAG_03881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"purine-nucleoside phosphorylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9735789","Reactome:R-HSA-112033","Reactome:R-HSA-9755044","RHEA:19805","Reactome:R-HSA-9735775","Reactome:R-HSA-112034","Reactome:R-HSA-74242","Reactome:R-HSA-74249","MetaCyc:PNP-RXN"],"synonyms":[{"name":"PNPase activity","type":"related"},{"name":"PUNPI","type":"related"},{"name":"PUNPII","type":"related"},{"name":"inosine phosphorylase activity","type":"narrow"},{"name":"inosine-guanosine phosphorylase activity","type":"related"},{"name":"purine deoxynucleoside phosphorylase activity","type":"related"},{"name":"purine deoxyribonucleoside phosphorylase activity","type":"related"},{"name":"purine nucleoside phosphorylase activity","type":"related"},{"name":"purine ribonucleoside phosphorylase activity","type":"related"},{"name":"purine-nucleoside:phosphate ribosyltransferase activity","type":"related"}],"termid":"GO:0004731","terms_by_termid":{"GO:0004731":null,"GO:0017061":null}}


id: GO:0019563
data:
  {"annotated_genes":["SJAG_04320","SJAG_04192","SJAG_04048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72471,78972],"is_not":false,"summary":null,"term":"GO:0019563"},{"annotations":[88928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[88929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol metabolic process","termid":"GO:0006071"},{"relation_name":"is_a","term_name":"alditol catabolic process","termid":"GO:0019405"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"glycerol catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLYCEROL-DEG"],"synonyms":[{"name":"glycerol breakdown","type":"exact"},{"name":"glycerol catabolism","type":"exact"},{"name":"glycerol degradation","type":"exact"}],"termid":"GO:0019563","terms_by_termid":{"GO:0019563":null,"GO:0019564":null,"GO:0061613":null}}


id: GO:0035405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of a phosphate group to a threonine residue.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone-threonine phosphorylation (obsolete GO:0035405)","synonyms":[{"name":"histone threonine phosphorylation","type":"exact"}],"termid":"GO:0035405"}


id: MONDO:0003478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma that arises from the central nervous system and occurs during childhood.","definition_xrefs":["NCIT:C8578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood ependymoma","secondary_identifiers":["MEDGEN:343609","MESH:C531673","UMLS:C1851584","DOID:5509"],"synonyms":[{"name":"childhood ependymoma","type":"exact"},{"name":"ependymoma","type":"broad"},{"name":"ependymoma of childhood","type":"exact"},{"name":"paediatric ependymoma","type":"exact"},{"name":"pediatric ependymoma","type":"exact"}],"termid":"MONDO:0003478","xrefs":{"Monarch":{"xref_id":"0003478"}}}


id: PBO:0064341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin domain containing 1","termid":"PBO:0064341"}


id: GO:0071572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of an acetyl group from lysine at position 56 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K56 deacetylation (obsolete GO:0071572)","termid":"GO:0071572"}


id: PBO:0091862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4504 family protein, human C1orf74 ortholog","termid":"PBO:0091862"}


id: PBO:0045728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 7","termid":"PBO:0045728"}


id: PBO:0086693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; induced in respiratory-deficient cells","termid":"PBO:0086693"}


id: PBO:0070031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1328, pseudogene","termid":"PBO:0070031"}


id: PBO:0049142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 1","termid":"PBO:0049142"}


id: GO:0051056
data:
  {"annotated_genes":["SJAG_03353","SJAG_00883","SJAG_00078","SJAG_03048","SJAG_04943","SJAG_01790","SJAG_04455","SJAG_03681","SJAG_01464","SJAG_02379","SJAG_04462","SJAG_01386","SJAG_03508","SJAG_00526","SJAG_06270","SJAG_00229","SJAG_02514","SJAG_04329","SJAG_03488","SJAG_03936","SJAG_03592","SJAG_00082","SJAG_00600","SJAG_01805","SJAG_02169","SJAG_04776","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[71938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[107903,116291,110540,73135,93787,107594,93258,91052,93173,99925,105396,107460,92061,95971,101612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[90326,102726,110898,87857,94137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[70293,75248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032483"},{"annotations":[90288,104848,113751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031029"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of small GTPase mediated signal transduction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00082":null,"SJAG_00229":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02379":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03488":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03936":null,"SJAG_04329":null,"SJAG_04455":null,"SJAG_04462":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of small GTPase mediated signal transduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9012999"],"synonyms":[{"name":"regulation of small GTPase-mediated signal transduction","type":"exact"}],"termid":"GO:0051056","terms_by_termid":{"GO:0031029":null,"GO:0031030":null,"GO:0031031":null,"GO:0032483":null,"GO:0035024":null,"GO:0046580":null}}


id: PBO:0070235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 173 pseudogene","termid":"PBO:0070235"}


id: PBO:0083447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene BNA5","termid":"PBO:0083447"}


id: MONDO:0003633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term describing a malignant soft tissue tumor which consists of two or more mesenchymal lines of differentiation, excluding a fibroblastic line of differentiation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"mesenchymoma","termid":"MONDO:0006854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant mesenchymoma","secondary_identifiers":["UMLS:C0334492","ICDO:8990/3","NCIT:C4268","MEDGEN:87252","DOID:5758"],"synonyms":[{"name":"mesenchymoma, malignant","type":"exact"},{"name":"mesenchymoma, malignant (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003633","xrefs":{"Monarch":{"xref_id":"0003633"}}}


id: MONDO:0004597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized necrosis of lung tissue caused by obstruction of the arterial blood supply, most often due to pulmonary embolism.","definition_xrefs":["NCIT:C50714"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete acute pulmonary heart disease (obsolete MONDO:0004595)","termid":"MONDO:0004595"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary embolism and infarction","secondary_identifiers":["ICD9:415.1","ICD9:415.19","UMLS:C0034074","MEDGEN:19577","MESH:D054060","SCTID:64662007","DOID:8516"],"synonyms":[{"name":"infarction, pulmonary","type":"exact"},{"name":"lung infarction","type":"related"},{"name":"pulmonary infarction","type":"related"}],"termid":"MONDO:0004597","xrefs":{"Monarch":{"xref_id":"0004597"}}}


id: MONDO:0010826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A familial generalized pediatric epilepsy, characterized by very frequent (multiple per day) absence seizures, usually occurring in children between the ages of 4 and 10 years, with, in most cases, a good prognosis.","definition_xrefs":["Orphanet:64280"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete absence epilepsy (obsolete MONDO:0850093)","termid":"MONDO:0850093"},{"relation_name":"is_a","term_name":"childhood-onset idiopathic generalized epilepsy syndrome","termid":"MONDO:0800499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"childhood absence epilepsy","secondary_identifiers":["icd11.foundation:726403046","DOID:1825","MEDGEN:924120","SCTID:50866000","DOID:0050708","SCTID:230413002","UMLS:C4281785","GARD:16667","OMIMPS:600131"],"synonyms":[{"name":"absence seizure","type":"related"},{"name":"early onset absence epilepsy","type":"exact"},{"name":"petit mal seizure","type":"related"},{"name":"pyknolepsy","type":"exact"}],"termid":"MONDO:0010826","xrefs":{"Monarch":{"xref_id":"0010826"}}}


id: PBO:0060691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A2","termid":"PBO:0060691"}


id: GO:0010703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency or extent of the breakdown of tissues; usually, if not always, accompanied by cell death.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histolysis (obsolete GO:0010703)","synonyms":[{"name":"down regulation of histolysis","type":"exact"},{"name":"down-regulation of histolysis","type":"exact"},{"name":"downregulation of histolysis","type":"exact"},{"name":"inhibition of histolysis","type":"narrow"}],"termid":"GO:0010703"}


id: GO:0097455
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Paranodal terminations of Schwann cells that do not directly contact the paranodal axon membrane. Usually found in thicker myelin.","definition_xrefs":["PMID:15988042","NIF_Subcellular:sao937871668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell projection","termid":"GO:0097386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spiny bracelet of Nageotte","termid":"GO:0097455"}


id: PBO:0047710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 1","termid":"PBO:0047710"}


id: PBO:0042752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein V like 2","termid":"PBO:0042752"}


id: FYPO:0003837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of RNA polymerase II carboxy-terminal domain kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased RNA polymerase II carboxy-terminal domain kinase activity","termid":"FYPO:0003837"}


id: GO:1901090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein tetramerization.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein oligomerization","termid":"GO:0032459"},{"relation_name":"regulates","term_name":"protein tetramerization","termid":"GO:0051262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"regulation of protein tetramerization","synonyms":[{"name":"regulation of protein tetramer assembly","type":"exact"},{"name":"regulation of protein tetramer biosynthesis","type":"exact"},{"name":"regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"regulation of protein tetramer formation","type":"exact"}],"termid":"GO:1901090"}


id: FYECO:0000277
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which bleomycin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ bleomycin","termid":"FYECO:0000277"}


id: MONDO:0023642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular motility disease","termid":"MONDO:0001584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weber syndrome","secondary_identifiers":["UMLS:C0455717","MEDGEN:96812","SCTID:24654003","icd11.foundation:1609214113","ICD9:344.89","GARD:8676"],"synonyms":[{"name":"Midbrain stroke syndromes","type":"related"},{"name":"Weber Syndrome","type":"related"},{"name":"Weber-Gubler syndrome","type":"exact"}],"termid":"MONDO:0023642","xrefs":{"Monarch":{"xref_id":"0023642"}}}


id: SO:0100011
data:
  {"annotated_genes":["SJAG_00481","SJAG_00367","SJAG_04184","SJAG_00790","SJAG_00570","SJAG_01948","SJAG_00780","SJAG_04789","SJAG_02102","SJAG_03606","SJAG_04786","SJAG_04922","SJAG_03057","SJAG_02489","SJAG_02580","SJAG_05189","SJAG_04975","SJAG_05001","SJAG_04301","SJAG_03282","SJAG_03202","SJAG_01675","SJAG_00239","SJAG_02582","SJAG_02145","SJAG_04723","SJAG_03800","SJAG_02260","SJAG_02694","SJAG_00415","SJAG_05013","SJAG_00530","SJAG_01128","SJAG_04067","SJAG_04238","SJAG_03270","SJAG_02568","SJAG_02258","SJAG_01970","SJAG_00218","SJAG_04851","SJAG_00554","SJAG_05261","SJAG_01427","SJAG_03295","SJAG_01755","SJAG_01038","SJAG_04807","SJAG_03333","SJAG_01189","SJAG_03672","SJAG_01626","SJAG_00906","SJAG_00131","SJAG_06425","SJAG_04435","SJAG_03749","SJAG_00680","SJAG_03280","SJAG_01445","SJAG_00593","SJAG_02877","SJAG_00403","SJAG_00161","SJAG_01006","SJAG_04106","SJAG_03203","SJAG_03444","SJAG_03138","SJAG_03930","SJAG_00286","SJAG_02131","SJAG_03816","SJAG_01290","SJAG_01416","SJAG_01595","SJAG_00517","SJAG_04193","SJAG_00025","SJAG_00620","SJAG_01868","SJAG_04483","SJAG_04797","SJAG_03640","SJAG_02190","SJAG_02478","SJAG_04905","SJAG_00708","SJAG_05291","SJAG_01846","SJAG_00096","SJAG_04850","SJAG_00709","SJAG_04799","SJAG_04363","SJAG_05327","SJAG_02495","SJAG_01965","SJAG_02173","SJAG_00057","SJAG_00876","SJAG_02944","SJAG_01991","SJAG_02389","SJAG_04770","SJAG_04398","SJAG_01709","SJAG_01985","SJAG_04685","SJAG_04833","SJAG_00254","SJAG_00437","SJAG_04345","SJAG_01321","SJAG_00310","SJAG_02049","SJAG_01858","SJAG_01705","SJAG_01999","SJAG_03820","SJAG_02839","SJAG_03521","SJAG_00810","SJAG_04196","SJAG_02958","SJAG_02432","SJAG_01136","SJAG_04236","SJAG_03178","SJAG_00222","SJAG_04927","SJAG_02191","SJAG_03414","SJAG_04419","SJAG_01458","SJAG_04904","SJAG_03650","SJAG_04209","SJAG_01968","SJAG_04525","SJAG_00751","SJAG_04571","SJAG_04073","SJAG_04819","SJAG_01363","SJAG_02875","SJAG_02192","SJAG_03483","SJAG_01086","SJAG_01421","SJAG_04835","SJAG_04677","SJAG_00490","SJAG_04821","SJAG_00110","SJAG_04796","SJAG_03535","SJAG_01861","SJAG_02959","SJAG_03239","SJAG_03814","SJAG_02093","SJAG_04720","SJAG_02949","SJAG_01388","SJAG_02091","SJAG_02827","SJAG_03727","SJAG_05272","SJAG_02301","SJAG_01488","SJAG_02987","SJAG_02537","SJAG_00860","SJAG_04090","SJAG_01069","SJAG_03030","SJAG_06600","SJAG_00357","SJAG_04924","SJAG_00109","SJAG_02437","SJAG_04247","SJAG_02823","SJAG_01029","SJAG_01689","SJAG_05008","SJAG_00781","SJAG_16452","SJAG_04096","SJAG_01835","SJAG_02413","SJAG_04598","SJAG_00981","SJAG_00975","SJAG_00852","SJAG_02134","SJAG_01959","SJAG_04785","SJAG_03824","SJAG_04864","SJAG_00771","SJAG_03148","SJAG_03201","SJAG_00732","SJAG_04875","SJAG_02076","SJAG_00484","SJAG_04906","SJAG_00667","SJAG_04808","SJAG_01171","SJAG_02435","SJAG_02193","SJAG_02676","SJAG_03204","SJAG_00288","SJAG_05353","SJAG_04046","SJAG_00846","SJAG_01028","SJAG_01407","SJAG_05279","SJAG_00340","SJAG_00784","SJAG_01223"],"annotation_feature_type":"gene","cv_annotations":{"sequence":[{"annotations":[80818,80784,80782,80814,80845,80893,80785,80931,81093,80925,80938,80932,81044,80908,81082,80794,80928,80962,81059,81087,80805,80816,80824,80787,81040,80950,81099,80795,80973,80984,80963,81052,81092,80830,81024,81041,81006,81074,81078,81009,80879,81049,80949,81090,80792,80828,81008,81014,80844,80987,81085,80780,80942,81047,81084,80972,80899,80912,80898,80924,81048,80863,80776,80831,81089,80992,81098,80998,81088,80819,80799,80909,80871,80808,81039,80798,81094,80815,80894,80991,80860,80881,80861,81035,80829,80877,80970,80847,80937,80823,80905,81037,80797,80876,80812,80820,81075,80918,80974,80870,80775,80920,80777,81032,81053,81033,80914,80964,80951,80778,80986,80801,80997,80907,81096,80846,80901,80810,80832,80859,80868,80913,81091,80903,81036,80990,80817,80821,80911,80880,80927,80895,80896,80965,80958,81017,81005,81081,80838,80943,81023,81012,80941,80813,81083,80872,81026,80809,80826,80988,81007,81015,80979,80806,81022,80783,80793,80904,80886,81054,81010,81055,81016,80978,80982,80976,80773,80968,80774,80858,81061,81051,80919,80922,80923,80983,80906,80989,81031,80888,81045,80967,80959,80971,81097,80862,80848,80993,80807,81071,80842,80800,80917,80948,80796,80843,80954,80960,80966,80975,81027,80900,81018,81056,80841,81011,81057,81058,80956,81077,81030,81062,80867,80916,80961,80825,80839,80857,81004,81060,81000,80827,80788,80790,81063,80882],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"SO:0000418"}]},"cv_name":"sequence","definition":"The cleaved_peptide_region is the region of a peptide sequence that is cleaved during maturation.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"},{"relation_name":"part_of","term_name":"immature_peptide_region","termid":"SO:0001063"}],"gene_count":226,"genes_by_uniquename":{"SJAG_00025":null,"SJAG_00057":null,"SJAG_00096":null,"SJAG_00109":null,"SJAG_00110":null,"SJAG_00131":null,"SJAG_00161":null,"SJAG_00218":null,"SJAG_00222":null,"SJAG_00239":null,"SJAG_00254":null,"SJAG_00286":null,"SJAG_00288":null,"SJAG_00310":null,"SJAG_00340":null,"SJAG_00357":null,"SJAG_00367":null,"SJAG_00403":null,"SJAG_00415":null,"SJAG_00437":null,"SJAG_00481":null,"SJAG_00484":null,"SJAG_00490":null,"SJAG_00517":null,"SJAG_00530":null,"SJAG_00554":null,"SJAG_00570":null,"SJAG_00593":null,"SJAG_00620":null,"SJAG_00667":null,"SJAG_00680":null,"SJAG_00708":null,"SJAG_00709":null,"SJAG_00732":null,"SJAG_00751":null,"SJAG_00771":null,"SJAG_00780":null,"SJAG_00781":null,"SJAG_00784":null,"SJAG_00790":null,"SJAG_00810":null,"SJAG_00846":null,"SJAG_00852":null,"SJAG_00860":null,"SJAG_00876":null,"SJAG_00906":null,"SJAG_00975":null,"SJAG_00981":null,"SJAG_01006":null,"SJAG_01028":null,"SJAG_01029":null,"SJAG_01038":null,"SJAG_01069":null,"SJAG_01086":null,"SJAG_01128":null,"SJAG_01136":null,"SJAG_01171":null,"SJAG_01189":null,"SJAG_01223":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01363":null,"SJAG_01388":null,"SJAG_01407":null,"SJAG_01416":null,"SJAG_01421":null,"SJAG_01427":null,"SJAG_01445":null,"SJAG_01458":null,"SJAG_01488":null,"SJAG_01595":null,"SJAG_01626":null,"SJAG_01675":null,"SJAG_01689":null,"SJAG_01705":null,"SJAG_01709":null,"SJAG_01755":null,"SJAG_01835":null,"SJAG_01846":null,"SJAG_01858":null,"SJAG_01861":null,"SJAG_01868":null,"SJAG_01948":null,"SJAG_01959":null,"SJAG_01965":null,"SJAG_01968":null,"SJAG_01970":null,"SJAG_01985":null,"SJAG_01991":null,"SJAG_01999":null,"SJAG_02049":null,"SJAG_02076":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02102":null,"SJAG_02131":null,"SJAG_02134":null,"SJAG_02145":null,"SJAG_02173":null,"SJAG_02190":null,"SJAG_02191":null,"SJAG_02192":null,"SJAG_02193":null,"SJAG_02258":null,"SJAG_02260":null,"SJAG_02301":null,"SJAG_02389":null,"SJAG_02413":null,"SJAG_02432":null,"SJAG_02435":null,"SJAG_02437":null,"SJAG_02478":null,"SJAG_02489":null,"SJAG_02495":null,"SJAG_02537":null,"SJAG_02568":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02676":null,"SJAG_02694":null,"SJAG_02823":null,"SJAG_02827":null,"SJAG_02839":null,"SJAG_02875":null,"SJAG_02877":null,"SJAG_02944":null,"SJAG_02949":null,"SJAG_02958":null,"SJAG_02959":null,"SJAG_02987":null,"SJAG_03030":null,"SJAG_03057":null,"SJAG_03138":null,"SJAG_03148":null,"SJAG_03178":null,"SJAG_03201":null,"SJAG_03202":null,"SJAG_03203":null,"SJAG_03204":null,"SJAG_03239":null,"SJAG_03270":null,"SJAG_03280":null,"SJAG_03282":null,"SJAG_03295":null,"SJAG_03333":null,"SJAG_03414":null,"SJAG_03444":null,"SJAG_03483":null,"SJAG_03521":null,"SJAG_03535":null,"SJAG_03606":null,"SJAG_03640":null,"SJAG_03650":null,"SJAG_03672":null,"SJAG_03727":null,"SJAG_03749":null,"SJAG_03800":null,"SJAG_03814":null,"SJAG_03816":null,"SJAG_03820":null,"SJAG_03824":null,"SJAG_03930":null,"SJAG_04046":null,"SJAG_04067":null,"SJAG_04073":null,"SJAG_04090":null,"SJAG_04096":null,"SJAG_04106":null,"SJAG_04184":null,"SJAG_04193":null,"SJAG_04196":null,"SJAG_04209":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04247":null,"SJAG_04301":null,"SJAG_04345":null,"SJAG_04363":null,"SJAG_04398":null,"SJAG_04419":null,"SJAG_04435":null,"SJAG_04483":null,"SJAG_04525":null,"SJAG_04571":null,"SJAG_04598":null,"SJAG_04677":null,"SJAG_04685":null,"SJAG_04720":null,"SJAG_04723":null,"SJAG_04770":null,"SJAG_04785":null,"SJAG_04786":null,"SJAG_04789":null,"SJAG_04796":null,"SJAG_04797":null,"SJAG_04799":null,"SJAG_04807":null,"SJAG_04808":null,"SJAG_04819":null,"SJAG_04821":null,"SJAG_04833":null,"SJAG_04835":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04864":null,"SJAG_04875":null,"SJAG_04904":null,"SJAG_04905":null,"SJAG_04906":null,"SJAG_04922":null,"SJAG_04924":null,"SJAG_04927":null,"SJAG_04975":null,"SJAG_05001":null,"SJAG_05008":null,"SJAG_05013":null,"SJAG_05189":null,"SJAG_05261":null,"SJAG_05272":null,"SJAG_05279":null,"SJAG_05291":null,"SJAG_05327":null,"SJAG_05353":null,"SJAG_06425":null,"SJAG_06600":null,"SJAG_16452":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"cleaved_peptide_region","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"cleaved peptide region","type":"exact"}],"termid":"SO:0100011","terms_by_termid":{"SO:0000418":null}}


id: PBO:0064443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POC1 centriolar protein B","termid":"PBO:0064443"}


id: GO:0035701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a hematopoietic stem cell from one site to another. A hematopoietic stem cell is a cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.","definition_xrefs":["GOC:BHF","PMID:20234092","CL:0000037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic stem cell migration","synonyms":[{"name":"hemopoietic stem cell migration","type":"exact"}],"termid":"GO:0035701"}


id: PBO:0062025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily M member 7","termid":"PBO:0062025"}


id: PBO:0080881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPEL5 pseudogene 1","termid":"PBO:0080881"}


id: GO:0050742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via S-(4a-FMN)-L-cysteine.","definition_xrefs":["RESID:AA0351"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via S-(4a-FMN)-L-cysteine (obsolete GO:0050742)","termid":"GO:0050742"}


id: GO:0050691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any host process that modulates the frequency, rate, or extent of the antiviral response of a host cell or organism.","definition_xrefs":["GOC:ai","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response to virus","termid":"GO:0050688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to virus by host","synonyms":[{"name":"host regulation of antiviral response","type":"exact"},{"name":"regulation by host of antiviral response","type":"exact"},{"name":"regulation of antiviral response by host","type":"related"}],"termid":"GO:0050691"}


id: PBO:0051797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing M","termid":"PBO:0051797"}


id: FYPO:0007414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a subtelomeric region (STE1) adjacent to telomeric repeats is duplicated by homologous recombination.","definition_xrefs":["PomBase:mah","PMID:29392410","PMID:31980821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology during G0","termid":"FYPO:0007413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"subtelomere expansion during G0","synonyms":[{"name":"STE1 expansion during G0","type":"exact"},{"name":"STEEx during G0","type":"exact"},{"name":"amplification of subtelomeric regions in G0","type":"exact"},{"name":"subtelomere amplification during G0","type":"exact"},{"name":"subtelomere expansion during cell quiescence","type":"exact"},{"name":"subtelomere expansion during quiescence","type":"exact"},{"name":"subtelomere rearrangement during G0","type":"related"},{"name":"subtelomeric region expansion during G0","type":"exact"}],"termid":"FYPO:0007414"}


id: MONDO:0006088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A circumscribed neoplasm arising from the glandular epithelium of the appendix. Morphologically, it is characterized by a proliferation of neoplastic glandular cells and it is associated with dysplasia. According to the growth pattern, it may be classified as tubular, villous, or tubulovillous. The dysplasia is classified as mild, moderate, or severe.","definition_xrefs":["NCIT:C43550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenoma","termid":"MONDO:0000527"},{"relation_name":"is_a","term_name":"epithelial tumor of the appendix","termid":"MONDO:0018511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"appendix adenoma","secondary_identifiers":["UMLS:C1706829","MEDGEN:312900","EFO:1000089"],"synonyms":[{"name":"appendix adenoma","type":"exact"},{"name":"vermiform appendix adenoma","type":"exact"}],"termid":"MONDO:0006088","xrefs":{"Monarch":{"xref_id":"0006088"}}}


id: FYPO:0000151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic chromosome segregation is abnormal. Meiotic chromosome segregation is the entire process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets during M phase of the meiotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0045132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome segregation","termid":"FYPO:0000029"},{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"},{"relation_name":"part_of","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal meiotic chromosome segregation","synonyms":[{"name":"meiotic chromosome missegregation","type":"related"}],"termid":"FYPO:0000151"}


id: PBO:0060937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFE2 like bZIP transcription factor 1","termid":"PBO:0060937"}


id: PATO:0000154
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000154 pain threshold (obsolete PATO:0000154)","termid":"PATO:0000154"}


id: MONDO:0001143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"strabismus","termid":"MONDO:0003432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralytic strabismus","secondary_identifiers":["ICD9:378.5","MEDGEN:508935","ICD9:378.50","UMLS:C0152221","SCTID:400942002","DOID:10863","EFO:0009678","HP:0031775"],"synonyms":[{"name":"incomitant dissociation","type":"exact"},{"name":"paralytic squint","type":"exact"}],"termid":"MONDO:0001143","xrefs":{"Monarch":{"xref_id":"0001143"}}}


id: MONDO:0013187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital factor XIII deficiency","termid":"MONDO:0018029"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor XIII, A subunit, deficiency of","secondary_identifiers":["MEDGEN:442497","SCTID:439455002","UMLS:C2750514","OMIM:613225","MESH:C567691","GARD:15633"],"synonyms":[{"name":"factor XIII, A subunit, deficiency of","type":"exact"},{"name":"factor XIIIA deficiency","type":"exact"},{"name":"hereditary factor XIII A subunit deficiency","type":"exact"},{"name":"hereditary factor XIII alpha subunit deficiency","type":"exact"},{"name":"hereditary factor XIII type II deficiency","type":"exact"}],"termid":"MONDO:0013187","xrefs":{"Monarch":{"xref_id":"0013187"}}}


id: GO:0034308
data:
  {"annotated_genes":["SJAG_03362","SJAG_02047","SJAG_03370","SJAG_00240","SJAG_02421","SJAG_05006","SJAG_02406","SJAG_03743","SJAG_00381","SJAG_04282","SJAG_03822","SJAG_02420","SJAG_03538","SJAG_00827","SJAG_01742","SJAG_01970","SJAG_01414","SJAG_04866","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99062,99061,115000,115001,88828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[96909],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[114066,89361],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[77495,78761,74295,70555,61749,74374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[66382,59066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006772"},{"annotations":[110819,99861,110820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving primary alcohols. A primary alcohol is any alcohol in which a hydroxy group, -OH, is attached to a saturated carbon atom which has either three hydrogen atoms attached to it or only one other carbon atom and two hydrogen atoms attached to it.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_00381":null,"SJAG_00827":null,"SJAG_01414":null,"SJAG_01742":null,"SJAG_01970":null,"SJAG_02047":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03370":null,"SJAG_03538":null,"SJAG_03743":null,"SJAG_03822":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"primary alcohol metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"monohydric alcohol metabolic process","type":"exact"},{"name":"primary alcohol metabolism","type":"exact"}],"termid":"GO:0034308","terms_by_termid":{"GO:0006772":null,"GO:0009228":null,"GO:0019655":null,"GO:0036172":null,"GO:0090180":null,"GO:2001172":null}}


id: PBO:0074605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 11F","termid":"PBO:0074605"}


id: PBO:0116615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3141","termid":"PBO:0116615"}


id: GO:0039574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupt a JAK-STAT signal cascade in the host organism by reducing the activity of host TYK2 (tyrosine kinase 2). TYK2 is an intracellular signal-transducing tyrosine kinase involved in numerous cytokines and interferons signaling pathways and transmits the cytokine signal by phosphorylating receptor subunits.","definition_xrefs":["PMID:16987978","PMID:19085955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host JAK-STAT cascade","termid":"GO:0039514"},{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host innate immune response","termid":"GO:0052170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host JAK-STAT cascade via inhibition of host TYK2 activity","secondary_identifiers":["VZ:720"],"synonyms":[{"name":"disruption by virus of host JAK-STAT cascade via inhibition of host TYK2 activity","type":"narrow"},{"name":"suppression by virus of host JAK-STAT cascade via inhibition of host TYK2 activity","type":"narrow"},{"name":"suppression by virus of host TYK2 activity","type":"narrow"},{"name":"suppression by virus of host non-receptor tyrosine-protein kinase TYK2 activity","type":"narrow"}],"termid":"GO:0039574"}


id: MONDO:0013634
data:
  {"annotated_genes":["SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86145],"is_not":false,"summary":null,"term":"MONDO:0013634"}]},"cv_name":"mondo","definition":"Any hereditary sensory and autonomic neuropathy type 2 in which the cause of the disease is a mutation in the KIF1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy type 2","termid":"MONDO:0019941"},{"relation_name":"is_a","term_name":"KIF1A related neurological disorder","termid":"MONDO:0700055"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuropathy, hereditary sensory, type 2C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3280168","GARD:15774","OMIM:614213","DOID:0070147","MEDGEN:481798"],"synonyms":[{"name":"HSN2C","type":"exact"},{"name":"KIF1A hereditary sensory and autonomic neuropathy type 2","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type 2 caused by mutation in KIF1A","type":"exact"},{"name":"hereditary sensory neuropathy type 2C","type":"related"},{"name":"hereditary sensory neuropathy type IIC","type":"exact"},{"name":"neuropathy, hereditary sensory, type IIC","type":"related"}],"termid":"MONDO:0013634","terms_by_termid":{"MONDO:0013634":null},"xrefs":{"Monarch":{"xref_id":"0013634"}}}


id: PBO:0048376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor 1B","termid":"PBO:0048376"}


id: PBO:0071726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 24","termid":"PBO:0071726"}


id: PBO:0058826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8056","termid":"PBO:0058826"}


id: FYPO:0006281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of mitotic recombination is decreased in centromeric regions.","definition_xrefs":["PMID:28977643","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic recombination","termid":"FYPO:0000482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic recombination at centromere","termid":"FYPO:0006281"}


id: PBO:0012540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_development_of","termid":"PBO:0012540"}


id: GO:0102444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isorhamnetin + S-adenosyl-L-methionine = 3,3'-O-dimethylquercetin + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isorhamnetin 3-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13929"],"termid":"GO:0102444"}


id: GO:0042016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-20 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-20 receptor activity","synonyms":[{"name":"IL-20 receptor activity","type":"exact"},{"name":"IL-20R","type":"exact"}],"termid":"GO:0042016"}


id: PBO:0045292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 44","termid":"PBO:0045292"}


id: PBO:0028635
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cytochalasin_D","termid":"PBO:0028635"}


id: PBO:0082222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-arrestin, component of the Rsp5p E3-ubiquitin ligase complex; ubiquitin-binding adaptor involved in down-regulation of general amino acid transporter Gap1p upon shift to preferred nitrogen source; involved in lactate transporter Jen1p endocytosis; BUL1 has a paralog, BUL2, that arose from the whole genome duplication","termid":"PBO:0082222"}


id: GO:0044577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of xylose, an aldopentose, into ethanol.","definition_xrefs":["GOC:tt","PMID:26927067","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"},{"relation_name":"is_a","term_name":"D-xylose catabolic process","termid":"GO:0042843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"D-xylose catabolic process to ethanol","synonyms":[{"name":"D-xylose fermentation","type":"exact"},{"name":"xylose catabolism to ethanol","type":"exact"}],"termid":"GO:0044577"}


id: GO:1990622
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that is composed of CHOP (C/EBP homology protein, GADD153) and ATF3 (activating transcription factor 3) subunits.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:8622660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"CHOP-ATF3 complex","synonyms":[{"name":"ATF3-CHOP complex","type":"exact"},{"name":"CHOP-ATF3 heterodimer","type":"exact"},{"name":"CHOP-ATF3 heterodimeric complex","type":"exact"},{"name":"GADD153-ATF3 complex","type":"exact"}],"termid":"GO:1990622"}


id: GO:0031525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of menthol, the monoterpene 2-isopropyl-5-methylcyclohexanol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid biosynthetic process","termid":"GO:0016099"},{"relation_name":"is_a","term_name":"menthol metabolic process","termid":"GO:0031524"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"menthol biosynthetic process","synonyms":[{"name":"menthol anabolism","type":"exact"},{"name":"menthol biosynthesis","type":"exact"},{"name":"menthol formation","type":"exact"},{"name":"menthol synthesis","type":"exact"}],"termid":"GO:0031525"}


id: GO:0048844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of arterial blood vessels are generated and organized. Arteries are blood vessels that transport blood from the heart to the body and its organs.","definition_xrefs":["GOC:dsf","PMID:16740480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel morphogenesis","termid":"GO:0048514"},{"relation_name":"part_of","term_name":"artery development","termid":"GO:0060840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"artery morphogenesis","synonyms":[{"name":"arterial morphogenesis","type":"exact"},{"name":"arteriogenesis","type":"exact"}],"termid":"GO:0048844"}


id: RO:0002105
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a motor neuron and a muscle that it synapses to via a type Ib bouton.","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_to","termid":"RO:0002120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_via_type_Ib_bouton_to","termid":"RO:0002105"}


id: PBO:0065287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 2","termid":"PBO:0065287"}


id: PR:O14210
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ies2 gene.","definition_xrefs":["UniProtKB:O14210","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.05c","synonyms":[{"name":"Spom972h-ies2","type":"exact"}],"termid":"PR:O14210"}


id: FYPO:0008237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of glycerophospholipid measured in a cell is normal (i.e. indistinguishable from wild type) when the cell is in the vegetative growth phase of the life cycle.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal glycerophospholipid level during vegetative growth","termid":"FYPO:0008237"}


id: GO:0097677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the signal transducers and activators of transcription (STAT) protein family. STATs are, as the name indicates, both signal transducers and transcription factors. STATs are activated by cytokines and some growth factors and thus control important biological processes including cell growth, cell differentiation, apoptosis and immune responses.","definition_xrefs":["PMID:21447371","PMID:24470978","InterPro:IPR001217","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"STAT family protein binding","synonyms":[{"name":"signal transducers and activators of transcription family protein binding","type":"exact"}],"termid":"GO:0097677"}


id: MOD:00275
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-histidine residue and an L-tyrosine residue by a carbon-nitrogen bond to form 3'-(1'-L-histidyl)-L-tyrosine.","definition_xrefs":["ChEBI:19837","PubMed:10338009","RESID:AA0270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-(1'-L-histidyl)-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-[1-(5-[(2S)-2-amino-2-carboxyethyl]-2-hydroxyphenyl)-1H-imidazol-4-yl]propanoic acid","type":"exact"},{"name":"3'-(1'-L-histidyl)-L-tyrosine","type":"exact"},{"name":"3'-(N(epsilon)-histidyl)tyrosine","type":"exact"},{"name":"3'-(N1'-histidyl)tyrosine","type":"exact"},{"name":"3'-(tau-histidyl)tyrosine","type":"exact"},{"name":"3'-(tele-histidyl)tyrosine","type":"exact"},{"name":"CROSSLNK 1'-histidyl-3'-tyrosine (His-Tyr)","type":"exact"}],"termid":"MOD:00275"}


id: PBO:0088627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein Coq4","termid":"PBO:0088627"}


id: GO:0003004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The menstrual cycle process in which one central cavity separating the oocyte/cumulus complex from mural granulosa and theca cells is formed as part of the antral spaces stage of oogenesis.","definition_xrefs":["GOC:isa_complete","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"follicular fluid formation in ovarian follicle antrum","termid":"GO:0001548"},{"relation_name":"part_of","term_name":"distinct antral spaces stage","termid":"GO:0048164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular fluid formation in ovarian follicle antrum involved in distinct antral spaces stage","synonyms":[{"name":"follicular fluid formation in ovarian follicle antrum during distinct antral spaces stage","type":"related"}],"termid":"GO:0003004"}


id: PBO:0082933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic assembly chaperone for ribosomal protein Rps2p; co-translationally associates with the N-terminal extension of Rps2p to facilitate expression, solubility and ribosome assembly; released prior to the nuclear import of Rps2p; required for correct processing of 20S pre-rRNA at site D to generate mature 18S rRNA; essential gene in the S288C background but not in CEN.PK2; homologous to human PDCD2L and PDCD2","termid":"PBO:0082933"}


id: MONDO:0000984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited blood disorder characterized by a decreased synthesis of one of the polypeptide chains that form hemoglobin. Anemia results from this abnormal hemoglobin formation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thalassemia","secondary_identifiers":["ICD9:282.40","GARD:7756","ICD9:282.49","NANDO:2200626","NCIT:C35069","MESH:D013789","ICD9:282.4","ICD10CM:D56","EFO:1001996","DOID:10241","MEDGEN:21121","SCTID:40108008","UMLS:C0039730"],"synonyms":[{"name":"sickle-cell thalassemia with crisis","type":"exact"},{"name":"sickle-cell thalassemia without crisis","type":"exact"},{"name":"thalassemia Hb-S disease with crisis","type":"exact"},{"name":"thalassemia Hb-S disease without crisis","type":"exact"}],"termid":"MONDO:0000984","xrefs":{"Monarch":{"xref_id":"0000984"}}}


id: PBO:0055067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2483","termid":"PBO:0055067"}


id: PBO:0114605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytic adaptor, ENTH/VHS domain Yap18","termid":"PBO:0114605"}


id: PBO:0065669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type R","termid":"PBO:0065669"}


id: GO:1902618
data:
  {"annotated_genes":["SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114125],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140114"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluoride stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:8138152","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to fluoride","termid":"GO:1902617"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fluoride","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902618","terms_by_termid":{"GO:0140114":null}}


id: GO:0160183
data:
  {"annotated_genes":["SJAG_01073","SJAG_04991","SJAG_03435","SJAG_00079"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140506"},{"annotations":[114922,60778,90295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140580"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a target membrane and an autophagosome during autophagy.","definition_xrefs":["PMID:30544615","PMID:36635405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-membrane adaptor activity","termid":"GO:0043495"},{"relation_name":"is_a","term_name":"autophagy cargo adaptor activity","termid":"GO:0160247"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00079":null,"SJAG_01073":null,"SJAG_03435":null,"SJAG_04991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"autophagosome-membrane adaptor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0160183","terms_by_termid":{"GO:0140506":null,"GO:0140580":null}}


id: GO:2000991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of galactomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"galactomannan catabolic process","termid":"GO:0051682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of galactomannan catabolic process","termid":"GO:2000991"}


id: PBO:0016890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family meiotic suppressor protein Ste7","termid":"PBO:0016890"}


id: GO:1900884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tridecane biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tridecane metabolic process","termid":"GO:1900893"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"tridecane biosynthetic process","termid":"GO:1900632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tridecane biosynthetic process","synonyms":[{"name":"regulation of tridecane anabolism","type":"exact"},{"name":"regulation of tridecane biosynthesis","type":"exact"},{"name":"regulation of tridecane formation","type":"exact"},{"name":"regulation of tridecane synthesis","type":"exact"}],"termid":"GO:1900884"}


id: SO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The last base to be translated into protein. It does not include the stop codon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_end","synonyms":[{"name":"coding end","type":"exact"},{"name":"translation termination site","type":"exact"},{"name":"translation_end","type":"exact"}],"termid":"SO:0000327"}


id: PBO:0090167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription elongation factor Eaf1","termid":"PBO:0090167"}


id: PBO:0040866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMAL2 antisense RNA 1","termid":"PBO:0040866"}


id: MONDO:0009896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymyoclonus, infantile","secondary_identifiers":["UMLS:C1849731","OMIM:263550","MEDGEN:376647","MESH:C535524"],"synonyms":[{"name":"polymyoclonus, infantile","type":"exact"}],"termid":"MONDO:0009896","xrefs":{"Monarch":{"xref_id":"0009896"}}}


id: SO:0001267
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding a small noncoding RNA that participates in the processing or chemical modifications of many RNAs, including ribosomal RNAs and spliceosomal RNAs.","direct_ancestors":[{"relation_name":"has_quality","term_name":"snoRNA_encoding","termid":"SO:0000578"},{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA_gene","synonyms":[{"name":"snoRNA gene","type":"exact"}],"termid":"SO:0001267"}


id: GO:0008822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete crotonobetaine/carnitine-CoA ligase activity (obsolete GO:0008822)","synonyms":[{"name":"crotonobetaine/carnitine-CoA ligase activity","type":"exact"}],"termid":"GO:0008822"}


id: GO:0015744
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098720"}]},"cv_name":"biological_process","definition":"The directed movement of succinate, the dianion of ethane dicarboxylic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"succinate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015744","terms_by_termid":{"GO:0098720":null}}


id: PBO:0075727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRM pseudogene 3","termid":"PBO:0075727"}


id: SO:1001262
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a translational frameshift of -1.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translationally_frameshifted","termid":"SO:0000887"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_1_translationally_frameshifted","synonyms":[{"name":"minus 1 translationally frameshifted","type":"exact"}],"termid":"SO:1001262"}


id: MONDO:1010456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy that occurs in woolly monkeys.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, woolly monkeys","secondary_identifiers":["OMIA:000515-9518"],"termid":"MONDO:1010456","xrefs":{"Monarch":{"xref_id":"1010456"}}}


id: GO:0072208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of smooth muscle in the metanephros over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney smooth muscle tissue development","termid":"GO:0072194"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric smooth muscle tissue development","termid":"GO:0072208"}


id: GO:0120530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-alpha-D-glucose, a substance composed of alpha-D-glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["MetaCyc:PWY-7343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-alpha-D-glucose metabolic process","termid":"GO:0006011"},{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-alpha-D-glucose biosynthetic process","synonyms":[{"name":"UDP-D-glucose biosynthesis","type":"exact"},{"name":"UDP-D-glucose biosynthetic process","type":"exact"},{"name":"UDP-glucose biosynthesis","type":"exact"},{"name":"uridine diphosphate glucose biosynthesis","type":"exact"},{"name":"uridine diphosphate glucose biosynthetic process","type":"exact"}],"termid":"GO:0120530"}


id: PBO:0083685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enolase, a phosphopyruvate hydratase; catalyzes the conversion of 2-phosphoglycerate to phosphoenolpyruvate; complements the growth defect of an ENO1 ENO2 double mutant","termid":"PBO:0083685"}


id: GO:1990437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The posttranscriptional addition of a methyl group to the 2' oxygen atom of a nucleotide residue in an snRNA molecule.","definition_xrefs":["PMID:11842100","PMID:9844635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA methylation","termid":"GO:0106349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0016073","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"snRNA 2'-O-methylation","termid":"GO:1990437"}


id: PR:Q2HQL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1347.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q2HQL6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1347.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.14c","synonyms":[{"name":"Spom972h-SPBC1347.14c","type":"exact"}],"termid":"PR:Q2HQL6"}


id: PBO:0041729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMK2G antisense RNA 1","termid":"PBO:0041729"}


id: GO:1904232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of aconitate hydratase activity.","definition_xrefs":["PMID:18160053","GOC:rl","GOC:BHF","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of aconitate hydratase activity (obsolete GO:1904232)","synonyms":[{"name":"regulation of aconitase activity","type":"exact"},{"name":"regulation of cis-aconitase activity","type":"exact"},{"name":"regulation of citrate hydro-lyase activity","type":"broad"},{"name":"regulation of citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"exact"},{"name":"regulation of citrate(isocitrate) hydro-lyase activity","type":"exact"}],"termid":"GO:1904232"}


id: MONDO:0022057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow growing, locally invasive neoplasm arising from tooth-forming tissues. It most often grows intraosseously in the mandible and less frequently in the maxilla. In a minority of cases it grows extraosseously in the gingiva. It is characterized by the presence of a fibrous stroma, epithelial cells with abundant eosinophilic cytoplasm, and amyloid material which is often calcified. Small tumors may be successfully treated with enucleation. Local resection is usually required for larger tumors. Recurrences have been reported in a minority of cases.","definition_xrefs":["NCIT:C54301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"odontogenic neoplasm","termid":"MONDO:0021192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"calcifying epithelial odontogenic tumor","secondary_identifiers":["ICDO:9340/0","MEDGEN:87266","MESH:C537961","UMLS:C0334574"],"synonyms":[{"name":"CEOT","type":"related"},{"name":"Pindborg tumor","type":"exact"},{"name":"Pindborg tumour","type":"exact"},{"name":"calcifying epithelial odontogenic tumor","type":"exact"}],"termid":"MONDO:0022057","xrefs":{"Monarch":{"xref_id":"0022057"}}}


id: PBO:0081464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 334","termid":"PBO:0081464"}


id: PBO:0089025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated PX/BAR domain sorting nexin Atg24","termid":"PBO:0089025"}


id: PBO:0045024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disrupted in renal carcinoma 1","termid":"PBO:0045024"}


id: MONDO:0009569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hennekam-Beemer syndrome is characterized by the association of skin mastocytosis (appearing as diffuse pigmentation), short stature, microcephaly, conductive hearing loss, and dysmorphic features. It has been described in only two (female) cases: one with normal mental development born to consanguineous parents and the other with severe psychomotor retardation born to unrelated parents. The mode of inheritance is most likely autosomal recessive.","definition_xrefs":["Orphanet:2135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hennekam-Beemer syndrome","secondary_identifiers":["MEDGEN:462843","ICD10CM:Q82.2","UMLS:C3151493","GARD:3409","SCTID:722453009","MESH:C536033","OMIM:248910"],"synonyms":[{"name":"Hennekam Beemer syndrome","type":"related"},{"name":"cutaneous mastocytosis, conductive hearing loss and microtia","type":"related"},{"name":"mastocytosis cutaneous with short stature conductive hearing loss and microtia","type":"related"},{"name":"mastocytosis-short stature-hearing loss syndrome","type":"exact"},{"name":"skin mastocytosis hearing loss microcephaly mild dysmorphic features and severe intellectual disability","type":"related"},{"name":"skin mastocytosis hearing loss microcephaly mild dysmorphic features and severe mental retardation","type":"related"}],"termid":"MONDO:0009569","xrefs":{"Monarch":{"xref_id":"0009569"}}}


id: GO:0071669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the biosynthesis of constituent macromolecules, assembly, arrangement of constituent parts, or disassembly of a cellulose- and pectin-containing cell wall.","definition_xrefs":["GOC:mah","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"plant-type cell wall organization or biogenesis","synonyms":[{"name":"plant-type cell wall organisation or biogenesis","type":"exact"},{"name":"plant-type cell wall organization and biogenesis","type":"related"}],"termid":"GO:0071669"}


id: PBO:0026949
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_centromere_central_core","termid":"PBO:0026949"}


id: MONDO:0011507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, congenital autoimmune","secondary_identifiers":["OMIM:605026","UMLS:C1857958","MEDGEN:347586","MESH:C565730"],"synonyms":[{"name":"diabetes mellitus, congenital autoimmune","type":"exact"}],"termid":"MONDO:0011507","xrefs":{"Monarch":{"xref_id":"0011507"}}}


id: MONDO:0013230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hot water reflex epilepsy","termid":"MONDO:0013229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, hot water, 2","secondary_identifiers":["OMIM:613340","MEDGEN:461886","DOID:0081107","GARD:18287","UMLS:C3150536"],"synonyms":[{"name":"HWE2","type":"related"},{"name":"epilepsy, hot water, 2","type":"exact"}],"termid":"MONDO:0013230","xrefs":{"Monarch":{"xref_id":"0013230"}}}


id: PBO:0039153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 4","termid":"PBO:0039153"}


id: MONDO:0014247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, autosomal dominant disorder caused by mutation in the SCN11A gene. It is characterized by intense episodic pain mainly affecting the distal lower extremities in early childhood. The pain diminishes with age.","definition_xrefs":["NCIT:C125390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"familial episodic pain syndrome","termid":"MONDO:0018319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"familial episodic pain syndrome with predominantly lower limb involvement","secondary_identifiers":["OMIM:615552","GARD:17619","Orphanet:391392","DOID:0111731","UMLS:C3809899","MEDGEN:816229"],"synonyms":[{"name":"FEPS3","type":"related"},{"name":"episodic pain syndrome, familial, 3","type":"related"},{"name":"episodic pain syndrome, familial, type 3","type":"exact"}],"termid":"MONDO:0014247","xrefs":{"Monarch":{"xref_id":"0014247"}}}


id: GO:0180055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of some metal ion.","definition_xrefs":["PMID:24024382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to metal ion starvation","termid":"GO:0180055"}


id: GO:1900276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of proteinase activated receptor activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of proteinase activated receptor activity (obsolete GO:1900276)","termid":"GO:1900276"}


id: GO:1904236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of substrate-dependent cell migration, cell attachment to substrate.","definition_xrefs":["PMID:25834989","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-substrate adhesion","termid":"GO:0010812"},{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of substrate-dependent cell migration, cell attachment to substrate","termid":"GO:1904235"},{"relation_name":"negatively_regulates","term_name":"substrate-dependent cell migration, cell attachment to substrate","termid":"GO:0006931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of substrate-dependent cell migration, cell attachment to substrate","synonyms":[{"name":"down regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"down regulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"down-regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"down-regulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"downregulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"},{"name":"downregulation of substrate-dependent cell migration, cell attachment to substrate","type":"exact"},{"name":"inhibition of substrate-bound cell migration, cell attachment to substrate","type":"narrow"},{"name":"inhibition of substrate-dependent cell migration, cell attachment to substrate","type":"narrow"},{"name":"negative regulation of substrate-bound cell migration, cell attachment to substrate","type":"exact"}],"termid":"GO:1904236"}


id: PBO:0003551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein But2","termid":"PBO:0003551"}


id: FYPO:0004813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II at tRNA genes (tDNA) is abnormal.","definition_xrefs":["PomBase:mah","PMID:25417108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal termination of RNA polymerase II transcription","termid":"FYPO:0004811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase II transcription at tDNA","synonyms":[{"name":"abnormal RNA polymerase II release at tDNA","type":"related"},{"name":"abnormal RNA polymerase II transcription termination at tDNA","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription at tDNA during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase II transcription at tDNA during vegetative growth","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription at transfer RNA genes","type":"related"}],"termid":"FYPO:0004813"}


id: PBO:0089645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glomulin, ubiquitin-protein transferase inhibitor Glm2","termid":"PBO:0089645"}


id: MONDO:0010104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Noneruption of teeth - maxillary hypoplasia - genu valgum is an extremely rare syndrome that is characterized by multiple unerupted permanent teeth, hypoplasia of the alveolar process and of the maxillo-zygomatic region, severe genu valgum and deformed ears.","definition_xrefs":["Orphanet:2972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-eruption of teeth-maxillary hypoplasia-genu valgum syndrome","secondary_identifiers":["GARD:5027","OMIM:273050","SCTID:723442008","UMLS:C1848903","MEDGEN:341331"],"synonyms":[{"name":"Stoelinga de Koomen Davis syndrome","type":"related"},{"name":"Stoelinga-de Koomen-Davis syndrome","type":"exact"},{"name":"multiple non-erupting teeth, maxillo-zygomatical hypoplasia and other congenital defects","type":"related"},{"name":"multiple none-erupting teeth, maxillo-zygomatical hypoplasia and other congenital defects","type":"related"},{"name":"non erupted teeth with maxillary hypoplasia and genu valgum","type":"related"},{"name":"teeth noneruption of with maxillary hypoplasia and genu valgum","type":"related"},{"name":"teeth, noneruption of, with maxillary hypoplasia and genu valgum","type":"related"}],"termid":"MONDO:0010104","xrefs":{"Monarch":{"xref_id":"0010104"}}}


id: GO:1902428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of water channel activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of water channel activity (obsolete GO:1902428)","synonyms":[{"name":"down regulation of aquaporin","type":"narrow"},{"name":"down regulation of water channel activity","type":"exact"},{"name":"down-regulation of aquaporin","type":"narrow"},{"name":"down-regulation of water channel activity","type":"exact"},{"name":"downregulation of aquaporin","type":"narrow"},{"name":"downregulation of water channel activity","type":"exact"},{"name":"inhibition of aquaporin","type":"narrow"},{"name":"inhibition of water channel activity","type":"narrow"},{"name":"negative regulation of aquaporin","type":"narrow"}],"termid":"GO:1902428"}


id: PATO:0000290
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000290 absolute respiratory rate (obsolete PATO:0000290)","termid":"PATO:0000290"}


id: GO:0060739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell where it is received and interpreted contributing to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesenchymal-epithelial cell signaling involved in prostate gland development","synonyms":[{"name":"mesenchymal-epithelial cell signalling involved in prostate gland development","type":"exact"}],"termid":"GO:0060739"}


id: GO:0039632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive movement along a single- or double-stranded RNA molecule, which contributes to the packaging of viral RNA into a nucleocapsid.","definition_xrefs":["PMID:22297533","GOC:bm"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA translocase activity involved in viral RNA genome packaging (obsolete GO:0039632)","synonyms":[{"name":"RNA packaging ATPase activity","type":"exact"},{"name":"viral RNA packaging activity","type":"related"}],"termid":"GO:0039632"}


id: PBO:0000314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps55 (predicted)","termid":"PBO:0000314"}


id: GO:0009782
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The antenna complex of photosystem I. A photosystem has two closely linked components, an antenna containing light-absorbing pigments and a reaction center. Each antenna contains one or more light-harvesting complexes (LHCs).","definition_xrefs":["GOC:jid","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"photosystem I","termid":"GO:0009522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"photosystem I antenna complex","termid":"GO:0009782"}


id: PBO:0051644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"impact RWD domain protein","termid":"PBO:0051644"}


id: MONDO:0005717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious dermatitis of sheep and goats, affecting primarily the muzzle and lips. It is caused by a poxvirus and may be transmitted to humans.","definition_xrefs":["MESH:D004474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contagious pustular dermatitis","secondary_identifiers":["SCTID:74050005","EFO:0007222","MEDGEN:41702","ICD9:051.2","DOID:8771","UMLS:C0013570"],"synonyms":[{"name":"Orf","type":"exact"},{"name":"ecthyma contagiosum","type":"exact"},{"name":"ecthyma, Contagious","type":"exact"},{"name":"scabby mouth","type":"exact"},{"name":"sheep pox","type":"exact"},{"name":"thistle disease","type":"exact"}],"termid":"MONDO:0005717","xrefs":{"Monarch":{"xref_id":"0005717"}}}


id: PBO:0113013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aurora kinase of the chromosomal passenger complex; mediates release of mono-oriented kinetochores from microtubules in MI, and kinetochore release from SPB clusters during meiotic exit; maintains meiotic spindle checkpoint delay in a mek1 null; maintains condensed chromosomes in anaphase; required for SPB cohesion and preventing multipolar spindle formation; promotes telomerase release at G2/M; Iocalizes to nuclear foci that diffuse upon DNA replication stress; inhibits Pse1p upon SAC arrest","termid":"PBO:0113013"}


id: MONDO:1010524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in American mink.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, American mink","secondary_identifiers":["OMIA:000197-452646"],"termid":"MONDO:1010524","xrefs":{"Monarch":{"xref_id":"1010524"}}}


id: PBO:0012225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L family cyclin","termid":"PBO:0012225"}


id: GO:0035155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from adopting a terminal cell fate in an open tracheal system. Once the terminal and fusion fates have been correctly induced, inhibitory feedback loops prevent the remaining branch cells from assuming similar fates.","definition_xrefs":["PMID:10684581","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"terminal cell fate specification, open tracheal system","termid":"GO:0035154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of terminal cell fate specification, open tracheal system","synonyms":[{"name":"down regulation of terminal cell fate specification","type":"exact"},{"name":"down-regulation of terminal cell fate specification","type":"exact"},{"name":"downregulation of terminal cell fate specification","type":"exact"},{"name":"inhibition of terminal cell fate specification","type":"narrow"},{"name":"negative regulation of terminal cell fate specification","type":"exact"}],"termid":"GO:0035155"}


id: GO:0047395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(sn-glycero-3-phospho)-1D-myo-inositol + H2O = sn-glycerol 3-phosphate + myo-inositol + H+.","definition_xrefs":["EC:3.1.4.44","RHEA:16501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"glycerophosphoinositol glycerophosphodiesterase activity","secondary_identifiers":["KEGG_REACTION:R01193","Reactome:R-HSA-6813740","MetaCyc:3.1.4.44-RXN"],"synonyms":[{"name":"1-(sn-glycero-3-phospho)-1D-myo-inositol glycerophosphohydrolase activity","type":"related"},{"name":"sn-glycero(3)phosphoinositol glycerophosphohydrolase activity","type":"related"},{"name":"sn-glycero-3-phospho-1-inositol glycerophosphohydrolase activity","type":"related"}],"termid":"GO:0047395"}


id: PBO:0090866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane fission complex, WD repeat subunit Mdv1","termid":"PBO:0090866"}


id: MONDO:0005295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A symptom complex characterized by pain and weakness in skeletal muscle group associated with exercise, such as leg pain and weakness brought on by walking. Such muscle limpness disappears after a brief rest and is often relates to arterial stenosis; muscle ischemia; and accumulation of lactate.","definition_xrefs":["MESH:D007383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteriosclerosis disorder","termid":"MONDO:0002277"},{"relation_name":"is_a","term_name":"peripheral vascular disease","termid":"MONDO:0005294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermittent vascular claudication","secondary_identifiers":["SCTID:63491006","DOID:3669","EFO:0003876","ICD9:440.21","MEDGEN:7115","UMLS:C0021775"],"synonyms":[{"name":"Charcot's syndrome","type":"exact"},{"name":"intermittent claudication","type":"exact"}],"termid":"MONDO:0005295","xrefs":{"Monarch":{"xref_id":"0005295"}}}


id: PR:O14120
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mvp1 gene.","definition_xrefs":["UniProtKB:O14120","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin mvp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.06","synonyms":[{"name":"Spom972h-mvp1","type":"exact"}],"termid":"PR:O14120"}


id: GO:1903292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a Golgi membrane.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:11378902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to Golgi apparatus","termid":"GO:0034067"},{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to Golgi membrane","synonyms":[{"name":"protein localisation in Golgi membrane","type":"exact"},{"name":"protein localisation to Golgi membrane","type":"exact"},{"name":"protein localization in Golgi membrane","type":"exact"}],"termid":"GO:1903292"}


id: GO:0035236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the neuropeptide proctolin, to initiate a change in cell activity.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"proctolin receptor activity","termid":"GO:0035236"}


id: MONDO:0015681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pervasive developmental disorder with a disease onset before the age of three and characterized by a dramatic loss of behavioral and developmental functioning after atleast two years of normal development. Manifestations of the disease include loss of speech, incontinence, communication and social interaction problems, stereotypical autistic behaviors and dementia.","definition_xrefs":["Orphanet:168782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pervasive developmental disorder","termid":"MONDO:0000594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"childhood disintegrative disorder","secondary_identifiers":["NCIT:C97164","SCTID:71961003","MedDRA:10008522","GARD:6040","icd11.foundation:1460615954","MEDGEN:472967","DOID:13487","ICD9:299.1","SCTID:61831009","UMLS:C0236791"],"synonyms":[{"name":"childhood disintegrative disease","type":"exact"},{"name":"dementia infantilis","type":"exact"},{"name":"disintegrative psychosis","type":"exact"},{"name":"heller syndrome","type":"exact"},{"name":"heller's syndrome","type":"exact"},{"name":"symbiotic psychosis","type":"exact"}],"termid":"MONDO:0015681","xrefs":{"Monarch":{"xref_id":"0015681"}}}


id: FYPO:0003347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the substrate specificity of a catalytic activity differs from wild type.","definition_xrefs":["PomBase:mah","PMID:23091597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"altered substrate specificity","synonyms":[{"name":"abnormal catalytic activity, altered substrate specificity","type":"exact"}],"termid":"FYPO:0003347"}


id: GO:0022612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a gland are generated and organized.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gland morphogenesis","termid":"GO:0022612"}


id: GO:0009060
data:
  {"annotated_genes":["SJAG_05629","SJAG_03490","SJAG_00866","SJAG_03925","SJAG_MIT09","SJAG_00542","SJAG_07007","SJAG_00438","SJAG_02646","SJAG_07003","SJAG_01524","SJAG_02744","SJAG_07006","SJAG_MIT04","SJAG_01190","SJAG_00601","SJAG_00755","SJAG_02564","SJAG_04843","SJAG_06382","SJAG_01402","SJAG_03813","SJAG_MIT15","SJAG_03114","SJAG_02158","SJAG_03920","SJAG_MIT13","SJAG_02433","SJAG_00698","SJAG_02464","SJAG_01922","SJAG_03163","SJAG_02504","SJAG_01077","SJAG_00260","SJAG_MIT37","SJAG_04122","SJAG_01490","SJAG_03064","SJAG_01671","SJAG_04152","SJAG_MIT20","SJAG_MIT03","SJAG_02598","SJAG_02592","SJAG_01355","SJAG_01763","SJAG_01062","SJAG_01895","SJAG_00080","SJAG_00915","SJAG_03290","SJAG_00976","SJAG_02398","SJAG_02006","SJAG_00836","SJAG_03588","SJAG_00985","SJAG_02105","SJAG_00133","SJAG_05204","SJAG_01753","SJAG_01630"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87746,95342,99360,108959,114623,118860],"is_not":false,"summary":null,"term":"GO:0009060"},{"annotations":[115847,119482,115042,108652,119432,79200,114612,76628,74653,119454,72394],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006123"},{"annotations":[113240],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006120"},{"annotations":[113579,89508,89140,117145],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006121"},{"annotations":[76032,61926,74069,76627,113786,72466,118077,104419,76185,119459],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0006122"},{"annotations":[89453,93610,109156,94198,116233,108264,103377,93183,105366,104021,108172,119469,103995,95181,119463,119475,102158],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042776"},{"annotations":[97957,112258,94707,110060],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903715"},{"annotations":[77169,79637,62885,61772,107101,73515,64628,74512,70720,75698,76163,71156,66523,72129,74677],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006099"}]},"cv_name":"biological_process","definition":"The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which requires oxygen as the terminal electron acceptor.","definition_xrefs":["GOC:jl","ISBN:0140513590","GOC:das"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00133":null,"SJAG_00260":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00601":null,"SJAG_00698":null,"SJAG_00755":null,"SJAG_00836":null,"SJAG_00866":null,"SJAG_00915":null,"SJAG_00976":null,"SJAG_00985":null,"SJAG_01062":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01402":null,"SJAG_01490":null,"SJAG_01524":null,"SJAG_01630":null,"SJAG_01671":null,"SJAG_01753":null,"SJAG_01763":null,"SJAG_01895":null,"SJAG_01922":null,"SJAG_02006":null,"SJAG_02105":null,"SJAG_02158":null,"SJAG_02398":null,"SJAG_02433":null,"SJAG_02464":null,"SJAG_02504":null,"SJAG_02564":null,"SJAG_02592":null,"SJAG_02598":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03064":null,"SJAG_03114":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03490":null,"SJAG_03588":null,"SJAG_03813":null,"SJAG_03920":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04152":null,"SJAG_04843":null,"SJAG_05204":null,"SJAG_05629":null,"SJAG_06382":null,"SJAG_07003":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT09":null,"SJAG_MIT13":null,"SJAG_MIT15":null,"SJAG_MIT20":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"aerobic respiration","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cellular_respiration#Aerobic_respiration","MetaCyc:PWY-3781"],"termid":"GO:0009060","terms_by_termid":{"GO:0006099":null,"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null,"GO:0009060":null,"GO:0042776":null,"GO:1903715":null}}


id: GO:0160119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed cell death process that is induced by intracellular copper accumulation.","definition_xrefs":["PMID:35354936","PMID:35298263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuproptosis","termid":"GO:0160119"}


id: MONDO:0022854
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital unilateral pulmonary hypoplasia","termid":"MONDO:0022854","xrefs":{"Monarch":{"xref_id":"0022854"}}}


id: GO:0046409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: shikimate or quinate ester of p-coumaric acid + NADPH + H+ + O2 = caffeic acid conjugate (caffeoyl shikimic acid or chlorogenic acid) + H2O + NADP+.","definition_xrefs":["PMID:11891223","PMID:11429408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"p-coumarate 3-hydroxylase activity","synonyms":[{"name":"cytochrome P450 CYP98A3","type":"narrow"}],"termid":"GO:0046409"}


id: PBO:0003946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate carboxylase Pyr1","termid":"PBO:0003946"}


id: PBO:0000296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/ transcription initiation factor Taf9","termid":"PBO:0000296"}


id: MONDO:0060714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial tumoral calcinosis","termid":"MONDO:0018891"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"tumoral calcinosis, hyperphosphatemic, familial, 2","secondary_identifiers":["UMLS:C4693863","EFO:0009383","GARD:16281","MEDGEN:1640532","OMIM:617993"],"synonyms":[{"name":"HFTC2","type":"related"},{"name":"tumoral calcinosis, hyperphosphatemic, familial, 2","type":"exact"}],"termid":"MONDO:0060714","xrefs":{"Monarch":{"xref_id":"0060714"}}}


id: MONDO:0011768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myasthenia gravis","termid":"MONDO:0009688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"myasthenia gravis with thymus hyperplasia","secondary_identifiers":["MESH:C564628","UMLS:C1846838","MEDGEN:375982","OMIM:607085"],"synonyms":[{"name":"Myas1","type":"related"},{"name":"myasthenia gravis with thymus hyperplasia","type":"exact"}],"termid":"MONDO:0011768","xrefs":{"Monarch":{"xref_id":"0011768"}}}


id: GO:0060780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the intercalary leaflet attains its shape. An intercalary leaflet is a leaflet that develops between primary leaflets.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaflet morphogenesis","termid":"GO:0060794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intercalary leaflet morphogenesis","termid":"GO:0060780"}


id: PBO:0112978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' DNA helicase involved in error-free bypass of DNA lesions; binds flap DNA, stimulates activity of Rad27p and Dna2p; prevents crossovers between ectopic sequences by removing substrates for Mus81-Mms4 or Rad1-Rad10 cleavage; homolog of human FANCM Fanconi anemia protein that is involved in stabilizing and remodeling blocked replication forks; member of SF2 DExD/H superfamily of helicases; nonsense or missense mutations in FANCM predispose  individuals to breast cancer","termid":"PBO:0112978"}


id: PBO:0058879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10396a","termid":"PBO:0058879"}


id: FYPO:0002794
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the number, distribution, or morphology of all or part of the vacuole(s) is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vacuole","synonyms":[{"name":"abnormal vacuole physical object quality","type":"exact"},{"name":"abnormal vacuoles","type":"exact"}],"termid":"FYPO:0002794"}


id: GO:0003109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of norepinephrine into the bloodstream modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by norepinephrine","termid":"GO:0003061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by circulating norepinephrine","synonyms":[{"name":"increased force of heart contraction by circulating noradrenaline","type":"related"},{"name":"increased force of heart contraction by circulating norepinephrine","type":"exact"}],"termid":"GO:0003109"}


