# terms

id: PBO:0027295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_tetranucleate_vegetative_cell","termid":"PBO:0027295"}


id: PBO:0045279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 30","termid":"PBO:0045279"}


id: GO:0036206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of expression of a histone-encoding gene. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein.","definition_xrefs":["GOC:bf","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone gene expression (obsolete GO:0036206)","synonyms":[{"name":"regulation of expression of histone-encoding gene","type":"exact"}],"termid":"GO:0036206"}


id: GO:1905061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardioblast proliferation.","definition_xrefs":["GOC:bc","GOC:BHF","GOC:TermGenie","PMID:24236097","GO_REF:0000058","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast proliferation","termid":"GO:0003264"},{"relation_name":"is_a","term_name":"negative regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000137"},{"relation_name":"negatively_regulates","term_name":"cardioblast proliferation","termid":"GO:0003263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardioblast proliferation","synonyms":[{"name":"down regulation of cardioblast proliferation","type":"exact"},{"name":"down-regulation of cardioblast proliferation","type":"exact"},{"name":"downregulation of cardioblast proliferation","type":"exact"},{"name":"inhibition of cardioblast proliferation","type":"narrow"}],"termid":"GO:1905061"}


id: GO:0140028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a transient pore in the plasma membrane and the attached contractile vacuolar membrane, to release water from the cell. This process does not involve fusion of the two membranes.","definition_xrefs":["Wikipedia:Exocytosis","PMID:22323285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"contractile vacuole discharge","termid":"GO:0070177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"pore formation during contractile vacuole discharge","termid":"GO:0140028"}


id: SO:0001447
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar amino acid encoded by the codons TGT and TGC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine","synonyms":[{"name":"C","type":"exact"},{"name":"Cys","type":"exact"}],"termid":"SO:0001447"}


id: MONDO:0011804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune lymphoproliferative syndrome (ALPS) with recurrent viral infections is a rare genetic disorder characterized by lymphadenopathy and/or splenomegaly and recurrent infections due to herpes viruses.","definition_xrefs":["Orphanet:275517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune lymphoproliferative syndrome","termid":"MONDO:0017979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune lymphoproliferative syndrome type 2B","secondary_identifiers":["NANDO:2200740","OMIM:607271","SCTID:722290008","DOID:0110116","GARD:9796","MEDGEN:339548","UMLS:C1846545"],"synonyms":[{"name":"ALPS with recurrent viral infections","type":"exact"},{"name":"ALPS2B","type":"exact"},{"name":"CASP8 autoimmune lymphoproliferative syndrome","type":"exact"},{"name":"CEDS","type":"exact"},{"name":"Ceds","type":"related"},{"name":"autoimmune lymphoproliferative syndrome caused by mutation in CASP8","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome type IIB","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome with recurrent viral infections","type":"exact"},{"name":"autoimmune lymphoproliferative syndrome, type 2B","type":"related"},{"name":"autoimmune lymphoproliferative syndrome, type IIB","type":"exact"},{"name":"caspase 8 deficiency","type":"exact"},{"name":"caspase 8 deficiency syndrome","type":"exact"},{"name":"caspase eight deficiency state","type":"exact"},{"name":"caspase-8 deficiency","type":"related"}],"termid":"MONDO:0011804","xrefs":{"Monarch":{"xref_id":"0011804"}}}


id: GO:1990876
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side of the nuclear pore complex (NPC) that faces the cytoplasm.","definition_xrefs":["PMID:8422679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005643","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of nuclear pore","synonyms":[{"name":"cytoplasmic side of NPC","type":"exact"},{"name":"cytoplasmic side of nuclear pore complex","type":"exact"},{"name":"cytoplasmic side of nucleopore","type":"exact"}],"termid":"GO:1990876"}


id: MONDO:0006970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A concretion in the salivary gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland disorder","termid":"MONDO:0001142"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialolithiasis","secondary_identifiers":["ICD10CM:K11.5","MedDRA:10040631","icd11.foundation:1984849248","EFO:1001180","ICD9:527.5","DOID:12905","MESH:D015494","SCTID:28826002","UMLS:C0036091","MEDGEN:48536"],"synonyms":[{"name":"Stone of salivary gland or duct","type":"exact"},{"name":"salivary gland Stone","type":"exact"},{"name":"sialolith","type":"exact"}],"termid":"MONDO:0006970","xrefs":{"Monarch":{"xref_id":"0006970"}}}


id: FYPO:0000866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"abnormal histone H3-K9 dimethylation during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K9 dimethylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me2 during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000866"}


id: FYPO:0007364
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyruvate kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal pyruvate kinase activity","termid":"FYPO:0007363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000654"],"is_obsolete":false,"name":"increased pyruvate kinase activity","termid":"FYPO:0007364"}


id: MOD:01050
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridyl alanyl","termid":"MOD:01050"}


id: GO:0018210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-threonine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine modification","termid":"GO:0018210"}


id: PBO:0066475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"riboflavin kinase pseudogene 2","termid":"PBO:0066475"}


id: PBO:0001410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Pap1/Caf3","termid":"PBO:0001410"}


id: PBO:0053196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper and EF-hand containing transmembrane protein 2","termid":"PBO:0053196"}


id: GO:0050904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The passage of a leukocyte between the tight junctions of endothelial cells lining blood vessels, typically the fourth and final step of cellular extravasation.","definition_xrefs":["PMID:7507411","PMID:8600538","PMID:14680625","PMID:14708592","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"},{"relation_name":"part_of","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diapedesis","termid":"GO:0050904"}


id: PBO:0061430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group H member 3","termid":"PBO:0061430"}


id: PBO:0065065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteoglycan 3, pro eosinophil major basic protein 2","termid":"PBO:0065065"}


id: PBO:0070495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 30","termid":"PBO:0070495"}


id: MONDO:0015259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly-mesomelia-intellectual disability-heart defects syndrome is a rare, genetic, multiple congenital anomalies/dysmorphic syndrome characterized by developmental delay, intellectual disability, thin habitus with narrow shoulders, mesomelic shortness of the arms, craniofacial dysmorphism (e.g. long lower face, maxillary hypoplasia, beak nose, short columella, prognathia, high arched palate, obtuse mandibular angle), brachydactyly (mostly involving middle phalanges) and cardiovascular anomalies (i.e. aortic root dilatation, mitral valve prolapse).","definition_xrefs":["Orphanet:1277"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly-mesomelia-intellectual disability-heart defects syndrome","secondary_identifiers":["GARD:5036","MEDGEN:1645467","UMLS:C4707567"],"synonyms":[{"name":"Stratton-Garcia-Young syndrome","type":"exact"},{"name":"brachydactyly mesomelia intellectual disability aortic dilatation mitral valve prolapse and characteristic face","type":"related"},{"name":"brachydactyly mesomelia mental retardation aortic dilatation mitral valve prolapse and characteristic face","type":"related"}],"termid":"MONDO:0015259","xrefs":{"Monarch":{"xref_id":"0015259"}}}


id: PBO:0066423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retention in endoplasmic reticulum sorting receptor 1","termid":"PBO:0066423"}


id: MONDO:0019294
data:
  {"annotated_genes":["SJAG_03846","SJAG_04008","SJAG_03199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007145"},{"annotations":[86290,86291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024552"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03199":null,"SJAG_03846":null,"SJAG_04008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"mixed dermis disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79380","MEDGEN:1842502","UMLS:C5681484"],"termid":"MONDO:0019294","terms_by_termid":{"MONDO:0007145":null,"MONDO:0024552":null},"xrefs":{"Monarch":{"xref_id":"0019294"}}}


id: PBO:0040039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic residue methyltransferase 1","termid":"PBO:0040039"}


id: FYPO:0007205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at sites within the eukaryotic rDNA repeat spacer is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal replication fork arrest","termid":"FYPO:0008191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal replication fork arrest at rDNA repeats","synonyms":[{"name":"normal replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"normal replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"normal replication fork arrest at ribosomal DNA repeats","type":"exact"}],"termid":"FYPO:0007205"}


id: PBO:0068320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 19B pseudogene X-linked","termid":"PBO:0068320"}


id: MONDO:0011151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"LRP5-related exudative vitreoretinopathy","termid":"MONDO:0700228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"exudative vitreoretinopathy 4","secondary_identifiers":["DOID:0111411","MESH:C566619","OMIM:601813","UMLS:C1866176","MEDGEN:356171","GARD:15337"],"synonyms":[{"name":"EVR4","type":"related"},{"name":"exudative vitreoretinopathy 4","type":"exact"},{"name":"exudative vitreoretinopathy type 4","type":"exact"}],"termid":"MONDO:0011151","xrefs":{"Monarch":{"xref_id":"0011151"}}}


id: GO:0089717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of a membrane consisting of gene products and protein complexes that have some part that spans both leaflets of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete spanning component of membrane (obsolete GO:0089717)","termid":"GO:0089717"}


id: GO:0071543
data:
  {"annotated_genes":["SJAG_04870","SJAG_01154"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79536,105551],"is_not":false,"summary":null,"term":"GO:0071543"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a diphosphoinositol polyphosphate, 1,2,3,4,5,6-cyclohexanehexol with one or more diphosphate groups and multiple monophosphate groups attached.","definition_xrefs":["GOC:mah","PMID:12387729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate metabolic process","termid":"GO:0043647"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"diphosphoinositol polyphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"diphosphoinositol polyphosphate metabolism","type":"exact"}],"termid":"GO:0071543","terms_by_termid":{"GO:0071543":null}}


id: GO:0023006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an amino acid signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by amino acid (obsolete GO:0023006)","synonyms":[{"name":"signal initiation by amino acid","type":"exact"}],"termid":"GO:0023006"}


id: PBO:0034267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_latent_homology_relationship_with","termid":"PBO:0034267"}


id: GO:0002418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune system process that functions in the response of an organism to a tumor cell.","definition_xrefs":["PMID:16730260","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor cell","termid":"GO:0002347"},{"relation_name":"is_a","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response to tumor cell","termid":"GO:0002418"}


id: GO:0075511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral-induced lysis of the macropinosome involved in the uptake of a virus into a host cell. Occurs after internalization of the virus in a macropinosome, and results in the release of viral contents from the macropinosome into the host cell cytoplasm.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysis of host organelle involved in viral entry into host cell","termid":"GO:0039664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macropinosome lysis involved in viral entry into host cell","termid":"GO:0075511"}


id: GO:0102359
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + 7,8-dihydroxycoumarin = UDP + 4-O- beta -D-glucosyl-daphnetin + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete daphnetin 4-O-beta-glucosyltransferase activity (obsolete GO:0102359)","termid":"GO:0102359"}


id: PR:O74493
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC285.05 gene.","definition_xrefs":["UniProtKB:O74493","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine nucleoside permease C285.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.05","synonyms":[{"name":"Spom972h-SPCC285.05","type":"exact"}],"termid":"PR:O74493"}


id: PBO:0066037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 6","termid":"PBO:0066037"}


id: GO:0007323
data:
  {"annotated_genes":["SJAG_05016","SJAG_04398","SJAG_04923","SJAG_00730"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71686,89890],"is_not":false,"summary":null,"term":"GO:0007323"},{"annotations":[88157,93511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071432"}]},"cv_name":"biological_process","definition":"The generation of a mature, active peptide pheromone via processes unique to its processing and modification. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00730":null,"SJAG_04398":null,"SJAG_04923":null,"SJAG_05016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"peptide pheromone maturation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0007324","GO:0007326","GO:0046613"],"synonyms":[{"name":"pheromone processing","type":"exact"}],"termid":"GO:0007323","terms_by_termid":{"GO:0007323":null,"GO:0071432":null}}


id: MONDO:0024315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the epicondyles by a parasite.","definition_xrefs":["NCIT:C34587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endophthalmitis","termid":"MONDO:0016047"},{"relation_name":"is_a","term_name":"parasitic eye infection","termid":"MONDO:0020947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"parasitic endophthalmitis","secondary_identifiers":["SCTID:57100005","ICD9:360.13","icd11.foundation:935014361","MEDGEN:4954","UMLS:C0014238"],"synonyms":[{"name":"parasitic endophthalmitis","type":"exact"}],"termid":"MONDO:0024315","xrefs":{"Monarch":{"xref_id":"0024315"}}}


id: PBO:0034760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase regulatory subunit Dpm2 (predicted)","termid":"PBO:0034760"}


id: FYPO:0003346
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination is abnormal at the silent mating-type cassettes. Meiotic recombination is a cellular process in which double strand breaks are formed and repaired through a double Holliday junction intermediate, resulting in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes.","definition_xrefs":["PomBase:mah","GO:0007131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiotic recombination at silent mating-type cassette","synonyms":[{"name":"DNA recombination defects, meiotic, at silent mating-type cassette","type":"exact"},{"name":"abnormal meiotic DNA recombination at silent mating-type cassette","type":"exact"},{"name":"abnormal meiotic recombination at mating-type region heterochromatin","type":"exact"},{"name":"abnormal reciprocal meiotic recombination at silent mating-type cassette","type":"exact"},{"name":"abnormal recombination at silent mating-type cassette","type":"broad"}],"termid":"FYPO:0003346"}


id: MOD:01214
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative - OBSOLETE because redundant, the difference component of MOD:01060. Remap to MOD:01060.","definition_xrefs":["PubMed:10504701","PubMed:11510821","Unimod:4#C","PubMed:12422359"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01214 iodoacetamide - site C (obsolete MOD:01214)","synonyms":[{"name":"Carbamidomethyl","type":"related"},{"name":"Iodoacetamide derivative","type":"related"}],"termid":"MOD:01214"}


id: GO:0042025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle as it is found in the host cell in which chromosomes are housed and replicated. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nucleus","secondary_identifiers":["GO:0033649"],"termid":"GO:0042025"}


id: PBO:0113475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of tRNA-specific adenosine-34 deaminase; forms a heterodimer with Tad2p that converts adenosine to inosine at the wobble position of several tRNAs; localizes to cytosol, nucleus and peroxisomes","termid":"PBO:0113475"}


id: MONDO:0001209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A wart caused by human papillomavirus. It can appear anywhere on the skin.","definition_xrefs":["NCIT:C27087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"},{"relation_name":"is_a","term_name":"benign epithelial skin neoplasm","termid":"MONDO:0024666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"common wart","secondary_identifiers":["MESH:D014860","UMLS:C3665596","DOID:11165","ICD9:078.1","EFO:0009662","ICD9:078.10","MEDGEN:777120","ICD9:078.19","SCTID:57019003"],"synonyms":[{"name":"common wart","type":"exact"},{"name":"verruca vulgaris","type":"exact"},{"name":"viral Warts","type":"related"},{"name":"viral Warts due to papilloma virus","type":"related"},{"name":"viral wart","type":"related"},{"name":"wart","type":"related"}],"termid":"MONDO:0001209","xrefs":{"Monarch":{"xref_id":"0001209"}}}


id: FYPO:0003841
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is decreased. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GO:1902967","GO:1990023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle","termid":"FYPO:0002825"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle midzone","termid":"FYPO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle midzone","synonyms":[{"name":"decreased protein localisation to mitotic spindle midzone","type":"exact"},{"name":"decreased protein localization to mitotic spindle midzone during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to spindle midzone during mitosis","type":"exact"},{"name":"decreased protein localization to spindle midzone during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle midzone","type":"exact"}],"termid":"FYPO:0003841"}


id: GO:0019547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including ornithine.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete arginine catabolic process to ornithine (obsolete GO:0019547)","synonyms":[{"name":"arginine breakdown to ornithine","type":"exact"},{"name":"arginine degradation to ornithine","type":"exact"}],"termid":"GO:0019547"}


id: GO:0060747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A parental behavior in which fertilized eggs are taken into the mouth and held until hatching.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parental behavior","termid":"GO:0060746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oral incubation","termid":"GO:0060747"}


id: PBO:0070520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 19","termid":"PBO:0070520"}


id: MONDO:0007291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial cerebral cavernous malformation (obsolete MONDO:0007291)","termid":"MONDO:0007291","xrefs":{"Monarch":{"xref_id":"0007291"}}}


id: GO:0000077
data:
  {"annotated_genes":["SJAG_05373","SJAG_00327","SJAG_02771","SJAG_02026","SJAG_00364","SJAG_01205","SJAG_00623","SJAG_00640","SJAG_01044","SJAG_02266","SJAG_01680","SJAG_01429","SJAG_01855","SJAG_04287","SJAG_03160","SJAG_01677","SJAG_03026","SJAG_03898","SJAG_00486","SJAG_04332","SJAG_04671","SJAG_01708","SJAG_04280","SJAG_02576","SJAG_00169","SJAG_03942","SJAG_01146","SJAG_01084","SJAG_03048","SJAG_03529","SJAG_01873","SJAG_02098","SJAG_01605","SJAG_00429","SJAG_03720","SJAG_04140","SJAG_02563"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114853,116393,116620,80336,78338,93892,111574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[110040,91635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[118104,106983,75599,79746,92123,89444,90535,99692,117409,72808,112106,101389,91759,109686,100879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[102700,79751,112415,96344,91760,106984,74257,89490,99693,79147,89445,79519,112107,116450,90771,74779,108028,94874,101197],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a DNA damage checkpoint.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA integrity checkpoint signaling","termid":"GO:0031570"},{"relation_name":"is_a","term_name":"signal transduction in response to DNA damage","termid":"GO:0042770"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01044":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03529":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0007049"],"is_obsolete":false,"name":"DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:DNA_damage_checkpoint","Wikipedia:Postreplication_checkpoint","GO:0072422"],"synonyms":[{"name":"DNA damage checkpoint","type":"exact"},{"name":"DNA damage response, signal transduction resulting in cell cycle arrest","type":"narrow"},{"name":"signal transduction involved in DNA damage checkpoint","type":"exact"}],"termid":"GO:0000077","terms_by_termid":{"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0044773":null}}


id: GO:0008301
data:
  {"annotated_genes":["SJAG_04036","SJAG_05153","SJAG_04855","SJAG_00247","SJAG_04009"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90418,115414],"is_not":false,"summary":null,"term":"GO:0008301"},{"annotations":[102623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110035"},{"annotations":[107421,109182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044377"}]},"cv_name":"molecular_function","definition":"The activity of binding selectively and non-covalently to and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.","definition_xrefs":["PMID:19037758","GOC:vw","PMID:10710711","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04855":null,"SJAG_05153":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"DNA binding, bending","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA bending activity","type":"exact"},{"name":"DNA bending involving DNA binding","type":"exact"}],"termid":"GO:0008301","terms_by_termid":{"GO:0008301":null,"GO:0044377":null,"GO:0110035":null}}


id: GO:1901424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toluene stimulus.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to toluene","termid":"GO:1901424"}


id: PBO:0062632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 13 pseudogene","termid":"PBO:0062632"}


id: PBO:0001258
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Prr1","termid":"PBO:0001258"}


id: GO:0007602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequence of reactions within a cell required to convert absorbed photons into a molecular signal.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"is_a","term_name":"detection of light stimulus","termid":"GO:0009583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phototransduction","secondary_identifiers":["Wikipedia:Visual_phototransduction"],"synonyms":[{"name":"opsin","type":"related"},{"name":"phototransduction, visible light, light adaptation","type":"narrow"},{"name":"phototrophin mediated phototransduction","type":"narrow"}],"termid":"GO:0007602"}


id: PATO:0000835
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000835 auditory acuity value (obsolete PATO:0000835)","termid":"PATO:0000835"}


id: GO:0051330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA segregation by meiosis and the beginning of DNA synthesis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G1 phase","termid":"GO:0051318"},{"relation_name":"part_of","term_name":"meiotic interphase","termid":"GO:0051328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051328"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051328"],"is_obsolete":false,"name":"meiotic G1 phase","synonyms":[{"name":"G1 phase of meiotic cell cycle","type":"exact"}],"termid":"GO:0051330"}


id: GO:0016816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in substances other than amides, amidines and nitriles.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in other compounds (obsolete GO:0016816)","synonyms":[{"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in other compounds","type":"exact"}],"termid":"GO:0016816"}


id: GO:0110095
data:
  {"annotated_genes":["SJAG_01457","SJAG_05256","SJAG_02960","SJAG_02010"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113117],"is_not":false,"summary":null,"term":"GO:0110095"},{"annotations":[105404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140041"},{"annotations":[95868,78489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046294"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of an aldehyde. These may include transport of aldehydes away from sensitive areas and to compartments or complexes whose purpose is sequestration of the toxic substance.","definition_xrefs":["PMID:25656103","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"},{"relation_name":"part_of","term_name":"cellular response to aldehyde","termid":"GO:0110096"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_02010":null,"SJAG_02960":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular detoxification of aldehyde","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0110095","terms_by_termid":{"GO:0046294":null,"GO:0110095":null,"GO:0140041":null}}


id: PBO:0036255
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COQ2","termid":"PBO:0036255"}


id: PBO:0050675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 2","termid":"PBO:0050675"}


id: PBO:0058609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6741","termid":"PBO:0058609"}


id: SO:0002389
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where the stop codon of an upstream open reading frame is lost.","definition_xrefs":["PMID:32926138","PMID:32461616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_uORF_stop_codon_variant","termid":"SO:0002386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_stop_codon_loss_variant","synonyms":[{"name":"uSTOP_lost","type":"exact"}],"termid":"SO:0002389"}


id: PBO:0066231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 39","termid":"PBO:0066231"}


id: PBO:0001095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein Ubx3, Cdc48 cofactor","termid":"PBO:0001095"}


id: PBO:0049613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 16","termid":"PBO:0049613"}


id: GO:1903098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of the formation of nucleosomes containing the histone H3 variant CENP-A to form centromeric chromatin. This specialised chromatin occurs at centromeric region in point centromeres, and the central core in modular centromeres.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24710126"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of CENP-A containing nucleosome assembly (obsolete GO:1903098)","synonyms":[{"name":"down regulation of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"down regulation of CENP-A deposition","type":"related"},{"name":"down regulation of CENP-A loading","type":"related"},{"name":"down regulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"down regulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"down regulation of centromere specific nucleosome exchange","type":"related"},{"name":"down regulation of centromere-specific histone exchange","type":"exact"},{"name":"down regulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"down regulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"down-regulation of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"down-regulation of CENP-A deposition","type":"related"},{"name":"down-regulation of CENP-A loading","type":"related"},{"name":"down-regulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"down-regulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"down-regulation of centromere specific nucleosome exchange","type":"related"},{"name":"down-regulation of centromere-specific histone exchange","type":"exact"},{"name":"down-regulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"down-regulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"downregulation of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"downregulation of CENP-A deposition","type":"related"},{"name":"downregulation of CENP-A loading","type":"related"},{"name":"downregulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"downregulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"downregulation of centromere specific nucleosome exchange","type":"related"},{"name":"downregulation of centromere-specific histone exchange","type":"exact"},{"name":"downregulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"downregulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"},{"name":"inhibition of CENP-A containing nucleosome assembly at centromere","type":"narrow"},{"name":"inhibition of CENP-A deposition","type":"related"},{"name":"inhibition of CENP-A loading","type":"related"},{"name":"inhibition of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"inhibition of DNA replication-independent nucleosome assembly at centromere","type":"narrow"},{"name":"inhibition of centromere specific nucleosome exchange","type":"related"},{"name":"inhibition of centromere-specific histone exchange","type":"narrow"},{"name":"inhibition of centromere-specific nucleosome assembly","type":"narrow"},{"name":"inhibition of centromeric DNA replication-independent nucleosome assembly","type":"narrow"},{"name":"negative regulation of CENP-A deposition","type":"related"},{"name":"negative regulation of CENP-A loading","type":"related"},{"name":"negative regulation of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"negative regulation of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"negative regulation of centromere specific nucleosome exchange","type":"related"},{"name":"negative regulation of centromere-specific histone exchange","type":"exact"},{"name":"negative regulation of centromere-specific nucleosome assembly","type":"exact"},{"name":"negative regulation of centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"GO:1903098"}


id: MONDO:1010979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydranencephaly that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydranencephaly, non-human animal","termid":"MONDO:1010232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydranencephaly, dog","secondary_identifiers":["OMIA:000486-9615"],"termid":"MONDO:1010979","xrefs":{"Monarch":{"xref_id":"1010979"}}}


id: PBO:0048876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member B","termid":"PBO:0048876"}


id: PBO:0074764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 1B","termid":"PBO:0074764"}


id: GO:2000215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of proline metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of proline metabolic process","termid":"GO:2000214"},{"relation_name":"negatively_regulates","term_name":"proline metabolic process","termid":"GO:0006560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of proline metabolic process","synonyms":[{"name":"negative regulation of proline metabolism","type":"exact"}],"termid":"GO:2000215"}


id: PBO:0045274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 25","termid":"PBO:0045274"}


id: MONDO:0044284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. The Gerbich blood group system contains 6 high-prevalence and 5 low-prevalence antigens that are expressed on glycophorin C (GPC), glycophorin D (GPD), or both GPC and GPD. GPC and GPD, which contribute stability to the red blood cell membrane, are encoded by the same gene, GYPC, through the use of alternative translational start sites. Deficiency of GPC and GPD is associated with hereditary elliptocytosis, and Gerbich antigens act as receptors for the malarial parasite Plasmodium falciparum (see OMIM:611162). The Gerbich antibodies anti-Ge2 and anti-Ge3 have caused hemolytic transfusion reactions, and anti-Ge3 has produced hemolytic disease of the fetus and newborn (review by {12:Walker and Reid, 2010}).","definition_xrefs":["OMIM:616089"],"gene_count":0,"genotype_count":0,"name":"obsolete blood group, gerbich system (obsolete MONDO:0044284)","synonyms":[{"name":"GE","type":"related"},{"name":"Gerbich blood Group system","type":"related"},{"name":"blood group, Gerbich","type":"exact"},{"name":"blood group, Gerbich system","type":"related"}],"termid":"MONDO:0044284","xrefs":{"Monarch":{"xref_id":"0044284"}}}


id: GO:0032454
data:
  {"annotated_genes":["SJAG_03041","SJAG_03664","SJAG_02401","SJAG_03997"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70800,118151],"is_not":false,"summary":null,"term":"GO:0032454"},{"annotations":[103573,94415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue at position 9 of the histone H3 protein.","definition_xrefs":["PMID:16362057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02401":null,"SJAG_03041":null,"SJAG_03664":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0032452"}],"interesting_parent_ids":["GO:0032452","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"histone H3K9 demethylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-997263","Reactome:R-HSA-9011949","Reactome:R-HSA-9011985"],"synonyms":[{"name":"histone H3-K49 demethylase activity","type":"exact"},{"name":"histone H3-methyl-lysine-9 demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0032454","terms_by_termid":{"GO:0032454":null,"GO:0140683":null}}


id: GO:0015126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The directed movement of bile acid and bile salts out of a hepatocyte and into the bile canaliculus by means of an agent such as a transporter or pore. Bile canaliculi are the thin tubes formed by hepatocyte membranes. Bile acids are any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid transmembrane transporter activity","termid":"GO:0015125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"canalicular bile acid transmembrane transporter activity","termid":"GO:0015126"}


id: PBO:0068040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 345","termid":"PBO:0068040"}


id: GO:0035861
data:
  {"annotated_genes":["SJAG_02294","SJAG_03722","SJAG_01680","SJAG_00727","SJAG_00640","SJAG_03941","SJAG_01698","SJAG_04816","SJAG_01533","SJAG_04183","SJAG_04142","SJAG_02990","SJAG_01644","SJAG_01677","SJAG_01429","SJAG_04791","SJAG_04190","SJAG_01205","SJAG_01605","SJAG_02460","SJAG_01648","SJAG_05295","SJAG_03454","SJAG_01410","SJAG_02828","SJAG_05372","SJAG_02200","SJAG_05196","SJAG_05232","SJAG_03906","SJAG_05012","SJAG_00250","SJAG_03923","SJAG_02545","SJAG_02708","SJAG_03855","SJAG_01486","SJAG_03898","SJAG_03680","SJAG_00399","SJAG_03780","SJAG_04239","SJAG_02521","SJAG_02771","SJAG_01076","SJAG_05373","SJAG_02098","SJAG_02079","SJAG_01708","SJAG_02575","SJAG_01832","SJAG_00757","SJAG_01849","SJAG_01573","SJAG_03615","SJAG_02072","SJAG_01419","SJAG_02616","SJAG_03026","SJAG_05239"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71517,72097,74642,75596,75616,77486,78313,79142,79744,88952,89483,89613,89916,90524,90608,91755,91863,93003,93988,94267,96339,96505,96846,97243,97449,97479,97749,99293,99384,99520,100920,100950,100982,101388,103159,103239,103297,103669,104395,104494,104564,104766,108018,108109,108153,109682,111193,111593,111882,111924,112100,112896,114667,116637,116902,117184,117594,117688,118110,119112],"is_not":false,"summary":null,"term":"GO:0035861"}]},"cv_name":"cellular_component","definition":"A region of a chromosome at which a DNA double-strand break has occurred. DNA damage signaling and repair proteins accumulate at the lesion to respond to the damage and repair the DNA to form a continuous DNA helix.","definition_xrefs":["PMID:20096808","PMID:21035408","GOC:mah","GOC:bf","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site of DNA damage","termid":"GO:0090734"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00250":null,"SJAG_00399":null,"SJAG_00640":null,"SJAG_00727":null,"SJAG_00757":null,"SJAG_01076":null,"SJAG_01205":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01429":null,"SJAG_01486":null,"SJAG_01533":null,"SJAG_01573":null,"SJAG_01605":null,"SJAG_01644":null,"SJAG_01648":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01832":null,"SJAG_01849":null,"SJAG_02072":null,"SJAG_02079":null,"SJAG_02098":null,"SJAG_02200":null,"SJAG_02294":null,"SJAG_02460":null,"SJAG_02521":null,"SJAG_02545":null,"SJAG_02575":null,"SJAG_02616":null,"SJAG_02708":null,"SJAG_02771":null,"SJAG_02828":null,"SJAG_02990":null,"SJAG_03026":null,"SJAG_03454":null,"SJAG_03615":null,"SJAG_03680":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03855":null,"SJAG_03898":null,"SJAG_03906":null,"SJAG_03923":null,"SJAG_03941":null,"SJAG_04142":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04239":null,"SJAG_04791":null,"SJAG_04816":null,"SJAG_05012":null,"SJAG_05196":null,"SJAG_05232":null,"SJAG_05239":null,"SJAG_05295":null,"SJAG_05372":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"site of double-strand break","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA damage foci","type":"related"},{"name":"DNA damage focus","type":"related"},{"name":"IRIF","type":"related"},{"name":"ionizing radiation-induced foci","type":"related"},{"name":"site of DSB","type":"exact"}],"termid":"GO:0035861","terms_by_termid":{"GO:0035861":null}}


id: PBO:0048931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi phosphoprotein 3","termid":"PBO:0048931"}


id: PBO:0027011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_positive_regulation_of_protein_kinase_activity","termid":"PBO:0027011"}


id: MONDO:0015601
data:
  {"annotated_genes":["SJAG_05239"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86249],"is_not":false,"summary":null,"term":"MONDO:0015601"}]},"cv_name":"mondo","definition":"X-linked intellectual deficit, Van Esch type is characterized by mild to moderate intellectual deficit associated with low birth weight, short stature, microcephaly and variable hypergonadotropic hypogonadism.","definition_xrefs":["Orphanet:163976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05239":null},"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, van Esch type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4305072","OMIM:301030","DOID:0111840","GARD:17008","MEDGEN:930741","SCTID:718914002"],"synonyms":[{"name":"VEODS","type":"exact"},{"name":"Van Esch-O'Driscoll syndrome","type":"exact"},{"name":"Van Esch-O'Driscoll syndrome, X-linked recessive","type":"exact"},{"name":"mental retardation, X-Linked, syndromic, Van Esch-O'Driscoll type","type":"exact"}],"termid":"MONDO:0015601","terms_by_termid":{"MONDO:0015601":null},"xrefs":{"Monarch":{"xref_id":"0015601"}}}


id: GO:0070047
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, and syntaxin 4 (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-4 complex","synonyms":[{"name":"SNARE complex (Stx4, Snap25, Vamp2)","type":"narrow"},{"name":"Stx4-Snap25-Vamp2 complex","type":"narrow"}],"termid":"GO:0070047"}


id: PBO:0003262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc25 family phosphatase Ibp1","termid":"PBO:0003262"}


id: RO:0000058
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a generically dependent continuant and a specifically dependent continuant, in which the generically dependent continuant depends on some independent continuant in virtue of the fact that the specifically dependent continuant also depends on that same independent continuant. A generically dependent continuant may be concretized as multiple specifically dependent continuants.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_concretized_as","termid":"RO:0000058"}


id: PBO:0116621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 1","termid":"PBO:0116621"}


id: GO:0034734
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that forms part of the TFIIIC complex, observed in human. The complex is poorly characterized, but contains the 250-kDa form of HsBdp1, and is thought to include nuclear factor 1 (NF1). It stimulates binding by human TFIIIC2 and is required for transcription activity.","definition_xrefs":["PMID:15096501","PMID:11433012","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"},{"relation_name":"part_of","term_name":"transcription factor TFIIIC complex","termid":"GO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIIC1 complex","termid":"GO:0034734"}


id: SO:0001676
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An A box within an RNA polymerase III type 2 promoter.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"A_box","termid":"SO:0000619"},{"relation_name":"part_of","term_name":"RNApol_III_promoter_type_2","termid":"SO:0000618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_box_type_2","synonyms":[{"name":"A box type 2","type":"related"}],"termid":"SO:0001676"}


id: GO:0090084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of inclusion body assembly. Inclusion body assembly is the aggregation, arrangement and bonding together of a set of components to form an inclusion body.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of inclusion body assembly","termid":"GO:0090083"},{"relation_name":"negatively_regulates","term_name":"inclusion body assembly","termid":"GO:0070841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of inclusion body assembly","termid":"GO:0090084"}


id: MONDO:0013643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial juvenile hyperuricemic nephropathy","termid":"MONDO:0000608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hyperuricemic nephropathy, familial juvenile type 3","secondary_identifiers":["UMLS:C3280216","OMIM:614227","MEDGEN:481846"],"synonyms":[{"name":"HNFJ3","type":"exact"},{"name":"hyperuricemic nephropathy, familial juvenile, 3","type":"related"}],"termid":"MONDO:0013643","xrefs":{"Monarch":{"xref_id":"0013643"}}}


id: PBO:0054352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1745","termid":"PBO:0054352"}


id: PBO:0055527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2961","termid":"PBO:0055527"}


id: GO:0050858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a B- or T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050854"},{"relation_name":"negatively_regulates","term_name":"antigen receptor-mediated signaling pathway","termid":"GO:0050851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of antigen receptor-mediated signaling pathway","synonyms":[{"name":"down regulation of antigen receptor-mediated signaling pathway","type":"exact"},{"name":"down-regulation of antigen receptor-mediated signaling pathway","type":"exact"},{"name":"downregulation of antigen receptor-mediated signaling pathway","type":"exact"},{"name":"inhibition of antigen receptor-mediated signaling pathway","type":"narrow"},{"name":"negative regulation of antigen receptor mediated signalling pathway","type":"exact"}],"termid":"GO:0050858"}


id: FYPO:0006164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to linear element","termid":"FYPO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to linear element","synonyms":[{"name":"decreased protein localisation to linear element","type":"exact"},{"name":"reduced protein localization to linear element","type":"exact"}],"termid":"FYPO:0006164"}


id: MONDO:0004177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal growth of the cells of the urethra (lower urinary tract) without malignant characteristics.","definition_xrefs":["NCIT:C3619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign urinary system neoplasm","termid":"MONDO:0004180"},{"relation_name":"is_a","term_name":"urethra neoplasm","termid":"MONDO:0021239"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign urethral neoplasm","secondary_identifiers":["DOID:730","UMLS:C0154019","MEDGEN:57812","ICD9:223.81","SCTID:92466006"],"synonyms":[{"name":"benign neoplasm of the urethra","type":"exact"},{"name":"benign neoplasm of urethra","type":"exact"},{"name":"benign tumor of the urethra","type":"exact"},{"name":"benign tumor of urethra","type":"exact"},{"name":"benign tumour of the urethra","type":"exact"},{"name":"benign tumour of urethra","type":"exact"},{"name":"benign urethra neoplasm","type":"exact"},{"name":"benign urethra tumor","type":"exact"},{"name":"benign urethra tumour","type":"exact"},{"name":"benign urethral neoplasm","type":"exact"},{"name":"benign urethral tumor","type":"exact"},{"name":"benign urethral tumour","type":"exact"},{"name":"neoplasm. urethra","type":"exact"},{"name":"urethra benign neoplasm","type":"exact"},{"name":"urethral benign neoplasm","type":"related"}],"termid":"MONDO:0004177","xrefs":{"Monarch":{"xref_id":"0004177"}}}


id: GO:0044009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of virions by means of an organism (often an insect or other animal) in order to create new infection.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete viral transmission by vector (obsolete GO:0044009)","termid":"GO:0044009"}


id: FYPO:0006597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cell wall organization RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Cell wall organization RNAs are transcribed from genes whose products are involved in assembly, alteration, or disassembly of the cell wall.","definition_xrefs":["PMID:29878109","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased level of cell wall organization gene mRNA during vegetative growth","synonyms":[{"name":"increased cell wall organization gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of cell wall organization gene RNA during vegetative growth","type":"exact"},{"name":"increased level of cell wall organization gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of cell wall organization gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of cell wall remodeling gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0006597"}


id: FYPO:0002428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of germinated spores with elongated germ tubes and vegetative cells of normal size and shape. The vegetative cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including germinated spores with elongated germ tubes and cells with normal morphology (obsolete FYPO:0002428)","termid":"FYPO:0002428"}


id: GO:0045226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of polysaccharides used in extracellular structures.","definition_xrefs":["GOC:go_curators","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete extracellular polysaccharide biosynthetic process (obsolete GO:0045226)","synonyms":[{"name":"extracellular polysaccharide anabolism","type":"exact"},{"name":"extracellular polysaccharide biosynthesis","type":"exact"},{"name":"extracellular polysaccharide formation","type":"exact"},{"name":"extracellular polysaccharide synthesis","type":"exact"}],"termid":"GO:0045226"}


id: MOD:01617
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(6-phosphomannosyl)-L-threonine.","definition_xrefs":["PubMed:20044576","RESID:AA0514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-threonine","termid":"MOD:00005"},{"relation_name":"is_a","term_name":"mannosylated residue","termid":"MOD:00595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(6-phosphomannosyl)-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-[6-phosphonooxy-alpha-D-mannopyranosyloxy]butanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Man6P) threonine","type":"exact"},{"name":"O-(6-phosphomannosyl)-L-threonine","type":"exact"},{"name":"O3-(6-phosphomannosyl)threonine","type":"exact"}],"termid":"MOD:01617"}


id: GO:0070334
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha6-beta4 integrin complex bound to laminin 5.","definition_xrefs":["GOC:mah","PMID:7556090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha6-beta4 integrin-laminin 5 complex","synonyms":[{"name":"ITGA6-ITGB4-LAMA5 complex","type":"narrow"},{"name":"alpha6-beta4 integrin-laminin-332 complex","type":"exact"}],"termid":"GO:0070334"}


id: PBO:0034453
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glutamate_dehydrogenase_(NADP+)_activity","termid":"PBO:0034453"}


id: GO:0098641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any cadherin binding that occurs as part of the process of cell-cell adhesion.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cadherin binding","termid":"GO:0045296"},{"relation_name":"is_a","term_name":"cell-cell adhesion mediator activity","termid":"GO:0098632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098631"}],"interesting_parent_ids":["GO:0005515","GO:0098631","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cadherin binding involved in cell-cell adhesion","termid":"GO:0098641"}


id: MONDO:1011835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital cerebellar anomaly, non-human animal","secondary_identifiers":["OMIA:000176"],"termid":"MONDO:1011835","xrefs":{"Monarch":{"xref_id":"1011835"}}}


id: PBO:0068243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal pseudogene 5","termid":"PBO:0068243"}


id: MONDO:0958190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bradyopsia","termid":"MONDO:0012033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"prolonged electroretinal response suppression 2","secondary_identifiers":["UMLS:C5830452","DOID:0070364","MEDGEN:1841088","OMIM:620344"],"termid":"MONDO:0958190","xrefs":{"Monarch":{"xref_id":"0958190"}}}


id: PBO:0068794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 31, pseudogene","termid":"PBO:0068794"}


id: GO:0050326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: taxifolin + NAD(P)H + H+ + O2 = 2,3-dihydrogossypetin + NAD(P)+ + H2O.","definition_xrefs":["MetaCyc:TAXIFOLIN-8-MONOOXYGENASE-RXN","EC:1.14.13.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"taxifolin 8-monooxygenase activity","synonyms":[{"name":"taxifolin hydroxylase activity","type":"exact"},{"name":"taxifolin,NAD(P)H:oxygen oxidoreductase (8-hydroxylating)","type":"related"}],"termid":"GO:0050326"}


id: PBO:0113464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the mitochondrial alpha-ketoglutarate dehydrogenase; recruits E3 subunit (Lpd1p) to the E1-E2 (Kgd1p, Kgd2p) core; exists in two forms derived from a single mRNA translated from two alternative start sites; evolutionarily conserved role in the organization of mitochondrial α-KGDH complexes; homolog of human KGD4","termid":"PBO:0113464"}


id: GO:0010393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galacturonan, a pectin polymer containing a backbone of alpha-(1->4)-linked D-galacturonic acid residues.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"galacturonan metabolic process","synonyms":[{"name":"galacturonan metabolism","type":"exact"}],"termid":"GO:0010393"}


id: MONDO:0012827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scoliosis, isolated, susceptibility to, 5","secondary_identifiers":["OMIM:612239","MEDGEN:436862","UMLS:C2677107"],"synonyms":[{"name":"IS5","type":"exact"},{"name":"scoliosis, idiopathic, susceptibility to, 5","type":"exact"},{"name":"scoliosis, isolated, susceptibility to, 5","type":"exact"}],"termid":"MONDO:0012827","xrefs":{"Monarch":{"xref_id":"0012827"}}}


id: MONDO:0019040
data:
  {"annotated_genes":["SJAG_04699","SJAG_01806","SJAG_01548","SJAG_03244","SJAG_01804","SJAG_02231","SJAG_00441","SJAG_02846","SJAG_02795","SJAG_02317","SJAG_02035","SJAG_00112","SJAG_03898","SJAG_00213","SJAG_03436","SJAG_01286","SJAG_03424","SJAG_03286","SJAG_04884","SJAG_01082","SJAG_04324","SJAG_00786","SJAG_03635","SJAG_01465","SJAG_04663"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859575"},{"annotations":[85947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859576"},{"annotations":[87320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008876"},{"annotations":[86489,86490,86488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013256"},{"annotations":[87116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[87113,87112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009759"},{"annotations":[86261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013582"},{"annotations":[85945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859346"},{"annotations":[86054,86055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"},{"annotations":[85887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012574"},{"annotations":[86602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010334"},{"annotations":[86320,86316,86315,86319,86318,86321,86317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"},{"annotations":[85962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014848"},{"annotations":[87462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008644"},{"annotations":[85939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008684"}]},"cv_name":"mondo","definition":"Clinical conditions caused by an abnormal chromosome constitution in which there is extra or missing chromosome material (either a whole chromosome or a chromosome segment). (from Thompson et al., Genetics in Medicine, 5th ed, p429)","definition_xrefs":["MESH:D025063"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00213":null,"SJAG_00441":null,"SJAG_00786":null,"SJAG_01082":null,"SJAG_01286":null,"SJAG_01465":null,"SJAG_01548":null,"SJAG_01804":null,"SJAG_01806":null,"SJAG_02035":null,"SJAG_02231":null,"SJAG_02317":null,"SJAG_02795":null,"SJAG_02846":null,"SJAG_03244":null,"SJAG_03286":null,"SJAG_03424":null,"SJAG_03436":null,"SJAG_03635":null,"SJAG_03898":null,"SJAG_04324":null,"SJAG_04663":null,"SJAG_04699":null,"SJAG_04884":null},"genotype_count":0,"is_obsolete":false,"name":"chromosomal disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:68335","UMLS:C0008626","NANDO:2100279","DOID:0080014","ICD9:758.89","NANDO:1100014","NANDO:2100280","MEDGEN:3441","ICD10CM:Q90-Q99","SCTID:409709004","NCIT:C34470"],"synonyms":[{"name":"autosomal chromosome disorder","type":"related"},{"name":"autosomal chromosome disorders","type":"related"},{"name":"chromosomal disease","type":"exact"},{"name":"chromosomal disorder","type":"exact"},{"name":"chromosomal disorders","type":"exact"},{"name":"chromosome abnormality disorder","type":"related"},{"name":"chromosome abnormality disorders","type":"related"},{"name":"chromosome disorder","type":"exact"},{"name":"chromosome disorder, autosomal","type":"related"},{"name":"chromosome disorders, autosomal","type":"related"},{"name":"disorder, chromosomal","type":"exact"},{"name":"disorder, chromosome","type":"exact"},{"name":"disorder, chromosome abnormality","type":"related"},{"name":"disorders, chromosomal","type":"exact"},{"name":"disorders, chromosome","type":"exact"}],"termid":"MONDO:0019040","terms_by_termid":{"MONDO:0007925":null,"MONDO:0008644":null,"MONDO:0008684":null,"MONDO:0008876":null,"MONDO:0009759":null,"MONDO:0010334":null,"MONDO:0010767":null,"MONDO:0011402":null,"MONDO:0012574":null,"MONDO:0013256":null,"MONDO:0013582":null,"MONDO:0014848":null,"MONDO:0859346":null,"MONDO:0859575":null,"MONDO:0859576":null},"xrefs":{"Monarch":{"xref_id":"0019040"}}}


id: GO:2000282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular amino acid biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"amino acid biosynthetic process","termid":"GO:0008652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150"],"is_obsolete":false,"name":"regulation of amino acid biosynthetic process","synonyms":[{"name":"regulation of cellular amino acid anabolism","type":"exact"},{"name":"regulation of cellular amino acid biosynthesis","type":"exact"},{"name":"regulation of cellular amino acid biosynthetic process","type":"exact"},{"name":"regulation of cellular amino acid formation","type":"exact"},{"name":"regulation of cellular amino acid synthesis","type":"exact"}],"termid":"GO:2000282"}


id: PR:C6Y4A5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6F6.19 gene.","definition_xrefs":["UniProtKB:C6Y4A5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6F6.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.19","synonyms":[{"name":"Spom972h-SPAC6F6.19","type":"exact"}],"termid":"PR:C6Y4A5"}


id: PBO:0072962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretogranin III","termid":"PBO:0072962"}


id: GO:0006788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the loss of electrons from one or more atoms in heme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heme metabolic process","termid":"GO:0042168"},{"relation_name":"part_of","term_name":"porphyrin-containing compound catabolic process","termid":"GO:0006787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"heme oxidation","synonyms":[{"name":"haem oxidation","type":"exact"}],"termid":"GO:0006788"}


id: GO:0032487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Rap protein signal transduction.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"Rap protein signal transduction","termid":"GO:0032486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Rap protein signal transduction","termid":"GO:0032487"}


id: GO:1905794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a puromycin stimulus.","definition_xrefs":["PMID:25736288","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to puromycin","synonyms":[{"name":"response to 3'-deoxy-N,N-dimethyl-3'-(O-methyl-L-tyrosinamido)adenosine","type":"exact"}],"termid":"GO:1905794"}


id: PBO:0041423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C8orf34 antisense RNA 1","termid":"PBO:0041423"}


id: MONDO:0015303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Macular amyloidosis (MA) is a rare chronic form of cutaneous amyloidosis, a skin disease characterized by the accumulation of amyloid deposits in the dermis, clinically characterized by pruritic hyperkeratotic gray-brown macules that give a rippled or reticulated pattern of pigmentation usually in the upper back and extensor sites of arms, forearms and legs, and histologically by the deposition of amyloid in the upper dermis and close to the basal cell layer of the epidermis. MA is commonly associated with other skin diseases, such as atopic dermatitis.","definition_xrefs":["Orphanet:137814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous amyloidosis","termid":"MONDO:0015301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"macular amyloidosis","secondary_identifiers":["ICD10EXP:E85.4+","ICD10EXP:L99.0*","UMLS:C0544839","GARD:19885","icd11.foundation:1192013809","MEDGEN:1372504"],"termid":"MONDO:0015303","xrefs":{"Monarch":{"xref_id":"0015303"}}}


id: MONDO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hepatic veno-occlusive disease (obsolete MONDO:0000887)","termid":"MONDO:0000887","xrefs":{"Monarch":{"xref_id":"0000887"}}}


id: MONDO:0002179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete placental choriocarcinoma (obsolete MONDO:0002179)","termid":"MONDO:0002179","xrefs":{"Monarch":{"xref_id":"0002179"}}}


id: PBO:0089843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane alkaline phosphatase","termid":"PBO:0089843"}


id: PBO:0091775
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SPT8","termid":"PBO:0091775"}


id: FYPO:0005127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA transcribed from late meiotic genes measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth). Late meiotic genes are normally transcribed during spore maturation.","definition_xrefs":["PMID:17927811","PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of meiotic gene mRNA during vegetative growth","termid":"FYPO:0002173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased level of late meiotic gene mRNA during vegetative growth","synonyms":[{"name":"increased level of late meiosis gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of late meiotic gene RNA during vegetative growth","type":"exact"},{"name":"increased level of late meiotic gene mRNA during vegetative growth during mitotic cell cycle","type":"related"},{"name":"increased level of late meiotic gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005127"}


id: PBO:0077175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"talin 2","termid":"PBO:0077175"}


id: MONDO:0005068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gross necrosis of the myocardium, as a result of interruption of the blood supply to the area, as in coronary thrombosis.","definition_xrefs":["NCIT:C27996"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"coronary artery disorder","termid":"MONDO:0005010"},{"relation_name":"is_a","term_name":"myocardial disorder","termid":"MONDO:0024643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"myocardial infarction","secondary_identifiers":["MESH:D009203","NANDO:2200248","HP:0001658","EFO:0000612","ICD10CM:I21","SCTID:22298006","UMLS:C0027051","MEDGEN:10150","DOID:5844"],"synonyms":[{"name":"MI","type":"exact"},{"name":"MI, myocardial infarction","type":"exact"},{"name":"heart attack","type":"exact"},{"name":"infarction (MI), myocardial","type":"exact"},{"name":"myocardial infarct","type":"exact"},{"name":"myocardial infarction","type":"exact"},{"name":"myocardial infarction (disease)","type":"exact"},{"name":"myocardial infarction, (MI)","type":"exact"}],"termid":"MONDO:0005068","xrefs":{"Monarch":{"xref_id":"0005068"}}}


id: PBO:0113032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; enzyme preparation shows antitumor activity; reference strain S288C has four copies of ASP3; ASP3-2 has a paralog, ASP3-4, that arose from a segmental duplication","termid":"PBO:0113032"}


id: GO:0099188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising cytoskeletal filaments and their associated proteins in the postsynaptic cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"},{"relation_name":"part_of","term_name":"postsynapse organization","termid":"GO:0099173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"postsynaptic cytoskeleton organization","termid":"GO:0099188"}


id: PBO:0057474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 592","termid":"PBO:0057474"}


id: GO:1901927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cadinene.","definition_xrefs":["PMID:22867794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"cadinene metabolic process","termid":"GO:1901926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"cadinene catabolic process","synonyms":[{"name":"cadinene breakdown","type":"exact"},{"name":"cadinene catabolism","type":"exact"},{"name":"cadinene degradation","type":"exact"}],"termid":"GO:1901927"}


id: PBO:0034227
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-serially_homologous_to","termid":"PBO:0034227"}


id: PBO:0004834
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypermethioninemia","termid":"PBO:0004834"}


id: MONDO:0700193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monocytic leukemia that occurs in a chicken.","definition_xrefs":["NCIT:C134945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia, non-human animal","termid":"MONDO:0700100"},{"relation_name":"is_a","term_name":"chicken neoplasm","termid":"MONDO:0700189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chicken monocytic leukemia","termid":"MONDO:0700193","xrefs":{"Monarch":{"xref_id":"0700193"}}}


id: GO:0019451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown into pyruvate of L-cystine, catalyzed by the enzyme cysteine dioxygenase (EC:1.13.11.20).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process to pyruvate","termid":"GO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-cysteine catabolic process to pyruvate, using cysteine dioxygenase","secondary_identifiers":["MetaCyc:CYSTEINE-DEG-PWY"],"synonyms":[{"name":"L-cysteine breakdown to pyruvate, using cysteine dioxygenase","type":"exact"},{"name":"L-cysteine degradation to pyruvate, using cysteine dioxygenase","type":"exact"}],"termid":"GO:0019451"}


id: PBO:0046366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 3","termid":"PBO:0046366"}


id: GO:0018575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,6-dichlorocatechol + O2 = 2 H+ + 2,5-dichloro-cis,cis-muconate.","definition_xrefs":["UM-BBD_reactionID:r0655"],"gene_count":0,"genotype_count":0,"name":"obsolete chlorocatechol 1,2-dioxygenase activity (obsolete GO:0018575)","termid":"GO:0018575"}


id: MONDO:0020046
data:
  {"annotated_genes":["SJAG_01286","SJAG_03862"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[85878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100340"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01286":null,"SJAG_03862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive degenerative and progressive cerebellar ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5681515","Orphanet:98098","GARD:19415","MEDGEN:1842627"],"termid":"MONDO:0020046","terms_by_termid":{"MONDO:0011402":null,"MONDO:0100340":null},"xrefs":{"Monarch":{"xref_id":"0020046"}}}


id: PBO:0056093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYN proto-oncogene, Src family tyrosine kinase","termid":"PBO:0056093"}


id: FYPO:0006285
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the duration of localization of a protein to the telomere of a chromosome is longer than normal during anaphase B of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of protein localization to telomere","termid":"FYPO:0005649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased duration of protein localization to telomere during mitotic anaphase B","synonyms":[{"name":"increased duration of protein localisation to telomere during mitotic anaphase B","type":"exact"},{"name":"increased duration of protein localization to chromosome, telomeric region during mitotic anaphase B","type":"exact"},{"name":"increased duration of protein localization to telomere during anaphase B during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to telomere during anaphase B of mitotic cell cycle","type":"exact"},{"name":"increased duration of protein localization to telomeric region during mitotic anaphase B","type":"exact"},{"name":"prolonged protein localization to telomere during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0006285"}


id: PBO:0002273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Dlc2 (predicted)","termid":"PBO:0002273"}


id: MONDO:0014339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive cerebellar ataxia in which the cause of the disease is a mutation in the STUB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive spinocerebellar ataxia 16","secondary_identifiers":["GARD:17689","Orphanet:412057","UMLS:C5190574","OMIM:615768","MEDGEN:1674542","DOID:0080029"],"synonyms":[{"name":"SCAR16","type":"exact"},{"name":"STUB1 autosomal recessive cerebellar ataxia","type":"exact"},{"name":"autosomal recessive cerebellar ataxia caused by mutation in STUB1","type":"exact"},{"name":"autosomal recessive cerebellar ataxia due to STUB1 deficiency","type":"related"},{"name":"autosomal recessive spinocerebellar ataxia 16","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia type 16","type":"exact"},{"name":"spinocerebellar ataxia autosomal recessive type 16","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 16","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive type 16","type":"exact"}],"termid":"MONDO:0014339","xrefs":{"Monarch":{"xref_id":"0014339"}}}


id: PBO:0081541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 454","termid":"PBO:0081541"}


id: FYPO:0002553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break processing is abnormal. Double-strand break processing is the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang.","definition_xrefs":["GO:0000729","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001320","FYPO:0000002","FYPO:0000298","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal double-strand break processing","synonyms":[{"name":"abnormal DSB processing","type":"exact"},{"name":"abnormal double-strand break processing during mitotic cell cycle","type":"related"},{"name":"abnormal double-strand break processing during vegetative growth","type":"exact"}],"termid":"FYPO:0002553"}


id: PR:000027587
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1, initiator methionine removed unphosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136.","definition_xrefs":["PMID:11242054","PMID:20929775","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1, initiator methionine removed unphosphorylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"Spom-hht1/InitMet-/PhosRes-","type":"exact"}],"termid":"PR:000027587"}


id: FYPO:0000425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of endocytosis is increased. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased endocytosis during vegetative growth","synonyms":[{"name":"endocytosis: increased during vegetative growth","type":"related"},{"name":"increased actin-mediated endocytosis during vegetative growth","type":"exact"},{"name":"increased endocytosis during mitotic cell cycle","type":"related"},{"name":"increased protein internalization during vegetative growth","type":"narrow"}],"termid":"FYPO:0000425"}


id: PBO:0077580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMLHE antisense RNA 1","termid":"PBO:0077580"}


id: PBO:0001463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine carbamoyltransferase Arg3","termid":"PBO:0001463"}


id: GO:0002827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a T-helper 1 type immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 type immune response","termid":"GO:0002825"},{"relation_name":"positively_regulates","term_name":"T-helper 1 type immune response","termid":"GO:0042088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper 1 type immune response","synonyms":[{"name":"activation of T-helper 1 type immune response","type":"narrow"},{"name":"stimulation of T-helper 1 type immune response","type":"narrow"},{"name":"up regulation of T-helper 1 type immune response","type":"exact"},{"name":"up-regulation of T-helper 1 type immune response","type":"exact"},{"name":"upregulation of T-helper 1 type immune response","type":"exact"}],"termid":"GO:0002827"}


id: GO:0089703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-aspartate out of the vacuole, across the vacuolar membrane.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"vacuolar amino acid transmembrane transport","termid":"GO:0034487"},{"relation_name":"is_a","term_name":"L-aspartate transmembrane transport","termid":"GO:0070778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"L-aspartate transmembrane export from vacuole","termid":"GO:0089703"}


id: PBO:0053330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 161","termid":"PBO:0053330"}


id: PBO:0001294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cytochrome c-heme linkage protein Cyc2 (predicted)","termid":"PBO:0001294"}


id: GO:0009728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a gibberellic acid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to gibberellin","termid":"GO:0009739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of gibberellic acid stimulus","synonyms":[{"name":"perception of gibberellic acid stimulus","type":"related"}],"termid":"GO:0009728"}


id: PBO:0079766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFL1 antisense RNA 1","termid":"PBO:0079766"}


id: GO:0060764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another and contributes to the progression of the mammary gland, from its initial state to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell-cell signaling involved in mammary gland development","synonyms":[{"name":"cell-cell signalling involved in mammary gland development","type":"exact"}],"termid":"GO:0060764"}


id: PBO:0069600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 877, pseudogene","termid":"PBO:0069600"}


id: PBO:0065421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMB7 pseudogene 1","termid":"PBO:0065421"}


id: PBO:0041178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 2 member A3, pseudogene","termid":"PBO:0041178"}


id: MONDO:0002269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disorder that affects the upper and lower gastrointestinal tract. Most commonly, this is attributed to viruses; however bacteria, parasites or adverse reactions can also be the culprit. Symptoms include acute diarrhea and vomiting.","definition_xrefs":["NCIT:C34632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastroenteritis","secondary_identifiers":["SCTID:25374005","DOID:2326","UMLS:C0017160","EFO:1001463","ICD9:558.9","MEDGEN:8967","MESH:D005759"],"synonyms":[{"name":"cholera morbus","type":"exact"},{"name":"infectious colitis, enteritis and gastroenteritis","type":"narrow"},{"name":"inflammation of intestine","type":"exact"},{"name":"intestine inflammation","type":"exact"}],"termid":"MONDO:0002269","xrefs":{"Monarch":{"xref_id":"0002269"}}}


id: PBO:0049839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 3","termid":"PBO:0049839"}


id: PBO:0065898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB41, member RAS oncogene family","termid":"PBO:0065898"}


id: MONDO:0004803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"collagenopathy","termid":"MONDO:0004603"},{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267","MONDO:0005570"],"is_obsolete":false,"name":"disseminated eosinophilic collagen disease","secondary_identifiers":["MEDGEN:538043","SCTID:423486005","UMLS:C0263662","DOID:9499","ICD9:710.8"],"termid":"MONDO:0004803","xrefs":{"Monarch":{"xref_id":"0004803"}}}


id: MOD:01613
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3',5'-diiodo-L-tyrosine.","definition_xrefs":["RESID:AA0510","ChEBI:15768","PubMed:8995307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diiodinated tyrosine","termid":"MOD:01140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3',5'-diiodo-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-(4-hydroxy-3,5-diiodophenyl)propanoic acid","type":"exact"},{"name":"3',5'-diiodo-L-tyrosine","type":"exact"},{"name":"3,5-diiodo-L-tyrosine","type":"exact"},{"name":"3,5-diiodotyrosine","type":"exact"},{"name":"DIT","type":"exact"},{"name":"MOD_RES Diiodotyrosine","type":"exact"},{"name":"iodogorgoic acid","type":"exact"}],"termid":"MOD:01613"}


id: MONDO:0010724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete RP6 (obsolete MONDO:0010724)","termid":"MONDO:0010724","xrefs":{"Monarch":{"xref_id":"0010724"}}}


id: PBO:0060777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B8 pseudogene 3","termid":"PBO:0060777"}


id: PBO:0046661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"espin like","termid":"PBO:0046661"}


id: GO:0042960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of antimonite from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimonite transmembrane transporter activity","termid":"GO:0015104"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"antimonite secondary active transmembrane transporter activity","synonyms":[{"name":"antimonite porter activity","type":"related"}],"termid":"GO:0042960"}


id: MONDO:0007490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carpotarsal osteochondromatosis is a very rare primary bone dysplasia disorder characterized by abnormal bone proliferation and osteochondromas in the upper and lower limbs.","definition_xrefs":["Orphanet:2767"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carpotarsal osteochondromatosis","secondary_identifiers":["icd11.foundation:1406756925","MESH:C565076","MEDGEN:377557","OMIM:127820","UMLS:C1851956","GARD:1128","SCTID:389272007"],"synonyms":[{"name":"Maroteaux Le Merrer Bensahel syndrome","type":"related"},{"name":"Maroteaux-Le Merrer-Bensahel syndrome","type":"exact"},{"name":"dominant carpotarsal osteochondromatosis","type":"related"},{"name":"dysplasia epiphysealis hemimelica with CHONDROMAS and osteochondromas","type":"related"},{"name":"osteochondromatosis, dominant carpotarsal","type":"related"}],"termid":"MONDO:0007490","xrefs":{"Monarch":{"xref_id":"0007490"}}}


id: PBO:0074365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-pass membrane protein with coiled-coil domains 3","termid":"PBO:0074365"}


id: PBO:0117186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP6 antisense RNA 1","termid":"PBO:0117186"}


id: PBO:0003390
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.21","termid":"PBO:0003390"}


id: PBO:0083556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene HUL4/YJR036C; deletion mutant has decreased spore survival in Drosophila feces","termid":"PBO:0083556"}


id: PBO:0002481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup146","termid":"PBO:0002481"}


id: MONDO:0016135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hereditary neurologic disease with peripheral neuropathy (obsolete MONDO:0016135)","secondary_identifiers":["Orphanet:207025"],"termid":"MONDO:0016135","xrefs":{"Monarch":{"xref_id":"0016135"}}}


id: FYPO:0004279
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of hypoxanthine DNA N-glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA N-glycosylase activity","termid":"FYPO:0008216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal hypoxanthine DNA N-glycosylase activity","termid":"FYPO:0004279"}


id: MONDO:0011048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy-microcephaly-skeletal dysplasia syndrome is characterized by the association of moderate to severe intellectual deficit, microcephaly, epilepsy, coarse face, hirsutism and skeletal abnormalities (scoliosis and retarded bone development). It has been described only once, in two sibs (one male and one female). This syndrome is likely to be an autosomal recessive condition and thus parents should be informed of a 25% risk of recurrence for other children.","definition_xrefs":["Orphanet:1948"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy-microcephaly-skeletal dysplasia syndrome","secondary_identifiers":["MEDGEN:330468","OMIM:601352","UMLS:C1832437","GARD:836"],"synonyms":[{"name":"Battaglia-Neri syndrome","type":"exact"},{"name":"epilepsy - microcephaly - skeletal dysplasia","type":"related"},{"name":"intellectual disability, microcephaly, epilepsy, and coarse face","type":"related"},{"name":"mental retardation, microcephaly, epilepsy, and coarse face","type":"related"}],"termid":"MONDO:0011048","xrefs":{"Monarch":{"xref_id":"0011048"}}}


id: MONDO:0016002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Ehlers-Danlos syndrome characterized by severe hypotonia and kyphoscoliosis at birth, generalized joint hyperextensibility and ocular globe fragility.","definition_xrefs":["Orphanet:1900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, kyphoscoliotic type 1","secondary_identifiers":["NANDO:1200649","UMLS:C0268342","MESH:C536198","MEDGEN:75672","SCTID:718211004","GARD:22216","DOID:0080734","NCIT:C125700","NANDO:2201259","OMIM:225400"],"synonyms":[{"name":"EDS 6","type":"exact"},{"name":"EDS 6 (formerly)","type":"related"},{"name":"EDS VI","type":"related"},{"name":"EDS VIA","type":"narrow"},{"name":"EDS, kyphoscoliotic type","type":"exact"},{"name":"EDS, oculoscoliotic type","type":"exact"},{"name":"EDS6","type":"exact"},{"name":"EDS6A, formerly","type":"related"},{"name":"EDSKSCL1","type":"related"},{"name":"Ehlers-Danlos syndrome kyphoscoliotic type","type":"exact"},{"name":"Ehlers-Danlos syndrome oculoscoliotic type","type":"related"},{"name":"Ehlers-Danlos syndrome type 6 (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome type 6A","type":"narrow"},{"name":"Ehlers-Danlos syndrome type 6A (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome, kyphoscoliosis type","type":"related"},{"name":"Ehlers-Danlos syndrome, kyphoscoliotic type","type":"exact"},{"name":"Ehlers-Danlos syndrome, kyphoscoliotic type 1","type":"exact"},{"name":"Ehlers-Danlos syndrome, kyphoscoliotic type, 1","type":"related"},{"name":"Ehlers-Danlos syndrome, ocular-scoliotic type","type":"related"},{"name":"Ehlers-Danlos syndrome, oculoscoliotic type","type":"exact"},{"name":"Ehlers-Danlos syndrome, type 6","type":"exact"},{"name":"Ehlers-Danlos syndrome, type 6 A","type":"related"},{"name":"Ehlers-Danlos syndrome, type VI","type":"related"},{"name":"Ehlers-Danlos syndrome, type VIA","type":"narrow"},{"name":"Ehlers-Danlos syndrome, type VIA, formerly","type":"narrow"},{"name":"Ehlers-Danlos syndrome, type Via","type":"narrow"},{"name":"Ehlers-Danlos syndrome, type Via, formerly","type":"narrow"},{"name":"kEDS","type":"related"},{"name":"kyphoscoliotic EDS","type":"related"},{"name":"kyphoscoliotic Ehlers-Danlos syndrome","type":"related"},{"name":"kyphoscoliotic Ehlers-Danlos syndrome due to lysyl hydroxylase 1 deficiency","type":"exact"},{"name":"nevo syndrome","type":"exact"}],"termid":"MONDO:0016002","xrefs":{"Monarch":{"xref_id":"0016002"}}}


id: PBO:0047217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 224 member A","termid":"PBO:0047217"}


id: FYPO:0004417
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to phosphate starvation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during cellular response to phosphate starvation","synonyms":[{"name":"normal RNA accumulation during cellular response to phosphate starvation","type":"related"},{"name":"normal RNA level during cellular response to phosphate starvation during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to phosphate starvation during vegetative growth","type":"exact"},{"name":"normal RNA level during phosphate starvation","type":"exact"},{"name":"normal mRNA level during cellular response to phosphate starvation","type":"narrow"},{"name":"normal transcript level during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0004417"}


id: PBO:0116681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 13A","termid":"PBO:0116681"}


id: MONDO:0800400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited retinopathy caused by bi-allelic variants in the RP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005328"],"is_obsolete":false,"name":"RP1-related dominant retinopathy","termid":"MONDO:0800400","xrefs":{"Monarch":{"xref_id":"0800400"}}}


id: FYPO:0006447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cleavage furrow does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell division site","termid":"FYPO:0001880"},{"relation_name":"is_a","term_name":"abolished protein localization to cell periphery during vegetative growth","termid":"FYPO:0005571"},{"relation_name":"is_a","term_name":"abolished protein localization to membrane during vegetative growth","termid":"FYPO:0005757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to cleavage furrow during vegetative growth","synonyms":[{"name":"abolished protein localization to cleavage furrow during mitotic cell cycle","type":"related"},{"name":"protein absent from cleavage furrow during vegetative growth","type":"related"},{"name":"protein localization to cleavage furrow abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006447"}


id: MONDO:0011919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autoimmune disease in which the cause of the disease is a mutation in the FOXD3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune disease, susceptibility to, 1","secondary_identifiers":["OMIM:607836","UMLS:C1842979","MEDGEN:335848"],"synonyms":[{"name":"AIS1","type":"related"},{"name":"FOXD3 autoimmune disease","type":"exact"},{"name":"autoimmune disease caused by mutation in FOXD3","type":"exact"},{"name":"autoimmune disease susceptibility locus, chromosome 1P-related","type":"related"},{"name":"autoimmune disease, susceptibility to, 1","type":"exact"},{"name":"autoimmune disease, susceptibility to, type 1","type":"exact"},{"name":"susceptibility to autoimmune disease 1","type":"related"},{"name":"vitiligo-associated multiple autoimmune disease susceptibility 2","type":"related"}],"termid":"MONDO:0011919","xrefs":{"Monarch":{"xref_id":"0011919"}}}


id: PBO:0064150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 2 pseudogene 1","termid":"PBO:0064150"}


id: PBO:0027944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_homologous_chromosome_segregation","termid":"PBO:0027944"}


id: FYPO:0003539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) over the entire length of the chromosomes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing","termid":"FYPO:0003024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"decreased global homologous chromosome pairing","synonyms":[{"name":"decreased generalised homologous chromosome pairing","type":"exact"},{"name":"decreased global homologous chromosome pairing at meiosis","type":"exact"},{"name":"decreased global synapsis","type":"exact"},{"name":"globally decreased homologous chromosome pairing","type":"exact"},{"name":"reduced global homologous chromosome pairing","type":"exact"}],"termid":"FYPO:0003539"}


id: GO:2000046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of G2 phase of mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of G2 phase of mitotic cell cycle (obsolete GO:2000046)","synonyms":[{"name":"regulation of G2 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:2000046"}


id: PBO:0028045
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_polymerization","termid":"PBO:0028045"}


id: PBO:0043270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 1 member A","termid":"PBO:0043270"}


id: PBO:0085342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoinositide PI4,5P(2) binding protein, forms a complex with Slm2p; acts downstream of Mss4p in a pathway regulating actin cytoskeleton organization in response to stress; TORC2 complex substrate and effector; protein abundance increases in response to DNA replication stress; SLM1 has a paralog, SLM2, that arose from the whole genome duplication","termid":"PBO:0085342"}


id: GO:0019532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oxalate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"oxalate transport","synonyms":[{"name":"ethanedioate transport","type":"exact"},{"name":"ethanedioic acid transport","type":"exact"},{"name":"oxalic acid transport","type":"exact"}],"termid":"GO:0019532"}


id: PBO:0111860
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin homology (CH) domain","termid":"PBO:0111860"}


id: MONDO:0006512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of breast cancer that is estrogen-receptor positive","definition_xrefs":["EFO:1000649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"estrogen-receptor positive breast cancer","secondary_identifiers":["MEDGEN:1843470","UMLS:C2938924","DOID:0060075"],"synonyms":[{"name":"ER+ breast cancer","type":"exact"},{"name":"estrogen receptor positive breast cancer","type":"exact"},{"name":"oestrogen receptor positive breast cancer","type":"exact"}],"termid":"MONDO:0006512","xrefs":{"Monarch":{"xref_id":"0006512"}}}


id: MONDO:0001045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital malformation characterized by the absence of a normal opening in a part of the intestine. It can occur either in the small or the large intestine.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal atresia","secondary_identifiers":["UMLS:C0021828","DOID:10486","HP:0011100","MESH:D007409","NCIT:C84790","MEDGEN:7129"],"synonyms":[{"name":"atresia of the intestine","type":"exact"},{"name":"congenital intestinal atresia","type":"exact"},{"name":"intestinal atresia","type":"exact"},{"name":"intestinal atresia (disease)","type":"exact"}],"termid":"MONDO:0001045","xrefs":{"Monarch":{"xref_id":"0001045"}}}


id: PBO:0042240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 3","termid":"PBO:0042240"}


id: PBO:0077782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase I mitochondrial","termid":"PBO:0077782"}


id: MONDO:0016380
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired hypertrichosis lanuginosa is a rare cutaneous paraneoplastic disease characterized by the presence of excessive lanugo-type hair on the glabrous skin of face, neck, trunk and limbs that can be associated with additional clinical features such as burning glossitis, papillary hypertrophy of the tongue, diarrhea, dysgeusia, and/or weight loss. It is associated with lymphoma or cancer of the gastrointestinal system, urinary tract, lung, breast, uterus or ovary.","definition_xrefs":["Orphanet:2221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired hypertrichosis lanuginosa","secondary_identifiers":["icd11.foundation:1885858920","UMLS:C0343072","GARD:2864","ICD10CM:L68.1","MEDGEN:87468","SCTID:25967007"],"synonyms":[{"name":"hypertrichosis lanuginosa, acquired","type":"related"}],"termid":"MONDO:0016380","xrefs":{"Monarch":{"xref_id":"0016380"}}}


id: PBO:0034615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-globally_decreased_meiotic_recombination","termid":"PBO:0034615"}


id: GO:1904077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of estrogen biosynthetic process.","definition_xrefs":["GO_REF:0000058","PMID:24530842","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of hormone biosynthetic process","termid":"GO:0032353"},{"relation_name":"is_a","term_name":"regulation of estrogen biosynthetic process","termid":"GO:1904076"},{"relation_name":"negatively_regulates","term_name":"estrogen biosynthetic process","termid":"GO:0006703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of estrogen biosynthetic process","synonyms":[{"name":"negative regulation of estrogen synthesis","type":"exact"},{"name":"negative regulation of oestrogen biosynthesis","type":"exact"},{"name":"negative regulation of oestrogen biosynthetic process","type":"exact"},{"name":"down regulation of estrogen anabolism","type":"exact"},{"name":"down regulation of estrogen biosynthesis","type":"exact"},{"name":"down regulation of estrogen biosynthetic process","type":"exact"},{"name":"down regulation of estrogen formation","type":"exact"},{"name":"down regulation of estrogen synthesis","type":"exact"},{"name":"down regulation of oestrogen biosynthesis","type":"exact"},{"name":"down regulation of oestrogen biosynthetic process","type":"exact"},{"name":"down-regulation of estrogen anabolism","type":"exact"},{"name":"down-regulation of estrogen biosynthesis","type":"exact"},{"name":"down-regulation of estrogen biosynthetic process","type":"exact"},{"name":"down-regulation of estrogen formation","type":"exact"},{"name":"down-regulation of estrogen synthesis","type":"exact"},{"name":"down-regulation of oestrogen biosynthesis","type":"exact"},{"name":"down-regulation of oestrogen biosynthetic process","type":"exact"},{"name":"downregulation of estrogen anabolism","type":"exact"},{"name":"downregulation of estrogen biosynthesis","type":"exact"},{"name":"downregulation of estrogen biosynthetic process","type":"exact"},{"name":"downregulation of estrogen formation","type":"exact"},{"name":"downregulation of estrogen synthesis","type":"exact"},{"name":"downregulation of oestrogen biosynthesis","type":"exact"},{"name":"downregulation of oestrogen biosynthetic process","type":"exact"},{"name":"inhibition of estrogen anabolism","type":"narrow"},{"name":"inhibition of estrogen biosynthesis","type":"narrow"},{"name":"inhibition of estrogen biosynthetic process","type":"narrow"},{"name":"inhibition of estrogen formation","type":"narrow"},{"name":"inhibition of estrogen synthesis","type":"narrow"},{"name":"inhibition of oestrogen biosynthesis","type":"narrow"},{"name":"inhibition of oestrogen biosynthetic process","type":"narrow"},{"name":"negative regulation of estrogen anabolism","type":"exact"},{"name":"negative regulation of estrogen biosynthesis","type":"exact"},{"name":"negative regulation of estrogen formation","type":"exact"}],"termid":"GO:1904077"}


id: GO:0106381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which produces a purine deoxyribonucleotide from derivatives of it, without de novo synthesis.","definition_xrefs":["PMID:6605343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine nucleotide salvage","termid":"GO:0032261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"purine deoxyribonucleotide salvage","termid":"GO:0106381"}


id: PBO:0065657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRG antisense RNA 1","termid":"PBO:0065657"}


id: FYPO:0000790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch organization is abnormal. The process normally results in the assembly, arrangement of constituent parts, or disassembly of an actin cortical patch.","definition_xrefs":["PomBase:mah","GO:0044396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0004803"],"is_obsolete":false,"name":"abnormal actin cortical patch organization","synonyms":[{"name":"abnormal F-actin patch organization","type":"exact"},{"name":"abnormal actin cortical patch organisation","type":"exact"},{"name":"abnormal actin cortical patch organization during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch organization during vegetative growth","type":"exact"},{"name":"abnormal actin patch organization","type":"exact"}],"termid":"FYPO:0000790"}


id: GO:0035223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the patterns of cell differentiation in the leg imaginal disc.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"part_of","term_name":"leg disc development","termid":"GO:0035218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leg disc pattern formation","termid":"GO:0035223"}


id: GO:0102333
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: malonyl-CoA + 3 H+ + a stearoyl-[acp] = nonadec-1-ene + 2 carbon dioxide + coenzyme A + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete stearoyl-[acp] elongase/decarboxylase activity (obsolete GO:0102333)","termid":"GO:0102333"}


id: GO:0061177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal inflated portion of the axon of a glutamatergic neuron, containing the specialized apparatus necessary for the phasic release neurotransmitters that will induce the contraction of muscle. Type Is terminal boutons are smaller than type Ib terminal boutons.","definition_xrefs":["GOC:mc","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I terminal bouton","termid":"GO:0061174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type Is terminal bouton","synonyms":[{"name":"type Is terminal button","type":"related"}],"termid":"GO:0061177"}


id: PBO:0013077
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisB","termid":"PBO:0013077"}


id: PBO:0004045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export receptor, Tap, nucleoporin Mex67","termid":"PBO:0004045"}


id: PBO:0051755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction protein for cytohesin exchange factors 1","termid":"PBO:0051755"}


id: FYPO:0005083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at non-coding RNA (ncRNA) genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:21151114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to chromatin at ncRNA gene","synonyms":[{"name":"normal protein localisation to chromatin at ncRNA gene","type":"exact"},{"name":"normal protein localization to chromatin at ncRNA gene during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at ncRNA gene during vegetative growth","type":"exact"}],"termid":"FYPO:0005083"}


id: FYPO:0004880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more lipid metabolism RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Lipid metabolism RNAs are transcribed from genes whose products are involved in any lipid metabolic process.","definition_xrefs":["PMID:26366556","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of lipid metabolism gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of lipid metabolism gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of lipid metabolism gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of lipid metabolism gene transcripts during vegetative growth","type":"exact"},{"name":"decreased lipid metabolism gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of lipid metabolism gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004880"}


id: FYPO:0003124
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translation in the cytoplasm is abnormal. Translation is the synthesis of a protein using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain.","definition_xrefs":["GO:0002183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cytoplasmic translation","synonyms":[{"name":"abnormal cytoplasmic protein biosynthesis","type":"exact"},{"name":"abnormal cytoplasmic protein synthesis","type":"exact"},{"name":"abnormal cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"abnormal cytoplasmic translation during vegetative growth","type":"exact"}],"termid":"FYPO:0003124"}


id: PBO:0076355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 2","termid":"PBO:0076355"}


id: MONDO:0018736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A generalized lymphatic anomaly characterized by kaposiform spindled lymphatic endothelial cells.","definition_xrefs":["PMID:24252784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kaposiform lymphangiomatosis","secondary_identifiers":["GARD:13451","icd11.foundation:1139222402","MEDGEN:1807991","Orphanet:464329","UMLS:C5681097"],"synonyms":[{"name":"KLA","type":"broad"}],"termid":"MONDO:0018736","xrefs":{"Monarch":{"xref_id":"0018736"}}}


id: MONDO:0010763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"},{"relation_name":"is_a","term_name":"partial chromosome Y deletion","termid":"MONDO:0015607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, Y-linked, 1","secondary_identifiers":["GARD:18503","MEDGEN:1634798","UMLS:C4551960","DOID:0070186","OMIM:400042"],"synonyms":[{"name":"SPGFY1","type":"related"},{"name":"Sertoli cell-only syndrome, Y-linked","type":"related"},{"name":"Sertoli cell-only syndrome, type 1","type":"related"},{"name":"Sertoli cell-only syndrome, type 2","type":"related"},{"name":"hypospermatogenesis","type":"related"},{"name":"incomplete Sertoli cell-only syndrome","type":"related"},{"name":"spermatogenic failure, Y-linked, 1","type":"exact"},{"name":"spermatogenic failure, Y-linked, 1, Y-linked","type":"exact"},{"name":"spermatogenic failure, Y-linked, type 1","type":"exact"}],"termid":"MONDO:0010763","xrefs":{"Monarch":{"xref_id":"0010763"}}}


id: PBO:0054922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2336","termid":"PBO:0054922"}


id: PBO:0004936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nop16 (predicted)","termid":"PBO:0004936"}


id: GO:0021597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the central nervous system structure. The central nervous system is the core nervous system that serves an integrating and coordinating function. In vertebrates it consists of the brain, spinal cord and spinal nerves. In those invertebrates with a central nervous system it typically consists of a brain, cerebral ganglia and a nerve cord.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"central nervous system morphogenesis","termid":"GO:0021551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system structural organization","synonyms":[{"name":"central nervous system structural organisation","type":"exact"}],"termid":"GO:0021597"}


id: GO:0010744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of macrophage derived foam cell differentiation. Macrophage derived foam cell differentiation is the process in which a macrophage acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:add","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage derived foam cell differentiation","termid":"GO:0010743"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"positively_regulates","term_name":"macrophage derived foam cell differentiation","termid":"GO:0010742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage derived foam cell differentiation","termid":"GO:0010744"}


id: GO:0070508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol into a cell or organelle.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"cholesterol import","synonyms":[{"name":"cholesterol uptake","type":"exact"}],"termid":"GO:0070508"}


id: GO:0016843
data:
  {"annotated_genes":["SJAG_00283"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036381"}]},"cv_name":"molecular_function","definition":"Catalysis of the release of amines by the cleavage of a carbon-nitrogen bond or the reverse reaction with an amine as a substrate.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen lyase activity","termid":"GO:0016840"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"amine-lyase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:4.3.3.-"],"termid":"GO:0016843","terms_by_termid":{"GO:0036381":null}}


id: PBO:0072255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 30","termid":"PBO:0072255"}


id: PBO:0088394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit Rpr2","termid":"PBO:0088394"}


id: GO:0030184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitric oxide, nitrogen monoxide, from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic molecular entity transmembrane transporter activity","termid":"GO:0015318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"nitric oxide transmembrane transporter activity","termid":"GO:0030184"}


id: RO:0002373
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"m has_muscle_insertion s iff m is attaches_to s, and it is the case that when m contracts, s moves. Insertions are usually connections of muscle via tendon to bone.","direct_ancestors":[{"relation_name":"is_a","term_name":"attached_to","termid":"RO:0002371"},{"relation_name":"is_a","term_name":"biomechanically_related_to","termid":"RO:0002567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_muscle_insertion","termid":"RO:0002373"}


id: PBO:0055279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2706","termid":"PBO:0055279"}


id: PBO:0033745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_circular_minichromosome_loss_during_vegetative_growth","termid":"PBO:0033745"}


id: PBO:0047165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 193 member A","termid":"PBO:0047165"}


id: GO:0007616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The memory process that deals with the storage, retrieval and modification of information a long time (typically weeks, months or years) after receiving that information. This type of memory is typically dependent on gene transcription regulated by second messenger activation.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"memory","termid":"GO:0007613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"long-term memory","secondary_identifiers":["Wikipedia:Long-term_memory"],"termid":"GO:0007616"}


id: GO:1901554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a paracetamol stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to paracetamol","synonyms":[{"name":"response to acetaminophen","type":"exact"}],"termid":"GO:1901554"}


id: PR:Q9UTC4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- reg1 gene.","definition_xrefs":["UniProtKB:Q9UTC4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C227.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.15","synonyms":[{"name":"Spom972h-reg1","type":"exact"}],"termid":"PR:Q9UTC4"}


id: PBO:0076009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1","termid":"PBO:0076009"}


id: GO:0120282
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume that is enclosed within the autolysosome single-membrane.","definition_xrefs":["PMID:32047650","PMID:24657946","PMID:26382870","GOC:nhn","GOC:krc","PMID:17182262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"part_of","term_name":"autolysosome","termid":"GO:0044754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"autolysosome lumen","termid":"GO:0120282"}


id: GO:1904955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any Wnt signaling pathway, planar cell polarity pathway that is involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GOC:PARL","GOC:bf","GOC:TermGenie","PMID:22988876","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in midbrain dopaminergic neuron differentiation (obsolete GO:1904955)","synonyms":[{"name":"PCP pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"PCP pathway involved in mDA neuron differentiation","type":"exact"},{"name":"PCP pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"PCP pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"PCP pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt-JNK signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"Wnt-JNK signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"Wnt-JNK signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"Wnt-JNK signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"Wnt-JNK signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"Wnt-PCP signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"Wnt-PCP signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"Wnt-PCP signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"Wnt-PCP signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"Wnt-PCP signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"non-canonical Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"broad"},{"name":"non-canonical Wnt signaling pathway involved in mDA neuron differentiation","type":"broad"},{"name":"non-canonical Wnt signaling pathway involved in midbrain DA neurogenesis","type":"broad"},{"name":"non-canonical Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"broad"},{"name":"non-canonical Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"broad"},{"name":"non-canonical Wnt-mediated midbrain DA neuron differentiation","type":"broad"},{"name":"planar cell polarity pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"planar cell polarity pathway involved in mDA neuron differentiation","type":"exact"},{"name":"planar cell polarity pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"planar cell polarity pathway involved in midbrain dopaminergic neuron production","type":"exact"}],"termid":"GO:1904955"}


id: PBO:0068369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 152","termid":"PBO:0068369"}


id: FYPO:0004338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing ethanol as the carbon source.","definition_xrefs":["PomBase:mah","PMID:22139357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002060","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"abolished cell population growth on ethanol carbon source","synonyms":[{"name":"abolished ethanol utilization","type":"related"},{"name":"abolished growth on ethanol carbon source","type":"broad"},{"name":"abolished vegetative cell population growth on ethanol carbon source","type":"exact"},{"name":"cell population growth on ethanol carbon source abolished","type":"exact"}],"termid":"FYPO:0004338"}


id: MONDO:0009099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by nephrogenic diabetes insipidus, intracerebral calcifications, intellectual deficit, short stature and facial dysmorphism.","definition_xrefs":["Orphanet:3145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrogenic diabetes insipidus-intracranial calcification syndrome","secondary_identifiers":["GARD:259","SCTID:716200002","UMLS:C1857297","OMIM:221995","MEDGEN:387791"],"synonyms":[{"name":"Schofer Beetz Bohl syndrome","type":"related"},{"name":"Schofer-Beetz-Bohl syndrome","type":"exact"},{"name":"diabetes insipidus nephrogenic intellectual disability and intracerebral calcification","type":"related"},{"name":"diabetes insipidus nephrogenic mental retardation and intracerebral calcification","type":"related"},{"name":"diabetes insipidus, nephrogenic, with intellectual disability and intracerebral calcification","type":"related"},{"name":"diabetes insipidus, nephrogenic, with mental retardation and intracerebral calcification","type":"related"}],"termid":"MONDO:0009099","xrefs":{"Monarch":{"xref_id":"0009099"}}}


id: PBO:0039069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute RISC component 1","termid":"PBO:0039069"}


id: PBO:0041635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C intronic transcript 1","termid":"PBO:0041635"}


id: PBO:0083628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase targeting centromere-binding protein Cse4p; mediates polyubiquitination and degradation of histone H3 variant Cse4p; ubiquitination of Cse4p may be antagonized by Scm3p; interacts with the FACT complex preventing mislocalization of Cse4p to euchromatin independent of Slx5p; formyl-methionine/N-recognin component of N-end rule pathway mediating destruction of formylated cytosolic proteins elevated in response to starvation or stationary phase entry","termid":"PBO:0083628"}


id: PBO:0064974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 30, pseudogene","termid":"PBO:0064974"}


id: PBO:0071643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 7","termid":"PBO:0071643"}


id: GO:0033945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of cellobiose from the reducing end of xyloglucans consisting of a beta-(1->4) linked glucan carrying alpha-D-xylosyl groups on O-6 of the glucose residues. To be a substrate, the first residue must be unsubstituted, the second residue may bear a xylosyl group, whether further glycosylated or not, and the third residue, which becomes the new terminus by the action of the enzyme, is preferably xylosylated, but this xylose residue must not be further substituted.","definition_xrefs":["EC:3.2.1.150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"oligoxyloglucan reducing-end-specific cellobiohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.150-RXN"],"synonyms":[{"name":"oligoxyloglucan reducing end-specific cellobiohydrolase activity","type":"related"},{"name":"oligoxyloglucan reducing-end cellobiohydrolase activity","type":"related"}],"termid":"GO:0033945"}


id: PBO:0027046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_2-oxoglutarate_dioxygenase_activity","termid":"PBO:0027046"}


id: PR:Q9UUK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gcn5 gene.","definition_xrefs":["UniProtKB:Q9UUK2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase gcn5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.05","synonyms":[{"name":"Spom972h-gcn5","type":"exact"}],"termid":"PR:Q9UUK2"}


id: GO:1904441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thyroid gland epithelial cell proliferation.","definition_xrefs":["PMID:17646383","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"thyroid gland epithelial cell proliferation","termid":"GO:1990789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thyroid gland epithelial cell proliferation","synonyms":[{"name":"regulation of Hurthle cell proliferation","type":"narrow"},{"name":"regulation of thyroid follicular cell proliferation","type":"narrow"}],"termid":"GO:1904441"}


id: GO:0042750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism enters and maintains a period of dormancy in which to pass the winter. It is characterized by narcosis and by sharp reduction in body temperature and metabolic activity and by a depression of vital signs.","definition_xrefs":["PMID:1945046","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hibernation","secondary_identifiers":["Wikipedia:Hibernation"],"termid":"GO:0042750"}


id: PBO:0042006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 61","termid":"PBO:0042006"}


id: PBO:0057486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 604","termid":"PBO:0057486"}


id: MONDO:0003292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well-circumscribed benign smooth muscle neoplasm arising from the anus. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum leiomyoma","termid":"MONDO:0004125"},{"relation_name":"is_a","term_name":"benign neoplasm of anus","termid":"MONDO:0021469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"anus leiomyoma","secondary_identifiers":["DOID:5134","NCIT:C5608","MEDGEN:231369","UMLS:C1332266"],"synonyms":[{"name":"anal leiomyoma","type":"exact"},{"name":"anus leiomyoma","type":"exact"},{"name":"leiomyoma of anus","type":"exact"},{"name":"leiomyoma of the anus","type":"exact"}],"termid":"MONDO:0003292","xrefs":{"Monarch":{"xref_id":"0003292"}}}


id: PBO:0047999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 1","termid":"PBO:0047999"}


id: PBO:0063272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 18 pseudogene","termid":"PBO:0063272"}


id: GO:0098824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The sulfation of peptidyl-cysteine to form S-sulfo-L-cysteine.","definition_xrefs":["RESID:AA0171"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine sulfation (obsolete GO:0098824)","termid":"GO:0098824"}


id: PBO:0062238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BB member 1 pseudogene","termid":"PBO:0062238"}


id: PR:O59945
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A plastin-3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fimbrin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.06c","secondary_identifiers":["UniProtKB:O59945"],"synonyms":[{"name":"Spom972h-PLS3","type":"exact"}],"termid":"PR:O59945"}


id: PBO:0040070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin beta 1","termid":"PBO:0040070"}


id: GO:0046058
data:
  {"annotated_genes":["SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"cyclic purine nucleotide metabolic process","termid":"GO:0052652"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"cAMP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3',5' cAMP metabolic process","type":"exact"},{"name":"3',5' cAMP metabolism","type":"exact"},{"name":"3',5'-cAMP metabolic process","type":"exact"},{"name":"3',5'-cAMP metabolism","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate metabolic process","type":"exact"},{"name":"adenosine 3',5'-cyclophosphate metabolism","type":"exact"},{"name":"cAMP generating peptide activity","type":"related"},{"name":"cAMP metabolism","type":"exact"},{"name":"cyclic AMP metabolic process","type":"exact"},{"name":"cyclic AMP metabolism","type":"exact"}],"termid":"GO:0046058","terms_by_termid":{"GO:0006198":null}}


id: GO:0090657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The telomere maintenance process in which telomeric loops are disassembled to permit efficient telomere replication.","definition_xrefs":["GOC:nc","GOC:BHF_telomere","GOC:BHF","PMID:22579284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0006259","GO:0032200","GO:0008150"],"is_obsolete":false,"name":"telomeric loop disassembly","synonyms":[{"name":"T loop disassembly","type":"exact"},{"name":"t-loop disassembly","type":"exact"}],"termid":"GO:0090657"}


id: MONDO:0002666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pancreatic ductal adenocarcinoma with poor prognosis. It is characterized by the presence of malignant signet ring cells infiltrating the pancreatic parenchyma in an individual cell pattern.","definition_xrefs":["NCIT:C5720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signet ring cell carcinoma","termid":"MONDO:0005092"},{"relation_name":"is_a","term_name":"pancreatic ductal adenocarcinoma","termid":"MONDO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic signet ring cell adenocarcinoma","secondary_identifiers":["MEDGEN:233834","UMLS:C1335317","DOID:3497"],"synonyms":[{"name":"pancreas signet ring cell carcinoma","type":"exact"},{"name":"pancreatic signet Ring cell carcinoma","type":"exact"},{"name":"pancreatic signet ring cell carcinoma","type":"exact"},{"name":"signet Ring cell carcinoma of pancreas","type":"exact"},{"name":"signet Ring cell carcinoma of the pancreas","type":"exact"}],"termid":"MONDO:0002666","xrefs":{"Monarch":{"xref_id":"0002666"}}}


id: PBO:0000524
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STErile","termid":"PBO:0000524"}


id: PBO:0088648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination mediator, RecA family ATPase Rad57/Rhp57","termid":"PBO:0088648"}


id: GO:0120522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a short-chain 2,3-saturated fatty acyl-CoA + O2 = a short-chain (2E)-enoyl-CoA + H2O2.","definition_xrefs":["RHEA:78859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA oxidase activity","termid":"GO:0003997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"short-chain fatty acyl-CoA oxidase activity","termid":"GO:0120522"}


id: MONDO:0018843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A embryonal carcinoma that involves the central nervous system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"embryonal carcinoma","termid":"MONDO:0005440"},{"relation_name":"is_a","term_name":"central nervous system nongerminomatous germ cell tumor","termid":"MONDO:0020574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"embryonal carcinoma of the central nervous system","secondary_identifiers":["DOID:7232","MEDGEN:272566","NCIT:C7010","GARD:18836","ONCOTREE:BEC","Orphanet:48736","UMLS:C1333377"],"synonyms":[{"name":"central nervous system embryonal carcinoma","type":"exact"},{"name":"embryonal carcinoma","type":"related"},{"name":"embryonal carcinoma of CNS","type":"exact"},{"name":"embryonal carcinoma of the CNS","type":"exact"},{"name":"embryonal carcinoma of the central nervous system","type":"exact"}],"termid":"MONDO:0018843","xrefs":{"Monarch":{"xref_id":"0018843"}}}


id: PATO:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's scalar absolute value of the rate of change of the bearer's position.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Velocity"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speed","synonyms":[{"name":"velocity","type":"related"}],"termid":"PATO:0000008"}


id: GO:0050483
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5'-IMP + H2O = inosine + phosphate.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete IMP 5'-nucleotidase activity (obsolete GO:0050483)","secondary_identifiers":["MetaCyc:RXN-7607"],"synonyms":[{"name":"IMP 5' nucleotidase activity","type":"exact"},{"name":"IMP-GMP specific 5'-nucleotidase activity","type":"related"}],"termid":"GO:0050483"}


id: GO:1904054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cholangiocyte proliferation.","definition_xrefs":["GOC:TermGenie","PMID:24434010","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"cholangiocyte proliferation","termid":"GO:1990705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cholangiocyte proliferation","synonyms":[{"name":"regulation of hepatoblast proliferation","type":"exact"}],"termid":"GO:1904054"}


id: GO:0000423
data:
  {"annotated_genes":["SJAG_01251","SJAG_04655","SJAG_01876","SJAG_01382","SJAG_03100","SJAG_01283","SJAG_00004","SJAG_02414","SJAG_00059","SJAG_03435","SJAG_01274","SJAG_01135","SJAG_04502","SJAG_00079","SJAG_05017","SJAG_01073","SJAG_02699","SJAG_05261","SJAG_04219","SJAG_00645","SJAG_04232"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60779,65945,66153,70940,72526,72937,72990,73484,73841,77134,77313,77412,79989,80021,80439,93242,94962,95308,100318,111035,115610],"is_not":false,"summary":null,"term":"GO:0000423"}]},"cv_name":"biological_process","definition":"The selective autophagy process in which a mitochondrion is degraded by macroautophagy.","definition_xrefs":["PMID:15798367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy of mitochondrion","termid":"GO:0000422"},{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00059":null,"SJAG_00079":null,"SJAG_00645":null,"SJAG_01073":null,"SJAG_01135":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01876":null,"SJAG_02414":null,"SJAG_02699":null,"SJAG_03100":null,"SJAG_03435":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_05017":null,"SJAG_05261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"mitophagy","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-5205647","Wikipedia:Mitophagy"],"synonyms":[{"name":"macromitophagy","type":"exact"}],"termid":"GO:0000423","terms_by_termid":{"GO:0000423":null}}


id: MONDO:1010834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilson disease that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wilson disease, non-human animal","termid":"MONDO:1010164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilson disease, pig","secondary_identifiers":["OMIA:001071-9823"],"termid":"MONDO:1010834","xrefs":{"Monarch":{"xref_id":"1010834"}}}


id: PBO:0071694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L38","termid":"PBO:0071694"}


id: PBO:0090225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein Sgd1","termid":"PBO:0090225"}


id: PR:Q9UT88
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT88"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomevalonate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.01c","synonyms":[{"name":"Spom972h-erg8","type":"exact"}],"termid":"PR:Q9UT88"}


id: GO:0060476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin-based process in which a protein is transported to, or maintained in, a specific location in the sperm as part of the acrosome reaction.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"is_a","term_name":"actin filament-based process","termid":"GO:0030029"},{"relation_name":"part_of","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization involved in acrosome reaction","synonyms":[{"name":"protein localisation involved in acrosome reaction","type":"exact"}],"termid":"GO:0060476"}


id: GO:0034927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pyrene + O2 + 2 H+ + 2 e- = pyrene-1,2-oxide + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrene 1,2-monooxygenase activity (obsolete GO:0034927)","termid":"GO:0034927"}


id: PBO:0030495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stabilized_iron-sulfur_cluster_binding","termid":"PBO:0030495"}


id: MONDO:0013844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stutter disorder","termid":"MONDO:0000723"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stuttering, familial persistent, 4","secondary_identifiers":["MEDGEN:766317","OMIM:614668","UMLS:C3553403"],"synonyms":[{"name":"STUT4","type":"exact"},{"name":"stuttering, familial persistent, 4","type":"exact"}],"termid":"MONDO:0013844","xrefs":{"Monarch":{"xref_id":"0013844"}}}


id: GO:0008613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of a diuretic hormone, a peptide hormone that, upon receptor binding, regulates water balance and fluid secretion.","definition_xrefs":["PMID:8618894","GOC:mah","InterPro:IPR003621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0003674","GO:0098772","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"diuretic hormone activity","termid":"GO:0008613"}


id: GO:1903486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any establishment of actomyosin contractile ring localization that is involved in mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of mitotic actomyosin contractile ring localization (obsolete GO:1903486)","termid":"GO:1903486"}


id: GO:0052727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-antheraxanthin = all-trans-capsanthin.","definition_xrefs":["RHEA:17373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"capsanthin synthase activity","secondary_identifiers":["MetaCyc:RXN-7947"],"synonyms":[{"name":"CCS","type":"broad"},{"name":"capsanthin-capsorubin synthase activity","type":"broad"},{"name":"ketoxanthophyll synthase activity","type":"broad"}],"termid":"GO:0052727"}


id: PATO:0002228
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tapered shape quality inhering in a bearer by virtue of the bearer's tapering gradually to a sharp point.","direct_ancestors":[{"relation_name":"is_a","term_name":"tapered","termid":"PATO:0001500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acuminate","termid":"PATO:0002228"}


id: MONDO:0009476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atresia of small intestine is a special form of intestinal atresia with absence of mesentery, which is most likely due to an intrauterine intestinal vascular accident. Newborns are usually preterm infants with low birth-weights, that encounter feeding difficulties (including vomiting with initial feeds, which may later worsened and the abdomen becomes progressively distended) as well as failure to thrive. Affected children present disrupted bowel loops assuming a spiral configuration resembling an 'apple peel' and may have less than half of the normal length of the small bowel and a physiologically short bowel. Atresia of small intestine is characterized by jejunal atresia near the ligament of Treitz, foreshortened bowel, and a large mesenteric gap. The bowel distal to the atresia is precariously supplied. Atresia of small intestine may be a manifestation of cystic fibrosis. The most important cause of mortality is short bowel syndrome, encountered in 65% of cases.","definition_xrefs":["Orphanet:1201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"small intestine disorder","termid":"MONDO:0024635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"atresia of small intestine","secondary_identifiers":["OMIM:243600","icd11.foundation:1949256262","NCIT:C98828","GARD:140","MedDRA:10010626","MESH:C538260","UMLS:C0266172","MEDGEN:78590"],"synonyms":[{"name":"APSB","type":"related"},{"name":"Jejunal Atresia","type":"exact"},{"name":"Jejunoileal atresia","type":"exact"},{"name":"apple peel small bowel syndrome","type":"related"},{"name":"apple peel syndrome","type":"exact"},{"name":"apple-peel intestinal atresia","type":"related"},{"name":"atresia of the small intestine","type":"exact"},{"name":"congenital atresia of the small intestine","type":"related"},{"name":"congenital small intestine atresia","type":"exact"},{"name":"familial apple peel jejunal atresia","type":"related"},{"name":"intestinal atresia type IIIb","type":"exact"},{"name":"jejunal atresia","type":"exact"},{"name":"small intestinal atresia","type":"exact"},{"name":"small intestine atresia","type":"exact"}],"termid":"MONDO:0009476","xrefs":{"Monarch":{"xref_id":"0009476"}}}


id: PBO:0050447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein U like 1","termid":"PBO:0050447"}


id: PBO:0027313
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_template_switch-mediated_chromosomal_rearrangement_during_replication_fork_processing","termid":"PBO:0027313"}


id: MONDO:1011625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Xanthinuria that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthinuria, non-human animal","termid":"MONDO:1011450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthinuria, goat","secondary_identifiers":["OMIA:001283-9925"],"termid":"MONDO:1011625","xrefs":{"Monarch":{"xref_id":"1011625"}}}


id: MONDO:0019422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked syndromic intellectual disability characterized by intellectual deficit, hypotonia, absent deep tendon reflexes, tapered fingers and excessive fingerprint arches, genu valgum, a characteristic face and small teeth. It has been described in four males from two generations of one family. The causative gene appears to be located in the q13 region of the X chromosome.","definition_xrefs":["Orphanet:85325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"X-linked intellectual disability, Stevenson type","secondary_identifiers":["UMLS:C4305077","MEDGEN:930746","SCTID:718909001","GARD:19058"],"termid":"MONDO:0019422","xrefs":{"Monarch":{"xref_id":"0019422"}}}


id: GO:0090710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-5-phosphomevalonate + ATP = ADP + CO2 + isopentenyl phosphate + phosphate.","definition_xrefs":["RHEA:40955","PMID:24375100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"phosphomevalonate decarboxylase activity","secondary_identifiers":["EC:4.1.1.99","MetaCyc:RXN-10067"],"termid":"GO:0090710"}


id: PBO:0077327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 63C","termid":"PBO:0077327"}


id: MONDO:0001992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the rete testis","direct_ancestors":[{"relation_name":"is_a","term_name":"rete testis neoplasm","termid":"MONDO:0003562"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"testicular cancer","termid":"MONDO:0005447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rete testis adenocarcinoma","secondary_identifiers":["UMLS:C0863024","DOID:14544","MEDGEN:209023","NCIT:C8955"],"synonyms":[{"name":"adenocarcinoma of rete testis","type":"exact"},{"name":"adenocarcinoma of the rete testis","type":"exact"},{"name":"carcinoma, rete testis, malignant","type":"exact"},{"name":"rete testis adenocarcinoma","type":"exact"}],"termid":"MONDO:0001992","xrefs":{"Monarch":{"xref_id":"0001992"}}}


id: PBO:0073385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 1B, histone lysine methyltransferase","termid":"PBO:0073385"}


id: MONDO:0800322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"membranous obstruction of inferior vena cava","secondary_identifiers":["MEDGEN:107472","UMLS:C0546323"],"synonyms":[{"name":"MOVC","type":"exact"}],"termid":"MONDO:0800322","xrefs":{"Monarch":{"xref_id":"0800322"}}}


id: MOD:01167
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod","definition_xrefs":["Unimod:424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdenum pterin containing modification","termid":"MOD:00744"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdopterin guanine dinucleotide","synonyms":[{"name":"MolybdopterinGD","type":"related"},{"name":"molybdenum bis(molybdopterin guanine dinucleotide)","type":"related"}],"termid":"MOD:01167"}


id: GO:0009425
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of the three major substructures of the bacterial-type flagellum, the basal body is embedded in the cell envelope (the plasma membrane, peptidoglycan cell wall, and, if one is present, the outer membrane); it houses the secretion apparatus that exports the more distal components and the flagellar motor.","definition_xrefs":["PMID:24697492","GOC:mtg_sensu","PMID:10572114","GOC:cilia","PMID:12624192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum","termid":"GO:0009288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body","synonyms":[{"name":"flagellar basal body","type":"broad"},{"name":"flagellin-based flagellum basal body","type":"exact"}],"termid":"GO:0009425"}


id: FYPO:0004046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains four nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PMID:21931816","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"fragmented septum","termid":"FYPO:0004042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000032","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"tetranucleate vegetative cell with fragmented septum","synonyms":[{"name":"tetranucleate cells with fragmented septum during vegetative growth","type":"exact"},{"name":"tetranucleate vegetative cell with fragmented septum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004046"}


id: GO:1901245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a B cell receptor (BCR) from the plasma membrane to the inside of the cell, which results in positive regulation of toll-like receptor 9 (TLR9) signaling. For example, internalized BCR signals to recruit TLR9 from multiple small endosomes to large autophagosome-like compartments to enhance TLR9 signaling.","definition_xrefs":["PMID:18513998","GOC:TermGenie","GOC:bf","GOC:amm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of toll-like receptor 9 signaling pathway","termid":"GO:0034165"},{"relation_name":"is_a","term_name":"B cell receptor internalization","termid":"GO:0036300"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction by receptor internalization","termid":"GO:0038010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0016192","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 9 signaling pathway by B cell receptor internalization","synonyms":[{"name":"BCR-induced TLR9 recruitment","type":"narrow"},{"name":"positive regulation of TLR9 signaling pathway by B cell receptor internalization","type":"exact"},{"name":"positive regulation of TLR9 signaling pathway by BCR endocytosis","type":"exact"},{"name":"positive regulation of TLR9 signaling pathway by BCR receptor internalization","type":"exact"},{"name":"positive regulation of toll-like receptor 9 signaling pathway by BCR endocytosis","type":"exact"},{"name":"positive regulation of toll-like receptor 9 signaling pathway by BCR receptor internalization","type":"exact"},{"name":"positive regulation of toll-like receptor 9 signalling pathway by B cell receptor internalization","type":"exact"},{"name":"positive regulation of toll-like receptor 9 signalling pathway by BCR endocytosis","type":"exact"},{"name":"positive regulation of toll-like receptor 9 signalling pathway by BCR receptor internalization","type":"exact"}],"termid":"GO:1901245"}


id: MONDO:1012731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cerebellar ataxia that occurs in dogs due to a mutation in the SEL1L gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, dog","termid":"MONDO:1012957"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive early-onset cerebellar ataxia, SEL1L-related, dog","secondary_identifiers":["OMIA:001692-9615"],"synonyms":[{"name":"ataxia, cerebellar, progressive early-onset, SEL1L-related, dog","type":"exact"}],"termid":"MONDO:1012731","xrefs":{"Monarch":{"xref_id":"1012731"}}}


id: PBO:0059793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 19","termid":"PBO:0059793"}


id: PBO:0079034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 3-1","termid":"PBO:0079034"}


id: FYPO:0006950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of myo-inositol measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular myo-inositol level","synonyms":[{"name":"increased cellular myo-inositol level during mitotic cell cycle","type":"related"},{"name":"increased cellular myo-inositol level during vegetative growth","type":"exact"},{"name":"increased myo-inositol accumulation","type":"related"}],"termid":"FYPO:0006950"}


id: PBO:0017940
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Long Chain Fatty acyl-CoA synthetase","termid":"PBO:0017940"}


id: GO:0045671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of osteoclast differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte differentiation","termid":"GO:0002762"},{"relation_name":"is_a","term_name":"regulation of osteoclast differentiation","termid":"GO:0045670"},{"relation_name":"negatively_regulates","term_name":"osteoclast differentiation","termid":"GO:0030316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of osteoclast differentiation","synonyms":[{"name":"down regulation of osteoclast differentiation","type":"exact"},{"name":"down-regulation of osteoclast differentiation","type":"exact"},{"name":"downregulation of osteoclast differentiation","type":"exact"},{"name":"inhibition of osteoclast differentiation","type":"narrow"}],"termid":"GO:0045671"}


id: PBO:0016940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug74","termid":"PBO:0016940"}


id: PBO:0076689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 6","termid":"PBO:0076689"}


id: PBO:0111938
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-MYND type","termid":"PBO:0111938"}


id: PBO:0067554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 705, pseudogene","termid":"PBO:0067554"}


id: PBO:0082013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger containing ubiquitin peptidase 1","termid":"PBO:0082013"}


id: MONDO:0018781
data:
  {"annotated_genes":["SJAG_00104","SJAG_04565"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86065,86064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009440"}]},"cv_name":"mondo","definition":"Keratitis (and hystrix-like) ichthyosis deafness (KID/HID) syndrome is a rare congenital ectodermal disorder characterized by vascularizing keratitis, hyperkeratotic skin lesions and hearing loss.","definition_xrefs":["Orphanet:477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_04565":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"KID syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3665333","MedDRA:10048786","MESH:C536168","SCTID:2625009","ICD9:759.89","NANDO:1200621","OMIMPS:148210","NORD:1326","MEDGEN:777082","NANDO:2200996","GARD:3113"],"synonyms":[{"name":"KID/HID syndrome","type":"exact"},{"name":"Keratitis Ichthyosis Deafness Syndrome","type":"exact"},{"name":"Senter syndrome","type":"exact"},{"name":"ichthyosis hystrix Rheydt type","type":"exact"},{"name":"keratitis, ichthyosis, and deafness (KID) syndrome","type":"related"},{"name":"keratitis-ichthyosis-deafness/Hystrix-like ichthyosis-deafness syndrome","type":"exact"}],"termid":"MONDO:0018781","terms_by_termid":{"MONDO:0009440":null},"xrefs":{"Monarch":{"xref_id":"0018781"}}}


id: PBO:0045006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodothyronine deiodinase 1","termid":"PBO:0045006"}


id: PBO:0005460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichothecene 3-O-acetyltransferase pseudogene","termid":"PBO:0005460"}


id: GO:0051258
data:
  {"annotated_genes":["SJAG_03540","SJAG_01894","SJAG_02737","SJAG_01993","SJAG_00677","SJAG_03835","SJAG_04100","SJAG_04479","SJAG_02624","SJAG_00521","SJAG_02700","SJAG_07018","SJAG_03086","SJAG_02566","SJAG_02609","SJAG_04982","SJAG_00279","SJAG_01384","SJAG_02761","SJAG_02886","SJAG_01215","SJAG_02245","SJAG_01268","SJAG_01756","SJAG_00856"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65117,99169,98054,66847,94153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030041"},{"annotations":[117332],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030954"},{"annotations":[79503,80536,76055,92654],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[72107,79366,71531],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007020"},{"annotations":[117583,117337,100720,106813,100423,101325],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051415"},{"annotations":[101326,119065],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051417"},{"annotations":[79801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046785"},{"annotations":[77630,67344,79762,68476,76966],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"The process of creating protein polymers, compounds composed of a large number of component monomers; polymeric proteins may be made up of different or identical monomers. Polymerization occurs by the addition of extra monomers to an existing poly- or oligomeric protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_00856":null,"SJAG_01215":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01756":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02609":null,"SJAG_02624":null,"SJAG_02700":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03086":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04100":null,"SJAG_04479":null,"SJAG_04982":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"protein polymerization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein polymer biosynthesis","type":"exact"},{"name":"protein polymer biosynthetic process","type":"exact"},{"name":"protein polymer formation","type":"exact"}],"termid":"GO:0051258","terms_by_termid":{"GO:0007020":null,"GO:0030041":null,"GO:0030833":null,"GO:0030954":null,"GO:0046785":null,"GO:0051016":null,"GO:0051415":null,"GO:0051417":null}}


id: PBO:0047199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 216 member B","termid":"PBO:0047199"}


id: PBO:0018256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus-end directed microtubule motor, dynein heavy chain Dhc1","termid":"PBO:0018256"}


id: FYPO:0002460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, branched, septated, elongated, and is curved along the long axis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable curved elongated vegetative cell","termid":"FYPO:0002215"},{"relation_name":"is_a","term_name":"viable branched, elongated vegetative cell","termid":"FYPO:0002459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"viable branched, curved, elongated vegetative cell","secondary_identifiers":["FYPO:0002477"],"synonyms":[{"name":"viable branched curved cell","type":"exact"},{"name":"viable branched, curved cell during vegetative growth","type":"exact"},{"name":"viable branched, curved septated cell","type":"exact"},{"name":"viable branched, curved vegetative cell","type":"exact"},{"name":"viable branched, curved vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, curved, elongated cell during vegetative growth","type":"exact"},{"name":"viable branched, curved, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, elongated, curved septated cell","type":"exact"},{"name":"viable branched, long, curved, septated cell","type":"exact"},{"name":"viable curved branched cell","type":"exact"},{"name":"viable elongated branched curved cell","type":"exact"}],"termid":"FYPO:0002460"}


id: GO:0051756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the centromeres of sister chromatids are physically detached from each other during meiosis.","definition_xrefs":["PMID:16325576","GOC:ai","PMID:14730319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromere separation","termid":"GO:0034510"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic sister chromatid segregation","termid":"GO:0045144"},{"relation_name":"part_of","term_name":"meiotic sister chromatid separation","termid":"GO:0051757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic sister chromatid centromere separation","termid":"GO:0051756"}


id: GO:1901637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of maintenance of presynaptic active zone structure.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of maintenance of presynaptic active zone structure (obsolete GO:1901637)","synonyms":[{"name":"activation of maintenance of presynaptic active zone structure","type":"narrow"},{"name":"positive regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"up regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"up-regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"upregulation of maintenance of presynaptic active zone structure","type":"exact"}],"termid":"GO:1901637"}


id: GO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior directed towards obtaining some goal, considered to be a learned response to a situation.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"instrumental aggressive behavior","synonyms":[{"name":"instrumental aggression","type":"exact"}],"termid":"GO:0002126"}


id: PBO:0057423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548x-2","termid":"PBO:0057423"}


id: PBO:0016085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related endocytic adaptor Any1","termid":"PBO:0016085"}


id: PBO:0080895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTHDF3 divergent transcript","termid":"PBO:0080895"}


id: FYPO:0002144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues N-terminal to proline residues (i.e. in Thr-Pro sequences) occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein threonine phosphorylation at Thr-Pro site during vegetative growth (obsolete FYPO:0002144)","synonyms":[{"name":"increased protein threonine phosphorylation at TP site during vegetative growth","type":"exact"},{"name":"increased protein threonine phosphorylation at Thr-Pro site during mitotic cell cycle","type":"related"},{"name":"increased protein threonine phosphorylation at threonine-proline site during vegetative growth","type":"exact"}],"termid":"FYPO:0002144"}


id: GO:0061696
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is a protein hormone secreted by gonadotrope cells of the anterior pituitary of vertebrates. capable of regulating normal growth, sexual development, and reproductive function.","definition_xrefs":["PMID:11420129","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"pituitary gonadotropin complex","termid":"GO:0061696"}


id: PBO:0064278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing J1","termid":"PBO:0064278"}


id: GO:2000627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of miRNA catabolic process","termid":"GO:2000625"},{"relation_name":"is_a","term_name":"positive regulation of miRNA metabolic process","termid":"GO:2000630"},{"relation_name":"positively_regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of miRNA catabolic process","synonyms":[{"name":"positive regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000627"}


id: PBO:0027590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_following_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0027590"}


id: GO:1902960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["GO_REF:0000059","GOC:sjp","GOC:TermGenie","PMID:24577224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endopeptidase activity","termid":"GO:0010951"},{"relation_name":"is_a","term_name":"negative regulation of amyloid precursor protein catabolic process","termid":"GO:1902992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","synonyms":[{"name":"down regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"down regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"down regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"down regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"down regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"down regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"down regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"down-regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"down-regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"down-regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"down-regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"down-regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"down-regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"down-regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"down-regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"down-regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"down-regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"down-regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"down-regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"downregulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"downregulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"downregulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"downregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"downregulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"downregulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"inhibition of aspartate protease activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of aspartate protease activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of aspartate protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of aspartate protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of aspartate protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"inhibition of aspartic endopeptidase activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of aspartic endopeptidase activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"inhibition of aspartic protease activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of aspartic protease activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of aspartic protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of aspartic protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of aspartic protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"inhibition of aspartic-type endopeptidase activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of aspartic-type endopeptidase activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"inhibition of aspartyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of aspartyl protease activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of aspartyl protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"inhibition of carboxyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of carboxyl protease activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of carboxyl protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"negative regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"negative regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"negative regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"negative regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"negative regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"negative regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"negative regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"negative regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"negative regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"negative regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"negative regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902960"}


id: PBO:0052573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KMT5A pseudogene 1","termid":"PBO:0052573"}


id: GO:1903474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that maintains the mitotic actinomyosin contractile ring at the plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:19139265","PMID:28784611","GOC:vw","GO_REF:0000060","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete anchoring of the mitotic actomyosin contractile ring to the plasma membrane (obsolete GO:1903474)","synonyms":[{"name":"cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903474"}


id: PBO:0029770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_elongated_tapered_cells_(obsolete_FYPO:0002469)","termid":"PBO:0029770"}


id: GO:0070368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of hepatocyte differentiation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of hepatocyte differentiation","termid":"GO:0070366"},{"relation_name":"positively_regulates","term_name":"hepatocyte differentiation","termid":"GO:0070365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatocyte differentiation","synonyms":[{"name":"activation of hepatocyte differentiation","type":"narrow"},{"name":"positive regulation of liver cell differentiation","type":"exact"},{"name":"stimulation of hepatocyte differentiation","type":"narrow"},{"name":"up regulation of hepatocyte differentiation","type":"exact"},{"name":"up-regulation of hepatocyte differentiation","type":"exact"},{"name":"upregulation of hepatocyte differentiation","type":"exact"}],"termid":"GO:0070368"}


id: PBO:0051819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 4","termid":"PBO:0051819"}


id: MONDO:0017147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic pulmonary arterial hypertension (IPAH) is a sporadic form of pulmonary arterial hypertension (PAH) characterized by elevated pulmonary arterial resistance leading to right heart failure. IPAH is progressive and potentially fatal and not associated with an underlying condition or family history of PAH.","definition_xrefs":["Orphanet:275766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary arterial hypertension","termid":"MONDO:0015924"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic pulmonary arterial hypertension","secondary_identifiers":["ICD9:416.0","MedDRA:10065151","GARD:21025","icd11.foundation:265520344","MEDGEN:468368","NANDO:2201046","UMLS:C3203102","SCTID:697898008"],"synonyms":[{"name":"IPAH","type":"exact"},{"name":"primary pulmonary arterial hypertension","type":"exact"}],"termid":"MONDO:0017147","xrefs":{"Monarch":{"xref_id":"0017147"}}}


id: FYPO:0002064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a 3'-5'-exoribonuclease activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 3'-5'-exoribonuclease activity","termid":"FYPO:0002063"},{"relation_name":"is_a","term_name":"abolished ribonuclease activity","termid":"FYPO:0006301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished 3'-5'-exoribonuclease activity","synonyms":[{"name":"3'-5'-exoribonuclease activity abolished","type":"exact"}],"termid":"FYPO:0002064"}


id: MONDO:0007417
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87022],"is_not":false,"summary":null,"term":"MONDO:0007417"}]},"cv_name":"mondo","definition":"Darier disease (DD) is a keratinization disorder characterized by the development of keratotic papules in seborrheic areas and specific nail anomalies.","definition_xrefs":["Orphanet:218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Darier disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C84665","OMIM:124200","GARD:6243","MEDGEN:5956","ICD9:757.39","MESH:D007644","DOID:2734","MedDRA:10023369","Wikipedia:Darier%27s_disease","icd11.foundation:643994486","SCTID:48611009","UMLS:C0022595"],"synonyms":[{"name":"DAR","type":"related"},{"name":"Darier White disease","type":"related"},{"name":"Darier disease","type":"exact"},{"name":"Darier disease, acral hemorrhagic type","type":"related"},{"name":"Darier disease, segmental","type":"related"},{"name":"Darier's disease","type":"exact"},{"name":"Darier-White disease","type":"exact"},{"name":"Keratosis Follicularis","type":"exact"},{"name":"dar","type":"related"},{"name":"keratosis follicularis","type":"exact"}],"termid":"MONDO:0007417","terms_by_termid":{"MONDO:0007417":null},"xrefs":{"Monarch":{"xref_id":"0007417"}}}


id: GO:0033569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lactoferrin from one side of a membrane to the other.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transporter activity","termid":"GO:0008320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0140318","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"lactoferrin transmembrane transporter activity","termid":"GO:0033569"}


id: GO:1902679
data:
  {"annotated_genes":["SJAG_02385","SJAG_03473","SJAG_00441","SJAG_01707","SJAG_02981","SJAG_03067","SJAG_02846","SJAG_02255","SJAG_00266","SJAG_03143","SJAG_00926","SJAG_04921","SJAG_00290","SJAG_02048","SJAG_04607","SJAG_02752","SJAG_04268","SJAG_01311","SJAG_02104","SJAG_00987","SJAG_04512","SJAG_00410","SJAG_04539","SJAG_04613","SJAG_00124","SJAG_04249","SJAG_02730","SJAG_03319","SJAG_04584","SJAG_00861","SJAG_02444","SJAG_01728","SJAG_00996","SJAG_00142","SJAG_02898","SJAG_05343","SJAG_02858","SJAG_01680","SJAG_01000","SJAG_00969","SJAG_01157","SJAG_00792","SJAG_01799","SJAG_01230","SJAG_01254","SJAG_03845","SJAG_01804","SJAG_03081","SJAG_04039","SJAG_04312","SJAG_04381","SJAG_04026","SJAG_01199","SJAG_00802","SJAG_00163"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060195"},{"annotations":[101411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045892"},{"annotations":[79837,104797,106862,111259,77110,111522,77370,106614,111097,108599,72279,73604,94069,108337,96618,112471,101335,87912,75709,92465,92489,103897,93723,104602,106170,108940,99218,117762,91583,70516,94212,106267,107114,113357,80772,114213,74664,74208,104297,107094,94559,109383,114648,94974,72569,74015,93624,70953,95058,74438,91510,102190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000122"},{"annotations":[74065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"},{"annotations":[101336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010621"},{"annotations":[118329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034244"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of RNA biosynthetic process.","definition_xrefs":["GO:jl","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of RNA biosynthetic process","termid":"GO:2001141"},{"relation_name":"negatively_regulates","term_name":"RNA biosynthetic process","termid":"GO:0032774"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00142":null,"SJAG_00163":null,"SJAG_00266":null,"SJAG_00290":null,"SJAG_00410":null,"SJAG_00441":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00861":null,"SJAG_00926":null,"SJAG_00969":null,"SJAG_00987":null,"SJAG_00996":null,"SJAG_01000":null,"SJAG_01157":null,"SJAG_01199":null,"SJAG_01230":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01680":null,"SJAG_01707":null,"SJAG_01728":null,"SJAG_01799":null,"SJAG_01804":null,"SJAG_02048":null,"SJAG_02104":null,"SJAG_02255":null,"SJAG_02385":null,"SJAG_02444":null,"SJAG_02730":null,"SJAG_02752":null,"SJAG_02846":null,"SJAG_02858":null,"SJAG_02898":null,"SJAG_02981":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03143":null,"SJAG_03319":null,"SJAG_03473":null,"SJAG_03845":null,"SJAG_04026":null,"SJAG_04039":null,"SJAG_04249":null,"SJAG_04268":null,"SJAG_04312":null,"SJAG_04381":null,"SJAG_04512":null,"SJAG_04539":null,"SJAG_04584":null,"SJAG_04607":null,"SJAG_04613":null,"SJAG_04921":null,"SJAG_05343":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of RNA biosynthetic process","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of RNA anabolism","type":"exact"},{"name":"down regulation of RNA biosynthesis","type":"exact"},{"name":"down regulation of RNA biosynthetic process","type":"exact"},{"name":"down regulation of RNA formation","type":"exact"},{"name":"down regulation of RNA synthesis","type":"exact"},{"name":"down-regulation of RNA anabolism","type":"exact"},{"name":"down-regulation of RNA biosynthesis","type":"exact"},{"name":"down-regulation of RNA biosynthetic process","type":"exact"},{"name":"down-regulation of RNA formation","type":"exact"},{"name":"down-regulation of RNA synthesis","type":"exact"},{"name":"downregulation of RNA anabolism","type":"exact"},{"name":"downregulation of RNA biosynthesis","type":"exact"},{"name":"downregulation of RNA biosynthetic process","type":"exact"},{"name":"downregulation of RNA formation","type":"exact"},{"name":"downregulation of RNA synthesis","type":"exact"},{"name":"inhibition of RNA anabolism","type":"narrow"},{"name":"inhibition of RNA biosynthesis","type":"narrow"},{"name":"inhibition of RNA biosynthetic process","type":"narrow"},{"name":"inhibition of RNA formation","type":"narrow"},{"name":"inhibition of RNA synthesis","type":"narrow"},{"name":"negative regulation of RNA anabolism","type":"exact"},{"name":"negative regulation of RNA biosynthesis","type":"exact"},{"name":"negative regulation of RNA formation","type":"exact"},{"name":"negative regulation of RNA synthesis","type":"exact"}],"termid":"GO:1902679","terms_by_termid":{"GO:0000122":null,"GO:0010621":null,"GO:0016480":null,"GO:0034244":null,"GO:0045892":null,"GO:0060195":null}}


id: MONDO:0004508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the periapical tissue. It includes general, unspecified, or acute nonsuppurative inflammation. Chronic nonsuppurative inflammation is periapical granuloma. Suppurative inflammation is periapical abscess.","definition_xrefs":["MESH:D010485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periodontitis","termid":"MONDO:0005076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periapical periodontitis","secondary_identifiers":["EFO:1001391","icd11.foundation:1395124674","SCTID:39273001","UMLS:C0031030","MEDGEN:45396","DOID:823"],"synonyms":[{"name":"apical periodontitis","type":"exact"}],"termid":"MONDO:0004508","xrefs":{"Monarch":{"xref_id":"0004508"}}}


id: PBO:0066048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1 GTPase activating protein","termid":"PBO:0066048"}


id: MONDO:0010427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromic X-linked intellectual disability characterized by intellectual disability and marfanoid habitus that has material basis in mutation in the ZDHHC9 gene on chromosome Xq26.1.","definition_xrefs":["PMID:19377476","PMID:17436253","DOID:0060824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic X-linked intellectual disability Raymond type","secondary_identifiers":["UMLS:C3275406","MEDGEN:477037","GARD:15264","OMIM:300799"],"synonyms":[{"name":"MRXSR","type":"exact"},{"name":"intellectual disability, X-linked syndromic, Raymond type","type":"exact"},{"name":"intellectual disability, X-linked, syndromic, Raymond type","type":"related"},{"name":"mental retardation, X-linked syndromic, Raymond type","type":"exact"},{"name":"mental retardation, X-linked, syndromic, Raymond type","type":"related"},{"name":"syndromic X-linked intellectual disability Raymond type","type":"exact"}],"termid":"MONDO:0010427","xrefs":{"Monarch":{"xref_id":"0010427"}}}


id: MONDO:0859524
data:
  {"annotated_genes":["SJAG_04115"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86914],"is_not":false,"summary":null,"term":"MONDO:0859524"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04115":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 86","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5830340","OMIM:620280","MEDGEN:1840976"],"termid":"MONDO:0859524","terms_by_termid":{"MONDO:0859524":null},"xrefs":{"Monarch":{"xref_id":"0859524"}}}


id: GO:1903839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["GO_REF:0000059","GOC:als","GOC:TermGenie","PMID:19575011"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mRNA 3'-UTR binding (obsolete GO:1903839)","synonyms":[{"name":"activation of mRNA 3' UTR binding","type":"narrow"},{"name":"activation of mRNA 3'-UTR binding","type":"narrow"},{"name":"positive regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"up-regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up-regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"upregulation of mRNA 3' UTR binding","type":"exact"},{"name":"upregulation of mRNA 3'-UTR binding","type":"exact"}],"termid":"GO:1903839"}


id: MONDO:0035402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated exencephaly","secondary_identifiers":["ICD10CM:Q00.0","Orphanet:563612","GARD:22255"],"termid":"MONDO:0035402","xrefs":{"Monarch":{"xref_id":"0035402"}}}


id: MONDO:0022323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"allergic contact dermatitis","termid":"MONDO:0006525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"2-hydroxyethyl methacrylate sensitization","secondary_identifiers":["UMLS:C2930873","MEDGEN:443922","MESH:C535305"],"synonyms":[{"name":"2-HEMA sensitization","type":"related"},{"name":"sensitization to 2-hydroxyethyl methacrylate","type":"related"}],"termid":"MONDO:0022323","xrefs":{"Monarch":{"xref_id":"0022323"}}}


id: GO:0044419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process evolved to enable an interaction with an organism of a different species.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biological process involved in interspecies interaction between organisms","secondary_identifiers":["Reactome:R-HSA-9824443"],"synonyms":[{"name":"interaction with another species","type":"exact"},{"name":"interspecies interaction","type":"exact"},{"name":"interspecies interaction between organisms","type":"exact"},{"name":"interspecies interaction with other organisms","type":"exact"}],"termid":"GO:0044419"}


id: PBO:0075713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRGAP3 antisense RNA 2","termid":"PBO:0075713"}


id: PBO:0045884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 delta pseudogene 8","termid":"PBO:0045884"}


id: PBO:0054736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2145","termid":"PBO:0054736"}


id: PBO:0017961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation initiation factor Mti3 (predicted)","termid":"PBO:0017961"}


id: GO:0006148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inosine metabolic process","termid":"GO:0046102"},{"relation_name":"is_a","term_name":"purine ribonucleoside catabolic process","termid":"GO:0046130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"inosine catabolic process","synonyms":[{"name":"inosine breakdown","type":"exact"},{"name":"inosine catabolism","type":"exact"},{"name":"inosine degradation","type":"exact"}],"termid":"GO:0006148"}


id: PBO:0052320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1210","termid":"PBO:0052320"}


id: PR:Q09742
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC12C2.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12C2.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.01c","synonyms":[{"name":"Spom972h-SPBC12C2.01c","type":"exact"}],"termid":"PR:Q09742"}


id: PBO:0065112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C gamma","termid":"PBO:0065112"}


id: PBO:0068353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 133","termid":"PBO:0068353"}


id: PBO:0067561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 714, pseudogene","termid":"PBO:0067561"}


id: GO:0021812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The changes in adhesion between neuronal cells and glial cells as a component of the process of cerebral cortex glial-mediated radial cell migration.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:dgh","GOC:jid","PMID:12626695","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"cerebral cortex radial glia-guided migration","termid":"GO:0021801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"neuronal-glial interaction involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"neuronal-glial interaction involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021812"}


id: PBO:0031838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mating_projection_absent","termid":"PBO:0031838"}


id: GO:0070273
data:
  {"annotated_genes":["SJAG_00663","SJAG_01769","SJAG_01945","SJAG_03705","SJAG_04077","SJAG_05179","SJAG_01516"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77958,94842,99624,100461,102766,112882,118305],"is_not":false,"summary":null,"term":"GO:0070273"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol-4-phosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 4' position.","definition_xrefs":["GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate binding","termid":"GO:1901981"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01516":null,"SJAG_01769":null,"SJAG_01945":null,"SJAG_03705":null,"SJAG_04077":null,"SJAG_05179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070273","terms_by_termid":{"GO:0070273":null}}


id: MONDO:0002747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary, usually low grade adenocarcinoma of the endometrium in which the majority of the malignant epithelial cells contain abundant intracytoplasmic mucin.","definition_xrefs":["NCIT:C40144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"},{"relation_name":"is_a","term_name":"endometrium adenocarcinoma","termid":"MONDO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrial mucinous adenocarcinoma","secondary_identifiers":["UMLS:C1519859","DOID:3707","ONCOTREE:UMC","icd11.foundation:395055399","EFO:1000236","MEDGEN:276939"],"synonyms":[{"name":"endometrial mucinous adenocarcinoma","type":"exact"},{"name":"endometrium mucinous adenocarcinoma","type":"exact"},{"name":"uterine corpus mucinous adenocarcinoma","type":"related"},{"name":"uterine mucinous carcinoma","type":"related"}],"termid":"MONDO:0002747","xrefs":{"Monarch":{"xref_id":"0002747"}}}


id: MONDO:0012483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the RAX2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 11","secondary_identifiers":["MESH:C563671","UMLS:C1835865","DOID:0111018","OMIM:610381","GARD:15484","MEDGEN:322767"],"synonyms":[{"name":"CORD11","type":"exact"},{"name":"RAX2 cone-rod dystrophy","type":"exact"},{"name":"cone-rod dystrophy 11","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in RAX2","type":"exact"},{"name":"cone-rod dystrophy type 11","type":"exact"}],"termid":"MONDO:0012483","xrefs":{"Monarch":{"xref_id":"0012483"}}}


id: MONDO:0021275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papilloma that involves the eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin papilloma","termid":"MONDO:0002536"},{"relation_name":"is_a","term_name":"benign eyelid neoplasm","termid":"MONDO:0021605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"papilloma of eyelid","secondary_identifiers":["SCTID:314515006","NCIT:C4061","MEDGEN:256159","UMLS:C1142491","icd11.foundation:643260480"],"synonyms":[{"name":"eyelid papilloma","type":"exact"},{"name":"papilloma of the eyelid","type":"exact"}],"termid":"MONDO:0021275","xrefs":{"Monarch":{"xref_id":"0021275"}}}


id: PBO:0004474
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.70","termid":"PBO:0004474"}


id: PBO:0030540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_cAMP_level_during_cellular_response_to_glucose_stimulus","termid":"PBO:0030540"}


id: PATO:0000449
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000449 increased percentage (obsolete PATO:0000449)","termid":"PATO:0000449"}


id: PBO:0039103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 7","termid":"PBO:0039103"}


id: MONDO:0859516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with seizures, spasticity, and complete or partial agenesis of the corpus callosum","secondary_identifiers":["MEDGEN:1840932","UMLS:C5830296","OMIM:620250"],"termid":"MONDO:0859516","xrefs":{"Monarch":{"xref_id":"0859516"}}}


id: MONDO:0044092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder affecting the digestive tract. Its cause is unclear but may be attributed, in part, to increased collagen synthesis without adequate fibrolysis. It is characterized histologically by atrophy of mucosal villi and crypts with extensive subepithelial collagen deposition. Clinical signs include nausea, vomiting, diarrhea and weight loss. Unlike celiac sprue (celiac disease), a gluten-free diet does not predict a certain regression of the disease. The clinical course follows a progression of malabsorption leading to nutritional deficiencies, small bowel ulceration/perforation, lymphoma and infection. Prognosis is usually dismal.","definition_xrefs":["NCIT:C45426"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"collagenous sprue","secondary_identifiers":["MEDGEN:137953","UMLS:C0341299","MESH:D064068","icd11.foundation:562877246","SCTID:61738006"],"synonyms":[{"name":"Sprues, collagenous","type":"related"},{"name":"collagenous Sprues","type":"related"},{"name":"collagenous enteropathy","type":"related"},{"name":"collagenous enteropathy syndrome","type":"related"},{"name":"collagenous sprue","type":"exact"},{"name":"non-gluten intolerance syndrome","type":"related"},{"name":"non-gluten sensitive enteropathy syndrome","type":"exact"},{"name":"sprue, collagenous","type":"related"}],"termid":"MONDO:0044092","xrefs":{"Monarch":{"xref_id":"0044092"}}}


id: PBO:0041560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 67","termid":"PBO:0041560"}


id: GO:1905281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde transport, endosome to Golgi.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of retrograde transport, endosome to Golgi","termid":"GO:1905279"},{"relation_name":"positively_regulates","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of retrograde transport, endosome to Golgi","synonyms":[{"name":"activation of retrograde (endosome to Golgi) transport","type":"narrow"},{"name":"activation of retrograde transport, endosome to Golgi","type":"narrow"},{"name":"positive regulation of retrograde (endosome to Golgi) transport","type":"exact"},{"name":"up regulation of retrograde (endosome to Golgi) transport","type":"exact"},{"name":"up regulation of retrograde transport, endosome to Golgi","type":"exact"},{"name":"up-regulation of retrograde (endosome to Golgi) transport","type":"exact"},{"name":"up-regulation of retrograde transport, endosome to Golgi","type":"exact"},{"name":"upregulation of retrograde (endosome to Golgi) transport","type":"exact"},{"name":"upregulation of retrograde transport, endosome to Golgi","type":"exact"}],"termid":"GO:1905281"}


id: PBO:0047741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 4","termid":"PBO:0047741"}


id: GO:0007442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hindgut are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"digestive tract morphogenesis","termid":"GO:0048546"},{"relation_name":"part_of","term_name":"hindgut development","termid":"GO:0061525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindgut morphogenesis","termid":"GO:0007442"}


id: FYPO:0003276
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium hypochlorite. Cells stop growing (and may die) at a concentration of sodium hypochlorite that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to sodium hypochlorite","synonyms":[{"name":"hypersensitive to sodium hypochlorite","type":"exact"},{"name":"sensitive to NaOCl","type":"exact"},{"name":"sensitive to sodium hypochlorite during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium hypochlorite during vegetative growth","type":"exact"}],"termid":"FYPO:0003276"}


id: GO:0071050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of adenylyl residues at the 3' end of snoRNA class molecule (referred to as an sRNA in Archaea). In eukaryotes, this occurs in conjunction with termination of transcription of precursor snoRNA molecules and may occur post-transcriptionally on incorrectly processed molecules targeted for degradation.","definition_xrefs":["GOC:krc","GOC:dgf","PMID:18951092"],"gene_count":0,"genotype_count":0,"name":"obsolete sno(s)RNA polyadenylation (obsolete GO:0071050)","synonyms":[{"name":"sRNA polyadenylation","type":"narrow"},{"name":"snoRNA polyadenylation","type":"narrow"}],"termid":"GO:0071050"}


id: PBO:0070720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 25","termid":"PBO:0070720"}


id: PBO:0054908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2322","termid":"PBO:0054908"}


id: PBO:0055118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2537","termid":"PBO:0055118"}


id: PBO:0042725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein C","termid":"PBO:0042725"}


id: PBO:0044688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit","termid":"PBO:0044688"}


id: SO:0001513
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion of extension of a tandem repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"insertion_attribute","termid":"SO:0001512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem","termid":"SO:0001513"}


id: GO:0016239
data:
  {"annotated_genes":["SJAG_03851","SJAG_04496","SJAG_05289","SJAG_04435","SJAG_02433","SJAG_01716"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75783,106623],"is_not":false,"summary":null,"term":"GO:0016239"},{"annotations":[109022,108931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[97955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[89847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process, such as recognition of nutrient depletion, that activates or increases the rate of macroautophagy to bring cytosolic macromolecules to the vacuole/lysosome for degradation.","definition_xrefs":["GOC:go_curators","PMID:9412464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of autophagy","termid":"GO:0010508"},{"relation_name":"is_a","term_name":"regulation of macroautophagy","termid":"GO:0016241"},{"relation_name":"positively_regulates","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01716":null,"SJAG_02433":null,"SJAG_03851":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"positive regulation of macroautophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of macroautophagy","type":"narrow"},{"name":"positive regulation of starvation-induced autophagy","type":"exact"},{"name":"stimulation of macroautophagy","type":"narrow"},{"name":"up regulation of macroautophagy","type":"exact"},{"name":"up-regulation of macroautophagy","type":"exact"},{"name":"upregulation of macroautophagy","type":"exact"}],"termid":"GO:0016239","terms_by_termid":{"GO:0016239":null,"GO:0140501":null,"GO:1901098":null,"GO:2000786":null}}


id: GO:0030992
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The larger subcomplex of the intraciliary transport particle; characterized complexes have molecular weights around 550 kDa.","definition_xrefs":["GOC:cilia","PMID:19253336","PMID:14570576","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"intraciliary transport particle","termid":"GO:0030990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"intraciliary transport particle B","synonyms":[{"name":"IFT B complex","type":"related"},{"name":"IFT complex B","type":"related"},{"name":"intraflagellar transport complex B","type":"exact"},{"name":"intraflagellar transport particle B","type":"exact"}],"termid":"GO:0030992"}


id: MONDO:0100506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive, multisystem condition caused by pathogenic variants of the ERCC6 gene, encoding the DNA excision repair protein, ERCC-6. Cockayne spectrum with or without cerebrooculofacioskeletal syndrome is characterized by growth failure at birth, with little or no postnatal neurologic development in addition to congenital cataracts or other structural anomalies of the eye, early postnatal contractures of the spine (kyphosis, scoliosis) and joints, and death usually occurring by age five years. This term lumps Cockayne syndrome type 2/B (CSB), cerebrooculofacioskeletal syndrome 1 (COFS syndrome), and De Sanctis-Cacchione syndrome into a spectrum of disease.","definition_xrefs":["PMID:9443879","PMID:10196384","PMID:18628313","PMID:19894250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cockayne syndrome","termid":"MONDO:0016006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0019303","MONDO:0021190"],"is_obsolete":false,"name":"Cockayne spectrum with or without cerebrooculofacioskeletal syndrome","termid":"MONDO:0100506","xrefs":{"Monarch":{"xref_id":"0100506"}}}


id: PBO:0036436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface adhesion protein for conjugation Map4","termid":"PBO:0036436"}


id: PBO:0066128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 7","termid":"PBO:0066128"}


id: PBO:0081039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 15","termid":"PBO:0081039"}


id: MONDO:1012140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia, non-human animal","termid":"MONDO:1011925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia, pig","secondary_identifiers":["OMIA:000573-9823"],"termid":"MONDO:1012140","xrefs":{"Monarch":{"xref_id":"1012140"}}}


id: PBO:0025435
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pompe disease","termid":"PBO:0025435"}


id: PBO:0029492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_meiosis_II","termid":"PBO:0029492"}


id: MONDO:0032757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 41","secondary_identifiers":["GARD:16353","UMLS:C5193103","DOID:0111858","MEDGEN:1680404","OMIM:618449"],"synonyms":[{"name":"CILD41","type":"related"},{"name":"CILIARY DYSKINESIA, PRIMARY, 41","type":"related"}],"termid":"MONDO:0032757","xrefs":{"Monarch":{"xref_id":"0032757"}}}


id: MONDO:0100059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Long-lasting, unexplained and asymptomatic blood hypereosinophilia.","definition_xrefs":["PMID:24338273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"hypereosinophilia of undetermined significance","secondary_identifiers":["MEDGEN:1812275","UMLS:C5666804"],"synonyms":[{"name":"HEUS","type":"exact"},{"name":"benign eosinophilia","type":"exact"}],"termid":"MONDO:0100059","xrefs":{"Monarch":{"xref_id":"0100059"}}}


id: FYPO:0005478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to arsenite ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during cellular response to arsenic-containing substance","termid":"FYPO:0003477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to arsenite ion","synonyms":[{"name":"abolished protein phosphorylation during cellular response to arsenite","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to arsenite ion during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to arsenite ion during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to arsenite ion","type":"exact"}],"termid":"FYPO:0005478"}


id: MONDO:0004060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelioid sarcoma involving the extremities. It usually presents as nodular masses in the dermis and subcutaneous tissues or in the tendons and fascia. It frequently recurs and metastasizes to other anatomic sites. The most common sites of metastasis are the lungs, lymph nodes, bones, and brain.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelioid sarcoma","termid":"MONDO:0017387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peripheral epithelioid sarcoma","secondary_identifiers":["DOID:6988","UMLS:C1333306","NCIT:C27473","MEDGEN:232131"],"synonyms":[{"name":"conventional epithelioid sarcoma","type":"exact"},{"name":"distal-type epithelioid sarcoma","type":"exact"}],"termid":"MONDO:0004060","xrefs":{"Monarch":{"xref_id":"0004060"}}}


id: MONDO:0001983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal degeneration","termid":"MONDO:0001515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"peripheral degeneration of cornea","secondary_identifiers":["DOID:14507","ICD9:371.48","MEDGEN:509800","SCTID:89182000","UMLS:C0155123"],"synonyms":[{"name":"peripheral degenerations of cornea","type":"exact"}],"termid":"MONDO:0001983","xrefs":{"Monarch":{"xref_id":"0001983"}}}


id: GO:0000800
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteinaceous core found between sister chromatids during meiotic prophase.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synaptonemal complex","termid":"GO:0000795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"lateral element","synonyms":[{"name":"axial element","type":"exact"}],"termid":"GO:0000800"}


id: PBO:0064936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase domain and WD repeat containing 1","termid":"PBO:0064936"}


id: MONDO:0003799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the conjunctiva of the eye.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival disorder","termid":"MONDO:0006170"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctivitis","secondary_identifiers":["EFO:0009450","ICD9:372.30","ICD9:372.39","DOID:6195","MEDGEN:1093","icd11.foundation:831696556","MESH:D003231","NCIT:C34504","SCTID:9826008","UMLS:C0009763","HP:0000509"],"synonyms":[{"name":"Madras eye","type":"related"},{"name":"conjunctiva inflammation","type":"exact"},{"name":"conjunctivitis","type":"exact"},{"name":"conjunctivitis (disease)","type":"exact"},{"name":"inflammation of conjunctiva","type":"exact"},{"name":"pink eye","type":"exact"}],"termid":"MONDO:0003799","xrefs":{"Monarch":{"xref_id":"0003799"}}}


id: GO:0106427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the kainate selective glutamate receptor signaling pathway.","definition_xrefs":["PMID:12597860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of kainate selective glutamate receptor signaling pathway","termid":"GO:0106426"},{"relation_name":"negatively_regulates","term_name":"regulation of kainate selective glutamate receptor signaling pathway","termid":"GO:0106426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of kainate selective glutamate receptor signaling pathway","termid":"GO:0106427"}


id: GO:1990465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction a long-chain aldehyde + O2 + 2 NADPH = an alkane + formate + H2O + 2 NADP+.","definition_xrefs":["PMID:22947199","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aldehyde oxygenase (deformylating) activity (obsolete GO:1990465)","termid":"GO:1990465"}


id: PBO:0028933
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_orotidine_level","termid":"PBO:0028933"}


id: MOD:00920
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-valine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-valine residue","synonyms":[{"name":"ModVal","type":"exact"}],"termid":"MOD:00920"}


id: PBO:0052838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 2-3","termid":"PBO:0052838"}


id: GO:0140485
data:
  {"annotated_genes":["SJAG_00699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112253],"is_not":false,"summary":null,"term":"GO:0140485"}]},"cv_name":"molecular_function","definition":"Enables the transfer of 5-aminolevulinic acid from one side of a membrane to the other.","definition_xrefs":["PMID:31989647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"5-aminolevulinic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140485","terms_by_termid":{"GO:0140485":null}}


id: PBO:0050902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha inducible protein 27 like 2","termid":"PBO:0050902"}


id: FYPO:0005412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of meiosis","termid":"FYPO:0000477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"delayed onset of meiosis II","synonyms":[{"name":"delayed meiosis II","type":"exact"},{"name":"delayed onset of second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005412"}


id: PR:O94447
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slm1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal signaling protein slm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.13c","synonyms":[{"name":"Spom972h-slm1","type":"exact"}],"termid":"PR:O94447"}


id: PBO:0070143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 57 pseudogene","termid":"PBO:0070143"}


id: GO:0060116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that alters the size or shape of a vestibular receptor cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"},{"relation_name":"part_of","term_name":"inner ear morphogenesis","termid":"GO:0042472"},{"relation_name":"part_of","term_name":"vestibular receptor cell development","termid":"GO:0060118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular receptor cell morphogenesis","synonyms":[{"name":"vestibular hair cell morphogenesis","type":"exact"}],"termid":"GO:0060116"}


id: PBO:0054604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2009","termid":"PBO:0054604"}


id: MONDO:0013535
data:
  {"annotated_genes":["SJAG_01596"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86283],"is_not":false,"summary":null,"term":"MONDO:0013535"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01596":null},"genotype_count":0,"is_obsolete":false,"name":"hydroxyacyl glutathione hydrolase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614033","UMLS:C3279657","MEDGEN:481287","MESH:C564215"],"synonyms":[{"name":"glyoxalase 2 deficiency","type":"related"},{"name":"glyoxalase II deficiency","type":"exact"},{"name":"hydroxyacyl glutathione hydrolase deficiency","type":"exact"}],"termid":"MONDO:0013535","terms_by_termid":{"MONDO:0013535":null},"xrefs":{"Monarch":{"xref_id":"0013535"}}}


id: GO:0018631
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-phenylacetate + O2 + reduced [NADPH--hemoprotein reductase] = (2-hydroxyphenyl)acetate + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:53392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"phenylacetate 2-hydroxylase activity","secondary_identifiers":["EC:1.14.14.54","UM-BBD_reactionID:r0036"],"synonyms":[{"name":"phenylacetate hydroxylase activity","type":"exact"}],"termid":"GO:0018631"}


id: PBO:0079501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXNL4A pseudogene 1","termid":"PBO:0079501"}


id: PBO:0052137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 4","termid":"PBO:0052137"}


id: MONDO:0013075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalopathy, acute, infection-induced","termid":"MONDO:0000166"},{"relation_name":"excluded_subClassOf","term_name":"herpes simplex encephalitis","termid":"MONDO:0012521"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herpes simplex encephalitis, susceptibility to, 2","synonyms":[{"name":"Herpes simplex encephalitis, susceptibility to, type 2","type":"exact"},{"name":"IIAE2","type":"related"},{"name":"encephalopathy, acute, infection-induced (HERPES-specific), susceptibility to, 2","type":"related"},{"name":"encephalopathy, acute, infection-induced (Herpes-specific), susceptibility to, 2","type":"related"},{"name":"encephalopathy, acute, infection-induced, susceptibility to, 2","type":"related"},{"name":"herpes simplex encephalitis, susceptibility to, 2","type":"exact"}],"termid":"MONDO:0013075","xrefs":{"Monarch":{"xref_id":"0013075"}}}


id: GO:0051930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the sensory perception of pain, the series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"sensory perception of pain","termid":"GO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory perception of pain","termid":"GO:0051930"}


id: PBO:0072989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenocysteine lyase","termid":"PBO:0072989"}


id: GO:0050897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cobalt ion (Co2+).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0046872","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cobalt ion binding","synonyms":[{"name":"Co ion binding","type":"exact"},{"name":"cobalt binding","type":"exact"}],"termid":"GO:0050897"}


id: PBO:0079625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 N like (gene/pseudogene)","termid":"PBO:0079625"}


id: MONDO:0006873
data:
  {"annotated_genes":["SJAG_04459","SJAG_05230","SJAG_04425","SJAG_01199","SJAG_01881","SJAG_03069","SJAG_04042"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015005"},{"annotations":[86611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[85582,85583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[86191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[87011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[85832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012407"}]},"cv_name":"mondo","definition":"A condition produced by dietary or metabolic deficiency. The term includes all diseases caused by an insufficient supply of essential nutrients, i.e., protein (or amino acids), vitamins, and minerals. It also includes an inadequacy of calories. (From Dorland, 27th ed; Stedman, 25th ed)","definition_xrefs":["MESH:D003677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nutritional disorder","termid":"MONDO:0005137"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01199":null,"SJAG_01881":null,"SJAG_03069":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_05230":null},"genotype_count":0,"is_obsolete":false,"name":"nutritional deficiency disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:1001067","ICD10CM:E40-E46","MedDRA:10046058","NCIT:C3669","ICD9:269.9","SCTID:363246002","SCTID:70241007","DOID:5113","MEDGEN:1677627","UMLS:C4761312","ICD9:269.8"],"synonyms":[{"name":"malnourished","type":"exact"},{"name":"malnutrition","type":"exact"}],"termid":"MONDO:0006873","terms_by_termid":{"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0009666":null,"MONDO:0010184":null,"MONDO:0012407":null,"MONDO:0015005":null},"xrefs":{"Monarch":{"xref_id":"0006873"}}}


id: GO:0018203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-isoleucine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-isoleucine modification","termid":"GO:0018203"}


id: PBO:0070270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 4","termid":"PBO:0070270"}


id: _global:exemplar_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is exemplar of Y if X is the best evidence for Y.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exemplar_of","termid":"_global:exemplar_of"}


id: MONDO:1011511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glaucoma that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma, non-human animal","termid":"MONDO:1011457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, domestic cat","secondary_identifiers":["OMIA:000411-9685"],"termid":"MONDO:1011511","xrefs":{"Monarch":{"xref_id":"1011511"}}}


id: MONDO:0015881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A tumor involving the gastroesophageal tissue.","definition_xrefs":["MONDO:patterns/neoplasm"],"gene_count":0,"genotype_count":0,"name":"obsolete gastroesophageal tumor (obsolete MONDO:0015881)","secondary_identifiers":["Orphanet:180821"],"synonyms":[{"name":"rare gastroesophageal tumor","type":"exact"}],"termid":"MONDO:0015881","xrefs":{"Monarch":{"xref_id":"0015881"}}}


id: PBO:0109632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neutrophil cytosolic factor 1C (pseudogene)","termid":"PBO:0109632"}


id: GO:1901612
data:
  {"annotated_genes":["SJAG_03563","SJAG_00368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106571,106957],"is_not":false,"summary":null,"term":"GO:1901612"}]},"cv_name":"molecular_function","definition":"Binding to cardiolipin.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylglycerol binding","termid":"GO:1901611"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_03563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"cardiolipin binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901612","terms_by_termid":{"GO:1901612":null}}


id: MONDO:0015880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic diaphragmatic or thoracic malformation (obsolete MONDO:0015880)","secondary_identifiers":["Orphanet:180779"],"termid":"MONDO:0015880","xrefs":{"Monarch":{"xref_id":"0015880"}}}


id: MONDO:0009988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinoschisis","termid":"MONDO:0004579"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinoschisis of fovea","secondary_identifiers":["MESH:C538369","UMLS:C1849397","OMIM:268080","MEDGEN:340313","GARD:9143"],"synonyms":[{"name":"familial foveal retinoschisis","type":"related"},{"name":"foveal retinoschisis","type":"related"},{"name":"retinoschisis of fovea","type":"exact"}],"termid":"MONDO:0009988","xrefs":{"Monarch":{"xref_id":"0009988"}}}


id: GO:0090664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or a multicellular organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a higher than normal number of multicellular organisms living per unit area.","definition_xrefs":["PMID:26439857","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to high population density","synonyms":[{"name":"response to crowding","type":"exact"}],"termid":"GO:0090664"}


id: PATO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000139 relative orientation (obsolete PATO:0000139)","termid":"PATO:0000139"}


id: PBO:0069632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 909, pseudogene","termid":"PBO:0069632"}


id: MONDO:0010674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease leading to a massive accumulation of glycosaminoglycans and a wide variety of symptoms including distinctive coarse facial features, short stature, cardio-respiratory involvement and skeletal abnormalities. It manifests as a continuum varying from a severe to an attenuated form without neuronal involvement.","definition_xrefs":["Orphanet:580"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic neurometabolic disease with X-linked intellectual disability (obsolete MONDO:0015920)","termid":"MONDO:0015920"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lysosomal disease with hypertrophic cardiomyopathy (obsolete MONDO:0016326)","termid":"MONDO:0016326"},{"relation_name":"excluded_subClassOf","term_name":"obsolete metabolic disease with skin involvement (obsolete MONDO:0019301)","termid":"MONDO:0019301"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lysosomal storage disease with skeletal involvement (obsolete MONDO:0019706)","termid":"MONDO:0019706"},{"relation_name":"excluded_subClassOf","term_name":"obsolete eyelids malposition disorder (obsolete MONDO:0020158)","termid":"MONDO:0020158"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"mucopolysaccharidosis","termid":"MONDO:0019249"},{"relation_name":"is_a","term_name":"lysosomal storage disease with skeletal involvement","termid":"MONDO:0800088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"mucopolysaccharidosis type 2","secondary_identifiers":["SCTID:70737009","UMLS:C0026705","GARD:6675","NANDO:1200097","ICD10CM:E76.1","icd11.foundation:1056274204","MedDRA:10056889","NCIT:C61260","MESH:D016532","OMIM:309900","Orphanet:79388","NANDO:2200548","MEDGEN:7734","DOID:12799"],"synonyms":[{"name":"Hunter syndrome","type":"exact"},{"name":"Hunter's syndrome","type":"exact"},{"name":"I2S deficiency","type":"exact"},{"name":"IDS deficiency","type":"exact"},{"name":"MPS 2","type":"exact"},{"name":"MPS II","type":"exact"},{"name":"MPS II - Hunter syndrome","type":"exact"},{"name":"MPS with skin involvement","type":"exact"},{"name":"MPS2","type":"exact"},{"name":"MPSII","type":"exact"},{"name":"Mucopolysaccharidosis Type II","type":"exact"},{"name":"SIDS deficiency","type":"exact"},{"name":"attenuated MPS (subtype; formerly known as mild MPS II)","type":"exact"},{"name":"deficiency of iduronate-2-sulphatase","type":"exact"},{"name":"iduronate 2-sulfatase deficiency","type":"exact"},{"name":"mucopolysaccharidosis II","type":"exact"},{"name":"mucopolysaccharidosis II, X-linked recessive","type":"exact"},{"name":"mucopolysaccharidosis type 2","type":"exact"},{"name":"mucopolysaccharidosis type II","type":"exact"},{"name":"mucopolysaccharidosis with skin involvement","type":"exact"},{"name":"mucopolysaccharidosis, MPS-II","type":"exact"},{"name":"mucopolysaccharidosis, type 2","type":"exact"},{"name":"mucopolysaccharidosis, type II","type":"exact"},{"name":"severe MPS II","type":"exact"},{"name":"sulfoiduronate sulfatase deficiency","type":"exact"}],"termid":"MONDO:0010674","xrefs":{"Monarch":{"xref_id":"0010674"}}}


id: PBO:0029796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_actin_cable_retrograde_transport","termid":"PBO:0029796"}


id: PBO:0086405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ferric reductase with similarity to Fre2p; expression induced by low iron levels; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086405"}


id: PBO:0062108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 6","termid":"PBO:0062108"}


id: GO:0009826
data:
  {"annotated_genes":["SJAG_00244","SJAG_00514","SJAG_03581","SJAG_02392","SJAG_04509","SJAG_01017","SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90189,96178,94911],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[88209,94348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042815"},{"annotations":[91051],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[115435],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size in one [spatial] dimension or along one axis, resulting in the morphogenesis of the cell.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_01017":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"unidimensional cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell elongation","type":"narrow"},{"name":"cell growth along one axis","type":"exact"},{"name":"cell growth in one dimension","type":"exact"},{"name":"cell morphogenesis by unidimensional growth","type":"exact"},{"name":"polar cell growth","type":"exact"},{"name":"polarized cell growth","type":"exact"}],"termid":"GO:0009826","terms_by_termid":{"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: PBO:0053337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 200","termid":"PBO:0053337"}


id: MONDO:0015975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"}],"gene_count":0,"genotype_count":0,"name":"obsolete hyper-IgM syndrome with susceptibility to opportunistic infections (obsolete MONDO:0015975)","secondary_identifiers":["Orphanet:183663"],"synonyms":[{"name":"HIGM with susceptibility to opportunistic infections","type":"exact"}],"termid":"MONDO:0015975","xrefs":{"Monarch":{"xref_id":"0015975"}}}


id: PR:Q9HDU4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dTDP-D-glucose 4,6-dehydratase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04142","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB2B2.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.11","secondary_identifiers":["UniProtKB:Q9HDU4"],"synonyms":[{"name":"Spom972h-TGDS","type":"exact"}],"termid":"PR:Q9HDU4"}


id: PBO:0040334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 2","termid":"PBO:0040334"}


id: PBO:0036328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eRF1 methyltransferase Mtq2 (predicted)","termid":"PBO:0036328"}


id: GO:0003307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell, resulting a change in cell state that contributes to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"regulates","term_name":"Wnt signaling pathway involved in heart development","termid":"GO:0003306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Wnt signaling pathway involved in heart development","synonyms":[{"name":"regulation of Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway involved in heart development","type":"exact"}],"termid":"GO:0003307"}


id: PBO:0063657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 2","termid":"PBO:0063657"}


id: PBO:0045644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 2","termid":"PBO:0045644"}


id: PBO:0081047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 3","termid":"PBO:0081047"}


id: MONDO:0016705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Angiocentric glioma (AG) is an extremely rare slow-growing glial neoplasm of the central nervous system, usually arising in a superficial location in the cerebrum, affecting all ages and both sexes, and characterized by intractable seizures and headaches, with most cases being cured by surgical incision alone and therefore having a good prognosis.","definition_xrefs":["Orphanet:251671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"low grade glioma","termid":"MONDO:0021637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiocentric glioma","secondary_identifiers":["ONCOTREE:ANGL","ICDO:9431/1","MEDGEN:453267","NCIT:C92552","UMLS:C2363903","GARD:20714","DOID:0081261"],"synonyms":[{"name":"ANGL","type":"related"},{"name":"Monomorphus angiocentric glioma","type":"exact"},{"name":"angiocentric glioma (WHO grade I)","type":"exact"},{"name":"angiocentric neuroepithelial tumor","type":"exact"},{"name":"angiocentric neuroepithelial tumour","type":"exact"}],"termid":"MONDO:0016705","xrefs":{"Monarch":{"xref_id":"0016705"}}}


id: PATO:0000980
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000980 absolute porosity value (obsolete PATO:0000980)","termid":"PATO:0000980"}


id: GO:0010367
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex whose composition varies amongst species; in rice it probably exists in a homo-tetramer to homo-hexamer form and in Gram negative bacteria as a dimer. Functions in the hydrolysis of alpha-(1,6)-D-glucosidic branch linkages. Isoamylases in animals are localized in the extracellular space.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoamylase complex","termid":"GO:0043033"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"extracellular isoamylase complex","termid":"GO:0010367"}


id: SO:0001039
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An MGE that is integrated into the host chromosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobile_genetic_element","termid":"SO:0001037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrated_mobile_genetic_element","synonyms":[{"name":"integrated mobile genetic element","type":"exact"}],"termid":"SO:0001039"}


id: GO:0036517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a serotonergic neuron growth cone is directed to a specific target site in response to an attractive chemical signal.","definition_xrefs":["GOC:bf","GOC:PARL","CL:0000850","PMID:21106844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemoattraction of axon","termid":"GO:0061642"},{"relation_name":"part_of","term_name":"serotonergic neuron axon guidance","termid":"GO:0036515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of serotonergic neuron axon","synonyms":[{"name":"chemoattraction of 5-HT axon","type":"exact"},{"name":"chemoattraction of serotonergic axon","type":"exact"}],"termid":"GO:0036517"}


id: PBO:0064174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group X","termid":"PBO:0064174"}


id: MONDO:0011912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the MYO6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 37","secondary_identifiers":["DOID:0110495","MEDGEN:375076","OMIM:607821","GARD:22605","MESH:C564331","UMLS:C1843028"],"synonyms":[{"name":"DFNB37","type":"narrow"},{"name":"MYO6 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 37","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 37","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in MYO6","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 37","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 37","type":"exact"},{"name":"deafness, autosomal recessive 37","type":"narrow"},{"name":"deafness, autosomal recessive type 37","type":"narrow"}],"termid":"MONDO:0011912","xrefs":{"Monarch":{"xref_id":"0011912"}}}


id: GO:2000675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of type B pancreatic cell apoptotic process.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"is_a","term_name":"regulation of type B pancreatic cell apoptotic process","termid":"GO:2000674"},{"relation_name":"negatively_regulates","term_name":"type B pancreatic cell apoptotic process","termid":"GO:0097050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type B pancreatic cell apoptotic process","synonyms":[{"name":"negative regulation of pancreatic B cell apoptosis","type":"exact"},{"name":"negative regulation of pancreatic beta cell apoptosis","type":"exact"},{"name":"negative regulation of type B pancreatic cell apoptosis","type":"narrow"}],"termid":"GO:2000675"}


id: FYPO:0005114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endosome(s) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to endosome","synonyms":[{"name":"normal protein localisation to endosome","type":"exact"},{"name":"normal protein localization to endosome during mitotic cell cycle","type":"related"},{"name":"normal protein localization to endosome during vegetative growth","type":"exact"},{"name":"normal protein targeting to endosome","type":"related"}],"termid":"FYPO:0005114"}


id: PBO:0041921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 4","termid":"PBO:0041921"}


id: PBO:0046991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 88 member B","termid":"PBO:0046991"}


id: PBO:0059444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A15","termid":"PBO:0059444"}


id: PBO:0045443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-30 histone methyltransferase complex regulatory subunit","termid":"PBO:0045443"}


id: PBO:0077515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 231","termid":"PBO:0077515"}


id: MONDO:0044226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete defective interfering particle induction, control of (obsolete MONDO:0044226)","secondary_identifiers":["HGNC:12678"],"synonyms":[{"name":"Dipi, control of","type":"related"},{"name":"defective interfering particle induction, control OF","type":"related"},{"name":"homologous viral interference","type":"related"},{"name":"vesicular stomatitis Virus defective interfering particle repressor","type":"related"}],"termid":"MONDO:0044226","xrefs":{"Monarch":{"xref_id":"0044226"}}}


id: PBO:0041552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 18","termid":"PBO:0041552"}


id: GO:0098991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by glutamate binding to an kainate-selective glutamate receptor on the surface of the target cell, followed by the movement of ions through a channel in the receptor complex, ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","ISBN:9780071120005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic glutamate receptor signaling pathway","termid":"GO:0035235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"kainate selective glutamate receptor signaling pathway","termid":"GO:0098991"}


id: PR:O74835
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein RRP5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23270:SF0","PRO:DNx","OMA:SCHPO04382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA biogenesis protein rrp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.07","secondary_identifiers":["UniProtKB:O74835"],"synonyms":[{"name":"Spom972h-PDCD11","type":"exact"},{"name":"U3 small nucleolar RNA-associated protein rrp5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein rrp5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ribosomal RNA-processing protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74835"}


id: MONDO:1012388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"unilateral subcortical heterotopia, non-human animal","termid":"MONDO:1011876"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unilateral subcortical heterotopia, California sea lion","secondary_identifiers":["OMIA:001463-9704"],"termid":"MONDO:1012388","xrefs":{"Monarch":{"xref_id":"1012388"}}}


id: MONDO:0011419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camera-Marugo-Cohen syndrome","secondary_identifiers":["MESH:C537964","OMIM:604257","UMLS:C1858661","MEDGEN:347689"],"synonyms":[{"name":"camera Marugo Cohen syndrome","type":"related"},{"name":"camera-Marugo-Cohen syndrome","type":"exact"},{"name":"obesity, intellectual disability, body asymmetry, and muscle weakness","type":"related"},{"name":"obesity, mental retardation, body asymmetry, and muscle weakness","type":"related"}],"termid":"MONDO:0011419","xrefs":{"Monarch":{"xref_id":"0011419"}}}


id: MONDO:0000468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an electrocardiographic finding of complete failure of atrial electrical impulse conduction to the ventricles. This is manifested on the ECG by disassociation of atrial and ventricular rhythms. The atrial rate must be faster than the ventricular rate. (CDISC)","definition_xrefs":["NCIT:C50501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular block","termid":"MONDO:0000465"},{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"third-degree atrioventricular block","secondary_identifiers":["SCTID:27885002","DOID:0050823","UMLS:C0151517","MEDGEN:56230","NANDO:2200214","ICD9:426.0"],"synonyms":[{"name":"AV block third degree","type":"exact"},{"name":"atrioventricular block complete","type":"exact"},{"name":"atrioventricular block, third degree","type":"exact"},{"name":"complete AV block","type":"exact"},{"name":"complete atrioventricular block","type":"exact"},{"name":"complete heart block","type":"exact"},{"name":"non-congenital complete atrioventricular block","type":"exact"},{"name":"third degree AV block","type":"exact"},{"name":"third degree atrioventricular block","type":"exact"}],"termid":"MONDO:0000468","xrefs":{"Monarch":{"xref_id":"0000468"}}}


id: FYPO:0001923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein dephosphorylation is normal (i.e. indistinguishable from wild type) during the G2/M phase transition of the mitotic cell cycle. Protein dephosphorylation is the removal of a phosphate group from a protein amino acid.","definition_xrefs":["GO:0006470","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein dephosphorylation during vegetative growth","termid":"FYPO:0001922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein dephosphorylation during mitotic G2/M transition","synonyms":[{"name":"normal protein dephosphorylation during G2/M phase transition","type":"exact"},{"name":"normal protein dephosphorylation during G2/M transition during vegetative growth","type":"exact"},{"name":"normal protein dephosphorylation during G2/M transition of mitotic cell cycle","type":"exact"},{"name":"normal protein/peptide dephosphorylation during mitotic G2/M transition","type":"exact"}],"termid":"FYPO:0001923"}


id: MONDO:1011458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glaucoma, primary closed-angle that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma, non-human animal","termid":"MONDO:1011457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, primary closed-angle, non-human animal","secondary_identifiers":["OMIA:001871"],"termid":"MONDO:1011458","xrefs":{"Monarch":{"xref_id":"1011458"}}}


id: PBO:0000122
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiotic Expression Upregulated","termid":"PBO:0000122"}


id: MONDO:0014016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the TECPR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 49","secondary_identifiers":["DOID:0110801","Orphanet:320385","OMIM:615031","GARD:13568","UMLS:C3542549","MEDGEN:762260"],"synonyms":[{"name":"SPG49","type":"exact"},{"name":"TECPR2 hereditary spastic paraplegia","type":"exact"},{"name":"autosomal recessive spastic paraplegia 49","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 49","type":"exact"},{"name":"hereditary spastic paraplegia 49","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in TECPR2","type":"exact"},{"name":"hereditary spastic paraplegia type 49","type":"exact"},{"name":"neuropathy, hereditary sensory and autonomic, type IX, with developmental delay","type":"exact"},{"name":"spastic paraplegia 49, autosomal recessive","type":"related"}],"termid":"MONDO:0014016","xrefs":{"Monarch":{"xref_id":"0014016"}}}


id: GO:0010820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of T cell chemotaxis. T cell chemotaxis is the directed movement of a T cell in response to an external stimulus.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell chemotaxis","termid":"GO:0010819"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte chemotaxis","termid":"GO:0140131"},{"relation_name":"is_a","term_name":"positive regulation of T cell migration","termid":"GO:2000406"},{"relation_name":"positively_regulates","term_name":"T cell chemotaxis","termid":"GO:0010818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell chemotaxis","termid":"GO:0010820"}


id: GO:0047734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-glycerol + H2O = sn-glycerol 3-phosphate + CMP + 2 H+.","definition_xrefs":["EC:3.6.1.16","RHEA:21692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"CDP-glycerol diphosphatase activity","secondary_identifiers":["MetaCyc:CDP-GLYCEROL-PYROPHOSPHATASE-RXN","KEGG_REACTION:R00855"],"synonyms":[{"name":"CDP-glycerol phosphoglycerohydrolase activity","type":"related"},{"name":"CDP-glycerol pyrophosphatase activity","type":"exact"},{"name":"CDPglycerol diphosphatase activity","type":"related"},{"name":"CDPglycerol phosphoglycerohydrolase activity","type":"related"},{"name":"CDPglycerol pyrophosphatase activity","type":"related"},{"name":"cytidine diphosphoglycerol pyrophosphatase activity","type":"related"}],"termid":"GO:0047734"}


id: MONDO:0001151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition of mild to moderate high blood pressure that has no identifiable cause.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"essential hypertension","termid":"MONDO:0001134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign essential hypertension","secondary_identifiers":["DOID:10913","ICD9:401.1","SCTID:1201005","MEDGEN:56371","UMLS:C0155583"],"synonyms":[{"name":"benign essential hypertension","type":"exact"}],"termid":"MONDO:0001151","xrefs":{"Monarch":{"xref_id":"0001151"}}}


id: PBO:0047507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FER1L6 antisense RNA 2","termid":"PBO:0047507"}


id: GO:0019246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L(+)-lactate from other compounds, including pyruvate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate biosynthetic process from pyruvate","termid":"GO:0019244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L(+)-lactate biosynthetic process from pyruvate","secondary_identifiers":["MetaCyc:PWY-5481"],"synonyms":[{"name":"L(+)-lactate anabolism from pyruvate","type":"exact"},{"name":"L(+)-lactate formation from pyruvate","type":"exact"},{"name":"L(+)-lactate synthesis from pyruvate","type":"exact"},{"name":"S-lactate biosynthetic process from pyruvate","type":"exact"}],"termid":"GO:0019246"}


id: PBO:0073016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium channel epithelial 1 subunit gamma","termid":"PBO:0073016"}


id: PBO:0039609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANTXR cell adhesion molecule 2","termid":"PBO:0039609"}


id: PBO:0088320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DDHD family phospholipase","termid":"PBO:0088320"}


id: PBO:0050258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 36","termid":"PBO:0050258"}


id: MONDO:0032728
data:
  {"annotated_genes":["SJAG_01649"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87434],"is_not":false,"summary":null,"term":"MONDO:0032728"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01649":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, axonal, type 2EE","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5193076","DOID:0111559","OMIM:618400","MEDGEN:1677426"],"synonyms":[{"name":"CHARCOT-MARIE-TOOTH DISEASE, AXONAL, TYPE 2EE","type":"related"},{"name":"CMT2EE","type":"related"},{"name":"Charcot-Marie-Tooth Neuropathy, Type 2Ee","type":"related"}],"termid":"MONDO:0032728","terms_by_termid":{"MONDO:0032728":null},"xrefs":{"Monarch":{"xref_id":"0032728"}}}


id: GO:0035396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of chemokine (C-X-C motif) ligand 9.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-X-C motif) ligand 9 production","termid":"GO:0035394"},{"relation_name":"positively_regulates","term_name":"chemokine (C-X-C motif) ligand 9 production","termid":"GO:0035393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-X-C motif) ligand 9 production","synonyms":[{"name":"positive regulation of CXCL9 production","type":"exact"},{"name":"positive regulation of MIG production","type":"exact"}],"termid":"GO:0035396"}


id: GO:0075108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont stops, prevents, or reduces the frequency, rate or extent of the host adenylate cyclase activity, which catalyze the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of host adenylate cyclase activity (obsolete GO:0075108)","synonyms":[{"name":"Negative regulation by symbiont of host 3',5'-cyclic AMP synthetase activity","type":"exact"},{"name":"Negative regulation by symbiont of host ATP diphosphate-lyase (cyclizing ; 3',5'-cyclic-AMP-forming) activity","type":"exact"},{"name":"Negative regulation by symbiont of host ATP diphosphate-lyase (cyclizing) activity","type":"exact"},{"name":"Negative regulation by symbiont of host ATP pyrophosphate-lyase activity","type":"exact"},{"name":"Negative regulation by symbiont of host adenyl cyclase activity","type":"exact"},{"name":"Negative regulation by symbiont of host adenylyl cyclase activity","type":"exact"},{"name":"Negative regulation by symbiont of host adenylylcyclase activity","type":"exact"},{"name":"Negative regulation by symbiont of host cAMP generating peptide activity","type":"related"}],"termid":"GO:0075108"}


id: PR:Q8TFG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB15E9.02c gene.","definition_xrefs":["UniProtKB:Q8TFG8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein PB15E9.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB15E9.02c","synonyms":[{"name":"Spom972h-SPAPB15E9.02c","type":"exact"}],"termid":"PR:Q8TFG8"}


id: MONDO:0017398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3MC syndrome describes a rare developmental disorder, that unifies the overlapping autosomal recessive disorders previously known as Carnevale, Mingarelli, Malpuech and Michels syndromes, characterized by a spectrum of developmental anomalies that include distinctive facial dysmorphism (i.e. hypertelorism, blepharophimosis, blepharoptosis, highly arched eyebrows), cleft lip and/or palate, craniosynostosis, learning disability, radioulnar synostosis and genital and vesicorenal anomalies. Less common features reported include anterior chamber defects, cardiac anomalies (e.g. ventricular septal defect), caudal appendage, umbilical hernia/omphalocele and diastasis recti.","definition_xrefs":["Orphanet:293843"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3MC syndrome","secondary_identifiers":["UMLS:C4303860","GARD:1118","icd11.foundation:1294329406","DOID:0060225","NANDO:2200792","MEDGEN:929529","OMIMPS:257920","SCTID:720756005"],"synonyms":[{"name":"Malpuech-Michels-Mingarelli-Carnevale syndrome","type":"exact"},{"name":"craniofacial-ulnar-renal syndrome","type":"exact"},{"name":"oculopalatoskeletal syndrome","type":"exact"}],"termid":"MONDO:0017398","xrefs":{"Monarch":{"xref_id":"0017398"}}}


id: PR:Q12702
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pab1 gene.","definition_xrefs":["UniProtKB:Q12702","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP2A regulatory subunit B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.07c","synonyms":[{"name":"PR55 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pab1","type":"exact"},{"name":"protein phosphatase 2A 55 kDa regulatory subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q12702"}


id: PATO:0002344
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being characterized by fine, entangled hairs giving the appearance of cobweb.","definition_xrefs":["PATOC:DD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy","termid":"PATO:0000454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachnose","termid":"PATO:0002344"}


id: PBO:0002831
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protease S. Pombe","termid":"PBO:0002831"}


id: GO:0019419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the reduction of sulfate to another sulfur-containing ion or compound such as hydrogen sulfide, adenosine-phosphosulfate (APS) or thiosulfate.","definition_xrefs":["MetaCyc:SULFMETII-PWY"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfate reduction (obsolete GO:0019419)","synonyms":[{"name":"assimilatory sulfate reduction","type":"narrow"},{"name":"assimilatory sulphate reduction","type":"narrow"},{"name":"sulfate reduction, APS pathway","type":"narrow"},{"name":"sulphate reduction","type":"exact"},{"name":"sulphate reduction, APS pathway","type":"narrow"}],"termid":"GO:0019419"}


id: PBO:0068349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 126","termid":"PBO:0068349"}


id: FYPO:0003935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Golgi apparatus is decreased, and the protein is present in the endoplasmic reticulum instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003657"},{"relation_name":"is_a","term_name":"decreased protein localization to Golgi apparatus","termid":"FYPO:0004786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to endoplasmic reticulum","synonyms":[{"name":"decreased protein localisation to Golgi apparatus, with protein mislocalised to endoplasmic reticulum","type":"exact"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to ER","type":"exact"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to endoplasmic reticulum during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to Golgi apparatus, with protein mislocalized to endoplasmic reticulum during vegetative growth","type":"exact"},{"name":"reduced protein localization to Golgi apparatus, with protein mislocalized to endoplasmic reticulum","type":"exact"}],"termid":"FYPO:0003935"}


id: GO:0039573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of complement activation. The activation of complement involves the sequential proteolysis of proteins to generate enzymes with catalytic activities. The biological functions of the complement include opsonization, inflammation, lysis of immune complexes, or enhancement of the humoral immune response. For example, the virus complement control protein (VCP) of vaccinia virus, and the complement control protein of herpesvirus inhibit C3 convertase.","definition_xrefs":["PMID:21191012","PMID:7745740"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host complement activation (obsolete GO:0039573)","synonyms":[{"name":"inhibition of host complement activation by virus","type":"exact"},{"name":"inhibition of host complement cascade by virus","type":"exact"}],"termid":"GO:0039573"}


id: PBO:0052790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 31","termid":"PBO:0052790"}


id: PBO:0000391
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homodimer","termid":"PBO:0000391"}


id: GO:0001584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A G protein-coupled receptor that is structurally/functionally related to the rhodopsin receptor.","definition_xrefs":["GOC:mah","IUPHAR_GPCR:1505","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete rhodopsin-like receptor activity (obsolete GO:0001584)","synonyms":[{"name":"Class A G protein coupled receptor","type":"exact"},{"name":"Class A G-protein coupled receptor","type":"exact"},{"name":"Class A GPCR","type":"exact"},{"name":"class A orphan receptor activity","type":"exact"},{"name":"rhodopsin-like receptor activity","type":"exact"}],"termid":"GO:0001584"}


id: PBO:0062874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase with linear linkage specificity","termid":"PBO:0062874"}


id: FYPO:0002283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, does not occur during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein tyrosine phosphorylation during cellular response to heat (obsolete FYPO:0002283)","synonyms":[{"name":"abolished protein tyrosine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"abolished protein tyrosine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"abolished protein tyrosine phosphorylation during cellular response to heat shock","type":"narrow"},{"name":"protein phosphorylation abolished during cellular response to heat","type":"exact"}],"termid":"FYPO:0002283"}


id: GO:0008257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + protein L-histidine = ADP + protein N(tau)-phospho-L-histidine.","definition_xrefs":["EC:2.7.13.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein histidine kinase activity","termid":"GO:0004673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0004672","GO:0016301","GO:0016740","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"protein histidine tele-kinase activity","secondary_identifiers":["MetaCyc:2.7.13.2-RXN","RHEA:11860"],"synonyms":[{"name":"ATP:protein-L-histidine N-tele-phosphotransferase activity","type":"related"},{"name":"ATP:protein-L-histidine Ntau-phosphotransferase activity","type":"related"},{"name":"protein-histidine tele-kinase activity","type":"exact"}],"termid":"GO:0008257"}


id: GO:0006315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Lateral transfer of a group II intron to a homologous allele that lacks the intron, mediated by a site-specific endonuclease encoded within the mobile intron; group II introns are self-splicing introns with a conserved secondary structure.","definition_xrefs":["GOC:mcc","PMID:10487208","ISBN:0716743663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron homing","termid":"GO:0006314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"homing of group II introns","termid":"GO:0006315"}


id: GO:1903569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to ciliary membrane.","definition_xrefs":["GO_REF:0000058","GOC:cilia","GOC:krc","PMID:22072986","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to cilium","termid":"GO:1903566"},{"relation_name":"is_a","term_name":"regulation of protein localization to ciliary membrane","termid":"GO:1903567"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to cell periphery","termid":"GO:1904377"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to membrane","termid":"GO:1905477"},{"relation_name":"positively_regulates","term_name":"protein localization to ciliary membrane","termid":"GO:1903441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to ciliary membrane","synonyms":[{"name":"activation of protein localisation in ciliary membrane","type":"narrow"},{"name":"activation of protein localisation to ciliary membrane","type":"narrow"},{"name":"activation of protein localization in ciliary membrane","type":"narrow"},{"name":"activation of protein localization to ciliary membrane","type":"narrow"},{"name":"positive regulation of protein localisation in ciliary membrane","type":"exact"},{"name":"positive regulation of protein localisation to ciliary membrane","type":"exact"},{"name":"positive regulation of protein localization in ciliary membrane","type":"exact"},{"name":"up regulation of protein localisation in ciliary membrane","type":"exact"},{"name":"up regulation of protein localisation to ciliary membrane","type":"exact"},{"name":"up regulation of protein localization in ciliary membrane","type":"exact"},{"name":"up regulation of protein localization to ciliary membrane","type":"exact"},{"name":"up-regulation of protein localisation in ciliary membrane","type":"exact"},{"name":"up-regulation of protein localisation to ciliary membrane","type":"exact"},{"name":"up-regulation of protein localization in ciliary membrane","type":"exact"},{"name":"up-regulation of protein localization to ciliary membrane","type":"exact"},{"name":"upregulation of protein localisation in ciliary membrane","type":"exact"},{"name":"upregulation of protein localisation to ciliary membrane","type":"exact"},{"name":"upregulation of protein localization in ciliary membrane","type":"exact"},{"name":"upregulation of protein localization to ciliary membrane","type":"exact"}],"termid":"GO:1903569"}


id: PBO:0041015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family A member 2","termid":"PBO:0041015"}


id: MONDO:0008944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the INPP5E gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 1","secondary_identifiers":["DOID:0110980","UMLS:C4551568","OMIM:213300","MEDGEN:1644883"],"synonyms":[{"name":"CORS1","type":"exact"},{"name":"CPD4","type":"exact"},{"name":"Cerebellooculorenal syndrome 1","type":"related"},{"name":"INPP5E Joubert syndrome","type":"exact"},{"name":"JBTS1","type":"exact"},{"name":"Joubert syndrome","type":"related"},{"name":"Joubert syndrome 1","type":"exact"},{"name":"Joubert syndrome caused by mutation in INPP5E","type":"exact"},{"name":"Joubert syndrome type 1","type":"exact"},{"name":"Joubert-Boltshauser syndrome","type":"related"},{"name":"cerebellooculorenal syndrome 1","type":"exact"},{"name":"cerebelloparenchymal disorder 4","type":"related"}],"termid":"MONDO:0008944","xrefs":{"Monarch":{"xref_id":"0008944"}}}


id: PBO:0027038
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding_at_centromere_central_core","termid":"PBO:0027038"}


id: PBO:0040016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 5","termid":"PBO:0040016"}


id: MONDO:0015258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete botulism (obsolete MONDO:0015258)","termid":"MONDO:0015258","xrefs":{"Monarch":{"xref_id":"0015258"}}}


id: FYPO:0006599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to centromere during vegetative growth","termid":"FYPO:0000450"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0005306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to centromeric chromatin during vegetative growth","synonyms":[{"name":"decreased protein localisation to centromeric chromatin during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to centromeric chromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006599"}


id: PBO:0038799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 5 (pseudogene)","termid":"PBO:0038799"}


id: PBO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence error in genomic data","termid":"PBO:0000129"}


id: GO:0000026
data:
  {"annotated_genes":["SJAG_00747","SJAG_04906","SJAG_00334","SJAG_01021","SJAG_02519","SJAG_05327","SJAG_00598","SJAG_03878","SJAG_03082","SJAG_01264"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74920,75148,75320,75884,77417,77961,78369,79683],"is_not":false,"summary":null,"term":"GO:0000026"},{"annotations":[62801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052926"},{"annotations":[62800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052918"},{"annotations":[77073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004377"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a mannose residue to an oligosaccharide, forming an alpha-(1->2) linkage.","definition_xrefs":["PMID:10521541","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00334":null,"SJAG_00598":null,"SJAG_00747":null,"SJAG_01021":null,"SJAG_01264":null,"SJAG_02519":null,"SJAG_03082":null,"SJAG_03878":null,"SJAG_04906":null,"SJAG_05327":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-446187","Reactome:R-HSA-4551297","Reactome:R-HSA-446215","Reactome:R-HSA-446216","Reactome:R-HSA-4720478","Reactome:R-HSA-9035514"],"termid":"GO:0000026","terms_by_termid":{"GO:0000026":null,"GO:0004377":null,"GO:0052918":null,"GO:0052926":null}}


id: PBO:0028450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_nitrogen_starvation","termid":"PBO:0028450"}


id: GO:0060369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the Fc receptor mediated stimulatory signaling pathway.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"is_a","term_name":"regulation of Fc receptor mediated stimulatory signaling pathway","termid":"GO:0060368"},{"relation_name":"positively_regulates","term_name":"Fc receptor mediated stimulatory signaling pathway","termid":"GO:0002431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Fc receptor mediated stimulatory signaling pathway","synonyms":[{"name":"positive regulation of Fc receptor mediated stimulatory signalling pathway","type":"exact"}],"termid":"GO:0060369"}


id: PBO:0041530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 95","termid":"PBO:0041530"}


id: PBO:0031319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_rapamycin","termid":"PBO:0031319"}


id: MONDO:0008375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eye emergency condition which may lead to blindness if left untreated. It is characterized by the separation of the inner retina layers from the underlying pigment epithelium. Causes include trauma, advanced diabetes mellitus, high myopia, and choroid tumors. Symptoms include sudden appearance of floaters, sudden light flushes, and blurred vision.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal detachment","secondary_identifiers":["MEDGEN:19759","ICD9:361.89","OMIM:180050","SCTID:42059000","DOID:5327","MESH:D012163","EFO:0005773","ICD9:361.9","OMIM:312530","NCIT:C26874","UMLS:C0035305","ICD9:362.40"],"synonyms":[{"name":"detached retina","type":"exact"},{"name":"retina, detached","type":"exact"},{"name":"retinal detachment","type":"exact"}],"termid":"MONDO:0008375","xrefs":{"Monarch":{"xref_id":"0008375"}}}


id: PR:Q96TL7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rap1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96TL7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein rap1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.02","synonyms":[{"name":"Spom972h-rap1","type":"exact"}],"termid":"PR:Q96TL7"}


id: PBO:0050289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNF1 homeobox B","termid":"PBO:0050289"}


id: MONDO:0008073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare kidney disorder characterized by hyperuricemia, progressive nephropathy, and gout occurring at an early age.","definition_xrefs":["Orphanet:209886"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant medullary cystic kidney disease with or without hyperuricemia","termid":"MONDO:0008264"},{"relation_name":"is_a","term_name":"familial juvenile hyperuricemic nephropathy","termid":"MONDO:0000608"},{"relation_name":"is_a","term_name":"autosomal dominant medullary cystic kidney disease with or without hyperuricemia","termid":"MONDO:0008264"},{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0019254","MONDO:0000426","MONDO:0005066"],"is_obsolete":false,"name":"familial juvenile hyperuricemic nephropathy type 1","secondary_identifiers":["OMIM:162000","OMIM:603860","OMIM:609886","GARD:10679","Orphanet:88950","MESH:C563693","UMLS:C4551496","SCTID:445503007","NCIT:C123172","MEDGEN:1645893"],"synonyms":[{"name":"ADMCKD2","type":"related"},{"name":"ADTKD-UMOD","type":"exact"},{"name":"Autosomal Dominant Tubulo-Interstitial Kidney Disease","type":"exact"},{"name":"FJHN type 1","type":"exact"},{"name":"HNFJ1","type":"exact"},{"name":"MCKD2","type":"related"},{"name":"UMOD familial juvenile hyperuricemic nephropathy","type":"exact"},{"name":"UMOD-associated FJHN","type":"exact"},{"name":"UMOD-associated familial juvenile hyperuricemic nephropathy","type":"exact"},{"name":"UMOD-related ADTKD","type":"exact"},{"name":"UMOD-related autosomal dominant tubulointerstitial kidney disease","type":"related"},{"name":"UMOD-related kidney disease","type":"exact"},{"name":"autosomal dominant medullary cystic kidney disease type 2","type":"exact"},{"name":"autosomal dominant medullary cystic kidney disease with hyperuricemia","type":"exact"},{"name":"autosomal dominant tubulointerstitial kidney disease - UMOD","type":"exact"},{"name":"autosomal dominant tubulointerstitial kidney disease due to mutations in UMOD","type":"exact"},{"name":"familial juvenile gouty nephropathy","type":"broad"},{"name":"familial juvenile hyperuricaemic nephropathy","type":"related"},{"name":"familial juvenile hyperuricemic nephropathy caused by mutation in UMOD","type":"exact"},{"name":"familial nephropathy with gout","type":"broad"},{"name":"glomerulocystic kidney disease with hyperuricemia and isosthenuria","type":"exact"},{"name":"gouty nephropathy, familial juvenile","type":"broad"},{"name":"hyperuricemic nephropathy, familial juvenile","type":"broad"},{"name":"hyperuricemic nephropathy, familial juvenile, 1","type":"exact"},{"name":"hyperuricemic nephropathy, familial juvenile, type 1","type":"exact"},{"name":"medullary cystic kidney disease 2","type":"exact"},{"name":"medullary cystic kidney disease 2, autosomal dominant","type":"related"},{"name":"medullary cystic kidney disease type 2","type":"exact"},{"name":"medullary cystic kidney disease type II","type":"exact"},{"name":"nephropathy, familial, with gout","type":"broad"},{"name":"tubulointerstitial kidney disease, autosomal dominant, 1","type":"exact"},{"name":"uromodulin storage disease","type":"exact"},{"name":"uromodulin-associated kidney disease","type":"exact"}],"termid":"MONDO:0008073","xrefs":{"Monarch":{"xref_id":"0008073"}}}


id: GO:0031569
data:
  {"annotated_genes":["SJAG_02392","SJAG_04332","SJAG_03602","SJAG_04280"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94873,96181,98758,116394],"is_not":false,"summary":null,"term":"GO:0031569"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell size control checkpoint prior to the G2/M transition of mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010972"},{"relation_name":"is_a","term_name":"mitotic cell size control checkpoint signaling","termid":"GO:0031567"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03602":null,"SJAG_04280":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0044772","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"mitotic G2 cell size control checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072453"],"synonyms":[{"name":"G2 cell size control checkpoint","type":"exact"},{"name":"G2/M transition size control checkpoint","type":"exact"},{"name":"mitotic G2 cell size control checkpoint","type":"related"},{"name":"mitotic cell cycle G2/M transition size control checkpoint","type":"exact"},{"name":"signal transduction involved in G2 cell size control checkpoint","type":"related"},{"name":"signal transduction involved in G2/M transition size control checkpoint","type":"related"},{"name":"signal transduction involved in mitotic cell cycle G2/M transition size control checkpoint","type":"related"}],"termid":"GO:0031569","terms_by_termid":{"GO:0031569":null}}


id: GO:0097643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with amylin to initiate a change in cell activity.","definition_xrefs":["PMID:18687416","GOC:bhm","PMID:10871296","PMID:12037140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor activity","termid":"GO:0097642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"amylin receptor activity","termid":"GO:0097643"}


id: MONDO:0020243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete colobomatous and areolar dystrophy (obsolete MONDO:0020243)","secondary_identifiers":["Orphanet:98665"],"termid":"MONDO:0020243","xrefs":{"Monarch":{"xref_id":"0020243"}}}


id: PATO:0000686
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000686 absolute rate value (obsolete PATO:0000686)","termid":"PATO:0000686"}


id: PBO:0072908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCAN domain containing 1","termid":"PBO:0072908"}


id: MONDO:0850127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory myofibroblastic tumor","termid":"MONDO:0015798"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelioid inflammatory myofibroblastic sarcoma","secondary_identifiers":["MEDGEN:1843877","DOID:0080372","UMLS:C5880506"],"termid":"MONDO:0850127","xrefs":{"Monarch":{"xref_id":"0850127"}}}


id: GO:0102264
data:
  {"annotated_genes":["SJAG_03236"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105044],"is_not":false,"summary":null,"term":"GO:0102264"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil20 in tRNA + NAD(P) = H+ + a uracil20 in tRNA + NAD(P)H.","definition_xrefs":["EC:1.3.1.91","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0140101","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"tRNA-dihydrouridine20 synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-12456"],"termid":"GO:0102264","terms_by_termid":{"GO:0102264":null}}


id: GO:1990611
data:
  {"annotated_genes":["SJAG_04873","SJAG_00786","SJAG_03869","SJAG_02072","SJAG_01942","SJAG_02592","SJAG_00690","SJAG_00169","SJAG_04383"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95560,103671,104303],"is_not":false,"summary":null,"term":"GO:1990611"},{"annotations":[70344,75586,116005,94698,110042,99667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"}]},"cv_name":"biological_process","definition":"Modulation of the frequency, rate or extent of cytoplasmic translational initiation as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["PMID:16278445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation","termid":"GO:1904688"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translation in response to stress","termid":"GO:1990497"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02072":null,"SJAG_02592":null,"SJAG_03869":null,"SJAG_04383":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0002181"],"is_obsolete":false,"name":"regulation of cytoplasmic translational initiation in response to stress","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990611","terms_by_termid":{"GO:1990611":null,"GO:1990625":null}}


