# terms

id: MONDO:0020522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, arthrochalasia type","termid":"MONDO:0007525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome type 7B","secondary_identifiers":["UMLS:C1851801","GTR:AN1112503","GTR:AN1112965","GTR:AN1112967","MEDGEN:342092","Orphanet:99876","icd11.foundation:380846833","MESH:C565061","GTR:AN1112966"],"synonyms":[{"name":"EDS VIIB","type":"exact"},{"name":"EDSARTH2","type":"related"},{"name":"Ehlers-Danlos syndrome, arthrochalasia type, 2","type":"related"},{"name":"Ehlers-Danlos syndrome, type VIIB, autosomal dominant","type":"related"}],"termid":"MONDO:0020522","xrefs":{"Monarch":{"xref_id":"0020522"}}}


id: PBO:0062497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily D member 1","termid":"PBO:0062497"}


id: PBO:0058485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5680","termid":"PBO:0058485"}


id: GO:0140077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of lipoprotein transport.","definition_xrefs":["GOC:BHF","PMID:26501192","GOC:RPH","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein transport","termid":"GO:0051222"},{"relation_name":"is_a","term_name":"regulation of lipoprotein transport","termid":"GO:0140075"},{"relation_name":"positively_regulates","term_name":"lipoprotein transport","termid":"GO:0042953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of lipoprotein transport","termid":"GO:0140077"}


id: FYPO:0004443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore membrane is decreased during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"decreased protein localization to prospore membrane","termid":"FYPO:0004442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to prospore membrane during meiosis II","synonyms":[{"name":"decreased protein localisation to prospore membrane during meiosis II","type":"exact"},{"name":"decreased protein localization to forespore membrane during meiosis II","type":"exact"},{"name":"decreased protein localization to prospore membrane during second meiotic nuclear division","type":"exact"},{"name":"reduced protein localization to prospore membrane during meiosis II","type":"exact"}],"termid":"FYPO:0004443"}


id: PBO:0026659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_bleomycin","termid":"PBO:0026659"}


id: FYPO:0006632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more free fatty acids measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:30003614","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular free fatty acid level","synonyms":[{"name":"normal cellular fatty acid level","type":"exact"},{"name":"normal cellular free fatty acid level during mitotic cell cycle","type":"related"},{"name":"normal cellular free fatty acid level during vegetative growth","type":"exact"},{"name":"normal level of free fatty acids in cell","type":"exact"}],"termid":"FYPO:0006632"}


id: PBO:0076687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 4 pseudogene 1","termid":"PBO:0076687"}


id: GO:1904172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bleb assembly.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000058","PMID:25651887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"is_a","term_name":"regulation of bleb assembly","termid":"GO:1904170"},{"relation_name":"positively_regulates","term_name":"bleb assembly","termid":"GO:0032060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of bleb assembly","synonyms":[{"name":"activation of bleb assembly","type":"narrow"},{"name":"activation of cell blebbing","type":"narrow"},{"name":"positive regulation of cell blebbing","type":"exact"},{"name":"up regulation of bleb assembly","type":"exact"},{"name":"up regulation of cell blebbing","type":"exact"},{"name":"up-regulation of bleb assembly","type":"exact"},{"name":"up-regulation of cell blebbing","type":"exact"},{"name":"upregulation of bleb assembly","type":"exact"},{"name":"upregulation of cell blebbing","type":"exact"}],"termid":"GO:1904172"}


id: GO:0019146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinose 5-phosphate = D-ribulose 5-phosphate + 2 H+.","definition_xrefs":["EC:5.3.1.13","RHEA:23104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arabinose-5-phosphate isomerase activity","secondary_identifiers":["KEGG_REACTION:R01530","MetaCyc:DARAB5PISOM-RXN"],"synonyms":[{"name":"D-arabinose-5-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"D-arabinose-5-phosphate ketol-isomerase activity","type":"related"},{"name":"arabinose phosphate isomerase activity","type":"related"},{"name":"phosphoarabinoisomerase activity","type":"related"}],"termid":"GO:0019146"}


id: PBO:0028849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_stability","termid":"PBO:0028849"}


id: GO:0050134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-methyl-L-lysine + H2O + O2 = L-lysine + formaldehyde + H2O2.","definition_xrefs":["RHEA:23200","EC:1.5.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"N6-methyl-lysine oxidase activity","secondary_identifiers":["MetaCyc:N6-METHYL-LYSINE-OXIDASE-RXN","KEGG_REACTION:R00612"],"synonyms":[{"name":"6-N-methyl-L-lysine:oxygen oxidoreductase (demethylating)","type":"related"},{"name":"N(6)-methyllysine oxidase activity","type":"related"},{"name":"N6-methyl-L-lysine:oxygen oxidoreductase (demethylating)","type":"related"},{"name":"N6-methyllysine oxidase activity","type":"related"},{"name":"epsilon-N-methyllysine demethylase activity","type":"related"},{"name":"epsilon-alkyl-L-lysine:oxygen oxidoreductase activity","type":"related"},{"name":"epsilon-alkyllysinase activity","type":"related"}],"termid":"GO:0050134"}


id: GO:0004834
data:
  {"annotated_genes":["SJAG_05007"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73649],"is_not":false,"summary":null,"term":"GO:0004834"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O.","definition_xrefs":["RHEA:10532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"tryptophan synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:4.2.1.20","KEGG_REACTION:R02722","MetaCyc:TRYPSYN-RXN"],"synonyms":[{"name":"L-serine hydro-lyase (adding indoleglycerol-phosphate)","type":"related"},{"name":"L-serine hydro-lyase [adding 1-C-(indol-3-yl)glycerol 3-phosphate; L-tryptophan and glyceraldehyde-3-phosphate-forming]","type":"related"},{"name":"L-tryptophan synthetase activity","type":"related"},{"name":"indoleglycerol phosphate aldolase activity","type":"related"},{"name":"tryptophan desmolase activity","type":"related"},{"name":"tryptophan synthetase activity","type":"related"}],"termid":"GO:0004834","terms_by_termid":{"GO:0004834":null}}


id: GO:0043563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of odorants, any substance capable of stimulating the sense of smell, into, out of or within a cell, or between cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete odorant transporter activity (obsolete GO:0043563)","termid":"GO:0043563"}


id: PBO:0042788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 162","termid":"PBO:0042788"}


id: PBO:0001180
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubp Five interacting potential Transmembrane Protein","termid":"PBO:0001180"}


id: GO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte mediated cytotoxicity.","definition_xrefs":["PMID:11911826","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated immunity","termid":"GO:0002703"},{"relation_name":"is_a","term_name":"regulation of cell killing","termid":"GO:0031341"},{"relation_name":"regulates","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte mediated cytotoxicity","synonyms":[{"name":"regulation of immune cell mediated cell death","type":"exact"},{"name":"regulation of immune cell mediated cell killing","type":"exact"},{"name":"regulation of immune cell mediated cytotoxicity","type":"exact"},{"name":"regulation of leucocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001910"}


id: MONDO:1010600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoparathyroidism that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoparathyroidism, non-human animal","termid":"MONDO:1010056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoparathyroidism, horse","secondary_identifiers":["OMIA:000528-9796"],"termid":"MONDO:1010600","xrefs":{"Monarch":{"xref_id":"1010600"}}}


id: PBO:0030060
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_mitotic_spindle_pole_body","termid":"PBO:0030060"}


id: GO:0099558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that preserves the structural organistation and orientation of a synaptic cellular component such as the synaptic cytoskeleton and molecular scaffolds.","definition_xrefs":["PMID:24449494","GOC:dos","PMID:25611509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction maintenance","termid":"GO:0034331"},{"relation_name":"is_a","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of synapse structure","synonyms":[{"name":"synaptic maintenance","type":"exact"}],"termid":"GO:0099558"}


id: PBO:0074315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 5","termid":"PBO:0074315"}


id: RO:HOM0000006
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homology that is defined by similarity with regard to selected structural parameters.","definition_xrefs":["ISBN:0123195837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_homology_relationship_with","termid":"RO:HOM0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_structural_homology_relationship_with","synonyms":[{"name":"idealistic homology","type":"related"},{"name":"structural homologous to","type":"exact"}],"termid":"RO:HOM0000006"}


id: GO:0047359
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkenyl-2-acylglycerol + CDP-choline = plasmenylcholine + CMP.","definition_xrefs":["MetaCyc:2.7.8.22-RXN","EC:2.7.8.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016780"],"is_obsolete":false,"name":"1-alkenyl-2-acylglycerol choline phosphotransferase activity","secondary_identifiers":["RHEA:36227"],"synonyms":[{"name":"CDP-choline-1-alkenyl-2-acyl-glycerol phosphocholinetransferase activity","type":"related"},{"name":"CDP-choline:1-alkenyl-2-acylglycerol cholinephosphotransferase activity","type":"related"}],"termid":"GO:0047359"}


id: GO:0031687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an A2A adenosine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine receptor binding","termid":"GO:0031685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"A2A adenosine receptor binding","synonyms":[{"name":"A2A adenosine receptor ligand","type":"narrow"}],"termid":"GO:0031687"}


id: FYPO:0007820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of polyphosphate measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah","PMID:34147496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"polyphosphate absent from cell","synonyms":[{"name":"polyphosphate absent from cell during mitotic cell cycle","type":"related"},{"name":"polyphosphate absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0007820"}


id: MONDO:0100033
data:
  {"annotated_genes":["SJAG_01881","SJAG_05230"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015005"},{"annotations":[85832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012407"}]},"cv_name":"mondo","definition":"Metabolic epilepsies are conceptualized as having a distinct metabolic abnormality that has been demonstrated to be associated with a substantially increased risk of developing epilepsy in appropriately designed studies. Metabolic disorders have genetic origin; however, the metabolic abnormalities are a separate disorder interposed between the genetic defect and the epilepsy.","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01881":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"metabolic epilepsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4524099","MEDGEN:1843497"],"termid":"MONDO:0100033","terms_by_termid":{"MONDO:0012407":null,"MONDO:0015005":null},"xrefs":{"Monarch":{"xref_id":"0100033"}}}


id: PBO:0068210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 517","termid":"PBO:0068210"}


id: PBO:0049662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 histone 16","termid":"PBO:0049662"}


id: GO:0038173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-17A binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:jc","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-17A-mediated signaling pathway","synonyms":[{"name":"IL-17A-mediated signaling pathway","type":"exact"},{"name":"IL17A signaling pathway","type":"exact"},{"name":"interleukin-17A signaling pathway","type":"related"},{"name":"interleukin-17A-mediated signalling pathway","type":"exact"}],"termid":"GO:0038173"}


id: GO:0050391
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-valine + H2O + NADP+ = 3-methyl-2-oxobutanoate + NH3 + NADPH.","definition_xrefs":["MetaCyc:VALINE-DEHYDROGENASE-NADP+-RXN","EC:1.4.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"valine dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:11156"],"synonyms":[{"name":"L-valine:NADP+ oxidoreductase (deaminating)","type":"related"},{"name":"valine dehydrogenase (NADP) activity","type":"exact"},{"name":"valine dehydrogenase (nicotinanide adenine dinucleotide phosphate)","type":"related"}],"termid":"GO:0050391"}


id: GO:0016555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a uridine residue to cytosine in an RNA molecule by amination.","definition_xrefs":["PMID:11092837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base conversion or substitution editing","termid":"GO:0016553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uridine to cytidine editing","termid":"GO:0016555"}


id: MONDO:0014724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the TCTN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 24","secondary_identifiers":["GARD:16150","DOID:0110993","MEDGEN:905319","OMIM:616654","UMLS:C4084841"],"synonyms":[{"name":"JBTS24","type":"exact"},{"name":"Joubert syndrome 24","type":"exact"},{"name":"Joubert syndrome caused by mutation in TCTN2","type":"exact"},{"name":"Joubert syndrome type 24","type":"exact"},{"name":"TCTN2 Joubert syndrome","type":"exact"}],"termid":"MONDO:0014724","xrefs":{"Monarch":{"xref_id":"0014724"}}}


id: MONDO:0001270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bladder calculus","termid":"MONDO:0006678"},{"relation_name":"is_a","term_name":"bladder diverticulum","termid":"MONDO:0007197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stone in bladder diverticulum","secondary_identifiers":["MEDGEN:510220","UMLS:C0156265","DOID:11354","ICD9:594.0","SCTID:18109005"],"synonyms":[{"name":"calculus in diverticulum of bladder","type":"exact"}],"termid":"MONDO:0001270","xrefs":{"Monarch":{"xref_id":"0001270"}}}


id: PBO:0083188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene YIL177C","termid":"PBO:0083188"}


id: MONDO:0004150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A breast fibroadenoma characterized by a very large size. This term has also been used as a synonym for juvenile fibroadenoma by some authors. The latter is characterized by epithelial hyperplasia and an increased stromal cellularity.","definition_xrefs":["NCIT:C4273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast fibroadenoma","termid":"MONDO:0002056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast giant fibroadenoma","secondary_identifiers":["SCTID:254846003","ICDO:9016/0","MEDGEN:138039","UMLS:C0346157","DOID:7223","GARD:20206","Orphanet:180267"],"synonyms":[{"name":"breast giant fibroadenoma","type":"exact"},{"name":"giant adenofibroma of the breast","type":"exact"},{"name":"giant breast fibroadenoma","type":"exact"},{"name":"giant fibroadenoma","type":"exact"},{"name":"giant fibroadenoma of breast","type":"exact"},{"name":"giant fibroadenoma of the breast","type":"exact"}],"termid":"MONDO:0004150","xrefs":{"Monarch":{"xref_id":"0004150"}}}


id: PBO:0035697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_upstream_of_or_within","termid":"PBO:0035697"}


id: GO:0000713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During meiosis, the formation of a stable duplex DNA that contains one strand from each of the two recombining DNA molecules.","definition_xrefs":["PMID:9334324","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0007049","GO:0006259"],"is_obsolete":false,"name":"meiotic heteroduplex formation","termid":"GO:0000713"}


id: PBO:0089856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family ATP-dependent chromatin remodeller Ino80","termid":"PBO:0089856"}


id: GO:0007016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cytoskeleton organization process that directly or indirectly links cytoskeletal filaments to the plasma membrane.","definition_xrefs":["ISBN:0198599323"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoskeletal anchoring at plasma membrane (obsolete GO:0007016)","synonyms":[{"name":"cytoskeletal anchoring activity","type":"related"}],"termid":"GO:0007016"}


id: MONDO:0032760
data:
  {"annotated_genes":["SJAG_05282","SJAG_04613"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87473,87474],"is_not":false,"summary":null,"term":"MONDO:0032760"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04613":null,"SJAG_05282":null},"genotype_count":0,"is_obsolete":false,"name":"developmental delay with or without dysmorphic facies and autism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1679263","OMIM:618454","UMLS:C5193106"],"synonyms":[{"name":"DEDDFA","type":"related"},{"name":"DEVELOPMENTAL DELAY WITH OR WITHOUT DYSMORPHIC FACIES AND AUTISM","type":"related"}],"termid":"MONDO:0032760","terms_by_termid":{"MONDO:0032760":null},"xrefs":{"Monarch":{"xref_id":"0032760"}}}


id: PBO:0078052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 42","termid":"PBO:0078052"}


id: PATO:0002452
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer being thinner or more losely packed.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decondensed","termid":"PATO:0002452"}


id: PBO:0048493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 5","termid":"PBO:0048493"}


id: MONDO:0023030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysmorphism cleft palate loose skin","termid":"MONDO:0023030","xrefs":{"Monarch":{"xref_id":"0023030"}}}


id: GO:0051011
data:
  {"annotated_genes":["SJAG_02609","SJAG_03835"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71534,72110],"is_not":false,"summary":null,"term":"GO:0051011"}]},"cv_name":"molecular_function","definition":"Binding to the minus end of a microtubule.","definition_xrefs":["GOC:ai","PMID:14557818","PMID:14614826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule binding","termid":"GO:0008017"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02609":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008017"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515","GO:0008017","GO:0008092"],"is_obsolete":false,"name":"microtubule minus-end binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0051011","terms_by_termid":{"GO:0051011":null}}


id: GO:0085003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the stylet, a hollow protrusible spear-like structure in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance released from stylet (obsolete GO:0085003)","termid":"GO:0085003"}


id: MONDO:0971002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 94","secondary_identifiers":["DOID:0070593","UMLS:C5935627","MEDGEN:1855064","OMIM:620850"],"termid":"MONDO:0971002","xrefs":{"Monarch":{"xref_id":"0971002"}}}


id: PBO:0072458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 22","termid":"PBO:0072458"}


id: PBO:0109317
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromosome Loss when Overexpressed","termid":"PBO:0109317"}


id: PBO:0038964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenomedullin 5 (putative)","termid":"PBO:0038964"}


id: PBO:0061501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of reactive oxygen species","termid":"PBO:0061501"}


id: PBO:0086871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative sterol transfer protein; has a probable role in retrograde transport of sterols from the plasma membrane to the ER; co-localizes to puncta in the cortical ER with Ysp2p; contains GRAM, StART-like (VASt) and two PH-like domains; one of 6 StART-like domain-containing proteins in yeast that may be involved in sterol transfer between intracellular membranes; conserved across eukaryotes; previously identified as a transcription cofactor that interacts with DNA-bound Snf1p","termid":"PBO:0086871"}


id: PBO:0034664
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_mitotic_cohesin_loading","termid":"PBO:0034664"}


id: GO:0048281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of inflorescences are generated and organized. An inflorescence is the part of a seed plant body that is usually above ground and that can bear flowers.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"shoot system morphogenesis","termid":"GO:0010016"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"inflorescence development","termid":"GO:0010229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflorescence morphogenesis","termid":"GO:0048281"}


id: MONDO:0012141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any orofacial cleft in which the cause of the disease is a mutation in the IRF6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 6, susceptibility to","secondary_identifiers":["DOID:0080593","UMLS:C1837213","MEDGEN:332391","OMIM:608864"],"synonyms":[{"name":"IRF6 orofacial cleft","type":"exact"},{"name":"OFC6","type":"related"},{"name":"cleft lip with or without cleft palate, nonsyndromic, 6","type":"related"},{"name":"orofacial cleft 6","type":"exact"},{"name":"orofacial cleft 6, susceptibility to","type":"exact"},{"name":"orofacial cleft caused by mutation in IRF6","type":"exact"},{"name":"susceptibility to orofacial cleft 6","type":"related"}],"termid":"MONDO:0012141","xrefs":{"Monarch":{"xref_id":"0012141"}}}


id: FYPO:0006114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during S phase of the mitotic cell cycle is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased protein level during mitotic S phase","synonyms":[{"name":"increased protein accumulation during mitotic S phase","type":"related"},{"name":"increased protein level during S phase of mitotic cell cycle","type":"related"},{"name":"increased protein level during mitotic S phase during vegetative growth","type":"exact"}],"termid":"FYPO:0006114"}


id: GO:0046647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of gamma-delta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"is_a","term_name":"negative regulation of gamma-delta T cell activation","termid":"GO:0046644"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell proliferation","termid":"GO:0046646"},{"relation_name":"negatively_regulates","term_name":"gamma-delta T cell proliferation","termid":"GO:0046630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gamma-delta T cell proliferation","synonyms":[{"name":"down regulation of gamma-delta T cell proliferation","type":"exact"},{"name":"down-regulation of gamma-delta T cell proliferation","type":"exact"},{"name":"downregulation of gamma-delta T cell proliferation","type":"exact"},{"name":"inhibition of gamma-delta T cell proliferation","type":"narrow"},{"name":"negative regulation of gamma-delta T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of gamma-delta T-cell proliferation","type":"exact"},{"name":"negative regulation of gamma-delta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046647"}


id: GO:1990495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An actin filament organization process that contributes to actomyosin contractile ring assembly during mitotic cytokinesis.","definition_xrefs":["PMID:8834798"],"gene_count":0,"genotype_count":0,"name":"obsolete actin filament organization involved in mitotic cytokinetic actomyosin contractile ring assembly (obsolete GO:1990495)","synonyms":[{"name":"actin filament organization involved in mitotic cytokinetic actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1990495"}


id: GO:0035892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change that affects platelet aggregation in another organism. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:fj","GOC:bf","PMID:15922770"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation of platelet aggregation in another organism (obsolete GO:0035892)","synonyms":[{"name":"modulation by organism of platelet aggregation in other organism","type":"exact"},{"name":"modulation of platelet aggregation in another organism","type":"exact"},{"name":"modulation of platelet aggregation in other organism","type":"exact"},{"name":"regulation of platelet aggregation in other organism","type":"related"}],"termid":"GO:0035892"}


id: PBO:0051524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor accessory protein like 2","termid":"PBO:0051524"}


id: PBO:0036256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic ER membrane protein implicated in cholesterol metabolism in human (predicted)","termid":"PBO:0036256"}


id: GO:0015184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-cystine from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators","ISBN:0198506732","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transmembrane transporter activity","termid":"GO:0000099"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-cystine transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-5340130"],"synonyms":[{"name":"L-cystine transporter activity","type":"broad"},{"name":"cystine/diaminopimelate porter activity","type":"narrow"}],"termid":"GO:0015184"}


id: MONDO:0007809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"keratinopathic ichthyosis","termid":"MONDO:0017266"},{"relation_name":"is_a","term_name":"ichthyosis hystrix","termid":"MONDO:0859383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis histrix, Lambert type","secondary_identifiers":["MESH:C536087","GARD:9497","Orphanet:79504","MEDGEN:98487","UMLS:C0432311","SCTID:254174005","OMIM:146600","ICD9:757.39","ICD10CM:Q80.0"],"synonyms":[{"name":"Lambert type ichthyosis","type":"related"},{"name":"ichthyosis hystrix gravior","type":"exact"},{"name":"ichthyosis, Lambert type","type":"exact"},{"name":"porcupine Man","type":"related"}],"termid":"MONDO:0007809","xrefs":{"Monarch":{"xref_id":"0007809"}}}


id: PBO:0067987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 289","termid":"PBO:0067987"}


id: PBO:0068730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 1","termid":"PBO:0068730"}


id: MONDO:0007104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis-parkinsonism-dementia complex","secondary_identifiers":["Orphanet:90020","UMLS:C0543859","ICD10CM:G12.2","OMIM:105500","DOID:0111246","GARD:9239","MEDGEN:107775"],"synonyms":[{"name":"ALS-pDC","type":"related"},{"name":"Guam disease","type":"exact"},{"name":"Lytico-Bodig disease","type":"exact"},{"name":"Lytigo-Bodig disease","type":"exact"},{"name":"PDALS","type":"exact"},{"name":"Parkinsonism-dementia-ALS complex","type":"exact"},{"name":"amyotrophic lateral sclerosis, Parkinsonism/dementia complex of Guam","type":"related"},{"name":"amyotrophic lateral sclerosis-PARKINSONISM/dementia complex 1","type":"related"},{"name":"amyotrophic lateral sclerosis-Parkinsonism/dementia Complex of Guam","type":"related"},{"name":"amyotrophic lateral sclerosis-Parkinsonism/dementia Complex type 1","type":"exact"},{"name":"amyotrophic lateral sclerosis-parkinsonism-dementia of Guam syndrome","type":"exact"},{"name":"amyotrophic lateral sclerosis-parkinsonism/dementia complex, susceptibility to","type":"related"}],"termid":"MONDO:0007104","xrefs":{"Monarch":{"xref_id":"0007104"}}}


id: GO:0036192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxyindolin-2-one + O2 + reduced [NADPH--hemoprotein reductase] = 2-hydroxy-2H-1,4-benzoxazin-3(4H)-one + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:31927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxyindolin-2-one monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R07422","EC:1.14.14.109"],"synonyms":[{"name":"3-hydroxyindolin-2-one,NAD(P)H:oxygen oxidoreductase (2-hydroxy-2H-1,4-benzoxazin-3(4H)-one-forming)","type":"related"}],"termid":"GO:0036192"}


id: GO:0043021
data:
  {"annotated_genes":["SJAG_01438","SJAG_03094","SJAG_02171","SJAG_04635","SJAG_01517","SJAG_01567","SJAG_01759","SJAG_03841","SJAG_02279","SJAG_04914","SJAG_03629","SJAG_02856","SJAG_03012","SJAG_00188","SJAG_01840","SJAG_02812","SJAG_05332","SJAG_01806","SJAG_04560","SJAG_02061","SJAG_02746","SJAG_00360","SJAG_01074","SJAG_01117","SJAG_03658","SJAG_02189","SJAG_01176","SJAG_00887","SJAG_03291","SJAG_02558","SJAG_03788","SJAG_04351","SJAG_00681","SJAG_04599","SJAG_03882","SJAG_03232","SJAG_02026","SJAG_05000","SJAG_01917","SJAG_03548","SJAG_00231","SJAG_00750","SJAG_04874","SJAG_01558"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062064"},{"annotations":[102972,72406,105944,107642,99038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097177"},{"annotations":[71438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990275"},{"annotations":[79608,62010,71704,73980,76956,88704,76984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043023"},{"annotations":[99783,103874,74854,77852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043024"},{"annotations":[78552,73343,80697,68880,101630,77987,80319,98628,62999,91638,110988,113052,77253,118034,66629,89125,60682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043022"},{"annotations":[71040,72805,71629,80069,94612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005047"},{"annotations":[87753,70858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070990"},{"annotations":[114240,70725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990446"},{"annotations":[114241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990447"}]},"cv_name":"molecular_function","definition":"Binding to a complex of RNA and protein.","definition_xrefs":["GOC:bf","GOC:go_curators","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00231":null,"SJAG_00360":null,"SJAG_00681":null,"SJAG_00750":null,"SJAG_00887":null,"SJAG_01074":null,"SJAG_01117":null,"SJAG_01176":null,"SJAG_01438":null,"SJAG_01517":null,"SJAG_01558":null,"SJAG_01567":null,"SJAG_01759":null,"SJAG_01806":null,"SJAG_01840":null,"SJAG_01917":null,"SJAG_02026":null,"SJAG_02061":null,"SJAG_02171":null,"SJAG_02189":null,"SJAG_02279":null,"SJAG_02558":null,"SJAG_02746":null,"SJAG_02812":null,"SJAG_02856":null,"SJAG_03012":null,"SJAG_03094":null,"SJAG_03232":null,"SJAG_03291":null,"SJAG_03548":null,"SJAG_03629":null,"SJAG_03658":null,"SJAG_03788":null,"SJAG_03841":null,"SJAG_03882":null,"SJAG_04351":null,"SJAG_04560":null,"SJAG_04599":null,"SJAG_04635":null,"SJAG_04874":null,"SJAG_04914":null,"SJAG_05000":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ribonucleoprotein complex binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNP binding","type":"exact"},{"name":"protein-RNA complex binding","type":"exact"},{"name":"ribonucleoprotein binding","type":"exact"}],"termid":"GO:0043021","terms_by_termid":{"GO:0005047":null,"GO:0043022":null,"GO:0043023":null,"GO:0043024":null,"GO:0062064":null,"GO:0070990":null,"GO:0097177":null,"GO:1990275":null,"GO:1990446":null,"GO:1990447":null}}


id: PBO:0075970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 10","termid":"PBO:0075970"}


id: GO:1902979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA replication termination involved in mitotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA replication termination","termid":"GO:1902317"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260","GO:0007049"],"is_obsolete":false,"name":"mitotic DNA replication termination","synonyms":[{"name":"DNA replication termination involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902979"}


id: MONDO:0006219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the gallbladder. It is characterized by the presence of malignant small cells.","definition_xrefs":["NCIT:C6763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"gallbladder carcinoma","termid":"MONDO:0003220"},{"relation_name":"is_a","term_name":"gallbladder neuroendocrine neoplasm","termid":"MONDO:0024502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"gallbladder small cell neuroendocrine carcinoma","secondary_identifiers":["UMLS:C1333759","MEDGEN:232229","DOID:7133","EFO:1000266"],"synonyms":[{"name":"Oat cell carcinoma of gallbladder","type":"exact"},{"name":"Oat cell carcinoma of the gallbladder","type":"exact"},{"name":"gall bladder small cell carcinoma","type":"exact"},{"name":"gallbladder Oat cell carcinoma","type":"exact"},{"name":"gallbladder small cell NEC","type":"exact"},{"name":"gallbladder small cell carcinoma","type":"exact"},{"name":"gallbladder small cell neuroendocrine carcinoma","type":"exact"},{"name":"small cell carcinoma of gall bladder","type":"exact"},{"name":"small cell carcinoma of gallbladder","type":"exact"},{"name":"small cell carcinoma of the gallbladder","type":"exact"}],"termid":"MONDO:0006219","xrefs":{"Monarch":{"xref_id":"0006219"}}}


id: GO:2000271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of fibroblast apoptotic process","termid":"GO:2000269"},{"relation_name":"positively_regulates","term_name":"fibroblast apoptotic process","termid":"GO:0044346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast apoptotic process","synonyms":[{"name":"positive regulation of fibroblast apoptosis","type":"narrow"}],"termid":"GO:2000271"}


id: GO:0090227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of response to red or far red light","termid":"GO:2000030"},{"relation_name":"regulates","term_name":"red or far-red light signaling pathway","termid":"GO:0010017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of red or far-red light signaling pathway","synonyms":[{"name":"regulation of phytochrome signaling pathway","type":"exact"},{"name":"regulation of red or far-red light signalling pathway","type":"exact"}],"termid":"GO:0090227"}


id: PBO:0079387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 2B class IIb pseudogene 1","termid":"PBO:0079387"}


id: PBO:0068745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5D small nuclear 2, pseudogene","termid":"PBO:0068745"}


id: MOD:01207
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N4 hydrogen atom of an asparagine residue with a carbohydrate-like group composed of Hex1HexNAc1NeuAc2 linked through a glycosidic bond.","definition_xrefs":["Unimod:160#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"Hex1HexNAc1NeuAc2 glycosylated residue","termid":"MOD:00528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(2)","type":"related"},{"name":"Hex1HexNAc1NeuAc2","type":"related"}],"termid":"MOD:01207"}


id: GO:0032650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-1 alpha production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"regulates","term_name":"interleukin-1 alpha production","termid":"GO:0032610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-1 alpha production","secondary_identifiers":["GO:0050705","GO:0050721"],"synonyms":[{"name":"regulation of IL-1 alpha production","type":"exact"},{"name":"regulation of interleukin-1 alpha biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-1 alpha secretion","type":"narrow"}],"termid":"GO:0032650"}


id: PBO:0041433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 90","termid":"PBO:0041433"}


id: GO:0052921
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acetone cyanohydrin = hydrogen cyanide + acetone.","definition_xrefs":["KEGG_REACTION:R01553","MetaCyc:ACETONE-CYANHYDRIN-LYASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete acetone-cyanohydrin acetone-lyase (cyanide-forming) activity (obsolete GO:0052921)","termid":"GO:0052921"}


id: PBO:0046244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL fatty acid elongase 1","termid":"PBO:0046244"}


id: PBO:0117165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CELF6 antisense RNA 1","termid":"PBO:0117165"}


id: PBO:0076611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 29, pseudogene","termid":"PBO:0076611"}


id: GO:0016652
data:
  {"annotated_genes":["SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68294],"is_not":false,"summary":null,"term":"GO:0016652"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces NAD+ or NADP.","definition_xrefs":["EC:1.6.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on NAD(P)H as acceptor","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"oxidoreductase activity, acting on NAD or NADPH, NAD or NADP as acceptor","type":"related"}],"termid":"GO:0016652","terms_by_termid":{"GO:0016652":null}}


id: GO:1904744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of telomeric DNA binding.","definition_xrefs":["GOC:nc","GO_REF:0000059","PMID:24415760","GOC:TermGenie","GOC:BHF","GOC:BHF_telomere"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of telomeric DNA binding (obsolete GO:1904744)","synonyms":[{"name":"activation of telomere binding","type":"narrow"},{"name":"activation of telomeric DNA binding","type":"narrow"},{"name":"activation of telomeric repeat binding","type":"narrow"},{"name":"positive regulation of telomere binding","type":"exact"},{"name":"positive regulation of telomeric repeat binding","type":"exact"},{"name":"up regulation of telomere binding","type":"exact"},{"name":"up regulation of telomeric DNA binding","type":"exact"},{"name":"up regulation of telomeric repeat binding","type":"exact"},{"name":"up-regulation of telomere binding","type":"exact"},{"name":"up-regulation of telomeric DNA binding","type":"exact"},{"name":"up-regulation of telomeric repeat binding","type":"exact"},{"name":"upregulation of telomere binding","type":"exact"},{"name":"upregulation of telomeric DNA binding","type":"exact"},{"name":"upregulation of telomeric repeat binding","type":"exact"}],"termid":"GO:1904744"}


id: MONDO:1010808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in rock pigeon.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, rock pigeon","secondary_identifiers":["OMIA:000810-8932"],"termid":"MONDO:1010808","xrefs":{"Monarch":{"xref_id":"1010808"}}}


id: PBO:0055061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2477","termid":"PBO:0055061"}


id: GO:0072151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesangial cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"mesangial cell differentiation","termid":"GO:0072007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesangial cell fate commitment","termid":"GO:0072151"}


id: PBO:0071906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 44","termid":"PBO:0071906"}


id: PBO:0001997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Erj5 (predicted)","termid":"PBO:0001997"}


id: GO:0045224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of CD4.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of CD4 production (obsolete GO:0045224)","synonyms":[{"name":"activation of CD4 biosynthetic process","type":"narrow"},{"name":"positive regulation of CD4 anabolism","type":"exact"},{"name":"positive regulation of CD4 biosynthesis","type":"exact"},{"name":"positive regulation of CD4 biosynthetic process","type":"exact"},{"name":"positive regulation of CD4 formation","type":"exact"},{"name":"positive regulation of CD4 synthesis","type":"exact"},{"name":"stimulation of CD4 biosynthetic process","type":"narrow"},{"name":"up regulation of CD4 biosynthetic process","type":"exact"},{"name":"up-regulation of CD4 biosynthetic process","type":"exact"},{"name":"upregulation of CD4 biosynthetic process","type":"exact"}],"termid":"GO:0045224"}


id: GO:0044552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont causes vasodilation of blood vessels in its host organism, usually causing a reduction in blood pressure. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:15637157","GOC:jl","GOC:ecd"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated vasodilation in host (obsolete GO:0044552)","synonyms":[{"name":"modulation of vasodilation in other organism","type":"related"},{"name":"regulation of vasodilation in other organism","type":"related"},{"name":"vasodilation in other organism","type":"exact"}],"termid":"GO:0044552"}


id: GO:0060315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the activity of a ryanodine-sensitive calcium-release channel. The ryanodine-sensitive calcium-release channel catalyzes the transmembrane transfer of a calcium ion by a channel that opens when a ryanodine class ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051280"},{"relation_name":"is_a","term_name":"regulation of ryanodine-sensitive calcium-release channel activity","termid":"GO:0060314"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of ryanodine-sensitive calcium-release channel activity","termid":"GO:0060315"}


id: PBO:0083950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma subunit of the translation initiation factor eIF2; involved in the identification of the start codon; binds GTP when forming the ternary complex with GTP and tRNAi-Met; mutations in human ortholog cause X-linked intellectual disability (XLID) syndrome","termid":"PBO:0083950"}


id: GO:0060215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A first transient wave of blood cell production that, in vertebrates, gives rise to erythrocytes (red blood cells) and myeloid cells.","definition_xrefs":["GOC:bf","PMID:15378083","PMID:15617691","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic hemopoiesis","termid":"GO:0035162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primitive hemopoiesis","synonyms":[{"name":"primitive haematopoiesis","type":"exact"},{"name":"primitive haemopoiesis","type":"exact"},{"name":"primitive hematopoiesis","type":"related"}],"termid":"GO:0060215"}


id: GO:0042868
data:
  {"annotated_genes":["SJAG_01176","SJAG_00266","SJAG_01717","SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108335],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0060195"},{"annotations":[106630,71275,88694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071040"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01176":null,"SJAG_01717":null,"SJAG_03745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antisense RNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"antisense RNA metabolism","type":"exact"}],"termid":"GO:0042868","terms_by_termid":{"GO:0060195":null,"GO:0071040":null}}


id: PBO:0031621
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sporulation","termid":"PBO:0031621"}


id: MONDO:0012296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lipomyelomeningocele is a rare neural tube closure defect characterized by a subcutaneous lipoma that extends through a defect in the lumbodorsal fascia, vertebral neural arch, and dura. This painless lesion can occur anywhere along the spinal canal but usually is found in the sacral or lumbar region. If left untreated it can cause tethered cord syndrome.","definition_xrefs":["Orphanet:268835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"lipomyelomeningocele","secondary_identifiers":["UMLS:C1836022","icd11.foundation:1919145296","GARD:10053","SCTID:104431000119107","OMIM:609537","MEDGEN:332109","ICD9:214.8","MESH:C537030"],"synonyms":[{"name":"familial lipomyelomeningocele","type":"related"},{"name":"lipomyelomeningocele","type":"exact"}],"termid":"MONDO:0012296","xrefs":{"Monarch":{"xref_id":"0012296"}}}


id: PR:O74852
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC18.02 gene.","definition_xrefs":["UniProtKB:O74852","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C18.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.02","synonyms":[{"name":"Spom972h-SPCC18.02","type":"exact"}],"termid":"PR:O74852"}


id: PR:O42859
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 28S ribosomal protein S14, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein mrp2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.07c","secondary_identifiers":["UniProtKB:O42859"],"synonyms":[{"name":"Spom972h-MRPS14","type":"exact"}],"termid":"PR:O42859"}


id: MONDO:0019090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete meconium aspiration syndrome (obsolete MONDO:0019090)","termid":"MONDO:0019090","xrefs":{"Monarch":{"xref_id":"0019090"}}}


id: MONDO:0006684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Increased intracellular or extracellular fluid in brain tissue. Cytotoxic brain edema (swelling due to increased intracellular fluid) is indicative of a disturbance in cell metabolism, and is commonly associated with hypoxic or ischemic injuries (see hypoxia, brain). An increase in extracellular fluid may be caused by increased brain capillary permeability (vasogenic edema), an osmotic gradient, local blockages in interstitial fluid pathways, or by obstruction of csf flow (e.g., obstructive hydrocephalus). (From Childs Nerv Syst 1992 Sep; 8(6):301-6)","definition_xrefs":["MESH:D001929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain edema","secondary_identifiers":["DOID:4724","MEDGEN:2337","MedDRA:10006121","SCTID:2032001","EFO:1000845","ICD9:348.5","UMLS:C0006114"],"synonyms":[{"name":"intracranial swelling","type":"exact"},{"name":"wet brain","type":"exact"}],"termid":"MONDO:0006684","xrefs":{"Monarch":{"xref_id":"0006684"}}}


id: GO:1900929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-tyrosine import into the cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"L-tyrosine import across plasma membrane","termid":"GO:1903808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of L-tyrosine import across plasma membrane","synonyms":[{"name":"regulation of L-tyrosine import","type":"broad"},{"name":"regulation of L-tyrosine uptake","type":"exact"}],"termid":"GO:1900929"}


id: PBO:0004680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF953 family protein","termid":"PBO:0004680"}


id: PATO:0001958
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability of size which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"variability of size","termid":"PATO:0001956"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased variability of size","synonyms":[{"name":"high variability of size","type":"exact"}],"termid":"PATO:0001958"}


id: GO:0019440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-tryptophan into other compounds, including indole-3-acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan catabolic process","termid":"GO:0006569"},{"relation_name":"is_a","term_name":"indoleacetic acid metabolic process","termid":"GO:0009683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-tryptophan catabolic process to indole-3-acetate","secondary_identifiers":["MetaCyc:TRPIAACAT-PWY"],"synonyms":[{"name":"tryptophan breakdown to indole-3-acetate","type":"exact"},{"name":"tryptophan catabolic process to IAA","type":"exact"},{"name":"tryptophan catabolic process to indole-3-acetate","type":"exact"},{"name":"tryptophan catabolic process to indoleacetic acid","type":"exact"},{"name":"tryptophan catabolism to indoleacetic acid","type":"exact"},{"name":"tryptophan degradation to indole-3-acetate","type":"exact"}],"termid":"GO:0019440"}


id: MONDO:0013231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the LRAT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"Leber congenital amaurosis 14","secondary_identifiers":["UMLS:C2750063","OMIM:613341","MEDGEN:442375","DOID:0110188","ICD10CM:H35.5","GARD:10883","MESH:C567636"],"synonyms":[{"name":"LCA14","type":"exact"},{"name":"LRAT Leber congenital amaurosis","type":"exact"},{"name":"Leber congenital amaurosis 14","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in LRAT","type":"exact"},{"name":"Leber congenital amaurosis type 14","type":"exact"},{"name":"retinal dystrophy, early-onset Severe, LRAT-related","type":"related"},{"name":"retinal dystrophy, early-onset severe","type":"exact"},{"name":"retinitis pigmentosa, juvenile","type":"related"},{"name":"retinitis pigmentosa, juvenile, LRAT-related","type":"related"}],"termid":"MONDO:0013231","xrefs":{"Monarch":{"xref_id":"0013231"}}}


id: GO:0006661
data:
  {"annotated_genes":["SJAG_06383","SJAG_02613","SJAG_04975","SJAG_03506","SJAG_03292","SJAG_01236","SJAG_04881","SJAG_03115","SJAG_03131","SJAG_04924","SJAG_03170","SJAG_05327","SJAG_04930","SJAG_04537","SJAG_01571","SJAG_04119","SJAG_01227","SJAG_00295","SJAG_00053","SJAG_00831","SJAG_02523","SJAG_02488","SJAG_01860","SJAG_03672","SJAG_01876","SJAG_04337","SJAG_00846","SJAG_03878","SJAG_01570","SJAG_05278","SJAG_00114","SJAG_03066","SJAG_00068","SJAG_04165","SJAG_05330","SJAG_01148","SJAG_02776","SJAG_01416","SJAG_06425","SJAG_00063","SJAG_02321","SJAG_01863","SJAG_03801","SJAG_02913","SJAG_00296","SJAG_00999","SJAG_04545","SJAG_02804","SJAG_02289"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76941,80589,92962,117398,119224],"is_not":false,"summary":null,"term":"GO:0006661"},{"annotations":[92172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902635"},{"annotations":[73502,78240,75915,73875,57895,76796,77832,78214,75322,77504,87757,93326,58366,60812,70230,75886,58356,76812,73095,77824,58252,78001,62739,104052,89878,104114,72198,63394,63787,78575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[104722,90736],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902647"},{"annotations":[111634,118865,97028,111509,91545,93554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046854"},{"annotations":[71814,61685,61837,63369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036092"},{"annotations":[117924],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylinositol, any glycophospholipid in which the sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"},{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00063":null,"SJAG_00068":null,"SJAG_00114":null,"SJAG_00295":null,"SJAG_00296":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_00999":null,"SJAG_01148":null,"SJAG_01227":null,"SJAG_01236":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01571":null,"SJAG_01860":null,"SJAG_01863":null,"SJAG_01876":null,"SJAG_02289":null,"SJAG_02321":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02613":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03131":null,"SJAG_03170":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04537":null,"SJAG_04545":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04930":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_05330":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylinositol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-1483226","Reactome:R-HSA-1660514","Reactome:R-HSA-1660517","GO:0046489","Reactome:R-HSA-1483248","Reactome:R-HSA-1660499","Reactome:R-HSA-1660516"],"synonyms":[{"name":"PtdIns biosynthesis","type":"exact"},{"name":"PtdIns biosynthetic process","type":"exact"},{"name":"phosphatidylinositol anabolism","type":"exact"},{"name":"phosphatidylinositol biosynthesis","type":"exact"},{"name":"phosphatidylinositol formation","type":"exact"},{"name":"phosphatidylinositol synthesis","type":"exact"},{"name":"phosphoinositide biosynthesis","type":"exact"},{"name":"phosphoinositide biosynthetic process","type":"exact"}],"termid":"GO:0006661","terms_by_termid":{"GO:0006506":null,"GO:0006661":null,"GO:0036092":null,"GO:0046854":null,"GO:1902635":null,"GO:1902647":null,"GO:1902648":null}}


id: PBO:0073336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 12","termid":"PBO:0073336"}


id: MONDO:0025417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poxvirus infection of poultry and other birds characterized by the formation of wart-like nodules on the skin and diphtheritic necrotic masses (cankers) in the upper digestive and respiratory tracts.","definition_xrefs":["MESH:D005586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fowlpox","synonyms":[{"name":"Bird pox","type":"related"},{"name":"Birdpox","type":"related"},{"name":"Diphtherias, fowl","type":"related"},{"name":"Variola avium","type":"related"},{"name":"diphtheria, fowl","type":"related"},{"name":"epithelioma contagiosum","type":"related"},{"name":"fowl Diphtherias","type":"related"},{"name":"fowl diphtheria","type":"related"},{"name":"fowl pox","type":"related"},{"name":"pox, Bird","type":"related"},{"name":"pox, fowl","type":"related"}],"termid":"MONDO:0025417","xrefs":{"Monarch":{"xref_id":"0025417"}}}


id: MONDO:0021160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An cystitis caused by infection with Neisseria gonorrhoeae.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"bacterial urinary tract infection","termid":"MONDO:0005247"},{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal cystitis","secondary_identifiers":["UMLS:C0473230","MEDGEN:633096","icd11.foundation:638246732","SCTID:197848003"],"synonyms":[{"name":"Neisseria gonorrhoeae caused cystitis","type":"exact"},{"name":"Neisseria gonorrhoeae cystitis","type":"exact"}],"termid":"MONDO:0021160","xrefs":{"Monarch":{"xref_id":"0021160"}}}


id: PR:O74397
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asparagine synthetase domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03385","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase domain-containing protein C4F6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.11c","secondary_identifiers":["UniProtKB:O74397"],"synonyms":[{"name":"Spom972h-ASNSD1","type":"exact"}],"termid":"PR:O74397"}


id: GO:0002891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an immunoglobulin mediated immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of B cell mediated immunity","termid":"GO:0002714"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"positively_regulates","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of immunoglobulin mediated immune response","synonyms":[{"name":"activation of immunoglobulin mediated immune response","type":"narrow"},{"name":"stimulation of immunoglobulin mediated immune response","type":"narrow"},{"name":"up regulation of immunoglobulin mediated immune response","type":"exact"},{"name":"up-regulation of immunoglobulin mediated immune response","type":"exact"},{"name":"upregulation of immunoglobulin mediated immune response","type":"exact"}],"termid":"GO:0002891"}


id: GO:0098940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from presynapse to postynapse, across the synaptic cleft, mediated by nitric oxide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde trans-synaptic signaling","termid":"GO:0098916"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by nitric oxide","termid":"GO:0099548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"anterograde trans-synaptic signaling by nitric oxide","termid":"GO:0098940"}


id: PBO:0043819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine family member 9","termid":"PBO:0043819"}


id: PBO:0044698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 pseudogene 1","termid":"PBO:0044698"}


id: MONDO:1011107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephropathy in dogs in which the cause of the disease is a mutation in the COL4A4 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"nephropathy, dog","termid":"MONDO:1012186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephropathy, COL4A4-related, dog","secondary_identifiers":["OMIA:002618-9615"],"termid":"MONDO:1011107","xrefs":{"Monarch":{"xref_id":"1011107"}}}


id: MONDO:0003563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diffuse replacement of the lung tissue by connective tissue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis","termid":"MONDO:0002771"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse pulmonary fibrosis","secondary_identifiers":["NCIT:C27216","DOID:5641","MEDGEN:167847","UMLS:C0865849"],"termid":"MONDO:0003563","xrefs":{"Monarch":{"xref_id":"0003563"}}}


id: MONDO:0019531
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87192],"is_not":false,"summary":null,"term":"MONDO:0019531"}]},"cv_name":"mondo","definition":"Haemolytic anemia due to glutathione reductase (GSR) deficiency is characterized by nearly complete absence of GSR activity in erythrocytes.","definition_xrefs":["Orphanet:90030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nonspherocytic hemolytic anemia","termid":"MONDO:0006506"},{"relation_name":"is_a","term_name":"inherited glutathione metabolism disease","termid":"MONDO:0040566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0019241"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0019241","MONDO:0005570","MONDO:0002280","MONDO:0005066"],"is_obsolete":false,"name":"hemolytic anemia due to glutathione reductase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684855","UMLS:C5231513","MONDO:0032856","GARD:16784","OMIM:618660"],"synonyms":[{"name":"hemolytic anemia due to glutathione reductase deficiency","type":"exact"}],"termid":"MONDO:0019531","terms_by_termid":{"MONDO:0019531":null},"xrefs":{"Monarch":{"xref_id":"0019531"}}}


id: GO:1903905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of T cell polarity.","definition_xrefs":["GOC:als","PMID:23575248","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"is_a","term_name":"regulation of establishment of T cell polarity","termid":"GO:1903903"},{"relation_name":"positively_regulates","term_name":"establishment of T cell polarity","termid":"GO:0001768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007155","GO:0008150","GO:0007163"],"is_obsolete":false,"name":"positive regulation of establishment of T cell polarity","synonyms":[{"name":"activation of T cell polarization","type":"narrow"},{"name":"activation of T lymphocyte polarization","type":"narrow"},{"name":"activation of T-cell polarization","type":"narrow"},{"name":"activation of establishment of T cell polarity","type":"narrow"},{"name":"activation of establishment of T lymphocyte polarity","type":"narrow"},{"name":"activation of establishment of T-cell polarity","type":"narrow"},{"name":"activation of establishment of T-lymphocyte polarity","type":"narrow"},{"name":"positive regulation of T cell polarization","type":"exact"},{"name":"positive regulation of T lymphocyte polarization","type":"exact"},{"name":"positive regulation of T-cell polarization","type":"exact"},{"name":"positive regulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"positive regulation of establishment of T-cell polarity","type":"exact"},{"name":"positive regulation of establishment of T-lymphocyte polarity","type":"exact"},{"name":"up regulation of T cell polarization","type":"exact"},{"name":"up regulation of T lymphocyte polarization","type":"exact"},{"name":"up regulation of T-cell polarization","type":"exact"},{"name":"up regulation of establishment of T cell polarity","type":"exact"},{"name":"up regulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"up regulation of establishment of T-cell polarity","type":"exact"},{"name":"up regulation of establishment of T-lymphocyte polarity","type":"exact"},{"name":"up-regulation of T cell polarization","type":"exact"},{"name":"up-regulation of T lymphocyte polarization","type":"exact"},{"name":"up-regulation of T-cell polarization","type":"exact"},{"name":"up-regulation of establishment of T cell polarity","type":"exact"},{"name":"up-regulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"up-regulation of establishment of T-cell polarity","type":"exact"},{"name":"up-regulation of establishment of T-lymphocyte polarity","type":"exact"},{"name":"upregulation of T cell polarization","type":"exact"},{"name":"upregulation of T lymphocyte polarization","type":"exact"},{"name":"upregulation of T-cell polarization","type":"exact"},{"name":"upregulation of establishment of T cell polarity","type":"exact"},{"name":"upregulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"upregulation of establishment of T-cell polarity","type":"exact"},{"name":"upregulation of establishment of T-lymphocyte polarity","type":"exact"}],"termid":"GO:1903905"}


id: RO:0002025
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A 'has effector activity' B if A and B are GO molecular functions (GO_0003674),  A 'has component activity' B and B is the effector (output function) of B.  Each compound function has only one effector activity.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"has_component_activity","termid":"RO:0002017"},{"relation_name":"is_a","term_name":"regulates","termid":"RO:0002211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_effector_activity","termid":"RO:0002025"}


id: PBO:0059366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18B pseudogene 1","termid":"PBO:0059366"}


id: MONDO:0007704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis susceptibility 2","secondary_identifiers":["UMLS:C3887526","OMIM:140600","MEDGEN:854385"],"synonyms":[{"name":"Dipoa","type":"related"},{"name":"Heberden nodes","type":"related"},{"name":"MATN3 osteoarthritis","type":"exact"},{"name":"OADIP","type":"related"},{"name":"OS2","type":"related"},{"name":"hand osteoarthritis","type":"related"},{"name":"osteoarthritis caused by mutation in MATN3","type":"exact"},{"name":"osteoarthritis of distal interphalangeal joints","type":"related"},{"name":"osteoarthritis susceptibility 2","type":"exact"},{"name":"osteoarthritis susceptibility type 2","type":"exact"}],"termid":"MONDO:0007704","xrefs":{"Monarch":{"xref_id":"0007704"}}}


id: MONDO:0023663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete macrocephaly mesodermal hamartoma spectrum (obsolete MONDO:0023663)","secondary_identifiers":["MESH:C537716"],"synonyms":[{"name":"Elattoproteus syndrome","type":"related"},{"name":"gigantism, partial, of hands and feet, nevi, hemihypertrophy, and macrocephaly","type":"related"},{"name":"hemihypertrophy and macrocephaly","type":"related"},{"name":"partial gigantism of hands and feet, nevi, hemihypertrophy, macrocephaly","type":"related"}],"termid":"MONDO:0023663","xrefs":{"Monarch":{"xref_id":"0023663"}}}


id: PBO:0091620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein]reductase","termid":"PBO:0091620"}


id: FYPO:0001452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to water deprivation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to water deprivation","synonyms":[{"name":"increased growth during cellular response to water deprivation","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to water deprivation","type":"exact"},{"name":"resistance to water deprivation during mitotic cell cycle","type":"related"},{"name":"resistance to water deprivation during vegetative growth","type":"exact"},{"name":"resistant to dehydration","type":"exact"},{"name":"resistant to water deprivation","type":"exact"}],"termid":"FYPO:0001452"}


id: PBO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin-associated protein Pds5","termid":"PBO:0001234"}


id: PBO:0003674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional coactivator, multiprotein bridging factor Mbf1 (predicted)","termid":"PBO:0003674"}


id: PBO:0109055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein Ank1","termid":"PBO:0109055"}


id: GO:1905288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a vascular associated smooth muscle cell.","definition_xrefs":["GOC:rph","GOC:BHF","GO_REF:0000085","GOC:BHF_miRNA","GOC:TermGenie","PMID:26493107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell apoptotic process","termid":"GO:0034390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell apoptotic process","synonyms":[{"name":"VSMC apoptosis","type":"narrow"},{"name":"VSMC apoptotic process","type":"exact"},{"name":"vascular associated smooth muscle cell apoptosis","type":"narrow"},{"name":"vascular smooth muscle cell apoptosis","type":"narrow"},{"name":"vascular smooth muscle cell apoptotic process","type":"exact"}],"termid":"GO:1905288"}


id: GO:0039636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of cell wall biogenesis in the host organism. Cell wall biogenesis includes the biosynthesis of constituent macromolecules, and the assembly and arrangement of these constituent parts.","definition_xrefs":["GOC:bm","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cell wall biogenesis","synonyms":[{"name":"suppression by virus of host cell wall biogenesis","type":"narrow"}],"termid":"GO:0039636"}


id: PBO:0072104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 2","termid":"PBO:0072104"}


id: PBO:0090521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-pass membrane and CBS domain protein, implicated in magnesium homeostasis and endomembrane organization","termid":"PBO:0090521"}


id: PBO:0076204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 14","termid":"PBO:0076204"}


id: MONDO:0004123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete laryngeal small cell carcinoma (obsolete MONDO:0004123)","termid":"MONDO:0004123","xrefs":{"Monarch":{"xref_id":"0004123"}}}


id: PBO:0052719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 11","termid":"PBO:0052719"}


id: PBO:0031912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP endonuclease, minor transcript isoform Apn1","termid":"PBO:0031912"}


id: MONDO:0019400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete testicular seminomatous germ cell tumor (obsolete MONDO:0019400)","termid":"MONDO:0019400","xrefs":{"Monarch":{"xref_id":"0019400"}}}


id: PR:000037085
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tropomyosin cdc8 homodimer (Schizosaccharomyces pombe) that is compose of two subunits of the non-acetylated form of tropomyosin cdc8.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropomyosin cdc8 homodimer (Schizosaccharomyces pombe)","termid":"PR:000037083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin cdc8 homodimer, non-acetylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC27F1.02c","synonyms":[{"name":"Spom-(cdc8/AcRes-)*2","type":"exact"}],"termid":"PR:000037085"}


id: PBO:0084510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of a complex (Isw1b) with Isw1p and Ioc2p; interacts directly with H3K36me3 nucleosomes through its PWWP domain to recruit the Isw1b complex to open reading frames in a Set2p-dependent manner; Isw1b exhibits nucleosome-stimulated ATPase activity and acts within coding regions to coordinate transcription elongation with termination and processing","termid":"PBO:0084510"}


id: PBO:0026834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_poly(U)_polymerase_activity","termid":"PBO:0026834"}


id: PBO:0072730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate receptor 1","termid":"PBO:0072730"}


id: PBO:0017810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pig-U, Gab1 (predicted)","termid":"PBO:0017810"}


id: GO:0061118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"regulates","term_name":"chemotaxis to cAMP","termid":"GO:0043327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of positive chemotaxis to cAMP","termid":"GO:0061118"}


id: PR:O14337
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L7, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.02c","synonyms":[{"name":"Spom972h-mrpl7","type":"exact"}],"termid":"PR:O14337"}


id: PBO:0090124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protease Ste24","termid":"PBO:0090124"}


id: PBO:0011465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF890 family protein, predicted methyltransferase","termid":"PBO:0011465"}


id: MONDO:0850112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mature T-cell and NK-cell non-Hodgkin lymphoma","termid":"MONDO:0000430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"breast implant-associated anaplastic large cell lymphoma","secondary_identifiers":["NCIT:C139012","Orphanet:667662","UMLS:C4528210","DOID:0070333","icd11.foundation:1216213663","MEDGEN:1611347"],"termid":"MONDO:0850112","xrefs":{"Monarch":{"xref_id":"0850112"}}}


id: PBO:0085853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; mtc3 is synthetically sick with cdc13-1","termid":"PBO:0085853"}


id: MONDO:0008156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sclerosing disorder of the skeleton characterized by increased bone density that classically displays the radiographic sign of ''sandwich vertebrae'' (dense bands of sclerosis parallel to the vertebral endplates).","definition_xrefs":["Orphanet:53"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete unclassified primitive or secondary maculopathy (obsolete MONDO:0020244)","termid":"MONDO:0020244"},{"relation_name":"excluded_subClassOf","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"},{"relation_name":"is_a","term_name":"autosomal dominant osteopetrosis","termid":"MONDO:0020645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant osteopetrosis 2","secondary_identifiers":["OMIM:166600","SCTID:725050005","GARD:383","DOID:0110938","UMLS:C3179239","MEDGEN:465707"],"synonyms":[{"name":"Albers-Schonberg disease, autosomal dominant","type":"related"},{"name":"Albers-Schonberg osteopetrosis","type":"exact"},{"name":"Albers-Schönberg osteopetrosis","type":"exact"},{"name":"OPTA2","type":"exact"},{"name":"autosomal dominant Albers-Schonberg disease","type":"exact"},{"name":"autosomal dominant osteopetrosis type 2","type":"exact"},{"name":"autosomal dominant osteopetrosis type II","type":"exact"},{"name":"marble bones, autosomal dominant","type":"related"},{"name":"osteopetrosis autosomal dominant type 2","type":"exact"},{"name":"osteopetrosis, autosomal dominant 2","type":"related"},{"name":"osteopetrosis, autosomal dominant type 2","type":"exact"},{"name":"osteopetrosis, autosomal dominant, type 2","type":"related"},{"name":"osteosclerosis Fragilis generalisata","type":"related"}],"termid":"MONDO:0008156","xrefs":{"Monarch":{"xref_id":"0008156"}}}


id: PBO:0046528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum protein 27","termid":"PBO:0046528"}


id: PBO:0088787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit G","termid":"PBO:0088787"}


id: MONDO:0013287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal agammaglobulinemia in which the cause of the disease is a mutation in the IGLL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal agammaglobulinemia","termid":"MONDO:0011096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"agammaglobulinemia 2, autosomal recessive","secondary_identifiers":["UMLS:C3150750","DOID:0081135","GARD:15672","MEDGEN:462100","DOID:0060024","OMIM:613500"],"synonyms":[{"name":"AGM2","type":"exact"},{"name":"IGLL1 autosomal agammaglobulinemia","type":"exact"},{"name":"agammaglobulinemia 2, autosomal recessive","type":"exact"},{"name":"agammaglobulinemia, autosomal recessive, due to IGLL1 defect","type":"exact"},{"name":"autosomal agammaglobulinemia caused by mutation in IGLL1","type":"exact"},{"name":"lambda 5 deficiency","type":"exact"}],"termid":"MONDO:0013287","xrefs":{"Monarch":{"xref_id":"0013287"}}}


id: GO:0048269
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimeric enzyme complex composed of variable numbers of catalytic alpha subunits, and noncatalytic beta subunits. The beta subunits are believed to have a regulatory function. The enzyme complex catalyzes the synthesis of S-adenosylmethionine (AdoMet), which is the major methyl group donor, participating in the methylation of proteins, DNA, RNA, phospholipids, and other small molecules.","definition_xrefs":["PMID:25075345","GOC:jid","PMID:10644686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"methionine adenosyltransferase complex","synonyms":[{"name":"MAT complex","type":"exact"}],"termid":"GO:0048269"}


id: PBO:0081046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 2","termid":"PBO:0081046"}


id: PBO:0054915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2329","termid":"PBO:0054915"}


id: MOD:00121
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-threonine residue by a thioether bond to form (2S,3S,2'R)-3-methyllanthionine.","definition_xrefs":["RESID:AA0112","PubMed:3769923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-methyllanthionine","termid":"MOD:01981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"(2S,3S,2'R)-3-methyllanthionine","synonyms":[{"name":"(2S,3S)-2-amino-3-([(2R)-2-amino-2-carboxyethyl]sulfanyl)butanoic acid","type":"exact"},{"name":"(2S,3S,2'R)-2-amino-3-[(2-amino-2-carboxyethyl)thio]butanoic acid","type":"exact"},{"name":"(2S,3S,2'R)-3-methyllanthionine","type":"exact"},{"name":"(2S,3S,6R)-2,6-diamino-3-methyl-4-thiaheptanedioic acid","type":"exact"},{"name":"(2S,3S,6R)-3-methyllanthionine","type":"exact"},{"name":"(2S-[2R*,3R*(S*)])-2-amino-3-[(2-amino-2-carboxyethyl)thio]butanoic acid","type":"exact"},{"name":"3-methyl-D,L-lanthionine","type":"exact"},{"name":"CROSSLNK Beta-methyllanthionine (Cys-Thr)","type":"exact"},{"name":"CROSSLNK Beta-methyllanthionine (Thr-Cys)","type":"exact"},{"name":"XLNK-SCys-3Dhb","type":"exact"},{"name":"cysteine-3-D-butyrine thioether","type":"exact"}],"termid":"MOD:00121"}


id: PBO:0076295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapse differentiation inducing 1 like","termid":"PBO:0076295"}


id: MONDO:0024582
data:
  {"annotated_genes":["SJAG_00997","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87644,87645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"A benign, borderline, or malignant neoplasm that affects the male reproductive system. Representative examples include benign prostate phyllodes tumor, benign testicular Sertoli cell tumor, prostatic intraepithelial neoplasia, prostate carcinoma, testicular seminoma, and testicular embryonal carcinoma.","definition_xrefs":["NCIT:C3054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"reproductive system neoplasm","termid":"MONDO:0006054"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"is_obsolete":false,"name":"male reproductive system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:239.5","MEDGEN:42196","UMLS:C0017417","SCTID:126895004"],"synonyms":[{"name":"Male reproductive system neoplasm","type":"exact"},{"name":"Male reproductive system tumor","type":"exact"},{"name":"Male reproductive system tumour","type":"exact"},{"name":"male reproductive organ neoplasm","type":"exact"},{"name":"male reproductive organ tumor","type":"exact"},{"name":"male reproductive organ tumour","type":"exact"},{"name":"neoplasm of Male reproductive system","type":"exact"},{"name":"neoplasm of male reproductive organ","type":"exact"},{"name":"neoplasm of the Male reproductive system","type":"exact"},{"name":"tumor of Male reproductive system","type":"exact"},{"name":"tumor of male reproductive organ","type":"exact"},{"name":"tumor of the Male reproductive system","type":"exact"},{"name":"tumour of Male reproductive system","type":"exact"},{"name":"tumour of male reproductive organ","type":"exact"},{"name":"tumour of the Male reproductive system","type":"exact"}],"termid":"MONDO:0024582","terms_by_termid":{"MONDO:0013872":null},"xrefs":{"Monarch":{"xref_id":"0024582"}}}


id: GO:0098922
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the dense core granule membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"dense core granule membrane","termid":"GO:0032127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of dense core granule membrane","termid":"GO:0098922"}


id: FYPO:0001378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular calcium level","termid":"FYPO:0001198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular calcium level during cellular response to salt stress","synonyms":[{"name":"increased calcium accumulation during cellular response to salt stress","type":"related"},{"name":"increased cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"increased cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"increased cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001378"}


id: MONDO:0000774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune form of peripheral neuropathy.","definition_xrefs":["MONDO:patterns/autoimmune"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"excluded_subClassOf","term_name":"autoimmune disorder of peripheral nervous system","termid":"MONDO:0000590"},{"relation_name":"is_a","term_name":"autoimmune disorder of peripheral nervous system","termid":"MONDO:0000590"},{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune neuropathy","secondary_identifiers":["DOID:0060499","MEDGEN:1843469","DOID:0040087","UMLS:C2748363"],"synonyms":[{"name":"autoimmune peripheral neuropathy","type":"exact"}],"termid":"MONDO:0000774","xrefs":{"Monarch":{"xref_id":"0000774"}}}


id: GO:0043523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptotic process in neurons.","definition_xrefs":["GOC:go_curators","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron apoptotic process","synonyms":[{"name":"regulation of apoptosis of neuronal cells","type":"exact"},{"name":"regulation of apoptosis of neurons","type":"exact"},{"name":"regulation of neuron apoptosis","type":"narrow"},{"name":"regulation of neuron programmed cell death","type":"exact"},{"name":"regulation of neuronal cell programmed cell death","type":"exact"},{"name":"regulation of programmed cell death of neuronal cells","type":"exact"},{"name":"regulation of programmed cell death, neurons","type":"exact"}],"termid":"GO:0043523"}


id: GO:0099004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any signal transduction pathway involving calmodulin dependent kinase activity.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete calmodulin dependent kinase signaling pathway (obsolete GO:0099004)","synonyms":[{"name":"CAMK signaling pathway","type":"exact"}],"termid":"GO:0099004"}


id: PBO:0047811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box M1","termid":"PBO:0047811"}


id: PBO:0051974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IZUMO1 receptor, JUNO","termid":"PBO:0051974"}


id: PBO:0002964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family helicase Ino80","termid":"PBO:0002964"}


id: SO:0005836
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence that is involved in the control of a biological process.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_member_region","termid":"SO:0000831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region","secondary_identifiers":["http://en.wikipedia.org/wiki/Regulatory_region"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:other","type":"exact"},{"name":"regulatory region","type":"exact"}],"termid":"SO:0005836"}


id: PBO:0077094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCL1A interacting lncRNA, retroperitoneal liposarcoma associated","termid":"PBO:0077094"}


id: MONDO:0004457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papilloma that arises from the ciliated respiratory mucosa that lines the maxillary sinus. It is classified as inverted papilloma and oncocytic papilloma.","definition_xrefs":["NCIT:C6839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus Schneiderian papilloma","termid":"MONDO:0006353"},{"relation_name":"is_a","term_name":"benign neoplasm of maxillary sinus","termid":"MONDO:0021484"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxillary sinus Schneiderian papilloma","secondary_identifiers":["DOID:8093","MEDGEN:235306","UMLS:C1334646"],"synonyms":[{"name":"Schneiderian papilloma of maxillary sinus","type":"related"},{"name":"Schneiderian papilloma of the maxillary sinus","type":"exact"},{"name":"maxillary sinus Schneiderian papilloma","type":"exact"},{"name":"maxillary sinus paranasal sinus Schneiderian papilloma","type":"exact"},{"name":"paranasal sinus Schneiderian papilloma of maxillary sinus","type":"exact"}],"termid":"MONDO:0004457","xrefs":{"Monarch":{"xref_id":"0004457"}}}


id: MONDO:0003833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete severe combined immunodeficiency (obsolete MONDO:0003833)","synonyms":[{"name":"obsolete severe combined immunodeficiency (disease)","type":"exact"}],"termid":"MONDO:0003833","xrefs":{"Monarch":{"xref_id":"0003833"}}}


id: PBO:0047914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, 5-azacytidine type, common, fra(9)(q12)","termid":"PBO:0047914"}


id: MONDO:0016710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Medulloblastoma with extensive nodularity (MBEN) is a histological variant of medulloblastoma, an embryonic malignancy, most often located in the inferior medullary velum and then growing into the fourth ventricle, and presenting in infants and young children with symptoms of increased intracranial pressure such as headache, listlessness, vomiting, diplopia and papilledema. It is often associated with Gorlin syndrome and has a relatively good prognosis.","definition_xrefs":["Orphanet:251858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma with extensive nodularity","secondary_identifiers":["ONCOTREE:MBEN","MEDGEN:233759","DOID:3873","UMLS:C1334970","ICDO:9471/3","GARD:17214","NCIT:C5407"],"synonyms":[{"name":"MBEN","type":"exact"},{"name":"cerebellar neuroblastoma","type":"exact"},{"name":"medulloblastoma with extensive nodularity","type":"exact"},{"name":"medulloblastoma with extensive nodularity and advanced neuronal differentiation","type":"exact"},{"name":"nodular medulloblastoma","type":"exact"}],"termid":"MONDO:0016710","xrefs":{"Monarch":{"xref_id":"0016710"}}}


id: PBO:0080115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UVRAG divergent transcript","termid":"PBO:0080115"}


id: GO:2001172
data:
  {"annotated_genes":["SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96909],"is_not":false,"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucose catabolic process to ethanol.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucose metabolic process","termid":"GO:0010907"},{"relation_name":"is_a","term_name":"regulation of glycolytic fermentation to ethanol","termid":"GO:2001154"},{"relation_name":"positively_regulates","term_name":"glycolytic fermentation to ethanol","termid":"GO:0019655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"positive regulation of glycolytic fermentation to ethanol","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of ethanol fermentation","type":"exact"},{"name":"positive regulation of glucose fermentation to ethanol","type":"exact"}],"termid":"GO:2001172","terms_by_termid":{"GO:2001172":null}}


id: PBO:0034159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_chromosomal_homology_relationship_with","termid":"PBO:0034159"}


id: PBO:0041564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 85","termid":"PBO:0041564"}


id: PBO:0076309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptojanin 1","termid":"PBO:0076309"}


id: GO:0006744
data:
  {"annotated_genes":["SJAG_01672","SJAG_00721","SJAG_04568","SJAG_01043","SJAG_04642","SJAG_01820","SJAG_01865","SJAG_01866","SJAG_06603","SJAG_01668","SJAG_04000","SJAG_00933","SJAG_00459"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64191,72782,73420,74218,74455,74545,76970,79012,79495,88029,119644,119645],"is_not":false,"summary":null,"term":"GO:0006744"},{"annotations":[89514],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904775"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ubiquinone, a lipid-soluble electron-transporting coenzyme.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquinone metabolic process","termid":"GO:0006743"},{"relation_name":"is_a","term_name":"quinone biosynthetic process","termid":"GO:1901663"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00459":null,"SJAG_00721":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01668":null,"SJAG_01672":null,"SJAG_01820":null,"SJAG_01865":null,"SJAG_01866":null,"SJAG_04000":null,"SJAG_04568":null,"SJAG_04642":null,"SJAG_06603":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ubiquinone biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"PMID:29191091":null},"secondary_identifiers":["MetaCyc:UBISYN-PWY","Reactome:R-HSA-2142789"],"synonyms":[{"name":"coenzyme Q biosynthesis","type":"exact"},{"name":"coenzyme Q biosynthetic process","type":"exact"},{"name":"coenzyme Q10 biosynthesis","type":"narrow"},{"name":"coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"coenzyme Q6 biosynthesis","type":"narrow"},{"name":"coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"coenzyme Q8 biosynthesis","type":"narrow"},{"name":"coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"coenzyme Q9 biosynthesis","type":"narrow"},{"name":"coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"ubiquinone anabolism","type":"exact"},{"name":"ubiquinone biosynthesis","type":"exact"},{"name":"ubiquinone formation","type":"exact"},{"name":"ubiquinone synthesis","type":"exact"}],"termid":"GO:0006744","terms_by_termid":{"GO:0006744":null,"GO:1904775":null}}


id: PBO:0064758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase C","termid":"PBO:0064758"}


id: PBO:0080222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VIPR1 antisense RNA 1","termid":"PBO:0080222"}


id: SO:0000194
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A dispersed repeat family with many copies, each from 1 to 6 kb long. New elements are generated by retroposition of a transcribed copy. Typically the LINE contains 2 ORF's one of which is reverse transcriptase, and 3'and 5' direct repeats.","direct_ancestors":[{"relation_name":"is_a","term_name":"non_LTR_retrotransposon","termid":"SO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINE_element","synonyms":[{"name":"LINE","type":"exact"},{"name":"LINE element","type":"exact"},{"name":"Long interspersed element","type":"exact"},{"name":"Long interspersed nuclear element","type":"exact"}],"termid":"SO:0000194"}


id: PATO:0000133
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's placement which is defined by the angle between the bearer and an axis, or the angle between the bearer and another object.","definition_xrefs":["PATOC:JE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orientation","secondary_identifiers":["PATO:0000137"],"synonyms":[{"name":"amount of rotation","type":"related"},{"name":"angle","type":"related"},{"name":"angular magnitude","type":"related"},{"name":"angular placement","type":"exact"},{"name":"plane angle","type":"related"}],"termid":"PATO:0000133"}


id: GO:0072193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell in the ureter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"},{"relation_name":"part_of","term_name":"ureter smooth muscle development","termid":"GO:0072191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter smooth muscle cell differentiation","termid":"GO:0072193"}


id: PBO:0077811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 binding protein 2","termid":"PBO:0077811"}


id: MONDO:0008431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete slipped femoral capital epiphyses (obsolete MONDO:0008431)","termid":"MONDO:0008431","xrefs":{"Monarch":{"xref_id":"0008431"}}}


id: PBO:0073725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 6 pseudogene 1","termid":"PBO:0073725"}


id: MONDO:0800274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune disease, susceptibility to, 5","secondary_identifiers":["UMLS:C1969031","MEDGEN:369911"],"synonyms":[{"name":"AIS5","type":"exact"}],"termid":"MONDO:0800274","xrefs":{"Monarch":{"xref_id":"0800274"}}}


id: PBO:0068639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 20, pseudogene","termid":"PBO:0068639"}


id: PBO:0083706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-localized protein of unknown function","termid":"PBO:0083706"}


id: PBO:0062945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 3","termid":"PBO:0062945"}


id: GO:0140214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of long-chain fatty acid import into a cell.","definition_xrefs":["PMID:28178239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-chain fatty acid import into cell","termid":"GO:0140212"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid transport","termid":"GO:2000193"},{"relation_name":"positively_regulates","term_name":"long-chain fatty acid import into cell","termid":"GO:0044539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of long-chain fatty acid import into cell","termid":"GO:0140214"}


id: PBO:0005113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mcp2","termid":"PBO:0005113"}


id: GO:0070350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of white fat cell proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fat cell proliferation","termid":"GO:0070344"},{"relation_name":"regulates","term_name":"white fat cell proliferation","termid":"GO:0070343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of white fat cell proliferation","synonyms":[{"name":"regulation of white adipocyte proliferation","type":"exact"},{"name":"regulation of white adipose cell proliferation","type":"exact"}],"termid":"GO:0070350"}


id: PBO:0081387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 226","termid":"PBO:0081387"}


id: GO:0010259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An aging process that has as participant a whole multicellular organism. Multicellular organism aging includes loss of functions such as resistance to disease, homeostasis, and fertility, as well as wear and tear. Multicellular organisms aging includes processes like cellular senescence and organ senescence, but is more inclusive. May precede death (GO:0016265) of an organism and may succeed developmental maturation (GO:0021700).","definition_xrefs":["GOC:PO_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete multicellular organism aging (obsolete GO:0010259)","termid":"GO:0010259"}


id: PBO:0036309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall 1,3-beta-glucan synthase catalytic subunit Bgs2","termid":"PBO:0036309"}


id: PATO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000142 substance (obsolete PATO:0000142)","termid":"PATO:0000142"}


id: RO:0002333
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of enables","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enabled_by","termid":"RO:0002333"}


id: MONDO:0968955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta","termid":"MONDO:0019507"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypocalcified amelogenesis imperfecta","secondary_identifiers":["MEDGEN:140773","Orphanet:100032","GARD:16931","icd11.foundation:1793262466","UMLS:C0399376"],"synonyms":[{"name":"amelogenesis imperfecta type 3","type":"exact"}],"termid":"MONDO:0968955","xrefs":{"Monarch":{"xref_id":"0968955"}}}


id: PBO:0054096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1449","termid":"PBO:0054096"}


id: PBO:0072943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 22","termid":"PBO:0072943"}


id: GO:0008788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha,alpha-trehalose 6-phosphate + H2O = D-glucose + D-glucose 6-phosphate.","definition_xrefs":["EC:3.2.1.93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalase activity","termid":"GO:0015927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"alpha,alpha-phosphotrehalase activity","secondary_identifiers":["RHEA:23008","MetaCyc:TRE6PHYDRO-RXN"],"synonyms":[{"name":"alpha,alpha-trehalose-6-phosphate phosphoglucohydrolase activity","type":"related"},{"name":"phosphotrehalase activity","type":"related"},{"name":"trehalose-6-phosphate hydrolase activity","type":"related"}],"termid":"GO:0008788"}


id: PBO:0046291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelial membrane protein 1","termid":"PBO:0046291"}


id: PBO:0053148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 4","termid":"PBO:0053148"}


id: GO:1905202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of methylcrotonoyl-CoA carboxylase activity. In mammals, it is a mitochondrial complex comprising a dodecamer of 6 alpha and 6 beta subunits: MCCC-alpha has a covalently bound biotin essential for the ATP-dependent carboxylation; MCCC-beta possesses carboxyltransferase activity which presumably is essential for binding to 3-methylcrotonyl-CoA.","definition_xrefs":["PMID:22158123","GOC:bf","PMID:22869039","GOC:PARL","GOC:hjd","PMID:15868465","PMID:17360195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"methylcrotonoyl-CoA carboxylase complex","termid":"GO:1905202"}


id: PBO:0024852
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae ERO1","termid":"PBO:0024852"}


id: PBO:0111945
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP215/Dis1 family","termid":"PBO:0111945"}


id: PBO:0057903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3591","termid":"PBO:0057903"}


id: MONDO:0007831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insect Stings, hypersensitivity to","secondary_identifiers":["UMLS:C1840171","MEDGEN:327045","OMIM:147540"],"synonyms":[{"name":"insect Stings, hypersensitivity to","type":"exact"}],"termid":"MONDO:0007831","xrefs":{"Monarch":{"xref_id":"0007831"}}}


id: MONDO:0016581
data:
  {"annotated_genes":["SJAG_02730"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85677],"is_not":false,"summary":null,"term":"MONDO:0016581"},{"annotations":[86934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008542"}]},"cv_name":"mondo","definition":"Conotruncal heart malformations are a group of congenital cardiac outflow tract anomalies that include such defects as tetralogy of Fallot, pulmonary atresia with ventricular septal defect, double-outlet right ventricle (DORV), double-outlet left ventricle, truncus arteriosus and transposition of the great arteries (TGA), among others. This group of defects is frequently found in patients with 22q11.2 deletion syndrome. A deletion of chromosome 22q11.2 has equally been associated in a subset of patients with various types of isolated non-syndromic conotruncal heart malformations (with the exception of DORV and TGA where this is very uncommon).","definition_xrefs":["Orphanet:2445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02730":null},"genotype_count":0,"is_obsolete":false,"name":"conotruncal heart malformations","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1857586","ICD9:747.11","MEDGEN:341803","OMIM:217095","SCTID:218728005","GARD:8189","NANDO:2200275"],"synonyms":[{"name":"CTHM","type":"related"},{"name":"Double-outlet right ventricle","type":"related"},{"name":"Taussig-Bing syndrome or defect","type":"exact"},{"name":"conotruncal anomaly face syndrome","type":"related"},{"name":"conotruncal cardiac defects","type":"related"},{"name":"conotruncal heart malformations","type":"exact"},{"name":"conotruncal heart malformations, variable","type":"exact"},{"name":"interrupted aortic Arch","type":"related"},{"name":"persistent truncus arteriosus","type":"related"},{"name":"truncus arteriosus communis","type":"related"}],"termid":"MONDO:0016581","terms_by_termid":{"MONDO:0008542":null,"MONDO:0016581":null},"xrefs":{"Monarch":{"xref_id":"0016581"}}}


id: GO:0004988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an opioid to initiate a change in cell activity, with the pharmacological characteristics of mu-opioid receptors, including high affinity for enkephalins and beta-endorphin but low affinity for dynorphins.","definition_xrefs":["IUPHAR_RECEPTOR:319"],"gene_count":0,"genotype_count":0,"name":"obsolete mu-opioid receptor activity (obsolete GO:0004988)","secondary_identifiers":["Wikipedia:Mu_Opioid_receptor"],"synonyms":[{"name":"mu-opioid receptor activity","type":"exact"}],"termid":"GO:0004988"}


id: PBO:0056476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated tyrosine carboxypeptidase 2","termid":"PBO:0056476"}


id: PBO:0110429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VEGFC mRNA stability associated lncRNA","termid":"PBO:0110429"}


id: PBO:0076756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 6","termid":"PBO:0076756"}


id: PBO:0062430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 91 pseudogene","termid":"PBO:0062430"}


id: GO:0033171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate to drive the assembly of proteins such as Rad51p onto single-stranded (ss) DNA to form a helical nucleoprotein filament.","definition_xrefs":["GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleoprotein filament-forming ATPase activity (obsolete GO:0033171)","synonyms":[{"name":"nucleoprotein filament-forming ATPase activity","type":"exact"}],"termid":"GO:0033171"}


id: GO:0046338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylethanolamine metabolic process","termid":"GO:0046337"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylethanolamine catabolic process","synonyms":[{"name":"phosphatidylethanolamine breakdown","type":"exact"},{"name":"phosphatidylethanolamine catabolism","type":"exact"},{"name":"phosphatidylethanolamine degradation","type":"exact"}],"termid":"GO:0046338"}


id: GO:0061200
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin-sculpted lipid bilayer membrane-enclosed vesicle after clathrin release and containing gamma-aminobutyric acid transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-sculpted vesicle","termid":"GO:0060198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"clathrin-sculpted gamma-aminobutyric acid transport vesicle","synonyms":[{"name":"clathrin sculpted GABA transport vesicle","type":"exact"},{"name":"clathrin sculpted gamma-aminobutyric acid transport vesicle","type":"exact"}],"termid":"GO:0061200"}


id: GO:0090081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of canonical Wnt signaling pathway that regulates heart induction. Canonical Wnt signaling pathway involved in heart induction is the series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell, followed by relaying of the signal via beta-catenin, and ending with a change in transcription of target genes.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of heart induction by regulation of canonical Wnt signaling pathway (obsolete GO:0090081)","synonyms":[{"name":"regulation of heart induction by regulation of canonical Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of heart induction by regulation of canonical Wnt receptor signalling pathway","type":"exact"},{"name":"regulation of heart induction by regulation of canonical Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0090081"}


id: PBO:0031069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_spore","termid":"PBO:0031069"}


id: PBO:0004667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L34 (predicted)","termid":"PBO:0004667"}


id: GO:1901161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of primary amino compound.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary amino compound catabolic process","synonyms":[{"name":"primary amino compound breakdown","type":"exact"},{"name":"primary amino compound catabolism","type":"exact"},{"name":"primary amino compound degradation","type":"exact"}],"termid":"GO:1901161"}


id: PBO:0078136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 15 (pseudogene)","termid":"PBO:0078136"}


id: MONDO:0011571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dentinogenesis imperfecta type 2","termid":"MONDO:0007441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, autosomal dominant 39, with dentinogenesis imperfecta 1","secondary_identifiers":["MESH:C565316","UMLS:C1854146","OMIM:605594","GARD:15383","MEDGEN:340145"],"synonyms":[{"name":"Dfna39/Dgi1 syndrome","type":"related"},{"name":"Dfna39/dentinogenesis imperfecta 1 syndrome","type":"related"},{"name":"Dgi1/Dfna39 syndrome","type":"related"},{"name":"deafness, autosomal dominant 39, with dentinogenesis","type":"narrow"},{"name":"deafness, autosomal dominant 39, with dentinogenesis imperfecta 1","type":"exact"},{"name":"deafness, autosomal dominant 39, with dentinogenesis imperfecta type 1","type":"exact"}],"termid":"MONDO:0011571","xrefs":{"Monarch":{"xref_id":"0011571"}}}


id: GO:0070657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of a neuromast following its loss or destruction.","definition_xrefs":["GOC:dsf","PMID:19381250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanosensory epithelium regeneration","termid":"GO:0070655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast regeneration","termid":"GO:0070657"}


id: PBO:0070713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 18","termid":"PBO:0070713"}


id: MONDO:0003499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma of the skin with a prominent spindle cell component.","definition_xrefs":["NCIT:C4666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin squamous cell carcinoma","termid":"MONDO:0002529"},{"relation_name":"is_a","term_name":"keratinizing squamous cell carcinoma","termid":"MONDO:0005056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"sarcomatoid squamous cell skin carcinoma","secondary_identifiers":["MEDGEN:87611","SCTID:254653005","SCTID:403900000","NCIT:C27084","UMLS:C0349656","DOID:5536"],"synonyms":[{"name":"spindle cell (sarcomatoid) squamous cell carcinoma","type":"related"},{"name":"spindle cell (sarcomatoid) squamous cell skin carcinoma","type":"exact"},{"name":"spindle cell squamous carcinoma of skin","type":"exact"},{"name":"spindle cell squamous carcinoma of the skin","type":"exact"},{"name":"spindle cell squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0003499","xrefs":{"Monarch":{"xref_id":"0003499"}}}


id: MONDO:0021476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the tongue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"tongue neoplasm","termid":"MONDO:0021240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of tongue","secondary_identifiers":["ICD9:210.1","UMLS:C0153933","ICD10CM:D10.1","NCIT:C3592","SCTID:92443005","MEDGEN:57573","icd11.foundation:487744161"],"synonyms":[{"name":"benign neoplasm of the tongue","type":"exact"},{"name":"benign tongue neoplasm","type":"exact"},{"name":"benign tongue tumor","type":"exact"},{"name":"benign tongue tumour","type":"exact"},{"name":"benign tumor of the tongue","type":"exact"},{"name":"benign tumor of tongue","type":"exact"},{"name":"benign tumour of the tongue","type":"exact"},{"name":"benign tumour of tongue","type":"exact"},{"name":"tongue benign neoplasm","type":"exact"},{"name":"tongue neoplasm, benign","type":"exact"}],"termid":"MONDO:0021476","xrefs":{"Monarch":{"xref_id":"0021476"}}}


id: GO:0070430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 1 (NOD1) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070426"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070428"},{"relation_name":"positively_regulates","term_name":"nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","synonyms":[{"name":"positive regulation of NOD1 signaling pathway","type":"exact"},{"name":"positive regulation of nucleotide-binding oligomerization domain containing 1 signalling pathway","type":"exact"}],"termid":"GO:0070430"}


id: GO:0000128
data:
  {"annotated_genes":["SJAG_01975","SJAG_04720","SJAG_04723","SJAG_00239","SJAG_03802","SJAG_00910","SJAG_01253","SJAG_04191","SJAG_00926","SJAG_03473","SJAG_03484","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70359,76922,77357,78814],"is_not":false,"summary":null,"term":"GO:0000128"},{"annotations":[103895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036349"},{"annotations":[106613,103896],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0060257"},{"annotations":[116531,109125,111751,114469,106256,109001],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"The reversible, non-sexual aggregation of single-celled organisms in suspension to form aggregates of many cells known as flocs.","definition_xrefs":["PMID:8740415","GOC:jl","PMID:11472912","GOC:vw","PMID:21114594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"},{"relation_name":"is_a","term_name":"adhesion between unicellular organisms","termid":"GO:0098610"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00239":null,"SJAG_00910":null,"SJAG_00926":null,"SJAG_01253":null,"SJAG_01975":null,"SJAG_02380":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null,"SJAG_04720":null,"SJAG_04723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"flocculation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0043690","Wikipedia:Flocculation","GO:0032128","GO:0036281","GO:0000501","GO:0036282","GO:0043689"],"synonyms":[{"name":"cell-cell adhesion involved in flocculation","type":"exact"},{"name":"cell-cell adhesion involved in flocculation via cell wall protein-carbohydrate interaction","type":"narrow"},{"name":"co-flocculation","type":"narrow"},{"name":"coflocculation","type":"narrow"},{"name":"coflocculation via lectin-mannose interaction","type":"narrow"},{"name":"coflocculation via protein-carbohydrate interaction","type":"narrow"},{"name":"flocculation via cell wall protein-carbohydrate interaction","type":"related"},{"name":"flocculation via extracellular polymer","type":"related"}],"termid":"GO:0000128","terms_by_termid":{"GO:0000128":null,"GO:0036349":null,"GO:0060257":null,"GO:1900735":null}}


id: PBO:0031368
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_morphology_during_vegetative_growth","termid":"PBO:0031368"}


id: PBO:0117410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 5","termid":"PBO:0117410"}


id: PBO:0067012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 20, pseudogene","termid":"PBO:0067012"}


id: PBO:0057241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 432","termid":"PBO:0057241"}


id: PBO:0069275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 531, pseudogene","termid":"PBO:0069275"}


id: GO:0033009
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, vestigial nucleus found in some plastids that derive from a eukaryotic endosymbiont. Observed in chlorarachniophytes and cryptomonads, which acquired their plastids from a green and red alga respectively.","definition_xrefs":["PMID:16760254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"nucleomorph","secondary_identifiers":["Wikipedia:Nucleomorph"],"termid":"GO:0033009"}


id: MONDO:0016376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"confetti-like macular atrophy","secondary_identifiers":["GARD:20544","MEDGEN:1803272","Orphanet:221142","UMLS:C5687155"],"termid":"MONDO:0016376","xrefs":{"Monarch":{"xref_id":"0016376"}}}


id: MONDO:1010882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease in springboks. There is a buildup of GM2 gangliosides in tissues due to the lack of the enzyme hexosaminidase.","definition_xrefs":["PMID:25232033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, non-human animal","termid":"MONDO:1010167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, springbok","secondary_identifiers":["OMIA:001462-59523"],"synonyms":[{"name":"gangliosidosis, GM2, type II (Sandhoff or variant 0), springbok","type":"related"}],"termid":"MONDO:1010882","xrefs":{"Monarch":{"xref_id":"1010882"}}}


id: SO:0000824
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a macronucleus.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"macronuclear_sequence","termid":"SO:0000083"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macronuclear_chromosome","synonyms":[{"name":"macronuclear chromosome","type":"exact"}],"termid":"SO:0000824"}


id: GO:0031338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vesicle fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"regulation of vesicle fusion","termid":"GO:0031338"}


id: MONDO:0011400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the TTN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant titinopathy","termid":"MONDO:0100494"},{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426","MONDO:0005267","MONDO:0002320"],"is_obsolete":false,"name":"dilated cardiomyopathy 1G","secondary_identifiers":["DOID:0110430","UMLS:C1858763","MEDGEN:347714","MESH:C565824","OMIM:604145","GARD:15363"],"synonyms":[{"name":"CMD1G","type":"exact"},{"name":"TTN familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1G","type":"related"},{"name":"cardiomyopathy, dilated, type 1G","type":"exact"},{"name":"dilated cardiomyopathy type 1G","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in TTN","type":"exact"}],"termid":"MONDO:0011400","xrefs":{"Monarch":{"xref_id":"0011400"}}}


id: GO:1904015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a serotonin stimulus.","definition_xrefs":["PMID:1505525","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to monoamine stimulus","termid":"GO:0071868"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to serotonin","termid":"GO:1904014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to serotonin","termid":"GO:1904015"}


id: FYPO:0003001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more actin filaments than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton during vegetative growth","termid":"FYPO:0002398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"actin filaments present in increased numbers","synonyms":[{"name":"actin filaments present in greater numbers","type":"exact"},{"name":"extra actin filaments","type":"exact"},{"name":"increased level of actin filaments","type":"exact"},{"name":"increased number of actin filaments","type":"exact"}],"termid":"FYPO:0003001"}


id: GO:1901781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-cumate.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:8631713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"p-cumate metabolic process","synonyms":[{"name":"p-cumate metabolism","type":"exact"}],"termid":"GO:1901781"}


id: PBO:0051372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-31 (pseudogene)","termid":"PBO:0051372"}


id: PBO:0090306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-ribosomal factor","termid":"PBO:0090306"}


id: GO:0052683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (Z)-gamma-bisabolene + diphosphate.","definition_xrefs":["RHEA:26081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"(Z)-gamma-bisabolene synthase activity","secondary_identifiers":["EC:4.2.3.40","MetaCyc:RXN-10005"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate diphosphate-lyase [(Z)-gamma-bisabolene-forming] activity","type":"exact"}],"termid":"GO:0052683"}


id: GO:0042897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of polymyxin, any of a group of related antibiotics produced by Bacillus polymyxa and active against most Gram-negative bacteria, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"polymyxin transmembrane transporter activity","synonyms":[{"name":"polymyxin transporter activity","type":"related"}],"termid":"GO:0042897"}


id: PR:O94277
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminodeoxychorismate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.29","synonyms":[{"name":"ADC synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"P-aminobenzoic acid synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PABA synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-abz1","type":"exact"},{"name":"para-aminobenzoate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94277"}


id: MONDO:0019377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycoplasma encephalitis is a rare infectious encephalitis characterized by an acute onset of neurological signs and symptoms (e.g. altered consciousness, seizures, headaches, meningeal signs, behavioral changes) due to bacterial infection by Mycoplasma pneumoniae. Patients typically present unspecific signs and symptoms, such as fever, nausea, vomiting, fatigue, prior to onset of neurological manifestations and frequently have a history of a respiratory tract infection (e.g. pneumonia, bronchiolitis, pharyngitis).","definition_xrefs":["Orphanet:83482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious encephalitis","termid":"MONDO:0020067"},{"relation_name":"is_a","term_name":"Mycoplasmoides infection","termid":"MONDO:1030003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mycoplasma encephalitis","secondary_identifiers":["UMLS:C4707240","GARD:19040","MEDGEN:1636101"],"synonyms":[{"name":"Mycoplasma pneumoniae caused infectious encephalitis","type":"exact"},{"name":"Mycoplasma pneumoniae infectious encephalitis","type":"exact"}],"termid":"MONDO:0019377","xrefs":{"Monarch":{"xref_id":"0019377"}}}


id: PR:Q1MTR4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cti6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1MTR4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit cti6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.08","synonyms":[{"name":"Spom972h-cti6","type":"exact"}],"termid":"PR:Q1MTR4"}


id: PBO:0056266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mastermind like transcriptional coactivator 2","termid":"PBO:0056266"}


id: PBO:0083825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; phosphorylated during the cell cycle by cyclin-dependent kinases; sumoylated in an Mms21p-dependent manner; protein abundance increases in response to DNA replication stress","termid":"PBO:0083825"}


id: PBO:0049993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huntingtin interacting protein 1 related","termid":"PBO:0049993"}


id: GO:0061452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the retrotrapezoid nucleus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"retrotrapezoid nucleus development","termid":"GO:0061451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retrotrapezoid nucleus neuron differentiation","termid":"GO:0061452"}


id: MONDO:0010915
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87079,87080],"is_not":false,"summary":null,"term":"MONDO:0010915"}]},"cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the MYH14 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 4A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:322209","MESH:C563460","OMIM:600652","UMLS:C1833503","DOID:0110573","GARD:18100"],"synonyms":[{"name":"DFNA4A","type":"narrow"},{"name":"MYH14 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 4A","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 4A","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in MYH14","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 4A","type":"narrow"},{"name":"deafness, autosomal dominant 4","type":"narrow"},{"name":"deafness, autosomal dominant 4A","type":"narrow"},{"name":"deafness, autosomal dominant 4a","type":"narrow"},{"name":"deafness, autosomal dominant type 4A","type":"narrow"}],"termid":"MONDO:0010915","terms_by_termid":{"MONDO:0010915":null},"xrefs":{"Monarch":{"xref_id":"0010915"}}}


id: FYPO:0006063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septin ring assembly begins in mitotic interphase instead of during nuclear division.","definition_xrefs":["PMID:15385632","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septin ring assembly during vegetative growth","termid":"FYPO:0006061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"septin ring assembly during mitotic interphase","synonyms":[{"name":"septin ring assembly during interphase of mitotic cell cycle","type":"exact"},{"name":"septin ring assembly during mitotic interphase during vegetative growth","type":"exact"},{"name":"septin ring formation during mitotic interphase","type":"exact"}],"termid":"FYPO:0006063"}


id: GO:0045773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of axon extension.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"regulation of axon extension","termid":"GO:0030516"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of axonogenesis","termid":"GO:0050772"},{"relation_name":"positively_regulates","term_name":"axon extension","termid":"GO:0048675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axon extension","synonyms":[{"name":"activation of axon extension","type":"narrow"},{"name":"stimulation of axon extension","type":"narrow"},{"name":"up regulation of axon extension","type":"exact"},{"name":"up-regulation of axon extension","type":"exact"},{"name":"upregulation of axon extension","type":"exact"}],"termid":"GO:0045773"}


id: GO:0097324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of melanocytes from one site to another, often during the development of a multicellular organism. A melanocyte is a pigment cell derived from the neural crest. It contains melanin-filled pigment granules, which give a brown to black appearance.","definition_xrefs":["GOC:uh","PMID:22637532","CL:0000148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration","termid":"GO:0010631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melanocyte migration","termid":"GO:0097324"}


id: PBO:0065433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 1 pseudogene 6","termid":"PBO:0065433"}


id: MONDO:0015599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atopic keratoconjunctivitis is a rare and chronic allergic disease of the cornea and conjunctiva occurring in all age groups characterized by severe itching and burning sensation, conjunctival injection, photophobia and edema with serious cases leading to ulceration of the cornea which can result in blindness. It is often associated with atopic dermatitis.","definition_xrefs":["Orphanet:163934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"atopic keratoconjunctivitis","secondary_identifiers":["ICD10CM:H16.2","ICD9:370.49","GARD:20053","SCTID:403434009","UMLS:C1274788","icd11.foundation:1941631830","MEDGEN:698110","MedDRA:10069664"],"termid":"MONDO:0015599","xrefs":{"Monarch":{"xref_id":"0015599"}}}


id: PBO:0053511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 499","termid":"PBO:0053511"}


id: GO:0097375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a spinal sensory neuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A spinal sensory neuron is a sensory neuron that project to the spinal cord.","definition_xrefs":["GOC:pr","GOC:yaf","CL:0009000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory neuron axon guidance","termid":"GO:0097374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spinal sensory neuron axon guidance","termid":"GO:0097375"}


id: PBO:0109075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 16 like (pseudogene)","termid":"PBO:0109075"}


id: PBO:0054009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1339","termid":"PBO:0054009"}


id: MONDO:0005138
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the lung","direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"lung cancer","termid":"MONDO:0008903"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:3905","EFO:0001071","icd11.foundation:947165291","MEDGEN:195765","NCIT:C4878","UMLS:C0684249"],"synonyms":[{"name":"cancer of lung","type":"broad"},{"name":"cancer of the lung","type":"broad"},{"name":"carcinoma of lung","type":"exact"},{"name":"carcinoma of the lung","type":"exact"},{"name":"lung cancer","type":"broad"},{"name":"lung cancer, NOS","type":"broad"},{"name":"lung carcinoma","type":"exact"}],"termid":"MONDO:0005138","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0005138"}}}


id: GO:0102349
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tetracosanoyl-CoA + NADP = trans-2-tetracosenoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-lignocero-2-enoyl-CoA reductase activity (obsolete GO:0102349)","termid":"GO:0102349"}


id: GO:0031308
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of nuclear outer membrane (obsolete GO:0031308)","synonyms":[{"name":"intrinsic to nuclear outer membrane","type":"narrow"}],"termid":"GO:0031308"}


id: PBO:0067692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal N4","termid":"PBO:0067692"}


id: GO:0003282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the ventricular septum intermedium over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septum development","termid":"GO:0003281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular septum intermedium development","termid":"GO:0003282"}


id: SO:0000707
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The 5' five prime splice site region of the donor RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans_splice_site","termid":"SO:0001420"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_splice_donor_site","synonyms":[{"name":"5 prime trans splice site","type":"related"},{"name":"trans splice donor site","type":"exact"},{"name":"trans-splice donor site","type":"exact"}],"termid":"SO:0000707"}


id: GO:1903347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tight junction assembly.","definition_xrefs":["GO_REF:0000058","GOC:jz","PMID:25050009","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell junction assembly","termid":"GO:1901889"},{"relation_name":"is_a","term_name":"regulation of bicellular tight junction assembly","termid":"GO:2000810"},{"relation_name":"negatively_regulates","term_name":"bicellular tight junction assembly","termid":"GO:0070830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of bicellular tight junction assembly","synonyms":[{"name":"down regulation of tight junction assembly","type":"exact"},{"name":"down regulation of tight junction formation","type":"exact"},{"name":"down-regulation of tight junction assembly","type":"exact"},{"name":"down-regulation of tight junction formation","type":"exact"},{"name":"downregulation of tight junction assembly","type":"exact"},{"name":"downregulation of tight junction formation","type":"exact"},{"name":"inhibition of tight junction assembly","type":"narrow"},{"name":"inhibition of tight junction formation","type":"narrow"},{"name":"negative regulation of tight junction formation","type":"exact"}],"termid":"GO:1903347"}


id: GO:0016861
data:
  {"annotated_genes":["SJAG_00070","SJAG_01455","SJAG_02648","SJAG_00839","SJAG_03614","SJAG_01346","SJAG_04192"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003949"},{"annotations":[70482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004347"},{"annotations":[78347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004476"},{"annotations":[79564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004640"},{"annotations":[74877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004751"},{"annotations":[77259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046523"},{"annotations":[72472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004807"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor, which is an aldose or a ketose, are the same molecule, and no oxidized product appears.","definition_xrefs":["GOC:jl","EC:5.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00839":null,"SJAG_01346":null,"SJAG_01455":null,"SJAG_02648":null,"SJAG_03614":null,"SJAG_04192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"intramolecular isomerase activity, interconverting aldoses and ketoses","type":"exact"}],"termid":"GO:0016861","terms_by_termid":{"GO:0003949":null,"GO:0004347":null,"GO:0004476":null,"GO:0004640":null,"GO:0004751":null,"GO:0004807":null,"GO:0046523":null}}


id: PBO:0056179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAF bZIP transcription factor B","termid":"PBO:0056179"}


id: PBO:0051112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-68 (pseudogene)","termid":"PBO:0051112"}


id: PBO:0002569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neddylation pathway protein But1","termid":"PBO:0002569"}


id: PR:Q10452
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gsk3 gene.","definition_xrefs":["UniProtKB:Q10452","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase gsk3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.15","synonyms":[{"name":"Spom972h-gsk3","type":"exact"},{"name":"protein kinase skp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10452"}


id: GO:0045874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the sevenless signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of sevenless signaling pathway","termid":"GO:0045501"},{"relation_name":"positively_regulates","term_name":"sevenless signaling pathway","termid":"GO:0045500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sevenless signaling pathway","synonyms":[{"name":"activation of sevenless signaling pathway","type":"narrow"},{"name":"positive regulation of sev signaling pathway","type":"exact"},{"name":"positive regulation of sevenless signalling pathway","type":"exact"},{"name":"stimulation of sevenless signaling pathway","type":"narrow"},{"name":"up regulation of sevenless signaling pathway","type":"exact"},{"name":"up-regulation of sevenless signaling pathway","type":"exact"},{"name":"upregulation of sevenless signaling pathway","type":"exact"}],"termid":"GO:0045874"}


id: PBO:0064195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A and acyltransferase 3","termid":"PBO:0064195"}


id: PBO:0087061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L2B; homologous to mammalian ribosomal protein L2 and bacterial L2; RPL2B has a paralog, RPL2A, that arose from the whole genome duplication; expression is upregulated at low temperatures","termid":"PBO:0087061"}


id: _global:integral_part_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X integral_part_of Y if and only if: X part_of Y and Y has_part X.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral_part_of","termid":"_global:integral_part_of"}


id: PBO:0043449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 10","termid":"PBO:0043449"}


id: MONDO:0014612
data:
  {"annotated_genes":["SJAG_01836"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85625],"is_not":false,"summary":null,"term":"MONDO:0014612"}]},"cv_name":"mondo","definition":"Any pulmonary fibrosis and/or bone marrow failure, Telomere-related in which the cause of the disease is a mutation in the PARN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete idiopathic pulmonary fibrosis (obsolete MONDO:0008345)","termid":"MONDO:0008345"},{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01836":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:903928","UMLS:C4225347","OMIM:616371","GARD:16097"],"synonyms":[{"name":"PARN pulmonary fibrosis and/or bone marrow failure, Telomere-related","type":"exact"},{"name":"PFBMFT4","type":"related"},{"name":"pulmonary fibrosis and/or bone marrow failure, TELOMERE-RELATED, 4","type":"related"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related caused by mutation in PARN","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 4","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, type 4","type":"exact"}],"termid":"MONDO:0014612","terms_by_termid":{"MONDO:0014612":null},"xrefs":{"Monarch":{"xref_id":"0014612"}}}


id: PBO:0031200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_occurrence_of_normal_mitotic_cell_cycle_arrest","termid":"PBO:0031200"}


id: RO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"X outer_layer_of Y iff:\\n. X :continuant that bearer_of some PATO:laminar\\n. X part_of Y\\n. exists Z :surface\\n. X has_boundary Z\\n. Z boundary_of Y\\n\\nhas_boundary: http://purl.obolibrary.org/obo/RO_0002002\\nboundary_of: http://purl.obolibrary.org/obo/RO_0002000","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bounding_layer_of","termid":"RO:0002007"}


id: PBO:0088607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Der1-like (degradation in the ER) family","termid":"PBO:0088607"}


id: PBO:0027302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_mercury_ion","termid":"PBO:0027302"}


id: GO:0070370
data:
  {"annotated_genes":["SJAG_04187","SJAG_03527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79392,104663],"is_not":false,"summary":null,"term":"GO:0070370"}]},"cv_name":"biological_process","definition":"Any process that increases heat tolerance of a cell in response to high temperatures.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat acclimation","termid":"GO:0010286"},{"relation_name":"is_a","term_name":"cellular response to heat","termid":"GO:0034605"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03527":null,"SJAG_04187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular heat acclimation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular thermotolerance","type":"exact"}],"termid":"GO:0070370","terms_by_termid":{"GO:0070370":null}}


id: PBO:0001603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C Ptc4","termid":"PBO:0001603"}


id: GO:0046564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + oxalate = CO2 + formate.","definition_xrefs":["RHEA:16509","EC:4.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"oxalate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R00522","MetaCyc:OXALATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"oxalate carboxy-lyase (formate-forming)","type":"related"},{"name":"oxalate carboxy-lyase activity","type":"related"}],"termid":"GO:0046564"}


id: MONDO:0014111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the LIM2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 19 multiple types","secondary_identifiers":["OMIM:615277","MEDGEN:815334","UMLS:C3809004","DOID:0110263"],"synonyms":[{"name":"CTRCT19","type":"exact"},{"name":"LIM2 early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 19","type":"related"},{"name":"cataract 19, multiple types","type":"related"},{"name":"cataract type 19","type":"exact"},{"name":"early-onset non-syndromic cataract caused by mutation in LIM2","type":"exact"}],"termid":"MONDO:0014111","xrefs":{"Monarch":{"xref_id":"0014111"}}}


id: PR:Q9USW2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- inp2 gene.","definition_xrefs":["UniProtKB:Q9USW2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inheritance of peroxisomes protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.06c","synonyms":[{"name":"Spom972h-inp2","type":"exact"}],"termid":"PR:Q9USW2"}


id: FYPO:0002106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, but the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"is_a","term_name":"stubby vegetative cell","termid":"FYPO:0000024"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"},{"relation_name":"is_a","term_name":"viable vegetative cell with increased cell diameter","termid":"FYPO:0006616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"viable stubby vegetative cell","synonyms":[{"name":"stubby viable cell during vegetative growth","type":"exact"},{"name":"stubby viable vegetative cell","type":"exact"},{"name":"viable stubby vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable watermelon-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0002106"}


id: GO:0018825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: triethanolamine = diethanolamine + acetaldehyde.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete triethanolamine lyase activity (obsolete GO:0018825)","termid":"GO:0018825"}


id: PBO:0045171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 5","termid":"PBO:0045171"}


id: MONDO:0001692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent sexual urges, fantasies, or behaviors involving sexual activity with a prepubescent child or children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraphilic disorder","termid":"MONDO:0000596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pedophilia","secondary_identifiers":["ICD9:302.2","ICD10CM:F65.4","UMLS:C0030764","MEDGEN:18340","MESH:D010378","DOID:13351","SCTID:84002002","NCIT:C94355"],"synonyms":[{"name":"Paedophilia","type":"exact"}],"termid":"MONDO:0001692","xrefs":{"Monarch":{"xref_id":"0001692"}}}


id: PBO:0084318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin; a carrier protein involved in nuclear import of proteins; importin beta homolog","termid":"PBO:0084318"}


id: MONDO:0017723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Sandhoff disease that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sandhoff disease","termid":"MONDO:0010006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0002525","MONDO:0005559","MONDO:0002039","MONDO:0002561","MONDO:0005244"],"is_obsolete":false,"name":"Sandhoff disease, adult form","secondary_identifiers":["MEDGEN:148319","GARD:17405","SCTID:238020001","Orphanet:309169","UMLS:C0751489"],"synonyms":[{"name":"Hexosaminidases A and B deficiency, adult form","type":"exact"},{"name":"Sandhoff disease of adults","type":"exact"},{"name":"adult GM2 gangliosidosis 0 variant","type":"exact"},{"name":"adult Sandhoff disease","type":"exact"}],"termid":"MONDO:0017723","xrefs":{"Monarch":{"xref_id":"0017723"}}}


id: MONDO:0010415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reducing body myopathy","termid":"MONDO:0019948"},{"relation_name":"is_a","term_name":"FHL1-related myopathy","termid":"MONDO:0800462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, reducing body, X-linked, childhood-onset","secondary_identifiers":["MESH:C567468","DOID:0080687","OMIM:300718","UMLS:C4225159","MEDGEN:904593","GARD:15262"],"synonyms":[{"name":"RBMX1B","type":"related"},{"name":"myopathy, reducing body, X-linked, childhood-onset","type":"exact"},{"name":"reducing body myopathy, X-linked 1B, with late childhood or adult onset","type":"related"}],"termid":"MONDO:0010415","xrefs":{"Monarch":{"xref_id":"0010415"}}}


id: PBO:0088645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen54","termid":"PBO:0088645"}


id: PBO:0054393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1789","termid":"PBO:0054393"}


id: PBO:0060713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 10","termid":"PBO:0060713"}


id: GO:1905933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell fate determination.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25793578","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell fate determination","termid":"GO:1905933"}


id: PR:Q9Y7I3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6C3.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7I3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6C3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.03c","synonyms":[{"name":"Spom972h-SPAC6C3.03c","type":"exact"}],"termid":"PR:Q9Y7I3"}


id: PBO:0086905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ubiquitin-specific protease; concentrates at the bud neck; UBP5 has a paralog, DOA4, that arose from the whole genome duplication","termid":"PBO:0086905"}


id: GO:0070013
data:
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id: GO:0050110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions : D-galactosyl-3-(N-acetyl-beta-D-galactosaminyl)-L-serine + H2O = D-galactosyl-3-N-acetyl-beta-D-galactosamine + L-serine and D-galactosyl-3-(N-acetyl-beta-D-galactosaminyl)-L-threonyl + H2O = D-galactosyl-3-N-acetyl-beta-D-galactosamine + L-threonyl.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete endo-alpha-N-acetylgalactosaminidase activity (obsolete GO:0050110)","termid":"GO:0050110"}


id: MONDO:0012695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Meckel syndrome in which the cause of the disease is a mutation in the RPGRIP1L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel syndrome, type 5","secondary_identifiers":["MEDGEN:409740","UMLS:C1969052","OMIM:611561","MESH:C566915","DOID:0070119","GARD:15520"],"synonyms":[{"name":"MKS5","type":"exact"},{"name":"Meckel syndrome 5","type":"related"},{"name":"Meckel syndrome caused by mutation in RPGRIP1L","type":"exact"},{"name":"Meckel syndrome, type 5","type":"exact"},{"name":"Meckel-Gruber syndrome, type 5","type":"exact"},{"name":"RPGRIP1L Meckel syndrome","type":"exact"}],"termid":"MONDO:0012695","xrefs":{"Monarch":{"xref_id":"0012695"}}}


id: PBO:0002225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis CGR1 family (predicted)","termid":"PBO:0002225"}


id: PBO:0076488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARDBP pseudogene 3","termid":"PBO:0076488"}


id: PBO:0067577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 734, pseudogene","termid":"PBO:0067577"}


id: PBO:0054706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2115","termid":"PBO:0054706"}


id: GO:0047605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxy-2-methyl-3-oxobutanoate = (R)-2-acetoin + CO2.","definition_xrefs":["EC:4.1.1.5","MetaCyc:ACETOLACTATE-DECARBOXYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetolactate decarboxylase activity","secondary_identifiers":["RHEA:21580"],"synonyms":[{"name":"(S)-2-hydroxy-2-methyl-3-oxobutanoate carboxy-lyase [(R)-2-acetoin-forming]","type":"related"},{"name":"(S)-2-hydroxy-2-methyl-3-oxobutanoate carboxy-lyase activity","type":"related"},{"name":"alpha-acetolactate decarboxylase activity","type":"related"}],"termid":"GO:0047605"}


id: SO:0001869
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A candidate gene whose function has something in common biologically with the trait under investigation.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidate_gene","termid":"SO:0001867"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional_candidate_gene","synonyms":[{"name":"functional candidate gene","type":"exact"},{"name":"functional target gene","type":"exact"}],"termid":"SO:0001869"}


id: PBO:0114350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasme amembrane amino acid transmembrane transporter Nrg1","termid":"PBO:0114350"}


id: MONDO:0958176
data:
  {"annotated_genes":["SJAG_04601"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85955],"is_not":false,"summary":null,"term":"MONDO:0958176"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculopharyngeal muscular dystrophy","termid":"MONDO:0008116"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"oculopharyngeal muscular dystrophy 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:164300","NCIT:C84942"],"termid":"MONDO:0958176","terms_by_termid":{"MONDO:0958176":null},"xrefs":{"Monarch":{"xref_id":"0958176"}}}


id: PBO:0065397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 2 pseudogene 3","termid":"PBO:0065397"}


id: PBO:0050846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ICA1 antisense RNA 1","termid":"PBO:0050846"}


id: MONDO:0002719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the conus medullaris.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal cord cancer","termid":"MONDO:0003544"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conus medullaris neoplasm","secondary_identifiers":["UMLS:C1333153","DOID:3641","NCIT:C5443","MEDGEN:232392"],"synonyms":[{"name":"conus medullaris neoplasm","type":"exact"},{"name":"conus medullaris neoplasm (disease)","type":"exact"},{"name":"conus medullaris tumor","type":"exact"},{"name":"conus medullaris tumour","type":"exact"},{"name":"neoplasm of conus medullaris","type":"exact"},{"name":"neoplasm of the conus medullaris","type":"exact"},{"name":"tumor of conus medullaris","type":"exact"},{"name":"tumor of the conus medullaris","type":"exact"},{"name":"tumour of conus medullaris","type":"exact"},{"name":"tumour of the conus medullaris","type":"exact"}],"termid":"MONDO:0002719","xrefs":{"Monarch":{"xref_id":"0002719"}}}


id: PBO:0028164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_mycophenolic_acid","termid":"PBO:0028164"}


id: GO:0031432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to titin, any of a family of giant proteins found in striated and smooth muscle. In striated muscle, single titin molecules span half the sarcomere, with their N- and C-termini in the Z-disc and M-line, respectively.","definition_xrefs":["GOC:mah","PMID:10481174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0008092","GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"titin binding","termid":"GO:0031432"}


id: FYPO:0007082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the lengthening of the distance between poles of the meiotic spindle that occurs as part of the second meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000257","FYPO:0005447","FYPO:0000054","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"normal spindle elongation in meiosis II","synonyms":[{"name":"normal meiotic spindle elongation in meiosis II","type":"exact"},{"name":"normal meiotic spindle elongation in second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007082"}


id: GO:0006292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The location of pyrimidine dimers by a large multienzyme complex that scans the DNA for distortions in the double helix caused by pyrimidine dimers.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrimidine-dimer repair, DNA damage recognition (obsolete GO:0006292)","synonyms":[{"name":"pyrimidine-dimer repair, DNA damage recognition","type":"exact"}],"termid":"GO:0006292"}


id: GO:0005479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete vacuolar assembly (obsolete GO:0005479)","synonyms":[{"name":"vacuolar assembly","type":"exact"}],"termid":"GO:0005479"}


id: PR:Q10410
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TOM1-like protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00244","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor-binding protein C1F3.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.05","secondary_identifiers":["UniProtKB:Q10410"],"synonyms":[{"name":"Spom972h-TOM1L2","type":"exact"}],"termid":"PR:Q10410"}


id: MONDO:1011263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myopia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopia, non-human animal","termid":"MONDO:1010337"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopia, dog","secondary_identifiers":["OMIA:001487-9615"],"termid":"MONDO:1011263","xrefs":{"Monarch":{"xref_id":"1011263"}}}


id: PBO:0045365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPH1 antisense RNA 1","termid":"PBO:0045365"}


id: GO:0048521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli.","definition_xrefs":["GOC:pr","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of behavior","synonyms":[{"name":"down regulation of behavior","type":"exact"},{"name":"down-regulation of behavior","type":"exact"},{"name":"downregulation of behavior","type":"exact"},{"name":"inhibition of behavior","type":"narrow"}],"termid":"GO:0048521"}


id: PR:Q10087
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C11D3.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.08c","synonyms":[{"name":"Spom972h-SPAC11D3.08c","type":"exact"}],"termid":"PR:Q10087"}


id: PBO:0074868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 52","termid":"PBO:0074868"}


id: GO:0010992
data:
  {"annotated_genes":["SJAG_00312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72663],"is_not":false,"summary":null,"term":"GO:0010992"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of ubiquitin monomers and free ubiquitin chains at the level of the cell by recycling ubiquitin from proteasome-bound ubiquitinated intermediates.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph","PMID:19410548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ubiquitin recycling","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0010993"],"synonyms":[{"name":"regulation of ubiquitin homeostasis","type":"narrow"},{"name":"ubiquitin homeostasis","type":"related"}],"termid":"GO:0010992","terms_by_termid":{"GO:0010992":null}}


id: MONDO:0022800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease or disorder in which the cause of the disease is a mutation in the COL2A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"collagenopathy","termid":"MONDO:0004603"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 collagenopathy","secondary_identifiers":["UMLS:C2931073","GARD:19186","HGNC:2200","MEDGEN:419326","MESH:C535964","NANDO:2201016","Orphanet:93421"],"synonyms":[{"name":"COL2A1","type":"related"},{"name":"COL2A1 disease or disorder","type":"exact"},{"name":"cartilage collagen","type":"related"},{"name":"collagen II","type":"related"},{"name":"collagenopathy type 2 alpha 1","type":"exact"},{"name":"disease or disorder caused by mutation in COL2A1","type":"exact"}],"termid":"MONDO:0022800","xrefs":{"Monarch":{"xref_id":"0022800"}}}


id: PBO:0075507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPC25 component of NDC80 kinetochore complex","termid":"PBO:0075507"}


id: PBO:0088501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial acylpyruvase Oaa1","termid":"PBO:0088501"}


id: PBO:0015705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial acylglycerol lipase (predicted)","termid":"PBO:0015705"}


id: MONDO:0043085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 1 disorder","termid":"MONDO:0700008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1, uniparental disomy 1q12 q21","secondary_identifiers":["GARD:1878","MEDGEN:419882","MESH:C538085","UMLS:C2931726"],"synonyms":[{"name":"Mosaic trisomy 1q12 q21","type":"related"},{"name":"uniparental disomy 1q12 q21","type":"related"}],"termid":"MONDO:0043085","xrefs":{"Monarch":{"xref_id":"0043085"}}}


id: PBO:0027107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus,_with_protein_mislocalized_to_cytoplasmic_foci","termid":"PBO:0027107"}


id: GO:0051790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a short-chain fatty acid. A short-chain fatty acid has an aliphatic tail containing fewer than 6 carbons.","definition_xrefs":["Wikipedia:Fatty_acid_metabolism"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"short-chain fatty acid biosynthetic process","synonyms":[{"name":"short chain fatty acid biosynthesis","type":"exact"},{"name":"short chain fatty acid biosynthetic process","type":"exact"},{"name":"short-chain fatty acid anabolism","type":"exact"},{"name":"short-chain fatty acid biosynthesis","type":"exact"},{"name":"short-chain fatty acid formation","type":"exact"},{"name":"short-chain fatty acid synthesis","type":"exact"}],"termid":"GO:0051790"}


id: PR:Q09711
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A neuronal calcium sensor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23055:SF22","OMA:SCHPO00114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium-binding protein NCS-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.04","secondary_identifiers":["UniProtKB:Q09711"],"synonyms":[{"name":"Spom972h-NCS1","type":"exact"}],"termid":"PR:Q09711"}


id: GO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about a lack of oxygen are received and are converted to a molecular signal by chemoreceptors in the carotid bodies and the aortic bodies.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by chemoreceptor signaling","termid":"GO:0001979"},{"relation_name":"part_of","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hypoxic conditions in blood by chemoreceptor signaling","synonyms":[{"name":"detection of hypoxic conditions in blood by chemoreceptor signalling","type":"exact"}],"termid":"GO:0002007"}


id: PBO:0114383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane cysteine transmembrane transporter","termid":"PBO:0114383"}


id: FYPO:0006969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of cytidine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular cytidine level","synonyms":[{"name":"decreased cellular cytidine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular cytidine level during vegetative growth","type":"exact"},{"name":"reduced cellular cytidine level","type":"exact"}],"termid":"FYPO:0006969"}


id: GO:0052806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sulfite + 3 1,5-dihydrocoenzyme F420 = hydrogen sulfide + 3 H2O + 3 coenzyme F420. 1,5-dihydrocoenzyme F420 is also known as reduced coenzyme F420.","definition_xrefs":["GOC:mengo_curators","PMID:16048999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfite reductase (coenzyme F420) activity","synonyms":[{"name":"coenzyme F420-dependent sulfite reductase activity","type":"exact"},{"name":"coenzyme F420-sulfite reductase activity","type":"exact"},{"name":"hydrogen-sulfide:coenzyme F420 oxidoreductase activity","type":"exact"},{"name":"sulfite:reduced coenzyme F420 reductase activity","type":"exact"}],"termid":"GO:0052806"}


id: GO:0031638
data:
  {"annotated_genes":["SJAG_01868","SJAG_04785","SJAG_02432"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87797,92151,97968],"is_not":false,"summary":null,"term":"GO:0031638"}]},"cv_name":"biological_process","definition":"The proteolytic processing of an inactive enzyme to an active form.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01868":null,"SJAG_02432":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"zymogen activation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"zymogen activation by proteolytic cleavage","type":"exact"}],"termid":"GO:0031638","terms_by_termid":{"GO:0031638":null}}


id: PBO:0052475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 1","termid":"PBO:0052475"}


id: PBO:0066272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member F","termid":"PBO:0066272"}


id: PBO:0064959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 11","termid":"PBO:0064959"}


id: PR:O42706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L21-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.08","synonyms":[{"name":"Spom972h-rpl2102","type":"exact"}],"termid":"PR:O42706"}


id: PBO:0075947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 2 (pseudogene)","termid":"PBO:0075947"}


id: GO:1900835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of emericellin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900184"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of emericellin biosynthetic process","termid":"GO:1900834"},{"relation_name":"negatively_regulates","term_name":"emericellin biosynthetic process","termid":"GO:1900766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of emericellin biosynthetic process","synonyms":[{"name":"down regulation of emericellin biosynthetic process","type":"exact"},{"name":"down-regulation of emericellin biosynthetic process","type":"exact"},{"name":"downregulation of emericellin biosynthetic process","type":"exact"}],"termid":"GO:1900835"}


id: MONDO:1012367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"protein-losing nephropathy, non-human animal","termid":"MONDO:1011914"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-losing nephropathy, dog","secondary_identifiers":["OMIA:001326-9615"],"termid":"MONDO:1012367","xrefs":{"Monarch":{"xref_id":"1012367"}}}


id: PBO:0048761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMCL1 pseudogene 2","termid":"PBO:0048761"}


id: MONDO:0023152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibrocartilaginous embolism (FCE) is a rare type of embolism (sudden blocking of an artery) that occurs in the spinal cord. FCE occurs when materials that are usually found within the vertebral disk of the spine enter into the nearby vascular system (veins and arteries) and block one of the spinal cord vessels. The signs and symptoms of FCE often develop after a minor or even unnoticed btriggering eventb such as lifting, straining, or falling. Symptoms of FCE may include neck and/or back pain, progressive muscle weakness, and paralysis.The exact underlying cause of FCE is poorly understood. Most cases occur sporadically in people with no family history of the disease. Diagnosis is based on imaging of the spinal cord and ruling out other causes of a blockage of the vascular system within the spinal cord. Treatment is generally focused on preventing possible complications and improving quality of life with medications and physical therapy.","definition_xrefs":["GARD:0009718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrocartilaginous embolism","secondary_identifiers":["MEDGEN:419466","MESH:C537927","UMLS:C2931666"],"synonyms":[{"name":"embolism, fibrocartilaginous","type":"related"}],"termid":"MONDO:0023152","xrefs":{"Monarch":{"xref_id":"0023152"}}}


id: MOD:00917
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-threonine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-threonine residue","synonyms":[{"name":"ModThr","type":"exact"}],"termid":"MOD:00917"}


id: MONDO:0003133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the glomeruli with infiltration by polymorphonuclear leukocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"exudative glomerulonephritis","secondary_identifiers":["UMLS:C0546345","MEDGEN:154269","NCIT:C35706","DOID:4777"],"termid":"MONDO:0003133","xrefs":{"Monarch":{"xref_id":"0003133"}}}


id: GO:0018252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the green fluorescent protein chromophore cross-link from the alpha-carboxyl carbon of residue n, a serine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons.","definition_xrefs":["RESID:AA0184"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-seryl-5-imidazolinone glycine (obsolete GO:0018252)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via L-seryl-5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via L-seryl-5-imidazolinone glycine","type":"exact"}],"termid":"GO:0018252"}


id: FYPO:0006836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to magnesium chloride. Cells stop growing (and may die) at a concentration of magnesium chloride that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to magnesium chloride","synonyms":[{"name":"hypersensitive to magnesium chloride","type":"exact"},{"name":"sensitive to MgCl2","type":"exact"},{"name":"sensitive to magnesium chloride during mitotic cell cycle","type":"related"},{"name":"sensitive to magnesium chloride during vegetative growth","type":"exact"}],"termid":"FYPO:0006836"}


id: MONDO:0009395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperostosis corticalis generalisata, also known as van Buchem disease, is a rare craniotubular hyperostosis characterized by hyperostosis of the skull, mandible, clavicles, ribs and diaphyses of the long bones, as well as the tubular bones of the hands and feet. Clinical manifestations include increased skull thickness with cranial nerve entrapment causing inconsistent cranial nerve palsies.","definition_xrefs":["Orphanet:3416"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"hyperostosis","termid":"MONDO:0002185"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperostosis corticalis generalisata","secondary_identifiers":["GARD:2833","MEDGEN:98484","NCIT:C131812","UMLS:C0432272","OMIM:239100","DOID:0080036","icd11.foundation:241514592","SCTID:59763006"],"synonyms":[{"name":"SOST-related sclerosing bone dysplasia","type":"related"},{"name":"VAN Buchem disease","type":"related"},{"name":"VBCH","type":"related"},{"name":"Van Buchem disease","type":"exact"},{"name":"endosteal hyperostosis","type":"exact"},{"name":"endosteal hyperostosis autosomal recessive","type":"related"},{"name":"endosteal hyperostosis, autosomal recessive","type":"related"},{"name":"hyperostosis corticalis generalisata","type":"exact"},{"name":"hyperphosphatasemia tarda","type":"exact"},{"name":"van Buchem disease","type":"exact"},{"name":"van Buchem disease type 1","type":"exact"}],"termid":"MONDO:0009395","xrefs":{"Monarch":{"xref_id":"0009395"}}}


id: PBO:0017794
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CDC14A","termid":"PBO:0017794"}


id: PBO:0060141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTOR antisense RNA 1","termid":"PBO:0060141"}


id: GO:1904815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to chromosome, telomeric region.","definition_xrefs":["GO_REF:0000058","PMID:19487455","GOC:BHF","GOC:TermGenie","GOC:BHF_telomere","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to chromosome, telomeric region","termid":"GO:1904814"},{"relation_name":"negatively_regulates","term_name":"protein localization to chromosome, telomeric region","termid":"GO:0070198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to chromosome, telomeric region","synonyms":[{"name":"down regulation of protein localisation to chromosome, telomeric region","type":"exact"},{"name":"down regulation of protein localization to chromosome, telomeric region","type":"exact"},{"name":"down regulation of protein localization to telomere","type":"exact"},{"name":"down-regulation of protein localisation to chromosome, telomeric region","type":"exact"},{"name":"down-regulation of protein localization to chromosome, telomeric region","type":"exact"},{"name":"down-regulation of protein localization to telomere","type":"exact"},{"name":"downregulation of protein localisation to chromosome, telomeric region","type":"exact"},{"name":"downregulation of protein localization to chromosome, telomeric region","type":"exact"},{"name":"downregulation of protein localization to telomere","type":"exact"},{"name":"inhibition of protein localisation to chromosome, telomeric region","type":"narrow"},{"name":"inhibition of protein localization to chromosome, telomeric region","type":"narrow"},{"name":"inhibition of protein localization to telomere","type":"narrow"},{"name":"negative regulation of protein localisation to chromosome, telomeric region","type":"exact"},{"name":"negative regulation of protein localization to telomere","type":"exact"}],"termid":"GO:1904815"}


id: GO:2000100
data:
  {"annotated_genes":["SJAG_00661","SJAG_00845","SJAG_01799","SJAG_03581","SJAG_04461","SJAG_00236","SJAG_02022","SJAG_00333","SJAG_03637","SJAG_00596"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91467,94917,95993,104882,113430,119189],"is_not":false,"summary":null,"term":"GO:2000100"},{"annotations":[105712,94070,100515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[104043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061361"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment or maintenance of bipolar cell polarity regulating cell shape.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of bipolar cell polarity","termid":"GO:2000099"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000769"},{"relation_name":"regulates","term_name":"establishment or maintenance of bipolar cell polarity regulating cell shape","termid":"GO:0061246"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of establishment or maintenance of bipolar cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000100","terms_by_termid":{"GO:0061361":null,"GO:2000100":null,"GO:2000247":null}}


id: PBO:0027945
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_with_fragmented_septum_and_more_than_four_nuclei","termid":"PBO:0027945"}


id: GO:0003856
data:
  {"annotated_genes":["SJAG_00337"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60151],"is_not":false,"summary":null,"term":"GO:0003856"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate = 3-dehydroquinate + phosphate.","definition_xrefs":["RHEA:21968","EC:4.2.3.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00337":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"3-dehydroquinate synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R03083","MetaCyc:3-DEHYDROQUINATE-SYNTHASE-RXN"],"termid":"GO:0003856","terms_by_termid":{"GO:0003856":null}}


id: SO:0000663
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a transfer RNA (tRNA).","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_encoding","synonyms":[{"name":"tRNA encoding","type":"exact"}],"termid":"SO:0000663"}


id: GO:0071441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of an acetyl group to histone H3 at position 14 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K14 acetylation (obsolete GO:0071441)","synonyms":[{"name":"down regulation of histone H3-K14 acetylation","type":"exact"},{"name":"down-regulation of histone H3-K14 acetylation","type":"exact"},{"name":"downregulation of histone H3-K14 acetylation","type":"exact"},{"name":"inhibition of histone H3-K14 acetylation","type":"narrow"},{"name":"negative regulation of histone H3 acetylation at K14","type":"exact"},{"name":"negative regulation of histone H3K14 acetylation","type":"exact"}],"termid":"GO:0071441"}


id: GO:0048713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oligodendrocyte differentiation.","definition_xrefs":["PMID:15139015","GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell differentiation","termid":"GO:0045685"},{"relation_name":"regulates","term_name":"oligodendrocyte differentiation","termid":"GO:0048709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oligodendrocyte differentiation","termid":"GO:0048713"}


id: PBO:0051312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-6 (pseudogene)","termid":"PBO:0051312"}


id: PBO:0058099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4315-1","termid":"PBO:0058099"}


id: GO:0033505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the floor plate is generated and organized.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"floor plate development","termid":"GO:0033504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floor plate morphogenesis","termid":"GO:0033505"}


id: PBO:0070193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 115 pseudogene","termid":"PBO:0070193"}


id: FYPO:0000138
data:
  {"alleles_by_uniquename":{"SJAG_00370:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00370","name":"erg1delta","uniquename":"SJAG_00370:allele-1"},"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 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id: GO:0106243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9alpha-copalyl diphosphate = diphosphate + syn-isopimara-7,15-diene.","definition_xrefs":["PMID:29315936","GOC:emb","RHEA:62188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"syn-isopimara-7,15-diene synthase activity","termid":"GO:0106243"}


id: GO:1905525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. 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formation by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"regulation of ferrichrome synthesis by negative regulation of transcription from Pol II promoter in response to iron","type":"exact"},{"name":"regulation of ferrichrome synthesis by negative regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"}],"termid":"GO:1905525"}


id: PBO:0029672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-angled_actomyosin_contractile_ring","termid":"PBO:0029672"}


id: GO:0044551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism initiates, promotes, or enhances the widening of blood vessels by small muscles in their walls in another organism via the action of a venom, concomittantly reducing blood pressure in the bitten/stung organism.","definition_xrefs":["GOC:jl","GOC:ecd","PMID:21050868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of blood circulation","termid":"GO:0140134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated vasodilation","synonyms":[{"name":"envenomation resulting in modulation of vasodilation in other organism","type":"related"},{"name":"envenomation resulting in regulation of vasodilation in other organism","type":"related"},{"name":"envenomation resulting in vasodilation in another organism","type":"exact"},{"name":"envenomation resulting in vasodilation in other organism","type":"exact"},{"name":"venom-mediated vasorelaxation","type":"exact"}],"termid":"GO:0044551"}


id: GO:0072068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the late distal convoluted tubule over time, from its formation to the mature structure. The late distal convoluted tubule contains DCT cells and intercalated (IC) alpha and beta cells and is vasopressin-sensitive.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron epithelium development","termid":"GO:0072009"},{"relation_name":"part_of","term_name":"distal convoluted tubule development","termid":"GO:0072025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"late distal convoluted tubule development","termid":"GO:0072068"}


id: GO:0009708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of benzyl isoquinoline alkaloids, compounds with bicyclic N-containing aromatic rings.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid biosynthetic process","termid":"GO:0033075"},{"relation_name":"is_a","term_name":"benzyl isoquinoline alkaloid metabolic process","termid":"GO:0046445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"benzyl isoquinoline alkaloid biosynthetic process","synonyms":[{"name":"benzyl isoquinoline alkaloid anabolism","type":"exact"},{"name":"benzyl isoquinoline alkaloid biosynthesis","type":"exact"},{"name":"benzyl isoquinoline alkaloid formation","type":"exact"},{"name":"benzyl isoquinoline alkaloid synthesis","type":"exact"}],"termid":"GO:0009708"}


id: PBO:0001537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HbrB family protein","termid":"PBO:0001537"}


id: PBO:0064668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 3","termid":"PBO:0064668"}


id: GO:0099032
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic early endosome membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic early endosome membrane (obsolete GO:0099032)","termid":"GO:0099032"}


id: PBO:0043494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 3","termid":"PBO:0043494"}


id: GO:1904072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a presynaptic active zone into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","ISBN:9780387325606","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"presynaptic active zone organization","termid":"GO:1990709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"presynaptic active zone disassembly","synonyms":[{"name":"pre-synaptic active zone component disassembly","type":"narrow"},{"name":"pre-synaptic active zone disassembly","type":"exact"}],"termid":"GO:1904072"}


id: GO:0035817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process where sodium ions are taken up from the collecting ducts and proximal and distal loops of the nephron, which contributes to decreasing the amount of sodium that is excreted in urine per unit time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal sodium ion absorption","termid":"GO:0070294"},{"relation_name":"part_of","term_name":"negative regulation of renal sodium excretion","termid":"GO:0035814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"renal sodium ion absorption involved in negative regulation of renal sodium excretion","termid":"GO:0035817"}


id: GO:0072237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric proximal tubule over time, from its formation to the mature structure. The metanephric proximal tubule is a metanephric nephron tubule that connects Bowman's capsule to the descending thin limb of the loop of Henle in the metanephros. It has a brush border epithelial morphology.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal tubule development","termid":"GO:0072014"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric proximal tubule development","termid":"GO:0072237"}


id: GO:0002457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a T cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["PMID:15120183","PMID:11417857","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"},{"relation_name":"part_of","term_name":"T cell mediated immunity","termid":"GO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell antigen processing and presentation","synonyms":[{"name":"T lymphocyte antigen processing and presentation","type":"exact"},{"name":"T-cell antigen processing and presentation","type":"exact"},{"name":"T-lymphocyte antigen processing and presentation","type":"exact"}],"termid":"GO:0002457"}


id: GO:0140959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An inhibitor activity that acts by base-pairing with a miRNA, exposing it to nuclease-mediated degradation.","definition_xrefs":["PMID:33184237","PMID:36150386"],"gene_count":0,"genotype_count":0,"name":"obsolete base-pairing target-directed miRNA suppressor activity (obsolete GO:0140959)","synonyms":[{"name":"base-pairing target-directed microRNA suppressor activity","type":"exact"}],"termid":"GO:0140959"}


id: PBO:0058274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4651","termid":"PBO:0058274"}


id: GO:1902338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:sart","PMID:12202035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in morphogenesis","termid":"GO:1902337"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in development","termid":"GO:1904746"},{"relation_name":"negatively_regulates","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process involved in morphogenesis","synonyms":[{"name":"down regulation of apoptosis involved in development","type":"related"},{"name":"down regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"down regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"down regulation of morphogenetic apoptosis","type":"related"},{"name":"down-regulation of apoptosis involved in development","type":"related"},{"name":"down-regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"down-regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"down-regulation of morphogenetic apoptosis","type":"related"},{"name":"downregulation of apoptosis involved in development","type":"related"},{"name":"downregulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"downregulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"downregulation of morphogenetic apoptosis","type":"related"},{"name":"inhibition of apoptosis involved in development","type":"related"},{"name":"inhibition of apoptosis involved in morphogenesis","type":"narrow"},{"name":"inhibition of apoptotic process involved in morphogenesis","type":"narrow"},{"name":"inhibition of morphogenetic apoptosis","type":"related"},{"name":"negative regulation of apoptosis involved in development","type":"related"},{"name":"negative regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"negative regulation of morphogenetic apoptosis","type":"related"}],"termid":"GO:1902338"}


id: GO:0015575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of mannitol from one side of a membrane to the other. Mannitol is the alditol derived from D-mannose by reduction of the aldehyde group.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"mannitol transmembrane transporter activity","secondary_identifiers":["GO:0015586"],"synonyms":[{"name":"mannitol permease activity","type":"exact"}],"termid":"GO:0015575"}


id: MONDO:0003491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rectum squamous cell carcinoma (obsolete MONDO:0003491)","termid":"MONDO:0003491","xrefs":{"Monarch":{"xref_id":"0003491"}}}


id: PBO:0068562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 13, pseudogene","termid":"PBO:0068562"}


id: GO:0051450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of myoblasts, resulting in the expansion of a myoblast cell population. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:mtg_muscle","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast proliferation","termid":"GO:0051450"}


id: PBO:0082704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the membrane-bound TORC2 complex; binds to phosphoinositide-(4,5)-bisphosphate through the C-terminal PH domain, anchoring TORC2 to the plasma membrane; binds directly to Tor2p substrate and downstream TORC2 effector Ypk2p, through the conserved central CRIM domain; may function along with Tsc11p as a scaffold for integrity of the TORC2 complex; role in regulating actin organization and growth control; orthologous to human MAPKAP1/SIN1","termid":"PBO:0082704"}


id: PBO:0066664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHO family interacting cell polarization regulator 1","termid":"PBO:0066664"}


id: GO:0002175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular protein localization process in which a protein is transported to, or maintained at, the paranode region of an axon.","definition_xrefs":["PMID:18803321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to axon","termid":"GO:0099612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to paranode region of axon","synonyms":[{"name":"protein localisation to paranode region of axon","type":"exact"}],"termid":"GO:0002175"}


id: GO:0170066
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111550],"is_not":false,"summary":null,"term":"GO:0170066"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of polyamine biosynthesis. Polyamine biosynthesis is the chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups.","definition_xrefs":["PMID:9769097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of polyamine biosynthetic process","termid":"GO:0010967"},{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"negatively_regulates","term_name":"polyamine biosynthetic process","termid":"GO:0006596"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of polyamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0170066","terms_by_termid":{"GO:0170066":null}}


id: PBO:0050222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2","termid":"PBO:0050222"}


id: PBO:0079084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 1-1","termid":"PBO:0079084"}


id: GO:0005763
data:
  {"annotated_genes":["SJAG_00513","SJAG_02359","SJAG_04281","SJAG_04494","SJAG_00628","SJAG_02452","SJAG_02067","SJAG_00860","SJAG_04173","SJAG_05320","SJAG_03065","SJAG_02777","SJAG_04918","SJAG_00944","SJAG_00105","SJAG_01767","SJAG_00148","SJAG_02201","SJAG_00060","SJAG_03584","SJAG_02643","SJAG_01468","SJAG_04788","SJAG_00782","SJAG_04753","SJAG_01734","SJAG_02324","SJAG_04378","SJAG_04164","SJAG_03053","SJAG_01520","SJAG_00889"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72757,72977,73609,74477,74587,76205,76853,78732,90254,92406,94520,94822,96256,96958,98314,98315,98547,102650,103421,104344,106395,106761,108449,108708,108953,110503,110754,111037,112742,115979,116401,118481],"is_not":false,"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"The smaller of the two subunits of a mitochondrial ribosome.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar small ribosomal subunit","termid":"GO:0000314"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial ribosome","termid":"GO:0005761"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00513":null,"SJAG_00628":null,"SJAG_00782":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00944":null,"SJAG_01468":null,"SJAG_01520":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_02067":null,"SJAG_02201":null,"SJAG_02324":null,"SJAG_02359":null,"SJAG_02452":null,"SJAG_02643":null,"SJAG_02777":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03584":null,"SJAG_04164":null,"SJAG_04173":null,"SJAG_04281":null,"SJAG_04378":null,"SJAG_04494":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04918":null,"SJAG_05320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005739","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitochondrial small ribosomal subunit","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"28S ribosomal subunit, mitochondrial","type":"narrow"},{"name":"mitochondrial ribosomal SSU complex","type":"exact"},{"name":"mitochondrial ribosomal small subunit complex","type":"exact"}],"termid":"GO:0005763","terms_by_termid":{"GO:0005763":null}}


id: GO:0045743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040036"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"activation of fibroblast growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of FGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of FGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of FGFR signaling pathway","type":"exact"},{"name":"stimulation of fibroblast growth factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of fibroblast growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0045743"}


id: FYECO:0000109
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that describes the presence of one or more substances at higher than default levels in growth medium, assay buffer, etc.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical added or excluded","termid":"FYECO:0000059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping excess","termid":"FYECO:0000109"}


id: MONDO:0043280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition caused by degeneration, atrophy, and destruction of the distal part of a nerve fiber's axon and myelin, when continuity with the neural cell nucleus has been severed due to injury. Signs and symptoms include muscle weakness, altered sensation, and limb numbness.","definition_xrefs":["NCIT:C85223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wallerian degeneration","secondary_identifiers":["MEDGEN:12132","UMLS:C0043020","MESH:D014855"],"synonyms":[{"name":"Degeneration, Wallerian","type":"related"},{"name":"Wallerian Degeneration","type":"exact"},{"name":"Wallerian degeneration of the pyramidal tract","type":"related"}],"termid":"MONDO:0043280","xrefs":{"Monarch":{"xref_id":"0043280"}}}


id: PBO:0003676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor, Atf-CREB family Atf1","termid":"PBO:0003676"}


id: SO:0002130
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that contains a CDS but has no stop codon before the polyA site is reached.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSD_transcript","synonyms":[{"name":"non_stop_decay_transcript","type":"exact"}],"termid":"SO:0002130"}


id: GO:1905554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of blood vessel branching.","definition_xrefs":["GOC:TermGenie","PMID:23201774","GOC:nc","GOC:BHF","GO_REF:0000058","GOC:BHF_telomere"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of angiogenesis","termid":"GO:0016525"},{"relation_name":"is_a","term_name":"negative regulation of morphogenesis of an epithelium","termid":"GO:1905331"},{"relation_name":"is_a","term_name":"regulation of blood vessel branching","termid":"GO:1905553"},{"relation_name":"negatively_regulates","term_name":"branching involved in blood vessel morphogenesis","termid":"GO:0001569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel branching","synonyms":[{"name":"down regulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"down regulation of patterning of blood vessels","type":"exact"},{"name":"down-regulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"down-regulation of patterning of blood vessels","type":"exact"},{"name":"downregulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"downregulation of patterning of blood vessels","type":"exact"},{"name":"inhibition of branching involved in blood vessel morphogenesis","type":"narrow"},{"name":"inhibition of patterning of blood vessels","type":"narrow"},{"name":"negative regulation of branching involved in blood vessel morphogenesis","type":"exact"}],"termid":"GO:1905554"}


id: PBO:0045885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 epsilon 1","termid":"PBO:0045885"}


id: MOD:01105
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-bromobenzyloxycarbonyl","synonyms":[{"name":"BrZ","type":"exact"}],"termid":"MOD:01105"}


id: PBO:0003285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Elg1","termid":"PBO:0003285"}


id: PBO:0052461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 9","termid":"PBO:0052461"}


id: PBO:0013099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNP core protein Smg1","termid":"PBO:0013099"}


id: GO:0048884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the neuromast over time, from its formation to the mature structure. The neuromast is the sensory organ of the lateral line and is composed of a population of sensory hair cells, and nonsensory supporting cells and mantle cells. Neuromasts are located superficially on the epithelium or in lateral line canals.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"lateral line development","termid":"GO:0048882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast development","termid":"GO:0048884"}


id: PBO:0081465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 335","termid":"PBO:0081465"}


id: FYPO:0004629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic DNA replication is normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA replication","termid":"FYPO:0001133"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic DNA replication","synonyms":[{"name":"normal DNA replication during mitotic cell cycle","type":"exact"},{"name":"normal DNA replication during vegetative growth","type":"exact"}],"termid":"FYPO:0004629"}


id: PATO:0002213
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's shape being inversely clavate.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obclavate","termid":"PATO:0002213"}


id: GO:0008783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: agmatine + H2O = putrescine + urea.","definition_xrefs":["RHEA:13929","EC:3.5.3.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"agmatinase activity","secondary_identifiers":["KEGG_REACTION:R01157","MetaCyc:AGMATIN-RXN","Reactome:R-HSA-350604"],"synonyms":[{"name":"SpeB","type":"related"},{"name":"agmatine amidinohydrolase","type":"broad"},{"name":"agmatine ureohydrolase activity","type":"related"}],"termid":"GO:0008783"}


id: GO:1901298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hydrogen peroxide-mediated programmed cell death.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"hydrogen peroxide-mediated programmed cell death","termid":"GO:0010421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901298"}


id: GO:0044094
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any constituent part of a host cell's nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. The host is the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular part","termid":"GO:0033646"},{"relation_name":"part_of","term_name":"host cell nucleus","termid":"GO:0042025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear part","termid":"GO:0044094"}


id: MONDO:0016641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"limb transversal defect-cardiac anomaly syndrome","secondary_identifiers":["UMLS:C2931047","MESH:C535856","Orphanet:2492","MEDGEN:419705"],"synonyms":[{"name":"Hecht-Scott syndrome","type":"exact"}],"termid":"MONDO:0016641","xrefs":{"Monarch":{"xref_id":"0016641"}}}


id: MONDO:0019494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cardiac tumors are benign or malignant neoplasms arising primarily in the inner lining, muscle layer, or the surrounding pericardium of the heart. They can be primary or metastatic.","definition_xrefs":["Orphanet:875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart neoplasm","termid":"MONDO:0021209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"primary pediatric heart tumor","secondary_identifiers":["ICD10CM:D15.1","UMLS:C4274356","MEDGEN:895113","GARD:18710"],"synonyms":[{"name":"Cardiac tumor of child","type":"exact"},{"name":"Cardiac tumour of child","type":"exact"},{"name":"heart tumor of child","type":"exact"},{"name":"heart tumour of child","type":"exact"},{"name":"paediatric heart neoplasm","type":"exact"},{"name":"pediatric heart neoplasm","type":"exact"}],"termid":"MONDO:0019494","xrefs":{"Monarch":{"xref_id":"0019494"}}}


id: GO:1905131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of carcinine from one side of a membrane to the other.","definition_xrefs":["GOC:dph","PMID:26713872","GO_REF:0000070","PMID:26653853","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"carcinine transmembrane transporter activity","termid":"GO:1905131"}


id: MONDO:0021046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant biphasic neoplasm that arises from the breast parenchyma. It is characterized by the presence of an epithelial and a mesenchymal (stromal) component. The typical examples are fibroadenoma and phyllodes tumor.","definition_xrefs":["NCIT:C40405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroepithelial neoplasm","termid":"MONDO:0021045"},{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast fibroepithelial neoplasm","secondary_identifiers":["MEDGEN:267408","ONCOTREE:BFN","UMLS:C1511309"],"synonyms":[{"name":"BFN","type":"related"},{"name":"breast fibroepithelial neoplasm","type":"exact"},{"name":"breast fibroepithelial neoplasms","type":"related"},{"name":"breast fibroepithelial tumor","type":"exact"},{"name":"breast fibroepithelial tumour","type":"exact"}],"termid":"MONDO:0021046","xrefs":{"Monarch":{"xref_id":"0021046"}}}


id: PBO:0070271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 6","termid":"PBO:0070271"}


id: PBO:0064986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich protein BstNI subfamily 3","termid":"PBO:0064986"}


id: GO:0061849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to telomeric G-quadruplex DNA structures, in which groups of four guanines adopt a flat, cyclic Hoogsteen hydrogen-bonding arrangement known as a guanine tetrad. The stacking of guanine tetrads results in G-quadruplex DNA structures in telomeres.","definition_xrefs":["GOC:nc","PMID:9512530","GOC:BHF","GOC:BHF_telomere","PMID:16142245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomeric DNA binding","termid":"GO:0042162"},{"relation_name":"is_a","term_name":"G-quadruplex DNA binding","termid":"GO:0051880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"telomeric G-quadruplex DNA binding","termid":"GO:0061849"}


id: GO:0062195
data:
  {"annotated_genes":["SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97611],"is_not":false,"summary":null,"term":"GO:0062195"}]},"cv_name":"biological_process","definition":"The organization process that preserves a microtubule bundle in a stable functional or structural state.","definition_xrefs":["PMID:18061564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule bundle maintenance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062195","terms_by_termid":{"GO:0062195":null}}


id: PBO:0052042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kidney associated DCDC2 antisense RNA 1","termid":"PBO:0052042"}


id: GO:0098902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of membrane depolarization during an action potential. Membrane depolarization is the process in which membrane potential changes in the depolarizing direction from the resting potential.","definition_xrefs":["GOC:tb","GOC:dph","ISBN:978-0-07-139011-8","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization","termid":"GO:0003254"},{"relation_name":"regulates","term_name":"membrane depolarization during action potential","termid":"GO:0086010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane depolarization during action potential","termid":"GO:0098902"}


id: GO:0070159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling threonine to threonyl-tRNA in a mitochondrion, catalyzed by threonyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"threonyl-tRNA aminoacylation","termid":"GO:0006435"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0140053","GO:0006520","GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mitochondrial threonyl-tRNA aminoacylation","termid":"GO:0070159"}


id: GO:0009277
data:
  {"annotated_genes":["SJAG_04073","SJAG_03204","SJAG_01835","SJAG_02945","SJAG_01017","SJAG_03057","SJAG_03295","SJAG_06621","SJAG_00340","SJAG_01975","SJAG_00620","SJAG_01970","SJAG_01755","SJAG_00876","SJAG_01086","SJAG_04327","SJAG_06622","SJAG_02478","SJAG_03483","SJAG_01321","SJAG_02916","SJAG_00784","SJAG_04236","SJAG_04720","SJAG_04723","SJAG_00218","SJAG_01290","SJAG_02135","SJAG_04067","SJAG_04238","SJAG_01288","SJAG_02649","SJAG_03013","SJAG_04864","SJAG_04771","SJAG_01028","SJAG_02192","SJAG_02222","SJAG_00027","SJAG_00096","SJAG_02093","SJAG_03828","SJAG_00239","SJAG_04184","SJAG_03903"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71644,72837,73762,73942,74862,76213,76782,77020,78160,90247,90443,91920,94345,101852,102792,106462,107057,109279,109280,109281,109282,109283,109284,109285,113721,113722,114861,115140,115991,116014,118172,118738],"is_not":false,"summary":null,"term":"GO:0009277"},{"annotations":[109438,114464,90568,114756,118180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005619"},{"annotations":[108134],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043188"},{"annotations":[92096],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005631"},{"annotations":[116954,103060,103314,103313,107221],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070263"},{"annotations":[87836],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005632"}]},"cv_name":"cellular_component","definition":"A rigid yet dynamic structure surrounding the plasma membrane that affords protection from stresses and contributes to cell morphogenesis, consisting of extensively cross-linked glycoproteins and carbohydrates. The glycoproteins may be modified with N- or O-linked carbohydrates, or glycosylphosphatidylinositol (GPI) anchors; the polysaccharides are primarily branched glucans, including beta-linked and alpha-linked glucans, and may also include chitin and other carbohydrate polymers, but not cellulose or pectin. Enzymes involved in cell wall biosynthesis are also found in the cell wall. Note that some forms of fungi develop a capsule outside of the cell wall under certain circumstances; this is considered a separate structure.","definition_xrefs":["GOC:mtg_sensu","PMID:16927300","GOC:mcc","PMID:11283274","PMID:3319422","ISBN:3540601864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall","termid":"GO:0005618"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00096":null,"SJAG_00218":null,"SJAG_00239":null,"SJAG_00340":null,"SJAG_00620":null,"SJAG_00784":null,"SJAG_00876":null,"SJAG_01017":null,"SJAG_01028":null,"SJAG_01086":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01755":null,"SJAG_01835":null,"SJAG_01970":null,"SJAG_01975":null,"SJAG_02093":null,"SJAG_02135":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02478":null,"SJAG_02649":null,"SJAG_02916":null,"SJAG_02945":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03204":null,"SJAG_03295":null,"SJAG_03483":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04067":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04327":null,"SJAG_04720":null,"SJAG_04723":null,"SJAG_04771":null,"SJAG_04864":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"fungal-type cell wall","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"beta-glucan-containing cell wall","type":"related"},{"name":"chitin- and beta-glucan-containing cell wall","type":"narrow"},{"name":"chitin-containing cell wall","type":"related"}],"termid":"GO:0009277","terms_by_termid":{"GO:0005619":null,"GO:0005631":null,"GO:0005632":null,"GO:0009277":null,"GO:0043188":null,"GO:0070263":null}}


id: PBO:0056927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major intrinsic protein of lens fiber","termid":"PBO:0056927"}


id: GO:0039658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex containing TBK1 (TANK-binding kinase 1), IKBKE (I-Kappa-B kinase epsilon/IKKE/IKK-epsilon) and the DEAD box family RNA helicase DDX3.","definition_xrefs":["PMID:18636090","VZ:719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TBK1-IKKE-DDX3 complex","synonyms":[{"name":"TBK1-IKBKE-DDX3 complex","type":"exact"}],"termid":"GO:0039658"}


id: GO:0033850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + isopentenyl diphosphate = 2-cis,6-trans-farnesyl diphosphate + diphosphate.","definition_xrefs":["EC:2.5.1.68","RHEA:23300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"Z-farnesyl diphosphate synthase activity","secondary_identifiers":["KEGG_REACTION:R08528","MetaCyc:2.5.1.68-RXN"],"synonyms":[{"name":"(Z)-farnesyl diphosphate synthase activity","type":"related"},{"name":"geranyl-diphosphate:isopentenyl-diphosphate geranylcistransferase activity","type":"related"}],"termid":"GO:0033850"}


id: PBO:0036465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human IFRD1 ortholog","termid":"PBO:0036465"}


id: MONDO:0021515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the ethmoid sinus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"ethmoidal sinus neoplasm","termid":"MONDO:0001764"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of ethmoidal sinus","secondary_identifiers":["MEDGEN:91050","ICD9:212.0","UMLS:C0345670","SCTID:92093000","NCIT:C4417"],"synonyms":[{"name":"benign ethmoid sinus neoplasm","type":"exact"},{"name":"benign ethmoid sinus tumor","type":"exact"},{"name":"benign ethmoid sinus tumour","type":"exact"},{"name":"benign ethmoidal sinus neoplasm","type":"exact"},{"name":"benign ethmoidal sinus tumor","type":"exact"},{"name":"benign ethmoidal sinus tumour","type":"exact"},{"name":"benign neoplasm of ethmoid sinus","type":"exact"},{"name":"benign neoplasm of the ethmoid sinus","type":"exact"},{"name":"benign neoplasm of the ethmoidal sinus","type":"exact"},{"name":"benign tumor of ethmoid sinus","type":"exact"},{"name":"benign tumor of ethmoidal sinus","type":"exact"},{"name":"benign tumor of the ethmoid sinus","type":"exact"},{"name":"benign tumor of the ethmoidal sinus","type":"exact"},{"name":"benign tumour of ethmoid sinus","type":"exact"},{"name":"benign tumour of ethmoidal sinus","type":"exact"},{"name":"benign tumour of the ethmoid sinus","type":"exact"},{"name":"benign tumour of the ethmoidal sinus","type":"exact"},{"name":"ethmoid sinus benign neoplasm","type":"exact"}],"termid":"MONDO:0021515","xrefs":{"Monarch":{"xref_id":"0021515"}}}


id: PBO:0086592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; expression directly regulated by the metabolic and meiotic transcriptional regulator Ume6p; overexpression causes a cell cycle delay or arrest; non-essential gene; YIR016W has a paralog, YOL036W, that arose from the whole genome duplication","termid":"PBO:0086592"}


id: PBO:0077317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 52B","termid":"PBO:0077317"}


id: PBO:0070165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 79 pseudogene","termid":"PBO:0070165"}


id: PBO:0082945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic inorganic pyrophosphatase (PPase); homodimer that catalyzes the rapid exchange of oxygens from Pi with water, highly expressed and essential for viability, active-site residues show identity to those from E. coli PPase","termid":"PBO:0082945"}


id: PBO:0079893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 2","termid":"PBO:0079893"}


id: GO:0042624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction is not directly coupled to any other reaction.","definition_xrefs":["PMID:12912988"],"gene_count":0,"genotype_count":0,"name":"obsolete ATPase activity, uncoupled (obsolete GO:0042624)","termid":"GO:0042624"}


id: MONDO:0013761
data:
  {"annotated_genes":["SJAG_03362"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86975],"is_not":false,"summary":null,"term":"MONDO:0013761"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine-responsive dysfunction syndrome","termid":"MONDO:0000152"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"childhood encephalopathy due to thiamine pyrophosphokinase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:482496","GARD:13571","OMIM:614458","UMLS:C3280866","Orphanet:293955"],"synonyms":[{"name":"THMD5","type":"related"},{"name":"childhood encephalopathy due to thiamine pyrophosphokinase deficiency","type":"exact"},{"name":"encephalopathy, episodic, due to thiamine pyrophosphokinase deficiency","type":"related"},{"name":"thiamine metabolism dysfunction syndrome 5 (episodic encephalopathy type)","type":"related"}],"termid":"MONDO:0013761","terms_by_termid":{"MONDO:0013761":null},"xrefs":{"Monarch":{"xref_id":"0013761"}}}


id: MONDO:1012529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"recurrent inflammatory pulmonary disease, non-human animal","termid":"MONDO:1011932"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recurrent inflammatory pulmonary disease, dog","secondary_identifiers":["OMIA:002205-9615"],"termid":"MONDO:1012529","xrefs":{"Monarch":{"xref_id":"1012529"}}}


id: GO:0032396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class I protein complex to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["PMID:9597134","PMID:11858820","PMID:9368779","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class I receptor activity","termid":"GO:0032393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"inhibitory MHC class I receptor activity","termid":"GO:0032396"}


id: MONDO:0010949
data:
  {"annotated_genes":["SJAG_03137","SJAG_03072"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85663,85664],"is_not":false,"summary":null,"term":"MONDO:0010949"}]},"cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease type 2B (CMT2B) is a severe form of axonal Charcot-Marie-Tooth disease, a peripheral sensorimotor neuropathy. CMT2B onset, in the 2nd or 3rd decade, is characterized by ulcerations and infections of feet. Symmetric and distal weakness develops mostly in the legs together with a severe symmetric distal sensory loss, tendon reflexes are only reduced at ankles and foot deformities, including pes cavus or planus and hammer toes, appear in childhood.","definition_xrefs":["Orphanet:99936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03072":null,"SJAG_03137":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 2B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:600882","MEDGEN:371512","icd11.foundation:1425224652","DOID:0110159","UMLS:C1833219","GARD:9192","MESH:C537989","SCTID:717008005"],"synonyms":[{"name":"CMT 2B","type":"related"},{"name":"CMT2B","type":"exact"},{"name":"Charcot Marie Tooth disease type 2B","type":"related"},{"name":"Charcot-Marie-Tooth disease type 2 caused by mutation in RAB7A","type":"exact"},{"name":"Charcot-Marie-Tooth disease, autosomal dominant, type 2B","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2B","type":"related"},{"name":"Charcot-Marie-Tooth disease, neuronal, type 2B","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 2B","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2B","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2B","type":"related"},{"name":"HMSN IIB","type":"exact"},{"name":"HMSN2B","type":"exact"},{"name":"RAB7A Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2B","type":"exact"},{"name":"hereditary motor and sensory neuropathy 2 B (HMSN 2 B)","type":"related"},{"name":"hereditary motor and sensory neuropathy 2B","type":"related"},{"name":"hereditary motor and sensory nueropathy IIB","type":"exact"},{"name":"peripheral sensory neuropathy, autosomal dominant (PSN)","type":"related"}],"termid":"MONDO:0010949","terms_by_termid":{"MONDO:0010949":null},"xrefs":{"Monarch":{"xref_id":"0010949"}}}


id: PBO:0044487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 27 subfamily C member 1","termid":"PBO:0044487"}


id: PBO:0056265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mastermind like transcriptional coactivator 1","termid":"PBO:0056265"}


id: PBO:0065054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 8","termid":"PBO:0065054"}


id: PR:O13894
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug103 gene.","definition_xrefs":["UniProtKB:O13894","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 103 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.02c","synonyms":[{"name":"Spom972h-mug103","type":"exact"}],"termid":"PR:O13894"}


id: PBO:0026696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_melibiose_carbon_source","termid":"PBO:0026696"}


id: PBO:0048621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit 2","termid":"PBO:0048621"}


id: PBO:0029337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_phosphorylation","termid":"PBO:0029337"}


id: GO:0015283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete apoptogenic cytochrome c release channel activity (obsolete GO:0015283)","synonyms":[{"name":"Bcl-2","type":"narrow"},{"name":"apoptogenic cytochrome c release channel activity","type":"exact"}],"termid":"GO:0015283"}


id: GO:0043933
data:
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