# terms

id: PBO:0080254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 17 pseudogene","termid":"PBO:0080254"}


id: MONDO:0013270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Rett syndrome, congenital variant (obsolete MONDO:0013270)","secondary_identifiers":["GARD:15664"],"termid":"MONDO:0013270","xrefs":{"Monarch":{"xref_id":"0013270"}}}


id: PR:Q9P6N2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6N2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pdp3-interacting factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.14","synonyms":[{"name":"Spom972h-ptf1","type":"exact"}],"termid":"PR:Q9P6N2"}


id: MONDO:0002050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melancholy feeling of sadness and despair.","definition_xrefs":["NCIT:C2982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mood disorder","termid":"MONDO:0005371"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depressive disorder","secondary_identifiers":["ICD9:311","MESH:D003866","MFOMD:0000013","UMLS:C0011581","SCTID:35489007","DOID:1596","MEDGEN:4229","ICD10CM:F32"],"synonyms":[{"name":"depression","type":"exact"},{"name":"melancholia","type":"related"},{"name":"melancholias","type":"related"},{"name":"mental depression","type":"exact"},{"name":"syndrome, depressive","type":"related"},{"name":"syndromes, depressive","type":"related"}],"termid":"MONDO:0002050","xrefs":{"Monarch":{"xref_id":"0002050"}}}


id: PBO:0117140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM4 antisense RNA 1","termid":"PBO:0117140"}


id: GO:1904699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of acinar cell proliferation.","definition_xrefs":["PMID:9788538","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of acinar cell proliferation","termid":"GO:1904697"},{"relation_name":"positively_regulates","term_name":"acinar cell proliferation","termid":"GO:1990863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acinar cell proliferation","synonyms":[{"name":"activation of acinar cell proliferation","type":"narrow"},{"name":"activation of acinic cell proliferation","type":"narrow"},{"name":"activation of acinous cell proliferation","type":"narrow"},{"name":"positive regulation of acinic cell proliferation","type":"exact"},{"name":"positive regulation of acinous cell proliferation","type":"exact"},{"name":"up regulation of acinar cell proliferation","type":"exact"},{"name":"up regulation of acinic cell proliferation","type":"exact"},{"name":"up regulation of acinous cell proliferation","type":"exact"},{"name":"up-regulation of acinar cell proliferation","type":"exact"},{"name":"up-regulation of acinic cell proliferation","type":"exact"},{"name":"up-regulation of acinous cell proliferation","type":"exact"},{"name":"upregulation of acinar cell proliferation","type":"exact"},{"name":"upregulation of acinic cell proliferation","type":"exact"},{"name":"upregulation of acinous cell proliferation","type":"exact"}],"termid":"GO:1904699"}


id: PBO:0091971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf17 (no initiator methionine)","termid":"PBO:0091971"}


id: PBO:0087451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex that inhibits sister chromatid cohesion; also negatively regulates chromosome condensation; inhibited by Eco1p-acetylated cohesin subunits Smc3p and Mcd1p; binds Smc3p ATPase head of cohesin; related to the human Wapl protein that controls the association of cohesin with chromatin","termid":"PBO:0087451"}


id: GO:0141191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of HRI-mediated signaling.","definition_xrefs":["PMID:38297121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of HRI-mediated signaling","termid":"GO:0141191"}


id: PBO:0054114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1479","termid":"PBO:0054114"}


id: GO:0061798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP=(8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate.","definition_xrefs":["PMID:25896388","GOC:dph","GOC:ik"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"GTP 3',8'-cyclase activity","secondary_identifiers":["RHEA:49576","EC:4.1.99.22","MetaCyc:RXN-8340"],"termid":"GO:0061798"}


id: PBO:0060794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5","termid":"PBO:0060794"}


id: GO:1905141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apical ectodermal ridge formation.","definition_xrefs":["PMID:18359901","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of apical ectodermal ridge formation","termid":"GO:1905140"},{"relation_name":"negatively_regulates","term_name":"apical ectodermal ridge formation","termid":"GO:1905139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apical ectodermal ridge formation","synonyms":[{"name":"down regulation of AER formation","type":"related"},{"name":"down regulation of apical ectodermal ridge formation","type":"exact"},{"name":"down regulation of apical epidermal ridge formation","type":"exact"},{"name":"down regulation of crista ectodermalis apicalis formation","type":"related"},{"name":"down-regulation of AER formation","type":"related"},{"name":"down-regulation of apical ectodermal ridge formation","type":"exact"},{"name":"down-regulation of apical epidermal ridge formation","type":"exact"},{"name":"down-regulation of crista ectodermalis apicalis formation","type":"related"},{"name":"downregulation of AER formation","type":"related"},{"name":"downregulation of apical ectodermal ridge formation","type":"exact"},{"name":"downregulation of apical epidermal ridge formation","type":"exact"},{"name":"downregulation of crista ectodermalis apicalis formation","type":"related"},{"name":"inhibition of AER formation","type":"related"},{"name":"inhibition of apical ectodermal ridge formation","type":"narrow"},{"name":"inhibition of apical epidermal ridge formation","type":"narrow"},{"name":"inhibition of crista ectodermalis apicalis formation","type":"related"},{"name":"negative regulation of AER formation","type":"related"},{"name":"negative regulation of apical epidermal ridge formation","type":"exact"},{"name":"negative regulation of crista ectodermalis apicalis formation","type":"related"}],"termid":"GO:1905141"}


id: PBO:0090978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate Iss10 ortholog","termid":"PBO:0090978"}


id: PBO:0048705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine receptor alpha 2","termid":"PBO:0048705"}


id: PBO:0060418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acylethanolamine acid amidase","termid":"PBO:0060418"}


id: PBO:0076914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor AP-2 beta","termid":"PBO:0076914"}


id: PBO:0004723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate isomerase (predicted)","termid":"PBO:0004723"}


id: GO:0060625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein deneddylation, the removal of a ubiquitin-like protein of the NEDD8 type from a protein.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"regulates","term_name":"protein deneddylation","termid":"GO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"regulation of protein deneddylation","secondary_identifiers":["GO:0060626"],"synonyms":[{"name":"regulation of cullin deneddylation","type":"narrow"}],"termid":"GO:0060625"}


id: PR:O94401
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vesicular integral-membrane protein VIP36 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-type lectin-like domain-containing protein C126.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC126.08c","secondary_identifiers":["UniProtKB:O94401"],"synonyms":[{"name":"Spom972h-LMAN2","type":"exact"}],"termid":"PR:O94401"}


id: GO:0009760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The combination of atmospheric CO2 with a 3-carbon molecule phosphoenol pyruvate (PEP) in the mesophyll cells to make a 4-carbon acid which is immediately converted to malic acid. The malic acid is then passed across to the bundle sheath cells where it is broken down again to pyruvic acid and CO2. The acid is passed back to the mesophyll cells to be used again, while the CO2 is fed into the reductive pentose-phosphate cycle (Calvin cycle) and converted into sugar and starch.","definition_xrefs":["ISBN:0816017360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon fixation","termid":"GO:0015977"},{"relation_name":"is_a","term_name":"photosynthesis, dark reaction","termid":"GO:0019685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"C4 photosynthesis","secondary_identifiers":["Wikipedia:C4_carbon_fixation"],"termid":"GO:0009760"}


id: PBO:0054977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2391","termid":"PBO:0054977"}


id: GO:0140699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + GTP = 2 diphosphate + cyclic GMP-AMP.","definition_xrefs":["PMID:23258413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cyclic GMP-AMP synthase activity","synonyms":[{"name":"cyclic-GMP-AMP synthase activity","type":"exact"}],"termid":"GO:0140699"}


id: GO:2000360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of binding of sperm to the zona pellucida.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"is_a","term_name":"regulation of binding of sperm to zona pellucida","termid":"GO:2000359"},{"relation_name":"negatively_regulates","term_name":"binding of sperm to zona pellucida","termid":"GO:0007339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of binding of sperm to zona pellucida","synonyms":[{"name":"negative regulation of ZPG binding","type":"related"}],"termid":"GO:2000360"}


id: PBO:0045325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOCK4 antisense RNA 1","termid":"PBO:0045325"}


id: GO:0043475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pigment, any general or particular coloring matter in living organisms, as part of the accumulation of pigment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process involved in pigmentation","termid":"GO:0043474"},{"relation_name":"part_of","term_name":"pigment accumulation","termid":"GO:0043476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment metabolic process involved in pigment accumulation","synonyms":[{"name":"pigment metabolic process during pigment accumulation","type":"related"},{"name":"pigment metabolism during pigment accumulation","type":"related"}],"termid":"GO:0043475"}


id: MONDO:1012536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"atypical thrombasthenia, non-human animal","termid":"MONDO:1011706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical thrombasthenia, horse","secondary_identifiers":["OMIA:002272-9796"],"termid":"MONDO:1012536","xrefs":{"Monarch":{"xref_id":"1012536"}}}


id: GO:0102428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: kaempferol 3-O-glucoside + UDP-alpha-D-glucose = kaempferol-3-gentiobioside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete kaempferol-3-O-glucoside 1,6-glucosyltransferase activity (obsolete GO:0102428)","termid":"GO:0102428"}


id: PBO:0056332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 13","termid":"PBO:0056332"}


id: GO:0090385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of a phagolysosome from a phagosome and a lysosome.","definition_xrefs":["GOC:tb","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"phagolysosome assembly","termid":"GO:0001845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0006810","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"phagosome-lysosome fusion","termid":"GO:0090385"}


id: PATO:0002296
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a surface by virtue of the bearer's being marked by the presence of small, shallow, regular depressions called fovae.","definition_xrefs":["Book:Book"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foveate","synonyms":[{"name":"foveolate","type":"related"},{"name":"pitted","type":"related"}],"termid":"PATO:0002296"}


id: MONDO:0010255
data:
  {"annotated_genes":["SJAG_03843"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010863"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03843":null},"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1848042","OMIM:300136","MEDGEN:338376"],"synonyms":[{"name":"Iddmx","type":"related"},{"name":"diabetes mellitus, insulin-dependent, X-linked","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","type":"exact"},{"name":"insulin-dependent diabetes mellitus, X-linked, susceptibility to","type":"related"}],"termid":"MONDO:0010255","terms_by_termid":{"MONDO:0010863":null},"xrefs":{"Monarch":{"xref_id":"0010255"}}}


id: MONDO:0015923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of peripheral neuropathy that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"acquired peripheral neuropathy","secondary_identifiers":["GARD:20243","MEDGEN:1842976","UMLS:C5680596","Orphanet:182086"],"synonyms":[{"name":"acquired peripheral neuropathy","type":"exact"}],"termid":"MONDO:0015923","xrefs":{"Monarch":{"xref_id":"0015923"}}}


id: PBO:0080751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-box binding protein 1 pseudogene 1","termid":"PBO:0080751"}


id: GO:0019337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tetrachloroethylene, a derivative of ethene with the hydrogen atoms replaced by chlorines.","definition_xrefs":["PMID:8663199","GOC:ai","PMID:7988892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated hydrocarbon catabolic process","termid":"GO:0042205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tetrachloroethylene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:tce2","MetaCyc:PCEDEG-PWY"],"synonyms":[{"name":"tetrachloroethene catabolic process","type":"exact"},{"name":"tetrachloroethene catabolism","type":"exact"},{"name":"tetrachloroethylene breakdown","type":"exact"},{"name":"tetrachloroethylene catabolism","type":"exact"},{"name":"tetrachloroethylene degradation","type":"exact"}],"termid":"GO:0019337"}


id: PBO:0079140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 3","termid":"PBO:0079140"}


id: PBO:0089216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination mediator Sfr1","termid":"PBO:0089216"}


id: MONDO:0006494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thyroid disease (obsolete MONDO:0006494)","termid":"MONDO:0006494","xrefs":{"Monarch":{"xref_id":"0006494"}}}


id: GO:0042984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of amyloid-beta.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"regulates","term_name":"amyloid precursor protein biosynthetic process","termid":"GO:0042983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid precursor protein biosynthetic process","synonyms":[{"name":"regulation of APP biosynthesis","type":"exact"},{"name":"regulation of APP biosynthetic process","type":"exact"},{"name":"regulation of amyloid precursor protein anabolism","type":"exact"},{"name":"regulation of amyloid precursor protein biosynthesis","type":"exact"},{"name":"regulation of amyloid precursor protein formation","type":"exact"},{"name":"regulation of amyloid precursor protein synthesis","type":"exact"}],"termid":"GO:0042984"}


id: FYPO:0004962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:12419251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to chromatin at replication origin","synonyms":[{"name":"normal protein localisation to chromatin at replication origin","type":"exact"},{"name":"normal protein localization to chromatin at replication origin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at replication origin during vegetative growth","type":"exact"}],"termid":"FYPO:0004962"}


id: GO:1901749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of leukotriene D4.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene catabolic process","termid":"GO:0036100"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"icosanoid catabolic process","termid":"GO:1901523"},{"relation_name":"is_a","term_name":"leukotriene D4 metabolic process","termid":"GO:1901748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"leukotriene D4 catabolic process","synonyms":[{"name":"leukotriene D4 breakdown","type":"exact"},{"name":"leukotriene D4 catabolism","type":"exact"},{"name":"leukotriene D4 degradation","type":"exact"}],"termid":"GO:1901749"}


id: PBO:0083011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD box RNA helicase; component of the SSU; interacts with Bfr2p and Enp2p; high-copy number suppression of a U14 snoRNA processing mutant suggests an involvement in 18S rRNA synthesis","termid":"PBO:0083011"}


id: FYPO:0005178
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the fungal-type vacuole is abnormal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar morphology","termid":"FYPO:0002257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vacuolar morphology during nitrogen starvation","synonyms":[{"name":"abnormal vacuolar morphology during nitrogen depletion","type":"exact"},{"name":"abnormal vacuolar morphology during nitrogen deprivation","type":"exact"},{"name":"abnormal vacuole morphology during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005178"}


id: SO:0000768
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plasmid that may integrate with a chromosome.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmid","termid":"SO:0000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episome","termid":"SO:0000768"}


id: PBO:0029254
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_negative_regulation_of_DNA_replication_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029254"}


id: PBO:0117416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 11B (putative)","termid":"PBO:0117416"}


id: MONDO:0010329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 77","secondary_identifiers":["DOID:0112039","MEDGEN:335199","MESH:C564511","OMIM:300454","GARD:22678","UMLS:C1845499"],"synonyms":[{"name":"MRX77","type":"exact"},{"name":"intellectual disability, X-linked 77","type":"exact"},{"name":"mental retardation, X-linked 77","type":"related"},{"name":"mental retardation, X-linked 77, X-linked recessive","type":"exact"}],"termid":"MONDO:0010329","xrefs":{"Monarch":{"xref_id":"0010329"}}}


id: PBO:0074153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E2A (pseudogene)","termid":"PBO:0074153"}


id: GO:0030593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte chemotaxis","termid":"GO:0071621"},{"relation_name":"is_a","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil chemotaxis","termid":"GO:0030593"}


id: PBO:0027848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_vegetative_cell","termid":"PBO:0027848"}


id: GO:0090140
data:
  {"annotated_genes":["SJAG_01212","SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[109249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of mitochondrial fission. Mitochondrial fission is the division of a mitochondrion within a cell to form two or more separate mitochondrial compartments.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"mitochondrial fission","termid":"GO:0000266"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01212":null,"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"regulation of mitochondrial fission","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitochondrial division","type":"exact"}],"termid":"GO:0090140","terms_by_termid":{"GO:0090141":null,"GO:0090258":null}}


id: MONDO:0020147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anophthalmia-microphthalmia syndrome (obsolete MONDO:0020147)","secondary_identifiers":["Orphanet:98555"],"termid":"MONDO:0020147","xrefs":{"Monarch":{"xref_id":"0020147"}}}


id: GO:0090703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which a three-stranded D-loop DNA is unwound or 'melted'.","definition_xrefs":["PMID:26503245"],"gene_count":0,"genotype_count":0,"name":"obsolete triplex DNA unwinding (obsolete GO:0090703)","termid":"GO:0090703"}


id: MONDO:0007027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metabolic dysfunction-associated steatohepatitis (MASH, formerly known as nonalcoholic steatohepatitis or NASH) is a type of fatty liver disease. It often develops due to a metabolic disorder, such as obesity or diabetes, resulting in a toxic buildup of fat in the liver. It is the most severe form of metabolic dysfunction-associated steatotic liver disease (MASLD, formerly known as nonalcoholic fatty liver disease or NAFLD).","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis","termid":"MONDO:0002251"},{"relation_name":"is_a","term_name":"metabolic dysfunction-associated steatotic liver disease","termid":"MONDO:0013209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"metabolic dysfunction-associated steatohepatitis","secondary_identifiers":["NCIT:C84445","MedDRA:10053219","EFO:1001249","DOID:0080547","MEDGEN:469032","UMLS:C3241937"],"synonyms":[{"name":"MASH","type":"exact"},{"name":"NASH - nonalcoholic steatohepatitis","type":"exact"},{"name":"non-alcoholic steatohepatitis","type":"exact"},{"name":"nonalcoholic steatohepatitis","type":"exact"}],"termid":"MONDO:0007027","xrefs":{"Monarch":{"xref_id":"0007027"}}}


id: PBO:0075585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 9","termid":"PBO:0075585"}


id: PBO:0073881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 11 member 1","termid":"PBO:0073881"}


id: PBO:0052820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 86","termid":"PBO:0052820"}


id: PBO:0034620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_Cutin-1","termid":"PBO:0034620"}


id: FYPO:0007556
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to diethylstilbestrol. Cells stop growing (and may die) at a concentration of diethylstilbestrol that allows wild type cells to grow.","definition_xrefs":["PMID:33223513","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to diethylstilbestrol","synonyms":[{"name":"hypersensitive to diethylstilbestrol","type":"exact"},{"name":"sensitive to DES","type":"exact"},{"name":"sensitive to diethylstilbestrol during mitotic cell cycle","type":"related"},{"name":"sensitive to diethylstilbestrol during vegetative growth","type":"exact"}],"termid":"FYPO:0007556"}


id: GO:1902379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any chemoattractant activity that is involved in axon guidance.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:21658587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemoattractant activity","termid":"GO:0042056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0098772","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"chemoattractant activity involved in axon guidance","synonyms":[{"name":"chemoattractant activity involved in axon chemotaxis","type":"related"},{"name":"chemoattractant activity involved in axon growth cone guidance","type":"narrow"},{"name":"chemoattractant activity involved in axon pathfinding","type":"exact"}],"termid":"GO:1902379"}


id: PBO:0047849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(p32)","termid":"PBO:0047849"}


id: PBO:0087254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; inhibits the mitotic exit network (MEN) when the spindle position checkpoint is activated; localized asymmetrically to mother cell cortex, spindle pole body and bud neck; KIN4 has a paralog, FRK1, that arose from the whole genome duplication","termid":"PBO:0087254"}


id: PBO:0056292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoamine oxidase A","termid":"PBO:0056292"}


id: GO:0045475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rhythm of the locomotor activity of an organism during its 24 hour activity cycle.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"},{"relation_name":"is_a","term_name":"circadian behavior","termid":"GO:0048512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotor rhythm","synonyms":[{"name":"circadian locomotor activity rhythm","type":"narrow"}],"termid":"GO:0045475"}


id: GO:2000474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of opioid receptor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"G protein-coupled opioid receptor signaling pathway","termid":"GO:0038003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of opioid receptor signaling pathway","synonyms":[{"name":"regulation of opioid receptor signalling pathway","type":"exact"}],"termid":"GO:2000474"}


id: PBO:0030636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_proton_transport","termid":"PBO:0030636"}


id: GO:0050388
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galacturonate + H2O + NAD+ = galactarate + 2 H+ + NADH.","definition_xrefs":["EC:1.1.1.203","RHEA:22404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"uronate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01981","MetaCyc:URONATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"uronate: NAD-oxidoreductase activity","type":"related"},{"name":"uronate:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"uronic acid dehydrogenase activity","type":"related"}],"termid":"GO:0050388"}


id: GO:1900318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from dimethylamine.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from dimethylamine","termid":"GO:2001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from dimethylamine","termid":"GO:1900318"}


id: GO:0075344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of protein levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host protein levels (obsolete GO:0075344)","termid":"GO:0075344"}


id: GO:0120536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 1-phosphate + all-trans-heptaprenyl diphosphate = 3-heptaprenyl-sn-glycero-1-phosphate + diphosphate.","definition_xrefs":["PMID:21761520","RHEA:33495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"heptaprenylglyceryl phosphate synthase activity","secondary_identifiers":["EC:2.5.1.n9"],"synonyms":[{"name":"HepGP synthase activity","type":"exact"},{"name":"glycerol-1-phosphate heptaprenyltransferase activity","type":"exact"}],"termid":"GO:0120536"}


id: PBO:0004061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane amino acid uptake transporter Fnx1","termid":"PBO:0004061"}


id: PBO:0085794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; required for formation of nuclear-associated array of smooth endoplasmic reticulum known as karmellae","termid":"PBO:0085794"}


id: PBO:0054100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1456","termid":"PBO:0054100"}


id: PBO:0077450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 183A","termid":"PBO:0077450"}


id: PBO:0063759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhomeotic homolog 1","termid":"PBO:0063759"}


id: PBO:0042535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5 regulatory subunit associated protein 2","termid":"PBO:0042535"}


id: PR:O13918
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc homeostasis factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.14","secondary_identifiers":["UniProtKB:O13918"],"synonyms":[{"name":"Spom972h-SLC30A1","type":"exact"}],"termid":"PR:O13918"}


id: MONDO:0008184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic agenesis","termid":"MONDO:0009832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreas, dorsal, agenesis of","secondary_identifiers":["OMIM:167755","MESH:C538109","UMLS:C1868659","MEDGEN:357024","GARD:15104"],"synonyms":[{"name":"agenesis of the dorsal pancreas","type":"related"},{"name":"complete agenesis of the dorsal pancreas","type":"related"},{"name":"congenital short pancreas","type":"related"},{"name":"pancreas agenesis, dorsal","type":"related"},{"name":"pancreas, dorsal, agenesis of","type":"exact"},{"name":"partial agenesis of the dorsal pancreas","type":"related"}],"termid":"MONDO:0008184","xrefs":{"Monarch":{"xref_id":"0008184"}}}


id: PBO:0067613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 785, pseudogene","termid":"PBO:0067613"}


id: MONDO:0007015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the membranes surrounding the brain and spinal cord due to a viral infection.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious meningitis","termid":"MONDO:0004796"},{"relation_name":"is_a","term_name":"aseptic meningitis","termid":"MONDO:0006662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral meningitis","secondary_identifiers":["EFO:1001236","ICD9:321.2","NCIT:C118298","ICD10CM:A87","MESH:D008587","SCTID:58170007","DOID:10310","MEDGEN:44355","UMLS:C0025297","ICD9:047.9","ICD9:047.8","MedDRA:10047469"],"termid":"MONDO:0007015","xrefs":{"Monarch":{"xref_id":"0007015"}}}


id: PBO:0058914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12132","termid":"PBO:0058914"}


id: PBO:0051604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 27","termid":"PBO:0051604"}


id: GO:2000318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper 17 type immune response.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"},{"relation_name":"is_a","term_name":"regulation of T-helper 17 type immune response","termid":"GO:2000316"},{"relation_name":"positively_regulates","term_name":"T-helper 17 type immune response","termid":"GO:0072538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper 17 type immune response","synonyms":[{"name":"positive regulation of Th17 immune response","type":"exact"}],"termid":"GO:2000318"}


id: PBO:0087536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein N-terminal acetyltransferase NatA; NatA comprised of Nat1p, Ard1p, and Nat5p; N-terminally acetylates many proteins to influence multiple processes such as cell cycle progression, heat-shock resistance, mating, sporulation, telomeric silencing and early stages of mitophagy; orthologous to human NAA15; expression of both human NAA10 and NAA15 functionally complements ard1 nat1 double mutant although single mutations are not complemented by their orthologs","termid":"PBO:0087536"}


id: PR:O94703
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase I subunit RPA12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11239:SF3","OMA:SCHPO04551","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit RPA12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.03","secondary_identifiers":["UniProtKB:O94703"],"synonyms":[{"name":"DNA-directed RNA polymerase I 13.1 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ZNRD1","type":"exact"}],"termid":"PR:O94703"}


id: GO:0042440
data:
  {"annotated_genes":["SJAG_00626","SJAG_00699","SJAG_01841","SJAG_04109","SJAG_03961","SJAG_00097","SJAG_05283","SJAG_04944","SJAG_01192","SJAG_02896","SJAG_02876","SJAG_01786","SJAG_03862","SJAG_01372","SJAG_00366","SJAG_03173","SJAG_01155","SJAG_04397","SJAG_04984","SJAG_04515"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78700,80385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[112252,114259,101430,98555,105548,74702,100579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[106965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"},{"annotations":[63181,64866,59215,80255,57244,67804,63043,60293],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[77141,71766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pigment, any general or particular coloring matter in living organisms, e.g. melanin.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00366":null,"SJAG_00626":null,"SJAG_00699":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04515":null,"SJAG_04944":null,"SJAG_04984":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pigment metabolism","type":"exact"}],"termid":"GO:0042440","terms_by_termid":{"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null,"GO:0042167":null}}


id: GO:1990435
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron-dense plaque at the upper end of a stereocilia tip link that provides the anchor in the stereocilia membrane on the side of the stereocilium where the tip link ends.","definition_xrefs":["PMID:19447093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereocilia tip-link density","termid":"GO:1990427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"upper tip-link density","synonyms":[{"name":"UTLD","type":"exact"}],"termid":"GO:1990435"}


id: GO:0072037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal stem cell that contributes to the shaping of a nephron. A mesenchymal stem cell is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"is_a","term_name":"mesenchymal stem cell differentiation","termid":"GO:0072497"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal stem cell differentiation involved in nephron morphogenesis","termid":"GO:0072037"}


id: PBO:0050180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxy-3-methylglutaryl-CoA reductase","termid":"PBO:0050180"}


id: PBO:0028267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_RNA_level","termid":"PBO:0028267"}


id: PBO:0029050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation_during_nitrogen_starvation","termid":"PBO:0029050"}


id: MONDO:0859305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with eye movement abnormalities and ataxia","secondary_identifiers":["MEDGEN:1824014","DOID:0081275","OMIM:620094","UMLS:C5774241"],"termid":"MONDO:0859305","xrefs":{"Monarch":{"xref_id":"0859305"}}}


id: GO:0047200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3,4,5-tetrahydrodipicolinate + acetyl-CoA + H2O = L-2-acetamido-6-oxopimelate + CoA.","definition_xrefs":["EC:2.3.1.89","RHEA:13085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"tetrahydrodipicolinate N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04364","MetaCyc:2.3.1.89-RXN"],"synonyms":[{"name":"acetyl-CoA:(S)-2,3,4,5-tetrahydrodipicolinate-2,6-dicarboxylate N2-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:(S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate 2-N-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:L-2,3,4,5-tetrahydrodipicolinate N2-acetyltransferase activity","type":"related"},{"name":"tetrahydrodipicolinate acetylase activity","type":"related"},{"name":"tetrahydrodipicolinate:acetyl-CoA acetyltransferase activity","type":"related"}],"termid":"GO:0047200"}


id: PBO:0040539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B3GALT5 antisense RNA 1","termid":"PBO:0040539"}


id: MONDO:0015665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scleromyxedema is a rare, severe skin disorder. Signs and symptoms include abnormal accumulation of mucin in the skin (mucinosis), causing papular and sclerodermoid bumps; increased production of fibroblasts (connective tissue cells) in the absence of a thyroid disorder; and monoclonal gammopathy (abnormal proteins in the blood). It often involves internal organs and may affect various body systems. The cause of scleromyxedema is not known. There is no standard treatment. Management may involve the use of intravenous immunoglobulin (IVIG), plasmapheresis, thalidomide and corticoids, or more aggressive interventions, such as autologous bone marrow transplantation.","direct_ancestors":[{"relation_name":"is_a","term_name":"lichen myxedematosus","termid":"MONDO:0018432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"scleromyxedema","secondary_identifiers":["MESH:D053718","GARD:7615","NCIT:C85061","Orphanet:167635","SCTID:402468007","UMLS:C0263390","MedDRA:10055046","ICD9:701.8","MEDGEN:120476"],"synonyms":[{"name":"Arndt-Gottron disease","type":"exact"},{"name":"Scleromyxedema","type":"exact"},{"name":"generalised lichenoid papular eruption","type":"exact"},{"name":"generalised papular and sclerodermoid","type":"related"},{"name":"generalised papular and sclerodermoid lichen myxedematosus","type":"exact"},{"name":"generalized lichenoid papular eruption","type":"exact"},{"name":"generalized papular and sclerodermoid","type":"related"},{"name":"generalized papular and sclerodermoid lichen myxedematosus","type":"exact"},{"name":"lichen myxedematosus","type":"related"},{"name":"mucinosis, papular","type":"related"},{"name":"myxedematosus, lichen","type":"related"},{"name":"papular mucinosis","type":"related"},{"name":"scleromyxoedema","type":"exact"}],"termid":"MONDO:0015665","xrefs":{"Monarch":{"xref_id":"0015665"}}}


id: GO:0102486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dCTP + 2 H2O = dCMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dCTP phosphohydrolase activity (obsolete GO:0102486)","termid":"GO:0102486"}


id: MONDO:0010881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndromal osteochondrodysplasia due to a contiguous gene deletion syndrome, characterized by progressive bowing of forearms and forelegs leading to mesomelia, progressive intracarpal or intratarsal bone fusion and fusion of metacarpal bones with proximal phalanges, ptosis, hypertelorism, abnormal soft palate, congenital heart defect, and ureteral anomalies.","definition_xrefs":["Orphanet:2496"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acromesomelic dysplasia","termid":"MONDO:0019696"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 8","termid":"MONDO:0016907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"mesomelia-synostoses syndrome","secondary_identifiers":["SCTID:724147004","MESH:C537348","UMLS:C1838162","GARD:4302","MEDGEN:324959","OMIM:600383"],"synonyms":[{"name":"8q13 microdeletion syndrome","type":"exact"},{"name":"Del(8)q(13)","type":"exact"},{"name":"Verloes-David syndrome","type":"exact"},{"name":"chromosome 8Q13 deletion syndrome","type":"related"},{"name":"dominant mesomelic shortness of stature with acral synostoses, umbilical anomalies, and soft palate agenesis","type":"related"},{"name":"mesomelia synostoses","type":"related"},{"name":"mesomelia-synostoses syndrome","type":"exact"},{"name":"mesomelia-synostoses syndrome, Verloes-David-Pfeiffer type","type":"exact"},{"name":"mesomelic dysplasia with acral synostoses, Verloes-David-Pfeiffer type","type":"exact"},{"name":"mesomelic dysplasia, syndromic","type":"related"},{"name":"monosomy 8q13","type":"exact"}],"termid":"MONDO:0010881","xrefs":{"Monarch":{"xref_id":"0010881"}}}


id: GO:0072313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric glomerular epithelial cell over time, from its formation to the mature structure. Metanephric glomerular epithelial cells are specialized epithelial cells that form part of the metanephric glomerulus; there are two types, metanephric glomerular parietal epithelial cells and metanephric glomerular visceral epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular epithelial cell development","termid":"GO:0072310"},{"relation_name":"part_of","term_name":"metanephric glomerular epithelial cell differentiation","termid":"GO:0072312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular epithelial cell development","termid":"GO:0072313"}


id: PBO:0049088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 143","termid":"PBO:0049088"}


id: MONDO:0007564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pilomatrixoma is a rare and benign hair cell-derived tumor occurring mostly in young adults (usually under the age of 20) and characterized as a 3-30 mm solitary, painless, firm, mobile, deep dermal or subcutaneous tumor, most commonly found in the head, neck or upper extremities. When superficial, the tumors tint the skin blue-red. Multiple pilomatrixomas are seen in myotonic dystrophy, Gardner syndrome, Rubinstein-Taybi syndrome, and Turner syndrome.","definition_xrefs":["Orphanet:91414"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"hair follicle neoplasm","termid":"MONDO:0003413"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pilomatrixoma","secondary_identifiers":["EFO:0009082","GARD:9452","MedDRA:10035040","MESH:D018296","MEDGEN:61666","icd11.foundation:378820295","ICDO:8110/0","NCIT:C7368","OMIM:132600","UMLS:C0206711","SCTID:274901004","DOID:5374"],"synonyms":[{"name":"PTR","type":"related"},{"name":"benign hair follicle neoplasm","type":"narrow"},{"name":"benign pilomatricoma","type":"narrow"},{"name":"benign pilomatrixoma","type":"narrow"},{"name":"calcifying Epitherlioma of Malherbe","type":"exact"},{"name":"calcifying epithelioma of Malherbe","type":"related"},{"name":"epithelioma calcificans of Malherbe","type":"exact"},{"name":"pilomatricoma","type":"exact"},{"name":"pilomatricoma, somatic","type":"exact"},{"name":"pilomatrixoma","type":"exact"},{"name":"pilomatrixoma, benign","type":"exact"}],"termid":"MONDO:0007564","xrefs":{"Monarch":{"xref_id":"0007564"}}}


id: PBO:0044434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily A member 43, pseudogene","termid":"PBO:0044434"}


id: PBO:0083313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF COA1/YIL157C","termid":"PBO:0083313"}


id: PBO:0079024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 7-1","termid":"PBO:0079024"}


id: GO:0043838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Kdo2-lipid A + phosphatidylethanolamine = phosphoethanolamine-Kdo2-lipid A + diacylglycerol.","definition_xrefs":["PMID:15795227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016780","GO:0003824"],"is_obsolete":false,"name":"phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase activity","synonyms":[{"name":"EptB","type":"related"},{"name":"phosphoethanolamine transferase","type":"broad"}],"termid":"GO:0043838"}


id: PBO:0062573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily D member 1 pseudogene","termid":"PBO:0062573"}


id: MONDO:0011038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebellar ataxia - areflexia - pes cavus - optic atrophy - sensorineural hearing loss (CAPOS syndrome) is a rare autosomal dominant neurological disorder characterized by early onset cerebellar ataxia, associated with areflexia, progressive optic atrophy, sensorineural deafness, a pes cavus deformity, and abnormal eye movements.","definition_xrefs":["Orphanet:1171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy plus syndrome","termid":"MONDO:0014720"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"},{"relation_name":"is_a","term_name":"ATP1A3-associated neurological disorder","termid":"MONDO:0700002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0002039","MONDO:0005328"],"is_obsolete":false,"name":"cerebellar ataxia-areflexia-pes cavus-optic atrophy-sensorineural hearing loss syndrome","secondary_identifiers":["MESH:C535351","MEDGEN:318633","NANDO:1200526","GARD:1188","OMIM:601338","SCTID:720634003","UMLS:C1832466"],"synonyms":[{"name":"CAPOS","type":"related"},{"name":"CAPOS syndrome","type":"exact"},{"name":"cerebellar ataxia - areflexia - pes cavus - optic atrophy - sensorineural hearing loss","type":"related"},{"name":"cerebellar ataxia, areflexia, pes cavus, optic atrophy and sensorinural hearing loss","type":"related"},{"name":"cerebellar ataxia, areflexia, pes cavus, optic atrophy, and sensorineural hearing loss","type":"related"}],"termid":"MONDO:0011038","xrefs":{"Monarch":{"xref_id":"0011038"}}}


id: MONDO:0008296
data:
  {"annotated_genes":["SJAG_04109"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86050],"is_not":false,"summary":null,"term":"MONDO:0008296"}]},"cv_name":"mondo","definition":"An instance of porphyria cutanea tarda that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyria cutanea tarda","termid":"MONDO:0015104"},{"relation_name":"is_a","term_name":"UROD-related inherited porphyria","termid":"MONDO:0100498"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04109":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0019142"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005093","MONDO:0002515","MONDO:0005066","MONDO:0019142"],"is_obsolete":false,"name":"familial porphyria cutanea tarda","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1318287619","EFO:0009043","SCTID:59229005","UMLS:C0268323","GARD:17750","OMIM:176100","MEDGEN:75669","Orphanet:443062"],"synonyms":[{"name":"PCT","type":"related"},{"name":"PCT, 'familial' type","type":"related"},{"name":"PCT, type 2","type":"related"},{"name":"Urod deficiency","type":"related"},{"name":"hereditary porphyria cutanea tarda","type":"exact"},{"name":"porphyria cutanea tarda","type":"related"},{"name":"porphyria cutanea tarda type II","type":"exact"},{"name":"porphyria cutanea tarda, susceptibility to","type":"exact"},{"name":"porphyria cutanea tarda, type 2","type":"related"},{"name":"porphyria, Hepatocutaneous type","type":"related"},{"name":"porphyria, hepatoerythropoietic","type":"related"},{"name":"uroporphyrinogen decarboxylase deficiency","type":"related"}],"termid":"MONDO:0008296","terms_by_termid":{"MONDO:0008296":null},"xrefs":{"Monarch":{"xref_id":"0008296"}}}


id: FYPO:0008007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a mitotic spindle assembles and begins to elongate, but collapses during anaphase B, with the collapse being followed by the spindle poles congressing together. In some cases, this is known to be driven by depolymerisation of microtubules part of a merotelic attachment (PMID:19948483).","definition_xrefs":["PomBase:mlr","PMID:19948483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle collapse during anaphase B elongation","termid":"FYPO:0005722"},{"relation_name":"output_of","term_name":"merotelic kinetochore attachment during mitosis","termid":"FYPO:0004381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000138","FYPO:0000002","FYPO:0000631","FYPO:0000337","FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"mitotic spindle collapse during anaphase B elongation with progressive spindle pole congression","termid":"FYPO:0008007"}


id: PBO:0081563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 487","termid":"PBO:0081563"}


id: MONDO:0007988
data:
  {"annotated_genes":["SJAG_05245"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054593"}]},"cv_name":"mondo","definition":"Autosomal dominant form of microcephaly (disease).","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"isolated congenital microcephaly","termid":"MONDO:0016056"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"autosomal dominant primary microcephaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:3605","MESH:C537323","UMLS:C0220693","DOID:14725","MEDGEN:66319","icd11.foundation:774437947","OMIM:156580","Orphanet:2514"],"synonyms":[{"name":"autosomal dominant microcephaly","type":"related"},{"name":"autosomal dominant primary microcephaly","type":"exact"},{"name":"microcephaly (disease), autosomal dominant","type":"exact"},{"name":"microcephaly autosomal dominant","type":"related"},{"name":"microcephaly with autosomal dominant inheritance","type":"related"},{"name":"microcephaly, autosomal dominant","type":"related"}],"termid":"MONDO:0007988","terms_by_termid":{"MONDO:0054593":null},"xrefs":{"Monarch":{"xref_id":"0007988"}}}


id: PBO:0049176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor receptor bound protein 14","termid":"PBO:0049176"}


id: PBO:0069958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1251, pseudogene","termid":"PBO:0069958"}


id: PBO:0086376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATPase containing the DEAD/H helicase-related sequence motif; null mutant displays increased levels of spontaneous Rad52p foci; SWAT-GFP and mCherry fusion proteins localize to the nucleus","termid":"PBO:0086376"}


id: MONDO:1012297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hymen, imperforate, non-human animal","termid":"MONDO:1010279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imperforate hymen, cattle","secondary_identifiers":["OMIA:001107-9913"],"termid":"MONDO:1012297","xrefs":{"Monarch":{"xref_id":"1012297"}}}


id: GO:1900908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of olefin metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of olefin metabolic process","synonyms":[{"name":"regulation of olefin metabolism","type":"exact"}],"termid":"GO:1900908"}


id: FYPO:0001157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population in the vegetative growth phase of the life cycle grows at a faster rate than normal in a medium with higher than standard pH. Standard S. pombe growth media are approximately pH 5.6.","definition_xrefs":["PMID:10467002","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth rate","termid":"FYPO:0000636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002057","FYPO:0000139","FYPO:0002058","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased cell population growth rate at high pH","synonyms":[{"name":"enhanced growth at high pH","type":"related"},{"name":"fast cell population growth at high pH","type":"exact"},{"name":"increased cell population growth rate at high pH during mitotic cell cycle","type":"related"},{"name":"increased cell population growth rate at high pH during vegetative growth","type":"exact"},{"name":"increased cell population proliferation at high pH","type":"related"},{"name":"increased cell proliferation at high pH","type":"related"}],"termid":"FYPO:0001157"}


id: FYPO:0007131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plus ends end of microtubules is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to microtubule plus-end","synonyms":[{"name":"increased protein localisation to microtubule plus-end","type":"exact"},{"name":"increased protein localization to microtubule plus end","type":"exact"},{"name":"increased protein localization to microtubule plus-end during mitotic cell cycle","type":"related"},{"name":"increased protein localization to microtubule plus-end during vegetative growth","type":"exact"}],"termid":"FYPO:0007131"}


id: PBO:0074666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 52","termid":"PBO:0074666"}


id: MONDO:1012791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta that occurs in dogs due to a mutation in the COL1A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta, dog","termid":"MONDO:1011581"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteogenesis imperfecta, COL1A2-related, dog","secondary_identifiers":["OMIA:002112-9615"],"termid":"MONDO:1012791","xrefs":{"Monarch":{"xref_id":"1012791"}}}


id: MONDO:0023807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete midphalangeal hair (obsolete MONDO:0023807)","secondary_identifiers":["MESH:C537471","OMIM:157200"],"synonyms":[{"name":"Middigital hair","type":"related"},{"name":"midphalangeal hair","type":"related"}],"termid":"MONDO:0023807","xrefs":{"Monarch":{"xref_id":"0023807"}}}


id: PBO:0002857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Srb6","termid":"PBO:0002857"}


id: PBO:0044408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily F member 1","termid":"PBO:0044408"}


id: PR:O14367
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gti1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gluconate transport inducer 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1751.01c","synonyms":[{"name":"Spom972h-gti1","type":"exact"}],"termid":"PR:O14367"}


id: GO:0007615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The memory process that results in the formation of consolidated memory resistant to disruption of the patterned activity of the brain, without requiring protein synthesis.","definition_xrefs":["PMID:17088531","PMID:15143285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"memory","termid":"GO:0007613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anesthesia-resistant memory","termid":"GO:0007615"}


id: PBO:0075885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6GAL2 intronic transcript 1","termid":"PBO:0075885"}


id: PR:P08092
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ran1 gene.","definition_xrefs":["UniProtKB:P08092","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of sexual conjugation and meiosis (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.05","synonyms":[{"name":"Spom972h-ran1","type":"exact"}],"termid":"PR:P08092"}


id: PBO:0083629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Effector of Rab GTPase Sec4p; forms a complex with Sec4p and t-SNARE Sec9p; involved in exocytosis and docking and fusion of post-Golgi vesicles with plasma membrane; regulates cell proliferation and colony development via the Rho1-Tor1 pathway; homolog of Drosophila lgl tumor suppressor; SRO7 has a paralog, SRO77, that arose from the whole genome duplication","termid":"PBO:0083629"}


id: GO:0140573
data:
  {"annotated_genes":["SJAG_00302"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[119548],"is_not":false,"summary":null,"term":"GO:0140573"}]},"cv_name":"cellular_component","definition":"A complex comprised of DNA wound around a multisubunit core and associated proteins containing the histone H3, which forms the primary packing unit of DNA into higher order structures.","definition_xrefs":["PMID:33155135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleosome","termid":"GO:0000786"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"histone H3-containing nucleosome","references_by_uniquename":{"PMID:24184107":null},"synonyms":[{"name":"histone H3 containing nucleosome","type":"exact"}],"termid":"GO:0140573","terms_by_termid":{"GO:0140573":null}}


id: GO:0007112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that occurs as part of the male meiotic cell cycle and results in the division of the cytoplasm of a cell to produce two daughter cells.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cytokinesis","termid":"GO:0033206"},{"relation_name":"part_of","term_name":"male meiotic nuclear division","termid":"GO:0007140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"male meiosis cytokinesis","synonyms":[{"name":"cytokinesis after male meiosis","type":"exact"},{"name":"cytokinesis involved in male meiotic cell cycle","type":"exact"}],"termid":"GO:0007112"}


id: FYPO:0007182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule depolymerization, i.e. the removal of tubulin dimers from a cytoplasmic microtubule, occurs to a lesser extent than normal at the plus end of the microtubule at the cell tip. Normally, rapid depolymerization takes place when the growing plus end of the microtubule reaches the cell tip.","definition_xrefs":["PMID:31276301","PomBase:mah","GO:0070462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased cytoplasmic microtubule depolymerization at plus end at cell tip","synonyms":[{"name":"decreased cytoplasmic microtubule depolymerisation at plus end at cell tip","type":"exact"},{"name":"decreased cytoplasmic microtubule depolymerization at plus end at cell end","type":"exact"},{"name":"decreased cytoplasmic microtubule depolymerization at plus end at cell tip during mitotic cell cycle","type":"related"},{"name":"decreased cytoplasmic microtubule depolymerization at plus end at cell tip during vegetative growth","type":"exact"},{"name":"decreased microtubule catastrophe at cell tip","type":"related"},{"name":"decreased microtubule plus end shrinkage at cell tip","type":"related"},{"name":"decreased plus-end specific microtubule depolymerization at cell tip","type":"exact"},{"name":"reduced cytoplasmic microtubule depolymerization at plus end at cell tip","type":"exact"}],"termid":"FYPO:0007182"}


id: GO:0006586
data:
  {"annotated_genes":["SJAG_03167","SJAG_05007","SJAG_02505","SJAG_01455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73651,74593,77545,79565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving indolalkylamines, indole or indole derivatives containing a primary, secondary, or tertiary amine group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine metabolic process","termid":"GO:0006576"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indolalkylamine metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"indolalkylamine metabolism","type":"exact"},{"name":"indolamine metabolic process","type":"broad"},{"name":"indolamine metabolism","type":"broad"}],"termid":"GO:0006586","terms_by_termid":{"GO:0000162":null}}


id: PBO:0051068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 4/OR15-4B (non-functional)","termid":"PBO:0051068"}


id: PBO:0071692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 24","termid":"PBO:0071692"}


id: PBO:0080241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 4","termid":"PBO:0080241"}


id: GO:0070070
data:
  {"annotated_genes":["SJAG_00771","SJAG_04454","SJAG_05306","SJAG_00301","SJAG_06514","SJAG_01939"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116938,102323,64326,64126,67661,110534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070072"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a proton-transporting V-type ATPase complex, proton-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of protons across a concentration gradient.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex assembly","termid":"GO:0070071"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00301":null,"SJAG_00771":null,"SJAG_01939":null,"SJAG_04454":null,"SJAG_05306":null,"SJAG_06514":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"proton-transporting V-type ATPase complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"V-ATPase assembly","type":"related"},{"name":"V-ATPase complex assembly","type":"related"}],"termid":"GO:0070070","terms_by_termid":{"GO:0070072":null}}


id: MONDO:0030337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutis laxa, autosomal recessive, type 2E","secondary_identifiers":["MEDGEN:1794154","UMLS:C5561944","OMIM:619451"],"synonyms":[{"name":"ARCL2E","type":"exact"},{"name":"cutis laxa, autosomal recessive, type 2E","type":"exact"},{"name":"cutis laxa, autosomal recessive, type IIE","type":"exact"}],"termid":"MONDO:0030337","xrefs":{"Monarch":{"xref_id":"0030337"}}}


id: PBO:0053982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1298","termid":"PBO:0053982"}


id: PBO:0036247
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COQ4","termid":"PBO:0036247"}


id: PBO:0074245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 66 member 1 like","termid":"PBO:0074245"}


id: MONDO:0010562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Colonic atresia is a congenital intestinal malformation resulting in a non-latent segment of the colon and characterized by lower intestinal obstruction manifesting with abdominal distention and failure to pass meconium in newborns.","definition_xrefs":["Orphanet:1198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colonic atresia","secondary_identifiers":["NCIT:C101024","SCTID:37054000","GARD:1446","MESH:C562562","MEDGEN:75605","UMLS:C0266190","HP:0010448","OMIM:303650"],"synonyms":[{"name":"atresia of colon","type":"exact"},{"name":"colon atresia","type":"exact"},{"name":"colonic atresia","type":"exact"},{"name":"colonic atresia (disease)","type":"exact"},{"name":"congenital atresia of colon","type":"exact"}],"termid":"MONDO:0010562","xrefs":{"Monarch":{"xref_id":"0010562"}}}


id: PBO:0049978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 2B","termid":"PBO:0049978"}


id: MONDO:1011568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, cattle","termid":"MONDO:1010862"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, non-human animal","termid":"MONDO:1011430"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, cattle","secondary_identifiers":["OMIA:000181-9913"],"termid":"MONDO:1011568","xrefs":{"Monarch":{"xref_id":"1011568"}}}


id: PR:O42997
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27B12.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.07","synonyms":[{"name":"Spom972h-SPBC27B12.07","type":"exact"}],"termid":"PR:O42997"}


id: GO:2000386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ovarian follicle development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of ovarian follicle development","termid":"GO:2000354"},{"relation_name":"positively_regulates","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of ovarian follicle development","synonyms":[{"name":"positive regulation of follicular phase","type":"related"}],"termid":"GO:2000386"}


id: GO:0060069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with the positioning of the mitotic spindle.","definition_xrefs":["GOC:bf","GOC:dph","PMID:11532397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"},{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"establishment of mitotic spindle localization","termid":"GO:0040001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0000226","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"Wnt signaling pathway, regulating spindle positioning","synonyms":[{"name":"Wnt receptor signaling pathway, regulating spindle positioning","type":"exact"},{"name":"Wnt receptor signalling pathway, regulating spindle positioning","type":"exact"},{"name":"Wnt-activated signaling pathway, regulating spindle positioning","type":"exact"},{"name":"non-canonical Wnt signaling pathway","type":"broad"}],"termid":"GO:0060069"}


id: PBO:0054420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1816","termid":"PBO:0054420"}


id: GO:0021532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that regulates the coordinated growth that establishes the non-random spatial arrangement of the neural tube.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:dgh","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"neural tube development","termid":"GO:0021915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural tube patterning","termid":"GO:0021532"}


id: PBO:0078935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 3-1","termid":"PBO:0078935"}


id: GO:0010413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylan, a polymer containing a beta-(1->4)-linked D-xylose backbone decorated with glucuronic acid side units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylan metabolic process","termid":"GO:0045491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"glucuronoxylan metabolic process","synonyms":[{"name":"glucuronoxylan metabolism","type":"exact"}],"termid":"GO:0010413"}


id: PBO:0087563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of spindle-assembly checkpoint complex; involved in delaying anaphase onset in cells with defects in mitotic spindle assembly; pseudosubstrate inhibitor of APC(Cdc20), the anaphase promoting complex involved in securin (Pds1p) turnover; MAD3 has a paralog, BUB1, that arose from the whole genome duplication","termid":"PBO:0087563"}


id: PBO:0017038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small-subunit processome, UTP-C complex subunit Utp22 (predicted)","termid":"PBO:0017038"}


id: GO:0018717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9-phenanthrol + glucose = 9-phenanthryl-beta-D-glucopyranoside + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 9-phenanthrol glycosyltransferase activity (obsolete GO:0018717)","termid":"GO:0018717"}


id: FYPO:0003040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of RNA splicing is decreased. All RNA splicing may be increased, or splicing of one or more specific RNA molecules may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA splicing, via spliceosome","termid":"FYPO:0002915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA splicing, via splicosome","synonyms":[{"name":"decreased RNA splicing during mitotic cell cycle","type":"related"},{"name":"decreased RNA splicing during vegetative growth","type":"exact"},{"name":"decreased RNA splicing, via transesterification reactions with bulged adenosine as nucleophile","type":"exact"},{"name":"reduced RNA splicing","type":"exact"}],"termid":"FYPO:0003040"}


id: GO:0052528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism increases the frequency, rate or extent of programmed cell death in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete upregulation by organism of symbiont programmed cell death (obsolete GO:0052528)","synonyms":[{"name":"enhancement of symbiont programmed cell death by organism","type":"exact"},{"name":"upregulation by organism of symbiont programmed cell death","type":"exact"}],"termid":"GO:0052528"}


id: GO:1905400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of activated CD4-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["GOC:TermGenie","PMID:24187568","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of activated CD4-positive, alpha-beta T cell apoptotic process","termid":"GO:1905399"},{"relation_name":"negatively_regulates","term_name":"activated CD4-positive, alpha-beta T cell apoptotic process","termid":"GO:1905398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activated CD4-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"down regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"down regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"down regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"down regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"inhibition of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T cell apoptotic process","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905400"}


id: MONDO:0008017
data:
  {"annotated_genes":["SJAG_02326","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85996,85997],"is_not":false,"summary":null,"term":"MONDO:0008017"}]},"cv_name":"mondo","definition":"A condition that affects the skin, hair, mucosa (areas ofthe body that are lined with mucus), gums (gingiva), eyes, nose and lungs. Symptoms typically begin in infancy and may include development of cataracts (clouding of the eye lens); blindness; hair loss (alopecia); abnormal changes to the perineum (the area between the anus and external genitalia); and small, skin-colored bumps (keratosis pilaris). Terminal lung disease has also been reported. The cause of HMD is thought to be an abnormality in desmosomes and gap junctions, which are structures involved in cell-to-cell contact. HMD typically follows autosomal dominant inheritance, but has occurred sporadically (in an individual who has no family history of the condition). Treatment typically focuses on individual symptoms of the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary mucoepithelial dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:1839","MEDGEN:220887","ICD9:478.79","icd11.foundation:1167609602","GARD:5427","SCTID:403442005","OMIM:158310","UMLS:C1274795","MESH:C536476"],"synonyms":[{"name":"HMD","type":"exact"},{"name":"Urban-Schosser-Spohn syndrome","type":"exact"},{"name":"mucoepithelial dysplasia, hereditary","type":"exact"}],"termid":"MONDO:0008017","terms_by_termid":{"MONDO:0008017":null},"xrefs":{"Monarch":{"xref_id":"0008017"}}}


id: MONDO:0019399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isaac's syndrome is an immune-mediated peripheral motor neuron disorder characterized by continuous muscle fiber activity at rest resulting in muscle stiffness, cramps, myokymia, and pseudomyotonia.","definition_xrefs":["Orphanet:84142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Isaac syndrome","secondary_identifiers":["MEDGEN:116151","icd11.foundation:646523932","NANDO:1200510","SCTID:305719002","UMLS:C0242287","GARD:6793"],"synonyms":[{"name":"Isaac's-Merten's syndrome","type":"related"},{"name":"Isaac-Mertens syndrome","type":"related"},{"name":"Isaacs' syndrome","type":"exact"},{"name":"Quantal squander syndrome","type":"exact"},{"name":"acquired neuromyotonia","type":"exact"},{"name":"continuous muscle fiber activity syndrome","type":"exact"},{"name":"continuous muscle fibre activity syndrome","type":"exact"},{"name":"neuromyotonia","type":"exact"},{"name":"peripheral nerve hyperexcitability","type":"exact"}],"termid":"MONDO:0019399","xrefs":{"Monarch":{"xref_id":"0019399"}}}


id: GO:0097298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of the nucleus.","definition_xrefs":["PMID:19366728","GOC:mah","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nucleus size","synonyms":[{"name":"regulation of nuclear size","type":"exact"},{"name":"regulation of nuclear volume","type":"exact"}],"termid":"GO:0097298"}


id: PBO:0066666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPOR family member 3","termid":"PBO:0066666"}


id: MONDO:0009328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiomatosis, cutaneous, with associated features","secondary_identifiers":["MEDGEN:67397","OMIM:234800","UMLS:C0220738","MESH:C562438"],"synonyms":[{"name":"hemangiomatosis, cutaneous, with associated features","type":"exact"}],"termid":"MONDO:0009328","xrefs":{"Monarch":{"xref_id":"0009328"}}}


id: FYPO:0000670
data:
  {"alleles_by_uniquename":{"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119562,119561,119563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000671"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid separation is abnormal. Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["PomBase:mah","GO:0051306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"part_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":3,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0000337","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid separation","references_by_uniquename":{"PMID:24184107":null},"single_locus_annotated_genes":["SJAG_03449"],"single_locus_genotype_uniquenames":["man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1delta"],"synonyms":[{"name":"abnormal mitotic chromosome separation","type":"exact"},{"name":"abnormal sister chromatid separation during mitosis","type":"exact"},{"name":"abnormal sister chromatid separation during mitotic cell cycle","type":"related"},{"name":"abnormal sister chromatid separation during vegetative growth","type":"exact"},{"name":"aneuploidy","type":"related"},{"name":"mitotic chromosome missegregation","type":"related"}],"termid":"FYPO:0000670","terms_by_termid":{"FYPO:0000671":null}}


id: FYPO:0006361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in heterochromatin at subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PMID:29214404","PMID:26438724","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at subtelomeres during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 dimethylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"increased histone H3K9me2 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006361"}


id: MONDO:0007022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic, destructive infection of the kidney characterized by lipid-laden macrophages in the setting of obstruction secondary to infected renal stones, most commonly caused by Proteus or Escherichia coli.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic pyelonephritis","termid":"MONDO:0001110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"xanthogranulomatous pyelonephritis","secondary_identifiers":["DOID:11401","EFO:1001244","ICD9:582.89","NCIT:C123038","UMLS:C0034188","SCTID:38898003","MEDGEN:19591","MedDRA:10074389","MESH:D011705"],"synonyms":[{"name":"xanthogranulomatous pyelonephritis","type":"exact"}],"termid":"MONDO:0007022","xrefs":{"Monarch":{"xref_id":"0007022"}}}


id: FYPO:0003030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mRNA splicing via the spliceosome is decreased, where introns have low A/U content and polypyrimidine tracts located approximately 17-19 nt distal to the branch site.","definition_xrefs":["PMID:24298023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased splicing of mRNA introns with low A/U content","termid":"FYPO:0003242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"decreased splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site","synonyms":[{"name":"decreased mRNA splicing, via spliceosome, introns with low A/U content and polypyrimidine tracts distal to branch site","type":"exact"},{"name":"decreased nuclear mRNA splicing, via spliceosome, introns with low A/U content and polypyrimidine tracts distal to branch site","type":"exact"},{"name":"decreased splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site","type":"broad"},{"name":"decreased splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site during mitotic cell cycle","type":"related"},{"name":"decreased splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site during vegetative growth","type":"exact"},{"name":"reduced splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site","type":"exact"}],"termid":"FYPO:0003030"}


id: GO:0005800
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete COPII vesicle (obsolete GO:0005800)","synonyms":[{"name":"COPII vesicle","type":"exact"}],"termid":"GO:0005800"}


id: GO:0003013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An organ system process carried out by any of the organs or tissues of the circulatory system. The circulatory system is an organ system that moves extracellular fluids to and from tissue within a multicellular organism.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circulatory system process","secondary_identifiers":["Wikipedia:Circulatory_system"],"termid":"GO:0003013"}


id: GO:0032129
data:
  {"annotated_genes":["SJAG_00581"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109842],"is_not":false,"summary":null,"term":"GO:0032129"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 9) + H2O = histone H3 L-lysine (position 9) + acetate. This reaction represents the removal of an acetyl group from lysine at position 9 of the histone H3 protein.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"},{"relation_name":"is_a","term_name":"histone deacetylase activity, hydrolytic mechanism","termid":"GO:0141221"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0033558"}],"interesting_parent_ids":["GO:0033558","GO:0003674","GO:0016787","GO:0003824","GO:0019213","GO:0140096","GO:0016810"],"is_obsolete":false,"name":"histone H3K9 deacetylase activity, hydrolytic mechanism","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K9 deacetylase activity","type":"exact"},{"name":"histone H3K9 deacetylase activity","type":"broad"},{"name":"histone deacetylase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0032129","terms_by_termid":{"GO:0032129":null}}


id: PBO:0048655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein delta 4","termid":"PBO:0048655"}


id: PBO:0066284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member H, pseudogene","termid":"PBO:0066284"}


id: MONDO:0001220
data:
  {"annotated_genes":["SJAG_04978"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"}]},"cv_name":"mondo","definition":"Hypoparathyroidism is an endocrine disorder in which the parathyroid glands in the neck do not produce enough parathyroid hormone (PTH). Common signs and symptoms include abdominal pain, brittle nails, cataracts, dry hair and skin, muscle cramps, tetany, pain in the face, legs, and feet, seizures, tingling sensation, and weakened tooth enamel (in children). It may be caused by injury to the parathyroid glands (e.g., during surgery). Other causes, include low blood magnesium levels, a side effect of radioactive iodine treatment for hyperthyroidism, metabolic alkalosis, DiGeorge syndrome, and type I polyglandular autoimmune syndrome. The goal of treatment is to restore the calcium and mineral balance in the body.","direct_ancestors":[{"relation_name":"is_a","term_name":"parathyroid gland disorder","termid":"MONDO:0001223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04978":null},"genotype_count":0,"is_obsolete":false,"name":"hypoparathyroidism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:252.1","EFO:0009451","GARD:6733","NANDO:1200775","NANDO:2200345","DOID:11199","icd11.foundation:1708733050","UMLS:C0020626","MESH:D007011","NANDO:2100124","MEDGEN:6985","NCIT:C78350","SCTID:36976004","ICD10CM:E20"],"synonyms":[{"name":"hypoparathyroidism, idiopathic (subtype)","type":"related"},{"name":"parathyroid, underactivity of","type":"related"}],"termid":"MONDO:0001220","terms_by_termid":{"MONDO:0011301":null},"xrefs":{"Monarch":{"xref_id":"0001220"}}}


id: PBO:0038467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 6","termid":"PBO:0038467"}


id: PBO:0036058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K8_and_H4-K16_acetylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0036058"}


id: PBO:0049305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase mu 5 pseudogene 1","termid":"PBO:0049305"}


id: GO:0032605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of hepatocyte growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:1838014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"},{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"hepatocyte growth factor production","secondary_identifiers":["GO:0048175"],"synonyms":[{"name":"HGF production","type":"exact"},{"name":"hepatocyte growth factor biosynthetic process","type":"narrow"},{"name":"scatter factor production","type":"exact"}],"termid":"GO:0032605"}


id: GO:0072368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of lipid transport by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0072368)","synonyms":[{"name":"regulation of lipid transport by negative regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072368"}


id: PBO:0084398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0084398"}


id: PBO:0058693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6821","termid":"PBO:0058693"}


id: GO:0075208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont modulates the frequency, rate or extent of cAMP-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host cAMP-mediated signal transduction (obsolete GO:0075208)","synonyms":[{"name":"modulation by symbiont of host cAMP-mediated signaling","type":"exact"}],"termid":"GO:0075208"}


id: MONDO:0006347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the pancreas. It is characterized by the presence of malignant large cells.","definition_xrefs":["NCIT:C95582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large cell neuroendocrine carcinoma","termid":"MONDO:0005057"},{"relation_name":"is_a","term_name":"exocrine pancreatic carcinoma","termid":"MONDO:0005192"},{"relation_name":"is_a","term_name":"pancreatic endocrine carcinoma","termid":"MONDO:0005893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic large cell neuroendocrine carcinoma","secondary_identifiers":["UMLS:C2987239","MEDGEN:459465","EFO:1000442"],"synonyms":[{"name":"large cell neuroendocrine carcinoma of pancreas","type":"exact"},{"name":"pancreas large cell neuroendocrine carcinoma","type":"exact"},{"name":"pancreatic large cell NEC","type":"exact"},{"name":"pancreatic large cell NEC G3","type":"exact"},{"name":"pancreatic large cell neuroendocrine carcinoma","type":"exact"}],"termid":"MONDO:0006347","xrefs":{"Monarch":{"xref_id":"0006347"}}}


id: PBO:0001421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ypt subfamily","termid":"PBO:0001421"}


id: PBO:0072194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 11","termid":"PBO:0072194"}


id: PBO:0052558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell lectin like receptor K1","termid":"PBO:0052558"}


id: PBO:0049025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 4","termid":"PBO:0049025"}


id: PBO:0054058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1400","termid":"PBO:0054058"}


id: PBO:0049141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic--pyruvic transaminase 2","termid":"PBO:0049141"}


id: PBO:0016585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ATXN10 ortholog","termid":"PBO:0016585"}


id: GO:0016682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a diphenol, or related compound, acts as a hydrogen or electron donor and reduces oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors","termid":"GO:0016679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","secondary_identifiers":["EC:1.10.3.-"],"synonyms":[{"name":"laccase activity","type":"related"}],"termid":"GO:0016682"}


id: MONDO:0006327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ocular sebaceous carcinoma is a rare condition and accounts for 1% to 5.5% of eyelid malignancies and is the third most common eyelid malignancy after basal cell and squamous cell carcinoma. It usually affects elderly women, has a high rate of local recurrence, and a tendency to regional and distant metastases.","definition_xrefs":["EFO:1000405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye carcinoma","termid":"MONDO:0002466"},{"relation_name":"is_a","term_name":"sebaceous adenocarcinoma","termid":"MONDO:0006962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"ocular sebaceous carcinoma","secondary_identifiers":["MEDGEN:317974","NCIT:C43340","UMLS:C1709308"],"synonyms":[{"name":"eye sebaceous carcinoma","type":"exact"},{"name":"ocular sebaceous carcinoma","type":"exact"}],"termid":"MONDO:0006327","xrefs":{"Monarch":{"xref_id":"0006327"}}}


id: PBO:0004503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght2","termid":"PBO:0004503"}


id: FYPO:0000295
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[119760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119527],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[119748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[119531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[120039,119742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[119847],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[119781],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[119749,119730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119528],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects cytoskeleton organization. Cytoskeleton organization results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures.","definition_xrefs":["PomBase:mah","GO:0007010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization phenotype","termid":"FYPO:0000334"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":10,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03596","SJAG_01143","SJAG_04280","SJAG_04522","SJAG_02392"],"name":"cytoskeleton organization phenotype","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_03596","SJAG_01143","SJAG_04703","SJAG_04280","SJAG_02592","SJAG_02392","SJAG_04522"],"single_locus_genotype_uniquenames":["cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","pom1delta","sty1delta","for3delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","mid1delta","rga4delta"],"synonyms":[{"name":"cytoskeleton organisation phenotype","type":"exact"},{"name":"fission yeast cytoskeleton organization phenotype","type":"exact"}],"termid":"FYPO:0000295","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0062709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily H member 1","termid":"PBO:0062709"}


id: PBO:0047954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, 5-azacytidine type, common, fra(19)(q13)","termid":"PBO:0047954"}


id: PBO:0042979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 5","termid":"PBO:0042979"}


id: PBO:0087965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter of the ATP-binding cassette (ABC) family; role in plasma membrane sterol incorporation; implicated in pleiotropic drug resistance; provides resistance to ethanol stress and contributes to a decreased intracellular accumulation of ethanol; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0087965"}


id: GO:0047902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formyl-L-aspartate + H2O = formate + L-aspartate.","definition_xrefs":["EC:3.5.1.8","MetaCyc:FORMYLASPARTATE-DEFORMYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"formylaspartate deformylase activity","secondary_identifiers":["RHEA:22040"],"synonyms":[{"name":"N-formyl-L-aspartate amidohydrolase activity","type":"related"},{"name":"formylaspartic formylase (formylase I, formylase II)","type":"related"}],"termid":"GO:0047902"}


id: PBO:0027507
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_acetone","termid":"PBO:0027507"}


id: GO:0050014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-erythrulose 1-phosphate = formaldehyde + glycerone phosphate.","definition_xrefs":["EC:4.1.2.2","RHEA:20932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ketotetrose-phosphate aldolase activity","secondary_identifiers":["KEGG_REACTION:R01014","MetaCyc:KETOTETROSE-PHOSPHATE-ALDOLASE-RXN"],"synonyms":[{"name":"erythrose-1-phosphate synthase activity","type":"related"},{"name":"erythrulose-1-phosphate formaldehyde-lyase (glycerone-phosphate-forming)","type":"related"},{"name":"erythrulose-1-phosphate formaldehyde-lyase activity","type":"related"},{"name":"erythrulose-1-phosphate synthetase activity","type":"related"},{"name":"phosphoketotetrose aldolase activity","type":"related"}],"termid":"GO:0050014"}


id: GO:0010456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of the dorsal spinal cord cell population.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in dorsal spinal cord","termid":"GO:0010456"}


id: GO:0045596
data:
  {"annotated_genes":["SJAG_02169","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[91051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell differentiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell differentiation","type":"exact"},{"name":"down-regulation of cell differentiation","type":"exact"},{"name":"downregulation of cell differentiation","type":"exact"},{"name":"inhibition of cell differentiation","type":"narrow"}],"termid":"GO:0045596","terms_by_termid":{"GO:0051517":null,"GO:0075297":null}}


id: MONDO:0002038
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A carcinoma that arises from the head and neck region. Representative examples include oral cavity squamous cell carcinoma, laryngeal squamous cell carcinoma, and salivary gland carcinoma.","definition_xrefs":["NCIT:C35850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"head and neck carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3887461","DOID:1542","MEDGEN:854345"],"synonyms":[{"name":"carcinoma of craniocervical region","type":"exact"},{"name":"carcinoma of head and neck","type":"exact"},{"name":"carcinoma of neck","type":"exact"},{"name":"carcinoma of the head and neck","type":"exact"},{"name":"carcinoma of the neck","type":"narrow"},{"name":"craniocervical region carcinoma","type":"exact"},{"name":"head and neck cancer","type":"related"},{"name":"head and neck carcinoma","type":"exact"},{"name":"neck carcinoma","type":"exact"}],"termid":"MONDO:0002038","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0002038"}}}


id: PBO:0050115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 25","termid":"PBO:0050115"}


id: GO:0004602
data:
  {"annotated_genes":["SJAG_04632","SJAG_01292","SJAG_05181"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89729,98282,99608],"is_not":false,"summary":null,"term":"GO:0004602"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 glutathione + hydrogen peroxide = oxidized glutathione + 2 H2O.","definition_xrefs":["PMID:36771108","EC:1.11.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01292":null,"SJAG_04632":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glutathione peroxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3323013","Reactome:R-HSA-2161791","MetaCyc:GLUTATHIONE-PEROXIDASE-RXN","Reactome:R-HSA-3341397","Reactome:R-HSA-3341277","GO:0016224","Reactome:R-HSA-2161959","Reactome:R-HSA-3343700","Reactome:R-HSA-2161999","Reactome:R-HSA-6799695","RHEA:16833","Reactome:R-HSA-71676","Reactome:R-HSA-2161946"],"synonyms":[{"name":"GSH peroxidase activity","type":"related"},{"name":"glutathione:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"non-selenium glutathione peroxidase activity","type":"narrow"},{"name":"reduced glutathione peroxidase activity","type":"related"},{"name":"selenium-glutathione peroxidase activity","type":"related"}],"termid":"GO:0004602","terms_by_termid":{"GO:0004602":null}}


id: GO:0017080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of a sodium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772"],"is_obsolete":false,"name":"sodium channel regulator activity","termid":"GO:0017080"}


id: MONDO:0016741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete teratoma of the central nervous system (obsolete MONDO:0016741)","termid":"MONDO:0016741","xrefs":{"Monarch":{"xref_id":"0016741"}}}


id: MONDO:0001083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic or acquired disorder characterized by impairment of the function of the proximal tubules of the kidney. It results in decreased reabsorption of electrolytes, glucose, amino acids, and other nutrients.","definition_xrefs":["NCIT:C3034"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"},{"relation_name":"is_a","term_name":"renal tubule disorder","termid":"MONDO:0021568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Fanconi renotubular syndrome","secondary_identifiers":["NANDO:2200187","UMLS:C0015624","MESH:D005198","MEDGEN:4653","SCTID:236466005","GARD:9120","DOID:1062","SCTID:40488004","NANDO:2100027"],"synonyms":[{"name":"De toni-Fanconi syndrome","type":"exact"},{"name":"De toni-debre-Fanconi syndrome","type":"exact"},{"name":"Fanconi syndrome","type":"exact"},{"name":"Fanconi's syndrome","type":"exact"},{"name":"Fanconi-de toni syndrome","type":"exact"},{"name":"Fanconi-de-toni syndrome","type":"exact"},{"name":"Lignac-Fanconi syndrome","type":"exact"},{"name":"adult Fanconi syndrome","type":"narrow"},{"name":"congenital Fanconi syndrome","type":"narrow"},{"name":"deToni Fanconi syndrome","type":"exact"},{"name":"infantile nephropathic cystinosis","type":"related"},{"name":"toni-debre-Fanconi syndrome","type":"related"}],"termid":"MONDO:0001083","xrefs":{"Monarch":{"xref_id":"0001083"}}}


id: PBO:0048932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLPH3 divergent transcript","termid":"PBO:0048932"}


id: GO:0003177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the pulmonary valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semi-lunar valve development","termid":"GO:1905314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary valve development","termid":"GO:0003177"}


id: PBO:0076047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin 1 pseudogene 2","termid":"PBO:0076047"}


id: MONDO:0014507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Catel-Manzke syndrome is a rare bone disease characterized by bilateral hyperphalangy and clinodactyly of the index finger typically in association with Pierre Robin sequence comprising micrognathia, cleft palate and glossoptosis.","definition_xrefs":["Orphanet:1388"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catel-Manzke syndrome","secondary_identifiers":["UMLS:C1844887","OMIM:616145","MESH:C535347","SCTID:722383001","icd11.foundation:1023183031","DOID:0081122","MEDGEN:375536","GARD:28","NORD:901","OMIM:302380"],"synonyms":[{"name":"CATMANS","type":"related"},{"name":"Catel Manzke Syndrome","type":"exact"},{"name":"Catel Manzke syndrome","type":"related"},{"name":"Catel-Manzke syndrome","type":"exact"},{"name":"Palatodigital syndrome Catel-Manzke type","type":"related"},{"name":"Palatodigital syndrome, Catel-Manzke type","type":"exact"},{"name":"Pierre Robin sequence-hyperphalangy-clinodactyly syndrome","type":"exact"},{"name":"Pierre Robin syndrome with hyperphalangy and clinodactyly","type":"related"},{"name":"Pierre Robin syndrome-hyperphalangy-clinodactyly syndrome","type":"exact"},{"name":"hyperphalangy-clinodactyly of index finger with Pierre Robin syndrome","type":"exact"},{"name":"index finger anomaly with Pierre Robin syndrome","type":"related"},{"name":"index finger anomaly-Pierre Robin syndrome","type":"exact"},{"name":"micrognathia digital syndrome","type":"exact"}],"termid":"MONDO:0014507","xrefs":{"Monarch":{"xref_id":"0014507"}}}


id: GO:0102096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-6-deoxy-beta-L-mannose + N-acetyl-alpha-D-glucosaminyl-diphospho-trans,octacis-decaprenol = dTDP(3-) + alpha-L-Rhap-(1->3)-alpha-D-GlcpNAc-1-diphospho-trans,octacis-decaprenol + H+.","definition_xrefs":["EC:2.4.1.289","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"decaprenyl-N-acetyl-alpha-D-glucosaminyl-pyrophosphate:dTDP-alpha-L-rhamnose rhamnosyltransferase activity","secondary_identifiers":["RHEA:34487","MetaCyc:RXN-11070"],"termid":"GO:0102096"}


id: PBO:0075369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 7","termid":"PBO:0075369"}


id: PBO:0090401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase, URM1 activating enzyme E1-type Uba42","termid":"PBO:0090401"}


id: MONDO:0018922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cold agglutinin disease is a type of autoimmune hemolytic anemia defined by the presence of cold autoantibodies (autoantibodies which are active at temperatures below 30B0C).","definition_xrefs":["Orphanet:56425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune hemolytic anemia, cold type","termid":"MONDO:0016450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"cold agglutinin disease","secondary_identifiers":["NANDO:2200618","SCTID:127055007","UMLS:C1264008","MEDGEN:688249","NANDO:1200307","GARD:6130","NORD:775"],"synonyms":[{"name":"CAD","type":"exact"},{"name":"CAS","type":"exact"},{"name":"anemia, hemolytic, cold antibody","type":"related"},{"name":"chronic cold agglutinin disease","type":"exact"},{"name":"cold agglutinin syndrome","type":"exact"},{"name":"cold antibody disease","type":"related"},{"name":"cold antibody hemolytic anaemia","type":"related"},{"name":"cold antibody hemolytic anemia","type":"related"}],"termid":"MONDO:0018922","xrefs":{"Monarch":{"xref_id":"0018922"}}}


id: GO:0009617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bacterium","secondary_identifiers":["GO:0009680","GO:0009618","Reactome:R-HSA-9824439"],"synonyms":[{"name":"response to bacteria","type":"exact"}],"termid":"GO:0009617"}


id: PBO:0057582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 887","termid":"PBO:0057582"}


id: GO:1902456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stomatal opening.","definition_xrefs":["GOC:TermGenie","PMID:23766366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stomatal movement","termid":"GO:0010119"},{"relation_name":"regulates","term_name":"stomatal opening","termid":"GO:1990069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stomatal opening","termid":"GO:1902456"}


id: PBO:0052855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 4-12","termid":"PBO:0052855"}


id: PR:O13961
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cut11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope protein ndc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1786.03","synonyms":[{"name":"Spom972h-cut11","type":"exact"},{"name":"cell untimely torn protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13961"}


id: PBO:0068194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 501","termid":"PBO:0068194"}


id: SO:0001505
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of sequences (often chromosomes) taken as the standard for a given organism and genome assembly.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genome","termid":"SO:0001026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reference_genome","synonyms":[{"name":"reference genome","type":"related"}],"termid":"SO:0001505"}


id: PBO:0079163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 32","termid":"PBO:0079163"}


id: GO:0141188
data:
  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id: PBO:0114352
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id: GO:1905008
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id: PBO:0080404
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id: GO:0070074
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id: GO:0000758
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id: PBO:0012545
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id: GO:1904952
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id: PBO:0051785
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id: PBO:0078963
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id: PBO:0067321
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id: GO:0047600
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id: PBO:0067017
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id: PBO:0056674
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id: GO:1903518
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id: MONDO:0000926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease that disrupts the process by which the vertebrate eye changes optical power to maintain a clear image or focus on an object as its distance varies.","definition_xrefs":["Wikipedia:Accommodation_(eye)"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"eye accommodation disease","secondary_identifiers":["ICD9:367.5","MEDGEN:508925","UMLS:C0152198","SCTID:54552008","DOID:10034"],"synonyms":[{"name":"disorder of accommodation","type":"exact"}],"termid":"MONDO:0000926","xrefs":{"Monarch":{"xref_id":"0000926"}}}


id: PR:Q09933
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dis1 gene.","definition_xrefs":["UniProtKB:Q09933","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoprotein p93 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.14","synonyms":[{"name":"Spom972h-dis1","type":"exact"}],"termid":"PR:Q09933"}


id: PBO:0047268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 246 member C (gene/pseudogene)","termid":"PBO:0047268"}


id: GO:0031161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphatidylinositol, any glycophospholipid with its sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"},{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylinositol catabolic process","synonyms":[{"name":"PtdIns catabolic process","type":"exact"},{"name":"PtdIns catabolism","type":"exact"},{"name":"phosphatidylinositol breakdown","type":"exact"},{"name":"phosphatidylinositol catabolism","type":"exact"},{"name":"phosphatidylinositol degradation","type":"exact"}],"termid":"GO:0031161"}


id: PBO:0048669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosidase alpha","termid":"PBO:0048669"}


id: PBO:0092031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine (ucg), mitochondrial","termid":"PBO:0092031"}


id: MONDO:0013273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"16p13.3 microduplication syndrome is a rare chromosomal anomaly syndrome resulting from a partial duplication of the short arm of chromosome 16 and manifesting with a variable phenotype which is mostly characterized by: mild to moderate intellectual deficit and developmental delay (particularly speech), normal growth, short, proximally implanted thumbs and other hand and feet malformations (such as camptodactyly, syndactyly, club feet), mild arthrogryposis and characteristic facies (upslanting, narrow palpebral fissures, hypertelorism, mid face hypoplasia, bulbous nasal tip and low set ears). Other reported manifestations include cryptorchidism, inguinal hernia and behavioral problems.","definition_xrefs":["Orphanet:96078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 16","termid":"MONDO:0016949"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16p13.3 duplication syndrome","secondary_identifiers":["UMLS:C3150708","GARD:10755","DOID:0060431","OMIM:613458","SCTID:733473000","MEDGEN:462058"],"synonyms":[{"name":"16p13.3 duplication","type":"related"},{"name":"16p13.3 microduplication syndrome","type":"exact"},{"name":"chromosome 16p13.3 duplication","type":"related"},{"name":"chromosome 16p13.3 duplication syndrome","type":"exact"},{"name":"chromosome 16p13.3 duplication syndrome, isolated cases","type":"exact"},{"name":"distal duplication 16p","type":"exact"},{"name":"distal trisomy 16p","type":"exact"},{"name":"dup(16)(p13.3)","type":"exact"},{"name":"interstitial 16p13.3 duplication","type":"related"},{"name":"telomeric duplication 16p","type":"exact"},{"name":"trisomy 16pter","type":"exact"}],"termid":"MONDO:0013273","xrefs":{"Monarch":{"xref_id":"0013273"}}}


id: PBO:0089244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase Shm1","termid":"PBO:0089244"}


id: MONDO:0016029
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant neoplasm of the sinonasal cavity, arising from the basal layers of olfactory neuroepithelial cells in the superior nasal vault, which usually occurs in the 5th to 6th decades of life and is characterized clinically by non-specific symptoms such as progressive ipsilateral nasal block, sinusitis, facial pain, intermittent headaches, hyposmia/dysosmia, rhinorrhea and epistaxis as well as proptosis, diplopia and excessive lacrimation due to orbital extension. With early treatment and in the absence of distant metastases, ENB appears to have a good prognosis (compared to other superior nasal malignancies), despite a high rate of cervical metastases.","definition_xrefs":["Orphanet:1957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"esthesioneuroblastoma","secondary_identifiers":["GARD:2197","SCTID:422886007","MEDGEN:60217","UMLS:C0206717"],"synonyms":[{"name":"olfactory neuroblastoma","type":"related"}],"termid":"MONDO:0016029","xrefs":{"Monarch":{"xref_id":"0016029"}}}


id: GO:0046542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of alpha-factor, one of the two yeast mating factors, out of a cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-factor export (obsolete GO:0046542)","synonyms":[{"name":"alpha-factor export","type":"exact"}],"termid":"GO:0046542"}


id: PBO:0079943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USH2A antisense RNA 2","termid":"PBO:0079943"}


id: PBO:0089470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ type DNA helicase Hrq1","termid":"PBO:0089470"}


id: PBO:0066402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regenerating family member 4","termid":"PBO:0066402"}


id: PBO:0076575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 3","termid":"PBO:0076575"}


id: GO:0048373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a lateral mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate determination","termid":"GO:0007500"},{"relation_name":"part_of","term_name":"lateral mesodermal cell fate commitment","termid":"GO:0048372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesodermal cell fate determination","synonyms":[{"name":"lateral mesoderm cell fate determination","type":"exact"},{"name":"lateral plate mesoderm cell fate determination","type":"exact"},{"name":"lateral plate mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048373"}


id: PBO:0013029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Cwf16","termid":"PBO:0013029"}


id: PBO:0004473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase (predicted)","termid":"PBO:0004473"}


id: GO:0052184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of hormones or growth regulators in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont hormone or growth regulator levels (obsolete GO:0052184)","synonyms":[{"name":"modulation by organism of symbiont hormone or growth regulator levels","type":"exact"}],"termid":"GO:0052184"}


id: GO:0015438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + teichoic acid(in) = ADP + phosphate + teichoic acid(out).","definition_xrefs":["PMID:7565096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type teichoic acid transporter activity","secondary_identifiers":["EC:7.5.2.4","GO:0015162","MetaCyc:3.6.3.40-RXN"],"synonyms":[{"name":"ABC-type teichoic-acid transporter","type":"exact"},{"name":"ATP-dependent teichoic acid transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled teichoic acid transmembrane transporter activity","type":"related"},{"name":"teichoic acid transmembrane transporter activity","type":"broad"},{"name":"teichoic-acid ABC transporter","type":"exact"},{"name":"teichoic-acid-transporting ATPase activity","type":"related"}],"termid":"GO:0015438"}


id: GO:0140765
data:
  {"annotated_genes":["SJAG_04039"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90379],"is_not":false,"summary":null,"term":"GO:0140765"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 56) + NAD+ + H2O = histone H3 L-lysine (position 56) + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group attached to a lysine residue in H3K56 to NAD, producing nicotinamide.","definition_xrefs":["PMID:30374165","PMID:23911928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity, NAD-dependent","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0033558"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016746","GO:0016740","GO:0033558","GO:0019213","GO:0003674"],"is_obsolete":false,"name":"histone H3K56 deacetylase activity, NAD-dependent","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD-dependent histone H3-K56 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone H3K56 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H3-K56 specific)","type":"exact"}],"termid":"GO:0140765","terms_by_termid":{"GO:0140765":null}}


id: PBO:0114347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid transmembrane transporter","termid":"PBO:0114347"}


id: GO:0043575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell is received and converted into a molecular signal.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to osmotic stress","termid":"GO:0006970"},{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of osmotic stimulus","termid":"GO:0043575"}


id: PBO:0047686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLRT2 antisense RNA 1","termid":"PBO:0047686"}


id: GO:0034703
data:
  {"annotated_genes":["SJAG_02564","SJAG_00836","SJAG_03925","SJAG_07003","SJAG_MIT37","SJAG_00438","SJAG_MIT15","SJAG_03114","SJAG_MIT09","SJAG_00915","SJAG_00542","SJAG_04122","SJAG_00985","SJAG_00133","SJAG_02105","SJAG_02598","SJAG_05229","SJAG_05204"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[108263,66851,60533,57875,119473,64541,67174,119468,60068,65280,67510,104020,57315,119462,95180,64038,116232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045259"},{"annotations":[74816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"An ion channel complex through which cations pass.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel complex","termid":"GO:0034702"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cation channel complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"termid":"GO:0034703","terms_by_termid":{"GO:0005891":null,"GO:0045259":null}}


id: FYPO:0005420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more iron assimilation RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Iron assimilation RNAs are transcribed from genes whose products are involved in any process in which iron is solubilized and transported into a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased level of iron assimilation gene mRNA during vegetative growth","synonyms":[{"name":"increased iron assimilation gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of iron assimilation gene RNA during vegetative growth","type":"exact"},{"name":"increased level of iron assimilation gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of iron assimilation gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005420"}


id: PBO:0043080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 10 subunit","termid":"PBO:0043080"}


id: PBO:0045655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox B","termid":"PBO:0045655"}


id: PBO:0074321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cell adhesion glycoprotein","termid":"PBO:0074321"}


id: PR:O14319
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dentin matrix acidic phosphoprotein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03051","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain-containing protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.02c","secondary_identifiers":["UniProtKB:O14319"],"synonyms":[{"name":"Spom972h-DMP1","type":"exact"}],"termid":"PR:O14319"}


id: GO:0047832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5D-5-O-methyl-chiro-inositol + NADP+ = 2D-5-O-methyl-2,3,5/4,6-pentahydroxycyclohexanone + H+ + NADPH.","definition_xrefs":["RHEA:20437","EC:1.1.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-pinitol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03498","MetaCyc:D-PINITOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"1D-3-O-methyl-chiro-inositol:NADP+ oxidoreductase activity","type":"related"},{"name":"5D-5-O-methyl-chiro-inositol:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047832"}


id: GO:0015141
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"}]},"cv_name":"molecular_function","definition":"Enables the transfer of succinate, the dianion of ethane dicarboxylic acid, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"succinate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity","type":"related"}],"termid":"GO:0015141","terms_by_termid":{"GO:0097434":null}}


id: MONDO:1011352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Radiation-induced disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation-induced disorder, non-human animal","termid":"MONDO:1011352","xrefs":{"Monarch":{"xref_id":"1011352"}}}


id: PBO:0078328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta variable 3","termid":"PBO:0078328"}


id: MONDO:1010620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Omphalocele that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"omphalocele, non-human animal","termid":"MONDO:1010067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalocele, horse","secondary_identifiers":["OMIA:000741-9796"],"termid":"MONDO:1010620","xrefs":{"Monarch":{"xref_id":"1010620"}}}


id: PBO:0043959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma D","termid":"PBO:0043959"}


id: MONDO:0000952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the hindlimb long bone.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer affecting bone of limb skeleton","termid":"MONDO:0024311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cancer of long bone of lower limb","secondary_identifiers":["ICD9:170.7","MEDGEN:757711","UMLS:C3265932","ICD10CM:C40.2","DOID:10149","SCTID:449627008"],"synonyms":[{"name":"cancer of hindlimb long bone","type":"exact"},{"name":"hindlimb long bone cancer","type":"exact"},{"name":"long bones of lower limb cancer","type":"related"},{"name":"malignant hindlimb long bone neoplasm","type":"exact"},{"name":"malignant neoplasm of hindlimb long bone","type":"exact"},{"name":"malignant neoplasm of long bones of leg","type":"exact"}],"termid":"MONDO:0000952","xrefs":{"Monarch":{"xref_id":"0000952"}}}


id: MONDO:1010230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatic encephalopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic encephalopathy, non-human animal","secondary_identifiers":["OMIA:000453"],"termid":"MONDO:1010230","xrefs":{"Monarch":{"xref_id":"1010230"}}}


id: PBO:0040671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell receptor associated protein 29","termid":"PBO:0040671"}


id: PBO:0025436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF5B Tif52 (predicted)","termid":"PBO:0025436"}


id: MONDO:0700005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characteristic in which the disease has an uncertain or unknown cause.","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic vs non-idiopathic","termid":"MONDO:0700004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic","secondary_identifiers":["icd11.foundation:894194405"],"termid":"MONDO:0700005","xrefs":{"Monarch":{"xref_id":"0700005"}}}


id: PBO:0091326
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.1424709delA","termid":"PBO:0091326"}


id: GO:0140618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 Fe3+-siderophore + NAD+ + H+ -> 2 Fe2+-siderophore + NADH.","definition_xrefs":["RHEA:15061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferric-chelate reductase activity","termid":"GO:0000293"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","termid":"GO:0016723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ferric-chelate reductase (NADH) activity","secondary_identifiers":["EC:1.16.1.7","MetaCyc:FERRIC-CHELATE-REDUCTASE-RXN"],"synonyms":[{"name":"NADH:Fe(3+) oxidoreductase activity","type":"exact"},{"name":"NADH:Fe3+ oxidoreductase activity","type":"exact"},{"name":"ferric chelate reductase activity","type":"broad"},{"name":"iron chelate reductase activity","type":"broad"}],"termid":"GO:0140618"}


id: MOD:00395
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by formation of a thioester bond between a cysteine thiol and either an alpha-carbonyl, as in S-(L-methionyl-L-cysteine), or a sidechain carbonyl, as in S-(L-isoglutamyl)-L-cysteine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"thioester crosslinked residues","termid":"MOD:00395"}


id: PR:P05733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3702 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P05733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.05c","synonyms":[{"name":"L37-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl3702","type":"exact"},{"name":"YL27 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P05733"}


id: GO:0086039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A calcium-transporting P-type ATPase activity involved in regulation of the plasma membrane potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type calcium transporter activity","termid":"GO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"P-type calcium transporter activity involved in regulation of cardiac muscle cell membrane potential","synonyms":[{"name":"calcium-transporting ATPase activity involved in regulation of cardiac muscle cell membrane potential","type":"exact"}],"termid":"GO:0086039"}


id: GO:0048375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lateral mesoderm cell fate determination.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate determination","termid":"GO:0048335"},{"relation_name":"is_a","term_name":"regulation of lateral mesodermal cell fate determination","termid":"GO:0048374"},{"relation_name":"negatively_regulates","term_name":"lateral mesodermal cell fate determination","termid":"GO:0048373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lateral mesodermal cell fate determination","synonyms":[{"name":"down regulation of lateral mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of lateral mesodermal cell fate determination","type":"exact"},{"name":"downregulation of lateral mesodermal cell fate determination","type":"exact"},{"name":"inhibition of lateral mesodermal cell fate determination","type":"narrow"},{"name":"negative regulation of lateral plate mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048375"}


id: PBO:0035751
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_tryptophan","termid":"PBO:0035751"}


id: PBO:0050165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 21","termid":"PBO:0050165"}


id: GO:0061498
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Structure between the central and outer plaques of the mitotic spindle pole body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate layer of spindle pole body","termid":"GO:0005821"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005816","GO:0005575"],"is_obsolete":false,"name":"intermediate layer of mitotic spindle pole body","termid":"GO:0061498"}


id: PBO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PI31 proteasome inhibitor (predicted)","termid":"PBO:0002206"}


id: PBO:0050454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homer scaffold protein 2","termid":"PBO:0050454"}


id: PBO:0117190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF2AK3 antisense RNA 1","termid":"PBO:0117190"}


id: GO:0001697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gastric acid induced by the interaction of histamine with H2 type receptor receptors with subsequent activation of adenylate cyclase and elevation of intracellular cyclic AMP.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric acid secretion","termid":"GO:0001696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"histamine-induced gastric acid secretion","termid":"GO:0001697"}


id: PBO:0081353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 175","termid":"PBO:0081353"}


id: PBO:0047610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin homology 2 domain containing 1","termid":"PBO:0047610"}


id: PBO:0090952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin-interacting protein, BFC/FNIP-Folliculin complex subunit subunit Fnp1","termid":"PBO:0090952"}


id: PBO:0069860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1147, pseudogene","termid":"PBO:0069860"}


id: GO:1902324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methyl-branched fatty acid biosynthetic process.","definition_xrefs":["PMID:15340492","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fatty acid biosynthetic process","termid":"GO:0045723"},{"relation_name":"is_a","term_name":"regulation of methyl-branched fatty acid biosynthetic process","termid":"GO:1902322"},{"relation_name":"positively_regulates","term_name":"methyl-branched fatty acid biosynthetic process","termid":"GO:1902321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of methyl-branched fatty acid biosynthetic process","synonyms":[{"name":"activation of methyl-branched fatty acid anabolism","type":"narrow"},{"name":"activation of methyl-branched fatty acid biosynthesis","type":"narrow"},{"name":"activation of methyl-branched fatty acid biosynthetic process","type":"narrow"},{"name":"activation of methyl-branched fatty acid formation","type":"narrow"},{"name":"activation of methyl-branched fatty acid synthesis","type":"narrow"},{"name":"positive regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"positive regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"positive regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"positive regulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"up regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"up regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"up regulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"up regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"up regulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"up-regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"up-regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"up-regulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"up-regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"up-regulation of methyl-branched fatty acid synthesis","type":"exact"},{"name":"upregulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"upregulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"upregulation of methyl-branched fatty acid biosynthetic process","type":"exact"},{"name":"upregulation of methyl-branched fatty acid formation","type":"exact"},{"name":"upregulation of methyl-branched fatty acid synthesis","type":"exact"}],"termid":"GO:1902324"}


id: FYPO:0006824
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body begins earlier than normal.","definition_xrefs":["PMID:12479804","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"premature protein localization to mitotic spindle pole body","synonyms":[{"name":"advanced protein localization to mitotic spindle pole body","type":"exact"},{"name":"precocious protein localization to mitotic spindle pole body","type":"related"},{"name":"premature protein localisation to mitotic spindle pole body","type":"exact"},{"name":"premature protein localization to mitotic SPB","type":"exact"},{"name":"premature protein localization to spindle pole body during mitotic cell cycle","type":"related"},{"name":"premature protein localization to spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0006824"}


id: PBO:0043291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 10A","termid":"PBO:0043291"}


id: MONDO:0006016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete West Nile encephalitis (obsolete MONDO:0006016)","termid":"MONDO:0006016","xrefs":{"Monarch":{"xref_id":"0006016"}}}


id: MONDO:0003521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete VIPoma (obsolete MONDO:0003521)","termid":"MONDO:0003521","xrefs":{"Monarch":{"xref_id":"0003521"}}}


id: FYPO:0000775
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[119896,119900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[119890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_04551":null},"genotype_count":4,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein phosphorylation during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787","SJAG_00610","SJAG_04551"],"single_locus_genotype_uniquenames":["pck1delta","pck2delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal protein phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000775","terms_by_termid":{"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null}}


id: MONDO:0015392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nasal glial heterotopia is a rare developmental abnormality presenting usually at birth or in early childhood (rarely in adulthood) as a benign, non-pulsatile mass that can lead to nasal obstruction, deformation of the septum and nasal bone, and respiratory distress if untreated. Nasal glial heterotopias have no communication with the central nervous system; however an associated defect in the cribriform plate is sometimes reported.","definition_xrefs":["Orphanet:141112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal glial heterotopia","secondary_identifiers":["SCTID:5645008","icd11.foundation:1449384774","UMLS:C0266490","ICD9:748.1","GARD:19949","MEDGEN:539951"],"synonyms":[{"name":"nasal glioma","type":"exact"}],"termid":"MONDO:0015392","xrefs":{"Monarch":{"xref_id":"0015392"}}}


id: MONDO:0016608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality in which the occipitofrontal circumference is greater than two standard deviations above the mean for a given age. It is associated with hydrocephalus; subdural effusion; arachnoid cysts; or is part of a genetic condition (e.g., alexander disease; sotos syndrome).","definition_xrefs":["MESH:D058627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megalencephaly","secondary_identifiers":["MedDRA:10050183","GARD:16601","SCTID:9740002","UMLS:C0221355","ICD9:742.4","Orphanet:2477","MEDGEN:65141","icd11.foundation:368780653","HP:0001355"],"synonyms":[{"name":"macroencephaly","type":"exact"},{"name":"megalencephaly","type":"exact"},{"name":"megalencephaly (disease)","type":"exact"}],"termid":"MONDO:0016608","xrefs":{"Monarch":{"xref_id":"0016608"}}}


id: RO:0002218
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has participant y if and only if x realizes some active role that inheres in y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_active_participant","termid":"RO:0002218"}


id: PBO:0065176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominin 2","termid":"PBO:0065176"}


id: PBO:0074107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 28 member 3","termid":"PBO:0074107"}


id: PBO:0000338
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MAC1","termid":"PBO:0000338"}


id: PBO:0077855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 1","termid":"PBO:0077855"}


id: GO:0047685
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + an amine = adenosine 3',5'-bisphosphate + a sulfamate.","definition_xrefs":["EC:2.8.2.3","MetaCyc:ARYLAMINE-SULFOTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"amine sulfotransferase activity","secondary_identifiers":["RHEA:24136"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:amine N-sulfotransferase activity","type":"related"},{"name":"amine N-sulfotransferase activity","type":"related"},{"name":"amine sulphotransferase activity","type":"exact"},{"name":"arylamine sulfotransferase activity","type":"exact"}],"termid":"GO:0047685"}


id: MONDO:0019566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Klippel-Trenaunay syndrome (obsolete MONDO:0019566)","termid":"MONDO:0019566","xrefs":{"Monarch":{"xref_id":"0019566"}}}


id: GO:1901659
data:
  {"annotated_genes":["SJAG_03881","SJAG_01781","SJAG_05334","SJAG_01261","SJAG_00134","SJAG_04735","SJAG_02179","SJAG_04264","SJAG_00044","SJAG_01859","SJAG_05029","SJAG_04265","SJAG_01070","SJAG_06634","SJAG_03096","SJAG_00694"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[117226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[70213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[70214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[70215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[98916,98915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043174"},{"annotations":[73855,94086,61981,66911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[98069,114198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[73722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"},{"annotations":[72641,95035,75078,74054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031591"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosyl compound.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"},{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_01070":null,"SJAG_01261":null,"SJAG_01781":null,"SJAG_01859":null,"SJAG_02179":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_04264":null,"SJAG_04265":null,"SJAG_04735":null,"SJAG_05029":null,"SJAG_05334":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosyl compound biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"glycosyl compound anabolism","type":"exact"},{"name":"glycosyl compound biosynthesis","type":"exact"},{"name":"glycosyl compound formation","type":"exact"},{"name":"glycosyl compound synthesis","type":"exact"}],"termid":"GO:1901659","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0031591":null,"GO:0043097":null,"GO:0043174":null,"GO:0046086":null,"GO:0046132":null,"GO:0071590":null,"GO:0071592":null}}


id: PBO:0081698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 620","termid":"PBO:0081698"}


id: PBO:0080510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WARS2 intronic transcript 1","termid":"PBO:0080510"}


id: PBO:0012561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase Stp1","termid":"PBO:0012561"}


id: PBO:0041919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 3","termid":"PBO:0041919"}


id: PBO:0047375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 6","termid":"PBO:0047375"}


id: MONDO:0859381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, dilated, 100","secondary_identifiers":["MEDGEN:1840927","UMLS:C5830291","OMIM:620247"],"termid":"MONDO:0859381","xrefs":{"Monarch":{"xref_id":"0859381"}}}


id: PBO:0074584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 2C","termid":"PBO:0074584"}


id: GO:0036068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors, which occur in the absence of light.","definition_xrefs":["GOC:yaf","PMID:12242396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"light-independent chlorophyll biosynthetic process","synonyms":[{"name":"light independent chlorophyll biosynthetic process","type":"exact"},{"name":"light-independent chlorophyll anabolism","type":"exact"},{"name":"light-independent chlorophyll biosynthesis","type":"exact"},{"name":"light-independent chlorophyll formation","type":"exact"},{"name":"light-independent chlorophyll synthesis","type":"exact"}],"termid":"GO:0036068"}


id: PBO:0070466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 1","termid":"PBO:0070466"}


id: GO:0019867
data:
  {"annotated_genes":["SJAG_03345","SJAG_03328","SJAG_03416","SJAG_00569","SJAG_02265","SJAG_01951","SJAG_05259","SJAG_02355","SJAG_00754","SJAG_02361","SJAG_00948","SJAG_00699","SJAG_04370","SJAG_00605","SJAG_01134","SJAG_00999","SJAG_04203","SJAG_00235","SJAG_03175","SJAG_00265","SJAG_03415","SJAG_00810","SJAG_00031","SJAG_00655","SJAG_00428","SJAG_04996","SJAG_00368","SJAG_01929","SJAG_03710","SJAG_05268","SJAG_01260","SJAG_01312","SJAG_00880","SJAG_02641","SJAG_03464","SJAG_04732","SJAG_01305","SJAG_01357","SJAG_00048","SJAG_00812","SJAG_03358","SJAG_04759","SJAG_01780","SJAG_03435","SJAG_02848","SJAG_01212","SJAG_01900","SJAG_02084","SJAG_04072","SJAG_04270","SJAG_03502","SJAG_02543","SJAG_03515"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89574,116156,105165],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036266"},{"annotations":[101681,102844,106949,116157,106156,105166,100864,104811,118069,89577,106287,99588],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032473"},{"annotations":[80412,75125,117002,70276,70355],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032865"},{"annotations":[107573],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031315"},{"annotations":[110778,112167],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140595"},{"annotations":[88547,92235,96426,102797,104702,106349,71283,108069,89369,101805,73083,92476,72862,104961,75064,72035,92265,95774,103102,119177,109655,73931,117975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005741"},{"annotations":[79466,91220,99757,106535,63883,70871],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005742"},{"annotations":[88846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005640"},{"annotations":[73749,90694,62092,70354],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001401"}]},"cv_name":"cellular_component","definition":"The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00048":null,"SJAG_00235":null,"SJAG_00265":null,"SJAG_00368":null,"SJAG_00428":null,"SJAG_00569":null,"SJAG_00605":null,"SJAG_00655":null,"SJAG_00699":null,"SJAG_00754":null,"SJAG_00810":null,"SJAG_00812":null,"SJAG_00880":null,"SJAG_00948":null,"SJAG_00999":null,"SJAG_01134":null,"SJAG_01212":null,"SJAG_01260":null,"SJAG_01305":null,"SJAG_01312":null,"SJAG_01357":null,"SJAG_01780":null,"SJAG_01900":null,"SJAG_01929":null,"SJAG_01951":null,"SJAG_02084":null,"SJAG_02265":null,"SJAG_02355":null,"SJAG_02361":null,"SJAG_02543":null,"SJAG_02641":null,"SJAG_02848":null,"SJAG_03175":null,"SJAG_03328":null,"SJAG_03345":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03416":null,"SJAG_03435":null,"SJAG_03464":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03710":null,"SJAG_04072":null,"SJAG_04203":null,"SJAG_04270":null,"SJAG_04370":null,"SJAG_04732":null,"SJAG_04759":null,"SJAG_04996":null,"SJAG_05259":null,"SJAG_05268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"outer membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0019867","terms_by_termid":{"GO:0001401":null,"GO:0005640":null,"GO:0005741":null,"GO:0005742":null,"GO:0031315":null,"GO:0032473":null,"GO:0032865":null,"GO:0036266":null,"GO:0140595":null}}


id: MONDO:0015224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of poisoning that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare intoxication (obsolete MONDO:0015224)","secondary_identifiers":["Orphanet:108999"],"synonyms":[{"name":"rare poisoning","type":"exact"}],"termid":"MONDO:0015224","xrefs":{"Monarch":{"xref_id":"0015224"}}}


id: PBO:0085838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YBR197C is not an essential gene; relative distribution to the nucleus increases upon DNA replication stress; YBR197C has a paralog, YPL077C, that arose from the whole genome duplication","termid":"PBO:0085838"}


id: PBO:0000667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-5 sterol desaturase Erg31","termid":"PBO:0000667"}


id: PBO:0083898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of thenuclear pore complex (NPC) permeability barrier; possible karyopherin release factor that accelerates release of karyopherin-cargo complexes after transport across NPC; both NUP1 and NUP60 are homologous to human NUP153","termid":"PBO:0083898"}


id: PBO:0001083
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"active site mapping","termid":"PBO:0001083"}


id: MONDO:0007431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dens in dente and palatal invaginations","secondary_identifiers":["UMLS:C1852250","MESH:C538211","OMIM:125300","MEDGEN:377628"],"synonyms":[{"name":"dens in dente and palatal INVAGINATIONS","type":"related"}],"termid":"MONDO:0007431","xrefs":{"Monarch":{"xref_id":"0007431"}}}


id: PBO:0061790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 2","termid":"PBO:0061790"}


id: GO:0110057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood vessel endothelial cell differentiation.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","PMID:23072816","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell differentiation","termid":"GO:0045601"},{"relation_name":"regulates","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood vessel endothelial cell differentiation","termid":"GO:0110057"}


id: GO:0090208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving triglyceride, any triester of glycerol.","definition_xrefs":["GOC:dph","GOC:sl","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"is_a","term_name":"regulation of triglyceride metabolic process","termid":"GO:0090207"},{"relation_name":"positively_regulates","term_name":"triglyceride metabolic process","termid":"GO:0006641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of triglyceride metabolic process","termid":"GO:0090208"}


id: SO:0000076
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when the 3' region overlaps with another gene's 5' region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_five_prime_overlap","synonyms":[{"name":"5' 3' overlap","type":"exact"},{"name":"three prime five prime overlap","type":"exact"}],"termid":"SO:0000076"}


id: MONDO:0000701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the colon due to colonic ischemia resulting from alterations in systemic circulation or local vasculature.","definition_xrefs":["MESH:D017091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colitis","termid":"MONDO:0005292"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"ischemic colitis","secondary_identifiers":["UMLS:C0162529","DOID:0060181","MEDGEN:57930","SCTID:30588004"],"synonyms":[{"name":"colonic ischemia","type":"related"}],"termid":"MONDO:0000701","xrefs":{"Monarch":{"xref_id":"0000701"}}}


id: GO:0030580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a methyl group from S-adenosylmethionine during the synthesis of quinone cofactors such as ubiquinone (coenzyme Q), menaquinone (vitamin K2), plastoquinone and phylloquinone (vitamin K1).","definition_xrefs":["GOC:mb"],"gene_count":0,"genotype_count":0,"name":"obsolete quinone cofactor methyltransferase activity (obsolete GO:0030580)","termid":"GO:0030580"}


id: PBO:0039194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-hook transcription factor","termid":"PBO:0039194"}


id: GO:0045037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The targeting and import of proteins into the chloroplast stroma. Import depends on ATP hydrolysis catalyzed by stromal chaperones. Chloroplast stromal proteins, such as the S subunit of rubisco, have a N-terminal stromal-import sequence of about 44 amino acids which is cleaved from the protein precursor after import.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"},{"relation_name":"is_a","term_name":"establishment of protein localization to chloroplast","termid":"GO:0072596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein import into chloroplast stroma","synonyms":[{"name":"chloroplast stroma protein import","type":"exact"},{"name":"protein transport into chloroplast stroma","type":"exact"}],"termid":"GO:0045037"}


id: PBO:0069952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1245, pseudogene","termid":"PBO:0069952"}


id: MONDO:0014762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any visceral heterotaxy in which the cause of the disease is a mutation in the MMP21 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 7, autosomal","secondary_identifiers":["OMIM:616749","MEDGEN:902629","UMLS:C4225217"],"synonyms":[{"name":"HTX7","type":"exact"},{"name":"MMP21 visceral heterotaxy","type":"exact"},{"name":"heterotaxy, visceral, 7, autosomal","type":"exact"},{"name":"heterotaxy, visceral, 7, autosomal; HTX7","type":"exact"},{"name":"visceral heterotaxy caused by mutation in MMP21","type":"exact"}],"termid":"MONDO:0014762","xrefs":{"Monarch":{"xref_id":"0014762"}}}


id: SO:0001067
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence motif is a short (up to 20 amino acids) region of biological interest. Such motifs, although they are too short to constitute functional domains, share sequence similarities and are conserved in different proteins. They display a common function (protein-binding, subcellular location etc.).","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_region","termid":"SO:0100021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_motif","secondary_identifiers":["BS:00032"],"synonyms":[{"name":"motif","type":"broad"},{"name":"polypeptide motif","type":"exact"}],"termid":"SO:0001067"}


id: MONDO:0017787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"erythroderma desquamativum","secondary_identifiers":["GARD:6878","HGNC:1331","UMLS:C5551904","MEDGEN:1790529","MESH:C535512","Orphanet:314"],"synonyms":[{"name":"Leiner disease","type":"exact"},{"name":"Leiner-Moussous desquamative erythroderma","type":"related"},{"name":"erythroderma desquamativa of Leiner","type":"related"},{"name":"erythroderma desquamativum of infancy","type":"related"},{"name":"generalised erythroderma, diarrhea, and failure to thrive","type":"related"},{"name":"generalized erythroderma, diarrhea, and failure to thrive","type":"related"}],"termid":"MONDO:0017787","xrefs":{"Monarch":{"xref_id":"0017787"}}}


id: MONDO:0005459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic disorder caused by protozoa of the Trypanosoma brucei species. It is transmitted by flies and is endemic in various regions of Sub-Saharan Africa. Signs and symptoms include fever, joint pain, headache, and significant swelling of the lymph nodes. If left untreated, the parasitic infection causes anemia, heart, kidney, and endocrine failure, and neurologic damage. Subsequently patients develop confusion, disruption of the sleep cycle, and mental deterioration. The infection may lead to coma and death.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trypanosomiasis","termid":"MONDO:0000940"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human African trypanosomiasis","secondary_identifiers":["GARD:7826","SCTID:27031003","UMLS:C0041228","EFO:0005225","Orphanet:3385","MEDGEN:21714","DOID:10112","NCIT:C84541","MONDO:0018073","ICD9:086.5","MESH:D014353","MedDRA:10001461"],"synonyms":[{"name":"Africam sleeping sickness","type":"exact"},{"name":"African sleeping sickness","type":"exact"},{"name":"African trypanosomiasis","type":"exact"},{"name":"sleeping sickness","type":"exact"}],"termid":"MONDO:0005459","xrefs":{"Monarch":{"xref_id":"0005459"}}}


id: GO:1901672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of systemic acquired resistance.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"regulation of systemic acquired resistance","termid":"GO:0010112"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"positively_regulates","term_name":"systemic acquired resistance","termid":"GO:0009627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of systemic acquired resistance","synonyms":[{"name":"activation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"activation of systemic acquired resistance","type":"narrow"},{"name":"positive regulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"up regulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"up regulation of systemic acquired resistance","type":"exact"},{"name":"up-regulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"up-regulation of systemic acquired resistance","type":"exact"},{"name":"upregulation of salicylic acid-dependent systemic resistance","type":"exact"},{"name":"upregulation of systemic acquired resistance","type":"exact"}],"termid":"GO:1901672"}


id: PBO:0047664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase like","termid":"PBO:0047664"}


id: PBO:0002267
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.2","termid":"PBO:0002267"}


id: PBO:0039234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKTIP pseudogene 3","termid":"PBO:0039234"}


id: MONDO:0002905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The inability to generate oral-verbal expression, despite normal comprehension of speech. This may be associated with brain diseases or mental disorders. Organic mutism may be associated with damage to the frontal lobe; brain stem; thalamus; and cerebellum. Selective mutism is a psychological condition that usually affects children characterized by continuous refusal to speak in social situations by a child who is able and willing to speak to selected persons. Kussmal aphasia refers to mutism in psychosis.","definition_xrefs":["MESH:D009155","PMID:7959517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"speech disorder","termid":"MONDO:0004730"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutism","secondary_identifiers":["UMLS:C0026884","HP:0002300","icd11.foundation:1275861519","DOID:4189","MEDGEN:6476"],"synonyms":[{"name":"mutism","type":"exact"},{"name":"mutism (disease)","type":"exact"}],"termid":"MONDO:0002905","xrefs":{"Monarch":{"xref_id":"0002905"}}}


id: PBO:0000478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein (predicted)","termid":"PBO:0000478"}


id: MONDO:0100426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A characteristic of a diseae which results from diagnostic and therapeutic procedures undertaken on a patient.","definition_xrefs":["PMID:27407693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iatrogenic or non-iatrogenic","termid":"MONDO:0100369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iatrogenic","secondary_identifiers":["icd11.foundation:4953745"],"termid":"MONDO:0100426","xrefs":{"Monarch":{"xref_id":"0100426"}}}


id: GO:0004106
data:
  {"annotated_genes":["SJAG_00518"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75367],"is_not":false,"summary":null,"term":"GO:0004106"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: chorismate = prephenate.","definition_xrefs":["EC:5.4.99.5","RHEA:13897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00518":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"chorismate mutase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01715","MetaCyc:CHORISMATEMUT-RXN"],"synonyms":[{"name":"chorismate pyruvatemutase activity","type":"related"},{"name":"hydroxyphenylpyruvate synthase activity","type":"broad"}],"termid":"GO:0004106","terms_by_termid":{"GO:0004106":null}}


id: PBO:0053959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1266","termid":"PBO:0053959"}


id: GO:0044738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism negatively regulates the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of acid-sensing ion channel in another organism (obsolete GO:0044738)","synonyms":[{"name":"negative regulation of ASIC channel in other organism","type":"exact"},{"name":"negative regulation of acid-sensing ion channel in other organism","type":"exact"}],"termid":"GO:0044738"}


id: GO:0019196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of galactosamine from one side of a membrane to the other. Galactosamine is an aminodeoxysugar; D-galactosamine is a constituent of some glycolipids and glycosaminoglycans, commonly as its N-acetyl derivative.","definition_xrefs":["ISBN:0198506732","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"galactosamine transmembrane transporter activity","secondary_identifiers":["GO:0019195"],"synonyms":[{"name":"galactosamine porter activity","type":"exact"}],"termid":"GO:0019196"}


id: MONDO:0010499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ritscher-Schinzel syndrome in which the cause of the disease is a mutation in the CCDC22 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ritscher-Schinzel syndrome","termid":"MONDO:0019078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"Ritscher-Schinzel syndrome 2","secondary_identifiers":["MEDGEN:897005","GARD:15278","DOID:0060572","OMIM:300963","UMLS:C4225419"],"synonyms":[{"name":"CCDC22 Ritscher-Schinzel syndrome","type":"exact"},{"name":"RTSC2","type":"exact"},{"name":"Ritscher-Schinzel syndrome 2","type":"exact"},{"name":"Ritscher-Schinzel syndrome 2, X-linked recessive","type":"exact"},{"name":"Ritscher-Schinzel syndrome caused by mutation in CCDC22","type":"exact"},{"name":"Ritscher-Schinzel syndrome type 2","type":"exact"}],"termid":"MONDO:0010499","xrefs":{"Monarch":{"xref_id":"0010499"}}}


id: PBO:0044763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 46","termid":"PBO:0044763"}


id: MONDO:0017031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary interstitial lung disease in childhood and adulthood (obsolete MONDO:0017031)","secondary_identifiers":["Orphanet:264762"],"synonyms":[{"name":"primary ILD in childhood and adulthood","type":"exact"}],"termid":"MONDO:0017031","xrefs":{"Monarch":{"xref_id":"0017031"}}}


id: PR:P87061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea1 gene.","definition_xrefs":["UniProtKB:P87061","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tip elongation aberrant protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.06","synonyms":[{"name":"Spom972h-tea1","type":"exact"},{"name":"altered polarity protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cell polarity protein tea1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87061"}


id: GO:0016612
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex containing a molybdenum-iron cluster found in many species. It is composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase, the molybdenum-iron protein, is tetrameric with an alpha2-beta2 structure, and nitrogenase reductase is a homodimer.","definition_xrefs":["PMID:11566366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogenase complex","termid":"GO:0016610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"molybdenum-iron nitrogenase complex","synonyms":[{"name":"molybdenum-iron nitrogenase activity","type":"related"}],"termid":"GO:0016612"}


id: MONDO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete emphysema (obsolete MONDO:0000121)","termid":"MONDO:0000121","xrefs":{"Monarch":{"xref_id":"0000121"}}}


id: GO:0071034
data:
  {"annotated_genes":["SJAG_00701","SJAG_01064","SJAG_04360","SJAG_04321","SJAG_02622","SJAG_01830","SJAG_03984","SJAG_03745","SJAG_01521","SJAG_03939"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75432,78036],"is_not":false,"summary":null,"term":"GO:0071034"},{"annotations":[112233,113140,70714,71274,103332,115762,100108,118518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071039"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cryptic unstable transcripts (CUTs).","definition_xrefs":["GOC:krc","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CUT metabolic process","termid":"GO:0071043"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00701":null,"SJAG_01064":null,"SJAG_01521":null,"SJAG_01830":null,"SJAG_02622":null,"SJAG_03745":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04321":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CUT catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cryptic unstable transcript catabolic process","type":"exact"}],"termid":"GO:0071034","terms_by_termid":{"GO:0071034":null,"GO:0071039":null}}


id: FYPO:0003487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cut phenotype that is observed when a cell is exposed to ionizing radiation. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cut during cellular response to ionizing radiation (obsolete FYPO:0003487)","synonyms":[{"name":"cut during cellular response to IR","type":"exact"},{"name":"cut during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"cut during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0003487"}


id: PATO:0001416
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration which has regular start and/or end times.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regular duration","termid":"PATO:0001416"}


id: PBO:0059041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 28","termid":"PBO:0059041"}


id: MONDO:1011339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Obstetric disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obstetric disorder, non-human animal","termid":"MONDO:1011339","xrefs":{"Monarch":{"xref_id":"1011339"}}}


id: GO:0048207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which vesicles are directed to specific destination membranes during transport from the rough endoplasmic reticulum to the cis-Golgi.","definition_xrefs":["GOC:jid","PMID:10219233","GOC:mah","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle targeting, to, from or within Golgi","termid":"GO:0048199"},{"relation_name":"part_of","term_name":"endoplasmic reticulum to Golgi vesicle-mediated transport","termid":"GO:0006888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"vesicle targeting, rough ER to cis-Golgi","synonyms":[{"name":"rough ER to cis-Golgi targeting","type":"exact"},{"name":"rough endoplasmic reticulum to cis-Golgi targeting","type":"exact"},{"name":"vesicle targeting, rough endoplasmic reticulum to cis-Golgi","type":"exact"}],"termid":"GO:0048207"}


id: GO:0050137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O2 + H+ + NADPH = 2 H2O + NADP+.","definition_xrefs":["EC:1.11.1.2","RHEA:15173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"NADPH peroxidase activity","secondary_identifiers":["KEGG_REACTION:R00113","MetaCyc:NADPH-PEROXIDASE-RXN"],"synonyms":[{"name":"NADP peroxidase activity","type":"related"},{"name":"NADPH:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"TPN peroxidase activity","type":"related"},{"name":"TPNH peroxidase activity","type":"related"},{"name":"nicotinamide adenine dinucleotide phosphate peroxidase activity","type":"related"},{"name":"triphosphopyridine nucleotide peroxidase activity","type":"related"}],"termid":"GO:0050137"}


id: GO:0046493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipid A, the glycolipid group of bacterial lipopolysaccharides, consisting of four to six fatty acyl chains linked to two glucosamine residues. Further modifications of the backbone are common.","definition_xrefs":["ISBN:0198506732","PMID:22216004","PMID:20974832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"lipooligosaccharide metabolic process","termid":"GO:1901269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipid A metabolic process","synonyms":[{"name":"lipid A metabolism","type":"exact"}],"termid":"GO:0046493"}


id: GO:0043310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of eosinophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte degranulation","termid":"GO:0043301"},{"relation_name":"is_a","term_name":"regulation of eosinophil degranulation","termid":"GO:0043309"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"eosinophil degranulation","termid":"GO:0043308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of eosinophil degranulation","synonyms":[{"name":"down regulation of eosinophil degranulation","type":"exact"},{"name":"down-regulation of eosinophil degranulation","type":"exact"},{"name":"downregulation of eosinophil degranulation","type":"exact"},{"name":"inhibition of eosinophil degranulation","type":"narrow"},{"name":"negative regulation of eosinophil granule exocytosis","type":"exact"}],"termid":"GO:0043310"}


id: PBO:0048868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A4","termid":"PBO:0048868"}


id: PR:P40389
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-lysine N-methyltransferase rrg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.11c","synonyms":[{"name":"Spom972h-rrg1","type":"exact"},{"name":"elongation factor methyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rapid response to glucose protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40389"}


id: GO:0001641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor that is activated by trans-1-aminocyclopentane-1,3-dicarboxylic acid (t-ACPD) and inhibits adenylate cyclase activity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase inhibiting G protein-coupled glutamate receptor activity","termid":"GO:0001640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"group II metabotropic glutamate receptor activity","termid":"GO:0001641"}


id: GO:0060155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a platelet dense granule. A platelet dense granule is an electron-dense granule occurring in blood platelets that stores and secretes adenosine nucleotides and serotonin. They contain a highly condensed core consisting of serotonin, histamine, calcium, magnesium, ATP, ADP, pyrophosphate and membrane lysosomal proteins.","definition_xrefs":["PMID:11487378","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet dense granule organization","synonyms":[{"name":"bull's eye body organization and biogenesis","type":"related"},{"name":"platelet dense body organization and biogenesis","type":"related"},{"name":"platelet dense granule organisation","type":"exact"},{"name":"platelet dense granule organization and biogenesis","type":"related"}],"termid":"GO:0060155"}


id: PBO:0004556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere-specific histone H3 CENP-A","termid":"PBO:0004556"}


id: MONDO:0800416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 1","secondary_identifiers":["UMLS:C1968924","MEDGEN:369890"],"synonyms":[{"name":"AUTS1","type":"exact"},{"name":"autism susceptibility 1","type":"exact"},{"name":"autism susceptibility 1, isolated cases","type":"exact"}],"termid":"MONDO:0800416","xrefs":{"Monarch":{"xref_id":"0800416"}}}


id: MONDO:0013960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sinoatrial node dysfunction and deafness is a rare genetic disease characterized by congenital severe to profound deafness with no evidence of vestibular dysfunction, associated with sinoatrial node dysfunction with pronounced bradycardia and increased variability of heart rate at rest and episodic syncopes that may be triggered by enhanced physical activity and stress.","definition_xrefs":["Orphanet:324321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"sinoatrial node dysfunction and deafness","secondary_identifiers":["UMLS:C3554018","GARD:17484","MEDGEN:766932","OMIM:614896"],"synonyms":[{"name":"SANDD","type":"related"},{"name":"sinoatrial node dysfunction and deafness","type":"exact"}],"termid":"MONDO:0013960","xrefs":{"Monarch":{"xref_id":"0013960"}}}


id: PBO:0090673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome preservation factor, Stm1 homolog Oga1","termid":"PBO:0090673"}


id: PBO:0053655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 708","termid":"PBO:0053655"}


id: PBO:0002492
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.183","termid":"PBO:0002492"}


id: MONDO:0001261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an electrocardiographic finding of intermittent failure of atrial electrical impulse conduction to the ventricles, characterized by a relatively constant PR interval prior to the block of an atrial impulse. (CDISC)","definition_xrefs":["NCIT:C62018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"second-degree atrioventricular block","termid":"MONDO:0000467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Mobitz type II atrioventricular block","secondary_identifiers":["MEDGEN:102340","SCTID:28189009","NANDO:2100044","ICD9:426.12","NANDO:2200213","DOID:11312","UMLS:C0155700"],"synonyms":[{"name":"AV block second degree Mobitz type II","type":"exact"},{"name":"AV block second degree Möbitz type II","type":"exact"},{"name":"Mobitz (type) II atrioventricular block","type":"exact"},{"name":"Mobitz II","type":"exact"},{"name":"Mobitz II atrioventricular block","type":"exact"},{"name":"Mobitz type II second degree AV block","type":"exact"},{"name":"Möbitz II","type":"exact"},{"name":"Möbitz type II second degree AV block","type":"exact"},{"name":"second degree atrioventricular block Mobitz type II","type":"exact"},{"name":"second degree atrioventricular block Möbitz type II","type":"exact"},{"name":"type 2 2nd degree AV block","type":"exact"},{"name":"type 2 second degree AV block","type":"exact"},{"name":"type II second degree AV block","type":"exact"},{"name":"type II second degree atrioventricular block","type":"exact"}],"termid":"MONDO:0001261","xrefs":{"Monarch":{"xref_id":"0001261"}}}


id: PBO:0071845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 40","termid":"PBO:0071845"}


id: GO:1905677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adaptive immune effector response.","definition_xrefs":["GOC:TermGenie","ISBN:9781405196833","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response","termid":"GO:0002819"},{"relation_name":"regulates","term_name":"adaptive immune effector response","termid":"GO:0090718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adaptive immune effector response","termid":"GO:1905677"}


id: GO:0051968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of glutamatergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glutamate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"is_a","term_name":"regulation of synaptic transmission, glutamatergic","termid":"GO:0051966"},{"relation_name":"positively_regulates","term_name":"synaptic transmission, glutamatergic","termid":"GO:0035249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic transmission, glutamatergic","synonyms":[{"name":"activation of synaptic transmission, glutamatergic","type":"narrow"},{"name":"stimulation of synaptic transmission, glutamatergic","type":"narrow"},{"name":"up regulation of synaptic transmission, glutamatergic","type":"exact"},{"name":"up-regulation of synaptic transmission, glutamatergic","type":"exact"},{"name":"upregulation of synaptic transmission, glutamatergic","type":"exact"}],"termid":"GO:0051968"}


id: GO:0099174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the physical form of a presynapse.","definition_xrefs":["GOC:ai","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"presynapse organization","termid":"GO:0099172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of presynapse organization","synonyms":[{"name":"regulation of presynapse organisation","type":"exact"},{"name":"regulation of presynapse organization and biogenesis","type":"related"},{"name":"regulation of presynapse structure","type":"exact"}],"termid":"GO:0099174"}


id: MONDO:0000585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Good syndrome (obsolete MONDO:0000585)","termid":"MONDO:0000585","xrefs":{"Monarch":{"xref_id":"0000585"}}}


id: GO:0030976
data:
  {"annotated_genes":["SJAG_03743","SJAG_04842","SJAG_02464","SJAG_00706","SJAG_03985","SJAG_02734"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57643,58678,59079,61911,64741,73617],"is_not":false,"summary":null,"term":"GO:0030976"}]},"cv_name":"molecular_function","definition":"Binding to thiamine pyrophosphate, the diphosphoric ester of thiamine. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"quaternary ammonium group binding","termid":"GO:0050997"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00706":null,"SJAG_02464":null,"SJAG_02734":null,"SJAG_03743":null,"SJAG_03985":null,"SJAG_04842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"thiamine pyrophosphate binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"TPP binding","type":"exact"},{"name":"aneurine pyrophosphate binding","type":"exact"},{"name":"cocarboxylase binding","type":"exact"},{"name":"diphosphothiamin binding","type":"exact"},{"name":"thiamin pyrophosphate binding","type":"exact"}],"termid":"GO:0030976","terms_by_termid":{"GO:0030976":null}}


id: GO:0072234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a metanephric nephron tubule over time, from its initial formation to the mature structure. A metanephric nephron tubule is an epithelial tube that is part of the metanephric nephron, the functional part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"is_a","term_name":"metanephric tubule development","termid":"GO:0072170"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric nephron tubule development","termid":"GO:0072234"}


id: GO:0003023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an increase in diameter of an artery is detected and converted to a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"baroreceptor detection of arterial stretch","termid":"GO:0001981"},{"relation_name":"part_of","term_name":"baroreceptor response to increased systemic arterial blood pressure","termid":"GO:0001983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"baroreceptor detection of increased arterial stretch","termid":"GO:0003023"}


id: GO:1903070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.","definition_xrefs":["GOC:rph","GO_REF:0000058","GOC:TermGenie","PMID:17872946"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ER-associated ubiquitin-dependent protein catabolic process (obsolete GO:1903070)","termid":"GO:1903070"}


id: GO:0070536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein deubiquitination process in which a K63-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is removed from a protein.","definition_xrefs":["GOC:mah","PMID:19202061","PMID:19214193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein K63-linked deubiquitination","termid":"GO:0070536"}


id: PR:Q9UTK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L11, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01339","PANTHER:PTHR11661:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L19, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.07c","secondary_identifiers":["UniProtKB:Q9UTK2"],"synonyms":[{"name":"Spom972h-MRPL11","type":"exact"}],"termid":"PR:Q9UTK2"}


id: MONDO:0016065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate- short stature- vertebral anomalies is a multiple congenital anomalies syndrome described in a father and son characterized by the association of cleft palate, peculiar facies (asymmetrical appearance, inner epicanthal folds, short nose, anteverted nostrils, low and back-oriented ears, thin upper lip and micrognathism), short stature, short neck, vertebral anomalies and intellectual disability. The transmission is presumed to be autosomal dominant. There have been no further descriptions in the literature since 1993.","definition_xrefs":["Orphanet:2015"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate-short stature-vertebral anomalies syndrome","secondary_identifiers":["UMLS:C4304704","SCTID:719466009","MEDGEN:930373","GARD:1392"],"synonyms":[{"name":"Mathieu-De Broca-Bony syndrome","type":"exact"},{"name":"cleft palate short stature vertebral anomalies","type":"related"}],"termid":"MONDO:0016065","xrefs":{"Monarch":{"xref_id":"0016065"}}}


id: PBO:0004869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator Bag101 (predicted)","termid":"PBO:0004869"}


id: GO:0002352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process leading to negative selection in B cells. Mechanisms of negative selection include anergy and deletion.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell selection","termid":"GO:0002339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell negative selection","synonyms":[{"name":"B lymphocyte negative selection","type":"exact"},{"name":"B-cell negative selection","type":"exact"},{"name":"B-lymphocyte negative selection","type":"exact"}],"termid":"GO:0002352"}


id: FYPO:0000589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of ascospore formation is increased, i.e. sporulation takes place more rapidly than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000121"],"is_obsolete":false,"name":"increased rate of sporulation","synonyms":[{"name":"increased rate of ascospore formation","type":"exact"},{"name":"sporulation: increased rate","type":"related"}],"termid":"FYPO:0000589"}


id: MONDO:0015943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Eosinophilic granulomatosis with polyangiitis (EGPA), previously known as Churg-Strauss syndrome, is a systemic vasculitis of small-to medium vessels, characterized by asthma, transient pulmonary infiltrates, and hypereosinophilia.","definition_xrefs":["Orphanet:183"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic inflammatory disease associated with an acquired peripheral neuropathy (obsolete MONDO:0016177)","termid":"MONDO:0016177"},{"relation_name":"excluded_subClassOf","term_name":"obsolete non-familial rare disease with dilated cardiomyopathy (obsolete MONDO:0017952)","termid":"MONDO:0017952"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"granulomatosis with polyangiitis","termid":"MONDO:0012105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005240"],"is_obsolete":false,"name":"eosinophilic granulomatosis with polyangiitis","secondary_identifiers":["NCIT:C34481","NORD:973","SCTID:82275008","UMLS:C0008728","MESH:D015267","MedDRA:10048594","DOID:3049","NANDO:2200427","GARD:6111","EFO:0007208","NANDO:1200264","MEDGEN:3088","icd11.foundation:835880885"],"synonyms":[{"name":"CSS","type":"exact"},{"name":"Churg Strauss Syndrome","type":"exact"},{"name":"Churg Strauss syndrome","type":"exact"},{"name":"Churg-Strauss syndrome","type":"exact"},{"name":"Churg-Strauss vasculitis","type":"exact"},{"name":"EGPA","type":"exact"},{"name":"allergic angiitides","type":"exact"},{"name":"allergic angiitides, granulomatous","type":"exact"},{"name":"allergic angiitis","type":"exact"},{"name":"allergic angiitis and granulomatosis","type":"exact"},{"name":"allergic angiitis, granulomatous","type":"exact"},{"name":"allergic granulomatoses","type":"exact"},{"name":"allergic granulomatosis","type":"exact"},{"name":"allergic granulomatosis angiitis","type":"exact"},{"name":"allergic granulomatous Angiitides","type":"exact"},{"name":"allergic granulomatous and angiitis","type":"exact"},{"name":"allergic granulomatous angiitis","type":"exact"},{"name":"angiitides, allergic","type":"exact"},{"name":"angiitides, allergic granulomatous","type":"exact"},{"name":"angiitides, granulomatous allergic","type":"exact"},{"name":"angiitis, allergic","type":"exact"},{"name":"angiitis, allergic granulomatous","type":"exact"},{"name":"angiitis, granulomatous allergic","type":"exact"},{"name":"eosinophilic granulomatous Vasculitides","type":"exact"},{"name":"eosinophilic granulomatous vasculitis","type":"exact"},{"name":"granulomatoses, allergic","type":"exact"},{"name":"granulomatosis, allergic","type":"exact"},{"name":"granulomatous allergic Angiitides","type":"exact"},{"name":"granulomatous allergic angiitis","type":"exact"},{"name":"granulomatous angiitides, allergic","type":"exact"},{"name":"granulomatous angiitis, allergic","type":"exact"},{"name":"granulomatous vasculitides, eosinophilic","type":"exact"},{"name":"granulomatous vasculitis, eosinophilic","type":"exact"},{"name":"syndrome, Churg-Strauss","type":"exact"},{"name":"vasculitides, eosinophilic granulomatous","type":"exact"},{"name":"vasculitis, Churg Strauss","type":"exact"},{"name":"vasculitis, Churg-Strauss","type":"exact"},{"name":"vasculitis, eosinophilic granulomatous","type":"exact"}],"termid":"MONDO:0015943","xrefs":{"Monarch":{"xref_id":"0015943"}}}


id: GO:0008616
data:
  {"annotated_genes":["SJAG_02179","SJAG_06284","SJAG_01781","SJAG_00683"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98918,96126,98917,90004],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0002099"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of queuosines, a series of nucleosides found in position 34 of tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents.","definition_xrefs":["ISBN:0198506732","GOC:go_curators","PMID:28208705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00683":null,"SJAG_01781":null,"SJAG_02179":null,"SJAG_06284":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tRNA queuosine(34) biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"queuosine anabolism","type":"exact"},{"name":"queuosine biosynthesis","type":"exact"},{"name":"queuosine biosynthetic process","type":"exact"},{"name":"queuosine formation","type":"exact"},{"name":"queuosine synthesis","type":"exact"}],"termid":"GO:0008616","terms_by_termid":{"GO:0002099":null}}


id: SO:0000938
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","synonyms":[{"name":"vertebrate immunoglobulin T cell receptor rearranged gene cluster","type":"exact"}],"termid":"SO:0000938"}


id: FYPO:0004672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and contains a nucleus that is broken into small fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"fragmented nucleus during vegetative growth","termid":"FYPO:0001919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0002403"],"is_obsolete":false,"name":"inviable elongated vegetative cell with fragmented nucleus","synonyms":[{"name":"elongated inviable cell with fragmented nucleus","type":"exact"},{"name":"inviable elongated cell with fragmented nucleus during vegetative growth","type":"exact"},{"name":"inviable elongated vegetative cell with fragmented DNA","type":"related"},{"name":"inviable elongated vegetative cell with fragmented nucleus during mitotic cell cycle","type":"related"},{"name":"lethal; elongated vegetative cell with fragmented nucleus","type":"exact"}],"termid":"FYPO:0004672"}


id: FYPO:0006953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-asparagine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular asparagine level","synonyms":[{"name":"increased asparagine accumulation","type":"related"},{"name":"increased cellular L-asparagine level","type":"exact"},{"name":"increased cellular asparagine level during mitotic cell cycle","type":"related"},{"name":"increased cellular asparagine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006953"}


id: GO:0042062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in an increase in the efficacy of transmission at a neuromuscular synapse.","definition_xrefs":["GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"part_of","term_name":"regulation of synaptic assembly at neuromuscular junction","termid":"GO:0008582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"long-term strengthening of neuromuscular junction","termid":"GO:0042062"}


id: MONDO:0859181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEGCAGS syndrome","secondary_identifiers":["OMIM:619488","MEDGEN:1794177","UMLS:C5561967"],"termid":"MONDO:0859181","xrefs":{"Monarch":{"xref_id":"0859181"}}}


id: MONDO:0009971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infant acute respiratory distress syndrome is a lung disorder that affects premature infants caused by developmental insufficiency of surfactant production and structural immaturity of the lungs. The symptoms usually appear shortly after birth and may include tachypnea, tachycardia, chest wall retractions (recession), expiratory grunting, nasal flaring and cyanosis during breathing efforts.","definition_xrefs":["Orphanet:70587"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute respiratory failure","termid":"MONDO:0001208"},{"relation_name":"is_a","term_name":"newborn respiratory distress syndrome","termid":"MONDO:0700081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory distress syndrome in premature infants","secondary_identifiers":["icd11.foundation:343716587","GARD:112","MEDGEN:368840","UMLS:C1968593","MESH:C566881","OMIM:267450"],"synonyms":[{"name":"IRDS","type":"related"},{"name":"NRDS","type":"related"},{"name":"RDS","type":"broad"},{"name":"RDS - infants","type":"related"},{"name":"RDS of prematurity","type":"exact"},{"name":"Respiratory Distress Syndrome, Infant","type":"exact"},{"name":"hyaline Membrane disease","type":"related"},{"name":"hyaline Membrane disease, formerly","type":"related"},{"name":"infantile respiratory distress syndrome","type":"related"},{"name":"respiratory distress syndrome","type":"broad"},{"name":"respiratory distress syndrome in premature infants","type":"exact"},{"name":"respiratory distress syndrome, infant","type":"related"}],"termid":"MONDO:0009971","xrefs":{"Monarch":{"xref_id":"0009971"}}}


id: GO:0090042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an acetyl group from tubulin. An acetyl group is CH3CO-, derived from acetic [ethanoic] acid.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacetylation","termid":"GO:0006476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tubulin deacetylation","termid":"GO:0090042"}


id: PBO:0067977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 279","termid":"PBO:0067977"}


id: PBO:0078650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 3-1","termid":"PBO:0078650"}


id: PBO:0059241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L12","termid":"PBO:0059241"}


id: GO:0046852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone remodeling.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tissue remodeling","termid":"GO:0034105"},{"relation_name":"is_a","term_name":"regulation of bone remodeling","termid":"GO:0046850"},{"relation_name":"positively_regulates","term_name":"bone remodeling","termid":"GO:0046849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone remodeling","synonyms":[{"name":"activation of bone remodeling","type":"narrow"},{"name":"positive regulation of bone remodelling","type":"exact"},{"name":"stimulation of bone remodeling","type":"narrow"},{"name":"up regulation of bone remodeling","type":"exact"},{"name":"up-regulation of bone remodeling","type":"exact"},{"name":"upregulation of bone remodeling","type":"exact"}],"termid":"GO:0046852"}


id: FYPO:0001116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydrogen peroxide is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to oxidative stress","termid":"FYPO:0001280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to hydrogen peroxide","synonyms":[{"name":"decreased RNA accumulation during cellular response to hydrogen peroxide","type":"related"},{"name":"decreased RNA level during cellular response to H2O2","type":"exact"},{"name":"decreased RNA level during cellular response to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to hydrogen peroxide","type":"narrow"},{"name":"decreased transcript level during cellular response to hydrogen peroxide","type":"exact"},{"name":"reduced RNA level during cellular response to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001116"}


id: PBO:0079307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 3B","termid":"PBO:0079307"}


id: PBO:0089878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-P subunit","termid":"PBO:0089878"}


id: PBO:0063017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 5","termid":"PBO:0063017"}


id: PBO:0030262
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_trichodermin","termid":"PBO:0030262"}


id: PATO:0000619
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being overfilled.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crowded","termid":"PATO:0000619"}


id: PBO:0028003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_elongated_cell_with_abnormal_nuclear_morphology","termid":"PBO:0028003"}


id: MONDO:0018839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of schizencephaly that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizencephaly","termid":"MONDO:0010011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"acquired schizencephaly","secondary_identifiers":["GARD:17879","Orphanet:485275","MEDGEN:1825983","UMLS:C5681246"],"synonyms":[{"name":"acquired schizencephaly","type":"exact"}],"termid":"MONDO:0018839","xrefs":{"Monarch":{"xref_id":"0018839"}}}


id: PBO:0081892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 843","termid":"PBO:0081892"}


id: FYPO:0007341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0005311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K4 trimethylation during vegetative growth","synonyms":[{"name":"normal histone H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K4 trimethylation during mitotic cell cycle","type":"related"},{"name":"normal histone H3K4me3 during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K4 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007341"}


id: PBO:0038744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 3","termid":"PBO:0038744"}


id: PBO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap130 (predicted)","termid":"PBO:0002329"}


id: GO:0043162
data:
  {"annotated_genes":["SJAG_03756","SJAG_04489","SJAG_02912","SJAG_01586","SJAG_02584","SJAG_00821","SJAG_04349","SJAG_01981","SJAG_04151","SJAG_04024","SJAG_03892","SJAG_01528","SJAG_04936","SJAG_05303","SJAG_02117","SJAG_01281","SJAG_00416","SJAG_00900","SJAG_03250","SJAG_03783","SJAG_01242","SJAG_04912"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96873,103490,113202],"is_not":false,"summary":null,"term":"GO:0043162"},{"annotations":[78041,106927,88276,109744,91968,71377,98289,91833,78557,73692,115095,72547,96296,72688,88446,73713,78792,101228,71309],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein or peptide covalently tagged with ubiquitin, via the multivesicular body (MVB) sorting pathway; ubiquitin-tagged proteins are sorted into MVBs, and delivered to a lysosome/vacuole for degradation.","definition_xrefs":["GOC:jl","PMID:11511343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-dependent protein catabolic process","termid":"GO:0006511"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01528":null,"SJAG_01586":null,"SJAG_01981":null,"SJAG_02117":null,"SJAG_02584":null,"SJAG_02912":null,"SJAG_03250":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04024":null,"SJAG_04151":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05303":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ubiquitin-dependent protein breakdown via the multivesicular body pathway","type":"exact"},{"name":"ubiquitin-dependent protein catabolic process via the MVB pathway","type":"exact"},{"name":"ubiquitin-dependent protein catabolism via the MVB pathway","type":"exact"},{"name":"ubiquitin-dependent protein degradation via the multivesicular body pathway","type":"exact"}],"termid":"GO:0043162","terms_by_termid":{"GO:0043162":null,"GO:0043328":null}}


id: PBO:0081827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 750","termid":"PBO:0081827"}


id: PR:O74801
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2D10.08c gene.","definition_xrefs":["UniProtKB:O74801","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein yml6, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.08c","synonyms":[{"name":"Spom972h-SPBC2D10.08c","type":"exact"}],"termid":"PR:O74801"}


id: FYPO:0003901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a triphosphatase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal triphosphatase activity","termid":"FYPO:0003901"}


id: PR:Q9P3U4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3U4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase dbl4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.02","synonyms":[{"name":"DNA-break-localizing protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dbl4","type":"exact"},{"name":"histone E3 ligase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3U4"}


id: MONDO:0011532
data:
  {"annotated_genes":["SJAG_00564"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87390],"is_not":false,"summary":null,"term":"MONDO:0011532"}]},"cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the HSPD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00564":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:344289","MESH:C537485","Orphanet:100994","UMLS:C1854467","OMIM:605280","GARD:9616","DOID:0110766"],"synonyms":[{"name":"HSPD1 hereditary spastic paraplegia","type":"exact"},{"name":"SPG13","type":"exact"},{"name":"autosomal dominant spastic paraplegia 13","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 13","type":"related"},{"name":"hereditary spastic paraplegia caused by mutation in HSPD1","type":"exact"},{"name":"hereditary spastic paraplegia type 13","type":"exact"},{"name":"spastic paraplegia 13","type":"related"},{"name":"spastic paraplegia 13, autosomal dominant","type":"related"}],"termid":"MONDO:0011532","terms_by_termid":{"MONDO:0011532":null},"xrefs":{"Monarch":{"xref_id":"0011532"}}}


id: FYPO:0005438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA/DNA annealing activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000653","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abnormal DNA/DNA annealing activity","termid":"FYPO:0005438"}


id: GO:0070133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the process preceding formation of the peptide bond between the first two amino acids of a protein in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational initiation","termid":"GO:0045947"},{"relation_name":"is_a","term_name":"regulation of mitochondrial translational initiation","termid":"GO:0070132"},{"relation_name":"negatively_regulates","term_name":"mitochondrial translational initiation","termid":"GO:0070124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140053"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0140053"],"is_obsolete":false,"name":"negative regulation of mitochondrial translational initiation","synonyms":[{"name":"negative regulation of mitochondrial translation initiation","type":"exact"}],"termid":"GO:0070133"}


id: PBO:0071103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 105","termid":"PBO:0071103"}


id: PBO:0003129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh4 (predicted)","termid":"PBO:0003129"}


id: MONDO:0002475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the lacrimal gland","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal gland carcinoma","termid":"MONDO:0002463"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"lacrimal gland adenocarcinoma","secondary_identifiers":["DOID:298","NCIT:C4541","MEDGEN:87556","UMLS:C0346341","SCTID:254988008"],"synonyms":[{"name":"adenocarcinoma of lacrimal gland","type":"exact"},{"name":"adenocarcinoma of the lacrimal gland","type":"exact"},{"name":"lacrimal gland adenocarcinoma","type":"exact"}],"termid":"MONDO:0002475","xrefs":{"Monarch":{"xref_id":"0002475"}}}


id: GO:0071454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating a decline in oxygen levels to trace amounts, <0.1%.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"response to anoxia","termid":"GO:0034059"},{"relation_name":"is_a","term_name":"cellular response to decreased oxygen levels","termid":"GO:0036294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to anoxia","synonyms":[{"name":"cellular response to anaerobic conditions","type":"exact"},{"name":"cellular response to anoxic stress","type":"exact"}],"termid":"GO:0071454"}


id: GO:0044790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism stops, prevents or reduces the frequency, rate or extent of the release of a virus with which it is infected, from its cells.","definition_xrefs":["PMID:18305167","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to virus","termid":"GO:0051607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression of viral release by host","secondary_identifiers":["GO:1902187"],"synonyms":[{"name":"down regulation of release of virus from host","type":"exact"},{"name":"down regulation of viral exit","type":"exact"},{"name":"down regulation of viral release","type":"exact"},{"name":"down regulation of viral release from host cell","type":"exact"},{"name":"down regulation of viral shedding","type":"exact"},{"name":"down-regulation of release of virus from host","type":"exact"},{"name":"down-regulation of viral exit","type":"exact"},{"name":"down-regulation of viral release","type":"exact"},{"name":"down-regulation of viral release from host cell","type":"exact"},{"name":"down-regulation of viral shedding","type":"exact"},{"name":"downregulation of release of virus from host","type":"exact"},{"name":"downregulation of viral exit","type":"exact"},{"name":"downregulation of viral release","type":"exact"},{"name":"downregulation of viral release from host cell","type":"exact"},{"name":"downregulation of viral shedding","type":"exact"},{"name":"inhibition of release of virus from host","type":"exact"},{"name":"inhibition of viral exit","type":"exact"},{"name":"inhibition of viral release","type":"exact"},{"name":"inhibition of viral release from host cell","type":"narrow"},{"name":"inhibition of viral shedding","type":"exact"},{"name":"negative regulation by host of viral release from host cell","type":"exact"},{"name":"negative regulation of release of virus from host","type":"exact"},{"name":"negative regulation of viral exit","type":"exact"},{"name":"negative regulation of viral release","type":"exact"},{"name":"negative regulation of viral release from host cell","type":"exact"},{"name":"negative regulation of viral shedding","type":"exact"}],"termid":"GO:0044790"}


id: GO:0090692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The site on the mitochondrial membrane where the separation of a single continuous mitochondrial membrane into two membranes occurs as a final step in mitochondrial fission.","definition_xrefs":["GOC:bc","GOC:PARL","PMID:26618722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrial membrane","termid":"GO:0031966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"mitochondrial membrane scission site","termid":"GO:0090692"}


id: PBO:0069339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 599, pseudogene","termid":"PBO:0069339"}


id: MONDO:0012122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Moyamoya disease","termid":"MONDO:0016820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"moyamoya disease 3","secondary_identifiers":["MESH:C536993","MEDGEN:373326","OMIM:608796","UMLS:C1837418","GARD:15442"],"synonyms":[{"name":"MYMY3","type":"exact"},{"name":"Moyamoya disease 3","type":"related"}],"termid":"MONDO:0012122","xrefs":{"Monarch":{"xref_id":"0012122"}}}


id: PBO:0041682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer antigen 1","termid":"PBO:0041682"}


id: PBO:0091795
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae VPS9","termid":"PBO:0091795"}


id: GO:1990040
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Specialization of the hypolemmal cisterna consisting of either single profiles or closely apposed stacks of endoplasmic reticulum in which the lumen is obliterated, lying 10-20 nm beneath the plasma membrane.","definition_xrefs":["ISBN:0195065719","NIF_Subcellular:sao128470897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypolemmal cisterna","termid":"GO:1990039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"sub-surface cisterna","synonyms":[{"name":"sub-surface cisternae","type":"exact"}],"termid":"GO:1990040"}


id: MONDO:0006293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant mixed neoplasm (obsolete MONDO:0006293)","termid":"MONDO:0006293","xrefs":{"Monarch":{"xref_id":"0006293"}}}


id: PATO:0000996
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000996 absolute viscosity value (obsolete PATO:0000996)","termid":"PATO:0000996"}


id: PBO:0049782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 17","termid":"PBO:0049782"}


id: PATO:0000469
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000469 high (obsolete PATO:0000469)","termid":"PATO:0000469"}


id: PBO:0027673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_ascospore_release_from_ascus","termid":"PBO:0027673"}


id: MONDO:0006584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Jaundice that appears during the neonatal period. In the majority of cases, it appears in the first week of life and is classified as physiologic due to accelerated destruction of erythrocytes and liver immaturity. In a minority of cases it is classified as non-physiologic, appearing in the first twenty four hours after birth, and is associated with underlying diseases including hemolytic disorders, polycythemia, and cephalohematoma.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete neonatal jaundice (obsolete MONDO:0006584)","secondary_identifiers":["ICD9:774.6","SCTID:387712008","MESH:D007567","DOID:2383","ICD9:774.5"],"synonyms":[{"name":"neonatal hyperbilirubinemia","type":"exact"},{"name":"neonatal icterus","type":"exact"}],"termid":"MONDO:0006584","xrefs":{"Monarch":{"xref_id":"0006584"}}}


id: GO:0099560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of presynaptic membrane to postsynaptic membrane via adhesion molecules that are at least partially embedded in the plasma membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"synaptic membrane adhesion","synonyms":[{"name":"synapse adhesion between pre- and post-synapse","type":"exact"}],"termid":"GO:0099560"}


id: MOD:00102
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to L-methionine amide.","definition_xrefs":["PubMed:4375977","RESID:AA0093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine amide","synonyms":[{"name":"(2S)-2-amino-4-(methylsulfanyl)butanamide","type":"exact"},{"name":"2-amino-4-(methylthio)butanamide","type":"exact"},{"name":"L-methionine amide","type":"exact"},{"name":"MOD_RES Methionine amide","type":"exact"},{"name":"MetN","type":"exact"},{"name":"amidated L-methionine","type":"exact"},{"name":"methioninamide","type":"exact"}],"termid":"MOD:00102"}


id: GO:0009765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"part_of","term_name":"photosynthesis, light reaction","termid":"GO:0019684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthesis, light harvesting","synonyms":[{"name":"energy dissipation","type":"related"}],"termid":"GO:0009765"}


id: PBO:0076456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin 2 pseudogene 2","termid":"PBO:0076456"}


id: MONDO:0011927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tufted angioma is a very rare, benign, cutaneous, slow-growing, vascular tumor mostly developing in infancy or early childhood.","definition_xrefs":["Orphanet:1063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin hemangioma","termid":"MONDO:0003110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tufted angioma","secondary_identifiers":["MESH:C536924","MEDGEN:83402","GARD:425","icd11.foundation:1994573217","HP:0012329","ICDO:9161/0","NCIT:C4487","OMIM:607859","ICD9:215.9","SCTID:705155008","UMLS:C0346073"],"synonyms":[{"name":"Nakagawa angioblastoma","type":"exact"},{"name":"angioblastoma of Nakagawa","type":"exact"},{"name":"angioma tufted","type":"related"},{"name":"angioma, tufted","type":"related"},{"name":"tufted angioma","type":"exact"},{"name":"tufted angioma (disease)","type":"exact"},{"name":"tufted angioma of skin","type":"exact"},{"name":"tufted angioma of the skin","type":"exact"},{"name":"tufted hemangioma","type":"exact"},{"name":"tufted hemangioma of skin","type":"exact"},{"name":"tufted hemangioma of the skin","type":"exact"},{"name":"tufted skin angioma","type":"exact"}],"termid":"MONDO:0011927","xrefs":{"Monarch":{"xref_id":"0011927"}}}


id: PBO:0060951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFIL3 like basic leucine zipper","termid":"PBO:0060951"}


id: PBO:0029481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_sterol_ester_level","termid":"PBO:0029481"}


id: PBO:0011084
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate Km, Mg2+ Km 3.0 mM","termid":"PBO:0011084"}


id: GO:0035647
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a 3-oxo-delta-4,5-steroid + NADPH + H+ = a 5-beta-3-oxo-steroid + NADP+.","definition_xrefs":["PMID:19166903","MetaCyc:RXN-9726","GOC:kad"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-delta(4,5)-steroid 5-beta-reductase activity (obsolete GO:0035647)","synonyms":[{"name":"3-oxo-delta4,5-steroid 5beta-reductase","type":"exact"}],"termid":"GO:0035647"}


id: GO:0008070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polarization of the ovarian follicle cells along the dorsal-ventral axis by a gene product encoded by cells of the germ line.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral axis specification, ovarian follicular epithelium","termid":"GO:0008069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maternal determination of dorsal/ventral axis, ovarian follicular epithelium, germ-line encoded","synonyms":[{"name":"maternal determination of dorsal-ventral axis, ovarian follicular epithelium, germ-line encoded","type":"exact"},{"name":"maternal determination of dorsoventral axis, ovarian follicular epithelium, germ-line encoded","type":"exact"}],"termid":"GO:0008070"}


id: PBO:0058976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid leukemia factor 2","termid":"PBO:0058976"}


id: PBO:0017635
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lesch-Nyhan Syndrome","termid":"PBO:0017635"}


id: PR:O14166
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4C5.03 gene.","definition_xrefs":["UniProtKB:O14166","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4C5.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4C5.03","synonyms":[{"name":"Spom972h-SPAC4C5.03","type":"exact"}],"termid":"PR:O14166"}


id: GO:0090047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription regulator activity, any molecular function that plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.","definition_xrefs":["GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription regulator activity (obsolete GO:0090047)","synonyms":[{"name":"positive regulation of transcription regulator activity","type":"exact"}],"termid":"GO:0090047"}


id: PBO:0117162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKAL1 threonylcarbamoyladenosine tRNA methylthiotransferase","termid":"PBO:0117162"}


id: PBO:0079708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin 2","termid":"PBO:0079708"}


id: MONDO:0030044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudo-TORCH syndrome","termid":"MONDO:0009626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"pseudo-TORCH syndrome 3","secondary_identifiers":["OMIM:618886","MEDGEN:1708513","UMLS:C5394391"],"synonyms":[{"name":"PSEUDO-TORCH SYNDROME 3","type":"exact"},{"name":"PTORCH3","type":"exact"},{"name":"pseudo-torch syndrome 3","type":"exact"}],"termid":"MONDO:0030044","xrefs":{"Monarch":{"xref_id":"0030044"}}}


id: GO:1990963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the barrier between the blood and the retina. The blood-retinal barrier is located at two levels, forming an outer barrier in the retinal pigment epithelium and an inner barrier in the endothelial membrane of the retinal vessels. Both these membranes have tight junctions of the 'nonleaky' type.","definition_xrefs":["PMID:25053619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-retinal barrier","synonyms":[{"name":"establishment of BRB","type":"related"},{"name":"establishment of blood-retina barrier","type":"exact"}],"termid":"GO:1990963"}


id: MONDO:0013140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial chronic mucocutaneous candidiasis in which the cause of the disease is a mutation in the CLEC7A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"candidiasis, familial, 4","secondary_identifiers":["SCTID:235073000","UMLS:C0341024","OMIM:613108","GARD:15617","MEDGEN:90958"],"synonyms":[{"name":"CANDF4","type":"related"},{"name":"CLEC7A familial chronic mucocutaneous candidiasis","type":"exact"},{"name":"candidiasis, familial chronic mucocutaneous","type":"related"},{"name":"candidiasis, familial, 4","type":"exact"},{"name":"candidiasis, familial, 4, autosomal recessive","type":"exact"},{"name":"candidiasis, familial, type 4","type":"exact"},{"name":"familial chronic mucocutaneous candidiasis caused by mutation in CLEC7A","type":"exact"}],"termid":"MONDO:0013140","xrefs":{"Monarch":{"xref_id":"0013140"}}}


id: GO:0007283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which male germ line stem cells self renew or give rise to successive cell types resulting in the development of a spermatozoa.","definition_xrefs":["ISBN:9780878933846","PMID:30990821","PMID:28073824","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"male gamete generation","termid":"GO:0048232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatogenesis","secondary_identifiers":["Wikipedia:Spermatogenesis"],"synonyms":[{"name":"generation of spermatozoa","type":"exact"}],"termid":"GO:0007283"}


id: GO:0042555
data:
  {"annotated_genes":["SJAG_00884","SJAG_02348","SJAG_04210","SJAG_00857","SJAG_01354","SJAG_01762"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70332,71404,73632,73818,74974,77738],"is_not":false,"summary":null,"term":"GO:0042555"}]},"cv_name":"cellular_component","definition":"A hexameric protein complex required for the initiation and regulation of DNA replication.","definition_xrefs":["GOC:jl","PMID:11282021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_01354":null,"SJAG_01762":null,"SJAG_02348":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MCM complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"mini-chromosome maintenance complex","type":"exact"}],"termid":"GO:0042555","terms_by_termid":{"GO:0042555":null}}


id: GO:0103104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-methylthiohexyldesulfoglucosinolate + 3'-phosphonato-5'-adenylyl sulfate = adenosine 3',5'-bismonophosphate + H+ + 6-methylthiohexylglucosinolate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-methylthiohexyldesulfoglucosinolate sulfotransferase activity (obsolete GO:0103104)","termid":"GO:0103104"}


id: GO:0097081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to a vascular smooth muscle cell fate and their capacity to differentiate into vascular smooth muscle cells. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell fate commitment","termid":"GO:0042693"},{"relation_name":"part_of","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell fate commitment","synonyms":[{"name":"vascular smooth muscle cell fate commitment","type":"exact"}],"termid":"GO:0097081"}


id: PBO:0073509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 3C","termid":"PBO:0073509"}


id: PBO:0085171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oligomeric mitochondrial matrix chaperone; cooperates with Ssc1p in mitochondrial thermotolerance after heat shock; able to prevent the aggregation of misfolded proteins as well as resolubilize protein aggregates","termid":"PBO:0085171"}


id: FYPO:0002607
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal at tRNA genes (tDNA) in centromeric regions during S phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at centromeric tDNA during mitotic S phase","synonyms":[{"name":"increased histone H2A phosphorylation at centromeric tDNA during mitotic S phase during vegetative growth","type":"exact"}],"termid":"FYPO:0002607"}


id: PBO:0031632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_spore_germination","termid":"PBO:0031632"}


id: GO:0043801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribulose 5-phosphate + formaldehyde = D-arabino-3-hexulose 6-phosphate.","definition_xrefs":["PMID:16075199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hexulose-6-phosphate synthase activity","secondary_identifiers":["EC:4.1.2.43","RHEA:25201","MetaCyc:R10-RXN"],"termid":"GO:0043801"}


id: PBO:0089808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase","termid":"PBO:0089808"}


id: PBO:0052638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 6","termid":"PBO:0052638"}


id: GO:0042568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of two proteins, which in animals is 50kDa and consists of the insulin-like growth factor (IGF) and one of the insulin-like growth factor binding protein-1 (IGFBP-1), -2 (IGFBP-2), -4 (IGFBP-4) and -6 (IGFBP-6). The complex plays a role in growth and development.","definition_xrefs":["GOC:jl","PMID:12239079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulin-like growth factor binding protein complex","termid":"GO:0016942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"insulin-like growth factor binary complex","synonyms":[{"name":"IGF binary complex","type":"exact"}],"termid":"GO:0042568"}


id: PBO:0048730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate dehydrogenase 1","termid":"PBO:0048730"}


id: PBO:0054231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1613","termid":"PBO:0054231"}


id: PBO:0053405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 336","termid":"PBO:0053405"}


id: MONDO:0006579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, darkly pigmented skin lesion characterized by proliferation of keratinocytes and melanocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"seborrheic keratosis","termid":"MONDO:0008420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"melanoacanthoma","secondary_identifiers":["EFO:1000733","DOID:11684","SCTID:394727000","Wikipedia:Melanocanthoma","NCIT:C27548","MEDGEN:272110","UMLS:C1321683"],"termid":"MONDO:0006579","xrefs":{"Monarch":{"xref_id":"0006579"}}}


id: PBO:0063423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4B antisense RNA 1","termid":"PBO:0063423"}


id: GO:2000049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell-cell adhesion mediated by cadherin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion mediated by cadherin","termid":"GO:2000047"},{"relation_name":"positively_regulates","term_name":"cell-cell adhesion mediated by cadherin","termid":"GO:0044331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell-cell adhesion mediated by cadherin","termid":"GO:2000049"}


id: FYPO:0008083
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the endoplasmic reticulum is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal macroautophagy","termid":"FYPO:0000163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal reticulophagy","termid":"FYPO:0008083"}


id: PBO:0057764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2053","termid":"PBO:0057764"}


id: GO:0070951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of neutrophil mediated killing of a gram-negative bacterium, the directed killing of a gram-negative bacterium by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of bacterium","termid":"GO:0070950"},{"relation_name":"regulates","term_name":"neutrophil-mediated killing of gram-negative bacterium","termid":"GO:0070945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil mediated killing of gram-negative bacterium","termid":"GO:0070951"}


id: FYPO:0003367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize pyridoxine, and therefore requires pyridoxine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for pyridoxine","synonyms":[{"name":"growth auxotrophic for pyridoxine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for pyridoxine during vegetative growth","type":"exact"},{"name":"pyridoxine auxotrophy","type":"exact"}],"termid":"FYPO:0003367"}


id: MONDO:0014414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lymphoproliferative syndrome","termid":"MONDO:0016537"},{"relation_name":"excluded_subClassOf","term_name":"autoimmune thrombocytopenia","termid":"MONDO:0019098"},{"relation_name":"excluded_subClassOf","term_name":"autoimmune hemolytic anemia","termid":"MONDO:0020108"},{"relation_name":"is_a","term_name":"autoimmune disease, multisystem, infantile-onset","termid":"MONDO:0000213"},{"relation_name":"is_a","term_name":"hematopoietic and lymphoid system neoplasm","termid":"MONDO:0002334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"STAT3-related early-onset multisystem autoimmune disease","secondary_identifiers":["GARD:17737","Orphanet:438159","MEDGEN:863232","OMIM:615952","UMLS:C4014795","NCIT:C157123"],"synonyms":[{"name":"ADMIO","type":"related"},{"name":"ADMIO1","type":"related"},{"name":"autoimmune disease, multisystem, infantile-onset","type":"related"},{"name":"autoimmune disease, multisystem, infantile-onset, 1","type":"related"}],"termid":"MONDO:0014414","xrefs":{"Monarch":{"xref_id":"0014414"}}}


id: GO:0003837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoyl-beta-alanine + H2O = beta-alanine + CO2 + NH3.","definition_xrefs":["EC:3.5.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-ureidopropionase activity","secondary_identifiers":["Reactome:R-HSA-73591","MetaCyc:BETA-UREIDOPROPIONASE-RXN","Reactome:R-HSA-73620","RHEA:11184"],"synonyms":[{"name":"N-carbamoyl-beta-alanine amidohydrolase activity","type":"related"}],"termid":"GO:0003837"}


id: GO:0032935
data:
  {"annotated_genes":["SJAG_03715"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115293],"is_not":false,"summary":null,"term":"GO:0032935"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of a sterol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid sensor activity","termid":"GO:0106254"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03715":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140299","GO:0098772"],"is_obsolete":false,"name":"sterol sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sterol sensing activity","type":"exact"},{"name":"sterol-sensing domain","type":"narrow"}],"termid":"GO:0032935","terms_by_termid":{"GO:0032935":null}}


id: PBO:0038531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 5, lysophosphatidic acid acyltransferase","termid":"PBO:0038531"}


id: MONDO:0021458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the penis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign male reproductive system neoplasm","termid":"MONDO:0000625"},{"relation_name":"is_a","term_name":"penile neoplasm","termid":"MONDO:0006895"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of penis","secondary_identifiers":["NCIT:C3489","UMLS:C0149627","icd11.foundation:561160219","MEDGEN:57435","ICD10CM:D29.0","SCTID:92286008","ICD9:222.1"],"synonyms":[{"name":"benign neoplasm of the penis","type":"exact"},{"name":"benign penile neoplasm","type":"exact"},{"name":"benign penile tumor","type":"exact"},{"name":"benign penile tumour","type":"exact"},{"name":"benign tumor of penis","type":"exact"},{"name":"benign tumor of the penis","type":"exact"},{"name":"benign tumour of penis","type":"exact"},{"name":"benign tumour of the penis","type":"exact"},{"name":"penis benign neoplasm","type":"exact"}],"termid":"MONDO:0021458","xrefs":{"Monarch":{"xref_id":"0021458"}}}


id: GO:0045854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process in which bicoid mRNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bicoid mRNA localization","termid":"GO:0008359"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"is_a","term_name":"positive regulation of intracellular mRNA localization","termid":"GO:1904582"},{"relation_name":"positively_regulates","term_name":"bicoid mRNA localization","termid":"GO:0045450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bicoid mRNA localization","synonyms":[{"name":"activation of bicoid mRNA localization","type":"narrow"},{"name":"positive regulation of bicoid mRNA localisation","type":"exact"},{"name":"stimulation of bicoid mRNA localization","type":"narrow"},{"name":"up regulation of bicoid mRNA localization","type":"exact"},{"name":"up-regulation of bicoid mRNA localization","type":"exact"},{"name":"upregulation of bicoid mRNA localization","type":"exact"}],"termid":"GO:0045854"}


id: GO:0099554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of gaseous molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"},{"relation_name":"is_a","term_name":"trans-synaptic signaling, modulating synaptic transmission","termid":"GO:0099550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by soluble gas, modulating synaptic transmission","termid":"GO:0099554"}


id: GO:0047420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acyl-D-amino acid = D-amino acid + an acid.","definition_xrefs":["EC:3.5.1.81","MetaCyc:3.5.1.81-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"N-acyl-D-amino-acid deacylase activity","secondary_identifiers":["RHEA:18309"],"synonyms":[{"name":"D-aminoacylase activity","type":"related"},{"name":"N-acyl-D-amino acid amidohydrolase activity","type":"related"}],"termid":"GO:0047420"}


id: PBO:0052049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KAT8 regulatory NSL complex subunit 1","termid":"PBO:0052049"}


id: PBO:0082075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exonuclease and flap-endonuclease; involved in recombination, double-strand break repair, MMS2 error-free branch of the post replication (PRR) pathway and DNA mismatch repair; role in telomere maintenance; member of the Rad2p nuclease family, with conserved N and I nuclease domains; relative distribution to the nucleus increases upon DNA replication stress; EXO1 has a paralog, DIN7, that arose from the whole genome duplication","termid":"PBO:0082075"}


id: PBO:0084740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermembrane space protein; required for normal oxygen consumption; contains twin cysteine-x9-cysteine motifs; protein abundance increases in response to DNA replication stress","termid":"PBO:0084740"}


id: GO:0009856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cascade of biological processes occurring in plants beginning when the pollen lands on the female reproductive organs of a plant and continuing up to, but not including, fertilization, as defined by sperm-egg cell fusion.","definition_xrefs":["GOC:tb","PMID:10973091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"multi-multicellular organism process","termid":"GO:0044706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollination","secondary_identifiers":["Wikipedia:Pollination"],"termid":"GO:0009856"}


id: GO:0048194
data:
  {"annotated_genes":["SJAG_04391","SJAG_01516","SJAG_03268"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77957],"is_not":false,"summary":null,"term":"GO:0048194"},{"annotations":[71673,118135],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"}]},"cv_name":"biological_process","definition":"The evagination of the Golgi membrane, resulting in formation of a vesicle.","definition_xrefs":["GOC:jid","PMID:10219233","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle budding from membrane","termid":"GO:0006900"},{"relation_name":"part_of","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01516":null,"SJAG_03268":null,"SJAG_04391":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"Golgi vesicle budding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Golgi-derived vesicle budding","type":"exact"},{"name":"dictyosome vesicle budding","type":"narrow"}],"termid":"GO:0048194","terms_by_termid":{"GO:0048194":null,"GO:0048205":null}}


id: MOD:00994
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-bromo-L-tyrosine","termid":"MOD:01025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(79)Br labeled 3'-bromotyrosine","termid":"MOD:00994"}


id: MONDO:0021320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the mouth floor.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"neoplasm of floor of mouth","termid":"MONDO:0021383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"malignant tumor of floor of mouth","secondary_identifiers":["MEDGEN:102264","UMLS:C0153368","ICD9:144.9","SCTID:363385007","ICD9:144.8","NCIT:C9318"],"synonyms":[{"name":"cancer of mouth floor","type":"exact"},{"name":"malignant floor of mouth neoplasm","type":"exact"},{"name":"malignant floor of mouth tumor","type":"exact"},{"name":"malignant floor of mouth tumour","type":"exact"},{"name":"malignant floor of the mouth neoplasm","type":"exact"},{"name":"malignant floor of the mouth tumor","type":"exact"},{"name":"malignant floor of the mouth tumour","type":"exact"},{"name":"malignant mouth floor neoplasm","type":"exact"},{"name":"malignant neoplasm of floor of mouth","type":"exact"},{"name":"malignant neoplasm of mouth floor","type":"exact"},{"name":"malignant neoplasm of the floor of the mouth","type":"exact"},{"name":"malignant tumor of the floor of the mouth","type":"exact"},{"name":"malignant tumour of the floor of the mouth","type":"exact"},{"name":"mouth floor cancer","type":"exact"}],"termid":"MONDO:0021320","xrefs":{"Monarch":{"xref_id":"0021320"}}}


id: GO:1903354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of distal tip cell migration.","definition_xrefs":["GOC:TermGenie","PMID:24968003","GO_REF:0000058","GOC:mm2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"distal tip cell migration","termid":"GO:0097628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of distal tip cell migration","termid":"GO:1903354"}


id: PBO:0057074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 153-2","termid":"PBO:0057074"}


id: GO:0102233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (cis)-crotonaldehyde + NADPH + H+ = butanal + NADP.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete crotonaldehyde redutase activity (obsolete GO:0102233)","termid":"GO:0102233"}


id: PBO:0034358
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-correlated_with","termid":"PBO:0034358"}


id: PBO:0070008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1305, pseudogene","termid":"PBO:0070008"}


id: GO:0098618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-selenomethionine + tRNA(Met) => AMP + diphosphate + selenomethionyl-tRNA(Met).","definition_xrefs":["PMID:16661668","PMID:16661782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"selenomethionine-tRNA ligase activity","secondary_identifiers":["Reactome:R-HSA-2408546"],"termid":"GO:0098618"}


id: PBO:0085107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear SAM-dependent mono- and asymmetric methyltransferase; modifies hnRNPs, including Npl3p and Hrp1p, affecting their activity and nuclear export; methylates U1 snRNP protein Snp1p, ribosomal protein Rps2p, and histones H3 and H4; interacts genetically with genes encoding components of Rpd3(L) and this interaction is important for Rpd3 recruitment to the subtelomeric region","termid":"PBO:0085107"}


id: MONDO:0032616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 10","secondary_identifiers":["MEDGEN:1648426","GARD:16320","DOID:0112075","UMLS:C4748768","OMIM:618233"],"synonyms":[{"name":"MC1DN10","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 10","type":"related"}],"termid":"MONDO:0032616","xrefs":{"Monarch":{"xref_id":"0032616"}}}


id: FYPO:0008211
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of antisense RNA measured in a cell is lower than normal duing heat stress. Antisense RNA is transcribed from the coding, rather than the template, strand of DNA.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased antisense RNA level","termid":"FYPO:0004816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased antisense RNA level during heat stress","termid":"FYPO:0008211"}


id: GO:0140771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hexadecanoyl-[ACP] + L-lysyl-[protein] = H+ + holo-[ACP] + N(6)-hexadecanoyl-L-lysyl-[protein].","definition_xrefs":["PMID:32461253","RHEA:70615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine N6-palmitoyltransferase activity","termid":"GO:0018031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ACP-dependent peptidyl-lysine N6-palmitoyltransferase activity","termid":"GO:0140771"}


id: PBO:0091900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf antidote-like meiotic drive suppressor Wtf5","termid":"PBO:0091900"}


id: GO:0016835
data:
  {"annotated_genes":["SJAG_02972","SJAG_02369","SJAG_00461","SJAG_04404","SJAG_03124","SJAG_00432","SJAG_04098","SJAG_02689","SJAG_02107","SJAG_02084","SJAG_04107","SJAG_01630","SJAG_04843","SJAG_03724","SJAG_00305","SJAG_00337","SJAG_00592","SJAG_06611","SJAG_05007","SJAG_02106","SJAG_01372","SJAG_03669","SJAG_01300","SJAG_02293","SJAG_03588","SJAG_16460","SJAG_04674","SJAG_03243","SJAG_01574","SJAG_03485","SJAG_02988","SJAG_03213","SJAG_05283"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75006,59952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019171"},{"annotations":[60150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003855"},{"annotations":[60151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003856"},{"annotations":[59377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003861"},{"annotations":[96210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051575"},{"annotations":[73514,74125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003994"},{"annotations":[77859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047453"},{"annotations":[77902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004089"},{"annotations":[73001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004107"},{"annotations":[65884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140078"},{"annotations":[71592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004160"},{"annotations":[79636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004333"},{"annotations":[73299,74835,61071,59306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019172"},{"annotations":[64461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004409"},{"annotations":[76188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004424"},{"annotations":[80443,78658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046570"},{"annotations":[110882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051009"},{"annotations":[70748,70195,77346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004634"},{"annotations":[72004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004655"},{"annotations":[78256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004664"},{"annotations":[79994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004730"},{"annotations":[77352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004795"},{"annotations":[80677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061503"},{"annotations":[73649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004834"},{"annotations":[75131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004852"},{"annotations":[61542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102158"}]},"cv_name":"molecular_function","definition":"Catalysis of the breakage of a carbon-oxygen bond.","definition_xrefs":["EC:4.2.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00305":null,"SJAG_00337":null,"SJAG_00432":null,"SJAG_00461":null,"SJAG_00592":null,"SJAG_01300":null,"SJAG_01372":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_02084":null,"SJAG_02106":null,"SJAG_02107":null,"SJAG_02293":null,"SJAG_02369":null,"SJAG_02689":null,"SJAG_02972":null,"SJAG_02988":null,"SJAG_03124":null,"SJAG_03213":null,"SJAG_03243":null,"SJAG_03485":null,"SJAG_03588":null,"SJAG_03669":null,"SJAG_03724":null,"SJAG_04098":null,"SJAG_04107":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04843":null,"SJAG_05007":null,"SJAG_05283":null,"SJAG_06611":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"carbon-oxygen lyase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"other carbon-oxygen lyase activity","type":"narrow"}],"termid":"GO:0016835","terms_by_termid":{"GO:0003855":null,"GO:0003856":null,"GO:0003861":null,"GO:0003994":null,"GO:0004089":null,"GO:0004107":null,"GO:0004160":null,"GO:0004333":null,"GO:0004409":null,"GO:0004424":null,"GO:0004634":null,"GO:0004655":null,"GO:0004664":null,"GO:0004730":null,"GO:0004795":null,"GO:0004834":null,"GO:0004852":null,"GO:0019171":null,"GO:0019172":null,"GO:0046570":null,"GO:0047453":null,"GO:0051009":null,"GO:0051575":null,"GO:0061503":null,"GO:0102158":null,"GO:0140078":null}}


id: PBO:0003180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT domain protein Brc1","termid":"PBO:0003180"}


id: PBO:0081513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 419","termid":"PBO:0081513"}


id: GO:0071923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of a process in which a cohesin complex is transported to, or maintained at, a part of a chromosome that is organized into chromatin.","definition_xrefs":["PMID:17113138","GOC:mah","GOC:lb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cohesin loading (obsolete GO:0071923)","synonyms":[{"name":"negative regulation of cohesin association with chromatin","type":"exact"},{"name":"negative regulation of cohesin localisation to chromatin","type":"exact"},{"name":"negative regulation of cohesin localization to chromatin","type":"related"}],"termid":"GO:0071923"}


id: PBO:0049573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B.W histone 1","termid":"PBO:0049573"}


id: PATO:0002362
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tendency which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"},{"relation_name":"is_a","term_name":"tendency","termid":"PATO:0002360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased tendency","termid":"PATO:0002362"}


id: PBO:0079254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 24","termid":"PBO:0079254"}


id: GO:0099642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins along microtubules from the cell periphery toward the cell body in nerve cell axons.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde axonal transport","termid":"GO:0008090"},{"relation_name":"is_a","term_name":"axo-dendritic protein transport","termid":"GO:0099640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"retrograde axonal protein transport","synonyms":[{"name":"retrograde axon cargo transport","type":"broad"}],"termid":"GO:0099642"}


id: RO:0008501
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship wherein a plant or algae is living on the outside surface of another plant.","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiphyte_of","termid":"RO:0008501"}


id: MONDO:0015241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis-like syndrome, also known as Kuskokwim disease, is a very rare congenital contracture disorder, reported exclusively in Yup'ik Eskimos of the Kuskokwim River delta region of Alaska, characterized by multiple contractures of large joints (predominantly the knees and ankles) that present at birth or during childhood but are lifelong; deformities of the spine, pelvis and feet; and sometimes proximally or distally displaced patellae and muscle atrophy in the limbs with contractures. Additional radiological features include mild vertebral wedging, elongation of the vertebral pedicle, and clubbing of the distal clavicle. An autosomal recessive pattern of inheritance has been suggested.","definition_xrefs":["Orphanet:1149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis-like syndrome","secondary_identifiers":["SCTID:702447002","GARD:3150","MEDGEN:349229","ICD9:719.89","OMIM:208200","UMLS:C1859709"],"synonyms":[{"name":"Kuskokwim disease","type":"exact"},{"name":"Kuskokwim syndrome","type":"related"},{"name":"arthrogryposis like disorder","type":"related"}],"termid":"MONDO:0015241","xrefs":{"Monarch":{"xref_id":"0015241"}}}


id: GO:0031833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 7 serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 7 serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 7 receptor binding","type":"exact"},{"name":"type 7 serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031833"}


id: FYPO:0005642
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome biorientation is abnormal during meiosis, with chromosomes that are not correctly oriented with the kinetochores facing outwards. Homologous chromosome biorientation is the process in which the sister centromeres of one chromosome attach to microtubules that emanate from the same spindle pole, ensuring that homologous maternal and paternal chromosomes are pulled in opposite directions at anaphase of meiosis I.","definition_xrefs":["PomBase:mah","PMID:21920317","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic homologous chromosome biorientation","termid":"FYPO:0003177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal meiotic homologous chromosome biorientation with abnormal kinetochore orientation","synonyms":[{"name":"abnormal homologous chromosome biorientation with abnormal kinetochore orientation during meiosis","type":"exact"},{"name":"abnormal homologous chromosome orientation involved in meiotic metaphase I plate congression with abnormal kinetochore orientation","type":"exact"},{"name":"abnormal meiotic homologous chromosome biorientation with abnormal kinetochore position","type":"exact"}],"termid":"FYPO:0005642"}


id: SO:0002074
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that falls in an intergenic region that is 1 kb or less between 2 genes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic_1kb_variant","synonyms":[{"name":"ANNOVAR:upstream;downstream","type":"exact"}],"termid":"SO:0002074"}


id: MONDO:0019983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"multiloculated renal cyst","secondary_identifiers":["GARD:19376","MEDGEN:609113","UMLS:C0431719","NANDO:2200171","Orphanet:97366","SCTID:86463003"],"synonyms":[{"name":"multilocular cyst of the kidney","type":"exact"},{"name":"multilocular renal cyst","type":"exact"}],"termid":"MONDO:0019983","xrefs":{"Monarch":{"xref_id":"0019983"}}}


id: MOD:00720
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively oxygenates an L-methionine residue to L-methionine sulfoxide R-diastereomer.","definition_xrefs":["PubMed:21406390","PubMed:23911929","ChEBI:45764","PubMed:22116028","RESID:AA0581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfoxide","termid":"MOD:00719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine (R)-sulfoxide","synonyms":[{"name":"(2S)-2-amino-4-[(R)-methylsulfinyl]butanoic acid","type":"exact"},{"name":"L-methionine (R)-S-oxide","type":"exact"},{"name":"L-methionine (R)-sulfoxide","type":"exact"},{"name":"MOD_RES Methionine (R)-sulfoxide","type":"exact"},{"name":"R-MetO","type":"exact"}],"termid":"MOD:00720"}


id: PBO:0091124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein Rsa1","termid":"PBO:0091124"}


id: MONDO:0970952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 91","secondary_identifiers":["UMLS:C5935623","DOID:0070590","MEDGEN:1862682","OMIM:620838"],"termid":"MONDO:0970952","xrefs":{"Monarch":{"xref_id":"0970952"}}}


id: PBO:0017893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation dependent mannose-6-phosphate cargo receptor Mrl1 (predicted)","termid":"PBO:0017893"}


id: GO:0010097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a floral organ primordium acquires stamen or staminode identity. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of floral organ identity","termid":"GO:0010093"},{"relation_name":"part_of","term_name":"stamen formation","termid":"GO:0048455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of stamen identity","termid":"GO:0010097"}


id: GO:0005489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of electrons into, out of, within or between cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transporter activity (obsolete GO:0005489)","synonyms":[{"name":"Rieske iron-sulfur protein","type":"related"},{"name":"class I cytochrome c","type":"related"},{"name":"class II cytochrome c","type":"related"},{"name":"class III cytochrome c","type":"related"},{"name":"class IIa cytochrome c","type":"related"},{"name":"class IIb cytochrome c","type":"related"},{"name":"class IV cytochrome c","type":"related"},{"name":"cytochrome b","type":"related"},{"name":"cytochrome b5","type":"related"},{"name":"cytochrome c3 (tetraheme)","type":"related"},{"name":"cytochrome c554","type":"related"},{"name":"cytochrome c7 (triheme)","type":"related"},{"name":"cytochrome d","type":"related"},{"name":"diheme class I cytochrome c","type":"related"},{"name":"electron transfer carrier","type":"related"},{"name":"electron transporter activity","type":"exact"},{"name":"flavin-containing electron transporter","type":"related"},{"name":"flavodoxin","type":"related"},{"name":"high-molecular-weight cytochrome c (hexadecaheme)","type":"related"},{"name":"monoheme class I cytochrome c","type":"related"},{"name":"nonaheme cytochrome c","type":"related"},{"name":"respiratory chain cytochrome b6","type":"related"}],"termid":"GO:0005489"}


id: GO:0031746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 cysteinyl leukotriene receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteinyl leukotriene receptor binding","termid":"GO:0031745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 1 cysteinyl leukotriene receptor binding","synonyms":[{"name":"type 1 cysteinyl leukotriene receptor ligand","type":"narrow"}],"termid":"GO:0031746"}


id: MONDO:0044912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that has spread to the spinal cord from another anatomic site or system. Representative examples include carcinoma, lymphoma, and melanoma.","definition_xrefs":["NCIT:C4585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord cancer","termid":"MONDO:0003544"},{"relation_name":"is_a","term_name":"metastatic malignant neoplasm","termid":"MONDO:0024880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"metastatic malignant neoplasm in the spinal cord","secondary_identifiers":["SCTID:94600009","UMLS:C0347016","MEDGEN:138075"],"synonyms":[{"name":"Metastatic malignant neoplasm in the spinal cord","type":"exact"},{"name":"Metastatic malignant neoplasm to the spinal cord","type":"exact"},{"name":"Metastatic neoplasm to the spinal cord","type":"exact"},{"name":"Metastatic tumor to the spinal cord","type":"exact"},{"name":"Metastatic tumour to the spinal cord","type":"exact"},{"name":"Secondary malignant neoplasm to the spinal cord","type":"exact"},{"name":"Secondary malignant tumor to the spinal cord","type":"exact"},{"name":"Secondary malignant tumour to the spinal cord","type":"exact"},{"name":"metastasis to spinal cord","type":"exact"}],"termid":"MONDO:0044912","xrefs":{"Monarch":{"xref_id":"0044912"}}}


id: MONDO:0010850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculomaxillofacial dysostosis","termid":"MONDO:0015824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Tessier number 4 facial cleft","secondary_identifiers":["MEDGEN:1642051","DOID:0111706","icd11.foundation:1796306367","Orphanet:141258","GARD:16974","OMIM:600251","UMLS:C4703420"],"synonyms":[{"name":"OBLFC1","type":"related"},{"name":"facial clefting, oblique, 1","type":"related"},{"name":"facial clefting, oblique, type 1","type":"exact"},{"name":"oculomaxillofacial dysplasia with oblique Facial clefts","type":"related"}],"termid":"MONDO:0010850","xrefs":{"Monarch":{"xref_id":"0010850"}}}


id: MONDO:0006490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma arising from the vagina. Human papillomavirus infection is associated with the development of vaginal intraepithelial neoplasia and invasive squamous cell carcinoma. Signs and symptoms include painless bleeding, postcoital bleeding, and urinary tract symptoms. Morphologically it resembles squamous cell carcinomas in other anatomic sites. Radiation therapy is the preferred treatment for most cases. The prognosis is related to the stage of the disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal squamous tumor","termid":"MONDO:0001806"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"vaginal carcinoma","termid":"MONDO:0015867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vaginal squamous cell carcinoma","secondary_identifiers":["SCTID:105121000119102","ONCOTREE:VSC","NCIT:C7736","UMLS:C0238518","EFO:1000620","NCIT:C180915","MEDGEN:66775"],"synonyms":[{"name":"carcinoma of vagina squamous cell","type":"exact"},{"name":"epidermoid carcinoma of the vagina","type":"exact"},{"name":"epidermoid carcinoma of vagina","type":"exact"},{"name":"epidermoid cell carcinoma of the vagina","type":"exact"},{"name":"epidermoid cell carcinoma of vagina","type":"exact"},{"name":"squamous cell carcinoma of the vagina","type":"exact"},{"name":"squamous cell carcinoma of the vulva/vagina","type":"related"},{"name":"squamous cell carcinoma of vagina","type":"exact"},{"name":"vagina epidermoid carcinoma","type":"exact"},{"name":"vagina epidermoid cell carcinoma","type":"exact"},{"name":"vagina squamous cell carcinoma","type":"exact"},{"name":"vaginal epidermoid carcinoma","type":"exact"},{"name":"vaginal epidermoid cell carcinoma","type":"exact"},{"name":"vaginal squamous cell cancer","type":"exact"},{"name":"vaginal squamous cell cancer, NOS","type":"exact"},{"name":"vaginal squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0006490","xrefs":{"Monarch":{"xref_id":"0006490"}}}


