# terms

id: GO:0042489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages which are borne on the jaws, or on other bones in the walls of the mouth or pharynx.","definition_xrefs":["GOC:jl","GOC:mtg_sensu","PMID:15355794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of odontogenesis","termid":"GO:0042483"},{"relation_name":"is_a","term_name":"regulation of odontogenesis of dentin-containing tooth","termid":"GO:0042487"},{"relation_name":"negatively_regulates","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of odontogenesis of dentin-containing tooth","synonyms":[{"name":"down regulation of odontogenesis","type":"broad"},{"name":"down-regulation of odontogenesis","type":"broad"},{"name":"downregulation of odontogenesis","type":"broad"},{"name":"inhibition of odontogenesis","type":"broad"},{"name":"negative regulation of odontogenesis","type":"broad"},{"name":"negative regulation of odontogenesis of dentine-containing teeth","type":"exact"},{"name":"negative regulation of odontogenesis of dentine-containing tooth","type":"related"}],"termid":"GO:0042489"}


id: GO:0051093
data:
  {"annotated_genes":["SJAG_02169","SJAG_00855","SJAG_00304","SJAG_04140","SJAG_04203"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[91051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[116692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[106819,102386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010637"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of development, the biological process whose specific outcome is the progression of an organism over time from an initial condition (e.g. a zygote, or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"negatively_regulates","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00304":null,"SJAG_00855":null,"SJAG_02169":null,"SJAG_04140":null,"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of developmental process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of developmental process","type":"exact"},{"name":"down-regulation of developmental process","type":"exact"},{"name":"downregulation of developmental process","type":"exact"},{"name":"inhibition of developmental process","type":"narrow"}],"termid":"GO:0051093","terms_by_termid":{"GO:0010637":null,"GO:0051517":null,"GO:0075297":null,"GO:0090258":null}}


id: GO:0006605
data:
  {"annotated_genes":["SJAG_02330","SJAG_01282","SJAG_00891","SJAG_04129","SJAG_03358","SJAG_04072","SJAG_03396","SJAG_02397","SJAG_01733","SJAG_16459","SJAG_04533","SJAG_00326","SJAG_00204","SJAG_04451","SJAG_03976","SJAG_01840","SJAG_00895","SJAG_03648","SJAG_03737","SJAG_01088","SJAG_01229","SJAG_03781","SJAG_01981","SJAG_02354","SJAG_00208","SJAG_01004","SJAG_00108","SJAG_00380","SJAG_03411","SJAG_01641","SJAG_00360","SJAG_02208","SJAG_03955","SJAG_03250","SJAG_07010","SJAG_00181","SJAG_03385","SJAG_00959","SJAG_04641","SJAG_03970","SJAG_01750","SJAG_01496","SJAG_03684","SJAG_02456","SJAG_02588","SJAG_02809","SJAG_01112","SJAG_01281","SJAG_00603","SJAG_02320","SJAG_01488","SJAG_01558","SJAG_01367","SJAG_01527","SJAG_04552","SJAG_01759","SJAG_00064","SJAG_02693","SJAG_05259","SJAG_02867","SJAG_05210","SJAG_04763","SJAG_01349","SJAG_03315","SJAG_00175","SJAG_01782","SJAG_01299","SJAG_01360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68589],"is_not":false,"summary":null,"term":"GO:0006605"},{"annotations":[98242,107664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006613"},{"annotations":[88408,91395,114834,113692,88443,88330,91965,106113,91830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[96068,109996,109707,79852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006620"},{"annotations":[80609,98379,108678,73526,97664],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"},{"annotations":[80308,70245,78546,80538,77191,102546],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006627"},{"annotations":[70075,69539,87967,98692,112944,98742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045047"},{"annotations":[71488,96231,75226,60356,73334,75370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006612"},{"annotations":[67568,98722,102800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006626"},{"annotations":[103436,90753,90761,95763,97288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006625"},{"annotations":[91331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"},{"annotations":[75927,78453,74291,73153,77592,71626,80689,96884,77930,77465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[69329,73345,94609,109997,66598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[115518,91958,114754],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[102925,108680,73541,75767,98381,74032],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The process of targeting specific proteins to particular regions of the cell, typically membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization","termid":"GO:0045184"}],"gene_count":68,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00108":null,"SJAG_00175":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00326":null,"SJAG_00360":null,"SJAG_00380":null,"SJAG_00603":null,"SJAG_00891":null,"SJAG_00895":null,"SJAG_00959":null,"SJAG_01004":null,"SJAG_01088":null,"SJAG_01112":null,"SJAG_01229":null,"SJAG_01281":null,"SJAG_01282":null,"SJAG_01299":null,"SJAG_01349":null,"SJAG_01360":null,"SJAG_01367":null,"SJAG_01488":null,"SJAG_01496":null,"SJAG_01527":null,"SJAG_01558":null,"SJAG_01641":null,"SJAG_01733":null,"SJAG_01750":null,"SJAG_01759":null,"SJAG_01782":null,"SJAG_01840":null,"SJAG_01981":null,"SJAG_02208":null,"SJAG_02320":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02397":null,"SJAG_02456":null,"SJAG_02588":null,"SJAG_02693":null,"SJAG_02809":null,"SJAG_02867":null,"SJAG_03250":null,"SJAG_03315":null,"SJAG_03358":null,"SJAG_03385":null,"SJAG_03396":null,"SJAG_03411":null,"SJAG_03648":null,"SJAG_03684":null,"SJAG_03737":null,"SJAG_03781":null,"SJAG_03955":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04072":null,"SJAG_04129":null,"SJAG_04451":null,"SJAG_04533":null,"SJAG_04552":null,"SJAG_04641":null,"SJAG_04763":null,"SJAG_05210":null,"SJAG_05259":null,"SJAG_07010":null,"SJAG_16459":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein targeting","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Protein_targeting"],"synonyms":[{"name":"nascent polypeptide association","type":"related"},{"name":"protein sorting along secretory pathway","type":"narrow"}],"termid":"GO:0006605","terms_by_termid":{"GO:0006605":null,"GO:0006612":null,"GO:0006613":null,"GO:0006614":null,"GO:0006616":null,"GO:0006617":null,"GO:0006620":null,"GO:0006623":null,"GO:0006625":null,"GO:0006626":null,"GO:0006627":null,"GO:0031204":null,"GO:0044395":null,"GO:0045047":null,"GO:0120113":null}}


id: PBO:0061794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odontogenic, ameloblast associated","termid":"PBO:0061794"}


id: PBO:0062790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 4","termid":"PBO:0062790"}


id: GO:0052151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the normal execution of host apoptosis, leading to an increase in the frequency, rate or extent of apoptosis in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:18037263","PMID:29571981","PMID:19801898","PMID:11805081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated killing of host cell","termid":"GO:0001907"},{"relation_name":"is_a","term_name":"symbiont-mediated activation of host programmed cell death","termid":"GO:0052042"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host apoptosis","termid":"GO:0052150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host apoptosis","secondary_identifiers":["GO:0052030","GO:0033669","GO:0039651","GO:0060139"],"synonyms":[{"name":"activation by organism of host apoptosis","type":"exact"},{"name":"activation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"activation by symbiont of host apoptosis","type":"narrow"},{"name":"induction by organism of host apoptotic programmed cell death","type":"exact"},{"name":"induction by symbiont of host apoptosis","type":"exact"},{"name":"positive regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"positive regulation by symbiont of host apoptosis","type":"narrow"},{"name":"positive regulation by symbiont of host apoptotic process","type":"exact"},{"name":"positive regulation by virus of host apoptosis","type":"narrow"},{"name":"stimulation by symbiont of host apoptosis","type":"narrow"},{"name":"up regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"up regulation by symbiont of host apoptosis","type":"exact"},{"name":"up-regulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"up-regulation by symbiont of host apoptosis","type":"exact"},{"name":"upregulation by organism of host apoptotic programmed cell death","type":"exact"},{"name":"upregulation by symbiont of host apoptosis","type":"exact"}],"termid":"GO:0052151"}


id: PR:O94248
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A midasin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04871","PANTHER:PTHR22908:SF14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midasin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.08","secondary_identifiers":["UniProtKB:O94248"],"synonyms":[{"name":"MIDAS-containing protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MDN1","type":"exact"}],"termid":"PR:O94248"}


id: PBO:0053313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA, regulator of reprogramming","termid":"PBO:0053313"}


id: MONDO:0005789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the liver in humans caused by hepatitis delta virus, a defective RNA virus that can only infect hepatitis B patients. For its viral coating, hepatitis delta virus requires the hepatitis B surface antigens produced by these patients. Hepatitis D can occur either concomitantly with (coinfection) or subsequent to (superinfection) hepatitis B infection. Similar to hepatitis B, it is primarily transmitted by parenteral exposure, such as transfusion of contaminated blood or blood products, but can also be transmitted via sexual or intimate personal contact.","definition_xrefs":["MESH:D003699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral hepatitis","termid":"MONDO:0006011"},{"relation_name":"is_a","term_name":"post-viral disorder","termid":"MONDO:0021674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatitis D virus infection","secondary_identifiers":["Orphanet:402823","ICD9:070.52","UMLS:C0011226","GARD:21716","DOID:2047","SCTID:707341005","MEDGEN:4182","EFO:0007304"],"synonyms":[{"name":"HDV","type":"exact"},{"name":"Hepatitis D","type":"exact"},{"name":"Hepatitis D virus","type":"exact"},{"name":"Hepatitis delta virus caused hepatitis","type":"exact"},{"name":"Hepatitis delta virus hepatitis","type":"exact"},{"name":"delta hepatitis","type":"exact"},{"name":"hepatitis delta","type":"exact"},{"name":"hepatitis type D","type":"exact"}],"termid":"MONDO:0005789","xrefs":{"Monarch":{"xref_id":"0005789"}}}


id: PBO:0044074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage stimulation factor subunit 2","termid":"PBO:0044074"}


id: PBO:0049951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia inducible factor 1 subunit alpha inhibitor","termid":"PBO:0049951"}


id: MONDO:0016756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inherited nervous system cancer-predisposing syndrome (obsolete MONDO:0016756)","secondary_identifiers":["Orphanet:252190"],"termid":"MONDO:0016756","xrefs":{"Monarch":{"xref_id":"0016756"}}}


id: GO:1902082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of calcium ion import into sarcoplasmic reticulum.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:8349590","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport","termid":"GO:0051928"},{"relation_name":"is_a","term_name":"regulation of calcium ion import into sarcoplasmic reticulum","termid":"GO:1902080"},{"relation_name":"positively_regulates","term_name":"calcium ion import into sarcoplasmic reticulum","termid":"GO:1990036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of calcium ion import into sarcoplasmic reticulum","synonyms":[{"name":"activation of calcium ion import into sarcoplasmic reticulum","type":"narrow"},{"name":"up regulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"up-regulation of calcium ion import into sarcoplasmic reticulum","type":"exact"},{"name":"upregulation of calcium ion import into sarcoplasmic reticulum","type":"exact"}],"termid":"GO:1902082"}


id: PBO:0091726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, expressed in late meiosis and quiescence","termid":"PBO:0091726"}


id: MONDO:0044315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniosynostosis is a primary abnormality of skull growth involving premature fusion of the cranial sutures such that the growth velocity of the skull often cannot match that of the developing brain. This produces skull deformity and, in some cases, raises intracranial pressure, which must be treated promptly to avoid permanent neurodevelopmental disability (summary by {1:Fitzpatrick, 2013}).nnFor a discussion of genetic heterogeneity of craniosynostosis, see CRS1 (OMIM:123100).","definition_xrefs":["OMIM:617439"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"craniosynostosis","termid":"MONDO:0015469"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniosynostosis 7","secondary_identifiers":["MEDGEN:1392447","UMLS:C4479496","DOID:0060912"],"synonyms":[{"name":"CRS7","type":"related"},{"name":"Crs7, digenic","type":"related"},{"name":"craniosynostosis 7","type":"exact"},{"name":"craniosynostosis 7, digenic","type":"related"},{"name":"craniosynostosis 7, susceptibility to","type":"exact"}],"termid":"MONDO:0044315","xrefs":{"Monarch":{"xref_id":"0044315"}}}


id: MONDO:0019327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"phakomatosis pigmentovascularis","termid":"MONDO:0017318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"phakomatosis spilorosea","secondary_identifiers":["GARD:19025","icd11.foundation:1064958823","ICD9:759.6","MEDGEN:825608","UMLS:C3839763","Orphanet:79485","SCTID:703285005"],"synonyms":[{"name":"phakomatosis pigmentovascularis type 3","type":"exact"}],"termid":"MONDO:0019327","xrefs":{"Monarch":{"xref_id":"0019327"}}}


id: GO:0035712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a T helper 2 cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.","definition_xrefs":["CL:0000546","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 2 cell activation","synonyms":[{"name":"Th2 cell activation","type":"exact"}],"termid":"GO:0035712"}


id: GO:0035680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a posterior lateral line neuromast hair cell progresses from its initial formation to its mature state. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell morphogenesis","termid":"GO:0035678"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast hair cell development","termid":"GO:0035677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast hair cell morphogenesis","termid":"GO:0035680"}


id: GO:0072242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a metanephric distal convoluted tubule cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DCT cell fate commitment","termid":"GO:0072146"},{"relation_name":"part_of","term_name":"metanephric DCT cell differentiation","termid":"GO:0072240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric DCT cell fate commitment","synonyms":[{"name":"metanephric distal convoluted tubule cell fate commitment","type":"exact"}],"termid":"GO:0072242"}


id: GO:0004160
data:
  {"annotated_genes":["SJAG_04098"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71592],"is_not":false,"summary":null,"term":"GO:0004160"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-2,3-dihydroxy-3-methylbutanoate = 3-methyl-2-oxobutanoate + H2O.","definition_xrefs":["RHEA:24809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04098":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"dihydroxy-acid dehydratase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:DIHYDROXYISOVALDEHYDRAT-RXN","EC:4.2.1.9"],"synonyms":[{"name":"2,3-dihydroxy-acid hydro-lyase (3-methyl-2-oxobutanoate-forming)","type":"related"},{"name":"2,3-dihydroxy-acid hydro-lyase activity","type":"related"},{"name":"2,3-dihydroxyisovalerate dehydratase activity","type":"related"},{"name":"DHAD","type":"related"},{"name":"acetohydroxyacid dehydratase activity","type":"related"},{"name":"alpha,beta-dihydroxyacid dehydratase activity","type":"related"},{"name":"alpha,beta-dihydroxyisovalerate dehydratase activity","type":"related"},{"name":"dihydroxy acid dehydrase activity","type":"related"}],"termid":"GO:0004160","terms_by_termid":{"GO:0004160":null}}


id: PBO:0028333
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_phosphorylation_during_cellular_response_to_methylglyoxal","termid":"PBO:0028333"}


id: PBO:0040380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5PO pseudogene 1","termid":"PBO:0040380"}


id: GO:0102850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (9Z)-octadecenoyl-containing glycerolipid + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = a (9Z,12Z)-octadecadienoyl-containing glycerolipid + 2 H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:46376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"acyl-lipid (n+3)-(Z)-desaturase (ferredoxin) activity","secondary_identifiers":["EC:1.14.19.23"],"synonyms":[{"name":"1-18:1-2-16:0-phosphatidylglycerol omega-6 desaturase activity","type":"exact"}],"termid":"GO:0102850"}


id: GO:0075147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism modulates the frequency, rate or extent of its signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of signal transduction in response to host (obsolete GO:0075147)","synonyms":[{"name":"regulation of symbiont signal transduction in response to host","type":"exact"}],"termid":"GO:0075147"}


id: PBO:0069471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 738, pseudogene","termid":"PBO:0069471"}


id: GO:0062230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of larval somatic muscle development.","definition_xrefs":["PMID:16643882","PMID:25758712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of somatic muscle development","termid":"GO:0062225"},{"relation_name":"is_a","term_name":"regulation of larval somatic muscle development","termid":"GO:0062229"},{"relation_name":"negatively_regulates","term_name":"larval somatic muscle development","termid":"GO:0007526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of larval somatic muscle development","termid":"GO:0062230"}


id: GO:0006308
data:
  {"annotated_genes":["SJAG_01044","SJAG_01163","SJAG_01948"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62586,105587],"is_not":false,"summary":null,"term":"GO:0006308"},{"annotations":[90703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032043"}]},"cv_name":"biological_process","definition":"The cellular DNA metabolic process resulting in the breakdown of DNA, deoxyribonucleic acid, one of the two main types of nucleic acid, consisting of a long unbranched macromolecule formed from one or two strands of linked deoxyribonucleotides, the 3'-phosphate group of each constituent deoxyribonucleotide being joined in 3',5'-phosphodiester linkage to the 5'-hydroxyl group of the deoxyribose moiety of the next one.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"nucleic acid catabolic process","termid":"GO:0141188"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01044":null,"SJAG_01163":null,"SJAG_01948":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA catabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA breakdown","type":"exact"},{"name":"DNA catabolism","type":"exact"},{"name":"DNA degradation","type":"exact"}],"termid":"GO:0006308","terms_by_termid":{"GO:0006308":null,"GO:0032043":null}}


id: MONDO:0032686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 35","secondary_identifiers":["UMLS:C5193038","MEDGEN:1679765","OMIM:618341","DOID:0111914"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 35","type":"related"},{"name":"SPGF35","type":"related"}],"termid":"MONDO:0032686","xrefs":{"Monarch":{"xref_id":"0032686"}}}


id: FYPO:0000686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","termid":"FYPO:0000686"}


id: SO:0001578
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where at least one base of the terminator codon (stop) is changed, resulting in an elongated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminator_codon_variant","termid":"SO:0001590"},{"relation_name":"is_a","term_name":"feature_elongation","termid":"SO:0001907"},{"relation_name":"is_a","term_name":"nonsynonymous_variant","termid":"SO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_lost","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://snpeff.sourceforge.net/SnpEff_manual.html","http://vat.gersteinlab.org/formats.php","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:stoploss","type":"exact"},{"name":"Jannovar:stop_lost","type":"exact"},{"name":"Seattleseq:stop-lost","type":"exact"},{"name":"Seattleseq:stop-lost-near-splice","type":"related"},{"name":"VAAST:stop_lost","type":"exact"},{"name":"VAT:removedStop","type":"exact"},{"name":"VEP:stop_lost","type":"exact"},{"name":"snpEff:STOP_LOST","type":"exact"},{"name":"stop codon lost","type":"exact"},{"name":"stop lost","type":"exact"}],"termid":"SO:0001578"}


id: PBO:0011987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family recombinase Rad51/Rhp51","termid":"PBO:0011987"}


id: GO:0000467
data:
  {"annotated_genes":["SJAG_02993","SJAG_00854","SJAG_04369","SJAG_03745","SJAG_03179","SJAG_00081","SJAG_04321","SJAG_04006","SJAG_04818","SJAG_04824","SJAG_04153","SJAG_01521","SJAG_04084","SJAG_01191","SJAG_01818"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71269,71640,72093,72880,75430,78034,79844,90302,97570,99273,102419,106829,107816,115831,116270],"is_not":false,"summary":null,"term":"GO:0000467"}]},"cv_name":"biological_process","definition":"Exonucleolytic digestion of a pre-rRNA molecule to generate the mature 3'-end of a 5.8S rRNA molecule derived from an originally tricistronic pre-rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:krc","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 3'-end processing","termid":"GO:0031125"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04369":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0010467","GO:0042254"],"is_obsolete":false,"name":"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000467","terms_by_termid":{"GO:0000467":null}}


id: GO:0030964
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integral membrane complex that possesses NADH oxidoreductase activity. The complex is one of the components of the electron transport chain. It catalyzes the transfer of a pair of electrons from NADH to a quinone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NADH dehydrogenase complex","secondary_identifiers":["Wikipedia:NADH_dehydrogenase","GO:0030966","GO:0031678","GO:0030025","GO:0031675","GO:0031677","GO:0045280"],"synonyms":[{"name":"NADH dehydrogenase complex (plastoquinone)","type":"narrow"},{"name":"NADH dehydrogenase complex (quinone)","type":"narrow"},{"name":"NADH dehydrogenase complex (ubiquinone)","type":"narrow"},{"name":"NADH:plastoquinone reductase complex","type":"narrow"},{"name":"plastid NADH dehydrogenase complex (plastoquinone)","type":"narrow"}],"termid":"GO:0030964"}


id: PBO:0116407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar/ prevavuolar endosome sodium/potassium ion/proton antiporter Nhx1","termid":"PBO:0116407"}


id: GO:0004531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to 3'-phosphodinucleotide and 3'-phosphooligonucleotide end products.","definition_xrefs":["EC:3.1.22.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"deoxyribonuclease II activity","secondary_identifiers":["MetaCyc:3.1.22.1-RXN"],"synonyms":[{"name":"DNase II activity","type":"related"},{"name":"acid DNase activity","type":"related"},{"name":"acid deoxyribonuclease activity","type":"related"},{"name":"deoxyribonucleate 3'-nucleotidohydrolase activity","type":"related"},{"name":"lysosomal DNase II activity","type":"narrow"},{"name":"pancreatic DNase II","type":"related"}],"termid":"GO:0004531"}


id: GO:1900188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion involved in single-species biofilm formation.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-substrate adhesion","termid":"GO:0010812"},{"relation_name":"is_a","term_name":"regulation of cell adhesion involved in single-species biofilm formation","termid":"GO:1900187"},{"relation_name":"negatively_regulates","term_name":"cell adhesion involved in single-species biofilm formation","termid":"GO:0043709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"down regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"down regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"down-regulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"down-regulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"downregulation of cell adhesion during single-species biofilm formation","type":"related"},{"name":"downregulation of cell adhesion involved in single-species biofilm formation","type":"exact"},{"name":"inhibition of cell adhesion during single-species biofilm formation","type":"related"},{"name":"inhibition of cell adhesion involved in single-species biofilm formation","type":"narrow"},{"name":"negative regulation of cell adhesion during single-species biofilm formation","type":"related"}],"termid":"GO:1900188"}


id: GO:0071309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phylloquinone (vitamin K1) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to phylloquinone","termid":"GO:0032573"},{"relation_name":"is_a","term_name":"cellular response to vitamin K","termid":"GO:0071307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to phylloquinone","synonyms":[{"name":"cellular response to vitamin K1","type":"exact"}],"termid":"GO:0071309"}


id: MONDO:0033615
data:
  {"annotated_genes":["SJAG_01043"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86203],"is_not":false,"summary":null,"term":"MONDO:0033615"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme Q10 deficiency","termid":"MONDO:0018151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01043":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"coenzyme q10 deficiency, primary, 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112138","OMIM:619028","UMLS:C5436638","GARD:16403","MEDGEN:1740444"],"synonyms":[{"name":"COQ10D9","type":"exact"}],"termid":"MONDO:0033615","terms_by_termid":{"MONDO:0033615":null},"xrefs":{"Monarch":{"xref_id":"0033615"}}}


id: PBO:NCBI Taxonomy id
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase organism property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxon_id","termid":"PBO:NCBI Taxonomy id"}


id: PBO:0083642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eisosome core component; eisosomes are large immobile patch structures at the cell cortex associated with endocytosis; phosphorylated on Thr233 upon Pkc1p hyperactivation in a Slt2p MAPK-dependent fashion; null mutants show activation of Pkc1p/Ypk1p stress resistance pathways; member of the BAR domain family","termid":"PBO:0083642"}


id: MONDO:0004023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hepatoblastoma (obsolete MONDO:0004023)","termid":"MONDO:0004023","xrefs":{"Monarch":{"xref_id":"0004023"}}}


id: PR:O60165
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spn7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.01c","synonyms":[{"name":"Spom972h-spn7","type":"exact"}],"termid":"PR:O60165"}


id: PR:O59932
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ght4 gene.","definition_xrefs":["UniProtKB:O59932","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-affinity hexose transporter ght4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.08","synonyms":[{"name":"Spom972h-ght4","type":"exact"},{"name":"hexose transporter 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59932"}


id: MONDO:0014892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002320"],"is_obsolete":false,"name":"micrognathia-recurrent infections-behavioral abnormalities-mild intellectual disability syndrome","secondary_identifiers":["MEDGEN:934707","GARD:17850","UMLS:C4310740","DOID:0070074","Orphanet:476126","OMIM:617061"],"synonyms":[{"name":"MEBAS","type":"exact"},{"name":"MRD44","type":"exact"},{"name":"autosomal dominant intellectual disability 44","type":"exact"},{"name":"autosomal dominant mental retardation 44","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 44","type":"related"},{"name":"intellectual developmental disorder, autosomal dominant 44, with microcephaly","type":"exact"},{"name":"intellectual disability, autosomal dominant 44","type":"related"},{"name":"mental retardation, autosomal dominant 44","type":"related"},{"name":"mercer-Ba syndrome","type":"exact"}],"termid":"MONDO:0014892","xrefs":{"Monarch":{"xref_id":"0014892"}}}


id: PR:P36589
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc14 gene.","definition_xrefs":["UniProtKB:P36589","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.07","synonyms":[{"name":"Spom972h-cdc14","type":"exact"}],"termid":"PR:P36589"}


id: GO:0007471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which the anatomical structures of the first or anterior segment of the insect thorax are generated and organized.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete prothoracic morphogenesis (obsolete GO:0007471)","synonyms":[{"name":"prothoracic morphogenesis","type":"exact"}],"termid":"GO:0007471"}


id: GO:1990417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The release of snoRNA from pre-rRNA.","definition_xrefs":["GOC:rb","PMID:16908538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"snoRNA release from pre-rRNA","termid":"GO:1990417"}


id: FYECO:0000039
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which P-factor was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ mating pheromone","termid":"FYECO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ P-factor","synonyms":[{"name":"P factor added","type":"exact"}],"termid":"FYECO:0000039"}


id: GO:0097205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which fluid circulating through the body is filtered through a barrier system.","definition_xrefs":["GOC:sart","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal filtration","termid":"GO:0097205"}


id: MOD:01393
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two serine residues and a cysteine residue by formation of a pyridine-2,5-dicarboxylic acid.","definition_xrefs":["PubMed:1880060","PubMed:10625477","PubMed:7844053","RESID:AA0470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridinyl ring crosslinked residues","termid":"MOD:01425"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine pyridine-2,5-dicarboxylic acid","synonyms":[{"name":"6-[(1R)-1-amino-2-sulfanylethyl]pyridine-2,5-dicarboxylic acid","type":"exact"},{"name":"L-cysteine pyridine-2,5-dicarboxylic acid","type":"exact"}],"termid":"MOD:01393"}


id: PBO:0085744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in vesicular transport; mediates transport between an endosomal compartment and the Golgi, contains a Golgi-localization (GRIP) domain that interacts with activated Arl1p-GTP to localize Imh1p to the Golgi","termid":"PBO:0085744"}


id: FYPO:0001554
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which tRNA processing is abnormal. tRNA processing is the conversion a primary tRNA transcript into a mature tRNA molecules.","definition_xrefs":["GO:0008033","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abnormal tRNA processing","synonyms":[{"name":"abnormal tRNA processing during mitotic cell cycle","type":"related"},{"name":"abnormal tRNA processing during vegetative growth","type":"exact"}],"termid":"FYPO:0001554"}


id: PBO:0064230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C eta 1","termid":"PBO:0064230"}


id: SO:0000267
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a phenylalanine anticodon, and a 3' phenylalanine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"phenylalanine_tRNA_primary_transcript","termid":"SO:0000224"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanyl_tRNA","synonyms":[{"name":"phenylalanyl tRNA","type":"exact"},{"name":"phenylalanyl-transfer RNA","type":"exact"},{"name":"phenylalanyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000267"}


id: MONDO:0015436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 20 syndrome is marked by a characteristic seizure phenotype. Depending on the amount of chromosomal loss and associated mosaicism, ring(20) can be associated with macrocephaly, mild to moderate intellectual deficit, or behavioral problems. In rare cases, brain, kidney or heart malformations may be present.","definition_xrefs":["Orphanet:1444"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"chromosome 20 disorder","termid":"MONDO:0700025"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 20","secondary_identifiers":["GARD:1334","MEDGEN:489853","UMLS:C0265482","MESH:C580424","NANDO:1200597","NCIT:C169001","ICD9:758.89","SCTID:23686004"],"synonyms":[{"name":"R20","type":"related"},{"name":"chromosome 20 ring","type":"related"},{"name":"ring 20","type":"related"},{"name":"ring chromosome 20 syndrome","type":"exact"},{"name":"ring chromosome type 20","type":"exact"}],"termid":"MONDO:0015436","xrefs":{"Monarch":{"xref_id":"0015436"}}}


id: MONDO:0018404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare genetic male infertility.","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic male infertility (obsolete MONDO:0018404)","secondary_identifiers":["Orphanet:399980"],"synonyms":[{"name":"rare genetic male infertility","type":"exact"}],"termid":"MONDO:0018404","xrefs":{"Monarch":{"xref_id":"0018404"}}}


id: MONDO:0100307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adult Refsum disease in which the cause of the disease is a mutation in the PEX7 gene.","definition_xrefs":["PMID:12522768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX7 defect","termid":"MONDO:0100272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0006025","MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"adult Refsum disease due to PEX7 defect","synonyms":[{"name":"adult Refsum disease due to PEX7 defect","type":"exact"}],"termid":"MONDO:0100307","xrefs":{"Monarch":{"xref_id":"0100307"}}}


id: GO:0010743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of macrophage derived foam cell differentiation. Macrophage derived foam cell differentiation is the process in which a macrophage acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:BHF","GOC:add","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"macrophage derived foam cell differentiation","termid":"GO:0010742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage derived foam cell differentiation","termid":"GO:0010743"}


id: PBO:0074551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 4","termid":"PBO:0074551"}


id: PBO:0046063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 2","termid":"PBO:0046063"}


id: PBO:0077040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THOC7 antisense RNA 1","termid":"PBO:0077040"}


id: PATO:0001894
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"biological sex","termid":"PATO:0000047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenotypic sex","termid":"PATO:0001894"}


id: PBO:0043132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor","termid":"PBO:0043132"}


id: GO:1902216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-4-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:17210636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-4-mediated signaling pathway","termid":"GO:1902214"},{"relation_name":"positively_regulates","term_name":"interleukin-4-mediated signaling pathway","termid":"GO:0035771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-4-mediated signaling pathway","synonyms":[{"name":"activation of IL-4-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-4-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-4-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"up regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"up-regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"upregulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-4-mediated signalling pathway","type":"exact"}],"termid":"GO:1902216"}


id: PBO:0038444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angio associated migratory cell protein","termid":"PBO:0038444"}


id: GO:0010486
data:
  {"annotated_genes":["SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91530],"is_not":false,"summary":null,"term":"GO:0010486"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Mn2+(in) + H+(out) = Mn2+(out) + H+(in).","definition_xrefs":["PMID:17559518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"manganese:proton antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"manganese:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0010486","terms_by_termid":{"GO:0010486":null}}


id: GO:2000111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid cell apoptotic process","termid":"GO:0033034"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte apoptotic process","termid":"GO:2000108"},{"relation_name":"is_a","term_name":"regulation of macrophage apoptotic process","termid":"GO:2000109"},{"relation_name":"positively_regulates","term_name":"macrophage apoptotic process","termid":"GO:0071888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage apoptotic process","synonyms":[{"name":"positive regulation of AICD","type":"related"},{"name":"positive regulation of activation-induced cell death","type":"related"},{"name":"positive regulation of macrophage apoptosis","type":"narrow"}],"termid":"GO:2000111"}


id: GO:1901552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell development.","definition_xrefs":["GOC:pr","GOC:TermGenie","PMID:19470579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of endothelial cell development","termid":"GO:1901550"},{"relation_name":"positively_regulates","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell development","synonyms":[{"name":"activation of endothelial cell development","type":"narrow"},{"name":"up regulation of endothelial cell development","type":"exact"},{"name":"up-regulation of endothelial cell development","type":"exact"},{"name":"upregulation of endothelial cell development","type":"exact"}],"termid":"GO:1901552"}


id: MOD:00962
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that by reducing the indole ring system of tryptophan to indoline effectively converts an L-tryptophan residue to 2',3'-dihydrotryptophan.","definition_xrefs":["DeltaMass:343","URL:http://dx.doi.org/10.1016/S0040-4039(00)99113-5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"},{"relation_name":"is_a","term_name":"hydrogenated residue","termid":"MOD:01473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2',3'-dihydrotryptophan","termid":"MOD:00962"}


id: SO:0000503
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000503 alternately_spliced_gene_encodeing_one_transcript (obsolete SO:0000503)","termid":"SO:0000503"}


id: PBO:0081799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 728","termid":"PBO:0081799"}


id: GO:0009051
data:
  {"annotated_genes":["SJAG_02696","SJAG_03852","SJAG_00633","SJAG_02297","SJAG_01824"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73426,80724,97222,97312,98516],"is_not":false,"summary":null,"term":"GO:0009051"}]},"cv_name":"biological_process","definition":"The branch of the pentose-phosphate shunt which involves the oxidation of glucose 6-P and produces ribulose 5-P, reduced NADP+ and carbon dioxide (CO2).","definition_xrefs":["ISBN:0198506732","MetaCyc:OXIDATIVEPENT-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADPH regeneration","termid":"GO:0006740"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"},{"relation_name":"part_of","term_name":"pentose-phosphate shunt","termid":"GO:0006098"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00633":null,"SJAG_01824":null,"SJAG_02297":null,"SJAG_02696":null,"SJAG_03852":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086","GO:0006091"],"is_obsolete":false,"name":"pentose-phosphate shunt, oxidative branch","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"oxidative branch, pentose pathway","type":"exact"},{"name":"oxidative pentose phosphate pathway","type":"exact"},{"name":"pentose phosphate pathway, oxidative branch","type":"exact"},{"name":"pentose phosphate shunt, oxidative branch","type":"exact"},{"name":"pentose-phosphate pathway, oxidative branch","type":"exact"}],"termid":"GO:0009051","terms_by_termid":{"GO:0009051":null}}


id: PBO:0052333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1958","termid":"PBO:0052333"}


id: GO:0010269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from selenium ion.","definition_xrefs":["GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to selenium ion","termid":"GO:0010269"}


id: GO:0097292
data:
  {"annotated_genes":["SJAG_06634","SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75995,108640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving XMP, xanthosine monophosphate.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01298":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"XMP metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"XMP metabolism","type":"exact"}],"termid":"GO:0097292","terms_by_termid":{"GO:0032265":null}}


id: GO:0018110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: histone L-arginine + ATP = histone N(omega)-phospho-L-arginine + ADP + 2 H+.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone arginine kinase activity (obsolete GO:0018110)","synonyms":[{"name":"histone-arginine kinase activity","type":"exact"}],"termid":"GO:0018110"}


id: PBO:0053407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 342","termid":"PBO:0053407"}


id: MONDO:0021280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucoepidermoid carcinoma that involves the parotid gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"major salivary gland mucoepidermoid carcinoma","termid":"MONDO:0006286"},{"relation_name":"is_a","term_name":"carcinoma of parotid gland","termid":"MONDO:0021331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"mucoepidermoid carcinoma of parotid gland","secondary_identifiers":["MEDGEN:277506","NCIT:C5938","SCTID:423793008","UMLS:C1335363","icd11.foundation:135568040"],"synonyms":[{"name":"mucoepidermoid carcinoma of parotid","type":"exact"},{"name":"mucoepidermoid carcinoma of the parotid","type":"exact"},{"name":"mucoepidermoid carcinoma of the parotid gland","type":"exact"},{"name":"parotid gland mucoepidermoid carcinoma","type":"exact"},{"name":"parotid mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0021280","xrefs":{"Monarch":{"xref_id":"0021280"}}}


id: GO:0051222
data:
  {"annotated_genes":["SJAG_03048","SJAG_04312","SJAG_03453","SJAG_01245","SJAG_04464","SJAG_01805","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100779,111389,102192,94136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[91176,94704,102725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"is_a","term_name":"positive regulation of establishment of protein localization","termid":"GO:1904951"},{"relation_name":"positively_regulates","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of protein transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein transport","type":"narrow"},{"name":"stimulation of protein transport","type":"narrow"},{"name":"up regulation of protein transport","type":"exact"},{"name":"up-regulation of protein transport","type":"exact"},{"name":"upregulation of protein transport","type":"exact"}],"termid":"GO:0051222","terms_by_termid":{"GO:0042307":null,"GO:0046827":null}}


id: PBO:0072724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor like tyrosine kinase","termid":"PBO:0072724"}


id: PBO:0056017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM12 pseudogene 1","termid":"PBO:0056017"}


id: MONDO:0013245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"excluded_subClassOf","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"excluded_subClassOf","term_name":"obsolete intractable diarrhea of infancy (obsolete MONDO:0019126)","termid":"MONDO:0019126"},{"relation_name":"excluded_subClassOf","term_name":"autoimmune enteropathy","termid":"MONDO:0019787"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndromic multisystem autoimmune disease due to ITCH deficiency","secondary_identifiers":["UMLS:C3150649","icd11.foundation:1970749000","GARD:10775","OMIM:613385","NANDO:2200739","MEDGEN:461999","Orphanet:228426"],"synonyms":[{"name":"ADMFD","type":"related"},{"name":"ITCH E3 ubiquitin ligase deficiency","type":"related"},{"name":"autoimmune disease, multisystem, with facial dysmorphism","type":"related"},{"name":"autoimmune disease, syndromic multisystem","type":"related"},{"name":"syndromic multisystem autoimmune disease","type":"related"},{"name":"syndromic multisystem autoimmune disease due to ITCH deficiency","type":"exact"}],"termid":"MONDO:0013245","xrefs":{"Monarch":{"xref_id":"0013245"}}}


id: PBO:0031214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_centromeric_outer_repeat_transcript_level","termid":"PBO:0031214"}


id: PBO:0090943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH type zinc finger protein, Prp19 complex subunit, RNA-binding Cwf2","termid":"PBO:0090943"}


id: PBO:0108560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination protein Saw1","termid":"PBO:0108560"}


id: PBO:0087476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of both the ERMES and the SAM complex; component of ERMES complex which acts as a molecular tether between the mitochondria and the ER, necessary for efficient phospholipid exchange between organelles and for mitophagy; SAM/TOB complex component that functions in the assembly of outer membrane beta-barrel proteins; involved in mitochondrial inheritance and morphology; ERMES complex is often co-localized with peroxisomes and concentrated areas of pyruvate dehydrogenase","termid":"PBO:0087476"}


id: PR:Q9USL3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isoleucine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.08c","secondary_identifiers":["UniProtKB:Q9USL3"],"synonyms":[{"name":"IleRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-IARS2","type":"exact"},{"name":"isoleucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USL3"}


id: MONDO:0022208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystal arthropathy","secondary_identifiers":["ICD9:712","SCTID:18834007","ICD9:712.80","ICD9:712.88","ICD9:712.90","MEDGEN:508879","ICD9:712.98","UMLS:C0152087"],"synonyms":[{"name":"Arthritides, Crystal","type":"related"},{"name":"Arthritides, Crystalline","type":"related"},{"name":"Arthritis, Crystal","type":"related"},{"name":"Arthritis, Crystalline","type":"related"},{"name":"Arthropathies, Crystal","type":"related"},{"name":"Arthropathies, Crystalline","type":"related"},{"name":"Arthropathy, Crystal","type":"related"},{"name":"Arthropathy, Crystalline","type":"related"},{"name":"Crystal Arthritides","type":"related"},{"name":"Crystal Arthritis","type":"related"},{"name":"Crystal Arthropathies","type":"related"},{"name":"Crystal Arthropathy","type":"related"},{"name":"Crystal arthropathy","type":"related"},{"name":"Crystal-induced arthritis AND/OR synovitis","type":"related"},{"name":"Crystal-related arthropathy and periarthropathy","type":"related"},{"name":"Crystalline Arthritides","type":"related"},{"name":"Crystalline Arthritis","type":"related"},{"name":"Crystalline Arthropathies","type":"related"},{"name":"Crystalline Arthropathy","type":"related"},{"name":"Crystalline arthritis","type":"related"},{"name":"crystal arthropathy","type":"exact"},{"name":"crystal-induced arthritis and/or synovitis","type":"related"},{"name":"crystal-related arthropathy and periarthropathy","type":"related"},{"name":"crystalline arthritis","type":"related"}],"termid":"MONDO:0022208","xrefs":{"Monarch":{"xref_id":"0022208"}}}


id: GO:0071696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an ectodermal placode over time from its initial formation until its mature state. An ectodermal placode is a thickening of the ectoderm that is the primordium of many structures derived from the ectoderm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ectodermal placode development","termid":"GO:0071696"}


id: PBO:0003791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4/nocturin family endoribonuclease (predicted)","termid":"PBO:0003791"}


id: RO:0002432
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c executes activity in d if and only if c enables p and p occurs_in d.  Assuming no action at a distance by gene products, if a gene product enables (is capable of) a process that occurs in some structure, it must have at least some part in that structure.","definition_xrefs":["GOC:cjm","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"},{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_active_in","synonyms":[{"name":"enables activity in","type":"exact"}],"termid":"RO:0002432"}


id: PBO:0034181
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_developmental_regression_of","termid":"PBO:0034181"}


id: GO:0043640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of benzoate, by its hydroxylation to cis-1,2-dihydroxybenzoate followed by dehydrogenation to catechol.","definition_xrefs":["MetaCyc:PWY-2503","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzoate catabolic process","termid":"GO:0043639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"benzoate catabolic process via hydroxylation","synonyms":[{"name":"benzoate breakdown via hydroxylation","type":"exact"},{"name":"benzoate degradation via hydroxylation","type":"exact"}],"termid":"GO:0043640"}


id: MONDO:0003697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"penis verrucous carcinoma","termid":"MONDO:0003698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"non-invasive verrucous carcinoma of the penis","secondary_identifiers":["DOID:5907","NCIT:C27791","MEDGEN:233765","UMLS:C1334984"],"synonyms":[{"name":"non-invasive penile verrucous carcinoma","type":"exact"},{"name":"non-invasive verrucous carcinoma of penis","type":"exact"},{"name":"non-invasive verrucous carcinoma of the penis","type":"exact"},{"name":"penis non-invasive verrucous carcinoma","type":"related"}],"termid":"MONDO:0003697","xrefs":{"Monarch":{"xref_id":"0003697"}}}


id: RO:0008507
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship in which organism a lays eggs on the outside surface of organism b. Organism b is neither helped nor harmed in the process of egg laying or incubation.","direct_ancestors":[{"relation_name":"is_a","term_name":"visits","termid":"RO:0002618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lays_eggs_on","termid":"RO:0008507"}


id: GO:0061299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the vasculature of the retina is generated and organized.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"retina vasculature development in camera-type eye","termid":"GO:0061298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retina vasculature morphogenesis in camera-type eye","synonyms":[{"name":"retinal vasculature morphogenesis","type":"exact"}],"termid":"GO:0061299"}


id: GO:0051591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cAMP","synonyms":[{"name":"response to 3',5' cAMP","type":"exact"},{"name":"response to 3',5'-cAMP","type":"exact"},{"name":"response to adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"response to cyclic AMP","type":"exact"}],"termid":"GO:0051591"}


id: MONDO:0859275
data:
  {"annotated_genes":["SJAG_04782"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86200],"is_not":false,"summary":null,"term":"MONDO:0859275"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04782":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with spasticity, seizures, and brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620001","UMLS:C5774197","MEDGEN:1823970"],"termid":"MONDO:0859275","terms_by_termid":{"MONDO:0859275":null},"xrefs":{"Monarch":{"xref_id":"0859275"}}}


id: GO:0034632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of retinol from one side of a membrane to the other. Retinol is vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A.","definition_xrefs":["GOC:mah","GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"retinol transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-1467466","Reactome:R-HSA-2466749","Reactome:R-HSA-2466802"],"synonyms":[{"name":"retinol transporter activity","type":"related"},{"name":"vitamin A1 transporter activity","type":"exact"}],"termid":"GO:0034632"}


id: MONDO:0024526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Zimmermann-Laband syndrome in which the cause of the disease is a mutation in the KCNH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zimmermann-Laband syndrome","termid":"MONDO:0000200"},{"relation_name":"is_a","term_name":"KCNH1 associated disorder","termid":"MONDO:0100485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Zimmermann-Laband syndrome 1","secondary_identifiers":["NORD:1344","OMIM:135500","MEDGEN:1639277","GARD:15071","UMLS:C4551773"],"synonyms":[{"name":"KCNH1 Zimmermann-Laband syndrome","type":"exact"},{"name":"Laband Syndrome","type":"exact"},{"name":"Laband syndrome","type":"related"},{"name":"ZLS1","type":"exact"},{"name":"Zimmermann-Laband syndrome 1","type":"exact"},{"name":"Zimmermann-Laband syndrome caused by mutation in KCNH1","type":"exact"},{"name":"fibromatosis, gingival, with abnormal fingers, fingernails, Nose, and ears, and splenomegaly","type":"related"}],"termid":"MONDO:0024526","xrefs":{"Monarch":{"xref_id":"0024526"}}}


id: PBO:0040079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase A","termid":"PBO:0040079"}


id: FYPO:0005117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to is normal (i.e. indistinguishable from wild type) in extent, timing, start or termination site, etc. when the cell is subject to nitrogen starvation. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription","termid":"FYPO:0002882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000294"],"is_obsolete":false,"name":"normal transcription during nitrogen starvation","synonyms":[{"name":"normal transcription during cellular response to nitrogen starvation","type":"exact"},{"name":"normal transcription during nitrogen depletion","type":"exact"},{"name":"normal transcription during nitrogen deprivation","type":"exact"},{"name":"normal transcription during nitrogen limitation","type":"exact"},{"name":"normal transcription in response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0005117"}


id: PBO:0028890
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_swollen_elongated_germ_tube","termid":"PBO:0028890"}


id: GO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase III (Pol III) complex, typically composed of seventeen subunits, and with another protein, macromolecule, or complex, permitting those molecules to function in a coordinated way, Once recruited to an RNA polymerase III promoter by one or more other transcription factors, binds to DNA, recruits RNA polymerase III and facilitates the transition from the closed to the open complex.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete TFIIIB-type transcription factor activity (obsolete GO:0001026)","synonyms":[{"name":"RNA polymerase III recruiting transcription factor activity","type":"exact"}],"termid":"GO:0001026"}


id: PBO:0085964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression suppresses the high-frequency loss of mini-chromosomes, probably by increasing the rate of proper chromosome segregation; translated gene product of YCR041W, but not its transcript, is responsible for suppression; suppression ability of YCR041W is completely dependent on silencing protein Sir4p","termid":"PBO:0085964"}


id: MONDO:0010475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked recessive syndrome caused by loss-of-function mutation(s) in IGSF1, encoding immunoglobulin superfamily member 1. This condition can result in central hypothyroidism, macroorchidism, delayed puberty, and variable prolactin deficiency.","definition_xrefs":["NCIT:C130989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"central congenital hypothyroidism","termid":"MONDO:0016410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked central congenital hypothyroidism with late-onset testicular enlargement","secondary_identifiers":["MEDGEN:763877","OMIM:300888","UMLS:C3550963","Orphanet:329235","GARD:17499","DOID:0111140"],"synonyms":[{"name":"CHTE","type":"exact"},{"name":"IGSF1 deficiency syndrome","type":"exact"},{"name":"Immunoglobulin superfamily member 1 deficiency syndrome","type":"exact"},{"name":"X-linked central congenital hypothyroidism with late-onset macroorchidism","type":"exact"},{"name":"X-linked central congenital hypothyroidism with late-onset testicular enlargement","type":"exact"},{"name":"central hypothyroidism and testicular enlargement","type":"exact"},{"name":"hypothyroidism Central and testicular enlargement","type":"exact"},{"name":"hypothyroidism, central, and testicular enlargement","type":"related"},{"name":"hypothyroidism, central, and testicular enlargement, X-linked recessive","type":"exact"}],"termid":"MONDO:0010475","xrefs":{"Monarch":{"xref_id":"0010475"}}}


id: GO:0018785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: haloacetate + H2O = glycolate + halide.","definition_xrefs":["EC:3.8.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"haloacetate dehalogenase activity","secondary_identifiers":["MetaCyc:HALOACETATE-DEHALOGENASE-RXN","UM-BBD_enzymeID:r1028","UM-BBD_enzymeID:r0004","RHEA:11044"],"synonyms":[{"name":"haloacetate halidohydrolase activity","type":"related"},{"name":"monohaloacetate dehalogenase activity","type":"related"}],"termid":"GO:0018785"}


id: PBO:0072915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor class A member 5","termid":"PBO:0072915"}


id: GO:0002141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stereocilia coupling link that is composed of a fine filament present in developing stereocilia that couples the bases of individual stereocilia to one another. They are not present in mature stereocilia.","definition_xrefs":["PMID:17567809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereocilia coupling link","termid":"GO:0002139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilia ankle link","termid":"GO:0002141"}


id: GO:2000614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thyroid-stimulating hormone secretion.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"is_a","term_name":"regulation of thyroid-stimulating hormone secretion","termid":"GO:2000612"},{"relation_name":"positively_regulates","term_name":"thyroid-stimulating hormone secretion","termid":"GO:0070460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of thyroid-stimulating hormone secretion","synonyms":[{"name":"positive regulation of TSH secretion","type":"exact"},{"name":"positive regulation of thyroid stimulating hormone secretion","type":"exact"}],"termid":"GO:2000614"}


id: PBO:0110362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC9 pseudogene 1","termid":"PBO:0110362"}


id: PBO:0050957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon kappa","termid":"PBO:0050957"}


id: GO:0004656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["EC:1.14.11.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"procollagen-proline dioxygenase activity","termid":"GO:0019798"},{"relation_name":"is_a","term_name":"peptidyl-proline 4-dioxygenase activity","termid":"GO:0031545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"procollagen-proline 4-dioxygenase activity","secondary_identifiers":["RHEA:18945","Reactome:R-HSA-1650808","MetaCyc:1.14.11.2-RXN","KEGG_REACTION:R03219"],"synonyms":[{"name":"collagen proline hydroxylase activity","type":"related"},{"name":"hydroxylase, collagen proline activity","type":"related"},{"name":"peptidyl proline hydroxylase activity","type":"broad"},{"name":"procollagen-L-proline,2-oxoglutarate:oxygen oxidoreductase (4-hydroxylating) activity","type":"related"},{"name":"procollagen-proline,2-oxoglutarate-4-dioxygenase activity","type":"exact"},{"name":"proline hydroxylase activity","type":"broad"},{"name":"proline protocollagen hydroxylase activity","type":"related"},{"name":"proline, 2-oxoglutarate dioxygenase activity","type":"broad"},{"name":"proline,2-oxoglutarate 4-dioxygenase activity","type":"broad"},{"name":"prolyl 4-hydroxylase activity","type":"broad"},{"name":"prolyl hydroxylase activity","type":"broad"},{"name":"prolyl-glycyl-peptide, 2-oxoglutarate:oxygen oxidoreductase, 4-hydroxylating activity","type":"broad"},{"name":"prolylprotocollagen dioxygenase activity","type":"related"},{"name":"prolylprotocollagen hydroxylase activity","type":"related"},{"name":"protocollagen hydroxylase activity","type":"broad"},{"name":"protocollagen proline 4-hydroxylase activity","type":"related"},{"name":"protocollagen proline dioxygenase activity","type":"related"},{"name":"protocollagen proline hydroxylase activity","type":"related"},{"name":"protocollagen prolyl hydroxylase activity","type":"related"}],"termid":"GO:0004656"}


id: GO:0036500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the endoplasmic reticulum membrane stress sensor ATF6 (activating transcription factor 6). Begins with activation of ATF6 in response to endoplasmic reticulum (ER) stress, and ends with regulation of a downstream cellular process, e.g. transcription. Under conditions of endoplasmic reticulum stress, ATF6 translocates to the Golgi where it is processed by proteases to release a cytoplasmic domain (ATF6f), which operates as a transcriptional activator of many genes required to restore folding capacity.","definition_xrefs":["PMID:22013210","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ATF6-mediated unfolded protein response","secondary_identifiers":["Reactome:R-HSA-381033"],"synonyms":[{"name":"ATF6 branch of UPR","type":"exact"},{"name":"ATF6 signal transduction pathway","type":"broad"},{"name":"ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"ATF6-alpha UPR branch","type":"narrow"},{"name":"ATF6-beta UPR branch","type":"narrow"},{"name":"UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"}],"termid":"GO:0036500"}


id: GO:0017189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal alanine of proteins; catalyzed by peptide alpha-N-acetyltransferase or other enzymes of this class, such as ribosomal-protein-alanine N-acetyltransferase.","definition_xrefs":["RESID:AA0041"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-alanine acetylation (obsolete GO:0017189)","termid":"GO:0017189"}


id: FYPO:0007637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which chromatin moves within the nucleus to a lower extent than normal.","definition_xrefs":["PMID:33434270","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"decreased chromatin mobility","synonyms":[{"name":"decreased chromatin mobility during mitotic cell cycle","type":"related"},{"name":"decreased chromatin mobility during vegetative growth","type":"exact"},{"name":"decreased chromatin motility","type":"exact"},{"name":"decreased chromatin movement","type":"exact"},{"name":"reduced chromatin mobility","type":"exact"}],"termid":"FYPO:0007637"}


id: PBO:0086384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative benzil reductase;(GFP)-fusion protein localizes to the cytoplasm and is induced by the DNA-damaging agent MMS; sequence similarity with short-chain dehydrogenase/reductases; null mutant has increased spontaneous Rad52p foci","termid":"PBO:0086384"}


id: PBO:0047675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP3 regulating long intergenic non-coding RNA","termid":"PBO:0047675"}


id: PBO:0052160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 8","termid":"PBO:0052160"}


id: PBO:0075258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 11","termid":"PBO:0075258"}


id: MOD:00924
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and an L-threonine residue by an isopeptide bond to form N6-(L-threonyl)-L-lysine.","definition_xrefs":["PubMed:18063774","RESID:AA0440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopeptide crosslinked residues","termid":"MOD:00688"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-(L-threonyl)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(2S,3R)-2-amino-3-hydroxybutanoyl]amino)hexanoic acid","type":"exact"},{"name":"N6-(L-threonyl)-L-lysine","type":"exact"},{"name":"N6-threonyl-lysine","type":"exact"}],"termid":"MOD:00924"}


id: MOD:00331
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues and a three-iron four-sulfur cluster to tetrakis-L-cysteinyl triiron tetrasulfide.","definition_xrefs":["PubMed:2511202","PubMed:11941493","PubMed:11592901","RESID:AA0326","PubMed:6094558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tetrakis-L-cysteinyl triiron tetrasulfide","synonyms":[{"name":"bis[bis-L-cysteinyl iron disulfido]iron","type":"exact"},{"name":"di-mu-1:2kappaS-sulfido di-mu-2:3kappaS-sulfido iron bis(bis-S-cysteinyliron)","type":"exact"},{"name":"tetra-mu-sulfido tetrakis-S-L-cysteinyl triiron","type":"exact"},{"name":"tetrakis-L-cysteinyl linear [3Fe-4S] cluster","type":"exact"},{"name":"tetrakis-L-cysteinyl triiron tetrasulfide","type":"exact"},{"name":"tetrakis-L-cysteinyl triiron tetrasulfide D2 cluster","type":"exact"}],"termid":"MOD:00331"}


id: PBO:0004608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 RBBP6 family involved in mRNA cleavage (predicted)","termid":"PBO:0004608"}


id: GO:0015740
data:
  {"annotated_genes":["SJAG_02011","SJAG_02140","SJAG_00671","SJAG_01406","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070778"},{"annotations":[101994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098714"},{"annotations":[67795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071423"},{"annotations":[63987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015743"},{"annotations":[88734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990555"},{"annotations":[101996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098720"}]},"cv_name":"biological_process","definition":"The directed movement of a C4-dicarboxylate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A C4-dicarboxylate is the anion of a dicarboxylic acid that contains four carbon atoms.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00671":null,"SJAG_01406":null,"SJAG_02011":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"C4-dicarboxylate transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0015740","terms_by_termid":{"GO:0015743":null,"GO:0070778":null,"GO:0071423":null,"GO:0098714":null,"GO:0098720":null,"GO:1990555":null}}


id: GO:1903217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein processing involved in protein targeting to mitochondrion.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","GO_REF:0000058","PMID:21370995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein processing","termid":"GO:0010955"},{"relation_name":"is_a","term_name":"regulation of protein processing involved in protein targeting to mitochondrion","termid":"GO:1903216"},{"relation_name":"negatively_regulates","term_name":"protein processing involved in protein targeting to mitochondrion","termid":"GO:0006627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"negative regulation of protein processing involved in protein targeting to mitochondrion","synonyms":[{"name":"down regulation of mitochondrial protein processing during import","type":"related"},{"name":"down regulation of protein processing involved in protein targeting to mitochondrion","type":"exact"},{"name":"down-regulation of mitochondrial protein processing during import","type":"related"},{"name":"down-regulation of protein processing involved in protein targeting to mitochondrion","type":"exact"},{"name":"downregulation of mitochondrial protein processing during import","type":"related"},{"name":"downregulation of protein processing involved in protein targeting to mitochondrion","type":"exact"},{"name":"inhibition of mitochondrial protein processing during import","type":"related"},{"name":"inhibition of protein processing involved in protein targeting to mitochondrion","type":"narrow"},{"name":"negative regulation of mitochondrial protein processing during import","type":"related"}],"termid":"GO:1903217"}


id: GO:0007367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of the 14 parasegments of the embryo into anterior and posterior compartments; exemplified by the actions of the segment polarity gene products.","definition_xrefs":["ISBN:0879694238","ISBN:0632030488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periodic partitioning","termid":"GO:0007365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"segment polarity determination","termid":"GO:0007367"}


id: PBO:0043412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cap methyltransferase 1","termid":"PBO:0043412"}


id: MONDO:0015633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Bazex syndrome (obsolete MONDO:0015633)","termid":"MONDO:0015633","xrefs":{"Monarch":{"xref_id":"0015633"}}}


id: GO:0016106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sesquiterpenoid compounds, terpenoids with three isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sesquiterpenoid biosynthetic process","synonyms":[{"name":"sesquiterpenoid anabolism","type":"exact"},{"name":"sesquiterpenoid biosynthesis","type":"exact"},{"name":"sesquiterpenoid formation","type":"exact"},{"name":"sesquiterpenoid synthesis","type":"exact"}],"termid":"GO:0016106"}


id: PBO:0065212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripherin 2","termid":"PBO:0065212"}


id: MONDO:0016302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dextro-looped transposition of the great arteries","termid":"MONDO:0019443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"isolated congenitally uncorrected transposition of the great arteries","secondary_identifiers":["GARD:20502","Orphanet:216718","UMLS:C5679810","MEDGEN:1842921"],"synonyms":[{"name":"isolated congenitally uncorrected transposition of the great vessels","type":"exact"}],"termid":"MONDO:0016302","xrefs":{"Monarch":{"xref_id":"0016302"}}}


id: _global:has_component_activity
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"has_component_process","termid":"_global:has_component_process"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_component_activity","secondary_identifiers":["RO:0002017"],"termid":"_global:has_component_activity"}


id: PBO:0048590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain 4 pseudogene","termid":"PBO:0048590"}


id: GO:1903517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of single strand break repair.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:BHF","PMID:17395247","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"negatively_regulates","term_name":"single strand break repair","termid":"GO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"negative regulation of single strand break repair","synonyms":[{"name":"down regulation of single strand break repair","type":"exact"},{"name":"down-regulation of single strand break repair","type":"exact"},{"name":"downregulation of single strand break repair","type":"exact"},{"name":"inhibition of single strand break repair","type":"narrow"}],"termid":"GO:1903517"}


id: GO:0009687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"apocarotenoid metabolic process","termid":"GO:0043288"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"abscisic acid metabolic process","synonyms":[{"name":"abscisic acid metabolism","type":"exact"}],"termid":"GO:0009687"}


id: PBO:0063042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase domain containing paladin 1","termid":"PBO:0063042"}


id: MOD:00109
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to L-valine amide.","definition_xrefs":["PubMed:2578459","PubMed:5465996","RESID:AA0100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-valine amide","synonyms":[{"name":"(2S)-2-amino-3-methylbutanamide","type":"exact"},{"name":"L-valine amide","type":"exact"},{"name":"MOD_RES Valine amide","type":"exact"},{"name":"ValN","type":"exact"},{"name":"valinamide","type":"exact"}],"termid":"MOD:00109"}


id: PBO:0061710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 5","termid":"PBO:0061710"}


id: MONDO:0015785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Prader-Willi syndrome","termid":"MONDO:0008300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"Prader-Willi syndrome due to translocation","secondary_identifiers":["UMLS:C5680509","GARD:17074","Orphanet:177907","MEDGEN:1826085"],"termid":"MONDO:0015785","xrefs":{"Monarch":{"xref_id":"0015785"}}}


id: PR:O94560
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- far8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C1773.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.01","synonyms":[{"name":"Spom972h-far8","type":"exact"}],"termid":"PR:O94560"}


id: MONDO:0859224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability and myopathy syndrome","secondary_identifiers":["OMIM:619719","MEDGEN:1808193","UMLS:C5676904"],"termid":"MONDO:0859224","xrefs":{"Monarch":{"xref_id":"0859224"}}}


id: PBO:0082336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding protein required for mismatch repair; required for both mitosis and meiosis; functions as a heterodimer with Mlh1p; binds double- and single-stranded DNA via its N-terminal domain; required for silencing at the silent mating-type loci and telomeres; similar to E. coli MutL","termid":"PBO:0082336"}


id: MONDO:0007222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brachydactyly characterized by short and broad terminal phalanges of the thumbs and big toes that has material basis in mutation in the HOXD13 gene on chromosome 2q31.1.","definition_xrefs":["DOID:0110971","PMID:12649808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type D","secondary_identifiers":["icd11.foundation:642882691","MESH:C562420","OMIM:113200","UMLS:C0220664","Orphanet:93385","MEDGEN:66313"],"synonyms":[{"name":"BDD","type":"exact"},{"name":"brachydactyly, type D","type":"related"},{"name":"stub thumb","type":"related"}],"termid":"MONDO:0007222","xrefs":{"Monarch":{"xref_id":"0007222"}}}


id: MONDO:0957958
data:
  {"annotated_genes":["SJAG_05289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86372],"is_not":false,"summary":null,"term":"MONDO:0957958"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 72b, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620606","UMLS:C5882720","MEDGEN:1844131"],"termid":"MONDO:0957958","terms_by_termid":{"MONDO:0957958":null},"xrefs":{"Monarch":{"xref_id":"0957958"}}}


id: GO:1902458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of stomatal opening.","definition_xrefs":["GOC:TermGenie","PMID:23766366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of stomatal opening","termid":"GO:1902456"},{"relation_name":"positively_regulates","term_name":"stomatal opening","termid":"GO:1990069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stomatal opening","synonyms":[{"name":"activation of stomatal opening","type":"narrow"},{"name":"up regulation of stomatal opening","type":"exact"},{"name":"up-regulation of stomatal opening","type":"exact"},{"name":"upregulation of stomatal opening","type":"exact"}],"termid":"GO:1902458"}


id: MONDO:0016152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of calpain (obsolete MONDO:0016152)","secondary_identifiers":["Orphanet:207104"],"termid":"MONDO:0016152","xrefs":{"Monarch":{"xref_id":"0016152"}}}


id: PBO:0117155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF497 antisense RNA 2","termid":"PBO:0117155"}


id: PBO:0086563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR122C is not an essential gene","termid":"PBO:0086563"}


id: MONDO:0005408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetic cataracts are thought to be caused by hyperglycemia associated with disturbed glucose metabolism","definition_xrefs":["EFO:0004596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"diabetes mellitus type 2 associated cataract","secondary_identifiers":["UMLS:C1720171","MEDGEN:739998"],"termid":"MONDO:0005408","xrefs":{"Monarch":{"xref_id":"0005408"}}}


id: MOD:01949
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links a phenylalanine and two tyrosine residues to form coelenterazine.","definition_xrefs":["RESID:AA0595","PubMed:10830969","PubMed:11572972","PubMed:19833098","ChEBI:2311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coelenterazine","synonyms":[{"name":"8-benzyl-2-(4-hydroxybenzyl)-6-(4-hydroxyphenyl)imidazo[1,2-a]pyrazin-3(7H)-one","type":"exact"},{"name":"Oplophorus luciferin","type":"exact"},{"name":"coelenterazine","type":"exact"}],"termid":"MOD:01949"}


id: GO:1904018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vasculature development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21472453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"positively_regulates","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vasculature development","synonyms":[{"name":"activation of vascular system development","type":"related"},{"name":"activation of vasculature development","type":"narrow"},{"name":"positive regulation of vascular system development","type":"related"},{"name":"up regulation of vascular system development","type":"related"},{"name":"up regulation of vasculature development","type":"exact"},{"name":"up-regulation of vascular system development","type":"related"},{"name":"up-regulation of vasculature development","type":"exact"},{"name":"upregulation of vascular system development","type":"related"},{"name":"upregulation of vasculature development","type":"exact"}],"termid":"GO:1904018"}


id: PBO:0027187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_organization","termid":"PBO:0027187"}


id: PBO:0040857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bridge-like lipid transfer protein family member 3A","termid":"PBO:0040857"}


id: PBO:0059438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A7","termid":"PBO:0059438"}


id: MONDO:0020744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an electrocardiographic finding of intermittent failure of atrial electrical impulse conduction to the ventricles, characterized by a progressively lengthening PR interval prior to the block of an atrial impulse. (CDISC)","definition_xrefs":["NCIT:C62017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"second-degree atrioventricular block","termid":"MONDO:0000467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Mobitz type I atrioventricular block","secondary_identifiers":["UMLS:C0264907","MEDGEN:82687"],"synonyms":[{"name":"AV block second degree Mobitz type I","type":"exact"},{"name":"AV block second degree Möbitz type I","type":"exact"},{"name":"Mobitz I","type":"exact"},{"name":"Mobitz type I","type":"exact"},{"name":"Mobitz type I second degree AV block","type":"exact"},{"name":"Möbitz I","type":"exact"},{"name":"Möbitz type I second degree AV block","type":"exact"},{"name":"Wenckebach block","type":"exact"},{"name":"second degree atrioventricular block Mobitz type I","type":"exact"},{"name":"second degree atrioventricular block Möbitz type I","type":"exact"},{"name":"type 1 2nd degree AV block","type":"exact"},{"name":"type 1 second degree AV block","type":"exact"},{"name":"type 1 second degree atrioventricular block","type":"exact"}],"termid":"MONDO:0020744","xrefs":{"Monarch":{"xref_id":"0020744"}}}


id: FYPO:0001858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of fatty acid synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal fatty acid synthase activity","termid":"FYPO:0000720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"increased fatty acid synthase activity","synonyms":[{"name":"increased FAS activity","type":"exact"}],"termid":"FYPO:0001858"}


id: PBO:0073086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHA pseudogene 2","termid":"PBO:0073086"}


id: MONDO:0018236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis with limb and face anomalies as a major feature (obsolete MONDO:0018236)","secondary_identifiers":["Orphanet:364571"],"termid":"MONDO:0018236","xrefs":{"Monarch":{"xref_id":"0018236"}}}


id: FYPO:0001546
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to zinc ion is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to zinc ion","synonyms":[{"name":"decreased RNA accumulation during cellular response to zinc ion","type":"related"},{"name":"decreased RNA level during cellular response to zinc","type":"exact"},{"name":"decreased RNA level during cellular response to zinc ion during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to zinc ion during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to zinc ion","type":"narrow"},{"name":"decreased transcript level during cellular response to zinc ion","type":"exact"},{"name":"reduced RNA level during cellular response to zinc ion","type":"exact"}],"termid":"FYPO:0001546"}


id: PBO:0028063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transposon_gene_mRNA_level","termid":"PBO:0028063"}


id: PBO:0071780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 8","termid":"PBO:0071780"}


id: MONDO:0005738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic infection caused by tapeworm larvae of Echinococcus. It affects livestock and humans. It is characterized by the formation of hydatid cysts mainly in the liver, lungs, spleen, and kidneys. Rupture of the cysts may lead to shock.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cestode infectious disease","termid":"MONDO:0042488"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"echinococcosis","secondary_identifiers":["ICD10CM:B67","ICD9:122","UMLS:C0013502","SCTID:74942003","EFO:0007245","icd11.foundation:1456802165","MEDGEN:4438","MESH:D004443","DOID:1496","ICD9:122.9","NCIT:C84682"],"synonyms":[{"name":"Echinococcus caused disease or disorder","type":"exact"},{"name":"Echinococcus disease or disorder","type":"exact"},{"name":"Echinococcus infectious disease","type":"exact"},{"name":"echinococcal disease","type":"narrow"},{"name":"echinococciasis","type":"related"},{"name":"echinococcosis","type":"exact"},{"name":"echinococcosis of liver","type":"exact"},{"name":"echinococcosis, unspecified, of liver","type":"narrow"},{"name":"echinococcus disease","type":"related"},{"name":"hepatic echinococcosis","type":"narrow"},{"name":"hydatid disease","type":"narrow"},{"name":"hydatidosis","type":"narrow"},{"name":"liver echinococcus","type":"exact"},{"name":"pulmonary echinococcosis","type":"narrow"}],"termid":"MONDO:0005738","xrefs":{"Monarch":{"xref_id":"0005738"}}}


id: PATO:0000134
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000134 absolute_angle (obsolete PATO:0000134)","termid":"PATO:0000134"}


id: GO:0030391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fructosamine, a fructose molecule containing an amino group in place of a hydroxyl group.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructosamine metabolic process","termid":"GO:0030389"},{"relation_name":"is_a","term_name":"amino sugar biosynthetic process","termid":"GO:0046349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructosamine biosynthetic process","synonyms":[{"name":"fructosamine anabolism","type":"exact"},{"name":"fructosamine biosynthesis","type":"exact"},{"name":"fructosamine formation","type":"exact"},{"name":"fructosamine synthesis","type":"exact"}],"termid":"GO:0030391"}


id: GO:0160018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of platelet rolling.","definition_xrefs":["GO_REF:0000058","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heterotypic cell-cell adhesion","termid":"GO:0034116"},{"relation_name":"is_a","term_name":"regulation of platelet rolling","termid":"GO:0160017"},{"relation_name":"positively_regulates","term_name":"platelet rolling","termid":"GO:0160015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of platelet rolling","termid":"GO:0160018"}


id: PBO:0050688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 15","termid":"PBO:0050688"}


id: GO:0019177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydroneopterin triphosphate = dihydroneopterin phosphate + diphosphate.","definition_xrefs":["RHEA:25302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dihydroneopterin triphosphate pyrophosphohydrolase activity","secondary_identifiers":["MetaCyc:H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN","EC:3.6.1.67"],"termid":"GO:0019177"}


id: PBO:0065892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB39A, member RAS oncogene family","termid":"PBO:0065892"}


id: PBO:0002561
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.96","termid":"PBO:0002561"}


id: MONDO:0017544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndactyly type 1","termid":"MONDO:0008512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zygodactyly type 3","secondary_identifiers":["Orphanet:295191","UMLS:C5679983","GARD:21215","icd11.foundation:1831534806","MEDGEN:1843229"],"synonyms":[{"name":"SD1, Montagu type","type":"exact"},{"name":"SD1c","type":"exact"},{"name":"Zygodactyly, Montagu type","type":"exact"},{"name":"syndactyly type 1, Montagu type","type":"exact"},{"name":"syndactyly type 1c","type":"exact"}],"termid":"MONDO:0017544","xrefs":{"Monarch":{"xref_id":"0017544"}}}


id: PBO:0061771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorant binding protein 2A","termid":"PBO:0061771"}


id: GO:1900982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phenazine biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of phenazine biosynthetic process","termid":"GO:1900980"},{"relation_name":"positively_regulates","term_name":"phenazine biosynthetic process","termid":"GO:0002047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phenazine biosynthetic process","synonyms":[{"name":"activation of acridizine biosynthesis","type":"related"},{"name":"activation of acridizine biosynthetic process","type":"related"},{"name":"activation of azophenylene biosynthesis","type":"related"},{"name":"activation of azophenylene biosynthetic process","type":"related"},{"name":"activation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"activation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"activation of dibenzopyrazine biosynthesis","type":"related"},{"name":"activation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"activation of phenazine biosynthetic process","type":"narrow"},{"name":"positive regulation of acridizine biosynthesis","type":"related"},{"name":"positive regulation of acridizine biosynthetic process","type":"related"},{"name":"positive regulation of azophenylene biosynthesis","type":"related"},{"name":"positive regulation of azophenylene biosynthetic process","type":"related"},{"name":"positive regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"positive regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"positive regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"positive regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up regulation of acridizine biosynthesis","type":"related"},{"name":"up regulation of acridizine biosynthetic process","type":"related"},{"name":"up regulation of azophenylene biosynthesis","type":"related"},{"name":"up regulation of azophenylene biosynthetic process","type":"related"},{"name":"up regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"up regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"up regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"up regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up regulation of phenazine biosynthetic process","type":"exact"},{"name":"up-regulation of acridizine biosynthesis","type":"related"},{"name":"up-regulation of acridizine biosynthetic process","type":"related"},{"name":"up-regulation of azophenylene biosynthesis","type":"related"},{"name":"up-regulation of azophenylene biosynthetic process","type":"related"},{"name":"up-regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"up-regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"up-regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"up-regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up-regulation of phenazine biosynthetic process","type":"exact"},{"name":"upregulation of acridizine biosynthesis","type":"related"},{"name":"upregulation of acridizine biosynthetic process","type":"related"},{"name":"upregulation of azophenylene biosynthesis","type":"related"},{"name":"upregulation of azophenylene biosynthetic process","type":"related"},{"name":"upregulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"upregulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"upregulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"upregulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"upregulation of phenazine biosynthetic process","type":"exact"}],"termid":"GO:1900982"}


id: MONDO:0006690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blood clot formation in any part of the carotid arteries. This may produce carotid stenosis or occlusion of the vessel, leading to transient ischemic attack; cerebral infarction; or amaurosis fugax.","definition_xrefs":["MESH:D002341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial thrombosis","termid":"MONDO:0002907"},{"relation_name":"is_a","term_name":"carotid artery disorder","termid":"MONDO:0005269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carotid artery thrombosis","secondary_identifiers":["EFO:1000853","ICD9:433.10","MEDGEN:40119","DOID:3410","MedDRA:10007688","SCTID:86003009","UMLS:C0007274"],"synonyms":[{"name":"carotid artery thrombosis","type":"exact"}],"termid":"MONDO:0006690","xrefs":{"Monarch":{"xref_id":"0006690"}}}


id: PBO:0049090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 146","termid":"PBO:0049090"}


id: PBO:0041912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene like 2","termid":"PBO:0041912"}


id: MONDO:0009434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"MHC class I deficiency","termid":"MONDO:0011476"},{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypoproteinemia, hypercatabolic","secondary_identifiers":["UMLS:C1855796","GARD:15185","MEDGEN:343422","DOID:0111981","MESH:C565476","OMIM:241600"],"synonyms":[{"name":"B2M deficiency","type":"related"},{"name":"Beta-2-microglobulin deficiency","type":"related"},{"name":"IMD43","type":"related"},{"name":"hypoproteinemia, hypercatabolic","type":"exact"},{"name":"immunodeficiency 43","type":"related"}],"termid":"MONDO:0009434","xrefs":{"Monarch":{"xref_id":"0009434"}}}


id: PBO:0067398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 504, pseudogene","termid":"PBO:0067398"}


id: GO:0033544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway by which fatty acids having cis-double bonds on even-numbered carbons are degraded. In this pathway, the intermediate 2,4-dienoyl-CoA is converted to cis-2-enoyl-CoA through one more cycle of the core beta-oxidation pathway. Cis-2-enoyl-CoA cannot be completely degraded via the core beta-oxidation pathway because hydratation of cis-2-enoyl-CoA yields D-3-hydroxyacyl-CoA, which is not a substrate for 3-hydroxylacyl-CoA dehydrogenase. Cis-2-enoyl-CoA must enter the so-called epimerase pathway, which involves converting D-3-hydroxyacyl-CoA to L-3-hydroxyacyl-CoA by 3-hydroxylacyl-CoA epimerase or by two stereo-specific enoyl-CoA hydratases. L-3-hydroxyacyl-CoA then returns to the core beta-oxidation pathway. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["GOC:mah","MetaCyc:PWY-5138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation, unsaturated, even number","termid":"GO:0033542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid beta-oxidation, unsaturated, even number, epimerase pathway","termid":"GO:0033544"}


id: PBO:0057466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 584","termid":"PBO:0057466"}


id: PBO:0077623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 15B","termid":"PBO:0077623"}


id: PBO:0069636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 913, pseudogene","termid":"PBO:0069636"}


id: PBO:0084283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein required for efficient mating; may participate in or regulate the low affinity Ca2+ influx system, which affects intracellular signaling and cell-cell fusion during mating","termid":"PBO:0084283"}


id: MONDO:0100036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An epilepsy syndrome that has an onset during variable ages and stages of life.","gene_count":0,"genotype_count":0,"name":"obsolete variable-age onset epilepsy syndrome (obsolete MONDO:0100036)","synonyms":[{"name":"variable age onset epilepsy","type":"broad"}],"termid":"MONDO:0100036","xrefs":{"Monarch":{"xref_id":"0100036"}}}


id: MONDO:0020745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0000426"],"is_obsolete":false,"name":"ventricular arrhythmias due to cardiac ryanodine receptor calcium release deficiency syndrome","secondary_identifiers":["MEDGEN:1781114","OMIM:115000","UMLS:C5542154"],"synonyms":[{"name":"VACRDS","type":"exact"},{"name":"autosomal dominant cardiac arrhythmia (Kuhn)","type":"exact"},{"name":"cardiac arrhythmia","type":"related"},{"name":"extrasystoles","type":"related"},{"name":"ventricular arrhythmias due to cardiac ryanodine receptor calcium release deficiency syndrome","type":"exact"}],"termid":"MONDO:0020745","xrefs":{"Monarch":{"xref_id":"0020745"}}}


id: PATO:0001404
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of bearer's number of nuclei.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleate quality","termid":"PATO:0001404"}


id: FYPO:0002739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a meiotic cell cycle process normally. A meiotic cell cycle process is any of the processes that form part of the meiotic cell cycle, and thereby ensures successive accurate and complete genome replication and meiotic chromosome segregation.","definition_xrefs":["PomBase:mah","GO:0022402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}


id: PBO:0080060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 30","termid":"PBO:0080060"}


id: GO:1903787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glutathione biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of glutathione biosynthetic process","termid":"GO:1903786"},{"relation_name":"negatively_regulates","term_name":"glutathione biosynthetic process","termid":"GO:0006750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutathione biosynthetic process","synonyms":[{"name":"down regulation of glutathione anabolism","type":"exact"},{"name":"down regulation of glutathione biosynthesis","type":"exact"},{"name":"down regulation of glutathione biosynthetic process","type":"exact"},{"name":"down regulation of glutathione formation","type":"exact"},{"name":"down regulation of glutathione synthesis","type":"exact"},{"name":"down-regulation of glutathione anabolism","type":"exact"},{"name":"down-regulation of glutathione biosynthesis","type":"exact"},{"name":"down-regulation of glutathione biosynthetic process","type":"exact"},{"name":"down-regulation of glutathione formation","type":"exact"},{"name":"down-regulation of glutathione synthesis","type":"exact"},{"name":"downregulation of glutathione anabolism","type":"exact"},{"name":"downregulation of glutathione biosynthesis","type":"exact"},{"name":"downregulation of glutathione biosynthetic process","type":"exact"},{"name":"downregulation of glutathione formation","type":"exact"},{"name":"downregulation of glutathione synthesis","type":"exact"},{"name":"inhibition of glutathione anabolism","type":"narrow"},{"name":"inhibition of glutathione biosynthesis","type":"narrow"},{"name":"inhibition of glutathione biosynthetic process","type":"narrow"},{"name":"inhibition of glutathione formation","type":"narrow"},{"name":"inhibition of glutathione synthesis","type":"narrow"},{"name":"negative regulation of glutathione anabolism","type":"exact"},{"name":"negative regulation of glutathione biosynthesis","type":"exact"},{"name":"negative regulation of glutathione formation","type":"exact"},{"name":"negative regulation of glutathione synthesis","type":"exact"}],"termid":"GO:1903787"}


id: PBO:0071953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 3","termid":"PBO:0071953"}


id: PBO:0062320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 2","termid":"PBO:0062320"}


id: MONDO:0007897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete leukemia, chronic lymphocytic (obsolete MONDO:0007897)","termid":"MONDO:0007897","xrefs":{"Monarch":{"xref_id":"0007897"}}}


id: GO:0048455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of giving rise to the stamen. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ formation","termid":"GO:0048449"},{"relation_name":"part_of","term_name":"stamen morphogenesis","termid":"GO:0048448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stamen formation","secondary_identifiers":["GO:0048427"],"termid":"GO:0048455"}


id: GO:0033058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of a cell or organism from one location to another along an axis.","definition_xrefs":["GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"directional locomotion","termid":"GO:0033058"}


id: FYPO:0002249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of fructose binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal monosaccharide binding","termid":"FYPO:0002245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased fructose binding","synonyms":[{"name":"reduced fructose binding","type":"exact"}],"termid":"FYPO:0002249"}


id: RO:0002404
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of upstream of","direct_ancestors":[{"relation_name":"is_a","term_name":"preceded_by","termid":"BFO:0000062"},{"relation_name":"is_a","term_name":"causally_downstream_of_or_within","termid":"RO:0002427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_downstream_of","termid":"RO:0002404"}


id: PBO:0066835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 134","termid":"PBO:0066835"}


id: PBO:0077474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 196","termid":"PBO:0077474"}


id: PBO:0077599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11B","termid":"PBO:0077599"}


id: PBO:0059393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S26","termid":"PBO:0059393"}


id: PBO:0090796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER flavin-containing N,N-dimethylaniline monooxygenase activity Fmo1","termid":"PBO:0090796"}


id: PBO:0070650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 21","termid":"PBO:0070650"}


id: PBO:0086381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATP-dependent RNA helicase; nucleolar protein required for synthesis of 60S ribosomal subunits at a late step in the pathway; sediments with 66S pre-ribosomes in sucrose gradients","termid":"PBO:0086381"}


id: GO:0016756
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  {"annotated_genes":["SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71213],"is_not":false,"summary":null,"term":"GO:0016756"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glutathione + Glu(-Cys)(n)-Gly = Gly + Glu(-Cys)(n+1)-Gly.","definition_xrefs":["EC:2.3.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutathione gamma-glutamylcysteinyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:17917","MetaCyc:2.3.2.15-RXN","GO:0042143"],"synonyms":[{"name":"phytochelatin synthase activity","type":"narrow"}],"termid":"GO:0016756","terms_by_termid":{"GO:0016756":null}}


id: PBO:0031813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_autophagy","termid":"PBO:0031813"}


id: PBO:0011061
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"approved_timestamp","termid":"PBO:0011061"}


id: PBO:0069559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 831, pseudogene","termid":"PBO:0069559"}


id: GO:0090426
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  {"annotated_genes":["SJAG_02864","SJAG_04621","SJAG_04498","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98358,108500,98616,89651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"}]},"cv_name":"biological_process","definition":"A process of actin filament bundle distribution that results in the compaction of actin filaments.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle distribution","termid":"GO:0070650"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_04498":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"actin filament bundle convergence","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090426","terms_by_termid":{"GO:0071520":null}}


id: PBO:0043104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate synthase 1","termid":"PBO:0043104"}


id: GO:0019066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The translocation of an entire virus particle across the host cell plasma membrane.","definition_xrefs":["ISBN:0781702534"],"gene_count":0,"genotype_count":0,"name":"obsolete translocation of virus into host cell (obsolete GO:0019066)","synonyms":[{"name":"translocation of virus into host cell","type":"exact"},{"name":"viral translocation","type":"exact"}],"termid":"GO:0019066"}


id: PBO:0086643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the ER","termid":"PBO:0086643"}


id: GO:0014806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in smooth muscle, in which there is an increase in cell number by cell division, often leading to an increase in the size of an organ.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle adaptation","termid":"GO:0014805"},{"relation_name":"is_a","term_name":"muscle hyperplasia","termid":"GO:0014900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle hyperplasia","termid":"GO:0014806"}


id: PBO:0030127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_molybdenum_level","termid":"PBO:0030127"}


id: PBO:0073759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 2 member 13","termid":"PBO:0073759"}


id: GO:0047687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-ascorbate + H2O + O2 = L-threonate + 2 H+ + oxalate.","definition_xrefs":["EC:1.13.11.13"],"gene_count":0,"genotype_count":0,"name":"obsolete ascorbate 2,3-dioxygenase activity (obsolete GO:0047687)","synonyms":[{"name":"AAoxygenase activity","type":"exact"},{"name":"ascorbate 2,3-dioxygenase activity","type":"exact"},{"name":"ascorbate:oxygen 2,3-oxidoreductase (bond-cleaving)","type":"exact"}],"termid":"GO:0047687"}


id: PR:P39964
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division cycle 5-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01129","PRO:DNx","PANTHER:PTHR10641:SF17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division cycle 5-like protein","termid":"PR:000005216"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cdc5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.12","secondary_identifiers":["UniProtKB:P39964"],"synonyms":[{"name":"Spom972h-CDC5L","type":"exact"},{"name":"cell division control protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P39964"}


id: FYPO:0003104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from mRNA transcripts measured in a cell is greater than normal.","definition_xrefs":["PMID:24095277","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased mRNA-derived small RNA level","synonyms":[{"name":"increased accumulation of mRNA-derived small RNAs","type":"related"},{"name":"increased mRNA-derived small RNA accumulation","type":"related"},{"name":"increased mRNA-derived small RNA level during mitotic cell cycle","type":"related"},{"name":"increased mRNA-derived small RNA level during vegetative growth","type":"exact"},{"name":"increased mRNA-derived small transcript level","type":"exact"},{"name":"increased protein-coding gene-derived small RNA level","type":"related"}],"termid":"FYPO:0003104"}


id: PBO:0035917
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_dNTP_level","termid":"PBO:0035917"}


id: GO:0097659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of an RNA transcript from a nucleic acid template (DNA or RNA).","definition_xrefs":["GOC:txnOH","GOC:pr","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleic acid-templated transcription (obsolete GO:0097659)","termid":"GO:0097659"}


id: PBO:0080685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain, phosphoinositide interacting 2","termid":"PBO:0080685"}


id: GO:0033704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: -3beta-hydroxy-5alpha-pregnane-20-one + NADP+ = 5-alpha-pregnane-3,20-dione + H+ + NADPH.","definition_xrefs":["RHEA:18137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-beta-hydroxy-5-alpha-steroid dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R07138","MetaCyc:1.1.1.278-RXN","EC:1.1.1.278"],"synonyms":[{"name":"3beta-hydroxy-5alpha-steroid:NADP+ 3-oxidoreductase activity","type":"related"}],"termid":"GO:0033704"}


id: MONDO:0000437
data:
  {"annotated_genes":["SJAG_03692","SJAG_05212","SJAG_04641","SJAG_00686","SJAG_00526","SJAG_05332","SJAG_04622","SJAG_00421","SJAG_01286","SJAG_04533","SJAG_00933","SJAG_03923","SJAG_01400","SJAG_02680","SJAG_01168","SJAG_02119","SJAG_02885","SJAG_01317","SJAG_01945","SJAG_03393","SJAG_04418","SJAG_01179","SJAG_00059","SJAG_02196","SJAG_01356","SJAG_00645","SJAG_02084","SJAG_00087","SJAG_03720","SJAG_01438","SJAG_02242","SJAG_02377","SJAG_04233","SJAG_02457","SJAG_04822","SJAG_03862","SJAG_00380","SJAG_00863"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014744"},{"annotations":[85764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014557"},{"annotations":[85739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[87127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011397"},{"annotations":[86640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012784"},{"annotations":[87360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013392"},{"annotations":[87040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014503"},{"annotations":[85500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008943"},{"annotations":[85613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014601"},{"annotations":[86788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044720"},{"annotations":[85355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014104"},{"annotations":[86502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013886"},{"annotations":[87116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[85878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100340"},{"annotations":[87435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958231"},{"annotations":[86328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033482"},{"annotations":[86239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016163"},{"annotations":[86016],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011330"},{"annotations":[85581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011439"},{"annotations":[86094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[87596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[85533,85534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012246"},{"annotations":[85519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012450"},{"annotations":[85978,85979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007574"},{"annotations":[86173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013594"},{"annotations":[86623,86622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"},{"annotations":[87486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014934"},{"annotations":[85758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033115"},{"annotations":[85829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032923"},{"annotations":[86896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030312"},{"annotations":[86659,86658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030318"},{"annotations":[86665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030323"},{"annotations":[85936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011801"},{"annotations":[86947,86946],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018996"},{"annotations":[85951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010547"},{"annotations":[86082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010524"}]},"cv_name":"mondo","definition":"A neurological syndrome characterized by clumsy and uncoordinated movement of the limbs, trunk, and cranial muscles. 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id: PBO:0080453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visinin like 1","termid":"PBO:0080453"}


id: PBO:0045715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 3","termid":"PBO:0045715"}


id: GO:0050661
data:
  {"annotated_genes":["SJAG_04810","SJAG_03115","SJAG_02148","SJAG_03903","SJAG_00636","SJAG_03476","SJAG_00234","SJAG_04032","SJAG_01162","SJAG_02488","SJAG_03828","SJAG_03852","SJAG_01198","SJAG_06622","SJAG_02696","SJAG_00972","SJAG_06621","SJAG_04608","SJAG_00660","SJAG_02135","SJAG_02945","SJAG_02297","SJAG_00027","SJAG_04270","SJAG_04652","SJAG_03152","SJAG_05015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57629,58600,59757,60233,62745,62939,64671,64704,64979,65129,65976,68431,68522,70157,71376,80726,94443,104808,109780,109782,109784,109785,115192],"is_not":false,"summary":null,"term":"GO:0050661"},{"annotations":[58997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070401"},{"annotations":[115175,74727,103385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070402"}]},"cv_name":"molecular_function","definition":"Binding to nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl nucleotide binding","termid":"GO:0030554"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00234":null,"SJAG_00636":null,"SJAG_00660":null,"SJAG_00972":null,"SJAG_01162":null,"SJAG_01198":null,"SJAG_02135":null,"SJAG_02148":null,"SJAG_02297":null,"SJAG_02488":null,"SJAG_02696":null,"SJAG_02945":null,"SJAG_03115":null,"SJAG_03152":null,"SJAG_03476":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04032":null,"SJAG_04270":null,"SJAG_04608":null,"SJAG_04652":null,"SJAG_04810":null,"SJAG_05015":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"NADP binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"NADP or NADPH binding","type":"related"},{"name":"NADP+ or NADPH binding","type":"related"},{"name":"nicotinamide adenine dinucleotide phosphate binding","type":"exact"}],"termid":"GO:0050661","terms_by_termid":{"GO:0050661":null,"GO:0070401":null,"GO:0070402":null}}


id: PBO:0047179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 199, Y-linked, pseudogene","termid":"PBO:0047179"}


id: PBO:0055626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3065","termid":"PBO:0055626"}


id: PR:O94695
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter C83.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.11","synonyms":[{"name":"Spom972h-pet2","type":"exact"}],"termid":"PR:O94695"}


id: PBO:0004084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO","termid":"PBO:0004084"}


id: PBO:0072935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 15","termid":"PBO:0072935"}


id: GO:0007160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix via adhesion molecules.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-matrix adhesion","termid":"GO:0007160"}


id: GO:0140740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginyl-[protein] + NAD+ = ADP-riboxanated L-argininyl-[protein] + H+ + NH4(+) + nicotinamide.","definition_xrefs":["RHEA:69500","PMID:34671164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"},{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016829","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"ADP-riboxanase activity","termid":"GO:0140740"}


id: FYPO:0004970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable and elongated when the cell is subject to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0000002","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"viable elongated vegetative cell during phosphate starvation","synonyms":[{"name":"elongated viable vegetative cell during phosphate starvation","type":"exact"},{"name":"viable elongated cell during phosphate starvation during vegetative growth","type":"exact"},{"name":"viable elongated vegetative cell during cellular response to phosphate starvation","type":"exact"},{"name":"viable elongated vegetative cell during phosphate starvation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004970"}


id: GO:0098650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a peptidyl-proline 4-dioxygenase.","definition_xrefs":["GOC:dos","GOC:kvm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"peptidyl-proline 4-dioxygenase binding","termid":"GO:0098650"}


id: PBO:0046424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A8","termid":"PBO:0046424"}


id: MONDO:0024653
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the bones and structures of the skull.","definition_xrefs":["NCIT:C3375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"skull disorder","termid":"MONDO:0024654"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"skull neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:11457","ICD9:239.2","UMLS:C0037305","MESH:D012888","SCTID:126538005"],"synonyms":[{"name":"neoplasm of skull","type":"exact"},{"name":"neoplasm of the skull","type":"exact"},{"name":"skull neoplasm","type":"exact"},{"name":"skull tumor","type":"exact"},{"name":"skull tumour","type":"exact"},{"name":"tumor of skull","type":"exact"},{"name":"tumor of the skull","type":"exact"},{"name":"tumour of skull","type":"exact"},{"name":"tumour of the skull","type":"exact"}],"termid":"MONDO:0024653","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0024653"}}}


id: FYPO:0007442
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0006378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to endoplasmic reticulum membrane","synonyms":[{"name":"normal protein localization to ER membrane","type":"exact"},{"name":"normal protein localization to endoplasmic reticulum membrane during mitotic cell cycle","type":"related"},{"name":"normal protein localization to endoplasmic reticulum membrane during vegetative growth","type":"exact"}],"termid":"FYPO:0007442"}


id: PBO:0042138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 2","termid":"PBO:0042138"}


id: PBO:0002682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA snoRNP complex subunit Nhp2","termid":"PBO:0002682"}


id: PBO:0031051
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_metabolic_process_during_vegetative_growth","termid":"PBO:0031051"}


id: PR:Q10060
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mso1 gene.","definition_xrefs":["UniProtKB:Q10060","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F5.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.05c","synonyms":[{"name":"Spom972h-mso1","type":"exact"}],"termid":"PR:Q10060"}


id: PBO:0002530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p23 homolog, predicted co-chaperone Wos2","termid":"PBO:0002530"}


id: PBO:0058749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6873","termid":"PBO:0058749"}


id: GO:0018662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenol + NADPH + H+ + O2 = catechol + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"phenol 2-monooxygenase activity","secondary_identifiers":["RHEA:17061","UM-BBD_enzymeID:r0696","MetaCyc:PHENOL-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"phenol hydroxylase activity","type":"related"},{"name":"phenol o-hydroxylase activity","type":"related"},{"name":"phenol,NADPH:oxygen oxidoreductase (2-hydroxylating)","type":"related"}],"termid":"GO:0018662"}


id: PR:O74982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cid2 gene.","definition_xrefs":["UniProtKB:O74982","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine-induced death protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.04","synonyms":[{"name":"Spom972h-cid2","type":"exact"}],"termid":"PR:O74982"}


id: MONDO:0012580
data:
  {"annotated_genes":["SJAG_01159"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014206"}]},"cv_name":"mondo","definition":"Congenital pulmonary alveolar proteinosis is a very rare primary interstitial lung disease due to pulmonary surfactant accumulation within the alveolar macrophages and alveoli, characterized by a variable clinical course ranging from an asymptomatic clinical presentation and spontaneous remission, to symptoms such as dyspnea and cough, or to severe respiratory failure.","definition_xrefs":["Orphanet:264675"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary alveolar proteinosis","termid":"MONDO:0001437"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01159":null},"genotype_count":0,"is_obsolete":false,"name":"hereditary pulmonary alveolar proteinosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:265120","MEDGEN:777976","GARD:4582","SCTID:707442002","NANDO:1200750","MESH:C535832","NANDO:2200200","NANDO:1200746","UMLS:C3711368"],"synonyms":[{"name":"congenital PAP","type":"exact"},{"name":"congenital pulmonary alveolar proteinosis","type":"exact"},{"name":"hereditary pulmonary alveolar proteinosis","type":"exact"},{"name":"inborn error of pulmonary surfactant metabolism","type":"exact"},{"name":"inborn error of surfactant metabolism","type":"exact"},{"name":"pulmonary alveolar proteinosis, congenital","type":"related"},{"name":"sufactant metabolism dysfunction, pulmonary","type":"related"}],"termid":"MONDO:0012580","terms_by_termid":{"MONDO:0014206":null},"xrefs":{"Monarch":{"xref_id":"0012580"}}}


id: GO:0036272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gemcitabine stimulus. Gemcitabine is a 2'-deoxycytidine having geminal fluoro substituents in the 2'-position, and is used as a drug in the treatment of various carcinomas.","definition_xrefs":["GOC:hp","Wikipedia:Gemcitabine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to gemcitabine","synonyms":[{"name":"response to 2',2'-difluorodeoxycytidine","type":"exact"},{"name":"response to 2'-deoxy-2',2'-difluorocytidine","type":"exact"}],"termid":"GO:0036272"}


id: PBO:0003575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap109","termid":"PBO:0003575"}


id: PBO:0067709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 7","termid":"PBO:0067709"}


id: PBO:0049213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit associated protein 1","termid":"PBO:0049213"}


id: PBO:0064812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 2","termid":"PBO:0064812"}


id: GO:0001831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenesis of trophectoderm cells.","definition_xrefs":["ISBN:0124020607","ISBN:0198542771","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"trophectodermal cell differentiation","termid":"GO:0001829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophectodermal cellular morphogenesis","synonyms":[{"name":"trophectoderm cellular morphogenesis","type":"exact"}],"termid":"GO:0001831"}


id: GO:0045575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a basophil resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the basophil has specifically bound via IgE bound to Fc-epsilonRI receptors.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte activation","termid":"GO:0036230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil activation","secondary_identifiers":["Wikipedia:Basophil_activation"],"termid":"GO:0045575"}


id: GO:2001178
data:
  {"annotated_genes":["SJAG_00973","SJAG_03421"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88535,106050],"is_not":false,"summary":null,"term":"GO:2001178"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mediator complex assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of mediator complex assembly","termid":"GO:2001176"},{"relation_name":"positively_regulates","term_name":"mediator complex assembly","termid":"GO:0036034"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00973":null,"SJAG_03421":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"positive regulation of mediator complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2001178","terms_by_termid":{"GO:2001178":null}}


id: MONDO:0100221
data:
  {"annotated_genes":["SJAG_02326","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86194,86195],"is_not":false,"summary":null,"term":"MONDO:0100221"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"IFAP syndrome","termid":"MONDO:0100212"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"IFAP syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16402","MEDGEN:1763502","UMLS:C5436607","OMIM:619016"],"synonyms":[{"name":"IFAP SYNDROME 2","type":"exact"},{"name":"IFAP2","type":"exact"},{"name":"ichthyosis , follicular, with atrichia and photophobia syndrome 2","type":"exact"},{"name":"ichthyosis follicularis, atrichia, and photophobia syndrome 2","type":"exact"}],"termid":"MONDO:0100221","terms_by_termid":{"MONDO:0100221":null},"xrefs":{"Monarch":{"xref_id":"0100221"}}}


id: FYPO:0004011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of degradation of one or more ribosomal proteins is increased.","definition_xrefs":["PomBase:mah","PMID:2839305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein degradation during vegetative growth","termid":"FYPO:0000847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"increased degradation of ribosomal proteins during vegetative growth","synonyms":[{"name":"increased degradation of ribosomal proteins during mitotic cell cycle","type":"related"},{"name":"increased ribosomal protein breakdown during vegetative growth","type":"exact"},{"name":"increased ribosomal protein catabolic process during vegetative growth","type":"exact"},{"name":"increased ribosomal protein catabolism during vegetative growth","type":"exact"},{"name":"increased ribosomal protein degradation cycle during vegetative growth","type":"related"}],"termid":"FYPO:0004011"}


id: FYPO:0001997
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of nucleoside diphosphate kinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nucleoside diphosphate kinase activity","termid":"FYPO:0001997"}


id: GO:0042792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The synthesis of ribosomal RNA (rRNA) from a mitochondrial DNA template.","definition_xrefs":["GOC:jl","PMID:23632312"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial rRNA transcription (obsolete GO:0042792)","synonyms":[{"name":"rRNA transcription from mitochondrial promoter","type":"exact"}],"termid":"GO:0042792"}


id: GO:0052712
data:
  {"annotated_genes":["SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol phosphosphingolipid + H2O = sphingolipid + phosphorylinositol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"inositol phosphosphingolipid phospholipase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052712","terms_by_termid":{"GO:0052714":null}}


id: PBO:0054060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1404","termid":"PBO:0054060"}


id: PBO:0055261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2688","termid":"PBO:0055261"}


id: GO:0071816
data:
  {"annotated_genes":["SJAG_01178","SJAG_01496","SJAG_03865","SJAG_01940","SJAG_01240"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73203,75402,88242,114514,115481],"is_not":false,"summary":null,"term":"GO:0071816"}]},"cv_name":"biological_process","definition":"A process of protein insertion into the endoplasmic reticulum (ER) membrane in which a tail-anchored (TA) transmembrane protein is incorporated into an endoplasmic reticulum (ER) membrane. TA transmembrane protein, also named type II transmembrane proteins, contain a single C- terminal transmembrane region.","definition_xrefs":["PMID:20516149","PMID:20676083","GOC:mah","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into ER membrane","termid":"GO:0045048"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01178":null,"SJAG_01240":null,"SJAG_01496":null,"SJAG_01940":null,"SJAG_03865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"tail-anchored membrane protein insertion into ER membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein insertion of tail-anchored membrane proteins into ER membrane","type":"exact"},{"name":"tail-anchored membrane protein insertion into endoplasmic reticulum membrane","type":"exact"},{"name":"type II transmembrane protein insertion into ER membrane","type":"exact"}],"termid":"GO:0071816","terms_by_termid":{"GO:0071816":null}}


id: GO:0072426
data:
  {"annotated_genes":["SJAG_03048","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94879,102735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of G2/M transition DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA damage checkpoint signaling","termid":"GO:0072423"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to G2 DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"GO:0072426","terms_by_termid":{"GO:0072435":null}}


id: GO:0005318
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphate:hydrogen symporter (obsolete GO:0005318)","synonyms":[{"name":"phosphate:hydrogen symporter","type":"exact"},{"name":"phosphate:proton symporter activity","type":"exact"}],"termid":"GO:0005318"}


id: GO:0090397
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plant cell papilla that is part of a stigma papilla cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant cell papilla","termid":"GO:0090395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stigma papilla","termid":"GO:0090397"}


id: MONDO:0004892
data:
  {"annotated_genes":["SJAG_04553","SJAG_03233"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032941"},{"annotations":[86376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012154"}]},"cv_name":"mondo","definition":"A defect in the focusing of light on the retina as in astigmatism, myopia, or hyperopia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03233":null,"SJAG_04553":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"refractive error","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:39021009","UMLS:C0034951","DOID:9835","MEDGEN:20508","MESH:D012030"],"termid":"MONDO:0004892","terms_by_termid":{"MONDO:0012154":null,"MONDO:0032941":null},"xrefs":{"Monarch":{"xref_id":"0004892"}}}


id: GO:0090235
data:
  {"annotated_genes":["SJAG_01837","SJAG_04280","SJAG_04140","SJAG_03126","SJAG_00082","SJAG_03048","SJAG_01805","SJAG_05290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[105536,112340,116397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[90324,94135,102722,111578,117068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of metaphase plate congression, the alignment of chromosomes at the metaphase plate, a plane halfway between the poles of the spindle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"metaphase chromosome alignment","termid":"GO:0051310"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metaphase plate congression","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chromosome congression","type":"exact"}],"termid":"GO:0090235","terms_by_termid":{"GO:0140429":null,"GO:1902424":null,"GO:1902425":null}}


id: PBO:0081800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 729","termid":"PBO:0081800"}


id: RO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"d derived_by_descent_from a if d is specified by some genetic program that is sequence-inherited-from a genetic program that specifies a.","direct_ancestors":[{"relation_name":"is_a","term_name":"evolutionarily_related_to","termid":"RO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"derived_by_descent_from","termid":"RO:0002156"}


id: MOD:01480
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue into an 5'-fluoro-L-tryptophan.","definition_xrefs":["PubMed:8172898","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-tryptophan","termid":"MOD:01226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-fluoro-L-tryptophan","synonyms":[{"name":"5-fluorotryptophan","type":"exact"}],"termid":"MOD:01480"}


id: FYPO:0003175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleotide-excision repair is decreased during a cellular response to ultraviolet light. Nucleotide-excision repair is a DNA repair process in which a small region of the strand surrounding the damage is removed as an oligonucleotide, and the resulting small gap is filled in by the sequential action of DNA polymerase and DNA ligase.","definition_xrefs":["GO:0006289","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleotide-excision repair during vegetative growth","termid":"FYPO:0003173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"decreased nucleotide-excision repair during cellular response to UV","synonyms":[{"name":"decreased NER during cellular response to UV","type":"exact"},{"name":"decreased excision repair during cellular response to UV","type":"broad"},{"name":"decreased nucleotide-excision repair during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"decreased nucleotide-excision repair during cellular response to UV during vegetative growth","type":"exact"},{"name":"reduced nucleotide-excision repair during cellular response to UV","type":"exact"}],"termid":"FYPO:0003175"}


id: MONDO:0011099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Human HOXA1 syndromes is characterized by deafness, central hypoventilation, congenital ocular paralysis and developmental retardation. Cardiac anomalies and paralysis of the vocal chords may also be present. Six cases have been reported so far. Transmission is thought to be autosomal recessive.","definition_xrefs":["Orphanet:69739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"human HOXA1 syndromes","secondary_identifiers":["DOID:0050682","OMIM:601536","MEDGEN:330410","GARD:8333","UMLS:C1832215","SCTID:720518006"],"synonyms":[{"name":"ABDS","type":"related"},{"name":"ABSD","type":"exact"},{"name":"Athabascan brainstem dysgenesis syndrome","type":"exact"},{"name":"Athabaskan brainstem dysgenesis","type":"related"},{"name":"Athabaskan brainstem dysgenesis syndrome","type":"exact"},{"name":"BSAS","type":"related"},{"name":"Bosley Salih Alorainy syndrome","type":"related"},{"name":"Bosley-Salih-Alorainy syndrome","type":"related"},{"name":"Human HOXA1 syndromes","type":"related"},{"name":"Navajo brainstem syndrome","type":"exact"}],"termid":"MONDO:0011099","xrefs":{"Monarch":{"xref_id":"0011099"}}}


id: PBO:0052804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 71","termid":"PBO:0052804"}


id: MONDO:0033809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated blepharochalasis","secondary_identifiers":["MEDGEN:1801812","GARD:22124","Orphanet:519390","UMLS:C5681341"],"termid":"MONDO:0033809","xrefs":{"Monarch":{"xref_id":"0033809"}}}


id: GO:0140455
data:
  {"annotated_genes":["SJAG_00552","SJAG_03794","SJAG_02419","SJAG_00173","SJAG_00436","SJAG_01556","SJAG_02341"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105353,118981],"is_not":false,"summary":null,"term":"GO:0140455"},{"annotations":[110008,110704,114004,110114,108371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071629"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the cytoplasm, which are either targeted to cytoplasmic proteasomes for degradation or protected by chaperones to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein quality control for misfolded or incompletely synthesized proteins","termid":"GO:0006515"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00173":null,"SJAG_00436":null,"SJAG_00552":null,"SJAG_01556":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_03794":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"cytoplasm protein quality control","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140455","terms_by_termid":{"GO:0071629":null,"GO:0140455":null}}


id: GO:1900118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of execution phase of apoptosis.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of execution phase of apoptosis","termid":"GO:1900117"},{"relation_name":"negatively_regulates","term_name":"execution phase of apoptosis","termid":"GO:0097194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of execution phase of apoptosis","synonyms":[{"name":"down regulation of execution phase of apoptosis","type":"exact"},{"name":"down-regulation of execution phase of apoptosis","type":"exact"},{"name":"downregulation of execution phase of apoptosis","type":"exact"},{"name":"inhibition of execution phase of apoptosis","type":"narrow"}],"termid":"GO:1900118"}


id: MONDO:0003574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the external ear.","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant ear neoplasm","termid":"MONDO:0003277"},{"relation_name":"is_a","term_name":"auditory system cancer","termid":"MONDO:0004532"},{"relation_name":"is_a","term_name":"external ear neoplasm","termid":"MONDO:0021235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"external ear cancer","secondary_identifiers":["MEDGEN:91157","NCIT:C4653","UMLS:C0349576","DOID:5665","SCTID:277156006"],"synonyms":[{"name":"cancer of external ear","type":"exact"},{"name":"external ear cancer","type":"exact"},{"name":"malignant external Ear neoplasm","type":"exact"},{"name":"malignant external Ear tumor","type":"exact"},{"name":"malignant external Ear tumour","type":"exact"},{"name":"malignant external ear neoplasm","type":"exact"},{"name":"malignant neoplasm of external Ear","type":"exact"},{"name":"malignant neoplasm of external ear","type":"exact"},{"name":"malignant neoplasm of the external Ear","type":"exact"},{"name":"malignant neoplasm of the external ear","type":"exact"},{"name":"malignant tumor of external Ear","type":"exact"},{"name":"malignant tumor of the external Ear","type":"exact"},{"name":"malignant tumour of external Ear","type":"exact"},{"name":"malignant tumour of the external Ear","type":"exact"}],"termid":"MONDO:0003574","xrefs":{"Monarch":{"xref_id":"0003574"}}}


id: GO:0046251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of limonene (4-isopropenyl-1-methyl-cyclohexene), a monocyclic monoterpene.","definition_xrefs":["PMID:10224006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limonene metabolic process","termid":"GO:0018923"},{"relation_name":"is_a","term_name":"monoterpene catabolic process","termid":"GO:0043694"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"limonene catabolic process","synonyms":[{"name":"limonene breakdown","type":"exact"},{"name":"limonene catabolism","type":"exact"},{"name":"limonene degradation","type":"exact"}],"termid":"GO:0046251"}


id: GO:0015124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of allantoate from one side of a membrane to the other. Allantoate is the end product of purine metabolism in mammals and some fish, formed form allantoin. It is widely distributed in plants as an important source of stored nitrogen.","definition_xrefs":["GOC:ai","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"allantoate transmembrane transporter activity","termid":"GO:0015124"}


id: MONDO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vascular diseases characterized by thickening and hardening of the walls of arteries inside the skull. There are three subtypes: (1) atherosclerosis with fatty deposits in the arterial intima; (2) Monckeberg's sclerosis with calcium deposits in the media and (3) arteriolosclerosis involving the small caliber arteries. Clinical signs include headache; confusion; transient blindness (amaurosis fugax); speech impairment; and hemiparesis.","definition_xrefs":["MESH:D002537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteriosclerosis disorder","termid":"MONDO:0002277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracranial arteriosclerosis","secondary_identifiers":["MEDGEN:3319","UMLS:C0007771","DOID:13097"],"termid":"MONDO:0001632","xrefs":{"Monarch":{"xref_id":"0001632"}}}


id: PBO:0067215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 282, pseudogene","termid":"PBO:0067215"}


id: PBO:0090905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding forkhead transcription factor Fkh2","termid":"PBO:0090905"}


id: GO:1904006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase D activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:11211872"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phospholipase D activity (obsolete GO:1904006)","synonyms":[{"name":"down regulation of choline phosphatase activity","type":"exact"},{"name":"down regulation of lecithinase D activity","type":"exact"},{"name":"down regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"down regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"down regulation of phospholipase D activity","type":"exact"},{"name":"down-regulation of choline phosphatase activity","type":"exact"},{"name":"down-regulation of lecithinase D activity","type":"exact"},{"name":"down-regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"down-regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"down-regulation of phospholipase D activity","type":"exact"},{"name":"downregulation of choline phosphatase activity","type":"exact"},{"name":"downregulation of lecithinase D activity","type":"exact"},{"name":"downregulation of lipophosphodiesterase II activity","type":"exact"},{"name":"downregulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"},{"name":"downregulation of phospholipase D activity","type":"exact"},{"name":"inhibition of choline phosphatase activity","type":"narrow"},{"name":"inhibition of lecithinase D activity","type":"narrow"},{"name":"inhibition of lipophosphodiesterase II activity","type":"narrow"},{"name":"inhibition of phosphatidylcholine phosphatidohydrolase activity","type":"narrow"},{"name":"inhibition of phospholipase D activity","type":"narrow"},{"name":"negative regulation of choline phosphatase activity","type":"exact"},{"name":"negative regulation of lecithinase D activity","type":"exact"},{"name":"negative regulation of lipophosphodiesterase II activity","type":"exact"},{"name":"negative regulation of phosphatidylcholine phosphatidohydrolase activity","type":"exact"}],"termid":"GO:1904006"}


id: PBO:0070829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 8","termid":"PBO:0070829"}


id: PBO:0045424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent-paired related homeobox pseudogene 4","termid":"PBO:0045424"}


id: GO:0010974
data:
  {"annotated_genes":["SJAG_03681","SJAG_03048","SJAG_06270","SJAG_00526","SJAG_03353","SJAG_02169","SJAG_00883","SJAG_01464","SJAG_00229","SJAG_04943","SJAG_03508","SJAG_02514","SJAG_01386","SJAG_03592","SJAG_01790","SJAG_04455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"},{"annotations":[91052,105396,107460,93787,93258,95971,99925,107594,110540,73135,116291,107903,92061,101612,93173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of division septum formation. division septum formation is he assembly and arrangement of a septum that spans the plasma membrane interface between progeny cells following cytokinesis.","definition_xrefs":["PMID:22786806","PMID:21246752","GOC:mtg_cell_cycle","PMID:19959363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of division septum assembly","termid":"GO:0032955"},{"relation_name":"is_a","term_name":"negative regulation of cell septum assembly","termid":"GO:1901892"},{"relation_name":"negatively_regulates","term_name":"division septum assembly","termid":"GO:0000917"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_00526":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_02169":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03681":null,"SJAG_04455":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of division septum assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1901139","GO:1902469"],"synonyms":[{"name":"inhibition of division septum assembly involved in cell cycle cytokinesis","type":"narrow"},{"name":"negative regulation of division septum formation","type":"exact"}],"termid":"GO:0010974","terms_by_termid":{"GO:0031030":null,"GO:1905757":null}}


id: PBO:0069203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 457, pseudogene","termid":"PBO:0069203"}


id: PBO:0080727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW and C2 domain containing 1","termid":"PBO:0080727"}


id: PR:Q10425
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01787","PRO:DNx","PANTHER:PTHR14068:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25G10.08","secondary_identifiers":["UniProtKB:Q10425"],"synonyms":[{"name":"Spom972h-EIF3B","type":"exact"},{"name":"eIF3 p90 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF3b (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 3 90 kDa subunit homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"spPrt1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translation initiation factor eIF3 p90 subunit homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10425"}


id: FYPO:0004703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is longer and has a larger volume than normal, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable curved elongated vegetative cell","termid":"FYPO:0002215"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002402"},{"relation_name":"is_a","term_name":"viable swollen elongated vegetative cell","termid":"FYPO:0002479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000004","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"viable curved, elongated, swollen vegetative cell","synonyms":[{"name":"curved elongated swollen viable cell","type":"exact"},{"name":"viable curved swollen elongated cell","type":"exact"},{"name":"viable curved, elongated, swollen cell during vegetative growth","type":"exact"},{"name":"viable curved, elongated, swollen vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004703"}


id: PBO:0062375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 18 pseudogene","termid":"PBO:0062375"}


id: PBO:0072996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scm polycomb group protein like 4","termid":"PBO:0072996"}


id: GO:0070574
data:
  {"annotated_genes":["SJAG_03497","SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64369],"is_not":false,"summary":null,"term":"GO:0070574"},{"annotations":[118604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"}]},"cv_name":"biological_process","definition":"A process in which a cadmium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cadmium ion transport","termid":"GO:0015691"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_03497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"cadmium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"cadmium ion membrane transport","type":"exact"},{"name":"transmembrane cadmium transport","type":"exact"}],"termid":"GO:0070574","terms_by_termid":{"GO:0036249":null,"GO:0070574":null}}


id: PBO:0000726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclease, XP-G family (predicted)","termid":"PBO:0000726"}


id: PBO:0041087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and PHD finger containing 3","termid":"PBO:0041087"}


id: PATO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased position","termid":"PATO:0001475"},{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased angle to","termid":"PATO:0002327"}


id: GO:0019646
data:
  {"annotated_genes":["SJAG_02398","SJAG_00755","SJAG_00976","SJAG_00260","SJAG_01763","SJAG_01190","SJAG_02744","SJAG_01671","SJAG_00601","SJAG_07007","SJAG_MIT20","SJAG_05629","SJAG_MIT13","SJAG_04152","SJAG_02504","SJAG_MIT03","SJAG_01355","SJAG_03920","SJAG_01077","SJAG_MIT04","SJAG_03490","SJAG_07006","SJAG_01490","SJAG_00080","SJAG_02646"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119482,72394,79200,114612,115042,74653,76628,119454,108652,119432,115847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006123"},{"annotations":[113240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006120"},{"annotations":[89140,89508,113579,117145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006121"},{"annotations":[72466,74069,113786,61926,119459,76185,76032,76627,104419,118077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006122"}]},"cv_name":"biological_process","definition":"A process in which a series of electron carriers operate together to transfer electrons from donors such as NADH and FADH2 to oxygen to generate a transmembrane electrochemical gradient.","definition_xrefs":["GOC:mtg_electron_transport","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"respiratory electron transport chain","termid":"GO:0022904"},{"relation_name":"part_of","term_name":"oxidative phosphorylation","termid":"GO:0006119"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00260":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01490":null,"SJAG_01671":null,"SJAG_01763":null,"SJAG_02398":null,"SJAG_02504":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_03490":null,"SJAG_03920":null,"SJAG_04152":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"aerobic electron transport chain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006137","GO:0006138","GO:0006136"],"synonyms":[{"name":"NADH-O2 electron transport","type":"narrow"},{"name":"succinate-O2 electron transport","type":"narrow"},{"name":"ubiquinone-8-O2 electron transport","type":"narrow"}],"termid":"GO:0019646","terms_by_termid":{"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null}}


id: MONDO:1010053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism, non-human animal","termid":"MONDO:1010057"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, non-human animal","secondary_identifiers":["OMIA:000424"],"termid":"MONDO:1010053","xrefs":{"Monarch":{"xref_id":"1010053"}}}


id: GO:0070767
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains BRCA1 and Rad 51, and is involved in the control of recombination and of genome integrity.","definition_xrefs":["PMID:9008167","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BRCA1-Rad51 complex","termid":"GO:0070767"}


id: PBO:0016086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Pwp1 (predicted)","termid":"PBO:0016086"}


id: PBO:0050761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 23","termid":"PBO:0050761"}


id: GO:0030394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructoseglycine, a fructose molecule containing a glycine group in place of a hydroxyl group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"fructosamine metabolic process","termid":"GO:0030389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fructoseglycine metabolic process","synonyms":[{"name":"fructoseglycine metabolism","type":"exact"}],"termid":"GO:0030394"}


id: GO:0019937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The autocatalytic formation of isopeptide bonds by ligation of peptidyl-lysine and peptidyl-asparagine residues; known to occur in the capsid of some bacteriophage, such as HK97, where it is thought to provide a mechanism for stabilizing the capsid.","definition_xrefs":["RESID:AA0294"],"gene_count":0,"genotype_count":0,"name":"obsolete protein catenane formation via N6-(L-isoaspartyl)-L-lysine, autocatalytic (obsolete GO:0019937)","termid":"GO:0019937"}


id: MONDO:0700277
data:
  {"annotated_genes":["SJAG_00637"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030677"},{"annotations":[85860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013722"}]},"cv_name":"mondo","definition":"Disorder in which the cause of disease is a variation in the POLR3B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00637":null},"genotype_count":0,"is_obsolete":false,"name":"POLR3B-related disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700277","terms_by_termid":{"MONDO:0013722":null,"MONDO:0030677":null},"xrefs":{"Monarch":{"xref_id":"0700277"}}}


id: GO:0072104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a glomerular capillary. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiogenesis","termid":"GO:0001525"},{"relation_name":"part_of","term_name":"glomerulus vasculature morphogenesis","termid":"GO:0072103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular capillary formation","termid":"GO:0072104"}


id: GO:0102614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: germacra-1(10),4,11(13)-trien-12-oate + O2 + reduced [NADPH--hemoprotein reductase] = 8beta-hydroxygermacra-1(10),4,11(13)-trien-12-oate + H(+) + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:57964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"germacrene A acid 8beta-hydroxylase activity","secondary_identifiers":["EC:1.14.14.168","MetaCyc:RXN-15460"],"termid":"GO:0102614"}


id: GO:2001220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of G2 phase of mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G2 phase of mitotic cell cycle (obsolete GO:2001220)","synonyms":[{"name":"negative regulation of G2 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:2001220"}


id: PR:Q10414
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CWF19-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00248","PANTHER:PTHR12072:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CWF19-like protein mug161 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.09","secondary_identifiers":["UniProtKB:Q10414"],"synonyms":[{"name":"Spom972h-CWF19L1","type":"exact"},{"name":"meiotically up-regulated gene 161 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10414"}


id: MONDO:0016322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuroendocrine cell hyperplasia of infancy (NCHI) is a non-lethal pediatric form of interstitial lung disease (ILD) characterized by tachypnea without respiratory failure.","definition_xrefs":["Orphanet:217560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"},{"relation_name":"is_a","term_name":"interstitial lung disease specific to infancy","termid":"MONDO:0017019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroendocrine cell hyperplasia of infancy","secondary_identifiers":["NCIT:C120169","GARD:20517","SCTID:707435002","UMLS:C3161105","ICD10CM:J84.841","icd11.foundation:1641999159","MEDGEN:837309"],"synonyms":[{"name":"CTI","type":"exact"},{"name":"NCHI","type":"exact"},{"name":"NEHI","type":"exact"},{"name":"chronic tachypnoe of infancy","type":"exact"}],"termid":"MONDO:0016322","xrefs":{"Monarch":{"xref_id":"0016322"}}}


id: GO:0140348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of lysophosphatidylcholine from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:26945070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid flippase activity","termid":"GO:0140333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"lysophosphatidylcholine flippase activity","synonyms":[{"name":"lysophosphatidylcholine flippase activity (exoplasmic to cytosolic leaflet)","type":"exact"}],"termid":"GO:0140348"}


id: GO:0098987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the modification of synaptic structure and as a result regulates synaptic transmission.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"is_a","term_name":"regulation of modification of synaptic structure","termid":"GO:1905244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of modification of synapse structure, modulating synaptic transmission","termid":"GO:0098987"}


id: GO:0102528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + 7,8,4'-trihydroxyflavone = H+ + S-adenosyl-L-homocysteine + 7,4'-dihydroxy, 8-methoxyflavone.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 7,8,4'-trihydroxyflavone methyltransferase activity (obsolete GO:0102528)","termid":"GO:0102528"}


id: MONDO:0000422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inborn glycogen metabolism disorder (obsolete MONDO:0000422)","termid":"MONDO:0000422","xrefs":{"Monarch":{"xref_id":"0000422"}}}


id: PBO:0049967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 13","termid":"PBO:0049967"}


id: MONDO:0005172
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id: GO:0102379
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: steviolbioside + UDP-alpha-D-glucose = stevioside + UDP.","definition_xrefs":["RHEA:61744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"steviolbioside glucosyltransferase activity (stevioside forming)","secondary_identifiers":["MetaCyc:RXN-13514"],"termid":"GO:0102379"}


id: PBO:0062898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxoeicosanoid receptor 1","termid":"PBO:0062898"}


id: MONDO:0021568
data:
  {"annotated_genes":["SJAG_00516","SJAG_01183","SJAG_04260","SJAG_01370","SJAG_03375","SJAG_03371","SJAG_02977","SJAG_01896","SJAG_04978"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011422"},{"annotations":[87374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010359"},{"annotations":[87242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013458"},{"annotations":[85927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859328"},{"annotations":[87000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013163"},{"annotations":[87554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010645"},{"annotations":[85346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"},{"annotations":[85766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044726"},{"annotations":[86470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011268"},{"annotations":[87151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"}]},"cv_name":"mondo","definition":"A disease that involves the renal tubule.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01183":null,"SJAG_01370":null,"SJAG_01896":null,"SJAG_02977":null,"SJAG_03371":null,"SJAG_03375":null,"SJAG_04260":null,"SJAG_04978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal tubule disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0151747","EFO:0009566","MEDGEN:57484","SCTID:95568003","ICD9:588.89"],"synonyms":[{"name":"disease of renal tubule","type":"exact"},{"name":"disease or disorder of renal tubule","type":"exact"},{"name":"disorder of renal tubule","type":"exact"},{"name":"renal tubular disease","type":"exact"},{"name":"renal tubular disorder","type":"exact"},{"name":"renal tubule disease","type":"exact"},{"name":"renal tubule disease or disorder","type":"exact"}],"termid":"MONDO:0021568","terms_by_termid":{"MONDO:0010359":null,"MONDO:0010645":null,"MONDO:0011268":null,"MONDO:0011301":null,"MONDO:0011422":null,"MONDO:0013163":null,"MONDO:0013458":null,"MONDO:0044726":null,"MONDO:0054565":null,"MONDO:0859328":null},"xrefs":{"Monarch":{"xref_id":"0021568"}}}


id: FYPO:0004696
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to one or more fatty acids (usually supplied as the corresponding anions). Cells stop growing (and may die) at a concentration of fatty acid that allows wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:12963726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to fatty acid","synonyms":[{"name":"hypersensitive to fatty acid","type":"exact"},{"name":"sensitive to fatty acid anion","type":"exact"},{"name":"sensitive to fatty acid during mitotic cell cycle","type":"related"},{"name":"sensitive to fatty acid during vegetative growth","type":"exact"},{"name":"sensitive to free fatty acids","type":"exact"}],"termid":"FYPO:0004696"}


id: PBO:0079227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 4 pseudogene 1","termid":"PBO:0079227"}


id: MONDO:0006417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse large B-cell lymphoma that arises from the small intestine.","definition_xrefs":["NCIT:C96055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"small intestine lymphoma","termid":"MONDO:0001852"},{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570","MONDO:0004335"],"is_obsolete":false,"name":"small intestinal diffuse large B-cell lymphoma","secondary_identifiers":["UMLS:C3272522","EFO:1000534","MEDGEN:474155"],"synonyms":[{"name":"diffuse large B-cell lymphoma of small intestine","type":"exact"},{"name":"small intestinal diffuse large B-cell lymphoma","type":"exact"},{"name":"small intestine diffuse large B-cell lymphoma","type":"exact"}],"termid":"MONDO:0006417","xrefs":{"Monarch":{"xref_id":"0006417"}}}


id: PBO:0052671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 39","termid":"PBO:0052671"}


id: PBO:0034573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription_from_CRE_promoter","termid":"PBO:0034573"}


id: GO:0042425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of choline (2-hydroxyethyltrimethylammonium), an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline metabolic process","termid":"GO:0019695"},{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline biosynthetic process","secondary_identifiers":["MetaCyc:PWY-4762"],"synonyms":[{"name":"choline anabolism","type":"exact"},{"name":"choline biosynthesis","type":"exact"},{"name":"choline formation","type":"exact"},{"name":"choline synthesis","type":"exact"}],"termid":"GO:0042425"}


id: GO:0106346
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120048"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an snRNA molecule.","definition_xrefs":["PMID:27573892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"snRNA methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106346","terms_by_termid":{"GO:0120048":null}}


id: PBO:0030640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell_following_anaerobic_growth","termid":"PBO:0030640"}


id: GO:1901627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of postsynaptic membrane organization.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane organization","termid":"GO:1901626"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"postsynaptic membrane organization","termid":"GO:0001941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of postsynaptic membrane organization","synonyms":[{"name":"down regulation of postsynaptic membrane organisation","type":"exact"},{"name":"down regulation of postsynaptic membrane organization","type":"exact"},{"name":"down-regulation of postsynaptic membrane organisation","type":"exact"},{"name":"down-regulation of postsynaptic membrane organization","type":"exact"},{"name":"downregulation of postsynaptic membrane organisation","type":"exact"},{"name":"downregulation of postsynaptic membrane organization","type":"exact"},{"name":"inhibition of postsynaptic membrane organisation","type":"narrow"},{"name":"inhibition of postsynaptic membrane organization","type":"narrow"},{"name":"negative regulation of post-synaptic membrane organization","type":"exact"},{"name":"negative regulation of postsynaptic membrane organisation","type":"exact"}],"termid":"GO:1901627"}


id: MONDO:0004054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute inflammation of lacrimal passage","termid":"MONDO:0004055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute canaliculitis","secondary_identifiers":["ICD9:375.31","UMLS:C0339130","DOID:6969","SCTID:84399007","MEDGEN:572974"],"synonyms":[{"name":"acute canaliculitis, lacrimal","type":"exact"},{"name":"acute lacrimal canaliculitis","type":"exact"}],"termid":"MONDO:0004054","xrefs":{"Monarch":{"xref_id":"0004054"}}}


id: MONDO:0006632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoarthritis of the hands usually happens as part of nodal osteoarthritis (a form of osteoarthritis that runs in families). This mainly affects women and often starts in your 40s or 50s, around the menopause (the time when menstruation ends and it’s no longer possible to have children).","definition_xrefs":["EFO:1000789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis","termid":"MONDO:0005178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, hand","secondary_identifiers":["UMLS:C0263746","MEDGEN:472992"],"termid":"MONDO:0006632","xrefs":{"Monarch":{"xref_id":"0006632"}}}


id: PBO:0091692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-methyltransferase, human COMT catechol homolog 1","termid":"PBO:0091692"}


id: PBO:0068602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 53, pseudogene","termid":"PBO:0068602"}


id: GO:1904001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of pyrimidine-containing compound salvage.","definition_xrefs":["GOC:al","GOC:TermGenie","PMID:23695302","GO_REF:0000063"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of pyrimidine-containing compound salvage by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:1904001)","synonyms":[{"name":"activation of pyrimidine salvage by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"activation of pyrimidine-containing compound salvage by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of pyrimidine salvage by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of pyrimidine salvage by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of pyrimidine-containing compound salvage by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of pyrimidine salvage by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up-regulation of pyrimidine-containing compound salvage by positive regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of pyrimidine salvage by positive regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"upregulation of pyrimidine-containing compound salvage by positive regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1904001"}


id: PBO:0016071
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe mPR1","termid":"PBO:0016071"}


id: PBO:0071712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 10","termid":"PBO:0071712"}


id: MONDO:0008686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Woolly hair is a rare congenital abnormality of the structure of the scalp hair marked by extreme kinkiness of the hair.","definition_xrefs":["Orphanet:170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair anomaly","termid":"MONDO:0019278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated familial wooly hair disorder","secondary_identifiers":["HP:0002224","SCTID:52564001","DOID:0111572","GARD:5597","MedDRA:10048017","MEDGEN:87469","UMLS:C0343073","MESH:C536745"],"synonyms":[{"name":"ADWH","type":"related"},{"name":"familial woolly hair (autosomal recessive)","type":"related"},{"name":"familial woolly hair syndrome","type":"exact"},{"name":"familial wooly hair (autosomal recessive)","type":"related"},{"name":"familial wooly hair syndrome","type":"exact"},{"name":"hereditary woolly hair (autosomal dominant)","type":"related"},{"name":"hereditary woolly hair syndrome","type":"exact"},{"name":"hereditary wooly hair (autosomal dominant)","type":"related"},{"name":"hereditary wooly hair syndrome","type":"exact"},{"name":"woolly hair","type":"exact"},{"name":"woolly hair syndrome","type":"related"},{"name":"woolly hair, autosomal dominant","type":"related"},{"name":"wooly hair","type":"exact"},{"name":"wooly hair syndrome","type":"related"},{"name":"wooly hair, autosomal dominant","type":"related"}],"termid":"MONDO:0008686","xrefs":{"Monarch":{"xref_id":"0008686"}}}


id: PR:P36590
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymidylate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10344:SF0","PRO:DNx","OMA:SCHPO05042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.07c","secondary_identifiers":["UniProtKB:P36590"],"synonyms":[{"name":"Spom972h-DTYMK","type":"exact"},{"name":"dTMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36590"}


id: PBO:0086233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with Rab GTPases; localized to late Golgi vesicles; computational analysis of large-scale protein-protein interaction data suggests a possible role in vesicle-mediated transport","termid":"PBO:0086233"}


id: GO:0034160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 8 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 8 signaling pathway","termid":"GO:0034159"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 8 signaling pathway","termid":"GO:0034158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 8 signaling pathway","synonyms":[{"name":"negative regulation of TLR8 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 8 signalling pathway","type":"exact"}],"termid":"GO:0034160"}


id: GO:0140776
data:
  {"annotated_genes":["SJAG_03345","SJAG_02624","SJAG_01530","SJAG_04566","SJAG_03025","SJAG_04187"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140775"},{"annotations":[92874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003789"},{"annotations":[104557,89593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140545"},{"annotations":[118554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0170060"},{"annotations":[96862,113166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008568"}]},"cv_name":"molecular_function","definition":"A molecular function that involves direct binding to one of the subunits of a protein-containing complex and promoting the dissociation of one or many subunits. This often happens by changing the conformation of the protein being bound, which decreases its affinity for the rest of the complex.","definition_xrefs":["PMID:29779865","PMID:34836783","PMID:23727094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01530":null,"SJAG_02624":null,"SJAG_03025":null,"SJAG_03345":null,"SJAG_04187":null,"SJAG_04566":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"protein-containing complex destabilizing activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein unfoldase activity","type":"broad"}],"termid":"GO:0140776","terms_by_termid":{"GO:0003789":null,"GO:0008568":null,"GO:0140545":null,"GO:0140775":null,"GO:0170060":null}}


id: FYPO:0007929
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to phloxine B. Cells stop growing (and may die) at a concentration of phloxine B that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to phloxine B","synonyms":[{"name":"sensitive to phloxine B during vegetative growth","type":"exact"}],"termid":"FYPO:0007929"}


id: PBO:0067425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 544, pseudogene","termid":"PBO:0067425"}


id: GO:0097519
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex consisting of a higher-order oligomer of strand exchange proteins (recombinases) on single-stranded DNA.","definition_xrefs":["GOC:cjm","PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA recombinase complex","termid":"GO:0097519"}


id: PR:O94528
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A multidrug transporter MdfA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03591","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caffeine resistance protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC609.04","secondary_identifiers":["UniProtKB:O94528"],"synonyms":[{"name":"Spom972h-cmr","type":"exact"}],"termid":"PR:O94528"}


id: PR:O13972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine hydroxymethyltransferase, cytosolic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01280","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase, cytosolic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.12c","secondary_identifiers":["UniProtKB:O13972"],"synonyms":[{"name":"SHMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SHMT1","type":"exact"},{"name":"glycine hydroxymethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"serine methylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13972"}


id: FYPO:0007597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which CLRC complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:23613586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished CLRC complex binding","synonyms":[{"name":"CLRC binding complex abolished","type":"exact"},{"name":"abolished CLRC ubiquitin ligase complex binding","type":"exact"}],"termid":"FYPO:0007597"}


id: MONDO:0015566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"2q24 microdeletion syndrome is a chromosomal anomaly consisting of a partial long arm deletion of chromosome 2 and characterized clinically by a wide range of manifestations (depending on the specific region deleted) which can include seizures, microcephaly, dysmorphic features, cleft palate, eye abnormalities (coloboma, cataract and microphthalmia), growth retardation, failure to thrive, heart defects, limb anomalies, developmental delay and autism.","definition_xrefs":["Orphanet:1617"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 2","termid":"MONDO:0016901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2q24 microdeletion syndrome","secondary_identifiers":["SCTID:719658006","UMLS:C2931816","MESH:C538316","MEDGEN:419168","GARD:3746"],"synonyms":[{"name":"2q24 deletion","type":"related"},{"name":"Del(2)(q24)","type":"exact"},{"name":"chromosome 2q24 microdeletion syndrome","type":"related"},{"name":"deletion 2q24","type":"related"},{"name":"monosomy 2q24","type":"exact"}],"termid":"MONDO:0015566","xrefs":{"Monarch":{"xref_id":"0015566"}}}


id: FYPO:0008165
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is decreased during prometaphase of mitosis.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to kinetochore during mitotic M phase","termid":"FYPO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to kinetochore during mitotic prometaphase","termid":"FYPO:0008165"}


id: PR:O14053
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 36 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04369","PANTHER:PTHR13889:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 21 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.07","secondary_identifiers":["UniProtKB:O14053"],"synonyms":[{"name":"Spom972h-WDR36","type":"exact"},{"name":"U3 snoRNA-associated protein 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14053"}


id: PATO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed dorsolaterally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsolateral orientation","synonyms":[{"name":"dorsolaterally directed","type":"exact"}],"termid":"PATO:0002496"}


id: PBO:0049155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 1C","termid":"PBO:0049155"}


id: GO:0061327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior Malpighian tubule over time, from its formation to the mature structure. The pair of anterior tubules arise from a dorsal region of the embryonic hindgut and projects forwards through the body cavity. A Malpighian tubule is a fine, thin-walled excretory tubule in insects which connects with the posterior part of the gut.","definition_xrefs":["PMID:19783135","GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Malpighian tubule development","termid":"GO:0072002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior Malpighian tubule development","termid":"GO:0061327"}


id: PBO:0077020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"theg spermatid protein like","termid":"PBO:0077020"}


id: PBO:0069237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 492, pseudogene","termid":"PBO:0069237"}


id: PBO:0013765
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vps38 was previously annotated as atg14","termid":"PBO:0013765"}


id: MONDO:0022907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous sclerosis","termid":"MONDO:0022907","xrefs":{"Monarch":{"xref_id":"0022907"}}}


id: PBO:0018187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 beta subunit, guanyl-nucleotide exchange factor (eEF1B)","termid":"PBO:0018187"}


id: MOD:00848
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with a particular compound used as a reagent.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reagent derivatized residue","termid":"MOD:00848"}


id: PBO:0082580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cholinephosphotransferase; required for phosphatidylcholine biosynthesis and for inositol-dependent regulation of EPT1 transcription; CPT1 has a paralog, EPT1, that arose from the whole genome duplication","termid":"PBO:0082580"}


id: MONDO:0017754
data:
  {"annotated_genes":["SJAG_01372","SJAG_03785","SJAG_02896","SJAG_02876","SJAG_05213","SJAG_04109","SJAG_03961","SJAG_03363","SJAG_03011","SJAG_04944","SJAG_05283","SJAG_00938","SJAG_05194","SJAG_01344","SJAG_01841"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008294"},{"annotations":[86865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008822"},{"annotations":[87120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[87305,87304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[86209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[85795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[85638,85640,85639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009380"},{"annotations":[86050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[85749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030048"},{"annotations":[86201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007369"},{"annotations":[85796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013000"},{"annotations":[87243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"},{"annotations":[85488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008319"},{"annotations":[86069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008297"},{"annotations":[86714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957577"},{"annotations":[87052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010420"},{"annotations":[87050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020721"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of porphyrin-containing compound metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"porphyrin metabolism disease","termid":"MONDO:0037821"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01344":null,"SJAG_01372":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_03785":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04944":null,"SJAG_05194":null,"SJAG_05213":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of porphyrin metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21346","Orphanet:309813","SCTID:403832004","ICD10CM:E80.4"],"synonyms":[{"name":"disorder of porphyrin and haem metabolism","type":"broad"},{"name":"inborn disorder of porphyrin and haem metabolism","type":"exact"},{"name":"inborn error of porphyrin-containing compound metabolic process","type":"exact"},{"name":"inborn porphyrin-containing compound metabolic process disorder","type":"exact"},{"name":"inherited disorder of porphyrin metabolism","type":"exact"},{"name":"rare inborn error of porphyrin-containing compound metabolic process","type":"exact"}],"termid":"MONDO:0017754","terms_by_termid":{"MONDO:0007369":null,"MONDO:0008294":null,"MONDO:0008296":null,"MONDO:0008297":null,"MONDO:0008319":null,"MONDO:0008822":null,"MONDO:0009380":null,"MONDO:0009902":null,"MONDO:0010420":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0013000":null,"MONDO:0020721":null,"MONDO:0030048":null,"MONDO:0030810":null,"MONDO:0031040":null,"MONDO:0957577":null},"xrefs":{"Monarch":{"xref_id":"0017754"}}}


id: MONDO:0021459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the esophagus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"thoracic benign neoplasm","termid":"MONDO:0000634"},{"relation_name":"is_a","term_name":"neoplasm of esophagus","termid":"MONDO:0021355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of esophagus","secondary_identifiers":["ICD9:211.0","UMLS:C0153942","MEDGEN:102297","NCIT:C3598","SCTID:92091003","ICD10CM:D13.0"],"synonyms":[{"name":"benign esophageal neoplasm","type":"exact"},{"name":"benign esophageal tumor","type":"exact"},{"name":"benign esophageal tumour","type":"exact"},{"name":"benign esophagus neoplasm","type":"exact"},{"name":"benign esophagus tumor","type":"exact"},{"name":"benign neoplasm of the esophagus","type":"exact"},{"name":"benign neoplasm of the oesophagus","type":"exact"},{"name":"benign oesophagus neoplasm","type":"exact"},{"name":"benign oesophagus tumour","type":"exact"},{"name":"benign tumor of esophagus","type":"exact"},{"name":"benign tumor of the esophagus","type":"exact"},{"name":"benign tumour of oesophagus","type":"exact"},{"name":"benign tumour of the oesophagus","type":"exact"},{"name":"esophagus benign neoplasm","type":"exact"},{"name":"oesophagus benign neoplasm","type":"exact"}],"termid":"MONDO:0021459","xrefs":{"Monarch":{"xref_id":"0021459"}}}


id: PBO:0084126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexameric ring ATPase that remodels chromosome axis protein Hop1p; nucleolar component of the pachytene checkpoint, which prevents chromosome segregation when recombination and chromosome synapsis are defective; also represses meiotic interhomolog recombination in rDNA; required for meiotic double-stranded break formation","termid":"PBO:0084126"}


id: GO:0052847
data:
  {"annotated_genes":["SJAG_01154","SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89045,105556],"is_not":false,"summary":null,"term":"GO:0052847"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,5-bisdiphospho-1D-myo-inositol 2,3,4,6-tetrakisphosphate + H2O = 1-diphospho-1D-myo-inositol 2,3,4,5,6-pentakisphosphate + phosphate + H+.","definition_xrefs":["PMID:11502751","MetaCyc:RXN-10975","PMID:10827188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol bisdiphosphate tetrakisphosphate diphosphatase activity","termid":"GO:0052841"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052847","terms_by_termid":{"GO:0052847":null}}


id: FYPO:0007057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of substances via vesicles from recycling endosomes to the Golgi is abnormal.","definition_xrefs":["PomBase:mah","GO:0071955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vesicle-mediated transport during vegetative growth","termid":"FYPO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal recycling endosome to Golgi transport","synonyms":[{"name":"abnormal recycling endosome to Golgi transport during mitotic cell cycle","type":"related"},{"name":"abnormal recycling endosome to Golgi transport during vegetative growth","type":"exact"}],"termid":"FYPO:0007057"}


id: PBO:0004388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex component Pob3","termid":"PBO:0004388"}


id: PBO:0018243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA queuosine modification protein","termid":"PBO:0018243"}


id: PBO:0070313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY3 pseudogene 2","termid":"PBO:0070313"}


id: CHEBI:29101
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium(1+)","termid":"CHEBI:29101"}


id: GO:0034867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethylpent-2-enoyl-CoA + H2O = 2,4,4-trimethyl-3-hydroxypentanoyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethylpent-2-enoyl-CoA hydratase activity (obsolete GO:0034867)","termid":"GO:0034867"}


id: FYPO:0001475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle pole body is broken into fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body morphology","termid":"FYPO:0001474"},{"relation_name":"is_a","term_name":"fragmented spindle pole body","termid":"FYPO:0006404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"fragmented mitotic spindle pole body","synonyms":[{"name":"fragmented mitotic SPB","type":"exact"},{"name":"fragmented spindle pole body during mitotic cell cycle","type":"exact"},{"name":"fragmented spindle pole body during vegetative growth","type":"exact"},{"name":"mitotic spindle pole body fragmentation","type":"exact"}],"termid":"FYPO:0001475"}


id: PBO:0071428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 34","termid":"PBO:0071428"}


id: PBO:0086388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative cell wall mannoprotein; member of the Srp1p/Tip1p family of serine-alanine-rich proteins; transcription is induced by cold shock and anaerobiosis; TIR2 has a paralog, TIR3, that arose from the whole genome duplication","termid":"PBO:0086388"}


id: GO:0009260
data:
  {"annotated_genes":["SJAG_00533","SJAG_02564","SJAG_00542","SJAG_01081","SJAG_MIT37","SJAG_00438","SJAG_04849","SJAG_00694","SJAG_MIT09","SJAG_04354","SJAG_03355","SJAG_01859","SJAG_00985","SJAG_02105","SJAG_03708","SJAG_01070","SJAG_03164","SJAG_04845","SJAG_00133","SJAG_04713","SJAG_04422","SJAG_00964","SJAG_03114","SJAG_02038","SJAG_04681","SJAG_02850","SJAG_03925","SJAG_04709","SJAG_01661","SJAG_00044","SJAG_04634","SJAG_00444","SJAG_07003","SJAG_04122","SJAG_05204","SJAG_MIT15","SJAG_03140","SJAG_01298","SJAG_04123","SJAG_00836","SJAG_00915","SJAG_02598","SJAG_02887","SJAG_06634","SJAG_01814","SJAG_02364","SJAG_05024","SJAG_00197","SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77147,79163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[63432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[70325,72115,65604,60172,58024,57119,64592,77119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[59526,62025,61265,59192,57253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[72292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[57108,74298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[80744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[68257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[64652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[68259,93300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[73054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[63169,59525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[75993,101533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[64650,75213,102577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[65105,75994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[118401],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[89453,102158,95181,109156,103377,93610,108264,119463,119469,93183,94198,105366,119475,108172,116233,104021,103995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[80746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[68258,93301,88772,87785,92299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[64651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"},{"annotations":[108640,75995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a ribonucleotide, a compound consisting of ribonucleoside (a base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"ribonucleotide metabolic process","termid":"GO:0009259"},{"relation_name":"is_a","term_name":"ribose phosphate biosynthetic process","termid":"GO:0046390"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00133":null,"SJAG_00197":null,"SJAG_00438":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00542":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00964":null,"SJAG_00985":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02364":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02850":null,"SJAG_02887":null,"SJAG_03114":null,"SJAG_03140":null,"SJAG_03164":null,"SJAG_03355":null,"SJAG_03708":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04123":null,"SJAG_04354":null,"SJAG_04422":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_04845":null,"SJAG_04849":null,"SJAG_05024":null,"SJAG_05204":null,"SJAG_06634":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ribonucleotide anabolism","type":"exact"},{"name":"ribonucleotide biosynthesis","type":"exact"},{"name":"ribonucleotide formation","type":"exact"},{"name":"ribonucleotide synthesis","type":"exact"}],"termid":"GO:0009260","terms_by_termid":{"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006189":null,"GO:0006225":null,"GO:0006228":null,"GO:0006241":null,"GO:0009224":null,"GO:0009398":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0042776":null,"GO:0044205":null,"GO:0044206":null,"GO:0044208":null,"GO:0044209":null,"GO:0044210":null,"GO:0044211":null,"GO:0046705":null,"GO:1905707":null}}


id: GO:0031026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that possesses glutamate synthase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glutamate synthase complex","termid":"GO:0031026"}


id: MONDO:1012280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tremor, non-human animal","termid":"MONDO:1011861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, domestic cat","secondary_identifiers":["OMIA:001016-9685"],"termid":"MONDO:1012280","xrefs":{"Monarch":{"xref_id":"1012280"}}}


id: PBO:0017083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Mug117","termid":"PBO:0017083"}


id: GO:2000772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular senescence.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular senescence","termid":"GO:0090398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular senescence","termid":"GO:2000772"}


id: MONDO:0009850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"chronic periodontitis","termid":"MONDO:0005593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodontitis, chronic, adult","secondary_identifiers":["OMIM:260950","MEDGEN:120593","UMLS:C0266929","SCTID:74797001"],"synonyms":[{"name":"periodontitis, adult","type":"broad"},{"name":"periodontitis, chronic","type":"broad"}],"termid":"MONDO:0009850","xrefs":{"Monarch":{"xref_id":"0009850"}}}


id: GO:2001135
data:
  {"annotated_genes":["SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88216],"is_not":false,"summary":null,"term":"GO:2001135"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endocytic recycling.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"endocytic recycling","termid":"GO:0032456"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of endocytic recycling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of retrograde transport of endocytic vesicles","type":"related"}],"termid":"GO:2001135","terms_by_termid":{"GO:2001135":null}}


id: GO:0072047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis of a nephron. The proximal/distal axis is defined by a line that runs from the center of the kidney (proximal end) outward (distal end).","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal pattern formation","termid":"GO:0009954"},{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation involved in nephron development","synonyms":[{"name":"proximal-distal pattern formation involved in nephron development","type":"exact"},{"name":"proximal/distal nephron patterning","type":"exact"}],"termid":"GO:0072047"}


id: PBO:0072040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 10","termid":"PBO:0072040"}


id: MOD:01149
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the N6-amino of a peptidyl lysine with the carboxyl-terminal glycine of a sumo (Small Ubiquitin-related MOdifier) protein.","definition_xrefs":["PubMed:12612601","PubMed:18688235"],"direct_ancestors":[{"relation_name":"contains","term_name":"N6-glycyl-L-lysine","termid":"MOD:00134"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"sumoylated lysine","termid":"MOD:01149"}


id: PBO:0050857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interactor of little elongation complex ELL subunit 2 pseudogene 2","termid":"PBO:0050857"}


id: PBO:0052267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDM4A antisense RNA 1","termid":"PBO:0052267"}


id: MONDO:0100463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive inborn disorder of cobalamin metabolism caused by biallelic variants in MMADHC. Depending on the type and location of variants in MMADHC, patients may present with methylmalonic aciduria, homocystinuria, or both. MMADHC has been reported to result in the cblD complementation group of cobalamin disorders.","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"methylmalonic aciduria and/or homocystinuria, cblD type","termid":"MONDO:0100463","xrefs":{"Monarch":{"xref_id":"0100463"}}}


id: PBO:0066817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 116","termid":"PBO:0066817"}


id: PBO:0049245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GrpE like 2, mitochondrial","termid":"PBO:0049245"}


id: MONDO:0008070
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85623],"is_not":false,"summary":null,"term":"MONDO:0008070"}]},"cv_name":"mondo","definition":"An inherited myopathy caused by mutations in the ACTA1 gene, encoding actin, alpha skeletal muscle. The phenotype is highly variable, and as such attempts at classification by clinical features is not optimal. Generally, affected individuals have generalized muscle weakness, typically involving proximal muscles, the face, bulbar and respiratory muscles.","definition_xrefs":["NCIT:C129870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe congenital nemaline myopathy","termid":"MONDO:0015735"},{"relation_name":"is_a","term_name":"intermediate nemaline myopathy","termid":"MONDO:0015736"},{"relation_name":"is_a","term_name":"typical nemaline myopathy","termid":"MONDO:0015737"},{"relation_name":"is_a","term_name":"childhood-onset nemaline myopathy","termid":"MONDO:0015738"},{"relation_name":"is_a","term_name":"alpha-actinopathy","termid":"MONDO:0100084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital myopathy 2a, typical, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3711389","MESH:C580202","GARD:10111","DOID:0110927","MEDGEN:777997","MESH:C579880","OMIM:161800","Orphanet:98904","SCTID:702349003"],"synonyms":[{"name":"ACTA1 nemaline myopathy","type":"exact"},{"name":"CMYO2A","type":"exact"},{"name":"NEM3","type":"related"},{"name":"actin accumulation myopathy","type":"exact"},{"name":"actin accumulation myopathy (disorder)","type":"exact"},{"name":"actin myopathy","type":"exact"},{"name":"congenital myopathy 2a, typical, autosomal dominant","type":"exact"},{"name":"congenital myopathy with excess of thin filaments","type":"exact"},{"name":"myopathy, actin, congenital, with Excess of thin myofilaments","type":"related"},{"name":"myopathy, actin, congenital, with cores","type":"related"},{"name":"nemaline myopathy 3","type":"related"},{"name":"nemaline myopathy 3, autosomal dominant or recessive","type":"exact"},{"name":"nemaline myopathy 3, with intranuclear rods","type":"related"},{"name":"nemaline myopathy caused by mutation in ACTA1","type":"exact"},{"name":"nemaline myopathy type 3","type":"exact"}],"termid":"MONDO:0008070","terms_by_termid":{"MONDO:0008070":null},"xrefs":{"Monarch":{"xref_id":"0008070"}}}


id: PBO:0075637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2G","termid":"PBO:0075637"}


id: MONDO:0004577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Area of epithelial tissue loss from corneal surface; associated with inflammatory cells in the cornea and anterior chamber.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis","termid":"MONDO:0003085"},{"relation_name":"is_a","term_name":"ulcer disease","termid":"MONDO:0043839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal ulcer","secondary_identifiers":["icd11.foundation:2089700977","NCIT:C50515","HP:0200020","ICD9:370.0","ICD9:370.00","MESH:D003320","MEDGEN:40486","ICD10CM:H16.0","SCTID:91514001","DOID:8463","UMLS:C0010043"],"synonyms":[{"name":"Ulcer, corneal","type":"exact"},{"name":"cornea ulcer disease","type":"exact"},{"name":"ulcer disease of cornea","type":"exact"}],"termid":"MONDO:0004577","xrefs":{"Monarch":{"xref_id":"0004577"}}}


id: GO:1900760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sterigmatocystin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sterigmatocystin biosynthetic process","termid":"GO:0010913"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"negatively_regulates","term_name":"sterigmatocystin biosynthetic process","termid":"GO:0045461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of sterigmatocystin biosynthetic process","synonyms":[{"name":"down regulation of sterigmatocystin anabolism","type":"exact"},{"name":"down regulation of sterigmatocystin biosynthesis","type":"exact"},{"name":"down regulation of sterigmatocystin biosynthetic process","type":"exact"},{"name":"down regulation of sterigmatocystin formation","type":"exact"},{"name":"down regulation of sterigmatocystin synthesis","type":"exact"},{"name":"down-regulation of sterigmatocystin anabolism","type":"exact"},{"name":"down-regulation of sterigmatocystin biosynthesis","type":"exact"},{"name":"down-regulation of sterigmatocystin biosynthetic process","type":"exact"},{"name":"down-regulation of sterigmatocystin formation","type":"exact"},{"name":"down-regulation of sterigmatocystin synthesis","type":"exact"},{"name":"downregulation of sterigmatocystin anabolism","type":"exact"},{"name":"downregulation of sterigmatocystin biosynthesis","type":"exact"},{"name":"downregulation of sterigmatocystin biosynthetic process","type":"exact"},{"name":"downregulation of sterigmatocystin formation","type":"exact"},{"name":"downregulation of sterigmatocystin synthesis","type":"exact"},{"name":"inhibition of sterigmatocystin anabolism","type":"exact"},{"name":"inhibition of sterigmatocystin biosynthesis","type":"exact"},{"name":"inhibition of sterigmatocystin biosynthetic process","type":"narrow"},{"name":"inhibition of sterigmatocystin formation","type":"exact"},{"name":"inhibition of sterigmatocystin synthesis","type":"exact"},{"name":"negative regulation of sterigmatocystin anabolism","type":"exact"},{"name":"negative regulation of sterigmatocystin biosynthesis","type":"exact"},{"name":"negative regulation of sterigmatocystin formation","type":"exact"},{"name":"negative regulation of sterigmatocystin synthesis","type":"exact"}],"termid":"GO:1900760"}


id: GO:0006796
data:
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id: MONDO:0015058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Waterhouse-Friderichsen syndrome (obsolete MONDO:0015058)","termid":"MONDO:0015058","xrefs":{"Monarch":{"xref_id":"0015058"}}}


id: PBO:0041595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 6","termid":"PBO:0041595"}


id: PBO:0013025
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by vertebrate vCaM","termid":"PBO:0013025"}


id: GO:0061438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the renal system vasculature is generated and organized. Morphogenesis pertains to the creation of form.","definition_xrefs":["PMID:11891195","GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"renal system vasculature development","termid":"GO:0061437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system vasculature morphogenesis","termid":"GO:0061438"}


id: FYPO:0003332
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein kinase activity","termid":"FYPO:0003075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal protein kinase activity during mitotic interphase","termid":"FYPO:0003332"}


id: PBO:0085211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxysterol-binding phosphatidylserine transferase; part of family with seven members in S. cerevisiae; family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; OSH7 has a paralog, OSH6, that arose from the whole genome duplication","termid":"PBO:0085211"}


id: MONDO:0000666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An agnosia that is a loss of the ability to recognize visual scenes or classes of objects but retain the ability to describe them.","definition_xrefs":["DOID:0060136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual agnosia","termid":"MONDO:0000685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"associative visual agnosia","synonyms":[{"name":"associative agnosia","type":"related"}],"termid":"MONDO:0000666","xrefs":{"Monarch":{"xref_id":"0000666"}}}


id: PBO:0030627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_upon_nitrogen_starvation","termid":"PBO:0030627"}


id: PBO:0012531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_determination_of","termid":"PBO:0012531"}


id: FYPO:0006118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 5-fluoroorotic acid (5-FOA). Cells stop growing (and may die) at a concentration of 5-FOA that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to 5-fluoroorotic acid","synonyms":[{"name":"hypersensitive to 5-fluoroorotic acid","type":"exact"},{"name":"sensitive to 5-FOA","type":"exact"},{"name":"sensitive to 5-fluoroorotic acid during mitotic cell cycle","type":"related"},{"name":"sensitive to 5-fluoroorotic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0006118"}


id: PBO:0035909
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_centromere_during_vegetative_growth","termid":"PBO:0035909"}


id: MONDO:1012488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ACTH-independent adrenal Cushing syndrome, non-human animal","termid":"MONDO:1011681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTH-independent adrenal Cushing syndrome, dog","secondary_identifiers":["OMIA:001937-9615"],"termid":"MONDO:1012488","xrefs":{"Monarch":{"xref_id":"1012488"}}}


id: PBO:0016513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_upstream_of","termid":"PBO:0016513"}


id: PBO:0002457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec10","termid":"PBO:0002457"}


id: GO:0051864
data:
  {"annotated_genes":["SJAG_03286","SJAG_03041","SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70805,87714],"is_not":false,"summary":null,"term":"GO:0051864"},{"annotations":[67234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a modified lysine residue at position 36 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["PMID:16362057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03041":null,"SJAG_03286":null,"SJAG_03664":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0032452","GO:0140096","GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"histone H3K36 demethylase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K36 demethylase activity","type":"exact"},{"name":"histone H3-lysine-36 demethylase activity","type":"exact"},{"name":"histone H3-methyl-lysine-36 demethylase activity","type":"exact"},{"name":"histone demethylase activity (H3-K36 specific)","type":"exact"},{"name":"[histone-H3]-lysine-36 demethylase activity","type":"exact"},{"name":"histone-lysine (H3-K36) demethylase activity","type":"exact"},{"name":"histone-lysine demethylase activity (H3-K36 specific)","type":"exact"},{"name":"histone-lysine(H3-K36) demethylase activity","type":"exact"}],"termid":"GO:0051864","terms_by_termid":{"GO:0051864":null,"GO:0140680":null}}


id: PBO:0044852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 133 (pseudogene)","termid":"PBO:0044852"}


id: PBO:0050334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 36","termid":"PBO:0050334"}


id: PBO:0047130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 170 member B","termid":"PBO:0047130"}


id: MONDO:0004215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anthrax disease that results in infection located in skin, has material basis in Bacillus anthracis, which is transmitted by contact with infected animals or animal products. The infection has symptom skin lesion that eventually forms an ulcer with a black center.","definition_xrefs":["DOID:7426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anthrax infection","termid":"MONDO:0005119"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous anthrax","secondary_identifiers":["SCTID:84980006","UMLS:C0003177","icd11.foundation:2057984300","MESH:C531621","MEDGEN:1959","ICD10CM:A22.0","ICD9:022.0"],"synonyms":[{"name":"anthrax, skin type","type":"related"},{"name":"skin anthrax","type":"related"}],"termid":"MONDO:0004215","xrefs":{"Monarch":{"xref_id":"0004215"}}}


id: SO:0001793
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read from an end of the clone sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"},{"relation_name":"part_of","term_name":"clone","termid":"SO:0000151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clone_end","synonyms":[{"name":"clone end","type":"exact"}],"termid":"SO:0001793"}


id: MONDO:0009331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated hemihyperplasia is a rare overgrowth syndrome characterized by an asymmetric regional body overgrowth, involving at least one limb, and associated with an increased risk of developing embryonal tumors, principally nephroblastoma and hepoblastoma.","definition_xrefs":["Orphanet:2128"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"macroglossia","termid":"MONDO:0015496"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated hemihyperplasia","secondary_identifiers":["GARD:2630","OMIM:235000","MEDGEN:383853","MESH:C565524","UMLS:C1856184","MedDRA:10019463"],"synonyms":[{"name":"Hemicorporal hypertrophy","type":"exact"},{"name":"IH","type":"related"},{"name":"hemi 3 syndrome","type":"exact"},{"name":"hemi-3 syndrome","type":"related"},{"name":"hemihyperplasia","type":"related"},{"name":"hemihyperplasia, isolated","type":"related"},{"name":"hemihypertrophy","type":"exact"},{"name":"hemihypertrophy, isolated","type":"related"},{"name":"isolated hemihypertrophy","type":"exact"}],"termid":"MONDO:0009331","xrefs":{"Monarch":{"xref_id":"0009331"}}}


id: MONDO:0014416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Cushing syndrome due to macronodular adrenal hyperplasia in which the cause of the disease is a mutation in the ARMC5 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cushing syndrome due to macronodular adrenal hyperplasia","termid":"MONDO:0009049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTH-independent macronodular adrenal hyperplasia 2","secondary_identifiers":["UMLS:C4014803","MEDGEN:863240","DOID:0111624","GARD:16034","OMIM:615954"],"synonyms":[{"name":"ACTH-independent macronodular adrenal hyperplasia 2","type":"exact"},{"name":"ACTH-independent macronodular adrenal hyperplasia 2, autosomal dominant, somatic mutation","type":"exact"},{"name":"ACTH-independent macronodular adrenal hyperplasia type 2","type":"exact"},{"name":"AIMAH2","type":"related"},{"name":"ARMC5 Cushing syndrome due to macronodular adrenal hyperplasia","type":"exact"},{"name":"Cushing syndrome due to macronodular adrenal hyperplasia caused by mutation in ARMC5","type":"exact"},{"name":"primary macronodular adrenal hyperplasia","type":"related"}],"termid":"MONDO:0014416","xrefs":{"Monarch":{"xref_id":"0014416"}}}


id: MONDO:1010604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypothyroidism that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism, non-human animal","termid":"MONDO:1010057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypothyroidism, horse","secondary_identifiers":["OMIA:000536-9796"],"termid":"MONDO:1010604","xrefs":{"Monarch":{"xref_id":"1010604"}}}


id: MONDO:0008229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroneal nerve, accessory deep","secondary_identifiers":["OMIM:170980","UMLS:C1868426","MESH:C536001","MEDGEN:358317"],"synonyms":[{"name":"accessory deep peroneal nerve","type":"related"},{"name":"peroneal nerve, accessory deep","type":"exact"}],"termid":"MONDO:0008229","xrefs":{"Monarch":{"xref_id":"0008229"}}}


id: PBO:0030197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_brefeldin_A","termid":"PBO:0030197"}


id: FYECO:0000242
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which rapamycin was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ rapamycin","synonyms":[{"name":"+ sirolimus","type":"exact"}],"termid":"FYECO:0000242"}


id: MONDO:0017240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acrodysostosis with multiple hormone resistance (obsolete MONDO:0017240)","secondary_identifiers":["Orphanet:280651"],"termid":"MONDO:0017240","xrefs":{"Monarch":{"xref_id":"0017240"}}}


id: GO:1901075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of engulfment of apoptotic cell.","definition_xrefs":["PMID:19402756","GO:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phagocytosis, engulfment","termid":"GO:0060101"},{"relation_name":"is_a","term_name":"regulation of engulfment of apoptotic cell","termid":"GO:1901074"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic cell clearance","termid":"GO:2000426"},{"relation_name":"negatively_regulates","term_name":"engulfment of apoptotic cell","termid":"GO:0043652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of engulfment of apoptotic cell","synonyms":[{"name":"down regulation of engulfment of apoptotic cell","type":"exact"},{"name":"down regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"down regulation of engulfment of cell corpse","type":"exact"},{"name":"down-regulation of engulfment of apoptotic cell","type":"exact"},{"name":"down-regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"down-regulation of engulfment of cell corpse","type":"exact"},{"name":"downregulation of engulfment of apoptotic cell","type":"exact"},{"name":"downregulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"downregulation of engulfment of cell corpse","type":"exact"},{"name":"inhibition of engulfment of apoptotic cell","type":"narrow"},{"name":"inhibition of engulfment of apoptotic cell corpse","type":"narrow"},{"name":"inhibition of engulfment of cell corpse","type":"narrow"},{"name":"negative regulation of engulfment of apoptotic cell corpse","type":"exact"},{"name":"negative regulation of engulfment of cell corpse","type":"exact"}],"termid":"GO:1901075"}


id: GO:1903715
data:
  {"annotated_genes":["SJAG_02592","SJAG_01062","SJAG_00698","SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94707,97957,110060,112258],"is_not":false,"summary":null,"term":"GO:1903715"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aerobic respiration.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19266076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"regulates","term_name":"aerobic respiration","termid":"GO:0009060"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00698":null,"SJAG_01062":null,"SJAG_02433":null,"SJAG_02592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of aerobic respiration","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903715","terms_by_termid":{"GO:1903715":null}}


id: MONDO:1012816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inborn error of lipid metabolism characterized by stunted postnatal growth, steatorrhea, abdominal distension and wiry coat that occurs in dogs due to a mutation in the ACSL5 gene.","definition_xrefs":["PMID:33106515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipid malabsorption, ACSL5-related, dog","secondary_identifiers":["OMIA:002226-9615"],"termid":"MONDO:1012816","xrefs":{"Monarch":{"xref_id":"1012816"}}}


id: MONDO:0026763
data:
  {"annotated_genes":["SJAG_03418","SJAG_03698"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86225,86226],"is_not":false,"summary":null,"term":"MONDO:0026763"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03418":null,"SJAG_03698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 13, X-linked","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:301043","UMLS:C5393308","MEDGEN:1714826","DOID:0060954"],"synonyms":[{"name":"HOLOPROSENCEPHALY 13, X-LINKED","type":"related"},{"name":"HPE13","type":"related"},{"name":"holoprosencephaly 13, X-linked, X-linked recessive, X-linked dominant","type":"exact"}],"termid":"MONDO:0026763","terms_by_termid":{"MONDO:0026763":null},"xrefs":{"Monarch":{"xref_id":"0026763"}}}


id: PBO:0090321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome 3'-5' exoribonuclease subunit Rrp6","termid":"PBO:0090321"}


id: PBO:0071112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 114","termid":"PBO:0071112"}


id: MONDO:0003249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal malignant growth of the cells that comprise the pineal parenchyma.","definition_xrefs":["NCIT:C3573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thalamic cancer","termid":"MONDO:0003766"},{"relation_name":"is_a","term_name":"malignant endocrine neoplasm","termid":"MONDO:0021069"},{"relation_name":"is_a","term_name":"pineal body neoplasm","termid":"MONDO:0021232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pineal gland cancer","secondary_identifiers":["NCIT:C6965","UMLS:C0153655","SCTID:363483004","DOID:5032","ICD9:194.4","MEDGEN:102284"],"synonyms":[{"name":"cancer of pineal body","type":"exact"},{"name":"malignant neoplasm of pineal body","type":"exact"},{"name":"malignant neoplasm of pineal gland","type":"exact"},{"name":"malignant neoplasm of the pineal gland","type":"exact"},{"name":"malignant pineal area neoplasm","type":"exact"},{"name":"malignant pineal area tumor","type":"exact"},{"name":"malignant pineal area tumour","type":"exact"},{"name":"malignant pineal body neoplasm","type":"exact"},{"name":"malignant pineal gland neoplasm","type":"exact"},{"name":"malignant pineal gland tumor","type":"exact"},{"name":"malignant pineal gland tumour","type":"exact"},{"name":"malignant pineal region neoplasm","type":"exact"},{"name":"malignant pineal region tumor","type":"exact"},{"name":"malignant pineal region tumour","type":"exact"},{"name":"malignant tumor of pineal gland","type":"exact"},{"name":"malignant tumor of the pineal gland","type":"exact"},{"name":"malignant tumour of pineal gland","type":"exact"},{"name":"malignant tumour of the pineal gland","type":"exact"},{"name":"neoplasm of the pineal region","type":"broad"},{"name":"pineal body cancer","type":"exact"},{"name":"pinealoma","type":"related"},{"name":"pineocytic tumor","type":"broad"},{"name":"pineocytic tumour","type":"broad"},{"name":"tumor of the pineal region","type":"broad"},{"name":"tumour of the pineal region","type":"broad"}],"termid":"MONDO:0003249","xrefs":{"Monarch":{"xref_id":"0003249"}}}


id: PBO:0076743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 11 family, X-linked 3, pseudogene","termid":"PBO:0076743"}


id: MONDO:0010571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe form of otopalatodigital syndrome spectrum disorder, and is characterized by dysmorphic facies, severe skeletal dysplasia affecting the axial and appendicular skeleton, extraskeletal anomalies (including malformations of the brain, heart, genitourinary system, and intestine) and poor survival.","definition_xrefs":["Orphanet:90652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otopalatodigital syndrome","termid":"MONDO:0019027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopalatodigital syndrome type 2","secondary_identifiers":["UMLS:C1844696","SCTID:42432003","MESH:C538089","ICD9:759.89","MEDGEN:337064","icd11.foundation:1897308206","OMIM:304120","DOID:0111784","GARD:5802"],"synonyms":[{"name":"Andre syndrome","type":"related"},{"name":"FPO","type":"related"},{"name":"OPD 2 syndrome","type":"exact"},{"name":"OPD II syndrome","type":"exact"},{"name":"OPD syndrome 2","type":"exact"},{"name":"OPD2","type":"related"},{"name":"Otopalatodigital Syndrome Type I and II","type":"exact"},{"name":"cranio-oro-digital syndrome","type":"related"},{"name":"cranioorodigital syndrome","type":"related"},{"name":"faciopalatoosseous syndrome","type":"related"},{"name":"oto-palato-digital syndrome type 2","type":"related"},{"name":"otopalatodigital syndrome, type 2","type":"related"},{"name":"otopalatodigital syndrome, type II","type":"related"},{"name":"otopalatodigital syndrome, type II, X-linked dominant","type":"exact"}],"termid":"MONDO:0010571","xrefs":{"Monarch":{"xref_id":"0010571"}}}


id: PBO:0086891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane protein involved in export of ammonia; ammonia is a starvation signal that promotes cell death in aging colonies; phosphorylated in mitochondria; member of the TC 9.B.33 YaaH family; homolog of Y. lipolytica Gpr1p; ATO2 has a paralog, ADY2, that arose from the whole genome duplication","termid":"PBO:0086891"}


id: GO:0005729
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasmid commonly found in Saccharomyces, inherited in a non-Mendelian manner and often present in 100-400 copies.","definition_xrefs":["PMID:12073320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrachromosomal circular DNA","termid":"GO:0005727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"2-micrometer circle DNA","termid":"GO:0005729"}


id: PBO:0057574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 770","termid":"PBO:0057574"}


id: MONDO:0024880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor that has spread from its original (primary) site of growth to another site close to or distant from the primary site.","definition_xrefs":["NCIT:C36263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary malignant neoplasm","termid":"MONDO:0024881"},{"relation_name":"is_a","term_name":"metastatic neoplasm","termid":"MONDO:0024883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"metastatic malignant neoplasm","secondary_identifiers":["MEDGEN:422475","UMLS:C2939419"],"synonyms":[{"name":"malignant metastatic neoplasm","type":"exact"},{"name":"metastatic cancer","type":"exact"},{"name":"metastatic malignant neoplasm","type":"exact"},{"name":"metastatic neoplasm, malignant","type":"exact"}],"termid":"MONDO:0024880","xrefs":{"Monarch":{"xref_id":"0024880"}}}


id: MONDO:0015781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Facial dysmorphism-shawl scrotum-joint laxity syndrome is characterized by facial dysmorphism (hypertelorism, telecanthus, downslanting palpebral fissures, ptosis, malar hypoplasia, broad nasal bridge, thin upper lip, smooth philtrum, and low-set prominent ears) and associated with joint anomalies (genu valgum or cubitus valgus, hyper-extensible joints, etc.). It has been described in two patients (a mother and her son). The boy also had hypoplastic shawl scrotum and cryptorchidism, and the mother had mild intellectual deficit.","definition_xrefs":["Orphanet:1778"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial dysmorphism-shawl scrotum-joint laxity syndrome","secondary_identifiers":["UMLS:C2931522","MESH:C537529","GARD:4778","SCTID:716337006","MEDGEN:419099"],"synonyms":[{"name":"Seaver Cassidy syndrome","type":"related"},{"name":"Seaver-Cassidy syndrome","type":"exact"},{"name":"facial dysmorphism shawl scrotum joint laxity","type":"related"},{"name":"hypertelorism, downslanting palpebral fissures, malar hypoplasia, and apparently low-set ears associated with joint and scrotal anomalies","type":"related"}],"termid":"MONDO:0015781","xrefs":{"Monarch":{"xref_id":"0015781"}}}


id: PBO:0043188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2","termid":"PBO:0043188"}


id: FYPO:0007771
data:
  {"alleles_by_uniquename":{"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119994],"is_not":false,"summary":null,"term":"FYPO:0007771"}],"single_locus_phenotype":[{"annotations":[119969,119970,119976,119977,119979,119980,119993,119995,119996,119997,119998,119999,120000],"is_not":false,"summary":null,"term":"FYPO:0007771"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein is abnormally localized to one or more large clusters in the nuclear envelope. The protein may normally be distributed evenly in the nuclear envelope.","definition_xrefs":["PomBase:mah","PMID:32109380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear envelope during vegetative growth","termid":"FYPO:0004885"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":7,"genotypes_by_uniquename":{"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"Vps4-EQ(E233Q aa)","display_uniquename":"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-2","expression":"Not assayed or wild type"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cmp7delta vps4-ts(I307T L327S aa)","display_uniquename":"cmp7delta__vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"did4delta":{"display_name":"did4delta","display_uniquename":"did4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04489:allele-1","expression":"Null"}]}]},"vps24delta":{"display_name":"vps24delta","display_uniquename":"vps24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03783:allele-1","expression":"Null"}]}]},"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"vps4-ts(I307T L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_05207","SJAG_03892"],"name":"abnormally clustered protein localization to nuclear envelope","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_05207","SJAG_03783","SJAG_03892","SJAG_04489"],"single_locus_genotype_uniquenames":["vps4delta","Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","vps24delta","did4delta","cmp7delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal protein localization to nuclear envelope, with protein in large clusters","type":"exact"},{"name":"abnormally clustered protein localisation to nuclear envelope","type":"exact"},{"name":"abnormally clustered protein localization to nuclear envelope during mitotic cell cycle","type":"related"},{"name":"abnormally clustered protein localization to nuclear envelope during vegetative growth","type":"exact"},{"name":"abnormally clustered protein localization to nuclear membrane","type":"related"}],"termid":"FYPO:0007771","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007771":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: FYPO:0004839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the localization of a protein to the plasma membrane is abolished when the cell is subject to glucose starvation, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"},{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane","termid":"FYPO:0004838"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose starvation","synonyms":[{"name":"abolished protein localisation to plasma membrane, with protein mislocalised to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization in plasma membrane, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization to cell membrane, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose depletion","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose deprivation","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose limitation","type":"related"},{"name":"protein localization to plasma membrane abolished, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"}],"termid":"FYPO:0004839"}


id: GO:0062157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-containing complex that is capable of the ATP-dependent diffusion of a potassium ion across the mitochondrial inner membrane.","definition_xrefs":["PMID:31435016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel complex","termid":"GO:0034705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mitochondrial ATP-gated potassium channel complex","termid":"GO:0062157"}


id: GO:0099180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of Zn2+ ions from the cytoplasm into the lumen of a cytoplasmic vesicle.","definition_xrefs":["PMID:9990090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"zinc ion import into synaptic vesicle","synonyms":[{"name":"Zn2+ import into synaptic vesicle","type":"exact"},{"name":"zinc import into synaptic vesicle","type":"exact"}],"termid":"GO:0099180"}


