# terms

id: PBO:0076713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 19","termid":"PBO:0076713"}


id: PATO:0000108
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000108 salt sensitivity (obsolete PATO:0000108)","termid":"PATO:0000108"}


id: GO:0098677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maturation of a virion after separation from the host cell. Not all viruses mature after separation. In those that do, maturation typically involves rearangement and/or cleavage of viral proteins, resulting in the virion becoming competent for reinfection.","definition_xrefs":["ISBN:0781718325","VZ:1946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virus maturation","termid":"GO:0019075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virion maturation","synonyms":[{"name":"viral particle maturation","type":"exact"},{"name":"virus particle maturation","type":"related"}],"termid":"GO:0098677"}


id: MONDO:0013016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukocyte adhesion deficiency type III (LAD-III) is a form of LAD characterized by both severe bacterial infections and a severe bleeding disorder.","definition_xrefs":["Orphanet:99844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion deficiency","termid":"MONDO:0017570"},{"relation_name":"is_a","term_name":"autosomal recessive osteopetrosis","termid":"MONDO:0019026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0006025","MONDO:0005046","MONDO:0005328"],"is_obsolete":false,"name":"leukocyte adhesion deficiency 3","secondary_identifiers":["GARD:16915","MESH:C567555","MEDGEN:411605","UMLS:C2748536","DOID:0110912","OMIM:612840"],"synonyms":[{"name":"FERMT3 leukocyte adhesion deficiency","type":"exact"},{"name":"IADD","type":"exact"},{"name":"LAD-III","type":"exact"},{"name":"LAD1 variant","type":"exact"},{"name":"LAD1V","type":"exact"},{"name":"LAD3","type":"exact"},{"name":"integrin Activation deficiency disease","type":"related"},{"name":"integrin activation deficiency disease","type":"exact"},{"name":"lad-1 variant","type":"exact"},{"name":"lad-III","type":"exact"},{"name":"leukocyte adhesion deficiency 1 variant","type":"exact"},{"name":"leukocyte adhesion deficiency 3","type":"exact"},{"name":"leukocyte adhesion deficiency caused by mutation in FERMT3","type":"exact"},{"name":"leukocyte adhesion deficiency type 3","type":"exact"},{"name":"leukocyte adhesion deficiency type III","type":"exact"},{"name":"leukocyte adhesion deficiency, type 3","type":"related"},{"name":"leukocyte adhesion deficiency, type III","type":"related"},{"name":"leukocyte adhesion deficiency-1 variant","type":"exact"}],"termid":"MONDO:0013016","xrefs":{"Monarch":{"xref_id":"0013016"}}}


id: PBO:0072411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 16","termid":"PBO:0072411"}


id: MONDO:0022712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculo digital syndrome","secondary_identifiers":["UMLS:C2931063","MEDGEN:419324","MESH:C535922"],"synonyms":[{"name":"Chemke Oliver Mallek syndrome","type":"related"},{"name":"Chemke-Oliver-Mallek syndrome","type":"related"},{"name":"multiple ophthalmic anomalies and digital hypoplasia","type":"related"}],"termid":"MONDO:0022712","xrefs":{"Monarch":{"xref_id":"0022712"}}}


id: MONDO:0029014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare systemic or rheumatological disease of childhood (obsolete MONDO:0029014)","secondary_identifiers":["Orphanet:280342"],"termid":"MONDO:0029014","xrefs":{"Monarch":{"xref_id":"0029014"}}}


id: PBO:0086586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; epitope-tagged protein localizes to the cytoplasm","termid":"PBO:0086586"}


id: PBO:0086257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates expression of Fo-F1 ATP synthase subunits; involved in the regulation of mitochondrial expression of subunits 6 (Atp6p) and 8 (Atp8p) of the Fo-F1 ATP synthase; functions with Nca3p","termid":"PBO:0086257"}


id: PBO:0039833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 1","termid":"PBO:0039833"}


id: GO:0033618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form respiratory chain complex IV (also known as cytochrome c oxidase) in the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex IV assembly","termid":"GO:0008535"},{"relation_name":"part_of","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0061024","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"plasma membrane respiratory chain complex IV assembly","synonyms":[{"name":"plasma membrane cytochrome c oxidase biogenesis","type":"broad"},{"name":"plasma membrane cytochrome c oxidase complex assembly","type":"exact"}],"termid":"GO:0033618"}


id: PBO:0061474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal cell adhesion molecule","termid":"PBO:0061474"}


id: PBO:0029809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_germinated_spores_with_elongated_germ_tubes_and_cells_with_normal_morphology_(obsolete_FYPO:0002428)","termid":"PBO:0029809"}


id: PBO:0018151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XRCC4-like nonhomologous end joining factor, Cernunnon Xlf1/Nej1","termid":"PBO:0018151"}


id: GO:0035342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of inosine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of purine nucleoside transport","termid":"GO:0032248"},{"relation_name":"is_a","term_name":"regulation of inosine transport","termid":"GO:0035341"},{"relation_name":"positively_regulates","term_name":"inosine transport","termid":"GO:0035340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of inosine transport","synonyms":[{"name":"positive regulation of hypoxanthine riboside transport","type":"exact"}],"termid":"GO:0035342"}


id: MONDO:0007579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete esterase C (obsolete MONDO:0007579)","secondary_identifiers":["OMIM:133270"],"synonyms":[{"name":"ESC","type":"related"},{"name":"esterase C","type":"exact"},{"name":"esterase type C","type":"exact"}],"termid":"MONDO:0007579","xrefs":{"Monarch":{"xref_id":"0007579"}}}


id: MONDO:0019372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A solitary bone cyst is a benign non-epithelial bone cavity that is asymptomatic and that is found most commonly in the second decade of life by chance. The long bones are most often affected, but cases involving the jaw bone have been reported.","definition_xrefs":["Orphanet:83468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solitary bone cyst","secondary_identifiers":["UMLS:C0005937","SCTID:203467005","NCIT:C2904","MEDGEN:2696","ICD10CM:M85.4","MESH:D001845","GARD:19039","icd11.foundation:987501456","ICD9:733.21"],"synonyms":[{"name":"bone cyst","type":"exact"},{"name":"cyst of bone","type":"exact"},{"name":"cyst of the bone","type":"exact"},{"name":"simple bone cyst","type":"exact"},{"name":"solitary cyst","type":"exact"},{"name":"unicameral bone cyst","type":"exact"}],"termid":"MONDO:0019372","xrefs":{"Monarch":{"xref_id":"0019372"}}}


id: GO:0098981
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that uses acetylcholine as a neurotransmitter.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cholinergic synapse","termid":"GO:0098981"}


id: GO:0038107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by a nodal protein binding of to an activin receptor on the surface of a target cell, which contributes to the establishment of an organism's body plan or part of an organism with respect to the left and right halves.","definition_xrefs":["PMID:20413706","GOC:vk","PMID:12857784","GOC:BHF","PMID:17287255"],"gene_count":0,"genotype_count":0,"name":"obsolete nodal signaling pathway involved in determination of left/right asymmetry (obsolete GO:0038107)","synonyms":[{"name":"nodal signalling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter by nodal signaling pathway, involved in determination of left/right symmetry","type":"exact"}],"termid":"GO:0038107"}


id: SO:0002055
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant whereby the gene product is not functional or the gene product is not produced.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"null_mutation","synonyms":[{"name":"null mutation","type":"exact"}],"termid":"SO:0002055"}


id: PBO:0085029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoyl transferase; catalyzes the cotranslational, covalent attachment of myristic acid to the N-terminal glycine residue of several proteins involved in cellular growth and signal transduction","termid":"PBO:0085029"}


id: PBO:0078686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 1-2","termid":"PBO:0078686"}


id: GO:2000090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesonephric glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in mesonephros development","termid":"GO:2000606"},{"relation_name":"regulates","term_name":"mesonephric glomerular mesangial cell proliferation involved in mesonephros development","termid":"GO:0061269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesonephric glomerular mesangial cell proliferation","termid":"GO:2000090"}


id: GO:0070738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the posttranslational transfer of one or more glycine residues to a specific glutamate residue on a target tubulin molecule; acts on alpha or beta tubulin.","definition_xrefs":["PMID:19524510","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glycine ligase activity","termid":"GO:0070735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"tubulin-glycine ligase activity","synonyms":[{"name":"tubulin glycylase activity","type":"exact"}],"termid":"GO:0070738"}


id: PBO:0073817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 18","termid":"PBO:0073817"}


id: PBO:0079445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUB like protein 3","termid":"PBO:0079445"}


id: MONDO:1010412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, non-human animal","termid":"MONDO:1010001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, domestic cat","secondary_identifiers":["OMIA:000344-9685"],"termid":"MONDO:1010412","xrefs":{"Monarch":{"xref_id":"1010412"}}}


id: GO:1900688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gerfelin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of gerfelin biosynthetic process","termid":"GO:1900686"},{"relation_name":"positively_regulates","term_name":"gerfelin biosynthetic process","termid":"GO:1900578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of gerfelin biosynthetic process","synonyms":[{"name":"activation of gerfelin anabolism","type":"exact"},{"name":"activation of gerfelin biosynthesis","type":"exact"},{"name":"activation of gerfelin biosynthetic process","type":"narrow"},{"name":"activation of gerfelin formation","type":"exact"},{"name":"activation of gerfelin synthesis","type":"exact"},{"name":"positive regulation of gerfelin anabolism","type":"exact"},{"name":"positive regulation of gerfelin biosynthesis","type":"exact"},{"name":"positive regulation of gerfelin formation","type":"exact"},{"name":"positive regulation of gerfelin synthesis","type":"exact"},{"name":"up regulation of gerfelin anabolism","type":"exact"},{"name":"up regulation of gerfelin biosynthesis","type":"exact"},{"name":"up regulation of gerfelin biosynthetic process","type":"exact"},{"name":"up regulation of gerfelin formation","type":"exact"},{"name":"up regulation of gerfelin synthesis","type":"exact"},{"name":"up-regulation of gerfelin anabolism","type":"exact"},{"name":"up-regulation of gerfelin biosynthesis","type":"exact"},{"name":"up-regulation of gerfelin biosynthetic process","type":"exact"},{"name":"up-regulation of gerfelin formation","type":"exact"},{"name":"up-regulation of gerfelin synthesis","type":"exact"},{"name":"upregulation of gerfelin anabolism","type":"exact"},{"name":"upregulation of gerfelin biosynthesis","type":"exact"},{"name":"upregulation of gerfelin biosynthetic process","type":"exact"},{"name":"upregulation of gerfelin formation","type":"exact"},{"name":"upregulation of gerfelin synthesis","type":"exact"}],"termid":"GO:1900688"}


id: GO:0033028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a myeloid cell, a cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage.","definition_xrefs":["PMID:17133093","CL:0000763","GOC:mtg_apoptosis","PMID:11292031","GOC:add","PMID:15330259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid cell apoptotic process","synonyms":[{"name":"apoptosis of myeloid cells","type":"exact"},{"name":"myeloid cell apoptosis","type":"narrow"}],"termid":"GO:0033028"}


id: MOD:01191
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:12766232","Unimod:211#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-ethyl iodoacetamide-d0","termid":"MOD:00561"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethyl iodoacetamide-d0 - site C","synonyms":[{"name":"N-ethyl iodoacetamide-d0","type":"related"},{"name":"NEIAA","type":"related"}],"termid":"MOD:01191"}


id: PBO:0004147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human mitofilin ortholog (predicted)","termid":"PBO:0004147"}


id: PBO:0051633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner mitochondrial membrane peptidase subunit 1 pseudogene 3","termid":"PBO:0051633"}


id: PBO:0116585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase","termid":"PBO:0116585"}


id: PBO:0114107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane DUF2015 family conserved fungal protein","termid":"PBO:0114107"}


id: PBO:0045812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 2","termid":"PBO:0045812"}


id: GO:0052923
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7 isopentenyl diphosphate + (2E)-geranyl diphosphate = all-trans-nonaprenyl diphosphate + 7 diphosphate.","definition_xrefs":["RHEA:27563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity","secondary_identifiers":["GO:0050347","EC:2.5.1.84","KEGG_REACTION:R07267","MetaCyc:TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN","KEGG_REACTION:R09250"],"synonyms":[{"name":"(E)-octaprenyl-diphosphate:isopentenyl-diphosphate octaprenyltranstransferase activity","type":"related"},{"name":"SPP synthase activity","type":"broad"},{"name":"SPP-synthase activity","type":"broad"},{"name":"all-trans-nonaprenyl-diphosphate synthase activity","type":"related"},{"name":"nonaprenyl diphosphate synthase activity","type":"broad"},{"name":"nonaprenyl pyrophosphate synthetase activity","type":"related"},{"name":"polyprenylpyrophosphate synthetase activity","type":"related"},{"name":"solPP synthase activity","type":"broad"},{"name":"solanesyl diphosphate synthetase activity","type":"broad"},{"name":"solanesyl pyrophosphate synthetase activity","type":"related"},{"name":"solanesyl-diphosphate synthase activity","type":"related"},{"name":"terpenoidallyltransferase activity","type":"related"},{"name":"terpenyl pyrophosphate synthetase activity","type":"related"},{"name":"trans-octaprenyltranstransferase activity","type":"related"},{"name":"trans-prenyltransferase activity","type":"related"}],"termid":"GO:0052923"}


id: PBO:0038731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 2, smooth muscle","termid":"PBO:0038731"}


id: GO:0030835
data:
  {"annotated_genes":["SJAG_00279","SJAG_01993","SJAG_02700","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92654,80536,76055,79503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of actin depolymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament depolymerization","termid":"GO:0030834"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"negative regulation of protein depolymerization","termid":"GO:1901880"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"negatively_regulates","term_name":"actin filament depolymerization","termid":"GO:0030042"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"negative regulation of actin filament depolymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030044"],"synonyms":[{"name":"actin filament stabilization","type":"exact"},{"name":"down regulation of actin filament depolymerization","type":"exact"},{"name":"down-regulation of actin filament depolymerization","type":"exact"},{"name":"downregulation of actin filament depolymerization","type":"exact"},{"name":"inhibition of actin filament depolymerization","type":"narrow"},{"name":"negative regulation of actin depolymerization","type":"exact"},{"name":"negative regulation of actin polymerization and/or depolymerization","type":"broad"}],"termid":"GO:0030835","terms_by_termid":{"GO:0051016":null}}


id: GO:0002931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a inadequate blood supply.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ischemia","termid":"GO:0002931"}


id: GO:0034375
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a high-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase, with the subsequent loss of free fatty acid, and the transfer of cholesterol esters from LDL to a triglyceride-rich lipoprotein particle by cholesteryl ester transfer protein (CETP), with the simultaneous transfer of triglyceride to LDL.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:expert_pt","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle remodeling","termid":"GO:0034369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"high-density lipoprotein particle remodeling","secondary_identifiers":["Reactome:R-HSA-8964058"],"synonyms":[{"name":"HDL remodeling","type":"exact"},{"name":"HDL remodelling","type":"exact"},{"name":"high-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0034375"}


id: GO:0000511
data:
  {"annotated_genes":["SJAG_02416","SJAG_02314","SJAG_03128","SJAG_02035","SJAG_00942"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98477,108471,111654,113991,117296],"is_not":false,"summary":null,"term":"GO:0000511"}]},"cv_name":"molecular_function","definition":"A histone chaperone that carries a H2A-H2B histone complex.","definition_xrefs":["PMID:28053344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone chaperone activity","termid":"GO:0140713"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00942":null,"SJAG_02035":null,"SJAG_02314":null,"SJAG_02416":null,"SJAG_03128":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140104","GO:0140597","GO:0003674"],"is_obsolete":false,"name":"H2A-H2B histone complex chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"H2A-H2B histone carrier activity","type":"exact"}],"termid":"GO:0000511","terms_by_termid":{"GO:0000511":null}}


id: PBO:0030261
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_antimycin_A","termid":"PBO:0030261"}


id: MONDO:0011192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the USH1C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 18A","secondary_identifiers":["DOID:0110473","MEDGEN:356389","MESH:C566580","GARD:22592","UMLS:C1865870","OMIM:602092"],"synonyms":[{"name":"DFNB18A","type":"narrow"},{"name":"USH1C autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 18A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 18A","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in USH1C","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 18A","type":"narrow"},{"name":"deafness, autosomal recessive 18","type":"narrow"},{"name":"deafness, autosomal recessive 18A","type":"narrow"},{"name":"deafness, autosomal recessive 18a","type":"narrow"},{"name":"deafness, autosomal recessive type 18A","type":"narrow"}],"termid":"MONDO:0011192","xrefs":{"Monarch":{"xref_id":"0011192"}}}


id: PBO:0046049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3E pseudogene 2","termid":"PBO:0046049"}


id: PR:Q09915
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription elongation factor SPT6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10145:SF1","OMA:SCHPO01747","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor spt6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.01c","secondary_identifiers":["UniProtKB:Q09915"],"synonyms":[{"name":"Spom972h-SUPT6H","type":"exact"},{"name":"chromatin elongation factor spt6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09915"}


id: GO:1904179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of adipose tissue development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23081848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of adipose tissue development","termid":"GO:1904177"},{"relation_name":"positively_regulates","term_name":"adipose tissue development","termid":"GO:0060612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adipose tissue development","synonyms":[{"name":"activation of adipogenesis","type":"related"},{"name":"activation of adipose tissue development","type":"narrow"},{"name":"positive regulation of adipogenesis","type":"related"},{"name":"up regulation of adipogenesis","type":"related"},{"name":"up regulation of adipose tissue development","type":"exact"},{"name":"up-regulation of adipogenesis","type":"related"},{"name":"up-regulation of adipose tissue development","type":"exact"},{"name":"upregulation of adipogenesis","type":"related"},{"name":"upregulation of adipose tissue development","type":"exact"}],"termid":"GO:1904179"}


id: MONDO:0018129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive cerebellar ataxia with late-onset spasticity is a rare, genetic neurodegenerative disease characterized by childhood or adolescent-onset of cerebellar ataxia with dysarthria which slowly progresses and associates pyramidal signs, including lower limb spasticity, brisk reflexes, and Babinski and Hoffman signs. Patients typically present cerebellar ataxia with development of increasing asymmetric spasticity in upper and lower limbs, and variable axonal sensory or sensorimotor neuropathy. Additional heterogeneous features, including pes cavus, scoliolis, and abnormalities of the brain (e.g. cerebral atrophy), may also be associated.","definition_xrefs":["Orphanet:352641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"},{"relation_name":"is_a","term_name":"autosomal recessive metabolic cerebellar ataxia","termid":"MONDO:0020044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025","MONDO:0005066","MONDO:0002525","MONDO:0002561"],"is_obsolete":false,"name":"autosomal recessive cerebellar ataxia with late-onset spasticity","secondary_identifiers":["UMLS:C4706412","MEDGEN:1635411","SCTID:763348005","GARD:21525"],"synonyms":[{"name":"autosomal recessive cerebellar ataxia due to GBA2 deficiency","type":"exact"}],"termid":"MONDO:0018129","xrefs":{"Monarch":{"xref_id":"0018129"}}}


id: MONDO:0002230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An embryonal neoplasm arising from the ovary with morphologic features resembling Wilms tumor of the kidney. It occurs during the reproductive age and may present as a rapidly growing adnexal mass.","definition_xrefs":["NCIT:C40443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wilms tumor","termid":"MONDO:0006058"},{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian Wilms tumor","secondary_identifiers":["MEDGEN:275296","DOID:2153","UMLS:C1518746"],"synonyms":[{"name":"ovarian Wilms tumor","type":"exact"},{"name":"ovarian Wilms' cancer","type":"related"},{"name":"ovarian Wilms' tumor","type":"exact"},{"name":"ovarian Wilms' tumour","type":"exact"},{"name":"ovary Wilms tumor","type":"exact"},{"name":"ovary Wilms tumour","type":"exact"}],"termid":"MONDO:0002230","xrefs":{"Monarch":{"xref_id":"0002230"}}}


id: GO:1904383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium phosphate stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:24625659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to salt","termid":"GO:1902074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sodium phosphate","termid":"GO:1904383"}


id: GO:0044549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GTP cyclohydrolase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GTP cyclohydrolase binding","secondary_identifiers":["GO:0043106"],"synonyms":[{"name":"GTP cyclohydrolase I binding","type":"narrow"}],"termid":"GO:0044549"}


id: PBO:0074414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 15","termid":"PBO:0074414"}


id: PBO:0032710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_error-free_translesion_synthesis_of_pyrimidine-pyrimidone_6-4_photoproducts","termid":"PBO:0032710"}


id: MONDO:0021231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the retina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"},{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"},{"relation_name":"is_a","term_name":"nervous system neoplasm","termid":"MONDO:0021248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retina neoplasm","secondary_identifiers":["UMLS:C0524801","MEDGEN:101180","EFO:1000509","NCIT:C4800"],"synonyms":[{"name":"neoplasm of retina","type":"exact"},{"name":"neoplasm of the retina","type":"exact"},{"name":"retina neoplasm (disease)","type":"exact"},{"name":"retina tumor","type":"exact"},{"name":"retina tumour","type":"exact"},{"name":"retinal neoplasm","type":"exact"},{"name":"retinal tumor","type":"exact"},{"name":"retinal tumour","type":"exact"},{"name":"tumor of retina","type":"exact"},{"name":"tumor of the retina","type":"exact"},{"name":"tumour of retina","type":"exact"},{"name":"tumour of the retina","type":"exact"}],"termid":"MONDO:0021231","xrefs":{"Monarch":{"xref_id":"0021231"}}}


id: GO:0033121
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314","SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73415,76373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[70459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of purine nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide catabolic process","termid":"GO:0030811"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"regulates","term_name":"purine nucleotide catabolic process","termid":"GO:0006195"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_02785":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"regulation of purine nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"regulation of purine nucleotide breakdown","type":"exact"},{"name":"regulation of purine nucleotide catabolism","type":"exact"},{"name":"regulation of purine nucleotide degradation","type":"exact"}],"termid":"GO:0033121","terms_by_termid":{"GO:0006110":null,"GO:0045820":null}}


id: GO:1990890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a netrin receptor.","definition_xrefs":["PMID:8861902","GOC:kmv","PMID:9126742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"netrin receptor binding","termid":"GO:1990890"}


id: GO:0110039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nematode male tail tip morphogenesis.","definition_xrefs":["GOC:rz","PMID:28068334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of nematode male tail tip morphogenesis","termid":"GO:0110037"},{"relation_name":"positively_regulates","term_name":"nematode male tail tip morphogenesis","termid":"GO:0045138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nematode male tail tip morphogenesis","termid":"GO:0110039"}


id: PBO:0008725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA arginine","termid":"PBO:0008725"}


id: MONDO:0002950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of basal cell carcinoma characterized by the presence of clear cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"skin clear cell basal cell carcinoma","secondary_identifiers":["DOID:4293","NCIT:C27536","UMLS:C1516599","MEDGEN:275752"],"synonyms":[{"name":"clear cell basal cell carcinoma","type":"exact"},{"name":"skin clear cell basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002950","xrefs":{"Monarch":{"xref_id":"0002950"}}}


id: MONDO:0009106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital abnormality in which the spinal cord is split in half by fibrous or bony tissue. It may present as an isolated phenomenon or in association with spina bifida.","definition_xrefs":["NCIT:C98913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"diastematomyelia","secondary_identifiers":["ICD9:742.51","ICD10CM:Q06.2","MEDGEN:3801","OMIM:222500","GARD:1851","SCTID:49351009","MedDRA:10012750","Orphanet:1671","UMLS:C0011999","icd11.foundation:2070601288"],"synonyms":[{"name":"Dimyelia","type":"related"},{"name":"Pseudodiplomyelia","type":"related"},{"name":"SCM type 1","type":"exact"},{"name":"SSCM","type":"related"},{"name":"diastematomyelia","type":"exact"},{"name":"diplomyelia","type":"related"},{"name":"split cord malformation","type":"related"},{"name":"split cord malformation type 1","type":"exact"},{"name":"split spinal cord malformation","type":"related"}],"termid":"MONDO:0009106","xrefs":{"Monarch":{"xref_id":"0009106"}}}


id: SO:0001361
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Five_methoxycarbonylmethyl_2_prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methoxycarbonylmethyl_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:069"],"synonyms":[{"name":"5-methoxycarbonylmethyl-2'-O-methyluridine","type":"exact"},{"name":"five methoxycarbonylmethyl two prime O methyluridine","type":"exact"},{"name":"mcm5Um","type":"exact"}],"termid":"SO:0001361"}


id: GO:2001036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tongue muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle fiber differentiation","termid":"GO:1902810"},{"relation_name":"is_a","term_name":"regulation of tongue muscle cell differentiation","termid":"GO:2001035"},{"relation_name":"negatively_regulates","term_name":"tongue muscle cell differentiation","termid":"GO:0035981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tongue muscle cell differentiation","termid":"GO:2001036"}


id: PATO:0000626
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being moved or displaced to one side so as to make lateral.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateralized","termid":"PATO:0000626"}


id: GO:0019056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus modulates the frequency, rate or extent of its host's transcription.","definition_xrefs":["PMID:7799962"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host transcription (obsolete GO:0019056)","synonyms":[{"name":"modification of host transcription","type":"exact"},{"name":"modulation by virus of host transcription","type":"narrow"},{"name":"perturbation of host cell transcription","type":"exact"}],"termid":"GO:0019056"}


id: MONDO:0016720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete atypical papilloma of choroid plexus (obsolete MONDO:0016720)","termid":"MONDO:0016720","xrefs":{"Monarch":{"xref_id":"0016720"}}}


id: PBO:0052948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratinocyte differentiation associated protein","termid":"PBO:0052948"}


id: MONDO:0020742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cataract, microcephaly, failure to thrive, kyphoscoliosis syndrome (obsolete MONDO:0020742)","secondary_identifiers":["Orphanet:1317","OMIM:212540","MESH:C537965"],"synonyms":[{"name":"CAMAK syndrome","type":"related"},{"name":"CAMFAK syndrome","type":"related"},{"name":"cataract, microcephaly, arthrogryposis, kyphosis syndrome","type":"related"},{"name":"cataract, microcephaly, failure to thrive, kyphoscoliosis syndrome","type":"related"},{"name":"cataract-microcephaly-failure to thrive-kyphoscoliosis","type":"related"}],"termid":"MONDO:0020742","xrefs":{"Monarch":{"xref_id":"0020742"}}}


id: SO:0001509
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of a change in the structure or number of a chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"alteration_attribute","termid":"SO:0001508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_variation_attribute","synonyms":[{"name":"chromosomal variation attribute","type":"exact"}],"termid":"SO:0001509"}


id: GO:0034846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: naphthyl-2-methylene-succinyl-CoA + H2O = naphthyl-2-hydroxymethyl-succinyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthyl-2-methylene-succinyl-CoA lyase activity (obsolete GO:0034846)","termid":"GO:0034846"}


id: MONDO:0100161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal tubular acidosis (RTA) that is caused by a generalized transport abnormality of the distal tubule. The transport of electrolytes such as sodium, chloride, and potassium that normally occurs in the distal tubule is impaired. This form is distinguished from classical distal RTA and proximal RTA because it results in high levels of potassium in the blood instead of low levels.","direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular acidosis","termid":"MONDO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"hyperkalemic renal tubular acidosis","secondary_identifiers":["UMLS:C0376185","Orphanet:89939","MEDGEN:87662"],"synonyms":[{"name":"hyperkalemic RTA","type":"exact"},{"name":"renal tubular acidosis type 4","type":"exact"},{"name":"type 4 RTA","type":"exact"},{"name":"type 4 renal tubular acidosis","type":"exact"}],"termid":"MONDO:0100161","xrefs":{"Monarch":{"xref_id":"0100161"}}}


id: SO:0000334
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding region of sequence similarity by descent from a common ancestor.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nc_conserved_region","synonyms":[{"name":"conserved non-coding element","type":"exact"},{"name":"conserved non-coding sequence","type":"exact"},{"name":"nc conserved region","type":"exact"},{"name":"noncoding conserved region","type":"exact"}],"termid":"SO:0000334"}


id: GO:0017171
data:
  {"annotated_genes":["SJAG_01136","SJAG_01285","SJAG_03760","SJAG_04785","SJAG_04819","SJAG_02809","SJAG_04928","SJAG_00737","SJAG_00984","SJAG_03910","SJAG_04398","SJAG_01868","SJAG_00975","SJAG_05286","SJAG_03648","SJAG_03258","SJAG_02565","SJAG_02432","SJAG_03261","SJAG_03121"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93362],"is_not":false,"summary":null,"term":"GO:0017171"},{"annotations":[79809,76585,75883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004185"},{"annotations":[61946,75175,79899,68390,67522,76479,65669,77748,66022,79618,74740,62056,69636,74310,75863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004252"},{"annotations":[57600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008236"},{"annotations":[74387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008240"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a substrate by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","definition_xrefs":["Wikipedia:Serine_hydrolase"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_00975":null,"SJAG_00984":null,"SJAG_01136":null,"SJAG_01285":null,"SJAG_01868":null,"SJAG_02432":null,"SJAG_02565":null,"SJAG_02809":null,"SJAG_03121":null,"SJAG_03258":null,"SJAG_03261":null,"SJAG_03648":null,"SJAG_03760":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04785":null,"SJAG_04819":null,"SJAG_04928":null,"SJAG_05286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"serine hydrolase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0017171","terms_by_termid":{"GO:0004185":null,"GO:0004252":null,"GO:0008236":null,"GO:0008240":null,"GO:0017171":null}}


id: GO:0052091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates the frequency, rate or extent of the release of nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquisition of nutrients from host","termid":"GO:0044002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of nutrient release by host","synonyms":[{"name":"modulation by symbiont of nutrient release from host","type":"exact"}],"termid":"GO:0052091"}


id: PBO:0087987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA:pseudouridine synthase; introduces pseudouridines at position 38 or 39 in tRNA; also responsible for pseudouracil modification of some mRNAs; important for maintenance of translation efficiency and normal cell growth, localizes to both the nucleus and cytoplasm; non-essential for viability","termid":"PBO:0087987"}


id: GO:0005596
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XIV) chains; type XIV collagen triple helices may link sheet-forming or fibrillar collagens to other structures.","definition_xrefs":["ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type XIV trimer","termid":"GO:0005596"}


id: MONDO:0002913
data:
  {"annotated_genes":["SJAG_00579"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007959"}]},"cv_name":"mondo","definition":"A benign or malignant (primary or metastatic) tumor involving the cerebellum. -- 2003","definition_xrefs":["NCIT:C2935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar disorder","termid":"MONDO:0002427"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00579":null},"genotype_count":0,"is_obsolete":false,"name":"cerebellar neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D002528","SCTID:126960003","DOID:4205","ICD9:191.6","MEDGEN:40187","UMLS:C0007762"],"synonyms":[{"name":"cerebellar neoplasm","type":"exact"},{"name":"cerebellar tumor","type":"exact"},{"name":"cerebellar tumour","type":"exact"},{"name":"cerebellum cancer","type":"related"},{"name":"cerebellum neoplasm","type":"exact"},{"name":"cerebellum neoplasm (disease)","type":"exact"},{"name":"cerebellum tumor","type":"exact"},{"name":"cerebellum tumour","type":"exact"},{"name":"malignant tumor of cerebellum","type":"narrow"},{"name":"malignant tumour of cerebellum","type":"narrow"},{"name":"neoplasm of cerebellum","type":"exact"},{"name":"neoplasm of the cerebellum","type":"exact"},{"name":"tumor of cerebellum","type":"exact"},{"name":"tumor of the cerebellum","type":"exact"},{"name":"tumour of cerebellum","type":"exact"},{"name":"tumour of the cerebellum","type":"exact"}],"termid":"MONDO:0002913","terms_by_termid":{"MONDO:0007959":null},"xrefs":{"Monarch":{"xref_id":"0002913"}}}


id: PBO:0057120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 204","termid":"PBO:0057120"}


id: MONDO:0020529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adrenocorticotropic hormone (ACTH) independent Cushing syndrome is a form of endogenous Cushing syndrome (CS) that may result from excess secretion of cortisol by either a unilateral and benign (adrenocortical adenoma: 55-60%) or malignant (adrenocortical carcinoma: 35-40 %) adrenocortical tumor or by bilateral adrenal secretion by macronodular adrenal hyperplasia (AIMAH), as an isolated disease or as part of McCune-Albright syndrome (MAS), or by primary pigmented nodular adrenocortical disease (PPNAD), as an isolated disease or as part of Carney complex (CNC).","definition_xrefs":["Orphanet:99893"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare male infertility due to adrenal disorder (obsolete MONDO:0018387)","termid":"MONDO:0018387"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare female infertility due to an adrenal disorder (obsolete MONDO:0018400)","termid":"MONDO:0018400"},{"relation_name":"is_a","term_name":"Cushing syndrome","termid":"MONDO:0018912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTH-independent Cushing syndrome","secondary_identifiers":["icd11.foundation:652536990","GARD:19700","MEDGEN:575037","Orphanet:647758","UMLS:C0342443"],"synonyms":[{"name":"adrenal Cushing syndrome","type":"exact"},{"name":"adrenocorticotropic hormone-independent Cushing syndrome","type":"exact"},{"name":"corticotropin-independent Cushing syndrome","type":"exact"}],"termid":"MONDO:0020529","xrefs":{"Monarch":{"xref_id":"0020529"}}}


id: PR:Q9Y7Z1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nop16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Z1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1539.10","synonyms":[{"name":"Spom972h-nop16","type":"exact"}],"termid":"PR:Q9Y7Z1"}


id: GO:1990185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which lymphatic vessels can be pervaded by fluid.","definition_xrefs":["PMID:23897233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular permeability","termid":"GO:0043114"},{"relation_name":"is_a","term_name":"lymphatic vascular process in circulatory system","termid":"GO:1990183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphatic vascular permeability","termid":"GO:1990185"}


id: GO:0061800
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A supramolecular fiber formed from fibronectin molecules. The fibrils are 5 to 25nm in diameter and can form branched meshworks.","definition_xrefs":["PMID:20690820","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"fibronectin fibril","termid":"GO:0061800"}


id: PBO:0045076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG associated protein 3","termid":"PBO:0045076"}


id: PBO:0060740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 5","termid":"PBO:0060740"}


id: GO:0071385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"cellular response to corticosteroid stimulus","termid":"GO:0071384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucocorticoid stimulus","termid":"GO:0071385"}


id: PBO:0050266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 44","termid":"PBO:0050266"}


id: PBO:0063943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl cis/trans isomerase, NIMA-interacting 4","termid":"PBO:0063943"}


id: PBO:0043936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CREB regulated transcription coactivator 1","termid":"PBO:0043936"}


id: GO:0090486
data:
  {"annotated_genes":["SJAG_02817"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109488],"is_not":false,"summary":null,"term":"GO:0090486"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the oxygen atom of a nucleoside residue in a small RNA molecule. Reaction: S-adenosyl-L-methionine + small RNA = S-adenosyl-L-homocysteine + small RNA containing a 3'-terminal 2'-O-methylnucleotide.","definition_xrefs":["RHEA:37887","GOC:vw","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 2'-O-methyltransferase activity","termid":"GO:0062105"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02817":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"small RNA 2'-O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.386"],"synonyms":[{"name":"small RNA 2'-O-methyltransferase","type":"exact"}],"termid":"GO:0090486","terms_by_termid":{"GO:0090486":null}}


id: PBO:0057477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 596","termid":"PBO:0057477"}


id: MONDO:0011593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign familial infantile epilepsy","termid":"MONDO:0017615"},{"relation_name":"is_a","term_name":"PRRT2-associated paroxysmal movement disorder","termid":"MONDO:0100556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial infantile, 2","secondary_identifiers":["UMLS:C1853995","GARD:16504","MEDGEN:381313","MESH:C565296","OMIM:605751","DOID:0081115"],"synonyms":[{"name":"BFIS2","type":"related"},{"name":"convulsions, benign familial infantile, 2","type":"related"},{"name":"seizures, benign familial infantile, 2","type":"exact"},{"name":"seizures, benign familial infantile, type 2","type":"exact"}],"termid":"MONDO:0011593","xrefs":{"Monarch":{"xref_id":"0011593"}}}


id: PR:Q9C0Z1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe3 gene.","definition_xrefs":["UniProtKB:Q9C0Z1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein PB24D3.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.01","synonyms":[{"name":"Spom972h-toe3","type":"exact"}],"termid":"PR:Q9C0Z1"}


id: PBO:0070227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 161 pseudogene","termid":"PBO:0070227"}


id: MONDO:0022821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital benign spinal muscular atrophy dominant","termid":"MONDO:0022821","xrefs":{"Monarch":{"xref_id":"0022821"}}}


id: FYPO:0006110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which small interfering RNA transcripts derived from the silent mating-type cassettes are present at greater levels than normal.","definition_xrefs":["PMID:28404620","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased siRNA level","termid":"FYPO:0004207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased silent mating-type cassette transcript-derived siRNA level","synonyms":[{"name":"increased accumulation of siRNAs homologous to silent mating-type cassette","type":"related"},{"name":"increased accumulation of silent mating-type cassette transcript-derived siRNA","type":"exact"},{"name":"increased level of silent mating-type cassette transcript-derived siRNA","type":"exact"},{"name":"increased mating-type region heterochromatin transcript-derived siRNA level","type":"exact"},{"name":"increased silent mating-type cassette transcript-derived siRNA level during mitotic cell cycle","type":"related"},{"name":"increased silent mating-type cassette transcript-derived siRNA level during vegetative growth","type":"exact"},{"name":"increased silent mating-type region transcript-derived siRNA level","type":"exact"}],"termid":"FYPO:0006110"}


id: MONDO:0032574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrodysplasia, brachydactyly, and overlapping malformed digits","secondary_identifiers":["UMLS:C4748496","MEDGEN:1648332","OMIM:618167"],"synonyms":[{"name":"OCBMD","type":"related"},{"name":"OSTEOCHONDRODYSPLASIA, BRACHYDACTYLY, AND OVERLAPPING MALFORMED DIGITS","type":"related"}],"termid":"MONDO:0032574","xrefs":{"Monarch":{"xref_id":"0032574"}}}


id: PBO:0036120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein-protein_interaction","termid":"PBO:0036120"}


id: PBO:0083855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Expressed copy (at MATa) of a1; homeobox-domain protein that, along with alpha2, represses transcription of haploid-specific genes in diploid cells; MATa1 pre-mRNA splicing requires Bud13p and Ist3p; a1 sequence is not present in SGD because the sequenced S288C strain is MATalpha, not MATa","termid":"PBO:0083855"}


id: PBO:0067007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 14, pseudogene","termid":"PBO:0067007"}


id: PBO:0087836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thioredoxin peroxidase; acts as both ribosome-associated and free cytoplasmic antioxidant; self-associates to form a HMW chaperone complex under oxidative stress; chaperone activity essential for growth in zinc deficiency; hydrogen peroxide receptor and signal transducer in a light sensing pathway; required for telomere length maintenance; binds and modulates Cdc19p activity; protein abundance increases and forms cytoplasmic foci during DNA replication stress","termid":"PBO:0087836"}


id: GO:0030003
data:
  {"annotated_genes":["SJAG_01913","SJAG_02023","SJAG_00136","SJAG_04698","SJAG_02457","SJAG_03962","SJAG_03879","SJAG_03516","SJAG_04584","SJAG_04675","SJAG_04167","SJAG_03793","SJAG_00923","SJAG_00532","SJAG_01353","SJAG_00222","SJAG_02019","SJAG_01435","SJAG_01669","SJAG_04867","SJAG_04258","SJAG_02240","SJAG_02470","SJAG_04892","SJAG_02399","SJAG_02474","SJAG_00668","SJAG_02834","SJAG_00301","SJAG_04403","SJAG_03850","SJAG_01129","SJAG_00328","SJAG_04757","SJAG_04031","SJAG_01990","SJAG_03631","SJAG_04028","SJAG_04096","SJAG_02735","SJAG_01400","SJAG_04616","SJAG_00212","SJAG_00516","SJAG_02532","SJAG_03667","SJAG_00916","SJAG_00822","SJAG_01004","SJAG_04185","SJAG_03862","SJAG_03528","SJAG_01007","SJAG_01541","SJAG_02578","SJAG_01817","SJAG_01803","SJAG_02883","SJAG_02080","SJAG_00792","SJAG_02847","SJAG_05294","SJAG_03866","SJAG_00802","SJAG_04955","SJAG_04743","SJAG_04677","SJAG_04607","SJAG_01694","SJAG_04760","SJAG_01078","SJAG_04032","SJAG_01397","SJAG_02968","SJAG_02716"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104126,100825,94433,94440,78009],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[71193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[71869,71459,78694,80593,113745,70571,73925,72711,80311,100252,109166,98439,73800,118974,75551,73929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"},{"annotations":[75264,100496,108215,93465,78401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"},{"annotations":[75265,78402,94386,74646,59022,71550,92633,78343,104601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006879"},{"annotations":[70559,74797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"},{"annotations":[73976,76173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"},{"annotations":[100253,95771,72656,78451,70966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"},{"annotations":[74614,104517,104656,76238,77460,78650,95057,103916,100497,73205,114727,75092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006882"},{"annotations":[104128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033212"},{"annotations":[113596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[78012,92779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[100851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030641"},{"annotations":[78231,71183,71805,73584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[69565,62068,62172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[104251,96164,95984,101978,71384,73341,73012,78849,80397,88357,74363,100352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of monoatomic cations within a cell. 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id: PBO:0061441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 2 group F member 1","termid":"PBO:0061441"}


id: MONDO:0019219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of biogenic amine metabolism and transport","termid":"MONDO:0019250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inborn disorder of neurotransmitter metabolism and transport","secondary_identifiers":["MEDGEN:1842206","GARD:18950","UMLS:C5681289","Orphanet:79169"],"synonyms":[{"name":"disorder of neurotransmitter metabolism and transport","type":"related"}],"termid":"MONDO:0019219","xrefs":{"Monarch":{"xref_id":"0019219"}}}


id: MONDO:0015373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Saldino-Mainzer syndrome (obsolete MONDO:0015373)","termid":"MONDO:0015373","xrefs":{"Monarch":{"xref_id":"0015373"}}}


id: GO:0075114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont interferes with, inhibits or disrupts a transmembrane receptor-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated suppression of host transmembrane receptor-mediated signal transduction (obsolete GO:0075114)","synonyms":[{"name":"disruption of host transmembrane receptor-mediated signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host transmembrane receptor-mediated signal transduction","type":"exact"},{"name":"suppression by symbiont of host transmembrane receptor-mediated signal transduction","type":"exact"}],"termid":"GO:0075114"}


id: PBO:0066830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 129","termid":"PBO:0066830"}


id: MONDO:0014375
data:
  {"annotated_genes":["SJAG_04059","SJAG_04049"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86768,86769],"is_not":false,"summary":null,"term":"MONDO:0014375"}]},"cv_name":"mondo","definition":"Congenital chronic diarrhea with protein-losing enteropathy is a rare, genetic, intestinal disease characterized by early-onset, chronic, non-infectious, non-bloody, watery diarrhea associated with protein-losing enteropathy which results in hypoalbuminemia, hypogammaglobulinemia and elevated stool alpha-1-antitrypsin. Patients typically present severe, intractable diarrhea, failure to thrive, recurrent infections and edema.","definition_xrefs":["Orphanet:329242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diarrhea","termid":"MONDO:0000824"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital diarrhea 7 with exudative enteropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17500","MEDGEN:862953","UMLS:C4014516","OMIM:615863","DOID:0060778"],"synonyms":[{"name":"DGAT1 congenital diarrhea","type":"exact"},{"name":"DGAT1 congenital diarrhoea","type":"exact"},{"name":"DIAR7","type":"related"},{"name":"congenital chronic diarrhea with exudative enteropathy","type":"exact"},{"name":"congenital chronic diarrhea with protein-losing enteropathy","type":"exact"},{"name":"congenital chronic diarrhoea with exudative enteropathy","type":"exact"},{"name":"congenital chronic diarrhoea with protein-losing enteropathy","type":"exact"},{"name":"congenital diarrhea caused by mutation in DGAT1","type":"exact"},{"name":"congenital diarrhoea caused by mutation in DGAT1","type":"exact"},{"name":"diarrhea 7","type":"related"},{"name":"diarrhea 7, protein-losing enteropathy type","type":"exact"},{"name":"diarrhea type 7","type":"exact"},{"name":"diarrhoea 7","type":"related"},{"name":"diarrhoea 7, protein-losing enteropathy type","type":"exact"},{"name":"diarrhoea type 7","type":"exact"}],"termid":"MONDO:0014375","terms_by_termid":{"MONDO:0014375":null},"xrefs":{"Monarch":{"xref_id":"0014375"}}}


id: PBO:0077549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 256 pseudogene 2","termid":"PBO:0077549"}


id: GO:0038093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the Fc portion of an immunoglobulin to an Fc receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. The Fc portion of an immunoglobulin is its C-terminal constant region.","definition_xrefs":["GOC:phg","Wikipedia:Fc_receptor"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-regulating cell surface receptor signaling pathway","termid":"GO:0002768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Fc receptor signaling pathway","synonyms":[{"name":"Fc receptor signalling pathway","type":"exact"}],"termid":"GO:0038093"}


id: PBO:0089390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp11","termid":"PBO:0089390"}


id: PBO:0065458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase 4 pseudogene 1","termid":"PBO:0065458"}


id: GO:0044008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of an organism from one host to another (or another place in the environment) by means of a third organism (often an insect or other animal). The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete dissemination or transmission of symbiont from host by vector (obsolete GO:0044008)","synonyms":[{"name":"dissemination or transmission of organism from host by vector","type":"exact"}],"termid":"GO:0044008"}


id: GO:0038112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-8 binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-8","termid":"GO:0098759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-8-mediated signaling pathway","synonyms":[{"name":"IL-8-mediated signaling pathway","type":"exact"},{"name":"interleukin-8-mediated signalling pathway","type":"exact"}],"termid":"GO:0038112"}


id: MONDO:1012411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"compulsive disorder, non-human animal","termid":"MONDO:1011636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compulsive disorder, dog","secondary_identifiers":["OMIA:001530-9615"],"termid":"MONDO:1012411","xrefs":{"Monarch":{"xref_id":"1012411"}}}


id: MONDO:0006452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, usually aggressive, primary thymic carcinoma, characterized by the presence of tumor cells morphologically resembling soft tissue sarcoma.","definition_xrefs":["NCIT:C6463"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"thymus squamous cell carcinoma","termid":"MONDO:0003493"},{"relation_name":"is_a","term_name":"sarcomatoid carcinoma","termid":"MONDO:0006406"},{"relation_name":"is_a","term_name":"thymic carcinoma","termid":"MONDO:0006451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"thymic sarcomatoid carcinoma","secondary_identifiers":["UMLS:C1335924","MEDGEN:234772","DOID:8138","EFO:1000577"],"synonyms":[{"name":"Thymus sarcomatoid carcinoma","type":"exact"},{"name":"sarcomatoid carcinoma of Thymus","type":"exact"},{"name":"sarcomatoid carcinoma of the Thymus","type":"exact"},{"name":"thymic carcinosarcoma","type":"exact"},{"name":"thymic sarcomatoid carcinoma","type":"exact"},{"name":"thymic spindle cell carcinoma","type":"exact"},{"name":"thymus sarcomatoid carcinoma","type":"exact"}],"termid":"MONDO:0006452","xrefs":{"Monarch":{"xref_id":"0006452"}}}


id: FYPO:0001272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation stops before completing separation of chromosomes, and DNA becomes spread into an indistinct mass along much of the length of the mitotic spindle.","definition_xrefs":["PomBase:mah","PMID:22711988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete, unequal mitotic sister chromatid segregation","termid":"FYPO:0001271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000337","FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"incomplete, unequal mitotic sister chromatid segregation, with smeared DNA","synonyms":[{"name":"incomplete, unequal mitotic sister chromatid segregation, with smeared DNA during vegetative growth","type":"exact"},{"name":"incomplete, unequal mitotic sister chromatid separation, with smeared DNA","type":"related"},{"name":"incomplete, unequal sister chromatid segregation, with smeared DNA during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001272"}


id: GO:0006782
data:
  {"annotated_genes":["SJAG_00097","SJAG_04944","SJAG_02896","SJAG_04109","SJAG_05283","SJAG_03961","SJAG_02876","SJAG_01372"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57244,59215,60293,63043,63181,64866,67804,80255],"is_not":false,"summary":null,"term":"GO:0006782"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of protoporphyrinogen IX.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound biosynthetic process","termid":"GO:0006779"},{"relation_name":"is_a","term_name":"protoporphyrinogen IX metabolic process","termid":"GO:0046501"},{"relation_name":"part_of","term_name":"heme biosynthetic process","termid":"GO:0006783"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_01372":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"part_of","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"protoporphyrinogen IX biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"synonyms":[{"name":"protoporphyrinogen IX anabolism","type":"exact"},{"name":"protoporphyrinogen IX biosynthesis","type":"exact"},{"name":"protoporphyrinogen IX formation","type":"exact"},{"name":"protoporphyrinogen IX synthesis","type":"exact"}],"termid":"GO:0006782","terms_by_termid":{"GO:0006782":null}}


id: PBO:0017856
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of PNPG to glucose is 20.3(uM min-1 ml-2)","termid":"PBO:0017856"}


id: GO:0060967
data:
  {"annotated_genes":["SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of gene silencing by RNA. Gene silencing by RNA is the process in which RNA molecules inactivate expression of target genes.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of gene silencing by regulatory ncRNA","termid":"GO:0060966"},{"relation_name":"negatively_regulates","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gene silencing by regulatory ncRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of gene silencing by RNA","type":"related"},{"name":"negative regulation of gene silencing by ncRNA","type":"related"}],"termid":"GO:0060967","terms_by_termid":{"GO:0060906":null}}


id: PBO:0030356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched,_elongated_cell_during_cellular_hyperosmotic_response","termid":"PBO:0030356"}


id: MONDO:0019319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign wart-like, pigmented skin lesion appearing on various parts of the body at birth or early in childhood, usually in linear groupings.","definition_xrefs":["NCIT:C4674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear verrucous nevus syndrome","termid":"MONDO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"verrucous nevus","secondary_identifiers":["Orphanet:79467","UMLS:C0362030","SCTID:398723007","GARD:19020","MEDGEN:83927"],"synonyms":[{"name":"verrucous Epidermal Nevus","type":"exact"}],"termid":"MONDO:0019319","xrefs":{"Monarch":{"xref_id":"0019319"}}}


id: PBO:0017784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP(CTP) tRNA nucleotidyltransferase Cca1 (predicted)","termid":"PBO:0017784"}


id: SO:0000584
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tmRNA liberates a mRNA from a stalled ribosome. To accomplish this part of the tmRNA is used as a reading frame that ends in a translation stop signal. The broken mRNA is replaced in the ribosome by the tmRNA and translation of the tmRNA leads to addition of a proteolysis tag to the incomplete protein enabling recognition by a protease. Recently a number of permuted tmRNAs genes have been found encoded in two parts. TmRNAs have been identified in eubacteria and some chloroplasts but are absent from archeal and Eukaryote nuclear genomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tmRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/TmRNA"],"synonyms":[{"name":"10Sa RNA","type":"related"},{"name":"INSDC_feature:tmRNA","type":"exact"},{"name":"ssrA","type":"related"}],"termid":"SO:0000584"}


id: GO:0046392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of galactarate, the anion of galactaric acid.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid catabolic process","termid":"GO:0019579"},{"relation_name":"is_a","term_name":"galactarate metabolic process","termid":"GO:0019580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"galactarate catabolic process","secondary_identifiers":["GO:0019582","MetaCyc:GALACTARDEG-PWY"],"synonyms":[{"name":"D-galactarate breakdown","type":"related"},{"name":"D-galactarate catabolic process","type":"related"},{"name":"D-galactarate catabolism","type":"related"},{"name":"D-galactarate degradation","type":"related"},{"name":"galactarate breakdown","type":"exact"},{"name":"galactarate catabolism","type":"exact"},{"name":"galactarate degradation","type":"exact"}],"termid":"GO:0046392"}


id: MONDO:0004155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A embryonal carcinoma of the central nervous system that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult central nervous system germ cell tumor","termid":"MONDO:0003405"},{"relation_name":"is_a","term_name":"embryonal carcinoma of the central nervous system","termid":"MONDO:0018843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult central nervous system embryonal carcinoma","secondary_identifiers":["MEDGEN:234580","NCIT:C5790","UMLS:C1370503","DOID:7233"],"synonyms":[{"name":"Central nervous system embryonal carcinoma","type":"exact"},{"name":"adult CNS embryonal carcinoma","type":"exact"},{"name":"adult central nervous system embryonal carcinoma","type":"exact"},{"name":"adult embryonal carcinoma of the central nervous system","type":"exact"},{"name":"embryonal carcinoma of adult CNS","type":"exact"},{"name":"embryonal carcinoma of adult central nervous system","type":"exact"},{"name":"embryonal carcinoma of the adult CNS","type":"exact"},{"name":"embryonal carcinoma of the adult central nervous system","type":"exact"},{"name":"embryonal carcinoma of the central nervous system of adults","type":"exact"}],"termid":"MONDO:0004155","xrefs":{"Monarch":{"xref_id":"0004155"}}}


id: GO:0004636
data:
  {"annotated_genes":["SJAG_02400"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60036],"is_not":false,"summary":null,"term":"GO:0004636"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(5-phospho-D-ribosyl)-ATP + H2O = 1-(5-phosphonatoribosyl)-5'-AMP + diphosphate + H+.","definition_xrefs":["RHEA:22828","EC:3.6.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoribosyl-ATP diphosphatase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:HISTPRATPHYD-RXN","KEGG_REACTION:R04035"],"synonyms":[{"name":"1-(5-phosphoribosyl)-ATP diphosphohydrolase activity","type":"related"},{"name":"phosphoribosyl-ATP pyrophosphatase activity","type":"exact"},{"name":"phosphoribosyladenosine triphosphate pyrophosphatase activity","type":"related"}],"termid":"GO:0004636","terms_by_termid":{"GO:0004636":null}}


id: PBO:0066349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras converting CAAX endopeptidase 1","termid":"PBO:0066349"}


id: PBO:0055363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2792","termid":"PBO:0055363"}


id: SO:0001997
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A heterochromatic region of the chromosome, adjacent to the telomere (on the centromeric side) that contains repetitive DNA and sometimes genes and it is transcribed.","definition_xrefs":["POMBE:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_structural_element","termid":"SO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subtelomere","termid":"SO:0001997"}


id: GO:0075101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of protein kinase-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont protein kinase-mediated signal transduction (obsolete GO:0075101)","termid":"GO:0075101"}


id: PBO:0089915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIB complex subunit Bdp1","termid":"PBO:0089915"}


id: GO:0003137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to heart induction.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete Notch signaling pathway involved in heart induction (obsolete GO:0003137)","synonyms":[{"name":"Notch signalling pathway involved in heart induction","type":"exact"}],"termid":"GO:0003137"}


id: PBO:0063523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDYN antisense RNA 1","termid":"PBO:0063523"}


id: MONDO:0700081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition beginning in the first day of life that results from inadequate surfactant production, causing increased work of breathing and impaired gas exchange.","definition_xrefs":["SCTID:46775006"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute respiratory failure","termid":"MONDO:0001208"},{"relation_name":"is_a","term_name":"primary interstitial lung disease specific to childhood","termid":"MONDO:0017015"},{"relation_name":"is_a","term_name":"pediatric acute respiratory distress syndrome","termid":"MONDO:0100131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"newborn respiratory distress syndrome","secondary_identifiers":["DOID:12716","EFO:1000644","ICD9:769","NCIT:C27560"],"synonyms":[{"name":"HMD - hyaline membrane disease","type":"exact"},{"name":"NRDS","type":"related"},{"name":"RDS","type":"broad"},{"name":"RDS - infants","type":"related"},{"name":"RDS Of newborns","type":"exact"},{"name":"RDS of prematurity","type":"narrow"},{"name":"RDS, respiratory distress syndrome Of newborns","type":"exact"},{"name":"hyaline membrane disease","type":"exact"},{"name":"infant ARDS","type":"exact"},{"name":"infant acute respiratory distress syndrome","type":"exact"},{"name":"infant respiratory distress syndrome","type":"exact"},{"name":"neonatal respiratory distress","type":"exact"},{"name":"neonatal respiratory distress syndrome","type":"exact"},{"name":"newborns (RDS), respiratory distress syndrome Of","type":"exact"},{"name":"pulmonary hyaline membrane disease","type":"exact"},{"name":"pulmonary hypoperfusion syndrome of newborn","type":"exact"},{"name":"respiratory distress syndrome","type":"broad"},{"name":"respiratory distress syndrome Of newborns","type":"exact"},{"name":"respiratory distress syndrome Of newborns (RDS)","type":"exact"},{"name":"respiratory distress syndrome in premature infants","type":"narrow"},{"name":"respiratory distress syndrome in the newborn","type":"exact"},{"name":"respiratory distress syndrome of newborn","type":"exact"},{"name":"respiratory distress syndrome, infant","type":"related"},{"name":"syndrome Of newborns (RDS), respiratory distress","type":"exact"}],"termid":"MONDO:0700081","xrefs":{"Monarch":{"xref_id":"0700081"}}}


id: MONDO:0006803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myocardial infarction in which the inferior wall of the heart is involved. It is often caused by occlusion of the right coronary artery.","definition_xrefs":["MESH:D056989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocardial infarction","termid":"MONDO:0005068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"inferior myocardial infarction","secondary_identifiers":["DOID:5850","EFO:1000983","MEDGEN:83305","UMLS:C0340305","MedDRA:10057546"],"termid":"MONDO:0006803","xrefs":{"Monarch":{"xref_id":"0006803"}}}


id: PBO:0027776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_2-bromo-2-(((4-methylphenyl)sulfonyl)methyl)-1-indanone","termid":"PBO:0027776"}


id: PBO:0017668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Rieske ISP assembly ATPase Bcs1 (predicted)","termid":"PBO:0017668"}


id: PBO:0057694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1283-2","termid":"PBO:0057694"}


id: MONDO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple congenital anomalies-hypotonia-seizures syndrome (obsolete MONDO:0000142)","termid":"MONDO:0000142","xrefs":{"Monarch":{"xref_id":"0000142"}}}


id: PBO:0113563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit, Ost4","termid":"PBO:0113563"}


id: GO:0050004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + isoflavone = UDP + isoflavone 7-O-beta-D-glucoside.","definition_xrefs":["MetaCyc:ISOFLAVONE-7-O-GLUCOSYLTRANSFERASE-RXN","EC:2.4.1.170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"isoflavone 7-O-glucosyltransferase activity","secondary_identifiers":["RHEA:56344"],"synonyms":[{"name":"UDP-glucose:isoflavone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-flavonoid 7-O-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:isoflavone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:isoflavone 7-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-isoflavone 7-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0050004"}


id: PBO:0073135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC16 homolog A, endoplasmic reticulum export factor","termid":"PBO:0073135"}


id: PBO:0077005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 7","termid":"PBO:0077005"}


id: GO:0035017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the patterns of cell differentiation in the cuticle.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"cuticle development","termid":"GO:0042335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuticle pattern formation","termid":"GO:0035017"}


id: PBO:0029642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_calcium_during_cellular_hypotonic_response","termid":"PBO:0029642"}


id: PBO:0046067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit K pseudogene 2","termid":"PBO:0046067"}


id: FYPO:0002355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in silent mating-type cassettes occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"},{"relation_name":"is_a","term_name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","termid":"FYPO:0007373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased silent mating-type cassette histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0002355"}


id: MONDO:0004615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a gingiva of upper jaw.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingival cancer","termid":"MONDO:0005507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"upper gum cancer","secondary_identifiers":["UMLS:C0153365","SCTID:363383000","MEDGEN:509265","DOID:8601","ICD9:143.0"],"synonyms":[{"name":"cancer of gingiva of upper jaw","type":"exact"},{"name":"gingiva of upper jaw cancer","type":"exact"},{"name":"malignant gingiva of upper jaw neoplasm","type":"exact"},{"name":"malignant neoplasm of gingiva of upper jaw","type":"exact"},{"name":"malignant tumor of upper gingiva","type":"exact"},{"name":"malignant tumor of upper gum","type":"exact"},{"name":"malignant tumour of upper gingiva","type":"exact"},{"name":"malignant tumour of upper gum","type":"exact"}],"termid":"MONDO:0004615","xrefs":{"Monarch":{"xref_id":"0004615"}}}


id: FYPO:0006878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology (i.e. size, shape, and structure) that undergoes two or more rounds of cell division in which septum assembly is abnormal, and then dies.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, with abnormal septation","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, with abnormal septum assembly","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, with abnormal septum formation","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, with abnormal septation","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, with abnormal septation","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, with abnormal septation","type":"exact"}],"termid":"FYPO:0006878"}


id: PBO:0078521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 11","termid":"PBO:0078521"}


id: PBO:0004933
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifunctional enzyme","termid":"PBO:0004933"}


id: FYPO:0004928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which DNA is broken into small fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented DNA","termid":"FYPO:0000160"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"fragmented DNA during vegetative growth","synonyms":[{"name":"DNA fragmentation during vegetative growth","type":"exact"},{"name":"fragmented DNA during mitotic cell cycle","type":"related"},{"name":"fragmented nucleus during vegetative growth","type":"related"}],"termid":"FYPO:0004928"}


id: GO:0071461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating redox state. Redox state refers to the balance of oxidized versus reduced forms of electron donors and acceptors in an organelle, cell or organ; plastoquinone, glutathione (GSH/GSSG), and nicotinamide nucleotides (NAD+/NADH and NADP+/NADPH) are among the most important.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to redox state","termid":"GO:0051775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to redox state","synonyms":[{"name":"cellular redox signal response","type":"exact"}],"termid":"GO:0071461"}


id: PBO:0082697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the kinetochore sub-complex COMA; COMA (Ctf19p, Okp1p, Mcm21p, Ame1p) bridges kinetochore subunits in contact with centromeric DNA with subunits bound to microtubules during kinetochore assembly; involved in minichromosome maintenance; modified by sumoylation; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-O and fission yeast mal2","termid":"PBO:0082697"}


id: PBO:0075105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 154","termid":"PBO:0075105"}


id: PBO:0113797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase/ dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase Alg9","termid":"PBO:0113797"}


id: GO:1904239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of VCP-NPL4-UFD1 AAA ATPase complex assembly.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"regulation of p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904239"}


id: FYPO:0005959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a spindle forms with microtubules emanating from three or more poles.","definition_xrefs":["PMID:15992541","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000120","FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0002399"],"is_obsolete":false,"name":"multipolar spindle","termid":"FYPO:0005959"}


id: FYPO:0001770
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a tRNA methyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal tRNA methyltransferase activity","termid":"FYPO:0001770"}


id: PBO:0001776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear envelope protein Brr6/Brl1","termid":"PBO:0001776"}


id: MONDO:0009066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephropathic juvenile cystinosis is the intermediate form, in regards to severity and age of onset, of cystinosis, a metabolic disease characterized by an accumulation of cystine inside the lysosomes that causes damage in different organs and tissues, particularly in the kidneys and eyes.","definition_xrefs":["Orphanet:411634"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"},{"relation_name":"is_a","term_name":"nephropathic cystinosis","termid":"MONDO:0100151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0004736","MONDO:0002561"],"is_obsolete":false,"name":"juvenile nephropathic cystinosis","secondary_identifiers":["NANDO:1200163","MEDGEN:75701","ICD10EXP:N16.3*","OMIM:219900","UMLS:C0268626","SCTID:22830006","GARD:17685","NANDO:2201235","ICD10EXP:E72.0+","MESH:C562683","icd11.foundation:422905632"],"synonyms":[{"name":"cystinosis, intermediate","type":"related"},{"name":"cystinosis, late-onset juvenile or adolescent nephropathic","type":"exact"},{"name":"cystinosis, late-onset juvenile or adolescent nephropathic type","type":"related"},{"name":"intermediate cystinosis","type":"exact"},{"name":"juvenile cystinosis","type":"exact"},{"name":"juvenile nephropathic cystinosis","type":"exact"}],"termid":"MONDO:0009066","xrefs":{"Monarch":{"xref_id":"0009066"}}}


id: GO:0050155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxoglutarate + L-ornithine = H2O + L-glutamate + 3,4-dihydro-2H-pyrrole-2-carboxylate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete ornithine(lysine) transaminase activity (obsolete GO:0050155)","synonyms":[{"name":"L-ornithine(L-lysine):2-oxoglutarate-aminotransferase activity","type":"exact"},{"name":"L-ornithine:2-oxoglutarate-aminotransferase activity","type":"exact"},{"name":"lysine/ornithine:2-oxoglutarate aminotransferase activity","type":"exact"},{"name":"ornithine(lysine) aminotransferase activity","type":"exact"}],"termid":"GO:0050155"}


id: GO:0033460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0060090","GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"GAG codon-amino acid adaptor activity","synonyms":[{"name":"glutamic acid tRNA","type":"related"}],"termid":"GO:0033460"}


id: PBO:0065462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD6 antisense RNA 2","termid":"PBO:0065462"}


id: SO:0001274
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified inosine is an inosine base feature that has been altered.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inosine","termid":"SO:0001230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_inosine","synonyms":[{"name":"modified inosine","type":"exact"}],"termid":"SO:0001274"}


id: PBO:0040463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP13A4 antisense RNA 1","termid":"PBO:0040463"}


id: PBO:0073807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC6A12 antisense RNA 1","termid":"PBO:0073807"}


id: PBO:0088458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guard protein for 5'-capping of pre-mRNAs Srp2/Npl3","termid":"PBO:0088458"}


id: PBO:0032713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_error-prone_translesion_synthesis","termid":"PBO:0032713"}


id: GO:0001825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial formation of a blastocyst from a solid ball of cells known as a morula.","definition_xrefs":["ISBN:0198542771","ISBN:0124020607","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"blastocyst development","termid":"GO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blastocyst formation","synonyms":[{"name":"blastula formation","type":"related"}],"termid":"GO:0001825"}


id: GO:0035398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Positive regulation of a T cell mediated immune response mediated via cytokine production by a helper T cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell mediated immunity","termid":"GO:0002711"},{"relation_name":"is_a","term_name":"helper T cell enhancement of adaptive immune response","termid":"GO:0035397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"helper T cell enhancement of T cell mediated immune response","synonyms":[{"name":"helper T cell enhancement of T cell mediated immunity","type":"exact"},{"name":"provision of T cell help to T cell","type":"exact"}],"termid":"GO:0035398"}


id: PBO:0027794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphatase_activity_during_cellular_response_to_phosphate_starvation","termid":"PBO:0027794"}


id: GO:0019566
data:
  {"annotated_genes":["SJAG_03958","SJAG_04660","SJAG_02010"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96084,101520,95356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving arabinose, arabino-pentose. L-Arabinose occurs both free, for example in the heartwood of many conifers, and in the combined state, as a constituent of plant hemicelluloses, bacterial polysaccharides etc. D-arabinose is a constituent of arabinonucleosides.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02010":null,"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"arabinose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arabinose metabolism","type":"exact"}],"termid":"GO:0019566","terms_by_termid":{"GO:0019568":null}}


id: PBO:0074959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-1","termid":"PBO:0074959"}


id: PBO:0063610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PFDN1 pseudogene 1","termid":"PBO:0063610"}


id: PBO:0116684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 14 effector protein","termid":"PBO:0116684"}


id: PBO:0041594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 5B pseudogene 1","termid":"PBO:0041594"}


id: PR:G2TRM7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.18c","synonyms":[{"name":"Spom972h-tam5","type":"exact"},{"name":"transcripts altered in meiosis protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRM7"}


id: MONDO:0000572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe combined immunodeficiency that is the result of a mutation on Chromosome 6 RAG1 gene involving genetic rearrangement of both the T- and B-lymphocyte receptor genes.","definition_xrefs":["DOID:0060011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"recombinase activating gene 1 deficiency","synonyms":[{"name":"recombinase activating gene 1 deficiency","type":"exact"}],"termid":"MONDO:0000572","xrefs":{"Monarch":{"xref_id":"0000572"}}}


id: MONDO:0011125
data:
  {"annotated_genes":["SJAG_00995"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87346],"is_not":false,"summary":null,"term":"MONDO:0011125"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitive trichothiodystrophy","termid":"MONDO:0002470"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0021190","MONDO:0005066"],"is_obsolete":false,"name":"trichothiodystrophy 1, photosensitive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:601675","NCIT:C156433","UMLS:C1866504","DOID:0111873","Orphanet:670","MEDGEN:355730","GARD:5270"],"synonyms":[{"name":"PIBIDS syndrome","type":"exact"},{"name":"TTD1","type":"related"},{"name":"Tay syndrome","type":"related"},{"name":"ichthyosiform erythroderma with hair Abnormality and mental and Growth retardation","type":"related"},{"name":"trichothiodystrophy 1, photosensitive","type":"exact"},{"name":"trichothiodystrophy with congenital ichthyosis","type":"related"},{"name":"trichothiodystrophy, photosensitive","type":"related"}],"termid":"MONDO:0011125","terms_by_termid":{"MONDO:0011125":null},"xrefs":{"Monarch":{"xref_id":"0011125"}}}


id: GO:0021523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of somatic motor neurons. Somatic motor neurons innervate skeletal muscle targets and are responsible for transmission of motor impulses from the brain to the periphery. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid","PMID:11262869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord motor neuron differentiation","termid":"GO:0021522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic motor neuron differentiation","termid":"GO:0021523"}


id: PBO:0018094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic septin Spn3","termid":"PBO:0018094"}


id: PR:Q10256
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mud1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein mud1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.08","synonyms":[{"name":"DNA-damage-inducible protein DDI1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mud1","type":"exact"},{"name":"UBA domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10256"}


id: PBO:0067120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 165, pseudogene","termid":"PBO:0067120"}


id: PBO:0054810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2223","termid":"PBO:0054810"}


id: GO:0120014
data:
  {"annotated_genes":["SJAG_03721","SJAG_03416","SJAG_03710","SJAG_03172","SJAG_03746","SJAG_06440","SJAG_16459","SJAG_00576","SJAG_03338","SJAG_04370","SJAG_01229","SJAG_01225","SJAG_03741","SJAG_00230","SJAG_01305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89555,91234,104389,106211,107110,107889,108014],"is_not":false,"summary":null,"term":"GO:0120014"},{"annotations":[102555,70575,101623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990050"},{"annotations":[97888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120019"},{"annotations":[76653,74887,76936,73611,70446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008526"}]},"cv_name":"molecular_function","definition":"Removes a phospholipid from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:25797198","GOC:krc","PMID:20823909","PMID:24220498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00576":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_04370":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0120013","GO:0005215"],"is_obsolete":false,"name":"phospholipid transfer activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"intermembrane phospholipid transfer activity","type":"narrow"},{"name":"phospholipid carrier activity","type":"exact"}],"termid":"GO:0120014","terms_by_termid":{"GO:0008526":null,"GO:0120014":null,"GO:0120019":null,"GO:1990050":null}}


id: MONDO:0013875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any 3-methylglutaconic aciduria in which the cause of the disease is a mutation in the SERAC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"SERAC1-related neurological disorder","termid":"MONDO:0100548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0004736","MONDO:0002525"],"is_obsolete":false,"name":"3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome","secondary_identifiers":["MEDGEN:873604","GARD:12963","OMIM:614739","Orphanet:352328","SCTID:711409002","UMLS:C4040739","DOID:0110001"],"synonyms":[{"name":"3-MGCA type IV (formerly)","type":"related"},{"name":"3-MGCA-4 (formerly)","type":"related"},{"name":"3-Methylglutaconic aciduria with dystonia-deafness, hepatopathy, encephalopathy, and Leigh-like syndrome","type":"related"},{"name":"3-Methylglutaconic aciduria, type 6","type":"related"},{"name":"3-methylglutaconic aciduria caused by mutation in SERAC1","type":"exact"},{"name":"3-methylglutaconic aciduria type 6","type":"exact"},{"name":"3-methylglutaconic aciduria type VI","type":"related"},{"name":"3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome","type":"exact"},{"name":"3-methylglutaconic aciduria with deafness-encephalopathy-Leigh-like syndrome","type":"exact"},{"name":"MEGDEL","type":"exact"},{"name":"MEGDEL syndrome","type":"exact"},{"name":"MGCA6","type":"exact"},{"name":"SERAC1 3-methylglutaconic aciduria","type":"exact"},{"name":"SERAC1 defect","type":"related"}],"termid":"MONDO:0013875","xrefs":{"Monarch":{"xref_id":"0013875"}}}


id: PBO:0052172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium two pore domain channel subfamily K member 3","termid":"PBO:0052172"}


id: PBO:0054208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1588","termid":"PBO:0054208"}


id: PBO:0068008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 310","termid":"PBO:0068008"}


id: GO:0004143
data:
  {"annotated_genes":["SJAG_04883","SJAG_02429"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66793,97996],"is_not":false,"summary":null,"term":"GO:0004143"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1,2-diacyl-sn-glycerol + ATP = a 1,2-diacyl-sn-glycero-3-phosphate + ADP + H+.","definition_xrefs":["RHEA:10272","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid kinase activity","termid":"GO:0001727"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02429":null,"SJAG_04883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"ATP-dependent diacylglycerol kinase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.1.107","MetaCyc:DIACYLGLYKIN-RXN","Reactome:R-HSA-426240"],"synonyms":[{"name":"DGK activity","type":"related"},{"name":"diacylglycerol kinase activity","type":"broad"},{"name":"diacylglycerol kinase activity (ATP)","type":"exact"},{"name":"diglyceride kinase activity","type":"broad"}],"termid":"GO:0004143","terms_by_termid":{"GO:0004143":null}}


id: GO:0047692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ITP + NH3.","definition_xrefs":["EC:3.5.4.18","MetaCyc:ATP-DEAMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine-phosphate deaminase activity","termid":"GO:0047623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"ATP deaminase activity","secondary_identifiers":["RHEA:13037"],"synonyms":[{"name":"ATP aminohydrolase activity","type":"related"},{"name":"adenosine triphosphate deaminase activity","type":"related"}],"termid":"GO:0047692"}


id: GO:0050438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxobutanate + acetyl-CoA + H2O = (R)-2-ethylmalate + CoA + H+.","definition_xrefs":["RHEA:23040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"2-ethylmalate synthase activity","secondary_identifiers":["EC:2.3.3.6","KEGG_REACTION:R00998","MetaCyc:2-ETHYLMALATE-SYNTHASE-RXN"],"synonyms":[{"name":"(R)-2-ethylmalate 2-oxobutanoyl-lyase (CoA-acetylating) activity","type":"related"},{"name":"2-ethylmalate-3-hydroxybutanedioate synthase activity","type":"related"},{"name":"acetyl-CoA:2-oxobutanoate C-acetyltransferase (thioester-hydrolysing, carboxymethyl-forming)","type":"related"},{"name":"propylmalate synthase activity","type":"related"},{"name":"propylmalic synthase activity","type":"related"}],"termid":"GO:0050438"}


id: MONDO:0014943
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87506],"is_not":false,"summary":null,"term":"MONDO:0014943"}]},"cv_name":"mondo","definition":"Any mitochondrial DNA depletion syndrome in which the cause of the disease is a mutation in the TFAM gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 15 (hepatocerebral type)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934657","DOID:0080337","UMLS:C4310690","OMIM:617156"],"synonyms":[{"name":"MTDPS15","type":"related"},{"name":"TFAM mitochondrial DNA depletion syndrome","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 15 (hepatocerebral type)","type":"exact"},{"name":"mitochondrial DNA depletion syndrome caused by mutation in TFAM","type":"exact"}],"termid":"MONDO:0014943","terms_by_termid":{"MONDO:0014943":null},"xrefs":{"Monarch":{"xref_id":"0014943"}}}


id: GO:0002058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to uracil.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase binding","termid":"GO:0002061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"uracil binding","termid":"GO:0002058"}


id: MONDO:0030669
data:
  {"annotated_genes":["SJAG_04537"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87588],"is_not":false,"summary":null,"term":"MONDO:0030669"}]},"cv_name":"mondo","definition":"A severe autosomal recessive developmental disorder characterized by multiple intestinal atresia apparent soon after birth. Affected infants have a distended abdomen and do not pass meconium. There is some evidence of inflammatory bowel disease. Death occurs in the first weeks of life. Some patients may also have immunodeficiency.","definition_xrefs":["OMIM:619708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PI4KA-related disorder","termid":"MONDO:1040012"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04537":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002320"],"is_obsolete":false,"name":"gastrointestinal defects and immunodeficiency syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5676901","MEDGEN:1811526"],"synonyms":[{"name":"GIDID2","type":"exact"},{"name":"gastrointestinal defects and immunodeficiency syndrome 2","type":"exact"},{"name":"multiple intestinal atresia with or without leukopenia","type":"exact"}],"termid":"MONDO:0030669","terms_by_termid":{"MONDO:0030669":null},"xrefs":{"Monarch":{"xref_id":"0030669"}}}


id: FYPO:0004809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of heterochromatin maintenance is shorter than normal in the context of chromatin silencing at centromere outer repeat regions.","definition_xrefs":["PomBase:mah","GO:0070829","PMID:25543137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of heterochromatin maintenance","termid":"FYPO:0008366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat","synonyms":[{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere otr","type":"exact"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at pericentric region","type":"related"},{"name":"decreased duration of heterochromatin maintenance involved in chromatin silencing at pericentromeric region","type":"related"},{"name":"reduced duration of heterochromatin maintenance involved in chromatin silencing at centromere outer repeat","type":"exact"}],"termid":"FYPO:0004809"}


id: GO:0097573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein-S-S-glutathione + glutathione-SH = protein-SH + glutathione-S-S-glutathione.","definition_xrefs":["PMID:18992757","GOC:jd"],"gene_count":0,"genotype_count":0,"name":"obsolete glutathione oxidoreductase activity (obsolete GO:0097573)","termid":"GO:0097573"}


id: PATO:0000781
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000781 circulatory function value (obsolete PATO:0000781)","termid":"PATO:0000781"}


id: PBO:0053755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 996","termid":"PBO:0053755"}


id: SO:0001085
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Different sources report differing sequences.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequencing_information","termid":"SO:0001082"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_conflict","secondary_identifiers":["BS:00069"],"synonyms":[{"name":"conflict","type":"exact"}],"termid":"SO:0001085"}


id: PBO:0063395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6IP pseudogene 2","termid":"PBO:0063395"}


id: PBO:0076858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 2","termid":"PBO:0076858"}


id: PBO:0061976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AP member 1","termid":"PBO:0061976"}


id: MONDO:0008371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pigmentation disease characterized by a reticulate pattern of abnormally dark skin coloring, particularly in the body's folds and creases.","definition_xrefs":["DOID:0060256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reticulate pigment disorder","termid":"MONDO:0000118"},{"relation_name":"is_a","term_name":"disorder of fucoglycosan synthesis","termid":"MONDO:0017747"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093","MONDO:0024322"],"is_obsolete":false,"name":"Dowling-Degos disease","secondary_identifiers":["MedDRA:10068651","MEDGEN:811363","UMLS:C3714534","MESH:C562924","GARD:9775","SCTID:239133004","Orphanet:79145","icd11.foundation:15123132"],"synonyms":[{"name":"DDD1","type":"related"},{"name":"Dowling-Degos Kitamura disease","type":"related"},{"name":"Dowling-Degos disease 1","type":"related"},{"name":"Dowling-Degos disease type 1","type":"exact"},{"name":"dark dot disease","type":"exact"},{"name":"reticular pigment anomaly of flexures","type":"exact"}],"termid":"MONDO:0008371","xrefs":{"Monarch":{"xref_id":"0008371"}}}


id: GO:0019929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to a glutamic acid residue to form 4-(S-L-cysteinyl)-L-glutamic acid.","definition_xrefs":["RESID:AA0315"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 4-(S-L-cysteinyl)-L-glutamic acid (obsolete GO:0019929)","termid":"GO:0019929"}


id: GO:0032905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of transforming growth factor-beta1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta production","termid":"GO:0071604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"transforming growth factor beta1 production","synonyms":[{"name":"TGF-B1 production","type":"exact"},{"name":"TGFB1 production","type":"exact"},{"name":"transforming growth factor-beta1 production","type":"exact"}],"termid":"GO:0032905"}


id: FYPO:0001326
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119942,119944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[119945,119943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[119929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"},{"annotations":[119930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level","termid":"FYPO:0000824"},{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_03118","SJAG_02621"],"name":"altered RNA level during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"secondary_identifiers":["FYPO:0002934"],"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"abnormal RNA level during vegetative growth","type":"exact"},{"name":"abnormal mRNA level during vegetative growth","type":"narrow"},{"name":"altered RNA level during mitotic cell cycle","type":"related"},{"name":"altered cellular RNA level during vegetative growth","type":"exact"},{"name":"altered cellular mRNA level during vegetative growth","type":"narrow"},{"name":"altered cellular messenger RNA level during vegetative growth","type":"narrow"},{"name":"altered mRNA level during mitotic cell cycle","type":"related"},{"name":"altered mRNA level during vegetative growth","type":"narrow"},{"name":"altered mRNA transcript level during vegetative growth","type":"narrow"},{"name":"altered transcript level during vegetative growth","type":"exact"}],"termid":"FYPO:0001326","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO:0004573":null,"FYPO:0004982":null,"FYPO_EXT:0000001":null}}


id: PBO:0080676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHAMM pseudogene 3","termid":"PBO:0080676"}


id: MONDO:0017351
data:
  {"annotated_genes":["SJAG_02388","SJAG_01061"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85780,85781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009388"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of aspartate family metabolism","termid":"MONDO:0037938"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01061":null,"SJAG_02388":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"inborn disorder of lysine and hydroxylysine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21155","ICD10CM:E72.3","ICD9:270.7","ICD9:270.8","Orphanet:289832","SCTID:237929000","MEDGEN:541359","UMLS:C0268552","icd11.foundation:367868681"],"synonyms":[{"name":"disorder of lysine and hydroxylysine metabolism","type":"related"}],"termid":"MONDO:0017351","terms_by_termid":{"MONDO:0009388":null},"xrefs":{"Monarch":{"xref_id":"0017351"}}}


id: GO:0051676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pullulan, a neutral linear polysaccharide composed of repeating units of maltotriose joined by alpha-(1,6)-linkages.","definition_xrefs":["PMID:15013381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"pullulan metabolic process","synonyms":[{"name":"pullulan metabolism","type":"exact"}],"termid":"GO:0051676"}


id: PBO:0078257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable A (pseudogene)","termid":"PBO:0078257"}


id: SO:0001048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region located within an inversion site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site_specific_recombination_target_region","termid":"SO:0000342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_site_part","synonyms":[{"name":"inversion site part","type":"exact"}],"termid":"SO:0001048"}


id: SO:0000303
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Part of the primary transcript that is clipped off during processing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clip","termid":"SO:0000303"}


id: PBO:0108894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 7","termid":"PBO:0108894"}


id: GO:0004125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-seryl-tRNA(Sec) + selenophosphate = L-selenocysteinyl-tRNA(Sec) + H2O + phosphate.","definition_xrefs":["RHEA:22728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenotransferase activity","termid":"GO:0016785"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140101","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"L-seryl-tRNA(Sec) selenium transferase activity","secondary_identifiers":["EC:2.9.1.1","MetaCyc:2.9.1.1-RXN"],"synonyms":[{"name":"L-selenocysteinyl-tRNA(Sec) synthase activity","type":"related"},{"name":"L-selenocysteinyl-tRNA(Sel) synthase activity","type":"related"},{"name":"L-selenocysteinyl-tRNASec synthase activity","type":"related"},{"name":"L-selenocysteinyl-tRNASel synthase activity","type":"related"},{"name":"L-seryl-tRNASec selenium transferase activity","type":"exact"},{"name":"cysteinyl-tRNA(Sec)-selenium transferase activity","type":"related"},{"name":"cysteinyl-tRNA(Sel)-selenium transferase activity","type":"related"},{"name":"cysteinyl-tRNA(Ser) selenium transferase activity","type":"exact"},{"name":"cysteinyl-tRNASec-selenium transferase activity","type":"related"},{"name":"cysteinyl-tRNASel-selenium transferase activity","type":"related"},{"name":"selenocysteine synthase activity","type":"exact"},{"name":"selenocysteinyl-tRNA(Ser) synthase activity","type":"exact"},{"name":"selenophosphate:L-seryl-tRNASec selenium transferase activity","type":"related"}],"termid":"GO:0004125"}


id: PBO:0062761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily P member 1 (gene/pseudogene)","termid":"PBO:0062761"}


id: PBO:0039731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein C2","termid":"PBO:0039731"}


id: PBO:0017848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght7 (predicted)","termid":"PBO:0017848"}


id: PBO:0059686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 52","termid":"PBO:0059686"}


id: GO:0002777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antimicrobial peptide. Such peptides may have protective properties against bacteria, fungi, viruses, or protozoa.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:11807545","PMID:15638771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"},{"relation_name":"part_of","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"}


id: MONDO:0033662
data:
  {"annotated_genes":["SJAG_03357"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86099],"is_not":false,"summary":null,"term":"MONDO:0033662"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03357":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, seizures, and brain atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1755716","OMIM:619076","GARD:18532","UMLS:C5436747"],"synonyms":[{"name":"NEDMISB","type":"exact"}],"termid":"MONDO:0033662","terms_by_termid":{"MONDO:0033662":null},"xrefs":{"Monarch":{"xref_id":"0033662"}}}


id: MONDO:0019716
data:
  {"annotated_genes":["SJAG_04206","SJAG_01822","SJAG_03876","SJAG_04495","SJAG_03689","SJAG_03266","SJAG_04394","SJAG_04334","SJAG_02426","SJAG_03132"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018445"},{"annotations":[86825,86824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[87153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"},{"annotations":[85385,85386,85384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009416"},{"annotations":[85529,85530,85531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009965"},{"annotations":[86800,86802,86801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008318"}]},"cv_name":"mondo","definition":"A group of syndromes caused by genetic birth defects that may lead to the development of malignancies. It is characterized by a large body size or large body parts at birth, or excessive body growth early in childhood. Representative examples include neurofibromatosis, Beckwith-Wiedemann syndrome, and Sturge-Weber syndrome.","definition_xrefs":["NCIT:C94828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01822":null,"SJAG_02426":null,"SJAG_03132":null,"SJAG_03266":null,"SJAG_03689":null,"SJAG_03876":null,"SJAG_04206":null,"SJAG_04334":null,"SJAG_04394":null,"SJAG_04495":null},"genotype_count":0,"is_obsolete":false,"name":"overgrowth syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2986703","GARD:19213","MEDGEN:458929","icd11.foundation:2113355045","Orphanet:93460"],"termid":"MONDO:0019716","terms_by_termid":{"MONDO:0008318":null,"MONDO:0009416":null,"MONDO:0009965":null,"MONDO:0011236":null,"MONDO:0011717":null,"MONDO:0018445":null},"xrefs":{"Monarch":{"xref_id":"0019716"}}}


id: PBO:0080605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 41","termid":"PBO:0080605"}


id: MONDO:0858998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesomelic dysplasia-digital anomalies-intellectual disability syndrome","secondary_identifiers":["UMLS:C5816803","MEDGEN:1843408","Orphanet:632603"],"termid":"MONDO:0858998","xrefs":{"Monarch":{"xref_id":"0858998"}}}


id: PBO:0027163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_kinetochore_during_meiosis","termid":"PBO:0027163"}


id: PR:O14110
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An aminomethyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01259","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminomethyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31G5.14","secondary_identifiers":["UniProtKB:O14110"],"synonyms":[{"name":"GCVT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AMT","type":"exact"},{"name":"glycine cleavage system T protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14110"}


id: PBO:0043968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin zeta like 1","termid":"PBO:0043968"}


id: PR:000045547
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2B that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2B-alpha (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC622.09","synonyms":[{"name":"Spom-htb1","type":"exact"}],"termid":"PR:000045547"}


id: MONDO:0001179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yellowish thickened lesion on the conjunctiva near the cornea representing a benign degenerative change in the conjunctiva caused by the leakage and deposition of certain blood proteins through the permeable capillaries near the limbus.","definition_xrefs":["MESH:D059407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival degeneration","termid":"MONDO:0000949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pinguecula","secondary_identifiers":["DOID:11029","EFO:1001824","MEDGEN:56273","SCTID:87614000","UMLS:C0152255","ICD9:372.51"],"termid":"MONDO:0001179","xrefs":{"Monarch":{"xref_id":"0001179"}}}


id: PBO:0002845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex, histone acetyltransferase subunit Elp3 (predicted)","termid":"PBO:0002845"}


id: PR:C6Y4C3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecl3 gene.","definition_xrefs":["UniProtKB:C6Y4C3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein ecl3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8E4.12c","synonyms":[{"name":"Spom972h-ecl3","type":"exact"}],"termid":"PR:C6Y4C3"}


id: MONDO:0004079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign adenomatous neoplasm that arises from the mucous glands in the bronchus.","definition_xrefs":["NCIT:C5664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchus adenoma","termid":"MONDO:0003427"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung mucous gland adenoma","secondary_identifiers":["MEDGEN:234054","DOID:7030","UMLS:C1332640"],"synonyms":[{"name":"adenoma of bronchial mucous gland","type":"exact"},{"name":"adenoma of bronchial mucus gland","type":"related"},{"name":"adenoma of the bronchial mucous gland","type":"exact"},{"name":"adenoma of the bronchial mucus gland","type":"exact"},{"name":"bronchial cystadenoma","type":"exact"},{"name":"bronchial mucus gland adenoma","type":"related"},{"name":"lung mucous gland adenoma","type":"exact"},{"name":"lung polyadenoma","type":"exact"}],"termid":"MONDO:0004079","xrefs":{"Monarch":{"xref_id":"0004079"}}}


id: MOD:00306
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 113.084064 Da.","definition_xrefs":["RESID:AA0301","PubMed:10523135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"},{"relation_name":"is_a","term_name":"residues isobaric at 113.0-113.1 Da","termid":"MOD:00624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 113.084064 Da","synonyms":[{"name":"L-isoleucine or L-leucine","type":"exact"},{"name":"Xle","type":"exact"}],"termid":"MOD:00306"}


id: PBO:0069354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 614, pseudogene","termid":"PBO:0069354"}


id: MONDO:0009021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Toriello Carey syndrome is a multiple congenital anomaly syndrome characterized by craniofacial dysmorphic features, cerebral anomalies, swallowing difficulties, cardiac defects and hypotonia.","definition_xrefs":["Orphanet:3338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Toriello-Carey syndrome","secondary_identifiers":["OMIM:217980","MESH:C563127","GARD:5225","SCTID:722477003","UMLS:C0796184","MEDGEN:163225","icd11.foundation:147297969"],"synonyms":[{"name":"Toriello-Carey syndrome","type":"exact"},{"name":"agenesis of corpus callosum with facial anomalies and Robin sequence","type":"related"},{"name":"corpus callosum agenesis facial anomalies Robin sequence","type":"related"},{"name":"corpus callosum agenesis-blepharophimosis-Robin sequence syndrome","type":"exact"},{"name":"corpus callosum, agenesis of, with facial anomalies and ROBIN sequence","type":"related"}],"termid":"MONDO:0009021","xrefs":{"Monarch":{"xref_id":"0009021"}}}


id: PBO:0045844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 34","termid":"PBO:0045844"}


id: PBO:0062250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BQ member 1 pseudogene","termid":"PBO:0062250"}


id: GO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior associated with attempts to flee from a threat.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fear-induced aggressive behavior","synonyms":[{"name":"fear-induced aggression","type":"exact"}],"termid":"GO:0002122"}


id: GO:0004666
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (5Z,8Z,11Z,14Z)-eicosatetraenoate + AH2 + 2 O2 = A + H2O + prostaglandin H2.","definition_xrefs":["RHEA:23728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"prostaglandin-endoperoxide synthase activity","secondary_identifiers":["EC:1.14.99.1","MetaCyc:PROSTAGLANDIN-ENDOPEROXIDE-SYNTHASE-RXN","Reactome:R-HSA-2309787","Reactome:R-HSA-140355"],"synonyms":[{"name":"(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate,hydrogen-donor:oxygen oxidoreductase activity","type":"related"},{"name":"(PG)H synthase activity","type":"related"},{"name":"PG synthetase activity","type":"related"},{"name":"fatty acid cyclooxygenase activity","type":"related"},{"name":"prostaglandin G/H synthase activity","type":"related"},{"name":"prostaglandin endoperoxide synthetase activity","type":"related"},{"name":"prostaglandin synthase activity","type":"related"},{"name":"prostaglandin synthetase activity","type":"related"}],"termid":"GO:0004666"}


id: PBO:0066608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 1","termid":"PBO:0066608"}


id: GO:0007447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that results in defined areas of the imaginal disc that will undergo specific cell differentaiton. Imaginal discs are epithelial infoldings in the larvae of holometabolous insects that develop into adult appendages (legs, antennae, wings, etc.) during metamorphosis from larval to adult form.","definition_xrefs":["GOC:isa_complete","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc pattern formation","termid":"GO:0007447"}


id: MONDO:0017867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal 17p13.1 microdeletion syndrome is a rare chromosomal anomaly syndrome characterized by mild global developmental delay/intellectual disability with poor to absent speech, dysmorphic features (long midface, retrognathia with overbite, protruding ears), microcephaly, failure to thrive, wide-based gait and a body posture with knee and elbow flexion and hands held in a midline.","definition_xrefs":["Orphanet:319171"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"chromosome 17p13.1 deletion syndrome","termid":"MONDO:0013415"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal 17p13.1 microdeletion syndrome","secondary_identifiers":["MEDGEN:1657963","UMLS:C4749349","GARD:10996"],"synonyms":[{"name":"distal del(17)(p13.1)","type":"exact"}],"termid":"MONDO:0017867","xrefs":{"Monarch":{"xref_id":"0017867"}}}


id: MONDO:0002831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma of the sinonasal tract characterized by a plexiform or ribbon-like growth pattern, cytological atypia, and lack of histological evidence of keratinization.","definition_xrefs":["NCIT:C54287"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"maxillary sinus carcinoma","termid":"MONDO:0001748"},{"relation_name":"is_a","term_name":"nasal cavity and paranasal sinus squamous cell carcinoma","termid":"MONDO:0044787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"non-keratinizing sinonasal squamous cell carcinoma","secondary_identifiers":["DOID:4003","ICDO:8121/3","UMLS:C0334270","MEDGEN:83119","ONCOTREE:SNSC"],"synonyms":[{"name":"Ringertz carcinoma","type":"related"},{"name":"Schneiderian carcinoma","type":"related"},{"name":"Sinonasal Schneiderian carcinoma","type":"related"},{"name":"Sinonasal cylindrical cell carcinoma","type":"related"},{"name":"Sinonasal transitional cell carcinoma","type":"related"},{"name":"cylindrical cell carcinoma","type":"exact"},{"name":"non-keratinizing sinonasal squamous cell carcinoma","type":"exact"},{"name":"sinonasal squamous cell carcinoma","type":"related"}],"termid":"MONDO:0002831","xrefs":{"Monarch":{"xref_id":"0002831"}}}


id: PBO:0046788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of zeste 2 polycomb repressive complex 2 subunit pseudogene 1","termid":"PBO:0046788"}


id: PBO:0060802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S6","termid":"PBO:0060802"}


id: GO:0035303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of removal of phosphate groups from a molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"regulates","term_name":"dephosphorylation","termid":"GO:0016311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dephosphorylation","termid":"GO:0035303"}


id: PBO:0114521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex WD repeat subunit C, Pcf3","termid":"PBO:0114521"}


id: PBO:0042994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 7","termid":"PBO:0042994"}


id: PBO:0110288
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named after human ortholog CAPRIN-1","termid":"PBO:0110288"}


id: PBO:0002400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia induced family protein","termid":"PBO:0002400"}


id: PBO:0079515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthetase","termid":"PBO:0079515"}


id: FYPO:0001397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches are localized to only the old end of a cell following cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopolar actin cortical patch localization during vegetative growth","termid":"FYPO:0001019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0004803","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"monopolar actin cortical patch localization to old end","synonyms":[{"name":"decreased actin cortical patch localization at non-growing end","type":"related"},{"name":"monopolar F-actin patch localization to old end","type":"exact"},{"name":"monopolar actin cortical patch localisation to old end","type":"exact"},{"name":"monopolar actin cortical patch localization to old end during mitotic cell cycle","type":"related"},{"name":"monopolar actin cortical patch localization to old end during vegetative growth","type":"exact"},{"name":"monopolar actin cortical patch location at old end","type":"related"},{"name":"monopolar actin patch localization to old end","type":"exact"},{"name":"reduced actin patch localization to non-growing cell end","type":"related"}],"termid":"FYPO:0001397"}


id: PBO:0001760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Faf1 (predicted)","termid":"PBO:0001760"}


id: PBO:0081430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 284","termid":"PBO:0081430"}


id: PBO:0046825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 3 pseudogene 2","termid":"PBO:0046825"}


id: PBO:0049376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 6","termid":"PBO:0049376"}


id: GO:0002648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of central tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of central tolerance induction","termid":"GO:0002646"},{"relation_name":"positively_regulates","term_name":"central tolerance induction","termid":"GO:0002508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of central tolerance induction","synonyms":[{"name":"activation of central tolerance induction","type":"narrow"},{"name":"stimulation of central tolerance induction","type":"narrow"},{"name":"up regulation of central tolerance induction","type":"exact"},{"name":"up-regulation of central tolerance induction","type":"exact"},{"name":"upregulation of central tolerance induction","type":"exact"}],"termid":"GO:0002648"}


id: PBO:0030159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin","termid":"PBO:0030159"}


id: MONDO:0000910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that has material basis in variation in the chromosome region Xp21.3-p21.2.","definition_xrefs":["PMID:2300556","DOID:0110413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 6","secondary_identifiers":["OMIM:312612","ICD10CM:H35.5","MEDGEN:333305","GARD:10377","UMLS:C1839368","MESH:C564065"],"synonyms":[{"name":"RP 6","type":"related"},{"name":"RP6","type":"exact"},{"name":"retinitis pigmentosa 6","type":"exact"},{"name":"retinitis pigmentosa type 6","type":"exact"},{"name":"retinitis pigmentosa, X-linked recessive, 6","type":"related"}],"termid":"MONDO:0000910","xrefs":{"Monarch":{"xref_id":"0000910"}}}


id: MONDO:1011198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypophosphatemic rickets in rabbits due to ablation of the DMP1 gene created using CRISPR/Cas9.","definition_xrefs":["OMIA:001542-9986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"rickets, non-human animal","termid":"MONDO:1011456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypophosphatemic rickets, DMP1-related, rabbit","synonyms":[{"name":"hypophosphatemic rickets, autosomal recessive, 1, rabbit","type":"related"}],"termid":"MONDO:1011198","xrefs":{"Monarch":{"xref_id":"1011198"}}}


id: PBO:0090726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L24","termid":"PBO:0090726"}


id: GO:0039504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the normal execution of the adaptive immune response of the host organism, an immune response based on directed amplification of specific receptors for antigen produced through a somatic diversification process, and allowing for enhanced response to subsequent exposures to the same antigen (immunological memory).","definition_xrefs":["GOC:bf","GOC:sp","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host immune response","termid":"GO:0052562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host adaptive immune response","synonyms":[{"name":"inhibition of host adaptive immune response by virus","type":"narrow"},{"name":"negative regulation of host adaptive immune response","type":"exact"},{"name":"negative regulation of host adaptive immunity","type":"exact"},{"name":"suppression by virus of host adaptive immune response","type":"narrow"},{"name":"suppression of host acquired immune response","type":"exact"}],"termid":"GO:0039504"}


id: PBO:0000343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PY motif","termid":"PBO:0000343"}


id: FYPO:0007429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation does not occur during a cellular response to DNA damage.","definition_xrefs":["PMID:15805471","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein degradation during cellular response to DNA damage","synonyms":[{"name":"abolished protein breakdown during cellular response to DNA damage","type":"exact"},{"name":"abolished protein catabolic process during cellular response to DNA damage","type":"exact"},{"name":"abolished protein catabolism during cellular response to DNA damage","type":"exact"},{"name":"abolished protein degradation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein degradation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein degradation abolished during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0007429"}


id: PBO:0005573
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Extragenic suppressor of KinetoChore","termid":"PBO:0005573"}


id: GO:0072100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of the ureteric bud such that there is a similar arrangement in form and relationship of parts along its anterior/posterior axis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of symmetry","termid":"GO:0009799"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in ureteric bud development","termid":"GO:0072099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of ureteric bud anterior/posterior symmetry","synonyms":[{"name":"specification of ureteric bud anterior/posterior asymmetry","type":"exact"}],"termid":"GO:0072100"}


id: PBO:0062202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily X member 2","termid":"PBO:0062202"}


id: PBO:0068829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 67, pseudogene","termid":"PBO:0068829"}


id: PBO:0043453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNN3 divergent transcript","termid":"PBO:0043453"}


id: PBO:0055361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2790","termid":"PBO:0055361"}


id: MONDO:0025712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema","termid":"MONDO:0019623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioedema, hereditary, 4","secondary_identifiers":["MEDGEN:1787336","OMIM:619360","UMLS:C5543503"],"synonyms":[{"name":"HAE4","type":"exact"}],"termid":"MONDO:0025712","xrefs":{"Monarch":{"xref_id":"0025712"}}}


id: GO:1990561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is deprived of copper ions.","definition_xrefs":["PMID:10593913","GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to copper ion starvation (obsolete GO:1990561)","termid":"GO:1990561"}


id: GO:0160214
data:
  {"annotated_genes":["SJAG_00053","SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90739,104725],"is_not":false,"summary":null,"term":"GO:0160214"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a plasma membrane with an endoplasmic reticulum membrane, via membrane lipid binding, to establish membrane contact sites and mediate exchange and communication.","definition_xrefs":["PMID:23041194","PMID:39239853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"endoplasmic reticulum-plasma membrane adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0160214","terms_by_termid":{"GO:0160214":null}}


id: GO:0006542
data:
  {"annotated_genes":["SJAG_00359"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71724],"is_not":false,"summary":null,"term":"GO:0006542"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glutamine, 2-amino-4-carbamoylbutanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine metabolic process","termid":"GO:0006541"},{"relation_name":"is_a","term_name":"glutamine family amino acid biosynthetic process","termid":"GO:0009084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00359":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"glutamine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLNSYN-PWY"],"synonyms":[{"name":"glutamine anabolism","type":"exact"},{"name":"glutamine biosynthesis","type":"exact"},{"name":"glutamine formation","type":"exact"},{"name":"glutamine synthesis","type":"exact"}],"termid":"GO:0006542","terms_by_termid":{"GO:0006542":null}}


id: MONDO:0017250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary airway malformation","termid":"MONDO:0016580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary airway malformation type 2","secondary_identifiers":["icd11.foundation:1921224131","Orphanet:280840","UMLS:C5437761","MEDGEN:1738105","GARD:21095"],"synonyms":[{"name":"CCAM type 2","type":"exact"},{"name":"CPAM type 2","type":"exact"},{"name":"congenital cystic adenomatoid malformation of the lung type 2","type":"exact"},{"name":"congenital cystic adenomatous malformation of the lung type 2","type":"exact"},{"name":"congenital cystic disease of the lung type 2","type":"exact"}],"termid":"MONDO:0017250","xrefs":{"Monarch":{"xref_id":"0017250"}}}


id: GO:0034835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-mercaptobenzothiazole + 1/2 O2 = 6-hydroxy-2-mercaptobenzothiazole.","definition_xrefs":["UM-BBD_reactionID:r1178"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-mercaptobenzothiazole monooxygenase activity (obsolete GO:0034835)","termid":"GO:0034835"}


id: PBO:0045531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene","termid":"PBO:0045531"}


id: PBO:0086650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole","termid":"PBO:0086650"}


id: PBO:0044992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diablo IAP-binding mitochondrial protein","termid":"PBO:0044992"}


id: GO:0099508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Voltage-gated ion channel activity, occurring in the presynaptic membrane, involved in regulation of presynaptic membrane potential. This is a key step in synaptic transmission, following the arrival of an action potential at the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated monoatomic ion channel activity","termid":"GO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential","synonyms":[{"name":"voltage gated ion channel activity involved in regulation of presynaptic membrane potential","type":"exact"},{"name":"voltage-dependent ion channel activity involved in regulation of pre-synaptic membrane potential","type":"exact"},{"name":"voltage-dependent ion channel activity involved in regulation of presynaptic membrane potential","type":"exact"},{"name":"voltage-gated ion channel activity involved in regulation of pre-synaptic membrane potential","type":"exact"},{"name":"voltage-gated ion channel activity involved in regulation of presynaptic membrane potential","type":"broad"}],"termid":"GO:0099508"}


id: MONDO:0030731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial thoracic aortic aneurysm and aortic dissection","termid":"MONDO:0019625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial thoracic 12","secondary_identifiers":["UMLS:C5676959","MEDGEN:1802657","OMIM:619825"],"synonyms":[{"name":"AAT12","type":"exact"},{"name":"aortic aneurysm, familial thoracic 12","type":"exact"}],"termid":"MONDO:0030731","xrefs":{"Monarch":{"xref_id":"0030731"}}}


id: MONDO:0017214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inborn error of vitamin B12 (cobalamin) metabolism characterized by recurrent ketoacidotic comas or transient vomiting, dehydration, hypotonia and intellectual deficit, which responds to vitamin B12. There are three types: cblA, cblB and cblD-variant 2 (cblDv2).","definition_xrefs":["Orphanet:28"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"methylmalonic acidemia","termid":"MONDO:0002012"},{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"},{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"vitamin B12-responsive methylmalonic acidemia","secondary_identifiers":["SCTID:69614003","UMLS:C0342720","GARD:12623","MEDGEN:575193"],"synonyms":[{"name":"adenosylcobalamin deficiency","type":"exact"},{"name":"vitamin B12-responsive methylmalonic aciduria","type":"exact"}],"termid":"MONDO:0017214","xrefs":{"Monarch":{"xref_id":"0017214"}}}


id: PBO:0087582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); APC/C is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; component of the platform domain of the APC/C, based on structural analysis; relative distribution to nuclear foci decreases upon DNA replication stress","termid":"PBO:0087582"}


id: GO:0090723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a growth cone, the migrating motile tip of a growing nerve cell axon or dendrite.","definition_xrefs":["GOC:sl","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete growth cone part (obsolete GO:0090723)","termid":"GO:0090723"}


id: GO:0070533
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the BRCA1-BARD1 heterodimer, CtIP and Mre11/Rad50/NBS1 (M/R/N) complex, and binds to DNA at DNA damage sites. BRCA1-C binding ta damaged DNA is required for DNA damage-induced Chk1 phosphorylation and the G2/M transition checkpoint.","definition_xrefs":["GOC:mah","PMID:16391231","PMID:15485915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"BRCA1-C complex","termid":"GO:0070533"}


id: MONDO:0006997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease of the tibial nerve (also referred to as the posterior tibial nerve). The most commonly associated condition is the tarsal tunnel syndrome. However, leg injuries; ischemia; and inflammatory conditions (e.g., collagen diseases) may also affect the nerve. Clinical features include paralysis of plantar flexion, ankle inversion and toe flexion as well as loss of sensation over the sole of the foot. (From Joynt, Clinical Neurology, 1995, Ch51, p32)","definition_xrefs":["MESH:D020429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"tibial neuropathy","secondary_identifiers":["DOID:1187","MEDGEN:148422","UMLS:C0751932","SCTID:399076001"],"synonyms":[{"name":"Posterior tibial neuropathy","type":"exact"},{"name":"tibial neuropathy (disorder) [ambiguous]","type":"exact"}],"termid":"MONDO:0006997","xrefs":{"Monarch":{"xref_id":"0006997"}}}


id: GO:0010772
data:
  {"annotated_genes":["SJAG_01708","SJAG_03221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108025,110674],"is_not":false,"summary":null,"term":"GO:0010772"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of strand exchange proteins (recombinases) to form higher order oligomers on single-stranded DNA resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA recombinase assembly","termid":"GO:0000707"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01708":null,"SJAG_03221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0044085","GO:0006310","GO:0007049","GO:0006259","GO:0140013","GO:0008150","GO:0065003","GO:0006281"],"is_obsolete":false,"name":"meiotic DNA recombinase assembly involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010772","terms_by_termid":{"GO:0010772":null}}


id: PBO:0075683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid receptor RNA activator 1","termid":"PBO:0075683"}


id: GO:0046978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the TAP1 subunit of TAP (transporter associated with antigen processing) protein.","definition_xrefs":["PMID:11133832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TAP binding","termid":"GO:0046977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"TAP1 binding","termid":"GO:0046978"}


id: MONDO:0002549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schwannoma that involves the hypoglossal nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schwannoma","termid":"MONDO:0002546"},{"relation_name":"is_a","term_name":"hypoglossal nerve neoplasm","termid":"MONDO:0002550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schwannoma of twelfth cranial nerve","secondary_identifiers":["DOID:3197","NCIT:C5434","MEDGEN:235581","UMLS:C1335928"],"synonyms":[{"name":"hypoglossal nerve neurilemmoma","type":"exact"},{"name":"hypoglossal nerve schwannoma","type":"exact"},{"name":"hypoglossal neurilemmoma","type":"exact"},{"name":"hypoglossal schwannoma","type":"exact"},{"name":"neurilemmoma of hypoglossal nerve","type":"exact"},{"name":"neurilemmoma of the hypoglossal nerve","type":"exact"},{"name":"neurilemmoma of the twelfth cranial nerve","type":"exact"},{"name":"neurilemmoma of twelfth cranial nerve","type":"exact"},{"name":"schwannoma of hypoglossal nerve","type":"exact"},{"name":"schwannoma of the hypoglossal nerve","type":"exact"},{"name":"schwannoma of the twelfth cranial nerve","type":"exact"},{"name":"schwannoma of twelfth cranial nerve","type":"exact"},{"name":"twelfth cranial nerve neurilemmoma","type":"exact"},{"name":"twelfth cranial nerve schwannoma","type":"exact"}],"termid":"MONDO:0002549","xrefs":{"Monarch":{"xref_id":"0002549"}}}


id: MONDO:0016017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Methimazole embryopathy is a teratogenic embryofetopathy that results from maternal exposition to methimazole (MMI; or the parent compound carbimazole) in the first trimester of pregnancy. MMI is an antithyroid thionamide drug used for the treatment of Graves' disease. In the infant, MMI may result in choanal atresia, esophageal atresia, omphalocele, omphalomesenteric duct anomalies, congenital heart disease (such as ventricular septal defect), renal system malformations and aplasia cutis. Additional features that may be observed include facial dysmorphism (short upslanting palpebral fissures, a broad nasal bridge with a small nose and a broad forehead) and athelia/hypothelia.","definition_xrefs":["Orphanet:1923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methimazole embryofetopathy","secondary_identifiers":["SCTID:724144006","UMLS:C4510379","MEDGEN:1388574","icd11.foundation:1204409156"],"synonyms":[{"name":"MMI/CMZ embryofetopathy","type":"exact"},{"name":"MMI/CMZ embryopathy","type":"exact"},{"name":"Methimazole antenatal exposure","type":"related"},{"name":"Methimazole/carbimazole embryofetopathy","type":"exact"},{"name":"Methimazole/carbimazole embryopathy","type":"exact"},{"name":"fetal methimazole syndrome","type":"related"},{"name":"foetal methimazole syndrome","type":"related"},{"name":"methimazole embryofetopathy","type":"exact"}],"termid":"MONDO:0016017","xrefs":{"Monarch":{"xref_id":"0016017"}}}


id: PBO:0080443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrae development associated","termid":"PBO:0080443"}


id: MONDO:0020733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"proximal symphalangism","termid":"MONDO:0008511"},{"relation_name":"is_a","term_name":"NOG-related symphalangism spectrum disorder","termid":"MONDO:0100521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"proximal symphalangism 1A","secondary_identifiers":["DOID:0080787","UMLS:C3714899","MEDGEN:811492","OMIM:185800"],"synonyms":[{"name":"Cushing symphalangism","type":"related"},{"name":"SYM1A","type":"related"},{"name":"Sym1","type":"related"},{"name":"hereditary absence of the proximal interphalangeal joints","type":"related"},{"name":"symphalangism, proximal, 1A","type":"related"},{"name":"symphalangism, proximal, type 1A","type":"related"}],"termid":"MONDO:0020733","xrefs":{"Monarch":{"xref_id":"0020733"}}}


id: MONDO:0015033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cerebral hemorrhage with amyloidosis, Dutch type (HCHWA-D) is a form of HCHWA, a group of familial central nervous system disorders, characterized by severe cerebral amyloid angiopathy (CAA), hemorrhagic and non-hemorrhagic strokes and dementia.","definition_xrefs":["Orphanet:100006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral amyloid angiopathy, APP-related","termid":"MONDO:0011583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"ABeta amyloidosis, dutch type","secondary_identifiers":["UMLS:C2931672","GARD:16929","ICD10EXP:E85.4+","ICD10EXP:I68.0*","SCTID:56453003","ICD9:277.39","MEDGEN:419468"],"synonyms":[{"name":"ABetaE22Q amyloidosis","type":"exact"},{"name":"HCHWA, Dutch type","type":"exact"},{"name":"HCHWA-D","type":"exact"},{"name":"cerebral amyloid angiopathy, APP-related, Dutch variant","type":"exact"},{"name":"hereditary cerebral haemorrhage with amyloidosis, Dutch type","type":"exact"},{"name":"hereditary cerebral hemorrhage with amyloidosis, Dutch type","type":"exact"}],"termid":"MONDO:0015033","xrefs":{"Monarch":{"xref_id":"0015033"}}}


id: GO:0020015
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded organelle found in organisms from the order Kinetoplastida that houses the enzymes of glycolysis.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005777","GO:0005575"],"is_obsolete":false,"name":"glycosome","secondary_identifiers":["Wikipedia:Glycosome"],"termid":"GO:0020015"}


id: MOD:01471
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to (Z)-dehydrobutyrine.","definition_xrefs":["DeltaMass:0","PubMed:1547888","RESID:AA0182","PubMed:3769923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrobutyrine (Thr)","termid":"MOD:00190"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(Z)-dehydrobutyrine (Thr)","synonyms":[{"name":"(2Z)-2-aminobut-2-enoic acid","type":"exact"},{"name":"(Z)-2-amino-2-butenoic acid","type":"exact"},{"name":"(Z)-2-aminobutenoic acid","type":"exact"},{"name":"(Z)-dehydrobutyrine","type":"exact"},{"name":"(Z)dHAbu","type":"exact"},{"name":"2,3-didehydrobutyrine","type":"exact"},{"name":"3-methyldehydroalanine","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dehydration","type":"related"},{"name":"Dehydroamino butyric acid","type":"exact"},{"name":"Dhb","type":"exact"},{"name":"MOD_RES (Z)-2,3-didehydrobutyrine","type":"exact"},{"name":"alpha,beta-dehydroaminobutyric acid","type":"exact"},{"name":"anhydrothreonine","type":"exact"},{"name":"methyl-dehydroalanine","type":"exact"}],"termid":"MOD:01471"}


id: PBO:0030562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_tryptophan_level","termid":"PBO:0030562"}


id: MONDO:0018221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immune hydrops fetalis (IHF), a form of HF, describes the excessive accumulation of fetal fluid within the fetal extravascular compartments and body cavities due to maternal rhesus (Rh) incompatibility.","definition_xrefs":["Orphanet:364013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrops fetalis","termid":"MONDO:0015193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immune hydrops fetalis","secondary_identifiers":["SCTID:15539009","icd11.foundation:1589938690","GARD:21561","ICD9:773.3","NCIT:C111904","UMLS:C0455990","MEDGEN:105328"],"synonyms":[{"name":"IHF","type":"exact"},{"name":"immune HF","type":"exact"},{"name":"immune fetal edema","type":"exact"},{"name":"immune fetal hydrops","type":"exact"},{"name":"immune foetal hydrops","type":"exact"},{"name":"immune foetal oedema","type":"exact"}],"termid":"MONDO:0018221","xrefs":{"Monarch":{"xref_id":"0018221"}}}


id: PBO:0075700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREK1 interacting protein 1","termid":"PBO:0075700"}


id: MOD:01256
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to 3-methyl-S-(2-sulfanylethyl)cysteine.","definition_xrefs":["PubMed:11507762","Unimod:200#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,2-ethanedithiol modified residue","termid":"MOD:00553"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-S-(2-sulfanylethyl)cysteine (Thr)","synonyms":[{"name":"EDT","type":"related"},{"name":"Ethanedithiol","type":"related"},{"name":"beta-methyl-S-(2-mercaptoethyl)cysteine","type":"exact"}],"termid":"MOD:01256"}


id: PBO:0046502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERI1 exoribonuclease family member 3","termid":"PBO:0046502"}


id: PBO:0090277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exonuclease, C-terminal domain superfamily","termid":"PBO:0090277"}


id: PATO:0002236
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Shape quality inhering in a bearer by virtue of the bearer's being shaped like a wing.","direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aliform","synonyms":[{"name":"wing-shaped","type":"exact"}],"termid":"PATO:0002236"}


id: GO:1903516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single strand break repair.","definition_xrefs":["GOC:TermGenie","PMID:17395247","GO_REF:0000058","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA repair","termid":"GO:0006282"},{"relation_name":"regulates","term_name":"single strand break repair","termid":"GO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"regulation of single strand break repair","termid":"GO:1903516"}


id: GO:0070853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class VI myosin. The myosin VI heavy chain has a single IQ motif in the neck and a tail region with a coiled coil domain followed by a unique globular domain, a unique insertion that enables myosin VI to move towards the pointed or minus end of actin filaments.","definition_xrefs":["GOC:mah","PMID:15473855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0008092","GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"myosin VI binding","termid":"GO:0070853"}


id: MONDO:0025087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute, highly contagious disease affecting swine of all ages and caused by the classical swine fever virus. It has a sudden onset with high morbidity and mortality.","definition_xrefs":["MESH:D006691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"pestivirus infectious disease, non-human animal","termid":"MONDO:0700203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"classical swine fever","synonyms":[{"name":"Hog cholera","type":"related"},{"name":"cholera, Hog","type":"related"},{"name":"swine fever","type":"related"},{"name":"swine fever, classical","type":"related"}],"termid":"MONDO:0025087","xrefs":{"Monarch":{"xref_id":"0025087"}}}


id: PBO:0050996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFT122 pseudogene 3","termid":"PBO:0050996"}


id: PBO:0076723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional and immune response regulator","termid":"PBO:0076723"}


id: PBO:0034594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA/DNA_annealing_activity","termid":"PBO:0034594"}


id: GO:0044317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized neuron projection which is the site of synaptic transmission produced by retinal rod cells. Rod spherules are small round enlargements of the axon (3-5 micrometers diameter) or even extensions of the cell body.","definition_xrefs":["PMID:26930660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rod spherule","synonyms":[{"name":"rod cell spherule","type":"exact"},{"name":"rod photoreceptor spherule","type":"exact"}],"termid":"GO:0044317"}


id: PBO:0070819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 49","termid":"PBO:0070819"}


id: GO:1901337
data:
  {"annotated_genes":["SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"}]},"cv_name":"biological_process","definition":"The directed movement of a thioester into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"thioester transport","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:1901337","terms_by_termid":{"GO:0035348":null}}


id: PATO:0000541
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000541 photosensitivity value (obsolete PATO:0000541)","termid":"PATO:0000541"}


id: GO:0160058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a plant endodermal cell.","definition_xrefs":["PMID:21735349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant endodermal cell differentiation","termid":"GO:0160058"}


id: GO:0006806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete insecticide resistance (obsolete GO:0006806)","synonyms":[{"name":"insecticide resistance","type":"exact"}],"termid":"GO:0006806"}


id: PBO:0086150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for nuclear migration; component of the mitochondria-ER-cortex-anchor (MECA); required for the association of mitochondria with the cell cortex and for accurate distribution of mitochondrial network; interacts with Mdm36p to link the ER and mitochondria at the cortex; localizes to the mother cell cortex and the bud tip; may mediate interactions of dynein and cytoplasmic microtubules with the cell cortex","termid":"PBO:0086150"}


id: GO:0044590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to iron molybdenum cofactor, the cofactor located at the active site of the molybdenum nitrogenase.","definition_xrefs":["GOC:mengo_curators","GOC:tt","PMID:18429691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"iron-sulfur-molybdenum cofactor binding","synonyms":[{"name":"FeMo co binding","type":"exact"},{"name":"FeMoco binding","type":"exact"}],"termid":"GO:0044590"}


id: GO:0071682
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an endocytic vesicle.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"endocytic vesicle","termid":"GO:0030139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"endocytic vesicle lumen","termid":"GO:0071682"}


id: MONDO:1010561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spina bifida occulta that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida occulta, non-human animal","termid":"MONDO:1010048"},{"relation_name":"is_a","term_name":"spina bifida, dog","termid":"MONDO:1010556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida occulta, dog","secondary_identifiers":["OMIA:000934-9615"],"termid":"MONDO:1010561","xrefs":{"Monarch":{"xref_id":"1010561"}}}


id: PBO:0057559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 708","termid":"PBO:0057559"}


id: MONDO:0000449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Opitz-GBBB syndrome (obsolete MONDO:0000449)","termid":"MONDO:0000449","xrefs":{"Monarch":{"xref_id":"0000449"}}}


id: GO:0000340
data:
  {"annotated_genes":["SJAG_04360","SJAG_03223","SJAG_00507","SJAG_01625","SJAG_01830"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65731,74464,75176,80003,100111],"is_not":false,"summary":null,"term":"GO:0000340"}]},"cv_name":"molecular_function","definition":"Binding to a 7-methylguanosine group added cotranscriptionally to the 5' end of RNA molecules transcribed by polymerase II.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding","termid":"GO:0000339"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00507":null,"SJAG_01625":null,"SJAG_01830":null,"SJAG_03223":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"RNA 7-methylguanosine cap binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA m7G cap binding","type":"exact"}],"termid":"GO:0000340","terms_by_termid":{"GO:0000340":null}}


id: PBO:0040231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 4 pseudogene 3","termid":"PBO:0040231"}


id: MOD:01805
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-aspartic acid residue and a glycine residue by an isopeptide bond with formation of N-(L-isoaspartyl)-glycine and the release of water.","definition_xrefs":["PubMed:1826288","ChEBI:21479","PubMed:18671394","RESID:AA0126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"N-(L-isoaspartyl)-glycine","termid":"MOD:01928"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(L-isoaspartyl)-glycine (Asp)","synonyms":[{"name":"(2S)-2-amino-4-(carboxymethyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"2-amino-N4-(carboxymethyl)-butanediamic acid","type":"exact"},{"name":"CROSSLNK Isoaspartyl glycine isopeptide (Asp-Gly)","type":"exact"},{"name":"CROSSLNK Isoaspartyl glycine isopeptide (Gly-Asp)","type":"exact"},{"name":"N-(L-isoaspartyl)-glycine","type":"exact"},{"name":"N-beta-aspartylglycine","type":"exact"},{"name":"N4-(carboxymethyl)-asparagine","type":"exact"},{"name":"isoaspartyl glycine","type":"exact"}],"termid":"MOD:01805"}


id: PBO:0068522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 117, pseudogene","termid":"PBO:0068522"}


id: FYPO:0002749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-asparagine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular asparagine level","synonyms":[{"name":"decreased cellular L-asparagine level","type":"exact"},{"name":"decreased cellular asparagine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular asparagine level during vegetative growth","type":"exact"},{"name":"decreased level of asparagine in cell","type":"exact"},{"name":"reduced cellular asparagine level","type":"exact"},{"name":"reduced level of asparagine in cell","type":"exact"}],"termid":"FYPO:0002749"}


id: GO:1904934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation in midbrain.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf","PMID:18953410","PMID:24431302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation in midbrain","termid":"GO:1904933"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"cell proliferation in midbrain","termid":"GO:0033278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation in midbrain","synonyms":[{"name":"down regulation of cell proliferation in mesencephalon","type":"exact"},{"name":"down regulation of cell proliferation in midbrain","type":"exact"},{"name":"down regulation of mesencepahalic cell proliferation","type":"related"},{"name":"down-regulation of cell proliferation in mesencephalon","type":"exact"},{"name":"down-regulation of cell proliferation in midbrain","type":"exact"},{"name":"down-regulation of mesencepahalic cell proliferation","type":"related"},{"name":"downregulation of cell proliferation in mesencephalon","type":"exact"},{"name":"downregulation of cell proliferation in midbrain","type":"exact"},{"name":"downregulation of mesencepahalic cell proliferation","type":"related"},{"name":"inhibition of cell proliferation in mesencephalon","type":"narrow"},{"name":"inhibition of cell proliferation in midbrain","type":"narrow"},{"name":"inhibition of mesencepahalic cell proliferation","type":"related"},{"name":"negative regulation of cell proliferation in mesencephalon","type":"exact"},{"name":"negative regulation of mesencepahalic cell proliferation","type":"related"}],"termid":"GO:1904934"}


id: PBO:0043765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly homolog COX15","termid":"PBO:0043765"}


id: PBO:0017616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med6","termid":"PBO:0017616"}


id: MONDO:0000061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete microcephaly, primary, autosomal recessive (obsolete MONDO:0000061)","termid":"MONDO:0000061","xrefs":{"Monarch":{"xref_id":"0000061"}}}


id: PBO:0049226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 7","termid":"PBO:0049226"}


id: MOD:00091
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to L-arginine amide.","definition_xrefs":["ChEBI:145897","RESID:AA0082","PubMed:2753890","PubMed:2229025","PubMed:743209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-arginine amide","synonyms":[{"name":"(2S)-2-amino-5-[(diaminomethylidene)amino]pentanamide","type":"exact"},{"name":"2-amino-5-carbamimidamidopentanamide","type":"exact"},{"name":"2-amino-5-guanidinopentanamide","type":"exact"},{"name":"ArgN","type":"exact"},{"name":"L-arginine amide","type":"exact"},{"name":"MOD_RES Arginine amide","type":"exact"},{"name":"amidated L-arginine","type":"exact"},{"name":"argininamide","type":"exact"}],"termid":"MOD:00091"}


id: PBO:0017091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 6","termid":"PBO:0017091"}


id: GO:0050116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N-dimethylformamide + H2O = dimethylamine + formate.","definition_xrefs":["EC:3.5.1.56","RHEA:19517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"N,N-dimethylformamidase activity","secondary_identifiers":["MetaCyc:NN-DIMETHYLFORMAMIDASE-RXN","KEGG_REACTION:R02509"],"synonyms":[{"name":"DMFase activity","type":"related"},{"name":"N,N-dimethylformamide amidohydrolase activity","type":"related"},{"name":"dimethylformamidase activity","type":"related"}],"termid":"GO:0050116"}


id: FYPO:0008141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal during the second meiotic nuclear division. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:16272747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiosis","termid":"FYPO:0002959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during meiosis II","synonyms":[{"name":"decreased RNA accumulation during meiosis II","type":"related"},{"name":"decreased RNA level during second meiotic nuclear division","type":"exact"},{"name":"decreased transcript level during meiosis II","type":"exact"},{"name":"reduced RNA level during meiosis II","type":"exact"}],"termid":"FYPO:0008141"}


id: GO:0042166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to acetylcholine, an acetic acid ester of the organic base choline that functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"acetylcholine binding","termid":"GO:0042166"}


id: SO:0000231
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a small nuclear RNA (SO:0000274).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNA_primary_transcript","synonyms":[{"name":"snRNA primary transcript","type":"exact"}],"termid":"SO:0000231"}


id: PBO:0029151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_paraquat","termid":"PBO:0029151"}


id: GO:0047058
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-2-methyl-3-phytyl-2,3-dihydronaphthoquinone + oxidized dithiothreitol + H2O = 2,3-epoxy-2,3-dihydro-2-methyl-3-phytyl-1,4-naphthoquinone + 1,4-dithiothreitol.","definition_xrefs":["RHEA:21560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor","termid":"GO:0016728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"vitamin-K-epoxide reductase (warfarin-insensitive) activity","secondary_identifiers":["MetaCyc:1.1.4.2-RXN","EC:1.17.4.5"],"synonyms":[{"name":"vitamin K 2,3-epoxide reductase activity","type":"related"}],"termid":"GO:0047058"}


id: FYPO:0005639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to iron ion starvation is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during cellular response to iron ion starvation","synonyms":[{"name":"normal RNA accumulation during cellular response to iron ion starvation","type":"related"},{"name":"normal RNA level during cellular response to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to iron ion starvation during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to iron starvation","type":"exact"},{"name":"normal RNA level during iron ion starvation","type":"exact"},{"name":"normal mRNA level during cellular response to iron ion starvation","type":"narrow"},{"name":"normal transcript level during cellular response to iron ion starvation","type":"exact"}],"termid":"FYPO:0005639"}


id: PBO:0055244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2671","termid":"PBO:0055244"}


id: PBO:0045495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSEL antisense RNA 1","termid":"PBO:0045495"}


id: PBO:0080103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP14C small subunit processome component","termid":"PBO:0080103"}


id: GO:0102727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: campest-4-en-3beta-ol + NAD = campest-4-en-3-one + NADH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3beta-hydroxysteroid dehydrogenase activity (obsolete GO:0102727)","termid":"GO:0102727"}


id: GO:1900183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xanthone-containing compound biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"regulates","term_name":"xanthone-containing compound biosynthetic process","termid":"GO:2001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of xanthone-containing compound biosynthetic process","synonyms":[{"name":"regulation of xanthone biosynthesis","type":"narrow"},{"name":"regulation of xanthone biosynthetic process","type":"narrow"},{"name":"regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"regulation of xanthone-containing compound formation","type":"exact"},{"name":"regulation of xanthone-containing compound synthesis","type":"exact"}],"termid":"GO:1900183"}


id: PBO:0041707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2 pseudogene 2","termid":"PBO:0041707"}


id: PR:O43026
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpd3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.12","synonyms":[{"name":"GAPDH 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gpd3","type":"exact"}],"termid":"PR:O43026"}


id: MONDO:0015873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paget disease of the nipple describes a rare presentation of breast cancer, seen most frequently in women aged 50-60, manifesting with nipple drainage and itching, erythema, crusty and excoriated nipple, thickened plaques, and hyperpigmentation (less frequently). It is due to tumor cells invading the nipple-areola complex and represents 1-3% of all new breast cancer diagnoses.","definition_xrefs":["Orphanet:180275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary Paget disease","termid":"MONDO:0002648"},{"relation_name":"is_a","term_name":"nipple carcinoma","termid":"MONDO:0003950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Paget disease of the nipple","secondary_identifiers":["ONCOTREE:PD","MedDRA:10033367","SCTID:403946000","GARD:7303","NCIT:C3301","MEDGEN:352830","UMLS:C1704323","icd11.foundation:1295910447","NORD:1544"],"synonyms":[{"name":"PD","type":"related"},{"name":"Paget disease of the breast","type":"broad"},{"name":"Paget disease of the nipple","type":"exact"},{"name":"Paget's Disease of the Breast","type":"exact"},{"name":"Paget's disease of nipple","type":"exact"},{"name":"Paget's disease of the nipple","type":"exact"},{"name":"Paget's disease, mammary","type":"related"},{"name":"mammary Paget disease","type":"broad"},{"name":"nipple Paget's disease","type":"exact"}],"termid":"MONDO:0015873","xrefs":{"Monarch":{"xref_id":"0015873"}}}


id: GO:0160188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a sterol from one side of a membrane to the other according to the reaction: H+(out) + sterol(in) = H+(in) + sterol(out).","definition_xrefs":["PMID:31543266"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol:proton antiporter activity (obsolete GO:0160188)","termid":"GO:0160188"}


id: PBO:0090351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial D-lactate dehydrogenase, cytochrome Dld2","termid":"PBO:0090351"}


id: PBO:0071337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L28 pseudogene 1","termid":"PBO:0071337"}


id: MONDO:0015363
data:
  {"annotated_genes":["SJAG_05289","SJAG_00459","SJAG_03598","SJAG_03495","SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011436"},{"annotations":[85478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011585"},{"annotations":[85681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030055"},{"annotations":[86662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957874"},{"annotations":[86210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859279"}]},"cv_name":"mondo","definition":"Autosomal recessive form of distal hereditary motor neuropathy.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"distal hereditary motor neuropathy","termid":"MONDO:0018894"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00237":null,"SJAG_00459":null,"SJAG_03495":null,"SJAG_03598":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5548369","MEDGEN:1779821","DOID:0111197","GARD:19927","OMIMPS:604320","Orphanet:140468"],"synonyms":[{"name":"autosomal recessive dHMN","type":"exact"},{"name":"autosomal recessive dSMA","type":"exact"},{"name":"autosomal recessive distal hereditary motor neuropathy","type":"exact"},{"name":"autosomal recessive distal spinal muscular atrophy","type":"exact"},{"name":"distal hereditary motor neuropathy, autosomal recessive","type":"exact"}],"termid":"MONDO:0015363","terms_by_termid":{"MONDO:0011436":null,"MONDO:0011585":null,"MONDO:0030055":null,"MONDO:0859279":null,"MONDO:0957874":null},"xrefs":{"Monarch":{"xref_id":"0015363"}}}


id: MONDO:0005399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Occlusion of the lumen of a vein by a thrombus that has migrated from a distal site via the blood stream.","definition_xrefs":["NCIT:C99537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"venous thromboembolism","secondary_identifiers":["EFO:0004286","MESH:D054556","icd11.foundation:1197943614","MEDGEN:348285","UMLS:C1861172"],"synonyms":[{"name":"venous thromboembolism","type":"exact"}],"termid":"MONDO:0005399","xrefs":{"Monarch":{"xref_id":"0005399"}}}


id: GO:0009258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"10-formyltetrahydrofolate metabolic process","termid":"GO:0009256"},{"relation_name":"is_a","term_name":"folic acid-containing compound catabolic process","termid":"GO:0009397"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"10-formyltetrahydrofolate catabolic process","synonyms":[{"name":"10-formyl-THF catabolic process","type":"exact"},{"name":"10-formyl-THF catabolism","type":"exact"},{"name":"10-formyltetrahydrofolate breakdown","type":"exact"},{"name":"10-formyltetrahydrofolate catabolism","type":"exact"},{"name":"10-formyltetrahydrofolate degradation","type":"exact"}],"termid":"GO:0009258"}


id: GO:0002688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte chemotaxis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte migration","termid":"GO:0002685"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"leukocyte chemotaxis","termid":"GO:0030595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte chemotaxis","synonyms":[{"name":"regulation of immune cell chemotaxis","type":"exact"},{"name":"regulation of leucocyte chemotaxis","type":"exact"}],"termid":"GO:0002688"}


id: PBO:0048925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member V, pseudogene","termid":"PBO:0048925"}


id: PBO:0048736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate dehydrogenase 1 pseudogene 9","termid":"PBO:0048736"}


id: PBO:0075244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 14","termid":"PBO:0075244"}


id: PBO:0004694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane exchange factor subunit Sat1 (predicted)","termid":"PBO:0004694"}


id: MONDO:0859327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 110","secondary_identifiers":["DOID:0070395","MEDGEN:1824038","UMLS:C5774265","OMIM:620149"],"termid":"MONDO:0859327","xrefs":{"Monarch":{"xref_id":"0859327"}}}


id: MONDO:0006676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Beriberi is a condition that occurs in people who are deficient in thiamine (vitamin B1). There are two major types of beriberi: wet beriberi which affects the cardiovascular system and dry beriberi which affects the nervous system. People with wet beriberi may experience increased heart rate, shortness of breath, and swelling of the lower legs. Signs and symptoms of dry beriberi include difficulty walking; loss of feeling in the hands and/or feet; paralysis of the lower legs; mental confusion; speech difficulty; pain; and/or vomiting. Beriberi is rare in the United States since many foods are now vitamin enriched; however, alcohol abuse, dialysis and taking high doses of diuretics increases the risk of developing the condition. In most cases,beriberi occurs sporadically in people with no family history of the condition. A rare condition known as genetic beriberi is inherited (passed down through families) and is associated with an inability to absorb thiamine from foods. Treatment generally includes thiamine supplementation, given by injection or taken by mouth.","direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B deficiency","termid":"MONDO:0042976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beriberi","secondary_identifiers":["UMLS:C0005122","ICD9:265.0","MESH:D001602","DOID:13725","EFO:1000837","MedDRA:10004482","MEDGEN:543","icd11.foundation:632832064","DOID:0070313","NCIT:C34418","SCTID:36656008"],"synonyms":[{"name":"Beri Beri","type":"exact"},{"name":"thiamine deficiency","type":"exact"},{"name":"vitamin B1 deficiency","type":"exact"}],"termid":"MONDO:0006676","xrefs":{"Monarch":{"xref_id":"0006676"}}}


id: PBO:0056311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP2K5 divergent transcript","termid":"PBO:0056311"}


id: PATO:0001697
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A photosensitivity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"photosensitive","termid":"PATO:0000547"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased photosensitivity","synonyms":[{"name":"low photosensitivity","type":"exact"}],"termid":"PATO:0001697"}


id: PBO:0078361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 6-1","termid":"PBO:0078361"}


id: GO:0006890
data:
  {"annotated_genes":["SJAG_05030","SJAG_04701","SJAG_01166","SJAG_01516","SJAG_02418","SJAG_04474","SJAG_02204","SJAG_02419","SJAG_01940","SJAG_04402","SJAG_03499","SJAG_05209","SJAG_04569","SJAG_04391","SJAG_00192","SJAG_04592","SJAG_02482","SJAG_04956","SJAG_01927","SJAG_04070","SJAG_02234","SJAG_04340","SJAG_00557","SJAG_02586","SJAG_03933","SJAG_01508"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64430,66011,67319,69324,71279,71338,71656,72636,73111,73882,74247,75677,75901,76976,77955,78233,78382,90897,93228,93563,98080,98786,98877,99807,114013],"is_not":false,"summary":null,"term":"GO:0006890"},{"annotations":[114005],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000156"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG.","definition_xrefs":["ISBN:0716731363","PMID:16510524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00557":null,"SJAG_01166":null,"SJAG_01508":null,"SJAG_01516":null,"SJAG_01927":null,"SJAG_01940":null,"SJAG_02204":null,"SJAG_02234":null,"SJAG_02418":null,"SJAG_02419":null,"SJAG_02482":null,"SJAG_02586":null,"SJAG_03499":null,"SJAG_03933":null,"SJAG_04070":null,"SJAG_04340":null,"SJAG_04391":null,"SJAG_04402":null,"SJAG_04474":null,"SJAG_04569":null,"SJAG_04592":null,"SJAG_04701":null,"SJAG_04956":null,"SJAG_05030":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0051179"],"is_obsolete":false,"name":"retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0048220","Reactome:R-HSA-6811434"],"synonyms":[{"name":"cis-Golgi to rough ER transport","type":"exact"},{"name":"cis-Golgi to rough ER vesicle-mediated transport","type":"exact"},{"name":"cis-Golgi to rough endoplasmic reticulum transport","type":"exact"},{"name":"cis-Golgi to rough endoplasmic reticulum vesicle-mediated transport","type":"exact"},{"name":"retrograde (Golgi to ER) transport","type":"exact"},{"name":"retrograde transport, Golgi to ER","type":"exact"},{"name":"retrograde transport, Golgi to endoplasmic reticulum","type":"exact"},{"name":"retrograde vesicle-mediated transport, Golgi to ER","type":"exact"}],"termid":"GO:0006890","terms_by_termid":{"GO:0006890":null,"GO:2000156":null}}


id: PBO:0074806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13 pseudogene 1","termid":"PBO:0074806"}


id: PBO:0040450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 10D (putative)","termid":"PBO:0040450"}


id: SO:0100016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The central, hydrophobic region of the signal peptide (approx 7-15 aa).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"},{"relation_name":"part_of","term_name":"signal_peptide","termid":"SO:0000418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"central_hydrophobic_region_of_signal_peptide","synonyms":[{"name":"H-region","type":"related"},{"name":"central hydrophobic region of signal peptide","type":"exact"},{"name":"central_hydrophobic_region","type":"related"}],"termid":"SO:0100016"}


id: MONDO:0019282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic hair shaft abnormality (obsolete MONDO:0019282)","secondary_identifiers":["Orphanet:79367"],"termid":"MONDO:0019282","xrefs":{"Monarch":{"xref_id":"0019282"}}}


id: GO:0019543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propionate, the anion derived from propionic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"},{"relation_name":"is_a","term_name":"short-chain fatty acid catabolic process","termid":"GO:0019626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"propionate catabolic process","synonyms":[{"name":"propionate breakdown","type":"exact"},{"name":"propionate catabolism","type":"exact"},{"name":"propionate degradation","type":"exact"}],"termid":"GO:0019543"}


id: MONDO:0044753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spinal stenosis that involves the lumbar region of vertebral column.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal stenosis","termid":"MONDO:0005965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumbar spinal stenosis","secondary_identifiers":["HP:0004610","SCTID:18347007","ICD9:724.02","MEDGEN:488791","UMLS:C0158288","NCIT:C177445"],"synonyms":[{"name":"lumbar region of vertebral column spinal stenosis","type":"exact"},{"name":"lumbar spinal stenosis","type":"exact"},{"name":"spinal stenosis of lumbar region","type":"exact"},{"name":"spinal stenosis of lumbar region of vertebral column","type":"exact"}],"termid":"MONDO:0044753","xrefs":{"Monarch":{"xref_id":"0044753"}}}


id: PR:G2TRK1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A5.19 gene.","definition_xrefs":["UniProtKB:G2TRK1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17A5.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.19","synonyms":[{"name":"Spom972h-SPAC17A5.19","type":"exact"}],"termid":"PR:G2TRK1"}


id: GO:0003213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the right cardiac atrium is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac atrium morphogenesis","termid":"GO:0003209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac right atrium morphogenesis","termid":"GO:0003213"}


id: PBO:0066790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 89","termid":"PBO:0066790"}


id: GO:0003099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process which increases the force of heart muscle contraction mediated by chemical signaling, hormonal, autocrine or paracrine.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of the force of heart contraction by chemical signal","termid":"GO:0003057"},{"relation_name":"is_a","term_name":"positive regulation of heart contraction","termid":"GO:0045823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by chemical signal","synonyms":[{"name":"positive regulation of the force of heart muscle contraction by chemical signal","type":"exact"}],"termid":"GO:0003099"}


id: PBO:0000729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-saccharopine oxidase","termid":"PBO:0000729"}


id: PBO:0052729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 21","termid":"PBO:0052729"}


id: PBO:0088279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPPDE peptidase family deubiquitinase/desumoylase Sdu1","termid":"PBO:0088279"}


id: PBO:0073727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 8","termid":"PBO:0073727"}


id: PBO:0045579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 1","termid":"PBO:0045579"}


id: PBO:0086698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localizes to the membrane fraction; possible Zap1p-regulated target gene induced by zinc deficiency; YJL132W is a non-essential gene","termid":"PBO:0086698"}


id: GO:0060002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A motor activity that generates movement along a microfilament towards the plus end, driven by ATP hydrolysis. The minus end of an actin filament is the end that does not preferentially add actin monomers.","definition_xrefs":["PMID:10519557","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microfilament motor activity","termid":"GO:0000146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003774"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824","GO:0003774"],"is_obsolete":false,"name":"plus-end directed microfilament motor activity","synonyms":[{"name":"barbed-end directed actin-filament motor activity","type":"exact"},{"name":"plus-end directed actin filament motor activity","type":"related"},{"name":"plus-end directed actin-filament motor activity","type":"exact"}],"termid":"GO:0060002"}


id: GO:1904017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Thyroglobulin triiodothyronine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:7531505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to Thyroglobulin triiodothyronine","termid":"GO:1904016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to Thyroglobulin triiodothyronine","termid":"GO:1904017"}


id: GO:1900099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plasma cell differentiation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of B cell differentiation","termid":"GO:0045578"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"is_a","term_name":"regulation of plasma cell differentiation","termid":"GO:1900098"},{"relation_name":"negatively_regulates","term_name":"plasma cell differentiation","termid":"GO:0002317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasma cell differentiation","synonyms":[{"name":"down regulation of plasma cell development","type":"related"},{"name":"down regulation of plasma cell differentiation","type":"exact"},{"name":"down-regulation of plasma cell development","type":"related"},{"name":"down-regulation of plasma cell differentiation","type":"exact"},{"name":"downregulation of plasma cell development","type":"related"},{"name":"downregulation of plasma cell differentiation","type":"exact"},{"name":"inhibition of plasma cell development","type":"related"},{"name":"inhibition of plasma cell differentiation","type":"narrow"},{"name":"negative regulation of plasma cell development","type":"related"}],"termid":"GO:1900099"}


id: PBO:0111423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo7","termid":"PBO:0111423"}


id: PBO:0041648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit alpha2delta 3","termid":"PBO:0041648"}


id: GO:0019819
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P1 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content; they contain fewer peroxisomal proteins than the other subforms.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005777","GO:0005575"],"is_obsolete":false,"name":"P1 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019819"}


id: PBO:0002151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transporter complex subunit Ctr5","termid":"PBO:0002151"}


id: PBO:0077712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transition protein 2","termid":"PBO:0077712"}


id: GO:0014058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of acetylcholine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acetylcholine secretion, neurotransmission","termid":"GO:0014056"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission, cholinergic","termid":"GO:0032223"},{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter secretion","termid":"GO:0046929"},{"relation_name":"is_a","term_name":"negative regulation of amine transport","termid":"GO:0051953"},{"relation_name":"negatively_regulates","term_name":"acetylcholine secretion, neurotransmission","termid":"GO:0014055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of acetylcholine secretion, neurotransmission","synonyms":[{"name":"down regulation of acetylcholine secretion","type":"exact"},{"name":"down-regulation of acetylcholine secretion","type":"exact"},{"name":"downregulation of acetylcholine secretion","type":"exact"},{"name":"inhibition of acetylcholine secretion","type":"narrow"}],"termid":"GO:0014058"}


id: PBO:0076814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teneurin transmembrane protein 2","termid":"PBO:0076814"}


id: GO:1903651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cytoplasmic transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25049409"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytoplasmic transport (obsolete GO:1903651)","synonyms":[{"name":"activation of cytoplasmic streaming","type":"narrow"},{"name":"activation of cytoplasmic transport","type":"narrow"},{"name":"positive regulation of cytoplasmic streaming","type":"narrow"},{"name":"up regulation of cytoplasmic streaming","type":"narrow"},{"name":"up regulation of cytoplasmic transport","type":"exact"},{"name":"up-regulation of cytoplasmic streaming","type":"narrow"},{"name":"up-regulation of cytoplasmic transport","type":"exact"},{"name":"upregulation of cytoplasmic streaming","type":"narrow"},{"name":"upregulation of cytoplasmic transport","type":"exact"}],"termid":"GO:1903651"}


id: GO:0160187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables size- and charge-selective transport of solutes through a tight junction barrier paracellularly, across the epithelium.","definition_xrefs":["PMID:30665499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter activity","termid":"GO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215"],"is_obsolete":false,"name":"paracellular tight junction channel activity","synonyms":[{"name":"claudin pore","type":"exact"}],"termid":"GO:0160187"}


id: PBO:0058075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4293","termid":"PBO:0058075"}


id: GO:0044683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the overall reaction: methyl-Co(III) methylated-thiol-specific corrinoid protein + coenzyme M = Co(I) methylated--thiol-specific corrinoid protein + methyl-CoM.","definition_xrefs":["MetaCyc:RXN-8125","PMID:9371433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"methylthiol:coenzyme M methyltransferase activity","secondary_identifiers":["RHEA:32667","EC:2.1.1.251"],"synonyms":[{"name":"methylthiol:coenzyme M methyl transferase activity","type":"exact"}],"termid":"GO:0044683"}


id: FYECO:0000260
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were blocked using hydroxyurea and subsequently released from the block.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HU block and release","termid":"FYECO:0000260"}


id: MONDO:0006636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus actinobacillus.","definition_xrefs":["MESH:D000189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actinobacillus infectious disease","synonyms":[{"name":"Actinobacillus caused disease or disorder","type":"exact"},{"name":"Actinobacillus disease or disorder","type":"exact"},{"name":"Actinobacillus infection","type":"related"},{"name":"infection, Actinobacillus","type":"related"},{"name":"infections, Actinobacillus","type":"related"}],"termid":"MONDO:0006636","xrefs":{"Monarch":{"xref_id":"0006636"}}}


id: PBO:0055042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2457","termid":"PBO:0055042"}


id: SO:0001433
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A three prime RACE (Rapid Amplification of cDNA Ends) clone is a cDNA clone copied from the 3' end of an mRNA (using a poly-dT primer to capture the polyA tail and a gene-specific or randomly primed 5' primer), and spliced into a vector for propagation in a suitable host.","definition_xrefs":["modENCODE:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cDNA_clone","termid":"SO:0000317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_RACE_clone","synonyms":[{"name":"3' RACE clone","type":"related"}],"termid":"SO:0001433"}


id: PBO:0031345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_camptothecin","termid":"PBO:0031345"}


id: GO:0098704
data:
  {"annotated_genes":["SJAG_00057","SJAG_03608","SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"},{"annotations":[111020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"},{"annotations":[96099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"},{"annotations":[96100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of a carbohydrate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null,"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"carbohydrate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097319"],"synonyms":[{"name":"carbohydrate import into cell","type":"exact"}],"termid":"GO:0098704","terms_by_termid":{"GO:0098708":null,"GO:0106081":null,"GO:0106082":null,"GO:0140425":null}}


id: GO:0031484
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class XIV myosin heavy chain and associated light chains; myosin XIV heavy chains are the simplest known, containing a motor domain, no classic IQ motif and variable length tails.","definition_xrefs":["PMID:10722873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"myosin XIV complex","termid":"GO:0031484"}


id: FYPO:0001966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to aculeacin A. Cells stop growing (and may die) at a concentration of aculeacin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to aculeacin A","synonyms":[{"name":"hypersensitive to aculeacin A","type":"exact"},{"name":"sensitive to aculeacin A during mitotic cell cycle","type":"related"},{"name":"sensitive to aculeacin A during vegetative growth","type":"exact"}],"termid":"FYPO:0001966"}


id: GO:0034129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of MyD88-independent toll-like receptor signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of toll-like receptor signaling pathway","termid":"GO:0034123"},{"relation_name":"is_a","term_name":"regulation of MyD88-independent toll-like receptor signaling pathway","termid":"GO:0034127"},{"relation_name":"positively_regulates","term_name":"MyD88-independent toll-like receptor signaling pathway","termid":"GO:0002756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of MyD88-independent toll-like receptor signaling pathway","synonyms":[{"name":"positive regulation of MyD88-independent TLR signaling pathway","type":"exact"},{"name":"positive regulation of MyD88-independent toll-like receptor","type":"exact"},{"name":"positive regulation of MyD88-independent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034129"}


id: MONDO:0021679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections caused by bacteria that retain the crystal violet stain (positive) when treated by the gram-staining method.","definition_xrefs":["MESH:D016908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gram-positive bacterial infections","secondary_identifiers":["SCTID:371582002","ICD9:041.89","MEDGEN:39283","UMLS:C0085426"],"synonyms":[{"name":"Gram Positive bacterial infections","type":"related"},{"name":"Gram-positive bacterial infection","type":"related"},{"name":"Gramme Positive bacterial infections","type":"related"},{"name":"bacterial infection, Gram-positive","type":"related"},{"name":"bacterial infections, Gram Positive","type":"related"},{"name":"bacterial infections, Gram-positive","type":"related"},{"name":"bacterial infections, Gramme Positive","type":"related"},{"name":"infection, Gram-positive bacterial","type":"related"},{"name":"infections, Gram Positive bacterial","type":"related"},{"name":"infections, Gram-positive bacterial","type":"related"},{"name":"infections, Gramme Positive bacterial","type":"related"}],"termid":"MONDO:0021679","xrefs":{"Monarch":{"xref_id":"0021679"}}}


id: PBO:0027668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_cytoplasmic_microtubules_present_in_increased_numbers","termid":"PBO:0027668"}


id: PBO:0108600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_causally_upstream_of","termid":"PBO:0108600"}


id: PBO:0039160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 5","termid":"PBO:0039160"}


id: PBO:0004346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA repair protein (predicted)","termid":"PBO:0004346"}


id: PBO:0067485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 619, pseudogene","termid":"PBO:0067485"}


id: PR:P87050
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdr2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis inducer protein kinase cdr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.02","synonyms":[{"name":"Spom972h-cdr2","type":"exact"}],"termid":"PR:P87050"}


id: GO:0061658
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of URM1 from one protein to another via the reaction X-URM1 + Y = Y-URM1 + X, where both the X-URM1 and Y-URM1 linkages are thioester bonds between the C-terminal amino acid of URM1 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"URM1 transferase activity","termid":"GO:0042294"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016746","GO:0019787","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"URM1 conjugating enzyme activity","synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061658"}


id: MONDO:0009468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic intracranial hypertension is a neurological disorder characterized by isolated increased intracranial pressure manifesting with recurrent and persistent headaches, nausea, vomiting, progressive and transient obstruction of the visual field, papilledema. Visual loss can be irreversible.","definition_xrefs":["Orphanet:238624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial hypertension","termid":"MONDO:0006810"},{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudotumor cerebri","secondary_identifiers":["SCTID:68267002","UMLS:C0033845","DOID:11459","MESH:D011559","EFO:1001132","ICD9:348.2","MedDRA:10037149","GARD:4561","MEDGEN:18732","NCIT:C85035","OMIM:243200"],"synonyms":[{"name":"IIH","type":"exact"},{"name":"Idiopathic Intracranial Hypertension","type":"exact"},{"name":"benign intracran. hypt.","type":"exact"},{"name":"benign intracranial hypertension","type":"exact"},{"name":"idiopathic intracranial hypertension","type":"exact"},{"name":"intracranial hypertension, idiopathic","type":"related"},{"name":"pseudotumor cerebri","type":"exact"}],"termid":"MONDO:0009468","xrefs":{"Monarch":{"xref_id":"0009468"}}}


id: GO:0102082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4'-demethylrebeccamycin + S-adenosyl-L-methionine = H+ + rebeccamycin + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"demethylrebeccamycin--D-glucose O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-10847","RHEA:27353"],"termid":"GO:0102082"}


id: GO:0034374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase, with the subsequent loss of free fatty acid, and the transfer of cholesterol esters from LDL to a triglyceride-rich lipoprotein particle by cholesteryl ester transfer protein (CETP), with the simultaneous transfer of triglyceride to LDL.","definition_xrefs":["GOC:expert_pt","GOC:rl","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle remodeling","termid":"GO:0034369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle remodeling","secondary_identifiers":["Reactome:R-HSA-8964041"],"synonyms":[{"name":"LDL remodeling","type":"exact"},{"name":"LDL remodelling","type":"exact"},{"name":"low-density lipoprotein particle remodelling","type":"exact"},{"name":"small dense LDL formation","type":"related"},{"name":"small dense low-density lipoprotein particle formation","type":"related"}],"termid":"GO:0034374"}


id: MONDO:1011144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Choanal atresia that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choanal atresia, non-human animal","termid":"MONDO:1010289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choanal atresia, sheep","secondary_identifiers":["OMIA:001764-9940"],"termid":"MONDO:1011144","xrefs":{"Monarch":{"xref_id":"1011144"}}}


id: PBO:0039614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A2 pseudogene 1","termid":"PBO:0039614"}


id: FYPO:0002662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is lower than normal when the cell is subject to heat shock.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular trehalose level","termid":"FYPO:0001447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular trehalose level during heat shock","synonyms":[{"name":"decreased cellular trehalose level during heat shock during mitotic cell cycle","type":"related"},{"name":"decreased cellular trehalose level during vegetative growth and during heat shock","type":"exact"},{"name":"decreased trehalose accumulation during heat shock","type":"related"},{"name":"reduced cellular trehalose level during heat shock","type":"exact"}],"termid":"FYPO:0002662"}


id: GO:0030178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the Wnt signaling pathway.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"negatively_regulates","term_name":"Wnt signaling pathway","termid":"GO:0016055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Wnt signaling pathway","secondary_identifiers":["GO:0045810"],"synonyms":[{"name":"down regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"down regulation of frizzled signaling pathway","type":"exact"},{"name":"down-regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"down-regulation of frizzled signaling pathway","type":"exact"},{"name":"downregulation of Wnt receptor signaling pathway","type":"exact"},{"name":"downregulation of frizzled signaling pathway","type":"exact"},{"name":"inhibition of Wnt receptor signaling pathway","type":"narrow"},{"name":"inhibition of frizzled signaling pathway","type":"narrow"},{"name":"negative regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway","type":"exact"},{"name":"negative regulation of Wnt-activated signaling pathway","type":"exact"},{"name":"negative regulation of frizzled signaling pathway","type":"exact"},{"name":"negative regulation of frizzled signalling pathway","type":"exact"}],"termid":"GO:0030178"}


id: PBO:0073161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC62 homolog, preprotein translocation factor","termid":"PBO:0073161"}


id: PBO:0078503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 regulated inhibitor of apoptosis 1 pseudogene 1","termid":"PBO:0078503"}


id: GO:0060778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the primary leaflet attains its shape. A primary leaflet is a leaflet that develops directly from the rachis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaflet morphogenesis","termid":"GO:0060794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary leaflet morphogenesis","termid":"GO:0060778"}


id: MONDO:0018094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by varying degrees of deafness and minor defects in structures arising from neural crest, including pigmentation anomalies of eyes, hair, and skin. WS is classified into four clinical and genetic phenotypes.","definition_xrefs":["Orphanet:3440"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow/eyelashes pigmentation anomaly (obsolete MONDO:0020191)","termid":"MONDO:0020191"},{"relation_name":"excluded_subClassOf","term_name":"obsolete pigmentation disorder with eye involvement, excluding albinism (obsolete MONDO:0020276)","termid":"MONDO:0020276"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome","secondary_identifiers":["DOID:9258","ICD10CM:E70.3","NORD:1832","OMIMPS:193500","NCIT:C85222","UMLS:C3266898","MESH:D014849","icd11.foundation:304883627","MedDRA:10069203","MEDGEN:473809","SCTID:715952000","GARD:5525"],"synonyms":[{"name":"Mende syndrome","type":"related"},{"name":"Van der Hoeve Halbertsma Waardenburg Gualdi syndrome","type":"related"},{"name":"Waardenburg Shah syndrome","type":"exact"},{"name":"Waardenburg syndrome","type":"exact"},{"name":"Waardenburg's syndrome","type":"exact"},{"name":"Waardenburg, types I and/or II","type":"narrow"},{"name":"van der Hoeve Halbertsona Waardenburg syndrome","type":"exact"}],"termid":"MONDO:0018094","xrefs":{"Monarch":{"xref_id":"0018094"}}}


id: PBO:0077170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tousled like kinase 2 pseudogene 1","termid":"PBO:0077170"}


id: MONDO:0010574
data:
  {"annotated_genes":["SJAG_00379"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87210],"is_not":false,"summary":null,"term":"MONDO:0010574"}]},"cv_name":"mondo","definition":"X-linked Dandy-Walker malformation with intellectual disability, basal ganglia disease and seizures (XDIBS), or Pettigrew syndrome is a central nervous system malformation characterized by severe intellectual deficit, early hypotonia with progression to spasticity and contractures, choreoathetosis, seizures, dysmorphic face (long face with prominent forehead), and brain imaging abnormalities such as Dandy-Walker malformation, and iron deposition.","definition_xrefs":["Orphanet:1568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"syndromic X-linked intellectual disability 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:162924","SCTID:719139003","DOID:0060800","GARD:8520","Orphanet:85329","UMLS:C0796254","NCIT:C124839","OMIM:304340"],"synonyms":[{"name":"Dandy-Walker malformation with intellectual disability, basal ganglia disease and seizures","type":"related"},{"name":"MRX59","type":"exact"},{"name":"MRXS21","type":"exact"},{"name":"MRXS5","type":"related"},{"name":"PETTIGREW syndrome","type":"related"},{"name":"PGS","type":"related"},{"name":"Pettigrew syndrome","type":"exact"},{"name":"Pettigrew syndrome, X-linked recessive","type":"exact"},{"name":"X-linked intellectual disability - Dandy-Walker malformation - basal ganglia disease - seizures","type":"related"},{"name":"X-linked intellectual disability 59","type":"exact"},{"name":"X-linked intellectual disability-Dandy-Walker malformation-basal ganglia disease-seizures syndrome","type":"exact"},{"name":"X-linked intellectual disability-hypotonia-facial dysmorphism-aggressive behavior syndrome","type":"exact"},{"name":"X-linked intellectual disability-hypotonia-facial dysmorphism-aggressive behaviour syndrome","type":"exact"},{"name":"X-linked mental retardation 59","type":"exact"},{"name":"X-linked metal retardation with Dandy-Walker malformation, basal ganglia disease, and seizures","type":"exact"},{"name":"fried syndrome","type":"related"},{"name":"intellectual disability X-linked syndromic 5","type":"related"},{"name":"intellectual disability X-linked with Dandy-Walker malformation basal ganglia disease and seizures","type":"related"},{"name":"intellectual disability, X-linked 59","type":"related"},{"name":"intellectual disability, X-linked syndromic 5","type":"exact"},{"name":"intellectual disability, X-linked, syndromic 21","type":"related"},{"name":"intellectual disability, X-linked, syndromic 5","type":"related"},{"name":"intellectual disability, X-linked, syndromic, fried type","type":"related"},{"name":"intellectual disability, X-linked, with Dandy-Walker malformation, basal ganglia disease, and seizures","type":"related"},{"name":"mental retardation X-linked syndromic 5","type":"related"},{"name":"mental retardation X-linked with Dandy-Walker malformation basal ganglia disease and seizures","type":"related"},{"name":"mental retardation, X-linked 59","type":"related"},{"name":"mental retardation, X-linked syndromic 5","type":"exact"},{"name":"mental retardation, X-linked, syndromic 21","type":"related"},{"name":"mental retardation, X-linked, syndromic 5","type":"related"},{"name":"mental retardation, X-linked, syndromic, fried type","type":"related"},{"name":"mental retardation, X-linked, with Dandy-Walker malformation, basal ganglia disease, and seizures","type":"related"},{"name":"syndromic X-linked intellectual disability 21","type":"exact"},{"name":"syndromic X-linked intellectual disability fried type","type":"exact"},{"name":"syndromic X-linked intellectual disability type 5","type":"exact"},{"name":"syndromic X-linked mental retardation 21","type":"exact"},{"name":"syndromic X-linked mental retardation fried type","type":"exact"}],"termid":"MONDO:0010574","terms_by_termid":{"MONDO:0010574":null},"xrefs":{"Monarch":{"xref_id":"0010574"}}}


id: PBO:0084368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid-interacting protein in SNARE complex assembly machinery; acts at late step in secretion; interacts with membranes through two distinct binding sites; shows genetic and physical interactions with Sec1p; required for prospore membrane formation during sporulation; N-terminus closely associates with plasma membrane, C-terminus colocalizes with Sec4p on intracellular membranes; relocalizes from bud neck to nucleus upon DNA replication stress","termid":"PBO:0084368"}


id: GO:0000700
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000701"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of single bases present in mismatches by the cleavage the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apurinic/apyrimidinic (AP) site.","definition_xrefs":["GOC:elh","PMID:9224623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA N-glycosylase activity","termid":"GO:0019104"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"mismatch base pair DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0000700","terms_by_termid":{"GO:0000701":null}}


id: MONDO:0018325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile myasthenia gravis (MG) is a rare form of MG, an autoimmune disorder of the neuromuscular junction resulting in ocular manifestations or generalized weakness, with onset before 18 years of age.","definition_xrefs":["Orphanet:391497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myasthenia gravis","termid":"MONDO:0009688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"juvenile myasthenia gravis","secondary_identifiers":["MEDGEN:1842990","UMLS:C5680023","GARD:21624"],"synonyms":[{"name":"childhood myasthenia gravis","type":"exact"},{"name":"juvenile acquired myasthenia","type":"exact"},{"name":"juvenile autoimmune myasthenia gravis","type":"exact"},{"name":"myasthenia gravis of childhood","type":"exact"},{"name":"paediatric myasthenia gravis","type":"exact"},{"name":"pediatric myasthenia gravis","type":"exact"}],"termid":"MONDO:0018325","xrefs":{"Monarch":{"xref_id":"0018325"}}}


id: PBO:0083080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Disaggregase; heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p (Hsp70) to refold and reactivate previously denatured, aggregated proteins; responds to stresses including heat, ethanol, and sodium arsenite; involved in [PSI+] propagation; protein becomes more abundant and forms cytoplasmic foci in response to DNA replication stress; potentiated Hsp104p variants decrease TDP-43 proteotoxicity by eliminating its cytoplasmic aggregation","termid":"PBO:0083080"}


id: PBO:0080579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 5","termid":"PBO:0080579"}


id: PBO:0077760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20 pseudogene 2","termid":"PBO:0077760"}


id: PBO:0062107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 5","termid":"PBO:0062107"}


id: MONDO:0002407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A common hemangioma characterized by the presence of capillary-sized vascular channels without prominent epithelioid endothelial cells.","definition_xrefs":["NCIT:C7457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capillary hemangioma","secondary_identifiers":["ICDO:9131/0","MEDGEN:64643","MESH:D018324","UMLS:C0206733","DOID:2725","SCTID:56975005"],"synonyms":[{"name":"capillary angioma","type":"exact"},{"name":"capillary hemangioma","type":"exact"},{"name":"capillary hemangioma (morphologic abnormality)","type":"exact"},{"name":"cellular hemangioma of infancy","type":"narrow"},{"name":"cellular hemangioma of infancy (strawberry nevus)","type":"narrow"},{"name":"congenital vascular hamartoma","type":"exact"},{"name":"congenital vascular naevus","type":"exact"},{"name":"infantile hemangioma","type":"narrow"},{"name":"juvenile hemangioma","type":"narrow"},{"name":"strawberry haemangioma","type":"exact"},{"name":"strawberry nevus","type":"exact"},{"name":"strawberry nevus of skin","type":"exact"}],"termid":"MONDO:0002407","xrefs":{"Monarch":{"xref_id":"0002407"}}}


id: PBO:0113482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telobox-containing general regulatory factor; binds TTAGGG repeats within subtelomeric anti-silencing regions (STARs), blocking silent chromatin propagation; binds majority of snoRNA gene promoters, required for full snoRNA expression; caps DSB flanked by long T2AG3 repeats and blocks checkpoint activation; involved in nucleosome displacement during double-strand break repair","termid":"PBO:0113482"}


id: GO:1900783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fumiquinazoline F.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline F catabolic process (obsolete GO:1900783)","synonyms":[{"name":"fumiquinazoline F breakdown","type":"exact"},{"name":"fumiquinazoline F catabolism","type":"exact"},{"name":"fumiquinazoline F degradation","type":"exact"}],"termid":"GO:1900783"}


id: PBO:0066930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 232","termid":"PBO:0066930"}


id: PBO:0017683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transmembrane transporter, meiotic Mfc1","termid":"PBO:0017683"}


id: GO:0090320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of chylomicron remnant clearance. Chylomicron clearance is the process in which a chylomicron remnant is removed from the blood via receptor-mediated endocytosis into liver cells and its constituent parts degraded.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein particle clearance","termid":"GO:0010984"},{"relation_name":"regulates","term_name":"chylomicron remnant clearance","termid":"GO:0034382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chylomicron remnant clearance","termid":"GO:0090320"}


id: PR:000050476
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein kinase wis1 (Schizosaccharomyces pombe) that has not been phosphorylated on residues equivalent to Ser-469 and Thr-473 of the amino acid sequence represented by UniProtKB:P33886. Example: UniProtKB:P33886, Ser-469/Thr-473, PR:000026291.","definition_xrefs":["PRO:DAN","PMID:12181336","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase wis1 (Schizosaccharomyces pombe)","termid":"PR:000050474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wis1/UnPhos:(S469,T473)","pombase_gene_id":"SPBC409.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: protein kinase wis1 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-wis1/UnPhos:1","type":"exact"},{"name":"UniProtKB:P33886, Ser-469/Thr-473, PR:000026291","type":"narrow"},{"name":"wis1/UnPhos:(S469,T473)","type":"exact"}],"termid":"PR:000050476"}


id: GO:0047326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP + H+.","definition_xrefs":["RHEA:12717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate kinase activity","termid":"GO:0051765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"inositol-1,3,4,6-tetrakisphosphate 5-kinase activity","secondary_identifiers":["Reactome:R-HSA-1855228","KEGG_REACTION:R03478","MetaCyc:2.7.1.140-RXN"],"synonyms":[{"name":"1D-myo-inositol-tetrakisphosphate 5-kinase activity","type":"broad"},{"name":"ATP:1D-myo-inositol-1,3,4,6-tetrakisphosphate 5-phosphotransferase activity","type":"related"},{"name":"inositol 1,3,4,6-tetrakisphosphate 5-kinase activity","type":"exact"},{"name":"inositol tetrakisphosphate 5-kinase activity","type":"broad"},{"name":"inositol-tetrakisphosphate 5-kinase activity","type":"broad"}],"termid":"GO:0047326"}


id: MONDO:0009505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0019254","MONDO:0005066"],"is_obsolete":false,"name":"lactic aciduria due to D-lactic acid","secondary_identifiers":["MEDGEN:1679270","MESH:C565446","UMLS:C5193006","OMIM:245450"],"synonyms":[{"name":"D-lactic aciduria with susceptibility to gout","type":"exact"},{"name":"lactic aciduria due to D-lactic acid","type":"exact"}],"termid":"MONDO:0009505","xrefs":{"Monarch":{"xref_id":"0009505"}}}


id: GO:0015548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of organomercurial compounds from one side of a membrane to the other. Organomercurial substances are any organic compound containing a mercury atom.","definition_xrefs":["PMID:18793329","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete organomercurial transmembrane transporter activity (obsolete GO:0015548)","synonyms":[{"name":"carbonyl cyanide m-chlorophenylhydrazone/nalidixic acid/organomercurials:hydrogen antiporter activity","type":"narrow"},{"name":"organomercurial transporter activity","type":"related"}],"termid":"GO:0015548"}


id: MONDO:0003166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pilocytic astrocytoma (obsolete MONDO:0003166)","termid":"MONDO:0003166","xrefs":{"Monarch":{"xref_id":"0003166"}}}


id: PBO:0063811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 1 pseudogene 3","termid":"PBO:0063811"}


id: PBO:0088655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine H3-K4 methyltransferase Set1","termid":"PBO:0088655"}


id: PBO:0005898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit 8 (predicted)","termid":"PBO:0005898"}


id: PR:O74988
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase polypeptide 5, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.10c","synonyms":[{"name":"Spom972h-cox5","type":"exact"},{"name":"cytochrome c oxidase polypeptide V (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74988"}


id: GO:0050339
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTTP + H2O = dTDP + H+ + phosphate.","definition_xrefs":["RHEA:19013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside triphosphate phosphatase activity","termid":"GO:0017111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"TTPase activity","secondary_identifiers":["EC:3.6.1.39","MetaCyc:THYMIDINE-TRIPHOSPHATASE-RXN"],"synonyms":[{"name":"dTTP nucleotidohydrolase activity","type":"related"},{"name":"dTTPase activity","type":"related"},{"name":"deoxythymidine-5'-triphosphatase activity","type":"related"},{"name":"thymidine triphosphatase activity","type":"exact"},{"name":"thymidine triphosphate nucleotidohydrolase activity","type":"related"},{"name":"thymidine-triphosphatase activity","type":"exact"}],"termid":"GO:0050339"}


id: GO:0003827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(alpha-D-mannosyl)-beta-D-mannosyl-R + UDP-N-acetyl-alpha-D-glucosamine = 3-(2-[N-acetyl-beta-D-glucosaminyl]-alpha-D-mannosyl)-beta-D-mannosyl-R + H+ + UDP.","definition_xrefs":["RHEA:11456","EC:2.4.1.101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.101-RXN","KEGG_REACTION:R05983","Reactome:R-HSA-964768"],"synonyms":[{"name":"GNTI activity","type":"related"},{"name":"GnTI","type":"related"},{"name":"N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:3-(alpha-D-mannosyl)-beta-D-mannosyl-glycoprotein 2-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylglucosaminyl:alpha-1,3-D-mannoside-beta-1,2-N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"UDP-N-acetylglucosaminyl:alpha-3-D-mannoside beta-1,2-N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"alpha-1,3-mannosylglycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"exact"},{"name":"uridine diphosphoacetylglucosamine-alpha-1,3-mannosylglycoprotein beta-1,2-N-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0003827"}


id: MONDO:0011952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 7","secondary_identifiers":["DOID:0060199","MEDGEN:334136","MESH:C564300","OMIM:608031","UMLS:C1842674","GARD:10500"],"synonyms":[{"name":"ALS7","type":"exact"},{"name":"amyotrophic lateral sclerosis 7","type":"exact"}],"termid":"MONDO:0011952","xrefs":{"Monarch":{"xref_id":"0011952"}}}


id: GO:0031354
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of plastid outer membrane (obsolete GO:0031354)","synonyms":[{"name":"intrinsic to plastid outer membrane","type":"narrow"}],"termid":"GO:0031354"}


id: MONDO:0011257
data:
  {"annotated_genes":["SJAG_02648"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86660],"is_not":false,"summary":null,"term":"MONDO:0011257"}]},"cv_name":"mondo","definition":"MPI-CDG is a form of congenital disorders of N-linked glycosylation, characterized by cyclic vomiting, profound hypoglycemia, failure to thrive, liver fibrosis, gastrointestinal complications (protein-losing enteropathy with hypoalbuminaemia, life-threatening intestinal bleeding of diffuse origin), and thrombotic events (protein C and S deficiency, low anti-thrombine III levels), whereas neurological development and cognitive capacity is usually normal. The clinical course is variable even within families. The disease is caused by loss of function of the gene MPI (15q24.1).","definition_xrefs":["Orphanet:79319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"},{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02648":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005046","MONDO:0005066"],"is_obsolete":false,"name":"MPI-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:277.6","SCTID:124668009","OMIM:602579","MEDGEN:400692","MESH:C535740","GARD:9830","UMLS:C1865145","DOID:0080554"],"synonyms":[{"name":"CDG 1B","type":"related"},{"name":"CDG Ib","type":"related"},{"name":"CDG gastrointestinal type","type":"related"},{"name":"CDG syndrome type IB","type":"exact"},{"name":"CDG, gastrointestinal type","type":"related"},{"name":"CDG-Ib","type":"exact"},{"name":"CDG1B","type":"exact"},{"name":"MPI-CDG","type":"exact"},{"name":"MPI-CDG (CDG-Ib)","type":"related"},{"name":"Mannosephosphate isomerase deficiency","type":"related"},{"name":"Mpi deficiency","type":"related"},{"name":"Protein-losing enteropathy-hepatic fibrosis syndrome","type":"related"},{"name":"SLSJ syndrome","type":"related"},{"name":"Saguenay Lac Saint Jean syndrome","type":"related"},{"name":"Saguenay-Lac Saint-Jean syndrome","type":"related"},{"name":"Slsj syndrome","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type IB","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1B","type":"related"},{"name":"congenital disorder of glycosylation type 1b","type":"exact"},{"name":"congenital disorder of glycosylation type IB","type":"exact"},{"name":"congenital disorder of glycosylation, type IB","type":"related"},{"name":"phosphomannose isomerase deficiency","type":"exact"}],"termid":"MONDO:0011257","terms_by_termid":{"MONDO:0011257":null},"xrefs":{"Monarch":{"xref_id":"0011257"}}}


id: PBO:0047893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(6)(q15)","termid":"PBO:0047893"}


id: FYPO:0007998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed during mitotic interphase in which the localization of a protein to interphase microtubule bundles is abnormal.","definition_xrefs":["PMID:15184402","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to interphase microtubule bundle","termid":"FYPO:0007998"}


id: PBO:0044489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 46 subfamily A member 1","termid":"PBO:0044489"}


id: GO:0006244
data:
  {"annotated_genes":["SJAG_04487","SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"},{"annotations":[76821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide metabolic process","termid":"GO:0006220"},{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03676":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine nucleotide breakdown","type":"exact"},{"name":"pyrimidine nucleotide catabolism","type":"exact"},{"name":"pyrimidine nucleotide degradation","type":"exact"}],"termid":"GO:0006244","terms_by_termid":{"GO:0006256":null,"GO:0046081":null}}


id: GO:0008727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + H2O = GDP + D-mannose + H+.","definition_xrefs":["MetaCyc:GDPMANMANHYDRO-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosidase activity","termid":"GO:0015923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"GDP-mannose mannosyl hydrolase activity","secondary_identifiers":["RHEA:28102"],"termid":"GO:0008727"}


id: PBO:0049354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 12","termid":"PBO:0049354"}


id: PBO:0056668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 6","termid":"PBO:0056668"}


id: PBO:0087503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Golgi mannosyltransferase complex; this complex mediates elongation of the polysaccharide mannan backbone; forms a separate complex with Van1p that is also involved in backbone elongation; this complex also contains Anp1p, Mnn10p, Mnn11p, and Hoc1p","termid":"PBO:0087503"}


id: SO:0002194
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has arisen from a copy of the parent gene by duplication followed by accumulation of random mutation. The changes, compared to their functional homolog, include insertions, deletions, premature stop codons, frameshifts and a higher proportion of non-synonymous versus synonymous substitutions.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_rRNA","termid":"SO:0000777"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unprocessed_pseudogenic_rRNA","synonyms":[{"name":"INSDC_feature:rRNA","type":"broad"},{"name":"INSDC_qualifier:unprocessed","type":"exact"},{"name":"unprocessed pseudogenic rRNA","type":"exact"}],"termid":"SO:0002194"}


id: GO:0042180
data:
  {"annotated_genes":["SJAG_02988","SJAG_03130","SJAG_01866","SJAG_01820","SJAG_02488","SJAG_04000","SJAG_04642","SJAG_01043","SJAG_00933","SJAG_01596","SJAG_01865","SJAG_00721","SJAG_04726","SJAG_02106","SJAG_01402","SJAG_04568","SJAG_00459","SJAG_02960","SJAG_04223","SJAG_01672","SJAG_04674","SJAG_01668","SJAG_04404","SJAG_06603"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006666"},{"annotations":[61074,74833,103137,73297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[105405,61073,59308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"},{"annotations":[71243],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[89514],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904775"},{"annotations":[75467],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[73420,64191,74218,119644,79495,76970,72782,88029,119645,74455,74545,79012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006744"},{"annotations":[115602,119643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006743"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any of a class of organic compounds that contain the carbonyl group, CO, and in which the carbonyl group is bonded only to carbon atoms, as carried out by individual cells. The general formula for a ketone is RCOR, where R and R are alkyl or aryl groups.","definition_xrefs":["ISBN:0787650153","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00459":null,"SJAG_00721":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01402":null,"SJAG_01596":null,"SJAG_01668":null,"SJAG_01672":null,"SJAG_01820":null,"SJAG_01865":null,"SJAG_01866":null,"SJAG_02106":null,"SJAG_02488":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_03130":null,"SJAG_04000":null,"SJAG_04223":null,"SJAG_04404":null,"SJAG_04568":null,"SJAG_04642":null,"SJAG_04674":null,"SJAG_04726":null,"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ketone metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:29191091":null},"synonyms":[{"name":"ketone metabolism","type":"exact"}],"termid":"GO:0042180","terms_by_termid":{"GO:0006666":null,"GO:0006743":null,"GO:0006744":null,"GO:0010510":null,"GO:0019243":null,"GO:0045717":null,"GO:0061727":null,"GO:1904775":null}}


id: GO:1904161
data:
  {"annotated_genes":["SJAG_00814","SJAG_04877","SJAG_05197","SJAG_02818"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77245,95572,103169,109476],"is_not":false,"summary":null,"term":"GO:1904161"}]},"cv_name":"biological_process","definition":"Any DNA synthesis that is involved in UV-damage excision repair.","definition_xrefs":["PMID:10704216","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA repair","termid":"GO:0000731"},{"relation_name":"part_of","term_name":"UV-damage excision repair","termid":"GO:0070914"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00814":null,"SJAG_02818":null,"SJAG_04877":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"DNA synthesis involved in UV-damage excision repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA synthesis during UV-damage excision repair","type":"related"},{"name":"DNA synthesis during UV-damaged DNA endonuclease-dependent excision repair","type":"related"},{"name":"DNA synthesis during UVDE-dependent excision repair","type":"related"},{"name":"DNA synthesis during UVER","type":"related"},{"name":"DNA synthesis involved in AER","type":"related"},{"name":"DNA synthesis involved in UV-damaged DNA endonuclease-dependent excision repair","type":"exact"},{"name":"DNA synthesis involved in UVDE-dependent excision repair","type":"exact"},{"name":"DNA synthesis involved in UVER","type":"exact"},{"name":"DNA synthesis involved in alternative excision repair","type":"related"},{"name":"mitotic DNA repair synthesis involved in UV-damage excision repair","type":"narrow"},{"name":"mitotic DNA repair synthesis involved in UV-damaged DNA endonuclease-dependent excision repair","type":"narrow"},{"name":"mitotic DNA repair synthesis involved in UVDE-dependent excision repair","type":"narrow"},{"name":"mitotic DNA repair synthesis involved in UVER","type":"narrow"}],"termid":"GO:1904161","terms_by_termid":{"GO:1904161":null}}


id: GO:1990260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter using a mechanism that involves the localization of a transcription factor and initiated in response to the DNA damage checkpoint signaling.","definition_xrefs":["PMID:24006488"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter by transcription factor localization involved in response to DNA damage checkpoint signaling (obsolete GO:1990260)","termid":"GO:1990260"}


id: PBO:0091918
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FrataXiN","termid":"PBO:0091918"}


id: PBO:0034318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-receives_input_from","termid":"PBO:0034318"}


id: GO:0008420
data:
  {"annotated_genes":["SJAG_03126","SJAG_03624","SJAG_02389","SJAG_02203","SJAG_01286"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67669,80186],"is_not":false,"summary":null,"term":"GO:0008420"},{"annotations":[97521,96170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180007"},{"annotations":[112347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180005"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat--phospho-L-serine/threonine (consensus YSPTSPS) + H2O = RNA polymerase II large subunit + phosphate.","definition_xrefs":["PMID:22622228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase activity","termid":"GO:0004722"},{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat modifying activity","termid":"GO:0140994"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01286":null,"SJAG_02203":null,"SJAG_02389":null,"SJAG_03126":null,"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016788","GO:0004721","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat phosphatase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"CTD phosphatase activity","type":"exact"},{"name":"RNA polymerase II carboxy-terminal domain phosphatase activity","type":"exact"}],"termid":"GO:0008420","terms_by_termid":{"GO:0008420":null,"GO:0180005":null,"GO:0180007":null}}


id: PBO:0016937
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insulinase Related Protease","termid":"PBO:0016937"}


id: GO:0044241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The whole of the physical, chemical, and biochemical processes carried out by living organisms to break down ingested lipids into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestion","termid":"GO:0007586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid digestion","secondary_identifiers":["Reactome:R-HSA-192456"],"termid":"GO:0044241"}


id: PBO:0077743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducer of ERBB2, 2 pseudogene 1","termid":"PBO:0077743"}


id: PBO:0060051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 39","termid":"PBO:0060051"}


id: PBO:0039806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 2, pseudogene","termid":"PBO:0039806"}


id: PBO:0027863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K56_acetylation","termid":"PBO:0027863"}


id: PBO:0086804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YDL186W is not an essential gene","termid":"PBO:0086804"}


id: PBO:0071475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 16","termid":"PBO:0071475"}


id: PBO:0002448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Rbp28","termid":"PBO:0002448"}


id: GO:0045181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 L-glutamate + NAD(P)+ = L-glutamine + 2-oxoglutarate + NAD(P)H + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate synthase activity, NAD(P)H as acceptor (obsolete GO:0045181)","synonyms":[{"name":"glutamate synthase activity, NADH or NADPH as acceptor","type":"related"}],"termid":"GO:0045181"}


id: MONDO:0015165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute myeloid leukemia and myelodysplastic syndromes related to topoisomerase type 2 inhibitor represent a subgroup of therapy-related myeloid neoplasms (t-MN), associated with treatment of an unrelated neoplastic disease with cytotoxic agents, like etoposid, doxorubicin, daunorubicin and others. The neoplastic cells often show rearrangements involving the mixed lineage leukemia gene at 11q23. This subgroup of t-MN is typically associated with overt leukemia, without preceding myelodysplastic syndrome, developing 2-3 years after exposure, presenting with non-specific symptoms related to ineffective hematopoesis (fatigue, bleeding and bruising, recurrent infections, bone pain) and/or extramedullary site involvement.","definition_xrefs":["Orphanet:102381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"therapy related acute myeloid leukemia and myelodysplastic syndrome","termid":"MONDO:0019457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia and myelodysplastic syndromes related to topoisomerase type 2 inhibitor","secondary_identifiers":["icd11.foundation:88207494","GARD:19836","MEDGEN:1639654","UMLS:C4707659"],"synonyms":[{"name":"AML and myelodysplastic syndromes related to topoisomerase type 2 inhibitor","type":"exact"}],"termid":"MONDO:0015165","xrefs":{"Monarch":{"xref_id":"0015165"}}}


id: GO:0031910
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stable, specialized structure for the ingestion of food by the cell into phagosomes.","definition_xrefs":["PMID:10503189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cytostome","secondary_identifiers":["Wikipedia:Cytostome"],"termid":"GO:0031910"}


id: GO:0003262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of an endocardial progenitor cell toward the midline to form the heart field. Cardiac muscle progenitor cells are non-terminally differentiated, mesoderm-derived cells that are committed to differentiate into endocardial cells of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardioblast migration to the midline involved in heart field formation","termid":"GO:0060975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial progenitor cell migration to the midline involved in heart field formation","termid":"GO:0003262"}


id: PBO:0028567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_homologous_chromosome_biorientation","termid":"PBO:0028567"}


id: PBO:0028593
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_heat","termid":"PBO:0028593"}


id: GO:1905246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of aspartic-type peptidase activity.","definition_xrefs":["GOC:TermGenie","PMID:21745575","GOC:jl","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of aspartic-type peptidase activity (obsolete GO:1905246)","synonyms":[{"name":"down regulation of aspartic-type peptidase activity","type":"exact"},{"name":"down-regulation of aspartic-type peptidase activity","type":"exact"},{"name":"downregulation of aspartic-type peptidase activity","type":"exact"},{"name":"inhibition of aspartic-type peptidase activity","type":"narrow"},{"name":"pepsin inhibitor","type":"related"}],"termid":"GO:1905246"}


id: PBO:0083992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutathione-dependent oxidoreductase and glutathione S-transferase; hydroperoxide/superoxide-radical responsive monothiol glutaredoxin subfamily member with Grx3p and Grx5p; protects cells from oxidative damage with GRX3 and GRX5; with Grx3p, promotes dissociation of Aft1p from iron regulon gene promoters and subsequent nuclear export in iron-replete conditions, regulating iron homeostasis; involved with Grx3p in Sir2p deglutathionylation, restoring deacetylase activity after disulfide stress","termid":"PBO:0083992"}


id: GO:0043990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of an phosphate group to a serine residue at position 1 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-S1 phosphorylation (obsolete GO:0043990)","synonyms":[{"name":"histone H2A phosphorylation at S1","type":"exact"},{"name":"histone H2AS1 phosphorylation","type":"exact"}],"termid":"GO:0043990"}


id: PBO:0085535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S6, no bacterial homolog; phosphorylated on S233 by Ypk3p in a TORC1-dependent manner, and on S232 in a TORC1/2-dependent manner by Ypk1/2/3p; RPS6A has a paralog, RPS6B, that arose from the whole genome duplication","termid":"PBO:0085535"}


id: PBO:0091937
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Division Mal Foutue","termid":"PBO:0091937"}


id: PBO:0076702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 3 pseudogene 1","termid":"PBO:0076702"}


id: PBO:0017468
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-formed_as_result_of","termid":"PBO:0017468"}


id: PBO:0041244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 122","termid":"PBO:0041244"}


id: MONDO:0042967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rheumatologic disorder that involves the mitral valve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve disorder","termid":"MONDO:0003767"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"rheumatic disease of mitral valve","secondary_identifiers":["SCTID:83898004","UMLS:C0264765","MEDGEN:538824"],"synonyms":[{"name":"mitral valve rheumatologic disorder","type":"exact"},{"name":"rheumatic disease of mitral valve","type":"exact"},{"name":"rheumatic mitral valve changes","type":"related"},{"name":"rheumatic mitral valve disease","type":"related"},{"name":"rheumatologic disorder of mitral valve","type":"exact"}],"termid":"MONDO:0042967","xrefs":{"Monarch":{"xref_id":"0042967"}}}


id: PBO:0057061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 145","termid":"PBO:0057061"}


id: GO:0014905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which non-proliferating myoblasts, after migrating to the site of injury, fuse into existing damaged fibers or fuse to myotubes to form new fibers, as part of the process of skeletal muscle regeneration. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast fusion","termid":"GO:0007520"},{"relation_name":"part_of","term_name":"myotube differentiation involved in skeletal muscle regeneration","termid":"GO:0014908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fusion involved in skeletal muscle regeneration","termid":"GO:0014905"}


id: SO:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000008 gene_sensu_your_favorite_organism (obsolete SO:0000008)","termid":"SO:0000008"}


id: PBO:0002701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Caf16 (predicted)","termid":"PBO:0002701"}


id: FYPO:0002210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that taper at one end to a diameter smaller than the other. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, tapered cells (obsolete FYPO:0002210)","synonyms":[{"name":"inviable microcolony, bottle/skittle cells","type":"exact"},{"name":"inviable microcolony, skittle-shaped cells","type":"exact"},{"name":"inviable microcolony, tapered vegetative cells","type":"exact"}],"termid":"FYPO:0002210"}


id: PBO:0043758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 8B, pseudogene","termid":"PBO:0043758"}


id: GO:0050647
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid, a straight-chain fatty acid with twenty carbon atoms and four double bonds.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"},{"relation_name":"is_a","term_name":"icosanoid binding","termid":"GO:0050542"},{"relation_name":"is_a","term_name":"fatty acid derivative binding","termid":"GO:1901567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"5-hydroxy-6E,8Z,11Z,14Z-icosatetraenoic acid binding","synonyms":[{"name":"5-hydroxy-6E,8Z,11Z,14Z-eicosatetraenoic acid binding","type":"exact"}],"termid":"GO:0050647"}


id: MONDO:0013859
data:
  {"annotated_genes":["SJAG_00404"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86644],"is_not":false,"summary":null,"term":"MONDO:0013859"}]},"cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the AGK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00404":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 38","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110245","MEDGEN:766408","UMLS:C3553494","OMIM:614691"],"synonyms":[{"name":"AGK early-onset non-syndromic cataract","type":"exact"},{"name":"CATC5","type":"exact"},{"name":"CTRCT38","type":"exact"},{"name":"autosomal recessive congenital cataract 5","type":"exact"},{"name":"cataract 38","type":"exact"},{"name":"cataract 38, autosomal recessive","type":"exact"},{"name":"cataract type 38","type":"exact"},{"name":"cataract, autosomal recessive congenital 5","type":"related"},{"name":"early-onset non-syndromic cataract caused by mutation in AGK","type":"exact"}],"termid":"MONDO:0013859","terms_by_termid":{"MONDO:0013859":null},"xrefs":{"Monarch":{"xref_id":"0013859"}}}


id: GO:0140975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of a cellular component of another organism, leading to damage or temporary subversion of that structure. In some cases this can cause malfunctioning of the cells and death of the target organism.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of anatomical structure in another organism","termid":"GO:0141060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disruption of cellular anatomical structure in another organism","synonyms":[{"name":"disruption of cellular component of another organism","type":"broad"}],"termid":"GO:0140975"}


id: GO:0008009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of a family of small chemotactic cytokines; their name is derived from their ability to induce directed chemotaxis in nearby responsive cells. All chemokines possess a number of conserved cysteine residues involved in intramolecular disulfide bond formation. Some chemokines are considered pro-inflammatory and can be induced during an immune response to recruit cells of the immune system to a site of infection, while others are considered homeostatic and are involved in controlling the migration of cells during normal processes of tissue maintenance or development. Chemokines are found in all vertebrates, some viruses and some bacteria.","definition_xrefs":["GOC:rl","PMID:12183377","GOC:BHF","Wikipedia:Chemokine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine activity","termid":"GO:0005125"},{"relation_name":"is_a","term_name":"chemokine receptor binding","termid":"GO:0042379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"chemokine activity","termid":"GO:0008009"}


id: MONDO:0011506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, infantile epilepsy syndrome disease characterized by neonatal- to infancy-onset myoclonic focal seizures occurring in various members of a family, associated in some with mild dysarthria, ataxia and borderline-to-moderate intellectual disability.","definition_xrefs":["Orphanet:352582"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"early myoclonic encephalopathy","termid":"MONDO:0016022"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"myoclonic epilepsy","termid":"MONDO:0100577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial infantile myoclonic epilepsy","secondary_identifiers":["UMLS:C0917800","GARD:17521","MEDGEN:181488","OMIM:605021"],"synonyms":[{"name":"Eim","type":"related"},{"name":"FIME","type":"exact"},{"name":"familial infantile myoclonus epilepsy","type":"exact"},{"name":"myoclonic epilepsy, familial infantile","type":"related"},{"name":"myoclonic epilepsy, infantile, familial","type":"exact"}],"termid":"MONDO:0011506","xrefs":{"Monarch":{"xref_id":"0011506"}}}


id: PBO:0060848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nei like DNA glycosylase 2","termid":"PBO:0060848"}


id: PBO:0062167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 8 pseudogene","termid":"PBO:0062167"}


id: MONDO:1012739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any xanthinuria that occurs in dogs due to a mutation in the MOCOS gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"xanthinuria, dog","termid":"MONDO:1011623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthinuria, type II, dog","secondary_identifiers":["OMIA:001819-9615"],"synonyms":[{"name":"xanthinuria, type II, dog","type":"exact"}],"termid":"MONDO:1012739","xrefs":{"Monarch":{"xref_id":"1012739"}}}


id: GO:0003242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenic growth in which the chambers of the heart expand in size, contributing to their shaping.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth involved in heart morphogenesis","termid":"GO:0003241"},{"relation_name":"part_of","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac chamber ballooning","termid":"GO:0003242"}


id: MONDO:0009138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysosteosclerosis is a skeletal dysplasia characterized by progressive osteosclerosis and platyspondyly.","definition_xrefs":["Orphanet:1782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis","termid":"MONDO:0017198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysosteosclerosis","secondary_identifiers":["MEDGEN:98150","OMIM:224300","NANDO:2201365","ICD9:756.9","icd11.foundation:1853176074","MESH:C562973","GARD:2012","SCTID:254123002","UMLS:C0432262"],"synonyms":[{"name":"dysosteosclerosis","type":"exact"}],"termid":"MONDO:0009138","xrefs":{"Monarch":{"xref_id":"0009138"}}}


id: FYPO:0005968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of sodium chloride than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"resistance to sodium chloride","synonyms":[{"name":"resistance to NaCl","type":"exact"},{"name":"resistance to sodium chloride during mitotic cell cycle","type":"related"},{"name":"resistance to sodium chloride during vegetative growth","type":"exact"},{"name":"resistant to sodium chloride","type":"exact"}],"termid":"FYPO:0005968"}


id: PR:O43071
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-processing factor 17 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03361","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-processing factor 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.10","secondary_identifiers":["UniProtKB:O43071"],"synonyms":[{"name":"Spom972h-CDC40","type":"exact"}],"termid":"PR:O43071"}


id: PBO:0040828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baculoviral IAP repeat containing 3","termid":"PBO:0040828"}


id: PR:000027505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitogen-activated protein kinase HOG1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitogen-activated protein kinase HOG1","termid":"PR:000027499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sty1/UnMod","pombase_gene_id":"SPAC24B11.06c","synonyms":[{"name":"PomBase_original_PRO_term_name: mitogen-activated protein kinase sty1 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-HOG1/UnMod","type":"exact"},{"name":"sty1/UnMod","type":"exact"}],"termid":"PR:000027505"}


id: MONDO:0019097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A hemorrhagic disorder due to a platelet anomaly which occurs from birth.","gene_count":0,"genotype_count":0,"name":"obsolete hemorrhagic disorder due to a constitutional platelet anomaly (obsolete MONDO:0019097)","secondary_identifiers":["Orphanet:71202"],"synonyms":[{"name":"rare bleeding disorder due to a constitutional platelet anomaly","type":"exact"},{"name":"rare bleeding disorder due to a constitutional thrombopathy and/or thrombocytopenia","type":"exact"},{"name":"rare coagulopathy due to a constitutional platelet anomaly","type":"exact"},{"name":"rare coagulopathy due to a constitutional thrombopathy and/or thrombocytopenia","type":"exact"},{"name":"rare hemorrhagic disorder due to a constitutional platelet anomaly","type":"exact"},{"name":"rare hemorrhagic disorder due to a constitutional thrombopathy and/or thrombocytopenia","type":"exact"}],"termid":"MONDO:0019097","xrefs":{"Monarch":{"xref_id":"0019097"}}}


id: GO:0043120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"tumor necrosis factor binding","termid":"GO:0043120"}


id: PBO:0113360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for uridine thiolation of Gln, Lys, and Glu tRNAs; required for the thiolation of uridine at the wobble position of Gln, Lys, and Glu tRNAs; has a role in urmylation and in invasive and pseudohyphal growth; inhibits replication of Brome mosaic virus in S. cerevisiae; localizes to cytosol and peroxisomes","termid":"PBO:0113360"}


id: MOD:01085
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-N-gluconoylation (His Tagged proteins)","termid":"MOD:01085"}


id: MONDO:0008116
data:
  {"annotated_genes":["SJAG_04601"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958176"}]},"cv_name":"mondo","definition":"Oculopharyngeal muscular dystrophy (OPMD) is an adult-onset progressive myopathy characterized by progressive eyelid ptosis, dysphagia, dysarthria and proximal limb weakness.","definition_xrefs":["Orphanet:270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy of extraocular muscle","termid":"MONDO:0004746"},{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"oculopharyngeal muscular dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200493","OMIMPS:164300","GARD:7245","SCTID:77097004","MEDGEN:75730","UMLS:C0270952","icd11.foundation:1354386293","MedDRA:10052181","MESH:D039141","DOID:11719"],"synonyms":[{"name":"OPMD","type":"exact"},{"name":"muscular dystrophy, oculopharyngeal","type":"exact"},{"name":"oculopharyngeal muscular dystrophy","type":"exact"}],"termid":"MONDO:0008116","terms_by_termid":{"MONDO:0958176":null},"xrefs":{"Monarch":{"xref_id":"0008116"}}}


id: GO:0102761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-eriodictyol + S-adenosyl-L-methionine = (S)-homoeriodictyol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:60948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"eriodictyol 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7753"],"termid":"GO:0102761"}


id: GO:0032501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process, occurring at the level of a multicellular organism, pertinent to its function.","definition_xrefs":["GOC:isa_complete","GOC:curators","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organismal process","secondary_identifiers":["GO:0044707","GO:0050874"],"synonyms":[{"name":"organismal physiological process","type":"exact"},{"name":"single-multicellular organism process","type":"related"}],"termid":"GO:0032501"}


id: GO:0014893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rest stimulus. This process occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to muscle inactivity involved in regulation of muscle adaptation","termid":"GO:0014877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to rest involved in regulation of muscle adaptation","termid":"GO:0014893"}


id: MOD:01788
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal L-histidine residue to histidine immonium ion.","definition_xrefs":["PubMed:17074506","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"residue reporter fragment","termid":"MOD:01527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine immonium ion","synonyms":[{"name":"2-(1H-imidazolyl)ethaniminium","type":"exact"}],"termid":"MOD:01788"}


id: GO:0072012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a glomerulus vasculature from an initial condition to its mature state. This process begins with the formation of the glomerulus vasculature and ends with the mature structure. The glomerulus vasculature is composed of the tubule structures that carry blood or lymph in the glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"},{"relation_name":"is_a","term_name":"kidney vasculature development","termid":"GO:0061440"},{"relation_name":"part_of","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerulus vasculature development","synonyms":[{"name":"glomerulus capillary development","type":"related"}],"termid":"GO:0072012"}


id: PBO:0038934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 1B (class I), beta polypeptide","termid":"PBO:0038934"}


id: GO:0047005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)+ + 16-alpha-hydroxysteroid = NAD(P)H + H+ + 16-oxosteroid.","definition_xrefs":["EC:1.1.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"16-alpha-hydroxysteroid dehydrogenase [NAD(P)+] activity","secondary_identifiers":["MetaCyc:1.1.1.147-RXN"],"synonyms":[{"name":"16alpha-hydroxy steroid dehydrogenase activity","type":"related"},{"name":"16alpha-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"16alpha-hydroxysteroid:NAD(P)+ 16-oxidoreductase activity","type":"related"}],"termid":"GO:0047005"}


id: SO:0001099
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with manganese ions.","definition_xrefs":["SO:cb","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_manganese_ion_contact_site","secondary_identifiers":["BS:00140"],"synonyms":[{"name":"Mn_contact_site","type":"exact"},{"name":"polypeptide manganese ion contact site","type":"exact"}],"termid":"SO:0001099"}


id: MOD:01065
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A modification produced in a non-enzymatic reaction between a carbohydrate carbonyl group (C1 of aldohexose or C2 of fructose) and a protein N-terminal amino group to form a Schiff-base or an Amadori ketosamine  (or aminoketose) residue adduct.","definition_xrefs":["DeltaMass:0","Unimod:41#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycated residue","termid":"MOD:00767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"hexose glycated N-terminal","termid":"MOD:01065"}


id: GO:0050384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(beta-D-ribofuranosyl)uric acid + phosphate = alpha-D-ribose 1-phosphate + H+ + urate.","definition_xrefs":["RHEA:13909","EC:2.4.2.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"urate-ribonucleotide phosphorylase activity","secondary_identifiers":["KEGG_REACTION:R02646","MetaCyc:URATE-RIBONUCLEOTIDE-PHOSPHORYLASE-RXN"],"synonyms":[{"name":"UAR phosphorylase activity","type":"related"},{"name":"urate-ribonucleotide:phosphate D-ribosyltransferase activity","type":"related"},{"name":"urate-ribonucleotide:phosphate alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0050384"}


id: MONDO:0850419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse large B-cell lymphoma that is characterized by the expression of CD10, BCL-6, A-myb, and LMO2 genes, BCL-2 translocation, and c-REL amplification.","definition_xrefs":["DOID:0080997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"diffuse large B-cell lymphoma germinal center B-cell type","secondary_identifiers":["NCIT:C36080","MEDGEN:234202","UMLS:C1333295"],"termid":"MONDO:0850419","xrefs":{"Monarch":{"xref_id":"0850419"}}}


id: PATO:0001127
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001127 work value (obsolete PATO:0001127)","termid":"PATO:0001127"}


id: PBO:0071730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 28","termid":"PBO:0071730"}


id: MONDO:0007700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hawkinsinuria is an inborn error of tyrosine metabolism characterized by failure to thrive, persistent metabolic acidosis, fine and sparse hair, and excretion of the unusual cyclic amino acid metabolite, hawkinsin ((2-l-cystein-S-yl, 4-dihydroxycyclohex-5-en-1-yl)acetic acid), in the urine.","definition_xrefs":["Orphanet:2118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of tyrosine metabolism","termid":"MONDO:0017307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"hawkinsinuria","secondary_identifiers":["OMIM:140350","SCTID:414380008","DOID:0111362","icd11.foundation:786595759","MEDGEN:419319","GARD:5668","UMLS:C2931042","MESH:C535845"],"synonyms":[{"name":"4-HPPD deficiency","type":"exact"},{"name":"4-alpha-hydroxyphenylpyruvate hydroxylase deficiency","type":"exact"},{"name":"4-hydroxyphenylpyruvic acid dioxygenase deficiency","type":"exact"},{"name":"hawkinsinuria","type":"exact"}],"termid":"MONDO:0007700","xrefs":{"Monarch":{"xref_id":"0007700"}}}


id: MONDO:0008002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial congenital mirror movements in which the cause of the disease is a mutation in the DCC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial congenital mirror movements","termid":"MONDO:0016558"},{"relation_name":"is_a","term_name":"mirror movements 1 and/or agenesis of the corpus callosum","termid":"MONDO:0100515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"mirror movements 1","secondary_identifiers":["MEDGEN:320461","OMIM:157600","GARD:15086","UMLS:C1834870"],"synonyms":[{"name":"DCC familial congenital mirror movements","type":"exact"},{"name":"MRMV1","type":"related"},{"name":"bimanual synergia","type":"related"},{"name":"familial congenital mirror movements caused by mutation in DCC","type":"exact"},{"name":"mirror movements 1","type":"exact"},{"name":"mirror movements 1 and/Or agenesis of the corpus callosum","type":"related"},{"name":"mirror movements type 1","type":"exact"},{"name":"mirror movements, congenital","type":"related"}],"termid":"MONDO:0008002","xrefs":{"Monarch":{"xref_id":"0008002"}}}


id: GO:1900228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of single-species biofilm formation in or on host organism.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation","termid":"GO:1900190"},{"relation_name":"regulates","term_name":"single-species biofilm formation in or on host organism","termid":"GO:0044407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of single-species biofilm formation in or on host organism","termid":"GO:1900228"}


id: MONDO:0015919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic neurometabolic disease with non-X-linked intellectual disability (obsolete MONDO:0015919)","secondary_identifiers":["Orphanet:182073"],"termid":"MONDO:0015919","xrefs":{"Monarch":{"xref_id":"0015919"}}}


id: GO:0005158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an insulin receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"insulin receptor binding","synonyms":[{"name":"insulin receptor ligand","type":"narrow"}],"termid":"GO:0005158"}


id: PR:O13849
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cpy1 gene.","definition_xrefs":["UniProtKB:O13849","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase Y (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.10c","synonyms":[{"name":"CPY (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cpy1","type":"exact"}],"termid":"PR:O13849"}


id: MONDO:1011226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, domestic cat","secondary_identifiers":["OMIA:000337-9685"],"termid":"MONDO:1011226","xrefs":{"Monarch":{"xref_id":"1011226"}}}


id: MONDO:1010710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trimethylaminuria (fishy taint) that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"trimethylaminuria (fishy taint), non-human animal","termid":"MONDO:1010104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimethylaminuria (fishy taint), chicken","secondary_identifiers":["OMIA:001360-9031"],"termid":"MONDO:1010710","xrefs":{"Monarch":{"xref_id":"1010710"}}}


id: PBO:0049983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia inducible lipid droplet associated","termid":"PBO:0049983"}


id: PBO:0053461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 421","termid":"PBO:0053461"}


id: GO:1902558
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"}]},"cv_name":"biological_process","definition":"The process in which 5'-adenylyl sulfate is transported across a membrane.","definition_xrefs":["PMID:24296033","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"5'-adenylyl sulfate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 5'-phosphosulfate transmembrane transport","type":"exact"}],"termid":"GO:1902558","terms_by_termid":{"GO:1990553":null}}


id: PBO:0046815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid 2-hydroxylase","termid":"PBO:0046815"}


id: GO:0047439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-deoxy-D-manno-octulosonate = D-arabinose + pyruvate.","definition_xrefs":["RHEA:23340","EC:4.1.2.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"3-deoxy-D-manno-octulosonate aldolase activity","secondary_identifiers":["MetaCyc:4.1.2.23-RXN","KEGG_REACTION:R01576"],"synonyms":[{"name":"2-keto-3-deoxyoctonate aldolase activity","type":"related"},{"name":"2-keto-3-deoxyoctonic aldolase activity","type":"related"},{"name":"3-deoxy-D-manno-octulosonate D-arabinose-lyase (pyruvate-forming)","type":"related"},{"name":"3-deoxy-D-manno-octulosonate D-arabinose-lyase activity","type":"related"},{"name":"3-deoxy-D-manno-octulosonic aldolase activity","type":"related"},{"name":"3-deoxyoctulosonic aldolase activity","type":"related"},{"name":"KDOaldolase activity","type":"related"}],"termid":"GO:0047439"}


id: PR:O42897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02558","PANTHER:PTHR10758:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.01","secondary_identifiers":["UniProtKB:O42897"],"synonyms":[{"name":"Spom972h-PSMD3","type":"exact"}],"termid":"PR:O42897"}


id: PBO:0116412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 7","termid":"PBO:0116412"}


id: PBO:0004531
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.15","termid":"PBO:0004531"}


id: GO:0048726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the labrum over time, from its formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labrum development","termid":"GO:0048726"}


id: MONDO:0037746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that arises from the vagina and is characterized by the presence of an epithelial and a mesenchymal component. This category includes adenosarcoma, carcinosarcoma, and malignant mixed tumor resembling synovial sarcoma.","definition_xrefs":["NCIT:C40276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal cancer","termid":"MONDO:0001402"},{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant vaginal mixed epithelial and mesenchymal neoplasm","secondary_identifiers":["MEDGEN:307683","UMLS:C1512974"],"synonyms":[{"name":"malignant vaginal mixed epithelial and mesenchymal neoplasm","type":"exact"},{"name":"malignant vaginal mixed epithelial and mesenchymal tumor","type":"exact"},{"name":"malignant vaginal mixed epithelial and mesenchymal tumour","type":"exact"}],"termid":"MONDO:0037746","xrefs":{"Monarch":{"xref_id":"0037746"}}}


id: GO:0072727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a CCCP stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to CCCP (obsolete GO:0072727)","synonyms":[{"name":"cellular response to carbonyl cyanide m-chlorophenyl hydrazone","type":"exact"}],"termid":"GO:0072727"}


id: GO:0075240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of zoospore formation, a process in which a diploid cell undergoes meiosis, and the meiotic products acquire specialized features of asexual motile mononucleate flagellated spores called zoospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangiospore formation","termid":"GO:0075286"},{"relation_name":"regulates","term_name":"zoospore formation","termid":"GO:0075239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of zoospore formation","termid":"GO:0075240"}


id: PR:Q9P7Q6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug51 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Q6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 51 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.09","synonyms":[{"name":"Spom972h-mug51","type":"exact"}],"termid":"PR:Q9P7Q6"}


id: PBO:0078574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51H, pseudogene","termid":"PBO:0078574"}


id: MONDO:0003764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises from leptomeningeal melanocytes and occurs in childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pediatric meningioma","termid":"MONDO:0003057"},{"relation_name":"is_a","term_name":"leptomeningeal melanoma","termid":"MONDO:0003761"},{"relation_name":"is_a","term_name":"childhood malignant melanoma","termid":"MONDO:0042494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric leptomeningeal melanoma","secondary_identifiers":["MEDGEN:232061","DOID:6089","NCIT:C5318","UMLS:C1332976"],"synonyms":[{"name":"childhood leptomeningeal melanoma","type":"exact"},{"name":"childhood meningeal melanoma","type":"exact"},{"name":"paediatric meningeal melanoma","type":"exact"},{"name":"pediatric meningeal melanoma","type":"exact"}],"termid":"MONDO:0003764","xrefs":{"Monarch":{"xref_id":"0003764"}}}


id: MONDO:0012290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CEDNIK syndrome is a neurocutaneaous syndrome characterized by severe developmental abnormalities of the nervous system and aberrant differentiation of the epidermis.","definition_xrefs":["Orphanet:66631"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"CEDNIK syndrome","secondary_identifiers":["DOID:0060337","MEDGEN:332113","MESH:C537943","GARD:9940","OMIM:609528","SCTID:722385008","UMLS:C1836033"],"synonyms":[{"name":"CEDNIK syndrome","type":"exact"},{"name":"cerebral dysgenesis, neuropathy, ichthyosis and keratoderma syndrome","type":"exact"},{"name":"cerebral dysgenesis, neuropathy, ichthyosis, and palmoplantar keratoderma syndrome","type":"related"},{"name":"cerebral dysgenesis-neuropathy-ichthyosis-palmoplantar keratoderma syndrome","type":"exact"}],"termid":"MONDO:0012290","xrefs":{"Monarch":{"xref_id":"0012290"}}}


id: FYPO:0000289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype that affects the regulation of translation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype","termid":"FYPO:0000288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"translation regulation phenotype","synonyms":[{"name":"fission yeast translation regulation phenotype","type":"exact"}],"termid":"FYPO:0000289"}


