# terms

id: FYPO:0001899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain fewer cytoplasmic mRNA processing bodies (P-bodies) than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-bodies present in decreased numbers","termid":"FYPO:0001898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"P-bodies present in decreased numbers during glucose starvation","synonyms":[{"name":"P bodies present in decreased numbers during glucose starvation","type":"exact"},{"name":"P-bodies present in decreased numbers during glucose depletion","type":"exact"},{"name":"P-bodies present in decreased numbers during glucose deprivation","type":"exact"},{"name":"P-bodies present in decreased numbers during glucose limitation","type":"related"},{"name":"P-bodies present in reduced numbers during glucose starvation","type":"exact"},{"name":"cytoplasmic mRNA processing bodies present in decreased numbers during glucose starvation","type":"exact"},{"name":"decreased P-body formation during glucose starvation","type":"related"},{"name":"decreased P-body number during glucose starvation","type":"exact"},{"name":"decreased number of P-bodies present during glucose starvation","type":"exact"},{"name":"fewer P-bodies present during glucose starvation","type":"exact"}],"termid":"FYPO:0001899"}


id: GO:0085021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type I secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by type I secretion system (obsolete GO:0085021)","termid":"GO:0085021"}


id: GO:0038068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate, as part of a MAPK signaling cascade that contributes to cell wall organization or biogenesis.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase activity involved in cell wall organization or biogenesis (obsolete GO:0038068)","synonyms":[{"name":"MAP kinase kinase activity involved in cell wall biogenesis","type":"narrow"},{"name":"MAP2K activity involved in cell wall integrity","type":"exact"},{"name":"MAPKK activity involved in cell wall integrity","type":"exact"}],"termid":"GO:0038068"}


id: FYPO:0004033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at tRNA genes is increased.","definition_xrefs":["PMID:25392932","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at ncRNA genes","termid":"FYPO:0007011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin at tRNA genes","synonyms":[{"name":"increased protein localisation to chromatin at tRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at tRNA genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at transfer RNA genes","type":"exact"}],"termid":"FYPO:0004033"}


id: PBO:0077601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11C, pseudogene","termid":"PBO:0077601"}


id: PBO:0091317
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana AtSGP2","termid":"PBO:0091317"}


id: GO:0009336
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the formation adenylylsulfate from sulfate and ATP.","definition_xrefs":["PMID:15184554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase complex","termid":"GO:1902503"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"sulfate adenylyltransferase complex (ATP)","synonyms":[{"name":"sulphate adenylyltransferase complex (ATP)","type":"exact"}],"termid":"GO:0009336"}


id: PBO:0067500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 636, pseudogene","termid":"PBO:0067500"}


id: GO:0019920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of internal peptidyl-1-thioglycine, which has an internal C=S bond, instead of an internal C=O bond, in the peptide.","definition_xrefs":["GOC:go_curators","PMID:10660523","RESID:AA0265"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-1-thioglycine biosynthetic process, internal (obsolete GO:0019920)","synonyms":[{"name":"peptidyl-1-thioglycine anabolism, internal","type":"exact"},{"name":"peptidyl-1-thioglycine formation, internal","type":"exact"},{"name":"peptidyl-1-thioglycine synthesis, internal","type":"exact"}],"termid":"GO:0019920"}


id: GO:0036343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism that combines cognitive functions and physical movement. For example, driving a car, throwing a ball, or playing a musical instrument.","definition_xrefs":["Wikipedia:Psychomotor_learning","PMID:17159989","GOC:pr","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"motor behavior","termid":"GO:0061744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"psychomotor behavior","termid":"GO:0036343"}


id: PBO:0062837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 3","termid":"PBO:0062837"}


id: GO:0010924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate or frequency of inositol-polyphosphate 5-phosphatase activity, the catalysis of the reactions: D-myo-inositol 1,4,5-trisphosphate + H2O = myo-inositol 1,4-bisphosphate + phosphate, and 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,3,4-trisphosphate + phosphate.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of inositol-polyphosphate 5-phosphatase activity (obsolete GO:0010924)","termid":"GO:0010924"}


id: GO:0021858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuroblast acquires the specialized structural and functional features of a GABAergic inhibitory neuron in the basal ganglia. Differentiation includes the processes involved in commitment of a neuroblast to a GABAergic neuron.","definition_xrefs":["GOC:dph","PMID:16226447","GOC:jid","GOC:cls","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"GABAergic neuron differentiation in basal ganglia","termid":"GO:0021858"}


id: GO:0048018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a gene product that interacts with a receptor to effect a change in the activity of the receptor. Ligands may be produced by the same cell that expresses the receptor. Ligands may also be expressed at the plasma membrane of an adjacent cell (e.g. Notch ligands) or be secreted and diffuse extracellularly from their point of origin to the receiving cell (e.g. interleukins).","definition_xrefs":["GOC:pdt","GOC:kv","GOC:molecular_function_refactoring"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"signaling receptor activator activity","termid":"GO:0030546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0140677","GO:0005515","GO:0003674","GO:0098772","GO:0005488"],"is_obsolete":false,"name":"receptor ligand activity","secondary_identifiers":["Reactome:R-HSA-381612","GO:0071884","Reactome:R-HSA-163625"],"synonyms":[{"name":"receptor agonist activity","type":"broad"},{"name":"signaling molecule","type":"exact"},{"name":"signaling receptor ligand activity","type":"exact"}],"termid":"GO:0048018"}


id: PBO:0078699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAA) 1-2","termid":"PBO:0078699"}


id: MONDO:0007910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein types--Lt system","secondary_identifiers":["UMLS:C1835359","MEDGEN:322644","OMIM:152300"],"synonyms":[{"name":"lipoprotein types--Lt system","type":"exact"}],"termid":"MONDO:0007910","xrefs":{"Monarch":{"xref_id":"0007910"}}}


id: GO:0035065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the addition of an acetyl group to a histone protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone acetylation (obsolete GO:0035065)","termid":"GO:0035065"}


id: GO:0033622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of an integrin, a heterodimeric adhesion receptor formed by the non-covalent association of particular alpha and beta subunits, that lead to the increased affinity of the integrin for its extracellular ligands.","definition_xrefs":["GOC:add","PMID:12213832","PMID:14754902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"integrin activation","synonyms":[{"name":"integrin complex activation","type":"exact"},{"name":"integrin complex assembly","type":"exact"}],"termid":"GO:0033622"}


id: PBO:0091316
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana AtSGP1","termid":"PBO:0091316"}


id: GO:0098780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) in response to the depolarization of one or more mitochondria.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitochondrial depolarisation","secondary_identifiers":["Reactome:R-HSA-9840373"],"termid":"GO:0098780"}


id: GO:0019548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including spermine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine catabolic process","termid":"GO:0006527"},{"relation_name":"is_a","term_name":"spermine metabolic process","termid":"GO:0008215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"arginine catabolic process to spermine","secondary_identifiers":["MetaCyc:ARGSPECAT-PWY"],"synonyms":[{"name":"arginine breakdown to spermine","type":"exact"},{"name":"arginine degradation to spermine","type":"exact"}],"termid":"GO:0019548"}


id: PBO:0091298
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CRD1","termid":"PBO:0091298"}


id: GO:0031088
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the platelet dense granule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"platelet dense granule","termid":"GO:0042827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"platelet dense granule membrane","termid":"GO:0031088"}


id: MONDO:0015567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cataract-glaucoma syndrome is characterized by the association of total bilateral congenital cataract with the secondary occurrence of glaucoma appearing at ages varying between 10 and 40 years.","definition_xrefs":["Orphanet:162"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic developmental defect of the eye (obsolete MONDO:0015217)","termid":"MONDO:0015217"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cataract-glaucoma syndrome","secondary_identifiers":["MEDGEN:930800","UMLS:C4305131","SCTID:718851007","GARD:1160"],"synonyms":[{"name":"cataract - glaucoma","type":"exact"}],"termid":"MONDO:0015567","xrefs":{"Monarch":{"xref_id":"0015567"}}}


id: PBO:0027972
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_succinate_dehydrogenase_(ubiquinone)_activity","termid":"PBO:0027972"}


id: GO:0005304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-valine from one side of a membrane to the other. L-valine is 2-amino-3-methylbutanoic acid.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"branched-chain amino acid transmembrane transporter activity","termid":"GO:0015658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-valine transmembrane transporter activity","synonyms":[{"name":"L-valine transporter activity","type":"broad"},{"name":"isoleucine/valine:sodium symporter activity","type":"narrow"},{"name":"leucine/isoleucine/valine porter activity","type":"narrow"},{"name":"leucine/valine/isoleucine permease activity","type":"narrow"},{"name":"valine/tyrosine/tryptophan permease activity","type":"narrow"}],"termid":"GO:0005304"}


id: PR:O94374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- imp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin subunit alpha-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.08c","synonyms":[{"name":"Spom972h-imp1","type":"exact"},{"name":"importin-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"karyopherin subunit alpha-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94374"}


id: GO:0006071
data:
  {"annotated_genes":["SJAG_04048","SJAG_04320","SJAG_03609","SJAG_01012","SJAG_00409","SJAG_04192"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65816],"is_not":false,"summary":null,"term":"GO:0006071"},{"annotations":[88928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[94307,106866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"},{"annotations":[72471,78972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[88929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null,"SJAG_03609":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"glycerol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:GLYCEROLMETAB-PWY"],"synonyms":[{"name":"glycerol metabolism","type":"exact"}],"termid":"GO:0006071","terms_by_termid":{"GO:0006071":null,"GO:0006114":null,"GO:0019563":null,"GO:0019564":null,"GO:0061613":null}}


id: GO:0014881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of myofibrils. A myofibril is the contractile element of skeletal and cardiac muscle. It is a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism.","definition_xrefs":["GOC:dph","GOC:mtg_muscle","GOC:tb","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hypertrophy","termid":"GO:0014743"},{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myofibril size","synonyms":[{"name":"change of myofibril size","type":"exact"}],"termid":"GO:0014881"}


id: PBO:0116728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRB antisense RNA 1","termid":"PBO:0116728"}


id: FYPO:0000725
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of methyl methanesulfonate than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to methyl methanesulfonate","synonyms":[{"name":"resistance to MMS","type":"exact"},{"name":"resistance to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistance to methyl methanesulphonate","type":"exact"},{"name":"resistant to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0000725"}


id: PBO:0069660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 937, pseudogene","termid":"PBO:0069660"}


id: PBO:0111328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Nop58","termid":"PBO:0111328"}


id: SO:0000271
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a tryptophan anticodon, and a 3' tryptophan binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tryptophan_tRNA_primary_transcript","termid":"SO:0000228"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophanyl_tRNA","synonyms":[{"name":"tryptophanyl tRNA","type":"exact"},{"name":"tryptophanyl-transfer RNA","type":"exact"},{"name":"tryptophanyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000271"}


id: PBO:0034054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-continuous_with","termid":"PBO:0034054"}


id: MONDO:0015942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Frontometaphyseal dysplasia (FMD) belongs to the otopalatodigital syndrome spectrum disorder and is characterized by anomalous ossification and skeletal patterning of the axial and appendicular skeleton, facial dysmorphism and conductive and sensorineural hearing loss.","definition_xrefs":["Orphanet:1826"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"otopalatodigital syndrome spectrum disorder","termid":"MONDO:0018233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontometaphyseal dysplasia","secondary_identifiers":["ICD9:759.89","MEDGEN:82703","SCTID:62803002","MESH:C538064","icd11.foundation:1767187670","OMIMPS:305620","UMLS:C0265293","DOID:0111785","GARD:826"],"synonyms":[{"name":"FMD","type":"related"},{"name":"frontometaphyseal dysplasia","type":"exact"}],"termid":"MONDO:0015942","xrefs":{"Monarch":{"xref_id":"0015942"}}}


id: PBO:0075734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP14 pseudogene 2","termid":"PBO:0075734"}


id: GO:0046027
data:
  {"annotated_genes":["SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74911],"is_not":false,"summary":null,"term":"GO:0046027"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a glycerophospholipid + a 1,2-diacyl-sn-glycerol = a monoacylglycerophospholipid + a triacyl-sn-glycerol.","definition_xrefs":["RHEA:14057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"phospholipid:diacylglycerol acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.3.1.158","MetaCyc:2.3.1.158-RXN"],"synonyms":[{"name":"PDAT activity","type":"related"},{"name":"phospholipid:1,2-diacyl-sn-glycerol O-acyltransferase activity","type":"related"}],"termid":"GO:0046027","terms_by_termid":{"GO:0046027":null}}


id: PBO:0049922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase for meiosis 1","termid":"PBO:0049922"}


id: PBO:0026844
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_cytokinesis_gene_mRNA_during_vegetative_growth","termid":"PBO:0026844"}


id: MONDO:0700099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma, non-human animal","termid":"MONDO:0700101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenocarcinoma, non-human animal","termid":"MONDO:0700099","xrefs":{"Monarch":{"xref_id":"0700099"}}}


id: PBO:0077890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p63 regulated 1 like pseudogene 1","termid":"PBO:0077890"}


id: GO:1904645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a amyloid-beta stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:23555824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amyloid-beta","synonyms":[{"name":"response to beta-amyloid","type":"exact"},{"name":"response to beta-amyloids","type":"related"}],"termid":"GO:1904645"}


id: PBO:0063908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha","termid":"PBO:0063908"}


id: PBO:0065721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader Willi/Angelman region RNA, SNRPN neighbor","termid":"PBO:0065721"}


id: PBO:0043397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"c-Maf inducing protein","termid":"PBO:0043397"}


id: MONDO:0010109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraamelia with ectodermal dysplasia and lacrimal duct abnormalities","secondary_identifiers":["UMLS:C2931214","MEDGEN:444003","MESH:C536496","OMIM:273390"],"synonyms":[{"name":"Madokoro Ohdo Sonoda syndrome","type":"related"},{"name":"tetra-amelia, ectodermal dysplasia, and lacrimal duct abnormality","type":"related"},{"name":"tetraamelia with ectodermal dysplasia and lacrimal duct abnormalities","type":"exact"}],"termid":"MONDO:0010109","xrefs":{"Monarch":{"xref_id":"0010109"}}}


id: PBO:0042218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin P","termid":"PBO:0042218"}


id: PBO:0042367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD164 molecule like 2","termid":"PBO:0042367"}


id: PBO:0077550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 258","termid":"PBO:0077550"}


id: FYPO:0004564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha-galactosidase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal alpha-galactosidase activity","termid":"FYPO:0004563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"increased alpha-galactosidase activity","termid":"FYPO:0004564"}


id: GO:0007429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Sprouting of secondary branches in an open tracheal system. These form from the tips of primary branches and are formed by individual cells that roll up into unicellular tubes. An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:29844090","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching involved in open tracheal system development","termid":"GO:0060446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary branching, open tracheal system","synonyms":[{"name":"secondary tracheal branching","type":"exact"}],"termid":"GO:0007429"}


id: PBO:0046087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A1 pseudogene 12","termid":"PBO:0046087"}


id: GO:0046546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary male sexual characteristics over time, from their formation to the mature structures. The primary male sexual characteristics are the testes, and they develop in response to sex hormone secretion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of primary sexual characteristics","termid":"GO:0045137"},{"relation_name":"part_of","term_name":"male sex differentiation","termid":"GO:0046661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of primary male sexual characteristics","termid":"GO:0046546"}


id: GO:0160057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a plant endodermal cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["PMID:26415082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant endodermal cell fate specification","termid":"GO:0160057"}


id: FYPO:0000654
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[120032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007363"},{"annotations":[119951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects a catalytic activity.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function phenotype","termid":"FYPO:0000652"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01458":null,"SJAG_02796":null},"genotype_count":2,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]},"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"catalytic activity phenotype","references_by_uniquename":{"PMID:31956022":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_01458","SJAG_02796"],"single_locus_genotype_uniquenames":["pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","acb1delta"],"synonyms":[{"name":"enzymatic activity phenotype","type":"exact"},{"name":"fission yeast catalytic activity phenotype","type":"exact"}],"termid":"FYPO:0000654","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0000719":null,"FYPO:0007363":null,"FYPO_EXT:0000002":null}}


id: PBO:0086712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutant has decreased Ty3 transposition; YLR125W is not an essential gene","termid":"PBO:0086712"}


id: MONDO:0033622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 44","secondary_identifiers":["DOID:0112109","OMIM:619044","UMLS:C5436678","MEDGEN:1750188"],"synonyms":[{"name":"SPGF44","type":"exact"}],"termid":"MONDO:0033622","xrefs":{"Monarch":{"xref_id":"0033622"}}}


id: PBO:0083563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene YEL020W-A; identified by fungal homology and RT-PCR","termid":"PBO:0083563"}


id: GO:0032335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of activin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone secretion","termid":"GO:0046883"},{"relation_name":"regulates","term_name":"activin secretion","termid":"GO:0032333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of activin secretion","termid":"GO:0032335"}


id: PBO:0031330
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_chloramphenicol","termid":"PBO:0031330"}


id: PATO:0015002
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The ability of a process to produce its output.","definition_xrefs":["PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"process efficacy","termid":"PATO:0015002"}


id: PBO:0084091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor (GEF) for ADP ribosylation factors; involved in proliferation of the Golgi, intra-Golgi transport and ER-to-Golgi transport; found in the cytoplasm and on Golgi-associated coated vesicles","termid":"PBO:0084091"}


id: GO:1990720
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"One of two microtubules present in the axonemal central pair. It is distinguishable from the C1 axonemal microtubule (also called C1 tubule) by the presence of differing protein components of the projections.","definition_xrefs":["GOC:cilia","PMID:9295136","PMID:21586547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal microtubule","termid":"GO:0005879"},{"relation_name":"part_of","term_name":"axonemal central pair","termid":"GO:0097540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0015630","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"C2 axonemal microtubule","synonyms":[{"name":"C2 tubule","type":"broad"}],"termid":"GO:1990720"}


id: GO:0044450
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a microtubule organizing center, a region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule organizing center part (obsolete GO:0044450)","synonyms":[{"name":"MTOC component","type":"exact"},{"name":"microtubule organizing centre component","type":"exact"}],"termid":"GO:0044450"}


id: PBO:0060229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYADM antisense RNA 1","termid":"PBO:0060229"}


id: MONDO:0019083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Leigh syndrome","termid":"MONDO:0009723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"Leigh syndrome with cardiomyopathy","secondary_identifiers":["Orphanet:70474","GARD:16685","icd11.foundation:583594497"],"synonyms":[{"name":"Leigh disease with myopathy","type":"exact"},{"name":"cardiomyopathy with hypotonia due to cytochrome C oxidase deficiency","type":"exact"},{"name":"cardiomyopathy with myopathy due to COX deficiency","type":"exact"}],"termid":"MONDO:0019083","xrefs":{"Monarch":{"xref_id":"0019083"}}}


id: PBO:0039947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 5B","termid":"PBO:0039947"}


id: PBO:0004590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine deaminase subunit Tad2","termid":"PBO:0004590"}


id: PBO:0117037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP6 antisense RNA 1","termid":"PBO:0117037"}


id: GO:0018798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gallate + H+ = CO2 + pyrogallol.","definition_xrefs":["RHEA:12749","EC:4.1.1.59"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"gallate decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03247","MetaCyc:GALLATE-DECARBOXYLASE-RXN","UM-BBD_reactionID:r0005"],"synonyms":[{"name":"gallate carboxy-lyase (pyrogallol-forming)","type":"related"},{"name":"gallate carboxy-lyase activity","type":"related"},{"name":"gallic acid decarboxylase activity","type":"exact"}],"termid":"GO:0018798"}


id: PBO:0068014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 319","termid":"PBO:0068014"}


id: SO:0000490
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one VJ-gene, one J-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VJ_J_C_cluster","synonyms":[{"name":"(VJ)-J-C-CLUSTER","type":"exact"},{"name":"VJ J C cluster","type":"exact"}],"termid":"SO:0000490"}


id: FYPO:0000175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which ascospore wall assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"},{"relation_name":"is_a","term_name":"abnormal ascospore wall biogenesis","termid":"FYPO:0000580"},{"relation_name":"is_a","term_name":"abnormal cell wall organization","termid":"FYPO:0004805"},{"relation_name":"part_of","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0004805"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000121","FYPO:0000002","FYPO:0005447","FYPO:0004805"],"is_obsolete":false,"name":"abnormal ascospore wall assembly","synonyms":[{"name":"abnormal ascospore wall organization","type":"related"},{"name":"abnormal spore wall formation","type":"related"},{"name":"spore wall formation: abnormal","type":"related"}],"termid":"FYPO:0000175"}


id: PBO:0039447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and kinase domain containing 1","termid":"PBO:0039447"}


id: PBO:0059545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Leu (CUN) 2","termid":"PBO:0059545"}


id: MONDO:0002573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pleomorphic rhabdomyosarcoma (obsolete MONDO:0002573)","termid":"MONDO:0002573","xrefs":{"Monarch":{"xref_id":"0002573"}}}


id: GO:0010157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chlorate stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to chlorate","termid":"GO:0010157"}


id: PATO:0001621
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A turgor which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"turgor","termid":"PATO:0001620"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased turgor","synonyms":[{"name":"low turgor","type":"exact"}],"termid":"PATO:0001621"}


id: FYPO:0006456
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle is abolished during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"},{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"},{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to meiotic spindle during meiosis II","synonyms":[{"name":"abolished protein localisation to meiotic spindle during meiosis II","type":"exact"},{"name":"abolished protein localization to meiosis II spindle","type":"exact"},{"name":"abolished protein localization to meiotic spindle pole body during second meiotic nuclear division","type":"exact"},{"name":"abolished protein localization to spindle during meiosis II","type":"exact"},{"name":"protein localization to meiotic spindle abolished during meiosis II","type":"exact"}],"termid":"FYPO:0006456"}


id: PBO:0061921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily F member 1","termid":"PBO:0061921"}


id: MONDO:0976236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurodegenerative disorder, X-linked, female-restricted, with parkinsonism and cognitive impairment","secondary_identifiers":["OMIM:301142"],"termid":"MONDO:0976236","xrefs":{"Monarch":{"xref_id":"0976236"}}}


id: GO:1903932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA primase activity.","definition_xrefs":["PMID:14766746","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA primase activity (obsolete GO:1903932)","termid":"GO:1903932"}


id: MONDO:0014930
data:
  {"annotated_genes":["SJAG_03448"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87476],"is_not":false,"summary":null,"term":"MONDO:0014930"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the ZC3H14 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03448":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 56","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22574","MEDGEN:934670","UMLS:C4310703","OMIM:617125","DOID:0081217"],"synonyms":[{"name":"MRT56","type":"exact"},{"name":"ZC3H14 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in ZC3H14","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 56","type":"exact"},{"name":"intellectual disability, autosomal recessive 56","type":"exact"},{"name":"intellectual disability, autosomal recessive type 56","type":"exact"},{"name":"mental retardation, autosomal recessive 56","type":"exact"},{"name":"mental retardation, autosomal recessive type 56","type":"exact"}],"termid":"MONDO:0014930","terms_by_termid":{"MONDO:0014930":null},"xrefs":{"Monarch":{"xref_id":"0014930"}}}


id: PBO:0046471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erbb2 interacting protein","termid":"PBO:0046471"}


id: MONDO:1012170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lower motor neuron disease, non-human animal","termid":"MONDO:1011848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower motor neuron disease, sheep","secondary_identifiers":["OMIA:000662-9940"],"termid":"MONDO:1012170","xrefs":{"Monarch":{"xref_id":"1012170"}}}


id: PR:O94252
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rng9 gene.","definition_xrefs":["UniProtKB:O94252","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.02","synonyms":[{"name":"Spom972h-rng9","type":"exact"}],"termid":"PR:O94252"}


id: GO:0030143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle that mediates transport of cargo within the Golgi complex (for example, between cisternae of the Golgi stack).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"COPI-coated vesicle","termid":"GO:0030137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"COPI-coated inter-Golgi transport vesicle","secondary_identifiers":["GO:0005807","NIF_Subcellular:sao1382918459"],"synonyms":[{"name":"inter-Golgi transport constitutive secretory pathway transport vesicle","type":"exact"}],"termid":"GO:0030143"}


id: PBO:0109033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MESD pseudogene 1","termid":"PBO:0109033"}


id: FYPO:0001783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is longer than normal and is constricted in the middle, resembling a figure 8.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated nucleus during vegetative growth","termid":"FYPO:0000832"},{"relation_name":"has_part","term_name":"constricted nucleus","termid":"FYPO:0001782"},{"relation_name":"is_a","term_name":"elongated nucleus during vegetative growth","termid":"FYPO:0000832"},{"relation_name":"is_a","term_name":"constricted nucleus","termid":"FYPO:0001782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002403","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"elongated, constricted nucleus","synonyms":[{"name":"elongated, constricted nuclei","type":"exact"},{"name":"elongated, constricted nucleus during mitotic cell cycle","type":"related"},{"name":"elongated, constricted nucleus during vegetative growth","type":"exact"},{"name":"long constricted nucleus","type":"exact"}],"termid":"FYPO:0001783"}


id: PBO:0005699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L27 (predicted)","termid":"PBO:0005699"}


id: MONDO:0019454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myelodysplastic syndrome characterized by the presence of 5-19% myeloblasts in the bone marrow or 2-19% blasts in the peripheral blood. It includes two categories: myelodysplastic syndrome with excess blasts-1 and myelodysplastic syndrome with excess blasts-2.","definition_xrefs":["NCIT:C7506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelodysplastic syndrome","termid":"MONDO:0018881"},{"relation_name":"is_a","term_name":"hematopoietic and lymphoid cell neoplasm","termid":"MONDO:0044881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myelodysplastic syndrome with excess blasts","secondary_identifiers":["ICDO:9983/3","EFO:0003811","SCTID:398623004","MedDRA:10038270","MEDGEN:8066","Orphanet:86839","UMLS:C0002894","GARD:19070","MESH:D000754"],"synonyms":[{"name":"MDS-EB","type":"exact"},{"name":"RAEB","type":"exact"},{"name":"myelodysplastic syndrome with Excess blasts","type":"exact"},{"name":"refractory Anaemia with Excess blasts","type":"exact"},{"name":"refractory Anaemia with an Excess of blasts","type":"exact"},{"name":"refractory Anemia with Excess blasts","type":"exact"},{"name":"refractory Anemia with an Excess of blasts","type":"exact"}],"termid":"MONDO:0019454","xrefs":{"Monarch":{"xref_id":"0019454"}}}


id: PBO:0029503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_elongated,_curved_germ_tube","termid":"PBO:0029503"}


id: PBO:0043464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 4 pseudogene 1","termid":"PBO:0043464"}


id: PBO:0049457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 1 pseudogene 2","termid":"PBO:0049457"}


id: GO:1901575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of an organic substance, any molecular entity containing carbon.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete organic substance catabolic process (obsolete GO:1901575)","synonyms":[{"name":"organic molecular entity catabolic process","type":"exact"},{"name":"organic substance breakdown","type":"exact"},{"name":"organic substance catabolism","type":"exact"},{"name":"organic substance degradation","type":"exact"}],"termid":"GO:1901575"}


id: GO:1900008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of extrachromosomal rDNA circle accumulation involved in replicative cell aging.","definition_xrefs":["GOC:TermGenie","PMID:15020466"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging (obsolete GO:1900008)","synonyms":[{"name":"down regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"down regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"down regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging","type":"related"},{"name":"down regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"},{"name":"negative regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"negative regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"negative regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"}],"termid":"GO:1900008"}


id: PR:000049982
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair protein rad9 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Thr-412 and Ser-423 of the amino acid sequence represented by UniProtKB:P26306. Example: UniProtKB:P26306, Thr-412/Ser-423, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:21561865","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair protein rad9 (Schizosaccharomyces pombe)","termid":"PR:000044575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rad9/Phos(T412,S423)","pombase_gene_id":"SPAC664.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA repair protein rad9 phosphorylated 3 (Schizosaccharomyces pombe)","type":"exact"},{"name":"rad9/Phos(T412,S423)","type":"exact"}],"termid":"PR:000049982"}


id: MONDO:0020535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"House allergic alveolitis is a hypersensitivity pneumonitis resulting from the inhalation of an antigen to which an individual has been previously sensitized in his/her domestic environment. House allergic alveolitis encompasses summer hypersensitivity pneumonitis, humidifier-induced lung diseases, hot tub lung and legionellosis.","definition_xrefs":["Orphanet:99907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"house allergic alveolitis","secondary_identifiers":["MEDGEN:1387737","SCTID:725415009","UMLS:C4511048","GARD:19703","icd11.foundation:1985023223"],"termid":"MONDO:0020535","xrefs":{"Monarch":{"xref_id":"0020535"}}}


id: GO:0016186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Separation of a synaptic vesicle from the presynaptic membrane.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle fission (obsolete GO:0016186)","synonyms":[{"name":"synaptic vesicle fission","type":"exact"}],"termid":"GO:0016186"}


id: PBO:0042090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 159","termid":"PBO:0042090"}


id: GO:0047639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a primary alcohol + O2 = an aldehyde + H2O2.","definition_xrefs":["EC:1.1.3.13","MetaCyc:ALCOHOL-OXIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"alcohol oxidase activity","secondary_identifiers":["RHEA:19829"],"synonyms":[{"name":"AOX activity","type":"related"},{"name":"alcohol:oxygen oxidoreductase activity","type":"related"},{"name":"ethanol oxidase activity","type":"related"}],"termid":"GO:0047639"}


id: PBO:0043362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calsyntenin 3","termid":"PBO:0043362"}


id: FYPO:0001100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing Gentian violet (also known as crystal violet).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on Gentian violet","synonyms":[{"name":"normal cell population growth in presence of Gentian violet","type":"exact"},{"name":"normal cell population growth on Gentian violet","type":"exact"},{"name":"normal cell population growth on crystal violet","type":"exact"},{"name":"normal cell population growth on {4-[Bis-(4-dimethylamino-phenyl)-methylene]-cyclohexa-2,5-dienylidene}-dimethyl-ammonium chloride","type":"exact"},{"name":"normal vegetative cell population growth on Gentian violet","type":"exact"}],"termid":"FYPO:0001100"}


id: FYPO:0002232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that have a larger volume than normal and are curved along the long axis. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, swollen curved cells (obsolete FYPO:0002232)","synonyms":[{"name":"inviable microcolony, curved cells with increased cell size","type":"related"},{"name":"inviable microcolony, curved cells with increased cell volume","type":"exact"},{"name":"inviable microcolony, enlarged curved cells","type":"related"},{"name":"inviable microcolony, large curved cells","type":"related"},{"name":"inviable microcolony, swollen curved vegetative cells","type":"exact"}],"termid":"FYPO:0002232"}


id: GO:0046103
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of inosine, hypoxanthine riboside, a nucleoside found free but not in combination in nucleic acids except in the anticodons of some tRNAs.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inosine metabolic process","termid":"GO:0046102"},{"relation_name":"is_a","term_name":"purine ribonucleoside biosynthetic process","termid":"GO:0046129"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inosine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"inosine anabolism","type":"exact"},{"name":"inosine biosynthesis","type":"exact"},{"name":"inosine formation","type":"exact"},{"name":"inosine synthesis","type":"exact"}],"termid":"GO:0046103","terms_by_termid":{"GO:0006190":null}}


id: PBO:0079669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2","termid":"PBO:0079669"}


id: PBO:0083702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER associated glutathione S-transferase; capable of homodimerization; glutathione transferase for Yvc1p vacuolar cation channel; expression induced during the diauxic shift and throughout stationary phase; functional overlap with Gtt2p, Grx1p, and Grx2p","termid":"PBO:0083702"}


id: PBO:0068944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 188, pseudogene","termid":"PBO:0068944"}


id: FYPO:0001023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cisplatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0002060","FYPO:0002057","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on cisplatin","synonyms":[{"name":"normal cell population growth in presence of cisplatin","type":"exact"},{"name":"normal cell population growth on cisplatin","type":"exact"},{"name":"normal cellular response to cisplatin","type":"related"},{"name":"normal growth on cis-DDP","type":"exact"},{"name":"normal vegetative cell population growth on cisplatin","type":"exact"}],"termid":"FYPO:0001023"}


id: GO:0015932
data:
  {"annotated_genes":["SJAG_04328","SJAG_00434","SJAG_02050","SJAG_03452","SJAG_00760","SJAG_04162","SJAG_00154","SJAG_04697","SJAG_00612","SJAG_00339","SJAG_01960","SJAG_01177","SJAG_03503","SJAG_03334","SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[101703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[59701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[58933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[103199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[70897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"},{"annotations":[74239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015230"},{"annotations":[93670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[72168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"},{"annotations":[75867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001409"},{"annotations":[76088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051724"},{"annotations":[79544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015218"},{"annotations":[75350,76342,88690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005459"},{"annotations":[76343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[77943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[77944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of nucleobases, nucleosides, nucleotides and nucleic acids from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00612":null,"SJAG_00760":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03503":null,"SJAG_04162":null,"SJAG_04325":null,"SJAG_04328":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"nucleobase-containing compound transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase, nucleoside, nucleotide and nucleic acid transmembrane transporter activity","type":"related"}],"termid":"GO:0015932","terms_by_termid":{"GO:0001409":null,"GO:0005457":null,"GO:0005458":null,"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null,"GO:0005471":null,"GO:0008521":null,"GO:0015218":null,"GO:0015228":null,"GO:0015230":null,"GO:0046964":null,"GO:0051724":null,"GO:0140987":null,"GO:1902557":null}}


id: FYPO:0001676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the nucleus is observed there during S phase of a mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to nucleus during mitotic S phase","synonyms":[{"name":"ectopic protein localization to nucleus during mitotic S phase","type":"exact"},{"name":"protein mislocalised to nucleus during S phase during vegetative growth","type":"exact"},{"name":"protein mislocalised to nucleus during mitotic S phase","type":"exact"},{"name":"protein mislocalized to nucleus during S phase during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleus during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0001676"}


id: PBO:0054661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2067","termid":"PBO:0054661"}


id: PR:Q9P6S5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ask1 gene.","definition_xrefs":["UniProtKB:Q9P6S5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit ask1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27.02c","synonyms":[{"name":"Spom972h-ask1","type":"exact"},{"name":"associated with spindles and kinetochores protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 181 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"outer kinetochore protein ask1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6S5"}


id: PBO:0084560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane-associated mitoribosome receptor; involved along with Mba1p in the cotranslational insertion of nascent polypeptide chains into the inner mitochondrial membrane; associates with the mitochondrial large ribosomal subunit and nascent polypeptide chains; null mutant displays increased tolerance to mistranslation-induced proteotoxic stress; localizes to the inner mitochondrial membrane","termid":"PBO:0084560"}


id: MONDO:0019489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diffuse palmoplantar keratoderma-acrocyanosis syndrome is characterized by the association of diffuse palmoplantar keratoderma and acrocyanosis. It has been described in eight members of one family and in two sporadic cases. The mode of inheritance in the familial cases was autosomal dominant.","definition_xrefs":["Orphanet:86918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"diffuse palmoplantar keratoderma - acrocyanosis syndrome","secondary_identifiers":["UMLS:C4303588","GARD:19089","MEDGEN:929257"],"synonyms":[{"name":"diffuse palmoplantar hyperkeratosis-acrocyanosis syndrome","type":"exact"}],"termid":"MONDO:0019489","xrefs":{"Monarch":{"xref_id":"0019489"}}}


id: PBO:0110265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear poly(A) binding protein (PABP) Pab2","termid":"PBO:0110265"}


id: GO:1903143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane, G protein-coupled signaling receptor complex which is capable of adrenomedullin receptor activity.","definition_xrefs":["GOC:TermGenie","PMID:22102369","GO_REF:0000088","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor dimeric complex","termid":"GO:0038037"},{"relation_name":"is_a","term_name":"calcitonin family receptor complex","termid":"GO:1903439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"adrenomedullin receptor complex","synonyms":[{"name":"adrenomedullin receptor AM1 complex","type":"narrow"},{"name":"adrenomedullin receptor AM2 complex","type":"narrow"}],"termid":"GO:1903143"}


id: MONDO:0002606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An angiomyolipoma composed exclusively or predominantly by polygonal epithelioid cells with eosinophilic cytoplasm, often associated with cytologic atypia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiomyolipoma","termid":"MONDO:0002603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelioid type angiomyolipoma","secondary_identifiers":["NCIT:C38151","DOID:3318","MEDGEN:1386340","UMLS:C4518194"],"termid":"MONDO:0002606","xrefs":{"Monarch":{"xref_id":"0002606"}}}


id: PBO:0051260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-67-2 (pseudogene)","termid":"PBO:0051260"}


id: PBO:0075269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 22","termid":"PBO:0075269"}


id: GO:0008080
data:
  {"annotated_genes":["SJAG_01619","SJAG_01826","SJAG_00246","SJAG_01877","SJAG_04631","SJAG_03288","SJAG_01592","SJAG_03112","SJAG_02990","SJAG_01204","SJAG_02296","SJAG_04535","SJAG_00695","SJAG_03537","SJAG_02773","SJAG_02165","SJAG_04791","SJAG_01899","SJAG_00676","SJAG_03900","SJAG_02726","SJAG_04131","SJAG_00519","SJAG_02309"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63749,70816,103367,117648],"is_not":false,"summary":null,"term":"GO:0008080"},{"annotations":[72715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990883"},{"annotations":[74782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004059"},{"annotations":[93094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046941"},{"annotations":[87730,100965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004145"},{"annotations":[71189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004343"},{"annotations":[65675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004402"},{"annotations":[74440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043998"},{"annotations":[91741,91083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[91742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[99299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[72951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[91743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"},{"annotations":[74443,99300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010485"},{"annotations":[88750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043997"},{"annotations":[88751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043995"},{"annotations":[88752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043996"},{"annotations":[88554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047198"},{"annotations":[65531,72559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004042"},{"annotations":[65528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004358"},{"annotations":[103924,115734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120518"},{"annotations":[77698,74442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990189"},{"annotations":[104334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061733"},{"annotations":[118388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004596"},{"annotations":[89721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008999"},{"annotations":[77699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990190"},{"annotations":[72718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051392"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"},{"relation_name":"is_a","term_name":"N-acyltransferase 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activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2473152","Reactome:R-HSA-6790987","Reactome:R-HSA-9636560","Reactome:R-HSA-2468039"],"termid":"GO:0008080","terms_by_termid":{"GO:0004042":null,"GO:0004059":null,"GO:0004145":null,"GO:0004343":null,"GO:0004358":null,"GO:0004402":null,"GO:0004596":null,"GO:0008080":null,"GO:0008999":null,"GO:0010485":null,"GO:0032931":null,"GO:0036408":null,"GO:0043992":null,"GO:0043993":null,"GO:0043995":null,"GO:0043996":null,"GO:0043997":null,"GO:0043998":null,"GO:0044016":null,"GO:0046941":null,"GO:0047198":null,"GO:0051392":null,"GO:0061733":null,"GO:0120518":null,"GO:1990189":null,"GO:1990190":null,"GO:1990883":null}}


id: GO:0010185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular defense response.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"regulates","term_name":"cellular defense response","termid":"GO:0006968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular defense response","synonyms":[{"name":"regulation of cellular defence response","type":"exact"}],"termid":"GO:0010185"}


id: GO:2000711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion in the centromeric region.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034096"},{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:2000709"},{"relation_name":"positively_regulates","term_name":"maintenance of meiotic sister chromatid cohesion, centromeric","termid":"GO:0035875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of maintenance of meiotic sister chromatid cohesion, centromeric","synonyms":[{"name":"positive regulation of maintenance of centromeric meiotic sister chromatin cohesion","type":"exact"},{"name":"positive regulation of maintenance of meiotic sister chromatin cohesion at centromere","type":"exact"},{"name":"positive regulation of maintenance of sister chromatin cohesion at centromere at meiosis I","type":"exact"}],"termid":"GO:2000711"}


id: PBO:0081507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 414","termid":"PBO:0081507"}


id: GO:0044855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that establishes the spatial arrangement of membrane rafts within a plasma membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane raft distribution","termid":"GO:0031580"},{"relation_name":"is_a","term_name":"plasma membrane raft localization","termid":"GO:0044856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"plasma membrane raft distribution","termid":"GO:0044855"}


id: PBO:0088927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 family, human MEMO1 ortholog, ancient conserved protein, in some organisms this domain is present with ammecr1 which interacts with mediator complex and is implicated in transcription, implicated in signalling and localization to the plasma membrane","termid":"PBO:0088927"}


id: PBO:0065728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 2A","termid":"PBO:0065728"}


id: MONDO:0007528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, autosomal dominant, type unspecified","secondary_identifiers":["MEDGEN:65083","OMIM:130090","UMLS:C0220679","MESH:C562424"],"synonyms":[{"name":"EDS, unspecified type","type":"related"},{"name":"Ehlers-Danlos syndrome, Friedman-Harrod type","type":"related"},{"name":"Ehlers-Danlos syndrome, autosomal dominant, type unspecified","type":"exact"}],"termid":"MONDO:0007528","xrefs":{"Monarch":{"xref_id":"0007528"}}}


id: GO:0005521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lamin; any of a group of intermediate-filament proteins that form the fibrous matrix on the inner surface of the nuclear envelope.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"lamin binding","synonyms":[{"name":"lamin/chromatin binding","type":"broad"}],"termid":"GO:0005521"}


id: GO:0046765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral budding that starts with formation of a membrane curvature in the host nuclear membrane.","definition_xrefs":["GOC:bf","ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding","termid":"GO:0046755"},{"relation_name":"part_of","term_name":"exit of virus from host cell nucleus by nuclear egress","termid":"GO:0046802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding from nuclear membrane","secondary_identifiers":["GO:0046749"],"synonyms":[{"name":"nuclear membrane viral budding","type":"exact"},{"name":"nuclear membrane viral budding during viral capsid envelopment","type":"related"},{"name":"viral budding from nuclear membrane by viral capsid envelopment","type":"related"},{"name":"viral budding from nuclear membrane during viral capsid envelopment","type":"related"},{"name":"virus budding from nuclear membrane","type":"exact"},{"name":"virus budding from nuclear membrane by viral capsid envelopment","type":"exact"},{"name":"virus budding from nuclear membrane during viral capsid envelopment","type":"related"}],"termid":"GO:0046765"}


id: PBO:0055613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3052","termid":"PBO:0055613"}


id: MONDO:0011935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the FSCN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 30","secondary_identifiers":["OMIM:607921","UMLS:C1842816","ICD10CM:H35.5","MEDGEN:334614","GARD:10401","DOID:0110406"],"synonyms":[{"name":"FSCN2 retinitis pigmentosa","type":"exact"},{"name":"RP 30","type":"related"},{"name":"RP30","type":"exact"},{"name":"macular Degeneration","type":"related"},{"name":"retinitis pigmentosa 30","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in FSCN2","type":"exact"},{"name":"retinitis pigmentosa type 30","type":"exact"}],"termid":"MONDO:0011935","xrefs":{"Monarch":{"xref_id":"0011935"}}}


id: PR:O42907
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC119.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C119.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.16c","synonyms":[{"name":"Spom972h-SPBC119.16c","type":"exact"}],"termid":"PR:O42907"}


id: PBO:0053770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1015","termid":"PBO:0053770"}


id: FYPO:0000888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromere outer repeat regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000877"},{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","termid":"FYPO:0000886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere otr during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 dimethylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at pericentric region during vegetative growth","type":"related"},{"name":"decreased histone H3-K9 dimethylation at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased histone H3K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000888"}


id: GO:0031703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 angiotensin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiotensin receptor binding","termid":"GO:0031701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 2 angiotensin receptor binding","synonyms":[{"name":"AT2 receptor binding","type":"exact"},{"name":"type 2 angiotensin receptor ligand","type":"narrow"}],"termid":"GO:0031703"}


id: GO:0062025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modualtes the rate, frequency or extent of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process, the chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by an SCF (Skp1/Cul1/F-box protein) complex, and mediated by the proteasome.","definition_xrefs":["PMID:28007894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032434"},{"relation_name":"regulates","term_name":"SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0031146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0062025"}


id: PBO:0091842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ClC chloride channel","termid":"PBO:0091842"}


id: FYPO:0005231
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119650],"is_not":false,"summary":null,"term":"FYPO:0005231"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering stationary phase, when cells the population are subject to glucose starvation.","definition_xrefs":["PomBase:mah","PMID:26624998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability in stationary phase","termid":"FYPO:0000245"},{"relation_name":"is_a","term_name":"loss of viability upon glucose starvation","termid":"FYPO:0004162"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability in stationary phase upon glucose starvation","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"decreased viability in stationary phase upon glucose starvation","type":"exact"},{"name":"growth defect, required for stationary phase upon glucose starvation","type":"related"},{"name":"loss of cell population viability in stationary phase upon glucose starvation","type":"exact"},{"name":"loss of viability in stationary phase during glucose starvation","type":"exact"},{"name":"reduced viability in stationary phase upon glucose starvation","type":"exact"}],"termid":"FYPO:0005231","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0005231":null}}


id: PBO:0029908
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_pravastatin","termid":"PBO:0029908"}


id: PBO:0083738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the Arp2/3 complex; Arp2/3 is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity; required for efficient Golgi-to-ER trafficking in COPI mutants","termid":"PBO:0083738"}


id: PBO:0058003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3926-2","termid":"PBO:0058003"}


id: PBO:0066055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP2C pseudogene 1","termid":"PBO:0066055"}


id: GO:0101010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reorganization or renovation of existing pulmonary blood vessels.","definition_xrefs":["GOC:mec"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel remodeling","termid":"GO:0001974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary blood vessel remodeling","synonyms":[{"name":"pulmonary blood vessel remodelling","type":"exact"}],"termid":"GO:0101010"}


id: PBO:0058864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9851","termid":"PBO:0058864"}


id: GO:0034627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD), beginning with the synthesis of tryptophan or aspartate from simpler precursors; biosynthesis may be of either the oxidized form, NAD+, or the reduced form, NADH.","definition_xrefs":["GOC:imk","PMID:17161604"],"gene_count":0,"genotype_count":0,"name":"obsolete 'de novo' NAD biosynthetic process (obsolete GO:0034627)","synonyms":[{"name":"de novo NAD biosynthetic process","type":"related"}],"termid":"GO:0034627"}


id: PBO:0079518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthetase pseudogene 2","termid":"PBO:0079518"}


id: MONDO:0015347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multicentric reticulohistiocytosis (MRH) is a rare non-Langerhans cell histiocytosis characterized by the association of specific nodular skin lesions and destructive arthritis.","definition_xrefs":["Orphanet:139436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"non-Langerhans cell histiocytosis","termid":"MONDO:0015531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"multicentric reticulohistiocytosis","secondary_identifiers":["MEDGEN:86315","icd11.foundation:977116795","UMLS:C0311284","ICD9:272.8","NCIT:C27896","GARD:7103","SCTID:84241008","DOID:11824","ICD9:713.0","MedDRA:10070595"],"synonyms":[{"name":"giant cell histiocytomatosis","type":"exact"},{"name":"lipoid dermatoarthritis","type":"exact"},{"name":"multicentric reticulohistiocytosis","type":"exact"}],"termid":"MONDO:0015347","xrefs":{"Monarch":{"xref_id":"0015347"}}}


id: MONDO:0056806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the lung. It is characterized by the presence of large malignant cells. It includes the clear cell and papillary variants of squamous cell carcinoma.","definition_xrefs":["NCIT:C133254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell lung carcinoma","termid":"MONDO:0005097"},{"relation_name":"is_a","term_name":"non-small cell lung carcinoma","termid":"MONDO:0005233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"non-small cell squamous lung carcinoma","secondary_identifiers":["DOID:0080521","UMLS:C4509816","MEDGEN:1383559","SCTID:723301009"],"synonyms":[{"name":"non-small cell squamous lung cancer","type":"exact"},{"name":"non-small cell squamous lung carcinoma","type":"exact"},{"name":"squamous non-small cell lung carcinoma","type":"exact"}],"termid":"MONDO:0056806","xrefs":{"Monarch":{"xref_id":"0056806"}}}


id: PBO:0088288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab-specific(Ryh1/Ypt6) Ric1-Rgp1 guanyl-nucleotide exchange factor subunit Ric1/Sat4","termid":"PBO:0088288"}


id: MONDO:0012465
data:
  {"annotated_genes":["SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85545],"is_not":false,"summary":null,"term":"MONDO:0012465"}]},"cv_name":"mondo","definition":"The combination of a propensity for venous thrombosis and seizures has been reported in two unrelated kindreds. Transmission is autosomal recessive. It results from a point mutation of PIGM, which reduces transcription of PIGM and blocks mannosylation of glycosylphosphatidylinositol (GPI), leading to partial but severe deficiency of GPI.","definition_xrefs":["Orphanet:83639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03115":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005570","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"hypercoagulability syndrome due to glycosylphosphatidylinositol deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:9965","NANDO:1200983","icd11.foundation:1811042875","MEDGEN:1684821","OMIM:610293","UMLS:C5201145","SCTID:724344004"],"synonyms":[{"name":"GPI deficiency","type":"related"},{"name":"GPID","type":"related"},{"name":"PIGM-CDG","type":"exact"},{"name":"congenital disorder of glycosylation due to PIGM deficiency","type":"related"},{"name":"glycosylphosphatidylinositol biosynthesis defect 1","type":"related"},{"name":"glycosylphosphatidylinositol deficiency","type":"related"}],"termid":"MONDO:0012465","terms_by_termid":{"MONDO:0012465":null},"xrefs":{"Monarch":{"xref_id":"0012465"}}}


id: PATO:0000476
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000476 bad value (obsolete PATO:0000476)","termid":"PATO:0000476"}


id: PBO:0039501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 24","termid":"PBO:0039501"}


id: MONDO:1011943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary dwarfism, non-human animal","secondary_identifiers":["OMIA:000307"],"termid":"MONDO:1011943","xrefs":{"Monarch":{"xref_id":"1011943"}}}


id: GO:0075226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The physiological, developmental and morphological changes that occur in an encysted zoospore, that germinates by developing a germ tube that may penetrate the host directly or indirectly through an appressorium. An encysted zoospore is a zoospore which has shed its flagellum and whose membrane has fused to form a walled cyst. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore germination","termid":"GO:0009847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"encysted zoospore germination","synonyms":[{"name":"encysted zoospore germination on or near host","type":"exact"}],"termid":"GO:0075226"}


id: PBO:0030359
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_hypoxia","termid":"PBO:0030359"}


id: PBO:0086269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein translocase and chaperone required for Complex III assembly; member of the AAA ATPase family; forms a homo-oligomeric complex in the mitochondrial inner membrane that translocates the C-terminal domain of Rip1p from the matrix across the inner membrane and delivers it to an assembly intermediate of respiratory Complex III; also required for assembly of the Qcr10p subunit; mutation is functionally complemented by human homolog BCS1L, linked to neonatal diseases","termid":"PBO:0086269"}


id: PBO:0058480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5587","termid":"PBO:0058480"}


id: GO:0097276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of creatinine at the level of the cell.","definition_xrefs":["GOC:yaf","PMID:12695560"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular creatinine homeostasis (obsolete GO:0097276)","termid":"GO:0097276"}


id: GO:0007155
data:
  {"annotated_genes":["SJAG_03484","SJAG_01975","SJAG_04720","SJAG_00156","SJAG_00926","SJAG_03802","SJAG_00239","SJAG_04191","SJAG_01253","SJAG_02380","SJAG_00910","SJAG_03473","SJAG_01778","SJAG_04723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70359,76922,77357,78814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000128"},{"annotations":[103895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036349"},{"annotations":[99626,98906],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0022408"},{"annotations":[103896,106613],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060257"},{"annotations":[106256,109125,109001,114469,111751,116531],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.","definition_xrefs":["GOC:pf","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00239":null,"SJAG_00910":null,"SJAG_00926":null,"SJAG_01253":null,"SJAG_01778":null,"SJAG_01975":null,"SJAG_02380":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null,"SJAG_04720":null,"SJAG_04723":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell adhesion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cell_adhesion","GO:0098602"],"synonyms":[{"name":"cell adhesion molecule activity","type":"related"},{"name":"single organism cell adhesion","type":"related"}],"termid":"GO:0007155","terms_by_termid":{"GO:0000128":null,"GO:0022408":null,"GO:0036349":null,"GO:0060257":null,"GO:1900735":null}}


id: PBO:0052426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KISS1 receptor","termid":"PBO:0052426"}


id: PBO:0111336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Utp7","termid":"PBO:0111336"}


id: MONDO:0100181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing atopic dermatitis. A genomewide linkage study revealed highly significant evidence for linkage on 3q21 (ATOD1) at marker D3S3606.","definition_xrefs":["MONDO:patterns/inherited_susceptibility","OMIM:603165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis, atopic, susceptibility to","termid":"MONDO:0100178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatitis, atopic, 1","synonyms":[{"name":"ATOD1","type":"exact"},{"name":"dermatitis, atopic, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0100181","xrefs":{"Monarch":{"xref_id":"0100181"}}}


id: PBO:0083164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified ORF RPL36B/YPL249C-A; identified by fungal homology and RT-PCR","termid":"PBO:0083164"}


id: PBO:0087150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-dependent DExD/H-box ATPase; required for activation of spliceosome before first transesterification step in RNA splicing; implicated in rearranging and proofreading snRNA structure in catalytic activation of spliceosome; ortholog of human protein DHX16","termid":"PBO:0087150"}


id: PBO:0046173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELK1 pseudogene 1","termid":"PBO:0046173"}


id: PBO:0070379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho associated coiled-coil containing protein kinase 1","termid":"PBO:0070379"}


id: PBO:0081968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RANBP2-type containing 2","termid":"PBO:0081968"}


id: GO:1901633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle membrane organization.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle membrane organization","termid":"GO:1901632"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle membrane organization","termid":"GO:0048499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle membrane organization","synonyms":[{"name":"down regulation of SLMV biogenesis","type":"narrow"},{"name":"down regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"down regulation of synaptic vesicle membrane organization","type":"exact"},{"name":"down regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"down-regulation of SLMV biogenesis","type":"narrow"},{"name":"down-regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"down-regulation of synaptic vesicle membrane organization","type":"exact"},{"name":"down-regulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"downregulation of SLMV biogenesis","type":"narrow"},{"name":"downregulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"downregulation of synaptic vesicle membrane organization","type":"exact"},{"name":"downregulation of synaptic vesicle membrane organization and biogenesis","type":"related"},{"name":"inhibition of SLMV biogenesis","type":"narrow"},{"name":"inhibition of synaptic vesicle membrane organisation","type":"narrow"},{"name":"inhibition of synaptic vesicle membrane organization","type":"narrow"},{"name":"inhibition of synaptic vesicle membrane organization and biogenesis","type":"narrow"},{"name":"negative regulation of SLMV biogenesis","type":"narrow"},{"name":"negative regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"negative regulation of synaptic vesicle membrane organization and biogenesis","type":"related"}],"termid":"GO:1901633"}


id: GO:0021547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the midbrain-hindbrain boundary. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:isa_complete","GOC:cls","GOC:jid","PMID:15541513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"},{"relation_name":"part_of","term_name":"midbrain-hindbrain boundary development","termid":"GO:0030917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary initiation","synonyms":[{"name":"MHB biosynthesis","type":"exact"},{"name":"MHB formation","type":"exact"},{"name":"isthmus biosynthesis","type":"related"},{"name":"isthmus formation","type":"related"},{"name":"midbrain-hindbrain boundary biosynthesis","type":"exact"},{"name":"midbrain-hindbrain boundary formation","type":"exact"}],"termid":"GO:0021547"}


id: MONDO:0017983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Humero-radio-ulnar synostosis is an extremely rare, genetic, congenital joint formation defect disorder characterized by uni- or bilateral fusion of the humerus, radius and ulnar bones, leading to loss of elbow motion and, in most, functional arm incapacity. It may appear as distal humeral bifurcation with absent elbow joint and shortened arm length on imaging. Hand abnormalities, namely oligoectrosyndactyly, may be associated.","definition_xrefs":["Orphanet:3266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synostosis","termid":"MONDO:0001411"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"humero-radio-ulnar synostosis","secondary_identifiers":["MEDGEN:1656946","GARD:2749","icd11.foundation:1798339866","UMLS:C4751207"],"synonyms":[{"name":"humero-radio-ulnar fusion","type":"exact"}],"termid":"MONDO:0017983","xrefs":{"Monarch":{"xref_id":"0017983"}}}


id: PBO:0059345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S11","termid":"PBO:0059345"}


id: MONDO:0014586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by autosomal recessive inheritance of postsynaptic neuromuscular junction defects, early-onset progressive muscle weakness, and kinetic abnormalities of the AChR channel that has material basis in homozygous or compound heterozygous mutation in the CHRNE gene on chromosome 17p13.","definition_xrefs":["DOID:0110677","PMID:25792100","PMID:8755487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome 4","termid":"MONDO:1040021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 4B","secondary_identifiers":["MEDGEN:904424","OMIM:616324","UMLS:C4225369","GARD:16087"],"synonyms":[{"name":"CMS4B","type":"exact"},{"name":"congenital myasthenic syndrome 4B fast-channel","type":"exact"},{"name":"congenital myasthenic syndrome type 4B","type":"exact"},{"name":"myasthenic syndrome, congenital, 4B, FAST-channel","type":"related"}],"termid":"MONDO:0014586","xrefs":{"Monarch":{"xref_id":"0014586"}}}


id: PBO:0000662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein Coq4 (predicted)","termid":"PBO:0000662"}


id: GO:0071405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methanol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to methanol","termid":"GO:0033986"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methanol","termid":"GO:0071405"}


id: MONDO:0100162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any recessive immunodeficiency (ID), with or without ectodermal dysplasia (EDA), in which the cause of the disease is mutation in the IKBKG gene. ID/EDA-ID patients, always males, are hemizygous for an IKBKG (NEMO) mutation that preserves residual NF-κB activation (hypomorphic mutations) and may also present with osteopetrosis and lymphoedema (OL-EDA-ID).","definition_xrefs":["PMID:11047757","PMID:35163099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"IKBKG-related immunodeficiency with or without ectodermal dysplasia","synonyms":[{"name":"NEMO related ID/EDA-ID","type":"exact"}],"termid":"MONDO:0100162","xrefs":{"Monarch":{"xref_id":"0100162"}}}


id: GO:0044747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming distinct miRNA isoforms from a mature miRNA that differ at their 3'-ends.","definition_xrefs":["PMID:22055292","PMID:22055293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-miRNA processing","termid":"GO:0031054"},{"relation_name":"is_a","term_name":"regulatory ncRNA 3'-end processing","termid":"GO:0043628"},{"relation_name":"part_of","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"pre-miRNA 3'-end processing","synonyms":[{"name":"mature miRNA 3'-end processing","type":"related"},{"name":"miRNA 3' end terminal trimming","type":"broad"},{"name":"miRNA 3'-end processing","type":"broad"},{"name":"miRNA trimming","type":"broad"}],"termid":"GO:0044747"}


id: PBO:0011153
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mucopolysaccharidosis","termid":"PBO:0011153"}


id: PBO:0087790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E3 ligase; catalyzes sumoylation of Yku70p/80p and Sir4p promoting telomere anchoring to the nuclear envelope and regulating telomerase activity; DNA-bound form catalyzes a DNA-damaged triggered sumoylation wave resulting in multisite modification of several DNA repair proteins, enhancing interactions between these proteins and accelerating repair; sumoylates Cse4p, a prerequisite for STUbL-mediated Ub-dependent degradation; role in telomere length maintenance","termid":"PBO:0087790"}


id: GO:0100060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any DNA binding that negatively regulates SREBP signaling pathway.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by DNA binding (obsolete GO:0100060)","termid":"GO:0100060"}


id: PBO:0075541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E21","termid":"PBO:0075541"}


id: GO:0050343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + NAD+ = trans-didehydroacyl-CoA + NADH.","definition_xrefs":["EC:1.3.1.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"trans-2-enoyl-CoA reductase (NADH) activity","secondary_identifiers":["MetaCyc:TRANS-2-ENOYL-COA-REDUCTASE-NAD+-RXN","RHEA:18177"],"synonyms":[{"name":"acyl-CoA:NAD+ trans-2-oxidoreductase activity","type":"related"}],"termid":"GO:0050343"}


id: PBO:0074664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 50D","termid":"PBO:0074664"}


id: PBO:0059928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 14","termid":"PBO:0059928"}


id: PBO:0025433
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae Spt5","termid":"PBO:0025433"}


id: PBO:0044356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 43","termid":"PBO:0044356"}


id: MONDO:0003476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma, often supratentorial in location, characterized by the presence of ependymal cells with a perinuclear halo.","definition_xrefs":["NCIT:C4714"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete benign ependymoma (obsolete MONDO:0003161)","termid":"MONDO:0003161"},{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clear cell ependymoma","secondary_identifiers":["DOID:5507","ONCOTREE:CCE","MEDGEN:1852795","UMLS:C5848299"],"synonyms":[{"name":"clear cell ependymoma","type":"exact"}],"termid":"MONDO:0003476","xrefs":{"Monarch":{"xref_id":"0003476"}}}


id: GO:0016209
data:
  {"annotated_genes":["SJAG_01199","SJAG_04823","SJAG_04632","SJAG_02630","SJAG_01292","SJAG_04788","SJAG_03623","SJAG_04953","SJAG_01734","SJAG_00141","SJAG_03166","SJAG_00489","SJAG_05181","SJAG_01162","SJAG_00668","SJAG_02515","SJAG_01216","SJAG_03303","SJAG_03653","SJAG_04125","SJAG_04399"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100342],"is_not":false,"summary":null,"term":"GO:0016209"},{"annotations":[71350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004096"},{"annotations":[98282,89729,99608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004602"},{"annotations":[79407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004362"},{"annotations":[107162,79887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004601"},{"annotations":[63759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051920"},{"annotations":[77175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032542"},{"annotations":[58103,65333,77507,74672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004784"},{"annotations":[79755,95534,76167,70693,109205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008379"},{"annotations":[73561,80023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00489":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_01734":null,"SJAG_02515":null,"SJAG_02630":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03623":null,"SJAG_03653":null,"SJAG_04125":null,"SJAG_04399":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"antioxidant activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016209","terms_by_termid":{"GO:0004096":null,"GO:0004362":null,"GO:0004601":null,"GO:0004602":null,"GO:0004784":null,"GO:0004791":null,"GO:0008379":null,"GO:0016209":null,"GO:0032542":null,"GO:0051920":null}}


id: PBO:0076218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase upregulated non-coding 1","termid":"PBO:0076218"}


id: PBO:0072020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 7","termid":"PBO:0072020"}


id: PR:O74396
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps901 gene.","definition_xrefs":["UniProtKB:O74396","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 9a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.10","synonyms":[{"name":"Spom972h-vps901","type":"exact"},{"name":"vacuolar protein-targeting protein 9a (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74396"}


id: GO:0090257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a muscle system process, a multicellular organismal process carried out by any of the organs or tissues in a muscle system.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"muscle system process","termid":"GO:0003012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle system process","termid":"GO:0090257"}


id: PBO:0069505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 772, pseudogene","termid":"PBO:0069505"}


id: PBO:0060826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nectin cell adhesion molecule 2","termid":"PBO:0060826"}


id: PBO:0043763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX11 pseudogene 1","termid":"PBO:0043763"}


id: FYPO:0005704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after exposure to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability following cellular response to hydroxyurea","synonyms":[{"name":"decreased viability following cellular response to hydroxyurea","type":"exact"},{"name":"loss of cell population viability following cellular response to hydroxyurea","type":"exact"},{"name":"loss of viability following HU exposure","type":"exact"},{"name":"loss of viability following cellular response to HU","type":"exact"},{"name":"reduced viability following cellular response to hydroxyurea","type":"related"}],"termid":"FYPO:0005704"}


id: MONDO:0032773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"uridine-cytidineuria","secondary_identifiers":["OMIM:618477","UMLS:C4760647","MEDGEN:1681582"],"synonyms":[{"name":"URCTU","type":"related"},{"name":"URIDINE-CYTIDINEURIA","type":"related"},{"name":"uridine-cytidineuria","type":"exact"}],"termid":"MONDO:0032773","xrefs":{"Monarch":{"xref_id":"0032773"}}}


id: GO:0015917
data:
  {"annotated_genes":["SJAG_00669","SJAG_04370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75120],"is_not":false,"summary":null,"term":"GO:0015917"},{"annotations":[68991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"}]},"cv_name":"biological_process","definition":"The directed movement of aminophospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Aminophospholipids contain phosphoric acid as a mono- or diester and an amino (NH2) group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00669":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"aminophospholipid transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000108":null},"termid":"GO:0015917","terms_by_termid":{"GO:0015917":null,"GO:0140331":null}}


id: FYPO:0003134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of alpha-D-glucan measured in the cell wall is greater than normal during a cellular response to calcium starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell wall alpha-glucan level","termid":"FYPO:0001084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased cell wall alpha-glucan level during cellular response to calcium starvation","synonyms":[{"name":"increased cell wall alpha-D-glucan level during cellular response to calcium starvation","type":"exact"},{"name":"increased cell wall alpha-glucan accumulation during cellular response to calcium starvation","type":"related"},{"name":"increased cell wall alpha-glucan level during cellular response to calcium starvation during mitotic cell cycle","type":"related"},{"name":"increased cell wall alpha-glucan level during cellular response to calcium starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0003134"}


id: GO:0033748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2 + A = AH2.","definition_xrefs":["EC:1.12.99.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"hydrogenase (acceptor) activity","secondary_identifiers":["MetaCyc:RXN0-4141","RHEA:12116"],"synonyms":[{"name":"H2 producing hydrogenase activity","type":"broad"},{"name":"hydrogen-lyase activity","type":"broad"},{"name":"hydrogen:(acceptor) oxidoreductase activity","type":"related"},{"name":"hydrogen:acceptor oxidoreductase activity","type":"related"},{"name":"hydrogenlyase activity","type":"broad"},{"name":"uptake hydrogenase activity","type":"broad"}],"termid":"GO:0033748"}


id: PBO:0073970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC22A18 antisense RNA","termid":"PBO:0073970"}


id: PBO:0084393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm (Like Sm) protein; forms heteroheptameric complex (with Lsm2p, Lsm3p, Lsm4p, Lsm5p, Lsm6p, and Lsm7p) that is part of spliceosomal U6 snRNP and is also implicated in processing of pre-tRNA, pre-snoRNA, and pre-rRNA","termid":"PBO:0084393"}


id: PBO:0005695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, rrm type","termid":"PBO:0005695"}


id: MONDO:0006221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic polyp that arises from the stomach. This category includes intestinal-type adenomatous polyps, gastric-type adenomas, and fundic gland polyps.","definition_xrefs":["NCIT:C7699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system adenoma","termid":"MONDO:0006180"},{"relation_name":"is_a","term_name":"stomach polyp","termid":"MONDO:0008277"},{"relation_name":"is_a","term_name":"gastric neoplasm","termid":"MONDO:0021085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric adenoma","secondary_identifiers":["EFO:1000268","MEDGEN:56204","UMLS:C0149826"],"synonyms":[{"name":"adenoma of stomach","type":"exact"},{"name":"adenoma of the stomach","type":"exact"},{"name":"gastric adenoma","type":"exact"},{"name":"stomach adenoma","type":"exact"}],"termid":"MONDO:0006221","xrefs":{"Monarch":{"xref_id":"0006221"}}}


id: MONDO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of frontal sinusitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontal sinusitis","termid":"MONDO:0001121"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute frontal sinusitis","secondary_identifiers":["DOID:14225","ICD10CM:J01.1","UMLS:C0155805","MEDGEN:510087","SCTID:91038008","icd11.foundation:86893536","ICD9:461.1"],"synonyms":[{"name":"frontal sinusitis, acute","type":"exact"}],"termid":"MONDO:0001912","xrefs":{"Monarch":{"xref_id":"0001912"}}}


id: GO:0060189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of protein desumoylation. Protein desumoylation is the process in which a SUMO protein (small ubiquitin-related modifier) is cleaved from its target protein.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein desumoylation","termid":"GO:0060188"},{"relation_name":"is_a","term_name":"positive regulation of protein modification by small protein conjugation or removal","termid":"GO:1903322"},{"relation_name":"positively_regulates","term_name":"protein desumoylation","termid":"GO:0016926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein desumoylation","termid":"GO:0060189"}


id: GO:0030619
data:
  {"annotated_genes":["SJAG_04911","SJAG_04497","SJAG_05009","SJAG_03983"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73508,76411,77153,113665],"is_not":false,"summary":null,"term":"GO:0030619"}]},"cv_name":"molecular_function","definition":"Binding to a U1 small nuclear RNA (U1 snRNA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03983":null,"SJAG_04497":null,"SJAG_04911":null,"SJAG_05009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"U1 snRNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030619","terms_by_termid":{"GO:0030619":null}}


id: PBO:0051270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 1","termid":"PBO:0051270"}


id: GO:0019741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pentacyclic triterpenoid compounds, terpenoids with six isoprene units and 5 carbon rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid catabolic process","termid":"GO:0016105"},{"relation_name":"is_a","term_name":"pentacyclic triterpenoid metabolic process","termid":"GO:0019742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"pentacyclic triterpenoid catabolic process","synonyms":[{"name":"pentacyclic triterpenoid breakdown","type":"exact"},{"name":"pentacyclic triterpenoid catabolism","type":"exact"},{"name":"pentacyclic triterpenoid degradation","type":"exact"}],"termid":"GO:0019741"}


id: GO:0019493
data:
  {"annotated_genes":["SJAG_00495","SJAG_03398"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78634,113588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine into other compounds, including proline.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine catabolic process","termid":"GO:0006527"},{"relation_name":"is_a","term_name":"proline metabolic process","termid":"GO:0006560"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_03398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"arginine catabolic process to proline","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ARG-PRO-PWY"],"synonyms":[{"name":"arginine breakdown to proline","type":"exact"},{"name":"arginine degradation to proline","type":"exact"}],"termid":"GO:0019493","terms_by_termid":{"GO:0010121":null}}


id: PBO:0001695
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein destruction box","termid":"PBO:0001695"}


id: PBO:0087877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator; involved in regulation of gluconeogenesis and fermentable carbon utilization; GFP-fusion protein localizes to cytoplasm, nucleus; null mutation affects periodicity of transcriptional and metabolic oscillation; plays role in restricting Ty1 transposition; member of the zinc cluster family of proteins, similar to Rds2p","termid":"PBO:0087877"}


id: MONDO:0019256
data:
  {"annotated_genes":["SJAG_03024","SJAG_03509","SJAG_00717","SJAG_03018","SJAG_04865","SJAG_04810","SJAG_02855","SJAG_01474"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[86390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008974"},{"annotations":[87081,87082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[86950,86949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011816"},{"annotations":[85407,85408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[86121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014793"},{"annotations":[87548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of sterol metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"steroid metabolism disease","termid":"MONDO:0045012"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_01474":null,"SJAG_02855":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03509":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"sterol metabolism disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5681277","GARD:18981","Orphanet:79226","MEDGEN:1842986"],"synonyms":[{"name":"inborn error of sterol metabolic process","type":"exact"},{"name":"inborn sterol metabolic process disorder","type":"exact"},{"name":"rare inborn error of sterol metabolic process","type":"exact"}],"termid":"MONDO:0019256","terms_by_termid":{"MONDO:0008974":null,"MONDO:0009849":null,"MONDO:0010035":null,"MONDO:0010621":null,"MONDO:0011816":null,"MONDO:0012481":null,"MONDO:0014793":null},"xrefs":{"Monarch":{"xref_id":"0019256"}}}


id: PBO:0039201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B1 pseudogene 4","termid":"PBO:0039201"}


id: PBO:0041548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 open reading frame 32","termid":"PBO:0041548"}


id: PBO:0063822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PH domain and leucine rich repeat protein phosphatase 1","termid":"PBO:0063822"}


id: MONDO:0007018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the vulva. It is characterized by pruritus and painful urination.","definition_xrefs":["MESH:D014847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar disease","termid":"MONDO:0002187"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvitis","secondary_identifiers":["SCTID:63144007","UMLS:C0042996","icd11.foundation:727252860","DOID:3901","MedDRA:10047780","MEDGEN:22690","EFO:1001239"],"synonyms":[{"name":"inflammation of mammalian vulva","type":"exact"},{"name":"mammalian vulva inflammation","type":"exact"}],"termid":"MONDO:0007018","xrefs":{"Monarch":{"xref_id":"0007018"}}}


id: GO:0030505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of inorganic diphosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"inorganic diphosphate transport","synonyms":[{"name":"inorganic pyrophosphate transport","type":"exact"}],"termid":"GO:0030505"}


id: PBO:0042274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 8","termid":"PBO:0042274"}


id: PATO:0002220
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a protein or a molecule by virtue of the bearer's having a phosphate (PO4) group.","definition_xrefs":["wikipedia:en.wikipedia.org/wiki/Phosphorylated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"PATO:0002262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylated","termid":"PATO:0002220"}


id: GO:0052808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADP+ + 1,5-dihydrocoenzyme F420 = NADPH + H+ + coenzyme F420. 1,5-dihydrocoenzyme F420 is also known as reduced coenzyme F420.","definition_xrefs":["PMID:11726492","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete reduced coenzyme F420:NADP+ oxidoreductase activity (obsolete GO:0052808)","synonyms":[{"name":"F420H2:NADP oxidoreductase activity","type":"exact"},{"name":"F420H2:NADP+ oxidoreductase activity","type":"exact"},{"name":"NADP+:F420 oxidoreductase activity","type":"exact"},{"name":"coenzyme F420-dependent NADP oxidoreductase activity","type":"exact"},{"name":"coenzyme F420-dependent NADP reductase activity","type":"exact"}],"termid":"GO:0052808"}


id: PBO:0055392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2822","termid":"PBO:0055392"}


id: MONDO:0019455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute myeloid leukemia characterized by bone marrow fibrosis without preexisting primary myelofibrosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia by FAB classification","termid":"MONDO:0015667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute panmyelosis with myelofibrosis","secondary_identifiers":["MedDRA:10000879","NCIT:C4344","icd11.foundation:1831346835","ICD9:289.89","SCTID:109991003","UMLS:C0334674","Orphanet:86843","GARD:11907","icd11.foundation:585339631","ICDO:9931/3","MEDGEN:87279","ONCOTREE:APMF"],"synonyms":[{"name":"APMF","type":"exact"},{"name":"acute (malignant) myelofibrosis","type":"exact"},{"name":"acute (malignant) myelosclerosis","type":"exact"},{"name":"acute myelodysplasia with myelofibrosis","type":"exact"},{"name":"acute myelofibrosis","type":"exact"},{"name":"acute myelosclerosis","type":"exact"},{"name":"acute panmyelosis","type":"exact"}],"termid":"MONDO:0019455","xrefs":{"Monarch":{"xref_id":"0019455"}}}


id: PBO:0083267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 85% of ORF overlaps the uncharacterized gene CUE5; deletion in cyr1 mutant results in loss of stress resistance","termid":"PBO:0083267"}


id: PBO:0005525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Prp45","termid":"PBO:0005525"}


id: GO:0047601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetate + diphosphate = acetyl phosphate + phosphate.","definition_xrefs":["EC:2.7.2.12","RHEA:24276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"acetate kinase (diphosphate) activity","secondary_identifiers":["MetaCyc:ACETATE-KINASE-PYROPHOSPHATE-RXN","KEGG_REACTION:R00320"],"synonyms":[{"name":"acetate kinase (pyrophosphate) activity","type":"related"},{"name":"diphosphate:acetate phosphotransferase activity","type":"related"},{"name":"pyrophosphate-acetate phosphotransferase activity","type":"related"}],"termid":"GO:0047601"}


id: MONDO:0850092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-cardiac arrest syndrome","secondary_identifiers":["UMLS:C4285706","MEDGEN:1672555","DOID:0070306"],"termid":"MONDO:0850092","xrefs":{"Monarch":{"xref_id":"0850092"}}}


id: MONDO:0010556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of chondrodysplasia punctata.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"non-rhizomelic chondrodysplasia punctata","termid":"MONDO:0015775"},{"relation_name":"is_a","term_name":"sterol biosynthesis disorder","termid":"MONDO:0019240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"X-linked chondrodysplasia punctata","secondary_identifiers":["DOID:0060292","MEDGEN:538019","UMLS:C0263627"],"synonyms":[{"name":"CPXD","type":"exact"},{"name":"X-linked dominant chondrodysplasia punctata","type":"related"},{"name":"chondrodysplasia punctata, X-linked","type":"exact"},{"name":"chondrodysplasia punctata, X-linked dominant","type":"related"},{"name":"chondrodystrophia calcificans congenita","type":"exact"}],"termid":"MONDO:0010556","xrefs":{"Monarch":{"xref_id":"0010556"}}}


id: PBO:0077786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase II beta","termid":"PBO:0077786"}


id: PBO:0038797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 3A (pseudogene)","termid":"PBO:0038797"}


id: PBO:0071392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 15","termid":"PBO:0071392"}


id: PBO:0079292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 10","termid":"PBO:0079292"}


id: MONDO:0022891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis Maroteaux Fonfria type","secondary_identifiers":["GARD:1598"],"termid":"MONDO:0022891","xrefs":{"Monarch":{"xref_id":"0022891"}}}


id: MONDO:0010238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any X-linked nonsyndromic deafness in which the cause of the disease is a mutation in the SMPX gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked nonsyndromic hearing loss","termid":"MONDO:0019586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, X-linked 4","secondary_identifiers":["OMIM:300066","DOID:0111735","UMLS:C1848204","MESH:C564723","GARD:18096","MEDGEN:376307"],"synonyms":[{"name":"DFNX4","type":"related"},{"name":"SMPX X-linked nonsyndromic deafness","type":"narrow"},{"name":"X-linked nonsyndromic deafness caused by mutation in SMPX","type":"narrow"},{"name":"deafness, X-linked 4","type":"narrow"},{"name":"deafness, X-linked 4, X-linked dominant","type":"narrow"},{"name":"deafness, X-linked 6, progressive","type":"related"},{"name":"deafness, X-linked type 4","type":"narrow"},{"name":"deafness, nonsyndromic sensorineural progressive 6","type":"narrow"}],"termid":"MONDO:0010238","xrefs":{"Monarch":{"xref_id":"0010238"}}}


id: PBO:0075229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 4","termid":"PBO:0075229"}


id: PBO:0057318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 518e","termid":"PBO:0057318"}


id: GO:0021525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which differentiating motor neurons in the neural tube acquire the specialized structural and/or functional features of lateral motor column neurons. Lateral motor column neurons are generated only on limb levels and send axons into the limb mesenchyme. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:jid","PMID:11262869","GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord motor neuron differentiation","termid":"GO:0021522"},{"relation_name":"part_of","term_name":"somatic motor neuron differentiation","termid":"GO:0021523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral motor column neuron differentiation","termid":"GO:0021525"}


id: PBO:0051803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif and Sec7 domain ArfGEF 2","termid":"PBO:0051803"}


id: FYPO:0003399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 27S ribosomal RNA precursor measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal rRNA or precursor level","termid":"FYPO:0006000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal 27S rRNA precursor level","synonyms":[{"name":"normal 27S rRNA precursor accumulation","type":"related"},{"name":"normal 27S rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"normal 27S rRNA precursor level during vegetative growth","type":"exact"},{"name":"normal 27S rRNA precursor transcript level","type":"exact"}],"termid":"FYPO:0003399"}


id: MONDO:0007267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the TPM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 3","secondary_identifiers":["MEDGEN:349382","MESH:C566170","DOID:0110309","OMIM:115196","UMLS:C1861863"],"synonyms":[{"name":"CMH3","type":"exact"},{"name":"TPM1 hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 3","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 3","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 3","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 3","type":"exact"},{"name":"hypertrophic cardiomyopathy 3","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in TPM1","type":"exact"},{"name":"hypertrophic cardiomyopathy type 3","type":"exact"}],"termid":"MONDO:0007267","xrefs":{"Monarch":{"xref_id":"0007267"}}}


id: PBO:0079717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component n-recognin 4","termid":"PBO:0079717"}


id: GO:0061503
data:
  {"annotated_genes":["SJAG_02084"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80677],"is_not":false,"summary":null,"term":"GO:0061503"}]},"cv_name":"molecular_function","definition":"Catalysis of the ATP-dependent dehydration of t6A to form cyclic t6A.","definition_xrefs":["GOC:dph","PMID:23242255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02084":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140098","GO:0140101","GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0061503","terms_by_termid":{"GO:0061503":null}}


id: MONDO:0030462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 40","secondary_identifiers":["MEDGEN:1794217","UMLS:C5562007","OMIM:619582"],"synonyms":[{"name":"JBTS40","type":"exact"}],"termid":"MONDO:0030462","xrefs":{"Monarch":{"xref_id":"0030462"}}}


id: PR:Q9UTI5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01555","PANTHER:PTHR11124:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.06","secondary_identifiers":["UniProtKB:Q9UTI5"],"synonyms":[{"name":"Spom972h-VPS29","type":"exact"}],"termid":"PR:Q9UTI5"}


id: PBO:0001198
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.1.4","termid":"PBO:0001198"}


id: PBO:0062964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 7","termid":"PBO:0062964"}


id: GO:0015693
data:
  {"annotated_genes":["SJAG_04111","SJAG_00211","SJAG_02484","SJAG_03516","SJAG_01639","SJAG_02578"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990616"},{"annotations":[62622,57475,117365,56949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903830"},{"annotations":[77667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045016"}]},"cv_name":"biological_process","definition":"The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00211":null,"SJAG_01639":null,"SJAG_02484":null,"SJAG_02578":null,"SJAG_03516":null,"SJAG_04111":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"magnesium ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"magnesium transport","type":"related"}],"termid":"GO:0015693","terms_by_termid":{"GO:0045016":null,"GO:1903830":null,"GO:1990616":null}}


id: GO:0031090
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id: GO:0097466
data:
  {"annotated_genes":["SJAG_03032","SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93875,96041],"is_not":false,"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"An ERAD pathway whereby endoplasmic reticulum (ER)-resident glycoproteins are targeted for degradation. Includes differential processing of the glycoprotein sugar chains, retrotranslocation to the cytosol and degradation by the ubiquitin-proteasome pathway. A glycoprotein is a compound in which a carbohydrate component is covalently bound to a protein component.","definition_xrefs":["PMID:16079177","GOC:al","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein catabolic process","termid":"GO:0006516"},{"relation_name":"is_a","term_name":"ERAD pathway","termid":"GO:0036503"},{"relation_name":"is_a","term_name":"response to glycoprotein","termid":"GO:1904587"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"ubiquitin-dependent glycoprotein ERAD pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-associated glycoprotein degradation","type":"exact"},{"name":"glycoprotein ERAD","type":"exact"},{"name":"gpERAD","type":"exact"},{"name":"misfolded or incompletely synthesized glycoprotein catabolic process","type":"broad"}],"termid":"GO:0097466","terms_by_termid":{"GO:0097466":null}}


id: PBO:0082537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; has similarity to Tir1p, Tir2p, Tir3p, and Tir4p; member of the seripauperin multigene family encoded mainly in subtelomeric regions; expressed under anaerobic conditions, completely repressed during aerobic growth","termid":"PBO:0082537"}


id: MONDO:0010101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Teebi-Shaltout syndrome is a rare, genetic, development defect during embryogenesis malformation syndrome characterized by association of characteristic facial features (including abnormal head shape with narrow forehead, hypertelorism, telecanthus, small earlobes, broad nasal bridge and tip, underdeveloped ala nasi, small/wide mouth and high/cleft palate), ectodermal dysplasia (including oligodontia with delayed dentition, slow growing hair and reduced sweating) and skeletal abnormalities including camptodactyly and caudal appendage. Short stature and abnormal palmar creases are additional clinical features.","definition_xrefs":["Orphanet:3291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Teebi-Shaltout syndrome","secondary_identifiers":["GARD:5125","UMLS:C1848912","OMIM:272950","MESH:C536950","MEDGEN:376472"],"synonyms":[{"name":"TBSH","type":"related"},{"name":"Teebi Shaltout syndrome","type":"related"},{"name":"Teebi-Shaltout syndrome","type":"exact"},{"name":"craniofacial anomalies, abnormal hair, camptodactyly, and caudal appendage","type":"related"}],"termid":"MONDO:0010101","xrefs":{"Monarch":{"xref_id":"0010101"}}}


id: GO:0033240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"positively_regulates","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amine metabolic process","synonyms":[{"name":"positive regulation of amine metabolism","type":"exact"},{"name":"positive regulation of cellular amine metabolic process","type":"exact"}],"termid":"GO:0033240"}


id: GO:0120166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of producing fruiting body precursors, called protoperithecia. Protoperitheicium is a spherical structure that is formed in the sexual phase of ascomycetous fungi such as Neurospora crassa and Sordaria macrospora. Protoperithecium is formed by the enveloping of ascogonia cells by sterile hyphae and it develops into perithecium.","definition_xrefs":["PMID:20739093","PMID:25311923","PMID:6235212","PMID:4410944","DOI:10.1007/978-3-642-00286-1_2","PMID:6235211","PMID:125266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protoperithecium formation","termid":"GO:0120166"}


id: GO:0005034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Sensing extracellular osmolarity to initiate a change in cell activity, and spanning the membrane of the cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0038023","GO:0003674","GO:0098772","GO:0140299"],"is_obsolete":false,"name":"osmosensor activity","termid":"GO:0005034"}


id: FYPO:0009078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing ethanol as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002057","FYPO:0001985","FYPO:0000139","FYPO:0002058","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"decreased cell population growth on ethanol carbon source","synonyms":[{"name":"decreased growth on ethanol carbon source","type":"broad"},{"name":"decreased vegetative cell growth on ethanol carbon source","type":"exact"},{"name":"reduced cell growth on ethanol carbon source","type":"related"},{"name":"slow cell growth on ethanol carbon source","type":"narrow"}],"termid":"FYPO:0009078"}


id: PBO:0083184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the Ty1 long terminal repeat, YPRWdelta12","termid":"PBO:0083184"}


id: MONDO:0002640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign and malignant neoplasms which arise from or metastasize to the optic or second cranial nerve which extends from the optic disk of the eye and joins the optic chiasm. Clinical features may include visual loss, proptosis, and local pain. The majority of optic nerve tumors or optic gliomas.","definition_xrefs":["NCIT:C4801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic nerve disorder","termid":"MONDO:0002135"},{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"},{"relation_name":"is_a","term_name":"central nervous system neoplasm","termid":"MONDO:0006130"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optic nerve neoplasm","secondary_identifiers":["MESH:D019574","UMLS:C0524802","DOID:3419","EFO:1001073","SCTID:395505000","ICD9:239.7","MEDGEN:101181"],"synonyms":[{"name":"cranial nerve II neoplasm","type":"exact"},{"name":"cranial nerve II neoplasm (disease)","type":"exact"},{"name":"cranial nerve II neoplasms","type":"exact"},{"name":"cranial nerve II tumor","type":"exact"},{"name":"cranial nerve II tumour","type":"exact"},{"name":"neoplasm of cranial nerve II","type":"exact"},{"name":"neoplasm of optic nerve","type":"exact"},{"name":"neoplasm of second cranial nerve","type":"exact"},{"name":"neoplasm of the optic nerve","type":"exact"},{"name":"neoplasm of the second cranial nerve","type":"exact"},{"name":"neoplasms, optic nerve","type":"exact"},{"name":"neoplasms, second cranial nerve","type":"exact"},{"name":"optic nerve neoplasm","type":"exact"},{"name":"optic nerve neoplasms","type":"exact"},{"name":"optic nerve tumor","type":"exact"},{"name":"optic nerve tumour","type":"exact"},{"name":"second cranial nerve neoplasm","type":"exact"},{"name":"second cranial nerve neoplasms","type":"exact"},{"name":"second cranial nerve tumor","type":"exact"},{"name":"second cranial nerve tumour","type":"exact"},{"name":"tumor of cranial nerve II","type":"exact"},{"name":"tumor of optic nerve","type":"exact"},{"name":"tumor of second cranial nerve","type":"exact"},{"name":"tumor of the optic nerve","type":"exact"},{"name":"tumor of the second cranial nerve","type":"exact"},{"name":"tumour of cranial nerve II","type":"exact"},{"name":"tumour of optic nerve","type":"exact"},{"name":"tumour of second cranial nerve","type":"exact"},{"name":"tumour of the optic nerve","type":"exact"},{"name":"tumour of the second cranial nerve","type":"exact"}],"termid":"MONDO:0002640","xrefs":{"Monarch":{"xref_id":"0002640"}}}


id: MONDO:0006815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the jejunum.","direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine cancer","termid":"MONDO:0000956"},{"relation_name":"is_a","term_name":"jejunal neoplasm","termid":"MONDO:0002564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"jejunal cancer","secondary_identifiers":["DOID:13499","UMLS:C0153427","MEDGEN:56302","NCIT:C170919","ICD9:152.1","MedDRA:10023166","EFO:1000998","SCTID:363404008"],"synonyms":[{"name":"cancer of jejunum","type":"exact"},{"name":"jejunum cancer","type":"exact"},{"name":"malignant jejunum neoplasm","type":"exact"},{"name":"malignant neoplasm of jejunum","type":"exact"},{"name":"malignant tumor of jejunum","type":"exact"},{"name":"malignant tumour of jejunum","type":"exact"}],"termid":"MONDO:0006815","xrefs":{"Monarch":{"xref_id":"0006815"}}}


id: PBO:0083137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual-specificity ser/thr and tyrosine protein kinase; roles in chromosome segregation, meiotic entry, genome stability, phosphorylation-dependent protein degradation (Rcn1p and Cdc6p), inhibition of protein kinase A, transcriptional regulation, inhibition of RNA pol III, calcium stress and inhibition of Clb2p-Cdc28p after nuclear division; MCK1 has a paralog, YGK3, that arose from the whole genome duplication","termid":"PBO:0083137"}


id: GO:0005721
data:
  {"annotated_genes":["SJAG_03945","SJAG_04030","SJAG_03664","SJAG_05329","SJAG_04039","SJAG_01332","SJAG_03789","SJAG_03356","SJAG_04186","SJAG_00335","SJAG_03997","SJAG_04253","SJAG_01067","SJAG_00414","SJAG_02621","SJAG_04670","SJAG_01873","SJAG_02409","SJAG_04141","SJAG_02866","SJAG_03418","SJAG_03350","SJAG_03042","SJAG_02927","SJAG_03982","SJAG_01745","SJAG_05372","SJAG_04508","SJAG_00302","SJAG_02725","SJAG_02119","SJAG_02773","SJAG_04623","SJAG_02846","SJAG_02401","SJAG_01075","SJAG_03635","SJAG_03689","SJAG_03942","SJAG_01540","SJAG_00934","SJAG_03680","SJAG_03916","SJAG_00756","SJAG_02778","SJAG_00678","SJAG_03193","SJAG_03989","SJAG_02990","SJAG_01601","SJAG_01046","SJAG_03543","SJAG_01579","SJAG_03926","SJAG_04574","SJAG_04412","SJAG_03844"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87962,88185,89683,90371,91247,91595,91666,91734,92116,92396,92705,94157,94405,94421,96490,97056,99292,99447,99894,99941,102175,103118,103563,104429,104526,106663,106906,107690,108181,108522,110854,111584,112481,112586,112989,112990,112991,113435,113609,113671,114052,114367,114666,114805,114951,115810,116369,117249,117513,118086,118097,118144,118375,118490,118956,119092,119214],"is_not":false,"summary":null,"term":"GO:0005721"}]},"cv_name":"cellular_component","definition":"Heterochromatin that is located adjacent to the CENP-A rich centromere 'central core' and characterized by methylated H3 histone at lysine 9 (H3K9me2/H3K9me3).","definition_xrefs":["PMID:12019236","PMID:9413993","PMID:21437270","PMID:22729156","PMID:20206496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"},{"relation_name":"part_of","term_name":"chromosome, centromeric region","termid":"GO:0000775"}],"gene_count":57,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_00414":null,"SJAG_00678":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_01046":null,"SJAG_01067":null,"SJAG_01075":null,"SJAG_01332":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_01745":null,"SJAG_01873":null,"SJAG_02119":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02621":null,"SJAG_02725":null,"SJAG_02773":null,"SJAG_02778":null,"SJAG_02846":null,"SJAG_02866":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03042":null,"SJAG_03193":null,"SJAG_03350":null,"SJAG_03356":null,"SJAG_03418":null,"SJAG_03543":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03680":null,"SJAG_03689":null,"SJAG_03789":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03926":null,"SJAG_03942":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03989":null,"SJAG_03997":null,"SJAG_04030":null,"SJAG_04039":null,"SJAG_04141":null,"SJAG_04186":null,"SJAG_04253":null,"SJAG_04412":null,"SJAG_04508":null,"SJAG_04574":null,"SJAG_04623":null,"SJAG_04670":null,"SJAG_05329":null,"SJAG_05372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"pericentric heterochromatin","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0002137","GO:0031618","GO:0034507","GO:0062199"],"synonyms":[{"name":"centric heterochromatin","type":"exact"},{"name":"centromeric heterochromatin","type":"exact"},{"name":"chromosome, centric outer repeat region","type":"related"},{"name":"chromosome, centromeric inner repeat region","type":"related"},{"name":"chromosome, centromeric outer repeat region","type":"related"},{"name":"nuclear centric heterochromatin","type":"narrow"},{"name":"nuclear cluster","type":"narrow"},{"name":"nuclear pericentric heterochromatin","type":"narrow"}],"termid":"GO:0005721","terms_by_termid":{"GO:0005721":null}}


id: MONDO:0100157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disorder characterized by onset of megaloblastic anemia associated with decreased serum vitamin B12 (cobalamin, Cbl) in infancy or early childhood. Low molecular weight (LMW) proteinuria is frequently present, but usually occurs later and is usually mild or subclinical. Patients often present with vague symptoms, including failure to thrive, loss of appetite, fatigue, lethargy, and/or recurrent infections. Treatment with vitamin B12 results in sustained clinical improvement of the anemia. The proteinuria is nonprogressive, and affected individuals do not have deterioration of kidney function; correct diagnosis is important to prevent unnecessary treatment. The disorder results from a combination of vitamin B12 deficiency due to selective malabsorption of the vitamin, and impaired reabsorption of LMW proteins in the proximal renal tubule. These defects are caused by disruption of the AMN/CUBN complex that forms the 'cubam' receptor responsible for intestinal uptake of B12/GIF (CBLIF).","definition_xrefs":["OMIM:618882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Imerslund-Grasbeck syndrome","termid":"MONDO:0009853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Imerslund-Grasbeck syndrome type 2","secondary_identifiers":["MEDGEN:865385","UMLS:C4016948"],"synonyms":[{"name":"Imerslund-Grasbeck syndrome 2","type":"exact"},{"name":"megaloblastic anemia, Norwegian type","type":"exact"}],"termid":"MONDO:0100157","xrefs":{"Monarch":{"xref_id":"0100157"}}}


id: FYPO:0007689
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cells can grow in a normally (i.e. as in wild type) polarized manner as in the presence of a polarity landmark. The landmark itself may be in a normal or abnormal location.","definition_xrefs":["PMID:21148300","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cell growth polarization","synonyms":[{"name":"normal cell growth polarisation","type":"exact"},{"name":"normal cell growth polarization during mitotic cell cycle","type":"related"},{"name":"normal cell growth polarization during vegetative growth","type":"exact"},{"name":"normal vegetative cell growth polarization","type":"exact"}],"termid":"FYPO:0007689"}


id: PBO:0066449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 1, pseudogene","termid":"PBO:0066449"}


id: GO:0036415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the propensity of transfer RNA (tRNA) molecules to degradation. Includes processes that both stabilize and destabilize tRNAs.","definition_xrefs":["GOC:aa","PMID:21502523","PMID:23572593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA stability","termid":"GO:0043487"},{"relation_name":"is_a","term_name":"regulation of tRNA catabolic process","termid":"GO:1902370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"regulation of tRNA stability","termid":"GO:0036415"}


id: GO:0051281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the release into the cytosolic compartment of calcium ions sequestered in the endoplasmic reticulum or mitochondria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"positively_regulates","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of release of sequestered calcium ion into cytosol","synonyms":[{"name":"activation of release of sequestered calcium ion into cytosol","type":"narrow"},{"name":"positive regulation of calcium ion (Ca2+) mobilization","type":"broad"},{"name":"positive regulation of calcium mobilization","type":"broad"},{"name":"positive regulation of cytoplasmic release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of cytoplasmic release of stored calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of cytosolic release of sequestered calcium ion (Ca2+)","type":"exact"},{"name":"positive regulation of cytosolic release of stored calcium ion (Ca2+)","type":"exact"},{"name":"positive regulation of release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of release of sequestered calcium ion into cytoplasm","type":"broad"},{"name":"positive regulation of release of stored calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of release of stored calcium ion (Ca2+) into cytoplasm","type":"broad"},{"name":"positive regulation of release of stored calcium ion (Ca2+) into cytosol","type":"exact"},{"name":"stimulation of release of sequestered calcium ion into cytosol","type":"narrow"},{"name":"up regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"up-regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"upregulation of release of sequestered calcium ion into cytosol","type":"exact"}],"termid":"GO:0051281"}


id: PBO:0027537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_histidine_or_lysine","termid":"PBO:0027537"}


id: PBO:0027748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_translation_gene_mRNA_during_nitrogen_starvation","termid":"PBO:0027748"}


id: GO:0035363
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear body associated with the histone gene locus that is thought to contain all of the factors necessary for histone mRNA transcription and pre-mRNA processing. In Drosophila, U7 snRNP is located in the histone locus body rather than the distinct Cajal body.","definition_xrefs":["PMID:16533947","GOC:sart","PMID:19620235","PMID:18927579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ribonucleoprotein granule","termid":"GO:0140168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"histone locus body","synonyms":[{"name":"HLB","type":"exact"}],"termid":"GO:0035363"}


id: FYPO:0001028
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in any part of interphase, under conditions where arrest is not a normal occurrence.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic interphase","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal mitotic cell cycle arrest in interphase","type":"exact"},{"name":"abnormal mitotic interphase cell cycle arrest","type":"exact"}],"termid":"FYPO:0001028","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: GO:0036377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of mutualism between a fungus and the roots of a vascular plant, where hyphae of the fungus penetrate the plant cell wall and invaginate its cell membrane. Once inside, the fungus forms highly branched structures for nutrient exchange with the plant called arbuscules. Aids in the acquisition by the plant of nutrients such as phosphorus from the soil.","definition_xrefs":["GOC:sk","Wikipedia:Arbuscular_mycorrhiza"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in symbiotic interaction","termid":"GO:0044403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"arbuscular mycorrhizal association","synonyms":[{"name":"arbuscular mycorrhizae formation","type":"exact"},{"name":"arbuscular mycorrhizal symbiosis","type":"related"},{"name":"arbuscular mycorrhizas formation","type":"exact"}],"termid":"GO:0036377"}


id: MONDO:1010799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutis laxa that occurs in sika deer.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutis laxa, non-human animal","termid":"MONDO:1010155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cutis laxa, sika deer","secondary_identifiers":["OMIA:002404-9863"],"termid":"MONDO:1010799","xrefs":{"Monarch":{"xref_id":"1010799"}}}


id: PBO:0029756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_modification","termid":"PBO:0029756"}


id: PBO:0042260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 4 pseudogene 2","termid":"PBO:0042260"}


id: GO:0033541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway by which fatty acids having cis-double bonds on odd-numbered carbons are degraded. In this pathway, a cis-3-enoyl-CoA is generated by the core beta-oxidation pathway, and then converted to a trans-2-enoyl-CoA, which can return to the core beta-oxidation pathway for complete degradation. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["MetaCyc:PWY-5137","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation","termid":"GO:0006635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"fatty acid beta-oxidation, unsaturated, odd number","termid":"GO:0033541"}


id: PBO:0077384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 125","termid":"PBO:0077384"}


id: GO:0010225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-C radiation stimulus. UV-C radiation (UV-C light) spans the wavelengths 100 to 280 nm.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV","termid":"GO:0009411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to UV-C","synonyms":[{"name":"response to UV-C light stimulus","type":"exact"},{"name":"response to UV-C radiation stimulus","type":"exact"},{"name":"response to UVC light stimulus","type":"exact"},{"name":"response to UVC radiation stimulus","type":"exact"},{"name":"response to germicidal ultraviolet light stimulus","type":"exact"},{"name":"response to germicidal ultraviolet radiation stimulus","type":"exact"},{"name":"response to shortwave ultraviolet light stimulus","type":"exact"},{"name":"response to shortwave ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:0010225"}


id: PBO:0063792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 20 like 1","termid":"PBO:0063792"}


id: PBO:0054132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1498","termid":"PBO:0054132"}


id: PBO:0113751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain superfamily protein, potential role in central carbon metabolism based on C. neoformans metabolic data, see PF11160","termid":"PBO:0113751"}


id: PBO:0027140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_menadione","termid":"PBO:0027140"}


id: GO:0102124
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A12 + O2 + H+ + NAD(P)H = 16alpha, 17-epoxy gibberellin A12 + H2O + NAD(P).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A12 16alpha,17 epoxidase activity (obsolete GO:0102124)","termid":"GO:0102124"}


id: GO:0042837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-glucarate, the D-enantiomer of glucarate.","definition_xrefs":["GOC:jsg","ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"},{"relation_name":"is_a","term_name":"glucarate biosynthetic process","termid":"GO:0019393"},{"relation_name":"is_a","term_name":"D-glucarate metabolic process","termid":"GO:0042836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"D-glucarate biosynthetic process","synonyms":[{"name":"D-glucarate anabolism","type":"exact"},{"name":"D-glucarate biosynthesis","type":"exact"},{"name":"D-glucarate formation","type":"exact"},{"name":"D-glucarate synthesis","type":"exact"},{"name":"saccharate biosynthesis","type":"exact"},{"name":"saccharate biosynthetic process","type":"exact"}],"termid":"GO:0042837"}


id: MONDO:0015052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Primary interstitial lung disease specific to childhood due to pulmonary surfactant protein anomalies is a group of interstitial lung diseases (ILD) induced by genetic mutations disrupting surfactant function and gas exchange in the lung. The disorders caused by these mutations affect full-term infants and older children and exhibit considerable overlap in their clinical and histologic presentation.","definition_xrefs":["Orphanet:100049"],"gene_count":0,"genotype_count":0,"name":"obsolete primary interstitial lung disease specific to childhood due to pulmonary surfactant protein anomalies (obsolete MONDO:0015052)","synonyms":[{"name":"primary ILD specific to childhood due to pulmonary surfactant protein anomalies","type":"exact"}],"termid":"MONDO:0015052","xrefs":{"Monarch":{"xref_id":"0015052"}}}


id: GO:0106216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vesicle fusion with Golgi apparatus.","definition_xrefs":["PMID:26195667","GOC:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106214"},{"relation_name":"positively_regulates","term_name":"vesicle fusion with Golgi apparatus","termid":"GO:0048280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"positive regulation of vesicle fusion with Golgi apparatus","termid":"GO:0106216"}


id: PBO:0069094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 341, pseudogene","termid":"PBO:0069094"}


id: FYPO:0005694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules occurs to a lower extent than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased microtubule nucleation during vegetative growth","termid":"FYPO:0006335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000054","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased interphase microtubule nucleation","synonyms":[{"name":"decreased cytoplasmic microtubule nucleation during mitotic interphase","type":"exact"},{"name":"decreased interphase cytoplasmic microtubule nucleation","type":"exact"},{"name":"decreased interphase microtubule nucleation during vegetative growth","type":"exact"},{"name":"decreased microtubule nucleation during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased microtubule nucleation during mitotic interphase","type":"exact"},{"name":"reduced interphase microtubule nucleation","type":"exact"}],"termid":"FYPO:0005694"}


id: GO:0030812
data:
  {"annotated_genes":["SJAG_05314","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73415,76373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of nucleotide catabolic process","termid":"GO:0030811"},{"relation_name":"is_a","term_name":"negative regulation of nucleotide metabolic process","termid":"GO:0045980"},{"relation_name":"negatively_regulates","term_name":"nucleotide catabolic process","termid":"GO:0009166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nucleotide catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of nucleotide catabolic process","type":"exact"},{"name":"down-regulation of nucleotide catabolic process","type":"exact"},{"name":"downregulation of nucleotide catabolic process","type":"exact"},{"name":"inhibition of nucleotide catabolic process","type":"narrow"},{"name":"negative regulation of nucleotide breakdown","type":"exact"},{"name":"negative regulation of nucleotide catabolism","type":"exact"},{"name":"negative regulation of nucleotide degradation","type":"exact"}],"termid":"GO:0030812","terms_by_termid":{"GO:0045820":null}}


id: PBO:0081250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 22","termid":"PBO:0081250"}


id: MONDO:0011067
data:
  {"annotated_genes":["SJAG_01400"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87654],"is_not":false,"summary":null,"term":"MONDO:0011067"}]},"cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that is characterized by prelingual onset with severe to profound, stable hearing loss and has material basis in mutation in the CDH23 gene on chromosome 10q22.","definition_xrefs":["DOID:0110467","PMID:11090341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C563327","MEDGEN:330455","GARD:22590","OMIM:601386","UMLS:C1832394"],"synonyms":[{"name":"DFNB12","type":"narrow"},{"name":"autosomal recessive deafness 12","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 12","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 12","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 12","type":"exact"},{"name":"deafness, autosomal recessive 12","type":"narrow"},{"name":"deafness, autosomal recessive 12, modifier of","type":"narrow"},{"name":"deafness, autosomal recessive type 12","type":"narrow"}],"termid":"MONDO:0011067","terms_by_termid":{"MONDO:0011067":null},"xrefs":{"Monarch":{"xref_id":"0011067"}}}


id: PBO:0089259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42 GTPase complex scaffold subunit Scd2","termid":"PBO:0089259"}


id: PBO:0087868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator that enhances pseudohyphal growth; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; regulates expression of FLO11, an adhesin required for pseudohyphal filament formation; similar to StuA, an A. nidulans developmental regulator; potential Cdc28p substrate; PHD1 has a paralog, SOK2, that arose from the whole genome duplication","termid":"PBO:0087868"}


id: MONDO:0006009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Encephalitis resulting from viral infection.","definition_xrefs":["NCIT:C35302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious encephalitis","termid":"MONDO:0020067"},{"relation_name":"is_a","term_name":"viral infection of central nervous system","termid":"MONDO:0024318"},{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral encephalitis","secondary_identifiers":["SCTID:34476008","DOID:646","Orphanet:98252","GARD:19433","MEDGEN:116719","MedDRA:10058805","EFO:0007538","UMLS:C0243010"],"synonyms":[{"name":"Viruses caused encephalitis","type":"exact"},{"name":"Viruses encephalitis","type":"exact"},{"name":"viral encephalitis","type":"exact"}],"termid":"MONDO:0006009","xrefs":{"Monarch":{"xref_id":"0006009"}}}


id: PBO:0109220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6S antisense RNA 1","termid":"PBO:0109220"}


id: GO:1900781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the indole alkaloid fumiquinazoline C.","definition_xrefs":["PMID:20225828","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"fumiquinazoline C biosynthetic process","secondary_identifiers":["GO:1900773","GO:1900779","GO:1900775"],"synonyms":[{"name":"fumiquinazoline C anabolism","type":"exact"},{"name":"fumiquinazoline C biosynthesis","type":"exact"},{"name":"fumiquinazoline C formation","type":"exact"},{"name":"fumiquinazoline C metabolic process","type":"broad"},{"name":"fumiquinazoline C metabolism","type":"broad"},{"name":"fumiquinazoline C synthesis","type":"exact"},{"name":"fumiquinazoline biosynthesis","type":"exact"},{"name":"fumiquinazoline biosynthetic process","type":"broad"},{"name":"fumiquinazoline metabolic process","type":"broad"},{"name":"fumiquinazoline metabolism","type":"broad"},{"name":"fumiquinazolines synthesis","type":"related"}],"termid":"GO:1900781"}


id: PBO:0088439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis factor recycling AAA family ATPase","termid":"PBO:0088439"}


id: FYPO:0003170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of arginine into the cell occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal arginine import","termid":"FYPO:0001654"},{"relation_name":"is_a","term_name":"increased amino acid import during vegetative growth","termid":"FYPO:0003169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased arginine import","synonyms":[{"name":"increased L-arginine import","type":"exact"},{"name":"increased L-arginine import across plasma membrane","type":"exact"},{"name":"increased L-arginine uptake","type":"exact"},{"name":"increased arginine import during mitotic cell cycle","type":"related"},{"name":"increased arginine import during vegetative growth","type":"exact"},{"name":"increased arginine import into cell","type":"exact"}],"termid":"FYPO:0003170"}


id: PBO:0063538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudopodium enriched atypical kinase 1","termid":"PBO:0063538"}


id: GO:0021616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the glossopharyngeal nerve. This process pertains to the initial formation of a structure from unspecified parts. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion.","definition_xrefs":["GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"glossopharyngeal nerve morphogenesis","termid":"GO:0021615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glossopharyngeal nerve formation","synonyms":[{"name":"CN IX biosynthesis","type":"related"},{"name":"CN IX formation","type":"related"}],"termid":"GO:0021616"}


id: PR:O94674
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC776.06c gene.","definition_xrefs":["UniProtKB:O94674","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFI1-like protein C776.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.06c","synonyms":[{"name":"Spom972h-SPBC776.06c","type":"exact"}],"termid":"PR:O94674"}


id: PBO:0059114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motile sperm domain containing 3","termid":"PBO:0059114"}


id: PBO:0056980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 29c","termid":"PBO:0056980"}


id: GO:0048341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the paraxial mesoderm. This process pertains to the initial formation of the structure from unspecified parts.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm formation","termid":"GO:0001707"},{"relation_name":"part_of","term_name":"paraxial mesoderm morphogenesis","termid":"GO:0048340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesoderm formation","secondary_identifiers":["Reactome:R-HSA-9793380"],"termid":"GO:0048341"}


id: GO:0019575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of sucrose, catalyzed by the enzyme beta-fructofuranosidase (EC:3.2.1.26).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete sucrose catabolic process, using beta-fructofuranosidase (obsolete GO:0019575)","synonyms":[{"name":"sucrose breakdown, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose catabolic process, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose catabolism, using beta-fructofuranosidase","type":"exact"},{"name":"sucrose degradation, using beta-fructofuranosidase","type":"exact"}],"termid":"GO:0019575"}


id: MONDO:0100302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any LADD syndrome in which the cause of the disease is a variation in the FGFR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LADD syndrome","termid":"MONDO:0007872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"LADD syndrome 1","secondary_identifiers":["OMIM:149730","UMLS:C5774323","MEDGEN:1824096"],"synonyms":[{"name":"LADD1","type":"exact"},{"name":"lacrimoauriculodentodigital syndrome 1","type":"exact"}],"termid":"MONDO:0100302","xrefs":{"Monarch":{"xref_id":"0100302"}}}


id: PBO:0029876
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3_acetylation","termid":"PBO:0029876"}


id: PBO:0042760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 43","termid":"PBO:0042760"}


id: PBO:0062576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily D member 5 pseudogene","termid":"PBO:0062576"}


id: PBO:0016545
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SRT1 and RER2","termid":"PBO:0016545"}


id: PBO:0085771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein localized to COPII-coated vesicles; forms a complex with Erv41p; involved in the membrane fusion stage of transport","termid":"PBO:0085771"}


id: PBO:0018011
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the aconitase+bL21 domain localize to mitochondria and the nucleus, the sole aconitase domain localizes to mitochondria","termid":"PBO:0018011"}


id: GO:0006130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-phosphofructokinase reduction (obsolete GO:0006130)","synonyms":[{"name":"6-phosphofructokinase reduction","type":"exact"}],"termid":"GO:0006130"}


id: SO:1000123
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000123 polypeptide_post_translational_processing_affected (obsolete SO:1000123)","synonyms":[{"name":"polypeptide_post-translational_processing_affected","type":"related"}],"termid":"SO:1000123"}


id: GO:2000756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidyl-lysine acetylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein acetylation","termid":"GO:1901983"},{"relation_name":"regulates","term_name":"peptidyl-lysine acetylation","termid":"GO:0018394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidyl-lysine acetylation","termid":"GO:2000756"}


id: MONDO:0014919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplastic polyposis syndrome","termid":"MONDO:0015524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"sessile serrated polyposis cancer syndrome","secondary_identifiers":["OMIM:617108","MEDGEN:934681","UMLS:C4310714"],"synonyms":[{"name":"SSPCS","type":"exact"},{"name":"sessile serrated polyposis cancer syndrome","type":"exact"},{"name":"sessile serrated polyposis cancer syndrome; SSPCS","type":"exact"}],"termid":"MONDO:0014919","xrefs":{"Monarch":{"xref_id":"0014919"}}}


id: MONDO:0009726
data:
  {"annotated_genes":["SJAG_04541","SJAG_04969","SJAG_03151","SJAG_04290"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054698"},{"annotations":[86888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054700"},{"annotations":[85762,85763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054699"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"type 1 interferonopathy of childhood","termid":"MONDO:0957408"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03151":null,"SJAG_04290":null,"SJAG_04541":null,"SJAG_04969":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025"],"is_obsolete":false,"name":"proteosome-associated autoinflammatory syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:256040","Orphanet:325004","ICD9:709.8","NANDO:1200867","DOID:0060913","Orphanet:324999","SCTID:702449004","NANDO:2200435","Orphanet:324977","MEDGEN:376827","MESH:C538334","UMLS:C1850568","GARD:13824","DOID:0050553","Orphanet:2615"],"synonyms":[{"name":"ALDD","type":"exact"},{"name":"ALDD syndrome","type":"exact"},{"name":"CANDLE syndrome","type":"exact"},{"name":"JMP syndrome","type":"exact"},{"name":"Joint contractures - muscle atrophy - microcytic anaemia - panniculitis-induced lipodystrophy","type":"exact"},{"name":"Joint contractures - muscle atrophy - microcytic anemia - panniculitis-induced lipodystrophy","type":"exact"},{"name":"Joint contractures, muscular atrophy, microcytic Anemia, and panniculitis-induced lipodystrophy","type":"exact"},{"name":"Joint contractures-muscular atrophy-microcytic anemia-panniculitis-associated lipodystrophy syndrome","type":"exact"},{"name":"NNS","type":"exact"},{"name":"Nakajo Nishimura syndrome","type":"exact"},{"name":"Nakajo syndrome","type":"exact"},{"name":"Nakajo-Nishimura syndrome","type":"exact"},{"name":"PRAAS","type":"exact"},{"name":"amyotrophy fat tissue anomaly","type":"related"},{"name":"amyotrophy-fat tissue anomaly syndrome","type":"related"},{"name":"autoinflammation, lipodystrophy, and dermatosis syndrome","type":"exact"},{"name":"autoinflammation-lipodystrophy-dermatosis syndrome","type":"exact"},{"name":"chronic atypical neutrophilic dermatosis with lipodystrophy and elevated temperature","type":"exact"},{"name":"chronic atypical neutrophilic dermatosis with lipodystrophy and elevated temperature syndrome","type":"exact"},{"name":"chronic atypical neutrophilic dermatosis-lipodystrophy-elevated temperature syndrome","type":"exact"},{"name":"joint contractures, muscular atrophy, microcytic anemia, and panniculitis-induced lipodystrophy","type":"exact"},{"name":"nodular erythema digital changes","type":"related"},{"name":"proteasome disability syndrome","type":"exact"},{"name":"proteasome-associated autoinflammatory syndrome","type":"exact"},{"name":"secondary hypertrophic osteoperiostosis with pernio","type":"exact"}],"termid":"MONDO:0009726","terms_by_termid":{"MONDO:0054698":null,"MONDO:0054699":null,"MONDO:0054700":null},"xrefs":{"Monarch":{"xref_id":"0009726"}}}


id: PR:O59743
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC530.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C530.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.07c","synonyms":[{"name":"Spom972h-SPBC530.07c","type":"exact"}],"termid":"PR:O59743"}


id: PBO:0111440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mug28, implicated in mRNA processing","termid":"PBO:0111440"}


id: MONDO:1012762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any polyneuropathy that occurs in dogs due to a mutation in the RAB3GAP1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"polyneuropathy, dog","termid":"MONDO:1012354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyneuropathy, RAB3GAP1-related, dog","secondary_identifiers":["OMIA:001970-9615"],"synonyms":[{"name":"NVSD","type":"exact"},{"name":"POANV","type":"exact"},{"name":"neuronal vacuolation and spinocerebellar degeneration, dog","type":"related"},{"name":"polyneuropathy, ocular abnormalities and neuronal vacuolation, dog","type":"related"}],"termid":"MONDO:1012762","xrefs":{"Monarch":{"xref_id":"1012762"}}}


id: PBO:0086364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aldose 1-epimerase superfamily protein; non-essential gene; highly expressed under anaeorbic conditions","termid":"PBO:0086364"}


id: GO:0048443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stamen over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ development","termid":"GO:0048437"},{"relation_name":"is_a","term_name":"phyllome development","termid":"GO:0048827"},{"relation_name":"part_of","term_name":"androecium development","termid":"GO:0048466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stamen development","secondary_identifiers":["GO:0048425"],"termid":"GO:0048443"}


id: RO:0002527
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x does not overlaps the sequence of x if and only if there is no z such that x has a subsequence z and z is a subsequence of y.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequentially_related_to","termid":"RO:0002514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does_not_overlap_sequence_of","termid":"RO:0002527"}


id: PBO:0078573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51G","termid":"PBO:0078573"}


id: GO:0062159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-membrane-bounded organelle of eukaryotic cells, especially Protozoa, that fills with water from the cytoplasm and then discharges this externally. One of its functions is osmoregulatory.","definition_xrefs":["PMID:23890380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"contractile vacuole complex","synonyms":[{"name":"CVC","type":"related"}],"termid":"GO:0062159"}


id: PBO:0068431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 1","termid":"PBO:0068431"}


id: PBO:0075738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 19","termid":"PBO:0075738"}


id: PBO:0082910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine desulphydrase, enables growth on cysteine as nitrogen source; involved in the production of thiols; null mutant displays increased levels of spontaneous Rad52p foci; expression induced by nitrogen limitation in a GLN3, GAT1-dependent manner and by copper levels in a Mac1-dependent manner","termid":"PBO:0082910"}


id: PBO:0047371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 3","termid":"PBO:0047371"}


id: PATO:0000940
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"obsolete irregular shape (obsolete PATO:0000940)","termid":"PATO:0000940"}


id: PBO:0005813
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe CAspase 1","termid":"PBO:0005813"}


id: PBO:0048974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase 3","termid":"PBO:0048974"}


id: MONDO:0958160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small cell sarcoma that is characterized by the presence of EWSR1 or FUS fusions involving partners unrelated to the ETS gene family.","definition_xrefs":["DOID:0081406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell sarcoma","termid":"MONDO:0006974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"round cell sarcoma with EWSR1-non-ETS fusion","secondary_identifiers":["NCIT:C178459","MEDGEN:1790023","UMLS:C4727985"],"termid":"MONDO:0958160","xrefs":{"Monarch":{"xref_id":"0958160"}}}


id: GO:0016704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for oxidoreductases acting on single donors with incorporation of molecular oxygen that cannot be more accurated categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, miscellaneous (obsolete GO:0016704)","synonyms":[{"name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, miscellaneous","type":"exact"}],"termid":"GO:0016704"}


id: GO:1900850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pseurotin A biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of pseurotin A biosynthetic process","termid":"GO:1900849"},{"relation_name":"negatively_regulates","term_name":"pseurotin A biosynthetic process","termid":"GO:1900790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of pseurotin A biosynthetic process","synonyms":[{"name":"down regulation of pseurotin A biosynthetic process","type":"exact"},{"name":"down-regulation of pseurotin A biosynthetic process","type":"exact"},{"name":"downregulation of pseurotin A biosynthetic process","type":"exact"}],"termid":"GO:1900850"}


id: MONDO:0001444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic infection caused by Trypanosoma cruzi. It is transmitted by insect bites. It is characterized by an acute and chronic phase; in the acute phase patients may have fever, malaise, and swelling at the site of the insect bite. In the chronic phase patients develop hepatosplenomegaly, lymphadenopathy, cardiomyopathy and arrhythmias.","definition_xrefs":["NCIT:C84629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trypanosomiasis","termid":"MONDO:0000940"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chagas disease","secondary_identifiers":["icd11.foundation:1365585570","GARD:18795","ICD10CM:B57","MESH:D014355","ICD9:086.2","MedDRA:10001935","DOID:12140","UMLS:C0041234","SCTID:77506005","MEDGEN:11935","Orphanet:3386"],"synonyms":[{"name":"American trypanosomiasis","type":"related"},{"name":"Chagas disease","type":"exact"},{"name":"Chagas' disease","type":"exact"},{"name":"Chagas' disease with digestive system involvement","type":"exact"},{"name":"Chagas' disease with nervous system involvement","type":"exact"},{"name":"Chagas' disease with other organ involvement","type":"exact"},{"name":"Chagas-mazza disease","type":"related"},{"name":"Trypanosoma cruzi caused disease or disorder","type":"exact"},{"name":"Trypanosoma cruzi disease or disorder","type":"exact"},{"name":"Trypanosoma cruzi infectious disease","type":"exact"},{"name":"infection by trypanosoma cruzi","type":"exact"},{"name":"infection caused by trypanosoma cruzi","type":"related"},{"name":"south American trypanosomiasis","type":"related"}],"termid":"MONDO:0001444","xrefs":{"Monarch":{"xref_id":"0001444"}}}


id: GO:0046805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent linkage of heme and a protein via 1'-L-histidine (otherwise known as tau-heme-histidine, tele-heme-histidine).","definition_xrefs":["RESID:AA0329"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-heme linkage via 1'-L-histidine (obsolete GO:0046805)","synonyms":[{"name":"protein-haem linkage via 1'-L-histidine","type":"exact"}],"termid":"GO:0046805"}


id: PBO:0017009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug100","termid":"PBO:0017009"}


id: PBO:0046102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 5","termid":"PBO:0046102"}


id: PBO:0025444
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organic aciduria","termid":"PBO:0025444"}


id: GO:0050531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(alpha-D-mannosyl)-3-phosphoglycerate + H2O = 2-(alpha-D-mannosyl)-D-glycerate + phosphate.","definition_xrefs":["EC:3.1.3.70","RHEA:19309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"mannosyl-3-phosphoglycerate phosphatase activity","secondary_identifiers":["KEGG_REACTION:R05790","MetaCyc:3.1.3.70-RXN"],"synonyms":[{"name":"alpha-D-mannosyl-3-phosphoglycerate phosphohydrolase activity","type":"related"}],"termid":"GO:0050531"}


id: FYPO:0006306
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[119760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119527],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[119748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[119531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[119742,120039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[119847],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[119781],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[119749,119730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119528],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which an actin filament-based process, i.e. any process that depends upon or alters the actin cytoskeleton, is abnormal.","definition_xrefs":["GO:0030029","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":10,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04280","SJAG_04522","SJAG_01143","SJAG_02392","SJAG_03596"],"name":"abnormal actin filament-based process","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143","SJAG_04522","SJAG_04703","SJAG_03596","SJAG_04280","SJAG_02592"],"single_locus_genotype_uniquenames":["rga4delta","pom1delta","for3delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","mid1delta","sty1delta"],"synonyms":[{"name":"abnormal actin filament-based process during mitotic cell cycle","type":"related"},{"name":"abnormal actin filament-based process during vegetative growth","type":"exact"},{"name":"abnormal microfilament-based process","type":"related"}],"termid":"FYPO:0006306","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0070522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 21","termid":"PBO:0070522"}


id: GO:0072379
data:
  {"annotated_genes":["SJAG_01496","SJAG_03865"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79853,115480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072380"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in the post-translational delivery of tail-anchored (TA) membrane proteins to the endoplasmic reticulum. TA membrane proteins, also called type II transmembrane proteins, contain a single C-terminal transmembrane region. Some ER membrane insertion complex subunits are conserved between different species such as mammals and budding yeast.","definition_xrefs":["PMID:20676083","GOC:mah","PMID:20850366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01496":null,"SJAG_03865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005829","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"ER membrane insertion complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"endoplasmic reticulum membrane insertion complex","type":"exact"}],"termid":"GO:0072379","terms_by_termid":{"GO:0072380":null}}


id: GO:1903353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nucleus organization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16943282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"nucleus organization","termid":"GO:0006997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nucleus organization","synonyms":[{"name":"regulation of nuclear morphology","type":"related"},{"name":"regulation of nuclear organisation","type":"exact"},{"name":"regulation of nuclear organization","type":"exact"},{"name":"regulation of nuclear organization and biogenesis","type":"related"},{"name":"regulation of nucleus organization and biogenesis","type":"related"}],"termid":"GO:1903353"}


id: GO:0035201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation and/or maintenance of a lineage boundary between anterior and posterior compartments of the leg disc that cells cannot cross, thus separating the populations of cells in each compartment.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior lineage restriction, imaginal disc","termid":"GO:0048099"},{"relation_name":"part_of","term_name":"leg disc anterior/posterior pattern formation","termid":"GO:0035200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leg disc anterior/posterior lineage restriction","termid":"GO:0035201"}


id: PBO:0114356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, probable TBC1 domain (GAP)","termid":"PBO:0114356"}


id: PBO:0055778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lon peptidase 2, peroxisomal","termid":"PBO:0055778"}


id: GO:0106164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay.","definition_xrefs":["GOC:vw","PMID:30601114"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of exonucleolytic catabolism of deadenylated mRNA (obsolete GO:0106164)","termid":"GO:0106164"}


id: PATO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000201 memory (obsolete PATO:0000201)","termid":"PATO:0000201"}


id: PBO:0050253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 31","termid":"PBO:0050253"}


id: MONDO:0100476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing acquired partial lipodystrophy.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipodystrophy, partial, acquired, susceptibility to","secondary_identifiers":["MEDGEN:854363","UMLS:C3887501","OMIM:608709"],"synonyms":[{"name":"APLD, susceptibility to","type":"exact"},{"name":"barraquer-simons syndrome","type":"exact"},{"name":"lipodystrophy, cephalothoracic type","type":"exact"},{"name":"lipodystrophy, partial, acquired, susceptibility","type":"exact"},{"name":"lipodystrophy, partial, progressive","type":"exact"}],"termid":"MONDO:0100476","xrefs":{"Monarch":{"xref_id":"0100476"}}}


id: GO:0052671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: geranylgeraniol + nucleoside triphosphate = all-trans-geranyl-geranyl monophosphate + nucleoside diphosphate.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete geranylgeraniol kinase activity (obsolete GO:0052671)","synonyms":[{"name":"geranylgeraniol phosphotransferase activity","type":"exact"}],"termid":"GO:0052671"}


id: PBO:0063800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase regulatory subunit alpha 1","termid":"PBO:0063800"}


id: MONDO:1010453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conotruncal heart malformations that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conotruncal heart malformations, non-human animal","termid":"MONDO:1010012"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conotruncal heart malformations, dog","secondary_identifiers":["OMIA:000224-9615"],"termid":"MONDO:1010453","xrefs":{"Monarch":{"xref_id":"1010453"}}}


id: PR:Q9UTL5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein 710 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor IIIA (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.09c","secondary_identifiers":["UniProtKB:Q9UTL5"],"synonyms":[{"name":"Spom972h-ZNF710","type":"exact"},{"name":"TFIIIA (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTL5"}


id: PBO:0083881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferric reductase; reduces siderophore-bound iron prior to uptake by transporters; expression induced by low iron levels","termid":"PBO:0083881"}


id: GO:0014712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of branchiomeric skeletal muscle development. Branchiomeric skeletal muscle development is the process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of branchiomeric skeletal muscle development","termid":"GO:0014711"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle tissue development","termid":"GO:0048643"},{"relation_name":"positively_regulates","term_name":"branchiomeric skeletal muscle development","termid":"GO:0014707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of branchiomeric skeletal muscle development","termid":"GO:0014712"}


id: PBO:0028027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_meiosis_II","termid":"PBO:0028027"}


id: MONDO:0008125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 5","secondary_identifiers":["DOID:0080083","MESH:C563503","OMIM:164800","MEDGEN:318994","UMLS:C1833909"],"synonyms":[{"name":"NDNC5","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 5","type":"related"},{"name":"nonsyndromic congenital nail disorder type 5","type":"exact"},{"name":"onycholysis, hereditary distal","type":"related"},{"name":"onycholysis, partial, with scleronychia","type":"related"}],"termid":"MONDO:0008125","xrefs":{"Monarch":{"xref_id":"0008125"}}}


id: GO:0060237
data:
  {"annotated_genes":["SJAG_00163","SJAG_04462","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71939,87914,111358],"is_not":false,"summary":null,"term":"GO:0060237"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the formation, arrangement of constituent parts, or disassembly of the fungal-type cell wall.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of cell wall organization or biogenesis","termid":"GO:1903338"},{"relation_name":"regulates","term_name":"fungal-type cell wall organization","termid":"GO:0031505"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_01181":null,"SJAG_04462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"regulation of fungal-type cell wall organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of fungal-type cell wall organisation","type":"exact"},{"name":"regulation of fungal-type cell wall organization and biogenesis","type":"related"}],"termid":"GO:0060237","terms_by_termid":{"GO:0060237":null}}


id: MONDO:0000706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A colitis caused by the introduction of harsh chemicals to the colon by an enema or other procedure. Chemical colitis can resemble ulcerative colitis, infectious colitis and pseudomembranous colitis endoscopically.","direct_ancestors":[{"relation_name":"is_a","term_name":"colitis","termid":"MONDO:0005292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"chemical colitis","secondary_identifiers":["ICD9:558.9","SCTID:72965009","DOID:0060186","ICD9:558"],"termid":"MONDO:0000706","xrefs":{"Monarch":{"xref_id":"0000706"}}}


id: PR:G2TRJ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRJ4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.19","synonyms":[{"name":"Spom972h-tam1","type":"exact"},{"name":"transcripts altered in meiosis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRJ4"}


id: MOD:01306
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-hexosaminyl-L-threonine.","definition_xrefs":["Unimod:454#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-threonine","termid":"MOD:00005"},{"relation_name":"is_a","term_name":"hexosaminylated residue","termid":"MOD:00876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-hexosaminylated threonine","synonyms":[{"name":"HexN","type":"related"},{"name":"Hexosamine","type":"related"}],"termid":"MOD:01306"}


id: MONDO:0030924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"proteosome-associated autoinflammatory syndrome","termid":"MONDO:0009726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025"],"is_obsolete":false,"name":"proteasome-associated autoinflammatory syndrome 5","secondary_identifiers":["MEDGEN:1779962","UMLS:C5543027","GARD:18448","OMIM:619175","DOID:0060919"],"synonyms":[{"name":"PRAAS5","type":"exact"},{"name":"proteasome-associated autoinflammatory syndrome 5","type":"exact"}],"termid":"MONDO:0030924","xrefs":{"Monarch":{"xref_id":"0030924"}}}


id: PBO:0026925
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_serine_phosphorylation_at_RxxS_site","termid":"PBO:0026925"}


id: MONDO:0014118
data:
  {"annotated_genes":["SJAG_03889"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85370],"is_not":false,"summary":null,"term":"MONDO:0014118"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive severe congenital neutropenia","termid":"MONDO:0028226"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025","MONDO:0005570"],"is_obsolete":false,"name":"congenital neutropenia-myelofibrosis-nephromegaly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3809031","GARD:17585","MEDGEN:815361","OMIM:615285","Orphanet:369852","DOID:0112132"],"synonyms":[{"name":"SCN5","type":"related"},{"name":"congenital neutropenia-bone marrow fibrosis-nephromegaly syndrome","type":"exact"},{"name":"neutropenia, severe congenital, 5, autosomal recessive","type":"related"},{"name":"vps45 deficiency","type":"exact"}],"termid":"MONDO:0014118","terms_by_termid":{"MONDO:0014118":null},"xrefs":{"Monarch":{"xref_id":"0014118"}}}


id: GO:0006589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of octopamine, 1-(p-hydroxyphenyl)-2-aminoethanol. The D enantiomer is about one-tenth as active as norepinephrine and is found in the salivary glands of Octopus and Eledone species.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"octopamine metabolic process","termid":"GO:0046333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"octopamine biosynthetic process","synonyms":[{"name":"octopamine anabolism","type":"exact"},{"name":"octopamine biosynthesis","type":"exact"},{"name":"octopamine formation","type":"exact"},{"name":"octopamine synthesis","type":"exact"}],"termid":"GO:0006589"}


id: FYPO:0002541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus during vegetative growth","termid":"FYPO:0001130"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to nucleoplasm","synonyms":[{"name":"increased protein localisation to nucleoplasm","type":"exact"},{"name":"increased protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"increased protein localization to nucleoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0002541"}


id: PBO:0027087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-arrested_mitotic_spindle_elongation_during_anaphase","termid":"PBO:0027087"}


id: GO:0002811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antifungal peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antifungal peptide production","termid":"GO:0002789"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002806"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide biosynthetic process","termid":"GO:0002810"},{"relation_name":"negatively_regulates","term_name":"antifungal peptide biosynthetic process","termid":"GO:0002783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of antifungal peptide biosynthetic process","synonyms":[{"name":"down regulation of antifungal peptide biosynthetic process","type":"exact"},{"name":"down-regulation of antifungal peptide biosynthetic process","type":"exact"},{"name":"downregulation of antifungal peptide biosynthetic process","type":"exact"},{"name":"inhibition of antifungal peptide biosynthetic process","type":"narrow"}],"termid":"GO:0002811"}


id: PBO:0068250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal N2","termid":"PBO:0068250"}


id: RO:0002321
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that is mediated in some way by the environment or environmental feature (ENVO:00002297)","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecologically_related_to","termid":"RO:0002321"}


id: GO:0002708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of lymphocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated immunity","termid":"GO:0002705"},{"relation_name":"is_a","term_name":"regulation of lymphocyte mediated immunity","termid":"GO:0002706"},{"relation_name":"positively_regulates","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte mediated immunity","synonyms":[{"name":"activation of lymphocyte mediated immunity","type":"narrow"},{"name":"stimulation of lymphocyte mediated immunity","type":"narrow"},{"name":"up regulation of lymphocyte mediated immunity","type":"exact"},{"name":"up-regulation of lymphocyte mediated immunity","type":"exact"},{"name":"upregulation of lymphocyte mediated immunity","type":"exact"}],"termid":"GO:0002708"}


id: GO:0070341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of fat cells by cell division, resulting in the expansion of their population. A fat cell is an animal connective tissue cell specialized for the synthesis and storage of fat.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fat cell proliferation","synonyms":[{"name":"adipocyte proliferation","type":"exact"},{"name":"adipose cell proliferation","type":"exact"}],"termid":"GO:0070341"}


id: MONDO:0009205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Faciocardiorenal syndrome is a very rare syndrome characterized by intellectual deficit, horseshoe kidney, and congenital heart defects.","definition_xrefs":["Orphanet:1973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faciocardiorenal syndrome","secondary_identifiers":["MEDGEN:208649","OMIM:227280","GARD:2230","SCTID:723333000","MESH:C536388","UMLS:C0795936"],"synonyms":[{"name":"Eastman Bixler syndrome","type":"related"},{"name":"Eastman-Bixler syndrome","type":"exact"},{"name":"faciocardiorenal syndrome","type":"exact"}],"termid":"MONDO:0009205","xrefs":{"Monarch":{"xref_id":"0009205"}}}


id: SO:1001188
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is alternately spliced, but encodes only one polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encodes_alternately_spliced_transcripts","termid":"SO:0000463"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_1_polypeptide","synonyms":[{"name":"encodes 1 polypeptide","type":"exact"}],"termid":"SO:1001188"}


id: GO:0015613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete galactose/glucose (methylgalactoside) porter activity (obsolete GO:0015613)","synonyms":[{"name":"galactose/glucose (methylgalactoside) porter activity","type":"exact"}],"termid":"GO:0015613"}


id: PBO:0003726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol regulatory element binding protein, transcription factor Sre1","termid":"PBO:0003726"}


id: PBO:0087625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the cytosolic chaperonin Cct ring complex; related to Tcp1p, required for the assembly of actin and tubulins in vivo","termid":"PBO:0087625"}


id: PBO:0055119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2538","termid":"PBO:0055119"}


id: MONDO:0007151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arms, malformation of","secondary_identifiers":["OMIM:107900","UMLS:C1862534","MESH:C566258","MEDGEN:350694"],"synonyms":[{"name":"arms, malformation of","type":"exact"}],"termid":"MONDO:0007151","xrefs":{"Monarch":{"xref_id":"0007151"}}}


id: FYPO:0005731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of arginase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal arginase activity","termid":"FYPO:0005730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased arginase activity","synonyms":[{"name":"reduced arginase activity","type":"exact"}],"termid":"FYPO:0005731"}


id: PBO:0076088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STT3A antisense RNA 1","termid":"PBO:0076088"}


id: PBO:0082482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cardiolipin synthase; produces cardiolipin, which is a phospholipid of the mitochondrial inner membrane that is required for normal mitochondrial membrane potential and function and for correct integration of membrane-multispanning proteins into the mitochondrial outer membrane; required to maintain tubular mitochondrial morphology and functions in mitochondrial fusion; also required for normal vacuolar ion homeostasis","termid":"PBO:0082482"}


id: PBO:0077364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM105 long non-coding RNA","termid":"PBO:0077364"}


id: GO:0098710
data:
  {"annotated_genes":["SJAG_03777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112930],"is_not":false,"summary":null,"term":"GO:0098710"}]},"cv_name":"biological_process","definition":"The directed movement of guanine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"guanine transmembrane transport","termid":"GO:1903716"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"guanine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0061489"],"synonyms":[{"name":"guanine import into cell","type":"exact"}],"termid":"GO:0098710","terms_by_termid":{"GO:0098710":null}}


id: MONDO:0004374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma arising from the soft tissue, and occurring in adults.","definition_xrefs":["NCIT:C7925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"extraosseous osteosarcoma","termid":"MONDO:0002621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult extraskeletal osteosarcoma","secondary_identifiers":["MEDGEN:83016","DOID:7827","UMLS:C0278985"],"synonyms":[{"name":"adult extraosseous osteosarcoma","type":"exact"},{"name":"adult extraskeletal osteosarcoma","type":"exact"},{"name":"extraosseous osteosarcoma of adults","type":"exact"},{"name":"extraskeletal osteosarcoma","type":"broad"}],"termid":"MONDO:0004374","xrefs":{"Monarch":{"xref_id":"0004374"}}}


id: MONDO:0019072
data:
  {"annotated_genes":["SJAG_03363","SJAG_03011","SJAG_05194","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[87367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013995"},{"annotations":[87304,87305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[86209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[87243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","definition":"A cholestasis characterized by impairment of the bile flow caused by obstruction located in the liver.","definition_xrefs":["DOID:1852"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic metabolic liver disease (obsolete MONDO:0015115)","termid":"MONDO:0015115"},{"relation_name":"excluded_subClassOf","term_name":"pregnancy disorder","termid":"MONDO:0024575"},{"relation_name":"is_a","term_name":"cholestasis","termid":"MONDO:0001751"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"intrahepatic cholestasis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D002780","UMLS:C0008372","MEDGEN:3042","SCTID:235888006"],"termid":"MONDO:0019072","terms_by_termid":{"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0013995":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0019072"}}}


id: PR:O74316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15D4.11c gene.","definition_xrefs":["UniProtKB:O74316","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C15D4.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.11c","synonyms":[{"name":"Spom972h-SPBC15D4.11c","type":"exact"}],"termid":"PR:O74316"}


id: PBO:0082637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glucose deprivation induced stress granules; involved in P-body-dependent granule assembly; regulates TORC1 signaling and autophagy; interacts with Pab1p to regulate mRNA polyadenylation; interacts with Mkt1p to regulate HO translation; protein increases in abundance and relative distribution to the nucleus increases upon DNA replication stress; similar to human ataxin-2","termid":"PBO:0082637"}


id: GO:0052662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-zeaxanthin + 4 H+ + 2 O2 + 4 reduced [2Fe-2S]-[ferredoxin] = all-trans-violaxanthin + 2 H2O + 4 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:32443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"zeaxanthin epoxidase activity","secondary_identifiers":["GO:0009540","GO:0052663","MetaCyc:RXN-13193","KEGG_REACTION:R10070","EC:1.14.15.21"],"synonyms":[{"name":"antheraxanthin epoxidase activity","type":"narrow"},{"name":"zea-epoxidase activity","type":"related"},{"name":"zeaxanthin epoxidase [overall] activity","type":"related"}],"termid":"GO:0052662"}


id: GO:0015734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of taurine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkanesulfonate transmembrane transport","termid":"GO:0042918"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"taurine transmembrane transport","synonyms":[{"name":"taurine transport","type":"broad"}],"termid":"GO:0015734"}


id: GO:1990520
data:
  {"annotated_genes":["SJAG_00460","SJAG_02542"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103618,117966],"is_not":false,"summary":null,"term":"GO:1990520"}]},"cv_name":"cellular_component","definition":"A protein complex that includes separase (a protease which cleaves cohesin as part of chromosome separation) and securin, a protease inhibitor. Chromosome separation is inhibited until securin is degraded by the Anaphase Promoting Complex (APC).","definition_xrefs":["GOC:dos","PMID:8978688","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase complex","termid":"GO:1905369"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00460":null,"SJAG_02542":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"separase-securin complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Cut1-2 complex","type":"exact"}],"termid":"GO:1990520","terms_by_termid":{"GO:1990520":null}}


id: PBO:0072669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor transporter protein 2","termid":"PBO:0072669"}


id: PBO:0045125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dematin actin binding protein","termid":"PBO:0045125"}


id: PBO:0086295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in regulating Swe1p-dependent polarized growth; involved in maintaining Cdc55p in the cytoplasm where it promotes mitotic entry; involved in mitotic exit through Cdc14p regulation; interacts with silencing proteins at telomeres; has a role in Bcy1p localization; implicated in mRNA nuclear export; ZDS1 has a paralog, ZDS2, that arose from the whole genome duplication","termid":"PBO:0086295"}


id: PBO:0075538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E18","termid":"PBO:0075538"}


id: PBO:0082279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anti-repressor that increases 2 micron plasmid copy number; increases 2 micron plasmid copy number by relieving repression of the FLP1 site-specific recombinase caused by the Rep1-Rep2p trascription regulator; also itself repressed by the Rep1p-Rep2p complex","termid":"PBO:0082279"}


id: PBO:0057369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ak","termid":"PBO:0057369"}


id: GO:0102510
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pelargonidin 3-O-beta-D-glucoside + 1-O-vanilloyl-beta-D-glucose = anthocyanidin 3,5-di-O-beta-D-glucoside + vanillate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete pelargonidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose dependent) activity (obsolete GO:0102510)","termid":"GO:0102510"}


id: GO:0043025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell body","termid":"GO:0044297"},{"relation_name":"part_of","term_name":"somatodendritic compartment","termid":"GO:0036477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuronal cell body","secondary_identifiers":["NIF_Subcellular:sao1044911821","Wikipedia:Soma_(biology)"],"synonyms":[{"name":"neuron cell body","type":"exact"},{"name":"neuronal cell soma","type":"exact"}],"termid":"GO:0043025"}


id: PBO:0049232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 5","termid":"PBO:0049232"}


id: PBO:0043191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 2","termid":"PBO:0043191"}


id: PR:Q9C0W5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC800.14c gene.","definition_xrefs":["UniProtKB:Q9C0W5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial membrane protein C800.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.14c","synonyms":[{"name":"Spom972h-SPBC800.14c","type":"exact"}],"termid":"PR:Q9C0W5"}


id: GO:0010966
data:
  {"annotated_genes":["SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phosphate transport. Phosphate transport is the directed movement of phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"phosphate ion transport","termid":"GO:0006817"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010966","terms_by_termid":{"GO:2000185":null}}


id: PBO:0029350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_tRNA_level_during_vegetative_growth","termid":"PBO:0029350"}


id: MONDO:0019526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Erythema elevatum diutinum (EED) is a distinctive form of chronic cutaneous vasculitis, belonging to the group of the neutrophilic dermatoses.","definition_xrefs":["Orphanet:90000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune complex mediated vasculitis","termid":"MONDO:0015491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythema elevatum diutinum","secondary_identifiers":["icd11.foundation:754210950","SCTID:58872001","ICD9:695.89","MedDRA:10056968","MEDGEN:75517","MESH:C535509","DOID:0060567","ICD10CM:L95.1","UMLS:C0263398","GARD:8653"],"termid":"MONDO:0019526","xrefs":{"Monarch":{"xref_id":"0019526"}}}


id: MONDO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or subacute inflammatory process of the central nervous system characterized histologically by multiple foci of perivascular demyelination. Symptom onset usually occurs several days after an acute viral infection or immunization, but it may coincide with the onset of infection or rarely no antecedent event can be identified. Clinical manifestations include confusion, somnolence, fever, nuchal rigidity, and involuntary movements. The illness may progress to coma and eventually be fatal. (Adams et al., Principles of Neurology, 6th ed, p921)","definition_xrefs":["MESH:D004673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis","termid":"MONDO:0019956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-vaccinal encephalitis","secondary_identifiers":["DOID:13664","ICD9:323.51","MEDGEN:152946","UMLS:C0751101","SCTID:31367003"],"synonyms":[{"name":"encephalitis following immunisation procedures","type":"exact"},{"name":"encephalitis following immunization procedures","type":"exact"},{"name":"postvaccinal encephalomyelitis","type":"exact"}],"termid":"MONDO:0001773","xrefs":{"Monarch":{"xref_id":"0001773"}}}


id: GO:0071106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which adenosine 3',5'-bisphosphate is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"purine-containing compound transmembrane transport","termid":"GO:0072530"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transport","termid":"GO:1901679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"adenosine 3',5'-bisphosphate transmembrane transport","synonyms":[{"name":"adenosine 3',5'-bisphosphate membrane transport","type":"exact"},{"name":"adenosine 3',5'-diphosphate transport","type":"exact"},{"name":"adenosine 3'-phosphate-5'-phosphate transmembrane transport","type":"exact"}],"termid":"GO:0071106"}


id: MONDO:0800179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection of the joint that is a complication occurring in 1% to 2% of primary arthroplasties.","definition_xrefs":["PMID:33380199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial arthritis","termid":"MONDO:0004471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periprosthetic joint infection","termid":"MONDO:0800179","xrefs":{"Monarch":{"xref_id":"0800179"}}}


id: FYPO:0003300
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of ubiquitin-dependent protein degradation via the N-end rule pathway is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteasomal ubiquitin-dependent protein degradation","termid":"FYPO:0004545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein degradation via N-end rule pathway during vegetative growth","synonyms":[{"name":"decreased protein degradation via N-end rule pathway during mitotic cell cycle","type":"related"},{"name":"decreased ubiquitin-dependent protein breakdown via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein catabolic process via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein catabolism via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"decreased ubiquitin-dependent protein degradation via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"reduced protein degradation via N-end rule pathway during vegetative growth","type":"exact"}],"termid":"FYPO:0003300"}


id: FYPO:0001289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a phospholipid measured in a cell is lower than normal. A phospholipid is any lipid containing phosphoric acid as a mono- or di-ester.","definition_xrefs":["CHEBI:16247","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered phospholipid level","termid":"FYPO:0001287"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased phospholipid level","synonyms":[{"name":"decreased cellular phospholipid level","type":"exact"},{"name":"decreased phospholipid accumulation","type":"related"},{"name":"decreased phospholipid level during mitotic cell cycle","type":"related"},{"name":"decreased phospholipid level during vegetative growth","type":"exact"},{"name":"reduced phospholipid level","type":"exact"}],"termid":"FYPO:0001289"}


id: PBO:0034642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_arsenite_ion","termid":"PBO:0034642"}


id: PBO:0117457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S43b","termid":"PBO:0117457"}


id: PBO:0055991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich transmembrane and O-methyltransferase domain containing","termid":"PBO:0055991"}


id: PBO:0073734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC1A2 antisense RNA 2","termid":"PBO:0073734"}


id: MONDO:1011546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intervertebral disc disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intervertebral disc disease, non-human animal","termid":"MONDO:1011452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intervertebral disc disease, dog","secondary_identifiers":["OMIA:000157-9615"],"termid":"MONDO:1011546","xrefs":{"Monarch":{"xref_id":"1011546"}}}


id: PBO:0004048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopeptidase Ape2 (predicted)","termid":"PBO:0004048"}


id: FYPO:0003996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA primase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal DNA primase activity","termid":"FYPO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abolished DNA primase activity","synonyms":[{"name":"DNA primase activity abolished","type":"exact"}],"termid":"FYPO:0003996"}


id: PBO:0061021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4","termid":"PBO:0061021"}


id: MONDO:0013311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectodermal dysplasia-syndactyly syndrome is a rare, genetic ectodermal dysplasia syndrome characterized by sparse to absent scalp hair, eyebrows, and eyelashes (with pili torti when present), widely spaced, conical-shaped teeth with peg-shaped, conical crowns and enamel hypoplasia and palmoplantar hyperkeratosis, associated with partial cutaneous syndactyly in hands and feet.","definition_xrefs":["Orphanet:247820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia-syndactyly syndrome","secondary_identifiers":["OMIMPS:613573","GARD:17198","MEDGEN:1648397","UMLS:C4749852"],"synonyms":[{"name":"EDSS","type":"exact"},{"name":"EDSS1","type":"exact"},{"name":"ectodermal dysplasia-syndactyly syndrome 1","type":"related"},{"name":"ectodermal dysplasia-syndactyly syndrome type 1","type":"exact"}],"termid":"MONDO:0013311","xrefs":{"Monarch":{"xref_id":"0013311"}}}


id: PBO:0047405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 43","termid":"PBO:0047405"}


id: PBO:0042467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 4 pseudogene 4","termid":"PBO:0042467"}


id: MOD:01089
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthyl","synonyms":[{"name":"Xan","type":"exact"}],"termid":"MOD:01089"}


id: PBO:0062084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 15","termid":"PBO:0062084"}


id: GO:0102873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-16:0-digalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-16:0-digalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:8066133","PMID:7948918"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-16:0-digalactosyldiacylglycerol desaturase activity (obsolete GO:0102873)","termid":"GO:0102873"}


id: FYPO:0006457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is abolished during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"},{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during meiosis I","termid":"FYPO:0006161"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during meiotic cell cycle","termid":"FYPO:0006529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to centromere central core during meiosis I","synonyms":[{"name":"abolished protein localisation to centromere central core during meiosis I","type":"exact"},{"name":"abolished protein localisation to chromatin at centromere central core during meiosis I","type":"exact"},{"name":"abolished protein localization to centromere central core during first meiotic nuclear division","type":"exact"},{"name":"abolished protein localization to chromatin at centromere central core during meiosis I","type":"exact"},{"name":"protein localization to centromere central core abolished during meiosis I","type":"exact"},{"name":"protein localization to chromatin at centromere central core abolished during meiosis I","type":"exact"}],"termid":"FYPO:0006457"}


id: FYPO:0003202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction is not spatially and temporally coupled to division septum assembly as in wild type. The edges of the growing septum and the plasma membrane do not remain in contact, and septum assembly may be slower than ring contraction.","definition_xrefs":["PomBase:mah","PMID:24165938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000032","FYPO:0001320","FYPO:0004803","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"actomyosin contractile ring contraction uncoupled from septum assembly","synonyms":[{"name":"actomyosin contractile ring contraction uncoupled from septum assembly during mitotic cell cycle","type":"related"},{"name":"actomyosin contractile ring contraction uncoupled from septum assembly during vegetative growth","type":"exact"},{"name":"cytokinetic contractile ring contraction uncoupled from septum assembly","type":"exact"}],"termid":"FYPO:0003202"}


id: GO:0010236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of plastoquinone, a lipid-soluble electron-transporting coenzyme present in the chloroplast.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quinone biosynthetic process","termid":"GO:1901663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"plastoquinone biosynthetic process","secondary_identifiers":["MetaCyc:PWY-1581"],"synonyms":[{"name":"plastoquinone anabolism","type":"exact"},{"name":"plastoquinone biosynthesis","type":"exact"},{"name":"plastoquinone formation","type":"exact"},{"name":"plastoquinone synthesis","type":"exact"}],"termid":"GO:0010236"}


id: MONDO:1010244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"L-2-hydroxyglutaricacidemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2-hydroxyglutaricacidemia, non-human animal","secondary_identifiers":["OMIA:001371"],"termid":"MONDO:1010244","xrefs":{"Monarch":{"xref_id":"1010244"}}}


id: PBO:0065165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein C, inactivator of coagulation factors Va and VIIIa","termid":"PBO:0065165"}


id: PBO:0071422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 28","termid":"PBO:0071422"}


id: FYPO:0004061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which UV-damage excision repair occurs to a lower extent than normal during G1 phase of the mitotic cell cycle. UV-damage excision repair is a DNA repair process that is initiated by an endonuclease that introduces a single-strand incision immediately 5' of a UV-induced damage site, and that acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs).","definition_xrefs":["PomBase:mah","GO:0070914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased UV-damage excision repair","termid":"FYPO:0004031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"decreased UV-damage excision repair during mitotic G1 phase","synonyms":[{"name":"decreased UV-damage excision repair during G1 phase of mitotic cell cycle","type":"related"},{"name":"decreased UV-damage excision repair during mitotic G1 during vegetative growth","type":"exact"},{"name":"reduced UV-damage excision repair during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0004061"}


id: GO:0016697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor, cytochrome as acceptor","secondary_identifiers":["GO:0016698","EC:1.12.2.-"],"termid":"GO:0016697"}


id: PR:O13652
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sfi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.05c","synonyms":[{"name":"Spom972h-sfi1","type":"exact"},{"name":"suppressor of fermentation induced loss of stress resistance protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13652"}


id: MONDO:0003228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myelodysplastic/myeloproliferative neoplasm (obsolete MONDO:0003228)","termid":"MONDO:0003228","xrefs":{"Monarch":{"xref_id":"0003228"}}}


id: MONDO:0008337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial pterygium of the conjunctiva is a rare form of pterygium, which develops in early adulthood, characterized by a wing-like bulbar thickening of the conjunctiva in the interpalpebral fissure area that can be cured by surgical excision.","definition_xrefs":["Orphanet:2989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pterygium","termid":"MONDO:0005085"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"familial pterygium of the conjunctiva","secondary_identifiers":["GARD:4569","ICD10CM:H11.0","MESH:C566740","OMIM:178000","UMLS:C4274782","MEDGEN:896736"],"synonyms":[{"name":"pterygium of conjunctiva and cornea","type":"related"},{"name":"pterygium of the conjunctiva and cornea","type":"related"}],"termid":"MONDO:0008337","xrefs":{"Monarch":{"xref_id":"0008337"}}}


id: PBO:0076046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin 1 pseudogene 1","termid":"PBO:0076046"}


id: PBO:0054332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1725","termid":"PBO:0054332"}


id: SO:0001710
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 79th residue (a lysine), from the start of the H3 histone protein is mono- methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K79_methylation_site","termid":"SO:0001735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K79_monomethylation_site","synonyms":[{"name":"H3K79 mono-methylation site","type":"exact"},{"name":"H3K79me1","type":"related"}],"termid":"SO:0001710"}


id: PR:Q10341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cys2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine-O-acetyltransferase cys2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.17c","synonyms":[{"name":"Spom972h-cys2","type":"exact"}],"termid":"PR:Q10341"}


id: GO:0097223
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a sperm, a mature male germ cell that develops from a spermatid.","definition_xrefs":["GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete sperm part (obsolete GO:0097223)","termid":"GO:0097223"}


id: PBO:0084549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the REF (RNA and export factor binding proteins) family; when overexpressed, can substitute for the function of Yra1p in export of poly(A)+ mRNA from the nucleus","termid":"PBO:0084549"}


id: PBO:0078460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable A (pseudogene)","termid":"PBO:0078460"}


id: MONDO:0014788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2W is a subtype of autosomal recessive limb girdle muscular dystrophy characterized by childhood onset of severe, progressive, proximal skeletal muscle weakness and atrophy of the upper and lower limbs with later involvement of distal muscles and development of severe quadraparesis, calf hypertrophy, triangular tongue, and dilated cardiomyopathy. Skeletal muscles undergo diffuse, bilateral, symmetric and severe atrophy with fat infiltration.","definition_xrefs":["Orphanet:466801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005267","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2W","secondary_identifiers":["GARD:17834","DOID:0110288","MEDGEN:897675","OMIM:616827","UMLS:C4225192"],"synonyms":[{"name":"LGMD2W","type":"exact"},{"name":"LIMS2 autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in LIMS2","type":"exact"},{"name":"muscular dystrophy, autosomal recessive, with cardiomyopathy and triangular tongue","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2W","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2w","type":"exact"}],"termid":"MONDO:0014788","xrefs":{"Monarch":{"xref_id":"0014788"}}}


id: PBO:0034458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_iron_assimilation_gene_mRNA_during_vegetative_growth","termid":"PBO:0034458"}


id: GO:0009798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of a pattern along a line or around a point.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axis specification","synonyms":[{"name":"axis determination","type":"related"}],"termid":"GO:0009798"}


id: GO:0031667
data:
  {"annotated_genes":["SJAG_02380","SJAG_02878","SJAG_02474","SJAG_00169","SJAG_00845","SJAG_01184","SJAG_00781","SJAG_00256","SJAG_01970","SJAG_03048","SJAG_04032","SJAG_03309","SJAG_02496","SJAG_04743","SJAG_00457","SJAG_04637","SJAG_02026","SJAG_03319","SJAG_02785","SJAG_02424","SJAG_04873","SJAG_03371","SJAG_01885","SJAG_03486","SJAG_04067","SJAG_00359","SJAG_03266","SJAG_00233","SJAG_04054","SJAG_02973","SJAG_03602","SJAG_02699","SJAG_00534","SJAG_04677","SJAG_00209","SJAG_03519","SJAG_04031","SJAG_00380","SJAG_01509","SJAG_01245","SJAG_04268"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118127,72600,94602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019676"},{"annotations":[76233,95012,74398,95558,72818,73939,72014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034198"},{"annotations":[70457,76531,98757,116870,76341,100777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042149"},{"annotations":[94433,78009,100825,94440,104126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010106"},{"annotations":[72478,107937,113723,113724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016036"},{"annotations":[77466,78749,76622,80716,71863,74966,94960,72903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009267"},{"annotations":[115975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[115134,101553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019740"},{"annotations":[101729,88170],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905287"},{"annotations":[70454],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043609"},{"annotations":[102728],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904547"},{"annotations":[70952,114214],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006808"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of nutrients.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00233":null,"SJAG_00256":null,"SJAG_00359":null,"SJAG_00380":null,"SJAG_00457":null,"SJAG_00534":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_01184":null,"SJAG_01245":null,"SJAG_01509":null,"SJAG_01885":null,"SJAG_01970":null,"SJAG_02026":null,"SJAG_02380":null,"SJAG_02424":null,"SJAG_02474":null,"SJAG_02496":null,"SJAG_02699":null,"SJAG_02785":null,"SJAG_02878":null,"SJAG_02973":null,"SJAG_03048":null,"SJAG_03266":null,"SJAG_03309":null,"SJAG_03319":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03519":null,"SJAG_03602":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04054":null,"SJAG_04067":null,"SJAG_04268":null,"SJAG_04637":null,"SJAG_04677":null,"SJAG_04743":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nutrient levels","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031667","terms_by_termid":{"GO:0006808":null,"GO:0009267":null,"GO:0010106":null,"GO:0016036":null,"GO:0019676":null,"GO:0019740":null,"GO:0031142":null,"GO:0034198":null,"GO:0042149":null,"GO:0043609":null,"GO:1904547":null,"GO:1905287":null}}


id: FYPO:0005239
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-tyrosine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular tyrosine level","synonyms":[{"name":"increased cellular L-tyrosine level","type":"exact"},{"name":"increased cellular tyrosine level during mitotic cell cycle","type":"related"},{"name":"increased cellular tyrosine level during vegetative growth","type":"exact"},{"name":"increased tyrosine accumulation","type":"related"}],"termid":"FYPO:0005239"}


id: PBO:0025502
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate carboxylase deficiency","termid":"PBO:0025502"}


id: PBO:0050525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox D13","termid":"PBO:0050525"}


id: FYPO:0005626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light during S phase of the mitotic cell cycle. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage.","definition_xrefs":["PMID:26652183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV","termid":"FYPO:0005299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000298","FYPO:0000631","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during mitotic S phase","synonyms":[{"name":"normal G2 DNA damage checkpoint during cellular response to UV during S phase of mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint activation during cellular response to UV during mitotic S phase","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to S phase exposure to UV","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during mitotic S phase during vegetative growth","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to ultraviolet light during mitotic S phase","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint response after UV irradiation during S phase","type":"exact"}],"termid":"FYPO:0005626"}


id: MONDO:1012239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central retinal degeneration, non-human animal","termid":"MONDO:1011978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central retinal degeneration, cheetah","secondary_identifiers":["OMIA:000867-32536"],"termid":"MONDO:1012239","xrefs":{"Monarch":{"xref_id":"1012239"}}}


id: FYPO:0006949
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of S-methyl-L-ergothioneine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular S-methyl-L-ergothioneine level during vegetative growth","synonyms":[{"name":"increased S-methyl-L-ergothioneine accumulation during vegetative growth","type":"related"},{"name":"increased cellular S-methyl-L-ergothioneine level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006949"}


id: GO:2001083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to alpha-D-glucan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"alpha-D-glucan binding","termid":"GO:2001083"}


id: GO:0010998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation in response to stress by the phosphorylation of eIF2 alpha.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:hjd","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylation","termid":"GO:0006468"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of translational initiation by eIF2 alpha phosphorylation","synonyms":[{"name":"eIF2 alpha phosphorylation in response to stress","type":"exact"},{"name":"regulation of translational initiation by eIF2 alpha phosphorylation in response to stress","type":"exact"}],"termid":"GO:0010998"}


id: PBO:0081448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 316","termid":"PBO:0081448"}


id: PBO:0059411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S35 pseudogene 1","termid":"PBO:0059411"}


id: PBO:0046512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich 6","termid":"PBO:0046512"}


id: PBO:0082188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alcohol dehydrogenase isoenzyme type IV; dimeric enzyme demonstrated to be zinc-dependent despite sequence similarity to iron-activated alcohol dehydrogenases; transcription is induced in response to zinc deficiency","termid":"PBO:0082188"}


id: GO:0044480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism initiates, promotes, or enhances mast cell degranulation in another organism via the action of a venom.","definition_xrefs":["GOC:fj","PMID:21549739","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of mast cell degranulation","termid":"GO:0044479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated mast cell degranulation","synonyms":[{"name":"envenomation resulting in positive regulation of mast cell degranulation in another organism","type":"exact"},{"name":"envenomation resulting in positive regulation of mast cell degranulation in other organism","type":"exact"}],"termid":"GO:0044480"}


id: GO:0005081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor signaling protein serine/threonine phosphatase signaling protein activity (obsolete GO:0005081)","synonyms":[{"name":"receptor signaling protein serine/threonine phosphatase signaling protein activity","type":"exact"},{"name":"receptor signalling protein serine/threonine phosphatase signalling protein activity","type":"exact"}],"termid":"GO:0005081"}


id: PBO:0071283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 6","termid":"PBO:0071283"}


id: PBO:0040686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS3 microtubule associated cell migration factor","termid":"PBO:0040686"}


id: PBO:0027570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_pore_distribution_during_mitosis","termid":"PBO:0027570"}


id: PBO:0053483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 458","termid":"PBO:0053483"}


id: MONDO:0100252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial tumoral calcinosis","termid":"MONDO:0018891"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"tumoral calcinosis, hyperphosphatemic, familial, 1","secondary_identifiers":["MEDGEN:1642611","OMIM:211900","UMLS:C4692564","GARD:15146"],"synonyms":[{"name":"HFTC","type":"broad"},{"name":"HFTC1","type":"exact"},{"name":"Morbus Teutschlaender","type":"exact"},{"name":"Teutschlaender disease, familial","type":"exact"},{"name":"calcinosis, tumoral, with hyperphosphatemia","type":"exact"},{"name":"hyperostosis-hyperphosphatemia syndrome","type":"exact"},{"name":"tumoral calcinosis, HYPERPHOSPHATEMIC, familial, 1","type":"exact"},{"name":"tumoral calcinosis, Hyperphosphatemic, familial, 1","type":"exact"},{"name":"tumoral calcinosis, hyperphosphatemic, familial","type":"exact"},{"name":"tumoral calcinosis, hyperphosphatemic, familial, 1","type":"exact"},{"name":"tumoral calcinosis, primary Hyperphosphatemic","type":"exact"}],"termid":"MONDO:0100252","xrefs":{"Monarch":{"xref_id":"0100252"}}}


id: PBO:0048515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP dissociation inhibitor 2 pseudogene 2","termid":"PBO:0048515"}


id: GO:0032389
data:
  {"annotated_genes":["SJAG_01620","SJAG_02187"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71097,71982],"is_not":false,"summary":null,"term":"GO:0032389"}]},"cv_name":"cellular_component","definition":"A heterodimer involved in the recognition of base-base and small insertion/deletion mismatches. In human the complex consists of two subunits, MLH1 and PMS2.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01620":null,"SJAG_02187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"MutLalpha complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"MLH1/PMS2 complex","type":"exact"},{"name":"MMR complex","type":"broad"},{"name":"MutL-alpha complex","type":"exact"}],"termid":"GO:0032389","terms_by_termid":{"GO:0032389":null}}


id: PBO:0083098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent ATPase; DNA recombination/repair translocase, supercoils DNA, promotes DNA strand opening; stimulates strand exchange by modifying dsDNA topology; involved in recombinational repair of DNA double-strand breaks (DSBs) during mitosis, meiosis; implicated in cell divisions in telomerase-negative strains through adaptation to DNA damage, which allows bypass of cell cycle arrest and contributes senescence-specific genome instability; phosphorylated in response to DNA damage","termid":"PBO:0083098"}


id: MONDO:0002896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The subclinical or symptomatic stage of syphilis, occurring at an average of three weeks after contact with an infected individual. It manifests with one or more painless, indurated ulcers (chancres) of the skin or mucous membranes at the site of inoculation. These lesions heal spontaneously within a few weeks.","definition_xrefs":["NCIT:C128412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syphilis","termid":"MONDO:0005976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary syphilis","secondary_identifiers":["SCTID:186846005","ICD9:091","DOID:4156","MESH:C536772","MEDGEN:419772","UMLS:C2931317"],"synonyms":[{"name":"early symptomatic syphilis","type":"exact"},{"name":"early syphilis, symptomatic","type":"exact"},{"name":"symptomatic early syphilis","type":"exact"}],"termid":"MONDO:0002896","xrefs":{"Monarch":{"xref_id":"0002896"}}}


id: PBO:0000261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family","termid":"PBO:0000261"}


id: GO:0031906
data:
  {"annotated_genes":["SJAG_02432"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97965],"is_not":false,"summary":null,"term":"GO:0031906"}]},"cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a late endosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome lumen","termid":"GO:0031904"},{"relation_name":"part_of","term_name":"late endosome","termid":"GO:0005770"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005768","GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"late endosome lumen","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031906","terms_by_termid":{"GO:0031906":null}}


id: PBO:0028426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sodium_fluoride","termid":"PBO:0028426"}


id: PBO:0053321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 106","termid":"PBO:0053321"}


id: GO:0061912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The macroautophagy process in which specific structures are targeted by the autophagy process.","definition_xrefs":["PMID:21997368","PMID:22966490","PMID:20484971"],"gene_count":0,"genotype_count":0,"name":"obsolete selective autophagy (obsolete GO:0061912)","termid":"GO:0061912"}


id: MONDO:0850106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"non-specific autoimmune brainstem encephalitis without characteristic antibodies","secondary_identifiers":["UMLS:C5680407","MEDGEN:1843231","Orphanet:624216","GARD:22501"],"termid":"MONDO:0850106","xrefs":{"Monarch":{"xref_id":"0850106"}}}


id: PBO:0041413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 7 open reading frame 31","termid":"PBO:0041413"}


id: GO:0106187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons linked to an oxidoreduction reaction.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on hydrons linked to oxidoreductase reactions (obsolete GO:0106187)","termid":"GO:0106187"}


id: PBO:0112232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome-associated ubiquitin receptor, S. cerevisiae Rad23 homolog, Rhp23","termid":"PBO:0112232"}


id: GO:0004421
data:
  {"annotated_genes":["SJAG_04499"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80283],"is_not":false,"summary":null,"term":"GO:0004421"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetyl-CoA + acetyl-CoA + H2O = (S)-3-hydroxy-3-methylglutaryl-CoA + CoA + H+.","definition_xrefs":["RHEA:10188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04499":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-191323","Reactome:R-HSA-73918","EC:2.3.3.10","MetaCyc:HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN","KEGG_REACTION:R01978"],"synonyms":[{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA acetoacetyl-CoA-lyase (CoA-acetylating)","type":"related"},{"name":"(s)-3-hydroxy-3-methylglutaryl-CoA acetoacetyl-CoA-lyase (CoA- acetylating) activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl CoA synthetase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl coenzyme A synthase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl coenzyme A synthetase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-CoA synthase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-coenzyme A synthase activity","type":"related"},{"name":"HMG-CoA synthase activity","type":"related"},{"name":"acetoacetyl coenzyme A transacetase activity","type":"related"},{"name":"acetyl-CoA:acetoacetyl-CoA C-acetyltransferase (thioester-hydrolysing, carboxymethyl-forming)","type":"related"},{"name":"beta-hydroxy-beta-methylglutaryl-CoA synthase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A synthase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A-condensing enzyme","type":"related"},{"name":"hydroxymethylglutaryl coenzyme alpha-condensing enzyme activity","type":"related"}],"termid":"GO:0004421","terms_by_termid":{"GO:0004421":null}}


id: GO:0035116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the hindlimbs are generated and organized. The hindlimbs are the posterior limbs of an animal.","definition_xrefs":["ISBN:0198612001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic limb morphogenesis","termid":"GO:0030326"},{"relation_name":"is_a","term_name":"hindlimb morphogenesis","termid":"GO:0035137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic hindlimb morphogenesis","termid":"GO:0035116"}


id: PBO:0047277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group D2","termid":"PBO:0047277"}


id: GO:0043600
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multi-component enzymatic machine at the cytoplasmic replication fork, which mediates DNA replication. Includes DNA primase, DNA polymerase, DNA helicase, and other proteins.","definition_xrefs":["GOC:mtg_sensu","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replisome","termid":"GO:0030894"},{"relation_name":"part_of","term_name":"cytoplasmic replication fork","termid":"GO:0043597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cytoplasmic replisome","synonyms":[{"name":"prokaryotic replisome","type":"exact"}],"termid":"GO:0043600"}


id: GO:0017162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an aryl hydrocarbon receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"aryl hydrocarbon receptor binding","termid":"GO:0017162"}


id: GO:0046425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor signaling via JAK-STAT.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor signaling pathway via STAT","termid":"GO:1904892"},{"relation_name":"regulates","term_name":"cell surface receptor signaling pathway via JAK-STAT","termid":"GO:0007259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor signaling pathway via JAK-STAT","secondary_identifiers":["GO:0007262","GO:2000364"],"synonyms":[{"name":"STAT protein import into nucleus","type":"narrow"},{"name":"regulation of STAT protein import into nucleus","type":"narrow"},{"name":"regulation of STAT protein nuclear translocation","type":"narrow"}],"termid":"GO:0046425"}


id: PBO:0001259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex subunit Snt2","termid":"PBO:0001259"}


id: GO:0018687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biphenyl + NADH + H+ + O2 = (2R,3S)-3-phenylcyclohexa-3,5-diene-1,2-diol + NAD+. This reaction requires Fe2+.","definition_xrefs":["EC:1.14.12.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"biphenyl 2,3-dioxygenase activity","secondary_identifiers":["MetaCyc:1.14.12.18-RXN","RHEA:18165","UM-BBD_enzymeID:r0388"],"synonyms":[{"name":"biphenyl dioxygenase activity","type":"related"},{"name":"biphenyl,NADH:oxygen oxidoreductase (2,3-hydroxylating)","type":"related"}],"termid":"GO:0018687"}


id: GO:2000597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of optic nerve formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of optic nerve formation","termid":"GO:2000595"},{"relation_name":"positively_regulates","term_name":"optic nerve formation","termid":"GO:0021634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of optic nerve formation","synonyms":[{"name":"positive regulation of CN II biosynthesis","type":"related"},{"name":"positive regulation of CN II formation","type":"related"}],"termid":"GO:2000597"}


id: MONDO:0000899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant epithelioid hemangioendothelioma (obsolete MONDO:0000899)","termid":"MONDO:0000899","xrefs":{"Monarch":{"xref_id":"0000899"}}}


id: GO:0046183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-idonate, the anion of idonic acid, an aldonic acid derived from L-idose, an aldohexose which is epimeric with D-glucose.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"L-idonate metabolic process","termid":"GO:0019523"},{"relation_name":"is_a","term_name":"aldonic acid catabolic process","termid":"GO:0046176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"L-idonate catabolic process","synonyms":[{"name":"L-idonate breakdown","type":"exact"},{"name":"L-idonate catabolism","type":"exact"},{"name":"L-idonate degradation","type":"exact"}],"termid":"GO:0046183"}


id: SO:0000031
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA or RNA molecules that have been selected from random pools based on their ability to bind other molecules.","direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aptamer","secondary_identifiers":["http://en.wikipedia.org/wiki/Aptamer"],"termid":"SO:0000031"}


id: PBO:0067641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 814, pseudogene","termid":"PBO:0067641"}


id: MONDO:0021329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the soft palate. The majority are squamous cell carcinomas.","definition_xrefs":["NCIT:C8395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft palate cancer","termid":"MONDO:0004611"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"},{"relation_name":"is_a","term_name":"oropharyngeal carcinoma","termid":"MONDO:0044926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma of soft palate","secondary_identifiers":["SCTID:254435009","MEDGEN:87505","UMLS:C0345555"],"synonyms":[{"name":"carcinoma of soft palate","type":"exact"},{"name":"carcinoma of the soft palate","type":"exact"},{"name":"soft palate cancer","type":"broad"},{"name":"soft palate carcinoma","type":"exact"}],"termid":"MONDO:0021329","xrefs":{"Monarch":{"xref_id":"0021329"}}}


id: PBO:0069367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 627, pseudogene","termid":"PBO:0069367"}


id: GO:1902154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to DNA damage checkpoint signaling.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to DNA integrity checkpoint signaling","termid":"GO:1902152"},{"relation_name":"is_a","term_name":"regulation of response to DNA damage checkpoint signaling","termid":"GO:1902153"},{"relation_name":"positively_regulates","term_name":"response to DNA damage checkpoint signaling","termid":"GO:0072423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to DNA damage checkpoint signaling","synonyms":[{"name":"activation of DNA damage checkpoint effector process","type":"exact"},{"name":"activation of response to DNA damage checkpoint signaling","type":"narrow"},{"name":"activation of response to signal involved in DNA damage checkpoint","type":"exact"},{"name":"positive regulation of DNA damage checkpoint effector process","type":"exact"},{"name":"positive regulation of response to signal involved in DNA damage checkpoint","type":"exact"},{"name":"up regulation of DNA damage checkpoint effector process","type":"exact"},{"name":"up regulation of response to DNA damage checkpoint signaling","type":"exact"},{"name":"up regulation of response to signal involved in DNA damage checkpoint","type":"exact"},{"name":"up-regulation of DNA damage checkpoint effector process","type":"exact"},{"name":"up-regulation of response to DNA damage checkpoint signaling","type":"exact"},{"name":"up-regulation of response to signal involved in DNA damage checkpoint","type":"exact"},{"name":"upregulation of DNA damage checkpoint effector process","type":"exact"},{"name":"upregulation of response to DNA damage checkpoint signaling","type":"exact"},{"name":"upregulation of response to signal involved in DNA damage checkpoint","type":"exact"}],"termid":"GO:1902154"}


