# terms

id: PBO:0055661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lincRNA adipogenesis and lipogenesis associated","termid":"PBO:0055661"}


id: PBO:0066206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 20","termid":"PBO:0066206"}


id: GO:0018141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl lysine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0245"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-lysine thiazolecarboxylic acid (obsolete GO:0018141)","termid":"GO:0018141"}


id: PBO:0074786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 7","termid":"PBO:0074786"}


id: GO:0019286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycine betaine from other compounds, including glycine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine metabolic process","termid":"GO:0006544"},{"relation_name":"is_a","term_name":"glycine betaine biosynthetic process","termid":"GO:0031456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycine betaine biosynthetic process from glycine","secondary_identifiers":["MetaCyc:P541-PWY"],"synonyms":[{"name":"N-trimethylglycine biosynthesis from glycine","type":"exact"},{"name":"N-trimethylglycine biosynthetic process from glycine","type":"exact"},{"name":"glycine betaine anabolism from glycine","type":"exact"},{"name":"glycine betaine formation from glycine","type":"exact"},{"name":"glycine betaine synthesis from glycine","type":"exact"}],"termid":"GO:0019286"}


id: PBO:0110368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 signaling adaptor L2","termid":"PBO:0110368"}


id: PBO:0069752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1035, pseudogene","termid":"PBO:0069752"}


id: MONDO:0030334
data:
  {"annotated_genes":["SJAG_01433"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87660],"is_not":false,"summary":null,"term":"MONDO:0030334"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis, acute, infection-induced, susceptibility to","termid":"MONDO:0800174"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01433":null},"genotype_count":0,"is_obsolete":false,"name":"encephalitis, acute, infection (viral)-induced, susceptibility to, 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619441","UMLS:C5561941","MEDGEN:1794151"],"synonyms":[{"name":"IIAE11","type":"exact"},{"name":"encephalitis, acute, infection (viral)-induced, susceptibility to, 11","type":"exact"}],"termid":"MONDO:0030334","terms_by_termid":{"MONDO:0030334":null},"xrefs":{"Monarch":{"xref_id":"0030334"}}}


id: PBO:0077625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 15C","termid":"PBO:0077625"}


id: PBO:0116974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADORA1 antisense RNA 2","termid":"PBO:0116974"}


id: MONDO:1010565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"diabetes insipidus, non-human animal","termid":"MONDO:1010051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes insipidus, chicken","secondary_identifiers":["OMIA:000278-9031"],"termid":"MONDO:1010565","xrefs":{"Monarch":{"xref_id":"1010565"}}}


id: PR:Q09195
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A delta(14)-sterol reductase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04051","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta(14)-sterol reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.18","secondary_identifiers":["UniProtKB:Q09195"],"synonyms":[{"name":"C-14 sterol reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TM7SF2","type":"exact"},{"name":"sterol C14-reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09195"}


id: FYPO:0005418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a gene product (usually a protein) that normally has ATPase activator activity has no activity in a mutant. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished ATPase activator activity","synonyms":[{"name":"ATPase activator activity abolished","type":"exact"}],"termid":"FYPO:0005418"}


id: GO:0072421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about damage to DNA is received and converted into a molecular signal, contributing to a DNA damage checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of DNA damage stimulus involved in DNA damage checkpoint (obsolete GO:0072421)","synonyms":[{"name":"DNA damage checkpoint sensor mechanism","type":"related"},{"name":"DNA damage checkpoint sensor process","type":"related"},{"name":"sensing involved in DNA damage checkpoint","type":"related"}],"termid":"GO:0072421"}


id: PBO:0085638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in inserting tail-anchored proteins into ER membranes; forms a complex with Get4p; required for efficient mating; involved in shmoo formation and nuclear migration in the pre-zygote; associates with ribosomes","termid":"PBO:0085638"}


id: PBO:0060097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 44","termid":"PBO:0060097"}


id: GO:1905599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of low-density lipoprotein receptor activity.","definition_xrefs":["GOC:nc","PMID:22848640","GOC:BHF","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of low-density lipoprotein receptor activity (obsolete GO:1905599)","synonyms":[{"name":"activation of LDL receptor","type":"narrow"},{"name":"activation of LDLR activity","type":"narrow"},{"name":"activation of low-density lipoprotein receptor activity","type":"narrow"},{"name":"positive regulation of LDL receptor","type":"exact"},{"name":"positive regulation of LDLR activity","type":"exact"},{"name":"up regulation of LDL receptor","type":"exact"},{"name":"up regulation of LDLR activity","type":"exact"},{"name":"up regulation of low-density lipoprotein receptor activity","type":"exact"},{"name":"up-regulation of LDL receptor","type":"exact"},{"name":"up-regulation of LDLR activity","type":"exact"},{"name":"up-regulation of low-density lipoprotein receptor activity","type":"exact"},{"name":"upregulation of LDL receptor","type":"exact"},{"name":"upregulation of LDLR activity","type":"exact"},{"name":"upregulation of low-density lipoprotein receptor activity","type":"exact"}],"termid":"GO:1905599"}


id: GO:0022840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transport of a solute across a membrane via a narrow pore channel that is open even in an unstimulated or 'resting' state.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narrow pore channel activity","termid":"GO:0022842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"leak channel activity","termid":"GO:0022840"}


id: PBO:0039951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ariadne RBR E3 ubiquitin protein ligase 2 pseudogene 1","termid":"PBO:0039951"}


id: MONDO:0005568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blocking of a blood vessel by cholesterol-rich atheromatous deposits, generally occurring in the flow from a large artery to small arterial branches. It is also called arterial-arterial embolization or atheroembolism which may be spontaneous or iatrogenic. Patients with spontaneous atheroembolism often have painful, cyanotic digits of acute onset.","definition_xrefs":["MESH:D017700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholesterol embolism","secondary_identifiers":["UMLS:C0149649","MEDGEN:57437","EFO:0005801","ICD9:445","DOID:1461","ICD9:459.89","SCTID:307406004"],"synonyms":[{"name":"atheroembolism","type":"exact"},{"name":"cholesterol crystal embolism","type":"exact"},{"name":"purple toe syndrome","type":"narrow"},{"name":"trash foot","type":"narrow"},{"name":"warfarin blue toe syndrome","type":"narrow"}],"termid":"MONDO:0005568","xrefs":{"Monarch":{"xref_id":"0005568"}}}


id: PBO:0005013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Alg11","termid":"PBO:0005013"}


id: FYPO:0007823
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119602,119601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007824"}]},"cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which any aspect of quorum sensing is abnormal.","definition_xrefs":["GO:0009372","PMID:31150379","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal quorum sensing","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_02592"],"single_locus_genotype_uniquenames":["atf1delta","sty1delta"],"termid":"FYPO:0007823","terms_by_termid":{"FYECO:0000314":null,"FYPO:0007824":null}}


id: GO:0141199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of GDP-mannose from glucose.","definition_xrefs":["PMID:9287314","PMID:21273394"],"gene_count":0,"genotype_count":0,"name":"obsolete GDP-mannose biosynthetic process from glucose (obsolete GO:0141199)","termid":"GO:0141199"}


id: GO:0018125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of peptidyl-cysteine to form peptidyl-S-methyl-L-cysteine.","definition_xrefs":["RESID:AA0234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"},{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-cysteine methylation","termid":"GO:0018125"}


id: PBO:0062954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 like","termid":"PBO:0062954"}


id: PR:000050543
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein gtr1 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PMID:33534698","PPRO:DAN","PMID:27227887","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"GTP-binding protein gtr1 (Schizosaccharomyces pombe)","termid":"PR:000050541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gtr1/GTP+","pombase_gene_id":"SPBC337.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein gtr1, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-gtr1/GTP+","type":"exact"},{"name":"gtr1/GTP+","type":"exact"},{"name":"Gtr1/GTP+","type":"exact"}],"termid":"PR:000050543"}


id: PBO:0065965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 associated protein 1","termid":"PBO:0065965"}


id: GO:0034462
data:
  {"annotated_genes":["SJAG_04524","SJAG_01169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73357,113453],"is_not":false,"summary":null,"term":"GO:0034462"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a small-subunit processome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"cytosolic small ribosomal subunit assembly","termid":"GO:0180025"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01169":null,"SJAG_04524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"small-subunit processome assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SSU processome assembly","type":"exact"},{"name":"small subunit processome assembly","type":"exact"}],"termid":"GO:0034462","terms_by_termid":{"GO:0034462":null}}


id: GO:0008417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a fucosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"fucosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9033949","Reactome:R-HSA-9846332"],"termid":"GO:0008417"}


id: FYPO:0001216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the assembly of a SAGA complex onto chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal SAGA complex assembly","synonyms":[{"name":"normal SAGA complex assembly during mitotic cell cycle","type":"related"},{"name":"normal SAGA complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0001216"}


id: SO:1000134
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000134 sequence_variant_causing_polypeptide_fusion (obsolete SO:1000134)","synonyms":[{"name":"mutation causing polypeptide fusion","type":"related"},{"name":"sequence variant causing polypeptide fusion","type":"exact"}],"termid":"SO:1000134"}


id: PBO:0091333
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by N. crassa Pzl1","termid":"PBO:0091333"}


id: MONDO:0018001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverse Klippel-Trenaunay syndrome","secondary_identifiers":["Orphanet:329324","GARD:21488","MEDGEN:1830088","UMLS:C5679859"],"synonyms":[{"name":"cutaneous hemangioma with muscle or bone atrophy","type":"exact"},{"name":"inverse Klippel-Trénaunay syndrome","type":"related"}],"termid":"MONDO:0018001","xrefs":{"Monarch":{"xref_id":"0018001"}}}


id: FYPO:0001238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing staurosporine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on staurosporine","synonyms":[{"name":"normal cell population growth in presence of staurosporine","type":"exact"},{"name":"normal cell population growth on staurosporine","type":"exact"},{"name":"normal cellular response to staurosporine","type":"related"},{"name":"normal vegetative cell population growth on staurosporine","type":"exact"}],"termid":"FYPO:0001238"}


id: PBO:0005210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase Lig4","termid":"PBO:0005210"}


id: GO:0034464
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ciliary protein complex involved in cilium biogenesis. It consists of at least seven Bardet-Biedl syndrome (BBS) proteins and BBIP10. It moves in association with IFT trains through cilia (likely as an IFT-A/B adaptor or cargo), and is required for the integrity of IFT-A and IFT-B.","definition_xrefs":["PMID:26498262","PMID:15231740","GOC:BHF","GOC:cilia","PMID:17574030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BBSome","synonyms":[{"name":"Bardet-Biedl syndrome complex","type":"exact"}],"termid":"GO:0034464"}


id: SO:0000865
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that contains a mutation involving the deletion or insertion of one or more bases, where this number is not divisible by 3.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_attribute","termid":"SO:0000863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift","secondary_identifiers":["http://en.wikipedia.org/wiki/Frameshift"],"termid":"SO:0000865"}


id: GO:0045457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of ecdysteroids, a group of polyhydroxylated ketosteroids which initiate post-embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"ecdysteroid secretion","termid":"GO:0045457"}


id: GO:0010514
data:
  {"annotated_genes":["SJAG_00210","SJAG_03501","SJAG_01113","SJAG_04026","SJAG_02723","SJAG_01254","SJAG_02066","SJAG_03802","SJAG_02592","SJAG_01084","SJAG_03346","SJAG_03067","SJAG_03309","SJAG_02773","SJAG_03081","SJAG_04312","SJAG_02730","SJAG_04813","SJAG_06638","SJAG_00600","SJAG_02444","SJAG_00781","SJAG_01311","SJAG_05153","SJAG_02785","SJAG_04009","SJAG_01699","SJAG_00472","SJAG_02266","SJAG_01718","SJAG_03486","SJAG_00526","SJAG_00975","SJAG_00256","SJAG_04206","SJAG_03735","SJAG_02472"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88348,89535,106638,116530,116871,118630],"is_not":false,"summary":null,"term":"GO:0010514"},{"annotations":[98746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031141"},{"annotations":[115975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[106266,104847,91736,106861,107015,115922,94700,93257,107211,109382,102189,100880,88525,94558,114855,106168,116458],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0010515"},{"annotations":[103706,101730,109174,99834,100837,88171,104788,108942,119493,107416,116664,119492],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900237"}]},"cv_name":"biological_process","definition":"The process in which a cell initiates conjugation with cellular fusion. Conjugation with cellular fusion is the process that results in the union of cellular and genetic information from compatible mating types.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of conjugation with cellular fusion","termid":"GO:0031139"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00210":null,"SJAG_00256":null,"SJAG_00472":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00781":null,"SJAG_00975":null,"SJAG_01084":null,"SJAG_01113":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01699":null,"SJAG_01718":null,"SJAG_02066":null,"SJAG_02266":null,"SJAG_02444":null,"SJAG_02472":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02785":null,"SJAG_03067":null,"SJAG_03081":null,"SJAG_03309":null,"SJAG_03346":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03735":null,"SJAG_03802":null,"SJAG_04009":null,"SJAG_04026":null,"SJAG_04206":null,"SJAG_04312":null,"SJAG_04813":null,"SJAG_05153":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"induction of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010514","terms_by_termid":{"GO:0010514":null,"GO:0010515":null,"GO:0031141":null,"GO:0031142":null,"GO:1900237":null}}


id: FYPO:0007720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of SMN complex assembly is decreased.","definition_xrefs":["PMID:33754639","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal SMN complex assembly","termid":"FYPO:0007718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased SMN complex assembly","synonyms":[{"name":"decreased SMN complex assembly during mitotic cell cycle","type":"related"},{"name":"decreased SMN complex assembly during vegetative growth","type":"exact"},{"name":"reduced SMN complex assembly","type":"exact"}],"termid":"FYPO:0007720"}


id: GO:0021911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the synthesis and degradation of retionic acid that results in the spatial identity of regions along the anterior-posterior axis of the spinal cord.","definition_xrefs":["GOC:jid","GOC:dph","GO_REF:0000021","PMID:11262869","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoic acid metabolic process","termid":"GO:0042573"},{"relation_name":"part_of","term_name":"spinal cord anterior/posterior patterning","termid":"GO:0021512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"retinoic acid metabolic process in spinal cord anterior-posterior patterning","synonyms":[{"name":"retinoic acid metabolism in spinal cord anterior-posterior patterning","type":"exact"}],"termid":"GO:0021911"}


id: PBO:0001708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two-component GAP Cdc16","termid":"PBO:0001708"}


id: MONDO:0013180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma-related traits, susceptibility to, 8","secondary_identifiers":["UMLS:C2750782","OMIM:613207","MEDGEN:442562"],"synonyms":[{"name":"ASRT8","type":"related"},{"name":"Rhinoconjunctivitis, susceptibility to","type":"related"},{"name":"asthma-RELATED traits, susceptibility to, 8","type":"related"},{"name":"asthma-related traits, susceptibility to, 8","type":"exact"}],"termid":"MONDO:0013180","xrefs":{"Monarch":{"xref_id":"0013180"}}}


id: PBO:0003703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Asparagine","termid":"PBO:0003703"}


id: PR:O74304
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- win1 gene.","definition_xrefs":["UniProtKB:O74304","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase win1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.09","synonyms":[{"name":"Spom972h-win1","type":"exact"}],"termid":"PR:O74304"}


id: GO:1901369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyclic 2,3-bisphospho-D-glyceric acid.","definition_xrefs":["GOC:TermGenie","PMID:2226838","GOC:bf","GOC:crds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"cyclic 2,3-bisphospho-D-glycerate biosynthetic process","synonyms":[{"name":"cDPG biosynthesis","type":"exact"},{"name":"cyclic 2,3-bisphospho-D-glyceric acid anabolism","type":"exact"},{"name":"cyclic 2,3-bisphospho-D-glyceric acid biosynthesis","type":"exact"},{"name":"cyclic 2,3-bisphospho-D-glyceric acid biosynthetic process","type":"exact"},{"name":"cyclic 2,3-bisphospho-D-glyceric acid formation","type":"exact"},{"name":"cyclic 2,3-bisphospho-D-glyceric acid synthesis","type":"exact"},{"name":"cyclic 2,3-diphosphoglycerate biosynthesis","type":"exact"}],"termid":"GO:1901369"}


id: GO:1905571
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-10 (IL-10) and that consists of, at a minimum, a dimeric interleukin, an alpha and a beta chain as well as optional additional kinase subunits. The alpha chain binds IL-10 with high affinity and subsequently binds the common beta receptor chain that forms part of multiple interleukin receptors.","definition_xrefs":["GO_REF:0000088","GOC:bhm","GOC:TermGenie","PMID:16982608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interleukin-10 receptor complex","synonyms":[{"name":"IL-10 receptor complex","type":"exact"},{"name":"IL-10-receptor complex","type":"exact"},{"name":"IL10 receptor complex","type":"exact"},{"name":"interleukin-10-receptor complex","type":"exact"}],"termid":"GO:1905571"}


id: GO:0170063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a solute from the lysosomal lumen across the lysosomal membrane and into the cytosol.","definition_xrefs":["PMID:26631267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"transmembrane transport from lysosomal lumen to cytosol","termid":"GO:0170063"}


id: PBO:0054175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1548","termid":"PBO:0054175"}


id: GO:0102277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucosaminyl-(1->4)-N-acetyl-D-glucosamine + H2O = D-glucosamine + N-acetyl-D-glucosamine.","definition_xrefs":["RHEA:62164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-acetamido-4-O-(2-amino-2-deoxy-beta-D-glucopyranosyl)-2-deoxy-D-glucose exo-beta-D-glucosaminidase activity","secondary_identifiers":["MetaCyc:RXN-12544"],"termid":"GO:0102277"}


id: GO:0042613
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen.","definition_xrefs":["GOC:add","ISBN:0120781859","GOC:jl","PMID:15928678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex","termid":"GO:0042611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MHC class II protein complex","termid":"GO:0042613"}


id: PR:Q7LL04
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1494.01 gene.","definition_xrefs":["UniProtKB:Q7LL04","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0676 protein C1494.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.01","synonyms":[{"name":"Spom972h-SPCC1494.01","type":"exact"}],"termid":"PR:Q7LL04"}


id: FYPO:0007447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which autophagic degradation of the endoplasmic reticulum does not occur during a cellular response to endoplasmic reticulum stress.","definition_xrefs":["PMID:32735772","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished macroautophagy","termid":"FYPO:0000380"},{"relation_name":"is_a","term_name":"abnormal reticulophagy during vegetative growth","termid":"FYPO:0007445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished reticulophagy during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"abolished ER autophagy during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"abolished ER degradation","type":"related"},{"name":"abolished ER-phagy during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"abolished endoplasmic reticulum autophagy during cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"abolished reticulophagy during cellular response to ER stress","type":"exact"},{"name":"abolished reticulophagy during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"abolished reticulophagy during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"},{"name":"reticulophagy abolished during cellular response to endoplasmic reticulum stress","type":"exact"}],"termid":"FYPO:0007447"}


id: PR:Q10412
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsc58 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit rsc58 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.07c","synonyms":[{"name":"RSC complex subunit rsc58 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rsc58","type":"exact"}],"termid":"PR:Q10412"}


id: GO:0072525
data:
  {"annotated_genes":["SJAG_04693","SJAG_03298","SJAG_01383","SJAG_00691","SJAG_04467","SJAG_03096","SJAG_00252","SJAG_01543","SJAG_01582","SJAG_01566","SJAG_00957","SJAG_01881","SJAG_03946","SJAG_00283","SJAG_00707","SJAG_01500","SJAG_02618","SJAG_02889"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[75101,113471,77795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[80267,99675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[71476,80189,78283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[70214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[89344,90976,109986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"},{"annotations":[70215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[75574,78481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[114779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[64289,75839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[112202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[75842,64287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyridine-containing compound, i.e. any compound that contains pyridine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00283":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_00957":null,"SJAG_01383":null,"SJAG_01500":null,"SJAG_01543":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_01881":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03096":null,"SJAG_03298":null,"SJAG_03946":null,"SJAG_04467":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyridine-containing compound biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyridine and derivative biosynthetic process","type":"exact"},{"name":"pyridine-containing compound anabolism","type":"exact"},{"name":"pyridine-containing compound biosynthesis","type":"exact"},{"name":"pyridine-containing compound formation","type":"exact"},{"name":"pyridine-containing compound synthesis","type":"exact"}],"termid":"GO:0072525","terms_by_termid":{"GO:0006741":null,"GO:0008615":null,"GO:0009435":null,"GO:0009443":null,"GO:0010144":null,"GO:0019358":null,"GO:0034355":null,"GO:0036001":null,"GO:0042821":null,"GO:0042823":null,"GO:0071590":null,"GO:0071592":null}}


id: MONDO:0035555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial atrioventricular septal defect with ventricular hypoplasia (obsolete MONDO:0035555)","secondary_identifiers":["Orphanet:576232"],"termid":"MONDO:0035555","xrefs":{"Monarch":{"xref_id":"0035555"}}}


id: MONDO:0017293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete small cell carcinoma of the bladder (obsolete MONDO:0017293)","termid":"MONDO:0017293","xrefs":{"Monarch":{"xref_id":"0017293"}}}


id: PBO:0053988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1305","termid":"PBO:0053988"}


id: MONDO:1010656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycythemia, non-human animal","termid":"MONDO:1010078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycythemia, cattle","secondary_identifiers":["OMIA:000809-9913"],"termid":"MONDO:1010656","xrefs":{"Monarch":{"xref_id":"1010656"}}}


id: GO:0046899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + AMP = nucleoside diphosphate + ADP.","definition_xrefs":["EC:2.7.4.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"nucleoside triphosphate adenylate kinase activity","secondary_identifiers":["Reactome:R-HSA-1008248","MetaCyc:2.7.4.10-RXN","RHEA:13749"],"synonyms":[{"name":"GTP:AMP phosphotransferase","type":"narrow"},{"name":"guanosine triphosphate-adenylate kinase","type":"narrow"},{"name":"isozyme 3 of adenylate kinase activity","type":"related"},{"name":"nucleoside triphosphate-adenosine monophosphate transphosphorylase activity","type":"exact"},{"name":"nucleoside-triphosphate-adenylate kinase activity","type":"exact"},{"name":"nucleoside-triphosphate:AMP phosphotransferase activity","type":"related"}],"termid":"GO:0046899"}


id: PBO:0053410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 347","termid":"PBO:0053410"}


id: GO:0036093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of germ cells, reproductive cells in multicellular organisms, resulting in the expansion of a cell population.","definition_xrefs":["CL:0000586","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ cell proliferation","termid":"GO:0036093"}


id: GO:0052769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the glycosidic cleavage of the terminal 2-acetamido-2-deoxy-beta-D-glucopyranoside 6-sulfate (6-SO3-GlcNAc) residue from sulfomucin, a sulfated mucin derivative.","definition_xrefs":["GOC:mengo_curators","PMID:15716424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"beta-6-sulfate-N-acetylglucosaminidase activity","synonyms":[{"name":"beta-6-SO3-N-acetylglucosaminidase activity","type":"broad"},{"name":"exosulfoglycosidase activity","type":"broad"},{"name":"sulfoglycosidase activity","type":"broad"},{"name":"sulfomucin beta-6-sulfate-N-acetylglucosaminidase activity","type":"exact"}],"termid":"GO:0052769"}


id: PBO:0029382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_nicotinamide","termid":"PBO:0029382"}


id: FYPO:0002619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing sodium butyrate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on sodium butyrate","synonyms":[{"name":"normal cell population growth in presence of sodium butyrate","type":"exact"},{"name":"normal cell population growth on sodium butyrate","type":"exact"},{"name":"normal cellular response to sodium butyrate","type":"related"},{"name":"normal vegetative cell population growth on sodium butyrate","type":"exact"}],"termid":"FYPO:0002619"}


id: PBO:0067934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 236","termid":"PBO:0067934"}


id: GO:0031724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CXCR5 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CXCR chemokine receptor binding","termid":"GO:0045236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"CXCR5 chemokine receptor binding","synonyms":[{"name":"CXCR5 chemokine receptor ligand","type":"narrow"},{"name":"type 1 Burkitt's lymphoma receptor binding","type":"exact"}],"termid":"GO:0031724"}


id: MONDO:0006758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mycobacterium infections of the female reproductive tract (genitalia, female).","definition_xrefs":["MESH:D014384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female genital tuberculosis","secondary_identifiers":["EFO:1000935","MEDGEN:21724","SCTID:74181004","UMLS:C0041311","MedDRA:10061150"],"termid":"MONDO:0006758","xrefs":{"Monarch":{"xref_id":"0006758"}}}


id: PBO:0064785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1F","termid":"PBO:0064785"}


id: MONDO:0001405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatophytosis involving the stratum corneum of the skin of the groin and perianal area.","definition_xrefs":["NCIT:C34535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermatophytosis of groin and perianal area","secondary_identifiers":["ICD9:110.3","SCTID:399029005","MEDGEN:3769","DOID:11917","UMLS:C0011638"],"synonyms":[{"name":"Dhobie itch","type":"exact"},{"name":"dermatophytosis of groin & perianal area","type":"exact"},{"name":"dermatophytosis of groin and perianal area","type":"exact"},{"name":"tinea cruris","type":"related"}],"termid":"MONDO:0001405","xrefs":{"Monarch":{"xref_id":"0001405"}}}


id: GO:0060807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that ultimately results in a cell being specified to adopt a definitive endodermal cell fate.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in definitive endodermal cell fate specification (obsolete GO:0060807)","termid":"GO:0060807"}


id: GO:1905585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of outer hair cell apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24472721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"regulates","term_name":"outer hair cell apoptotic process","termid":"GO:1905584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of outer hair cell apoptotic process","synonyms":[{"name":"regulation of cochlear outer hair cell apoptosis","type":"narrow"},{"name":"regulation of cochlear outer hair cell apoptotic process","type":"exact"},{"name":"regulation of outer hair cell apoptosis","type":"narrow"}],"termid":"GO:1905585"}


id: PR:P0CT70
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L2-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.13c","secondary_identifiers":["UniProtKB:P0CT70"],"synonyms":[{"name":"K37 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"K5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"KD4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RPL8","type":"exact"}],"termid":"PR:P0CT70"}


id: FYPO:0007513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the number of ribosomal DNA (rDNA) repeats present in the rDNA arrays on chromosome III is significantly greater than the range in wild type cells.","definition_xrefs":["PomBase:mah","PMID:17690116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rDNA copy number","termid":"FYPO:0004823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased rDNA copy number during vegetative growth","synonyms":[{"name":"increased copy number of rDNA repeats","type":"exact"},{"name":"increased copy number of rDNA repeats during mitotic cell cycle","type":"related"},{"name":"increased rDNA copy number during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007513"}


id: GO:0071134
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to thrombospondin-1.","definition_xrefs":["PMID:17413041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha9-beta1 integrin-thrombospondin-1 complex","synonyms":[{"name":"ITGA9-ITGB1-THBS1 complex","type":"narrow"}],"termid":"GO:0071134"}


id: MONDO:0002660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eyelid disease that is characterized by exacerbations and remissions of eyelid edema, which results in a stretching and subsequent atrophy of the eyelid tissue, leading to the formation of redundant folds over the lid margins.","definition_xrefs":["DOID:348","Wikipedia:Blepharochalasis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blepharochalasis","secondary_identifiers":["UMLS:C0005742","ICD10CM:H02.3","MEDGEN:14154","ICD9:374.34","SCTID:47704002","HP:0010749","icd11.foundation:583527617"],"synonyms":[{"name":"blepharochalasis","type":"exact"},{"name":"blepharochalasis (disease)","type":"exact"}],"termid":"MONDO:0002660","xrefs":{"Monarch":{"xref_id":"0002660"}}}


id: PBO:0058542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6088","termid":"PBO:0058542"}


id: MONDO:0018167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary essential cutis verticis gyrata is a rare, progressive dermis disorder characterized by thickening of the scalp resulting in redundancy of the skin which gives rise to folds and grooves that give the scalp a cerebriform appearance. Folds cannot be corrected by pressure or traction and typically are symmetric and extend anteroposteriorly from vertex to occiput and/or transversely in occipital region. Additional features may include mild subungual hyperkeratosis and distal onycholysis of the nail plates of the great toes. It is not associated with neurological and ophthalmological changes, nor with secondary causes.","definition_xrefs":["Orphanet:357220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutis verticis gyrata","termid":"MONDO:0019033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"primary essential cutis verticis gyrata","secondary_identifiers":["UMLS:C4707327","MEDGEN:1632625","icd11.foundation:895947895","GARD:21537","SCTID:765135003"],"termid":"MONDO:0018167","xrefs":{"Monarch":{"xref_id":"0018167"}}}


id: PBO:0029726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_separation_after_cytokinesis_resulting_in_septated_cell","termid":"PBO:0029726"}


id: MONDO:0002980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myofibroma (obsolete MONDO:0002980)","termid":"MONDO:0002980","xrefs":{"Monarch":{"xref_id":"0002980"}}}


id: PBO:0005080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic chromosome segregation protein (predicted)","termid":"PBO:0005080"}


id: PBO:0028874
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_poly(A)_RNA_binding","termid":"PBO:0028874"}


id: PBO:0028670
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Kms1_foci","termid":"PBO:0028670"}


id: GO:0046804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-protein cross-link between peptidyl-threonine and peptidyl-cysteine by the synthesis of (2S,3S,4Xi,6R)-3-methyl-lanthionine sulfoxide (3-methyl-L-lanthionine sulfoxide), as found in the antibiotic actagardine.","definition_xrefs":["RESID:AA0330"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via (2S,3S,4Xi,6R)-3-methyl-lanthionine sulfoxide (obsolete GO:0046804)","synonyms":[{"name":"peptide cross-linking via (2S,3S,4Xi,6R)-3-methyl-lanthionine sulphoxide","type":"exact"}],"termid":"GO:0046804"}


id: PBO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible horizontal transfer","termid":"PBO:0000085"}


id: GO:1901047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of the insulin receptor binding to insulin that controls viability and duration in the adult phase of the life-cycle.","definition_xrefs":["GOC:TermGenie","GOC:kmv","PMID:9360933"],"gene_count":0,"genotype_count":0,"name":"obsolete insulin receptor signaling pathway involved in determination of adult lifespan (obsolete GO:1901047)","synonyms":[{"name":"daf-2 receptor signaling pathway of determination of adult lifespan","type":"narrow"},{"name":"insulin receptor signaling pathway of determination of adult lifespan","type":"exact"},{"name":"insulin receptor signalling pathway of determination of adult lifespan","type":"exact"}],"termid":"GO:1901047"}


id: MONDO:0015798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multinodular intermediate fibroblastic neoplasm that arises from soft tissue or viscera, in children and young adults. It is characterized by the presence of spindle-shaped fibroblasts and myofibroblasts, and a chronic inflammatory infiltrate composed of eosinophils, lymphocytes, and plasma cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflammatory myofibroblastic tumor","secondary_identifiers":["ONCOTREE:IMT","NCIT:C6481","MedDRA:10067917","GARD:7146","ICDO:8825/1","MEDGEN:137723","MESH:D006104","DOID:0050905","Orphanet:178342","UMLS:C0334121"],"synonyms":[{"name":"IMT","type":"exact"},{"name":"inflammatory fibrosarcoma","type":"exact"},{"name":"inflammatory myofibroblastic neoplasm","type":"exact"},{"name":"inflammatory myofibroblastic tumor","type":"exact"},{"name":"inflammatory pseudotumor","type":"exact"}],"termid":"MONDO:0015798","xrefs":{"Monarch":{"xref_id":"0015798"}}}


id: PBO:0087891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor that regulates middle-sporulation genes; required for mitotic repression of middle sporulation-specific genes; also acts as general replication initiation factor; involved in telomere maintenance, chromatin silencing; regulated by pachytene checkpoint","termid":"PBO:0087891"}


id: MOD:01541
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01541"}


id: PBO:0079797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B4","termid":"PBO:0079797"}


id: PBO:0059116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mov10 like RISC complex RNA helicase 1","termid":"PBO:0059116"}


id: PBO:0070902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 10","termid":"PBO:0070902"}


id: MOD:00471
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDT-maleimide-PEO-biotin","synonyms":[{"name":"EDT-maleimide-PEO-biotin","type":"related"}],"termid":"MOD:00471"}


id: PBO:0108988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilizer of axonemal microtubules 4","termid":"PBO:0108988"}


id: PBO:0087204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine decarboxylase; required for the biosynthesis of spermidine and spermine; cells lacking Spe2p require spermine or spermidine for growth in the presence of oxygen but not when grown anaerobically","termid":"PBO:0087204"}


id: MONDO:0007531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electroencephalographic peculiarity: fronto-precentral beta wave groups","secondary_identifiers":["OMIM:130300","UMLS:C1851756","MEDGEN:343646"],"synonyms":[{"name":"electroencephalographic peculiarity: fronto-precentral beta wave groups","type":"exact"}],"termid":"MONDO:0007531","xrefs":{"Monarch":{"xref_id":"0007531"}}}


id: PR:O74450
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pop23 gene.","definition_xrefs":["UniProtKB:O74450","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleases P/MRP protein subunit pop3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.05","synonyms":[{"name":"RNA-processing protein pop3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pop23","type":"exact"}],"termid":"PR:O74450"}


id: PBO:0028232
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-alpha,alpha-trehalase_activity_increase_abolished_during_cellular_response_to_salt_stress","termid":"PBO:0028232"}


id: PBO:0076174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1C member 5, pseudogene","termid":"PBO:0076174"}


id: PBO:0072165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 2","termid":"PBO:0072165"}


id: GO:0035646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from endosomes to the melanosome, a specialised lysosome-related organelle.","definition_xrefs":["PMID:16162817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome to pigment granule transport","termid":"GO:0043485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"endosome to melanosome transport","termid":"GO:0035646"}


id: PBO:0049842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 5A","termid":"PBO:0049842"}


id: PBO:0088895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin calcium-activated chloride channel OR Ca(2+)-activated phospholipid scramblase involved in ER-plasma membrane tethering Ist2","termid":"PBO:0088895"}


id: GO:1903997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of non-membrane spanning protein tyrosine kinase activity.","definition_xrefs":["PMID:10518561","GOC:BHF","GOC:nc","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of non-membrane spanning protein tyrosine kinase activity (obsolete GO:1903997)","synonyms":[{"name":"activation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"narrow"},{"name":"activation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"activation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"activation of focal adhesion kinase activity","type":"narrow"},{"name":"activation of janus kinase 1 activity","type":"narrow"},{"name":"activation of janus kinase 2 activity","type":"narrow"},{"name":"activation of janus kinase 3 activity","type":"narrow"},{"name":"activation of non-membrane spanning protein tyrosine kinase activity","type":"narrow"},{"name":"activation of non-specific protein-tyrosine kinase activity","type":"narrow"},{"name":"activation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"positive regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"positive regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"positive regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"positive regulation of focal adhesion kinase activity","type":"narrow"},{"name":"positive regulation of janus kinase 1 activity","type":"narrow"},{"name":"positive regulation of janus kinase 2 activity","type":"narrow"},{"name":"positive regulation of janus kinase 3 activity","type":"narrow"},{"name":"positive regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"positive regulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"up regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"up regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"up regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"up regulation of focal adhesion kinase activity","type":"narrow"},{"name":"up regulation of janus kinase 1 activity","type":"narrow"},{"name":"up regulation of janus kinase 2 activity","type":"narrow"},{"name":"up regulation of janus kinase 3 activity","type":"narrow"},{"name":"up regulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"up regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"up regulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"up-regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"up-regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"up-regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"up-regulation of focal adhesion kinase activity","type":"narrow"},{"name":"up-regulation of janus kinase 1 activity","type":"narrow"},{"name":"up-regulation of janus kinase 2 activity","type":"narrow"},{"name":"up-regulation of janus kinase 3 activity","type":"narrow"},{"name":"up-regulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"up-regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"up-regulation of p60c-src protein tyrosine kinase activity","type":"narrow"},{"name":"upregulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"upregulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"upregulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"upregulation of focal adhesion kinase activity","type":"narrow"},{"name":"upregulation of janus kinase 1 activity","type":"narrow"},{"name":"upregulation of janus kinase 2 activity","type":"narrow"},{"name":"upregulation of janus kinase 3 activity","type":"narrow"},{"name":"upregulation of non-membrane spanning protein tyrosine kinase activity","type":"exact"},{"name":"upregulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"upregulation of p60c-src protein tyrosine kinase activity","type":"narrow"}],"termid":"GO:1903997"}


id: MONDO:0850093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An electroclinical syndrome characterized by the occurrence of generalized onset seizures that cause lapses in awareness, begin and end abruptly, typically last only a few seconds and are associated with abnormal spike-wave discharges as seen by electroencephalogram.","definition_xrefs":["DOID:0070309"],"gene_count":0,"genotype_count":0,"name":"obsolete absence epilepsy (obsolete MONDO:0850093)","termid":"MONDO:0850093","xrefs":{"Monarch":{"xref_id":"0850093"}}}


id: PBO:0042850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP58 divergent transcript","termid":"PBO:0042850"}


id: GO:1902962
data:
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id: GO:0018182
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id: PATO:0002071
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id: FYPO:0000003
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id: PBO:0030847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_arrest_in_mitotic_G2_phase_during_response_to_DNA_damage","termid":"PBO:0030847"}


id: GO:0042752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a circadian rhythm. A circadian rhythm is a biological process in an organism that recurs with a regularity of approximately 24 hours.","definition_xrefs":["GOC:jl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of circadian rhythm","termid":"GO:0042752"}


id: PBO:0043958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma C","termid":"PBO:0043958"}


id: PBO:0030567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_alanine_level","termid":"PBO:0030567"}


id: PBO:0111967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dsl1/NZR complex secretory pathway protein RINT1 family","termid":"PBO:0111967"}


id: GO:0150137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-37 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:30362558","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-37 production","synonyms":[{"name":"interleukin-37 biosynthetic process","type":"narrow"}],"termid":"GO:0150137"}


id: PBO:0067655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 832, pseudogene","termid":"PBO:0067655"}


id: MOD:02055
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-serine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-serine residue","synonyms":[{"name":"XlnkSer","type":"exact"}],"termid":"MOD:02055"}


id: GO:0031581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of hemidesmosomes, integrin-containing protein complexes that bind to laminin in the basal lamina. Hemidesmosomes form the contact between the basal surface of epithelial cells and the underlying basal lamina.","definition_xrefs":["PMID:15983403","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate junction assembly","termid":"GO:0007044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"hemidesmosome assembly","secondary_identifiers":["Reactome:R-HSA-446107"],"termid":"GO:0031581"}


id: FYPO:0001674
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of L-aminoadipate-semialdehyde dehydrogenase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal L-aminoadipate-semialdehyde dehydrogenase activity","synonyms":[{"name":"abnormal alpha-aminoadipate reductase activity","type":"exact"}],"termid":"FYPO:0001674"}


id: PBO:0042430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 37 like 1, HSP90 cochaperone","termid":"PBO:0042430"}


id: GO:0031704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an apelin receptor.","definition_xrefs":["GOC:nln","GOC:mah","GOC:vp","PMID:12787050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"apelin receptor binding","secondary_identifiers":["GO:0042569"],"synonyms":[{"name":"APJ receptor binding","type":"exact"},{"name":"apelin receptor ligand","type":"narrow"}],"termid":"GO:0031704"}


id: FYPO:0003435
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ornithine carbamoyltransferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal ornithine carbamoyltransferase activity","termid":"FYPO:0003433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0005447","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000002"],"is_obsolete":false,"name":"increased ornithine carbamoyltransferase activity","termid":"FYPO:0003435"}


id: PBO:0058024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3974","termid":"PBO:0058024"}


id: PBO:0027759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_protein_during_meiotic_cell_cycle","termid":"PBO:0027759"}


id: PR:O74349
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase listerin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12389:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase listerin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.09c","secondary_identifiers":["UniProtKB:O74349"],"synonyms":[{"name":"SPBC21D10.09c","type":"related"},{"name":"Spom972h-LTN1","type":"exact"}],"termid":"PR:O74349"}


id: MONDO:0017467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tibio-fibular synostosis is a rare, non-syndromic limb malformation characterized by fusion of the proximal or distal tibial and fibular metaphysis and/or diaphysis, frequently associated with distal positioning of the proximal tibiofibular joint, leg length discrepancy, bowing of the fibula, and valgus deformity of the knee.","definition_xrefs":["Orphanet:295028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synostosis","termid":"MONDO:0001411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tibio-fibular synostosis","secondary_identifiers":["GARD:21208","SCTID:737581000","UMLS:C4545230","icd11.foundation:1756900121","MEDGEN:1616659"],"synonyms":[{"name":"Tibio-fibular fusion","type":"exact"}],"termid":"MONDO:0017467","xrefs":{"Monarch":{"xref_id":"0017467"}}}


id: PBO:0000440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Pmc2/Med1","termid":"PBO:0000440"}


id: GO:1990261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the unspliced pre-mRNA (pre-messenger RNA).","definition_xrefs":["GOC:rb","PMID:22844259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pre-mRNA catabolic process","synonyms":[{"name":"pre-mRNA decay","type":"exact"},{"name":"unspliced RNA decay","type":"exact"}],"termid":"GO:1990261"}


id: FYPO:0007695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a DNA strand exchange inhibitor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:33493431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal DNA strand exchange inhibitor activity","synonyms":[{"name":"normal RecA-family recombinase inhibitor activity","type":"exact"},{"name":"normal negative regulation of RecA-family recombinase activity","type":"related"}],"termid":"FYPO:0007695"}


id: GO:0016175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)H + O2 = NAD(P)H + O2-.","definition_xrefs":["GOC:ai","PMID:10806195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor","termid":"GO:0050664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"superoxide-generating NAD(P)H oxidase activity","secondary_identifiers":["Reactome:R-HSA-9673797","Reactome:R-HSA-6789092","Reactome:R-HSA-6807557","Reactome:R-HSA-5668718","Reactome:R-HSA-1497810","Reactome:R-HSA-1236967","Reactome:R-HSA-5218841","Reactome:R-HSA-5668629","Reactome:R-HSA-5668731","Reactome:R-HSA-1222376"],"synonyms":[{"name":"cytochrome B-245","type":"related"}],"termid":"GO:0016175"}


id: MONDO:0014706
data:
  {"annotated_genes":["SJAG_00660","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86329,86330],"is_not":false,"summary":null,"term":"MONDO:0014706"}]},"cv_name":"mondo","definition":"An autosomal dominant cutis laxa characterized by thin skin with visible veins and wrinkles, cataract or corneal clouding, clenched fingers, pre- and postnatal growth retardation, moderate intellectual disability, and a combination of muscle hypotonia with brisk muscle reflexes that has material basis in heterozygous mutation in the ALDH18A1 gene on chromosome 10q24.","definition_xrefs":["DOID:0070131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"autosomal dominant cutis laxa","termid":"MONDO:0019571"},{"relation_name":"is_a","term_name":"P5CS deficiency","termid":"MONDO:0100126"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"cutis laxa, autosomal dominant 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16143","MEDGEN:899774","OMIM:616603","UMLS:C4225268"],"synonyms":[{"name":"ADCL3","type":"exact"},{"name":"autosomal dominant cutis laxa 3","type":"related"},{"name":"cutis laxa, autosomal dominant 3","type":"exact"},{"name":"cutis laxa, autosomal dominant type 3","type":"exact"}],"termid":"MONDO:0014706","terms_by_termid":{"MONDO:0014706":null},"xrefs":{"Monarch":{"xref_id":"0014706"}}}


id: MONDO:0004122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, small cell, poorly differentiated thymic neuroendocrine carcinoma, characterized by the presence of a high mitotic rate and numerous apoptotic bodies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"thymic neuroendocrine carcinoma","termid":"MONDO:0020516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"thymus small cell carcinoma","secondary_identifiers":["NCIT:C6460","EFO:1000578","UMLS:C1335980","DOID:7142","MEDGEN:234784"],"synonyms":[{"name":"Thymus small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of Thymus","type":"exact"},{"name":"small cell carcinoma of the Thymus","type":"exact"},{"name":"small cell carcinoma of thymus","type":"exact"},{"name":"thymic small cell carcinoma","type":"exact"},{"name":"thymic small cell carcinoma neuroendocrine type","type":"exact"},{"name":"thymus small cell carcinoma","type":"exact"}],"termid":"MONDO:0004122","xrefs":{"Monarch":{"xref_id":"0004122"}}}


id: PBO:0042636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein Y-linked 11 pseudogene","termid":"PBO:0042636"}


id: PATO:0001528
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sound amplitude which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sound quality","termid":"PATO:0001519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loud","termid":"PATO:0001528"}


id: MONDO:0859244
data:
  {"annotated_genes":["SJAG_01081","SJAG_02364"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87297,87298],"is_not":false,"summary":null,"term":"MONDO:0859244"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01081":null,"SJAG_02364":null},"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1291561","MEDGEN:713858","OMIM:619859"],"termid":"MONDO:0859244","terms_by_termid":{"MONDO:0859244":null},"xrefs":{"Monarch":{"xref_id":"0859244"}}}


id: GO:0060729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A tissue homeostatic process required for the maintenance of the structure of the intestinal epithelium.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of gastrointestinal epithelium","termid":"GO:0030277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal epithelial structure maintenance","synonyms":[{"name":"epithelial structure maintenance of intestine","type":"exact"},{"name":"maintenance of intestinal epithelium","type":"exact"}],"termid":"GO:0060729"}


id: GO:0034058
data:
  {"annotated_genes":["SJAG_00380","SJAG_05184","SJAG_03347","SJAG_01379","SJAG_00204","SJAG_02315"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71625,74931,77464,79945,99846,100050],"is_not":false,"summary":null,"term":"GO:0034058"}]},"cv_name":"biological_process","definition":"The homotypic fusion of endocytic vesicles to form or add to an early endosome.","definition_xrefs":["PMID:9422733","PMID:11964142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00204":null,"SJAG_00380":null,"SJAG_01379":null,"SJAG_02315":null,"SJAG_03347":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0061024","GO:0006810"],"is_obsolete":false,"name":"endosomal vesicle fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"endosome vesicle fusion","type":"exact"}],"termid":"GO:0034058","terms_by_termid":{"GO:0034058":null}}


id: PATO:0001916
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear and upper surface of an organism relative to another entity.","definition_xrefs":["PATOC:wd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior to","termid":"PATO:0001633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterodorsal to","termid":"PATO:0001916"}


id: GO:0004585
data:
  {"annotated_genes":["SJAG_00635"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78813],"is_not":false,"summary":null,"term":"GO:0004585"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: carbamoyl phosphate + L-ornithine = phosphate + L-citrulline.","definition_xrefs":["EC:2.1.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"ornithine carbamoyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70560","RHEA:19513","MetaCyc:ORNCARBAMTRANSFER-RXN"],"synonyms":[{"name":"L-ornithine carbamoyltransferase activity","type":"related"},{"name":"L-ornithine carbamyltransferase activity","type":"related"},{"name":"L-ornithine transcarbamylase activity","type":"related"},{"name":"OTC activity","type":"related"},{"name":"OTCase activity","type":"related"},{"name":"carbamoyl-phosphate:L-ornithine carbamoyltransferase activity","type":"related"},{"name":"carbamylphosphate-ornithine transcarbamylase activity","type":"related"},{"name":"citrulline phosphorylase activity","type":"related"},{"name":"ornithine carbamyltransferase activity","type":"related"},{"name":"ornithine transcarbamylase activity","type":"related"}],"termid":"GO:0004585","terms_by_termid":{"GO:0004585":null}}


id: GO:0005141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-10 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"interleukin-10 receptor binding","synonyms":[{"name":"IL-10","type":"narrow"},{"name":"interleukin-10 receptor ligand","type":"narrow"}],"termid":"GO:0005141"}


id: PBO:0068678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 59, pseudogene","termid":"PBO:0068678"}


id: PBO:0045248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC27 antisense RNA 1","termid":"PBO:0045248"}


id: GO:0102549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-16:0-monogalactosyldiacylglycerol + H2O = sn-1-lyso-2-16:0-monogalactosyldiacylglycerol + oleate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-16:0-monogalactosyldiacylglycerol lipase activity (obsolete GO:0102549)","termid":"GO:0102549"}


id: GO:0046245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of styrene, an aromatic hydrocarbon liquid used in the manufacture of polystyrene.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete styrene biosynthetic process (obsolete GO:0046245)","synonyms":[{"name":"styrene anabolism","type":"exact"},{"name":"styrene biosynthesis","type":"exact"},{"name":"styrene biosynthetic process","type":"exact"},{"name":"styrene formation","type":"exact"},{"name":"styrene synthesis","type":"exact"}],"termid":"GO:0046245"}


id: PBO:0113491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor; regulates multidrug resistance and the oxidative stress response; forms a heterodimer with Pdr1p; contains a Zn(II)2Cys6 zinc finger domain that interacts with a pleiotropic drug resistance element in vitro; negative regulator of autophagy, modulating the transcription of genes involved in NADPH production and the pentose phosphate pathway; Stb5p expression is reduced during nitrogen starvation and autophagy induction, while STB5 mRNA levels are significantly increased","termid":"PBO:0113491"}


id: GO:1902058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sporocarp development involved in sexual reproduction.","definition_xrefs":["PMID:23480775","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive fruiting body development","termid":"GO:0031155"},{"relation_name":"regulates","term_name":"sporocarp development involved in sexual reproduction","termid":"GO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sporocarp development involved in sexual reproduction","synonyms":[{"name":"regulation of ascus development","type":"narrow"},{"name":"regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"regulation of perfect stage fruiting body development","type":"narrow"}],"termid":"GO:1902058"}


id: GO:0005998
data:
  {"annotated_genes":["SJAG_04276"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119427],"is_not":false,"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xylulose, the ketopentose threo-2-pentulose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylulose metabolic process","termid":"GO:0005997"},{"relation_name":"is_a","term_name":"pentose catabolic process","termid":"GO:0019323"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"xylulose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:XYLCAT-PWY"],"synonyms":[{"name":"xylulose breakdown","type":"exact"},{"name":"xylulose catabolism","type":"exact"},{"name":"xylulose degradation","type":"exact"}],"termid":"GO:0005998","terms_by_termid":{"GO:0005998":null}}


id: GO:0035626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a juvenile hormone binding to its receptor, a bHLH-PAS transcription factor, to regulate gene expression.","definition_xrefs":["PMID:28285758","PMID:29888456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"intracellular receptor signaling pathway","termid":"GO:0030522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"juvenile hormone mediated signaling pathway","synonyms":[{"name":"juvenile hormone mediated signalling pathway","type":"exact"},{"name":"juvenile hormone-mediated signaling pathway","type":"exact"}],"termid":"GO:0035626"}


id: PBO:0075974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroidogenic acute regulatory protein pseudogene 1","termid":"PBO:0075974"}


id: GO:0150102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monocyte activation.","definition_xrefs":["PMID:15597323","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"negatively_regulates","term_name":"monocyte activation","termid":"GO:0042117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte activation","synonyms":[{"name":"repression of monocyte activation","type":"exact"}],"termid":"GO:0150102"}


id: GO:0047757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chondroitin D-glucuronate = dermatan L-iduronate.","definition_xrefs":["MetaCyc:CHONDROITIN-GLUCURONATE-5-EPIMERASE-RXN","EC:5.1.3.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"chondroitin-glucuronate 5-epimerase activity","secondary_identifiers":["Reactome:R-HSA-2022052","RHEA:21084"],"synonyms":[{"name":"chondroitin D-glucuronosyl 5-epimerase activity","type":"related"},{"name":"chondroitin-D-glucuronate 5-epimerase activity","type":"related"},{"name":"dermatan-sulfate 5-epimerase activity","type":"related"},{"name":"polyglucuronate 5-epimerase activity","type":"related"},{"name":"urunosyl C-5 epimerase activity","type":"related"}],"termid":"GO:0047757"}


id: MONDO:0014257
data:
  {"annotated_genes":["SJAG_00933"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86164],"is_not":false,"summary":null,"term":"MONDO:0014257"}]},"cv_name":"mondo","definition":"Any nephrotic syndrome in which the cause of the disease is a mutation in the COQ8B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, type 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080391","GARD:15989","UMLS:C3809965","MEDGEN:816295","OMIM:615573"],"synonyms":[{"name":"COQ8B nephrotic syndrome","type":"exact"},{"name":"NPHS9","type":"related"},{"name":"nephrotic syndrome caused by mutation in COQ8B","type":"exact"},{"name":"nephrotic syndrome, type 9","type":"exact"}],"termid":"MONDO:0014257","terms_by_termid":{"MONDO:0014257":null},"xrefs":{"Monarch":{"xref_id":"0014257"}}}


id: GO:0099151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic density assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynaptic density.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic specialization assembly","termid":"GO:0099150"},{"relation_name":"is_a","term_name":"regulation of excitatory synapse assembly","termid":"GO:1904889"},{"relation_name":"is_a","term_name":"regulation of postsynaptic density organization","termid":"GO:1905874"},{"relation_name":"regulates","term_name":"postsynaptic density assembly","termid":"GO:0097107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of postsynaptic density assembly","termid":"GO:0099151"}


id: PR:P0CY17
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mat1-Mc gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CY17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mc (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.09","synonyms":[{"name":"Spom972h-mat1-Mc","type":"exact"},{"name":"mat-Mc (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CY17"}


id: PBO:0078688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 2-1","termid":"PBO:0078688"}


id: MONDO:0016773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrophic lichen planus (LP) is a rare variant of cutaneous lichen planus characterized by the development of pale papules or plaques with an atrophic center.","definition_xrefs":["Orphanet:254449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"atrophic lichen planus","secondary_identifiers":["MEDGEN:9754","NCIT:C34777","icd11.foundation:1633911307","SCTID:25858008","UMLS:C0023647","GARD:12675","MedDRA:10056959"],"synonyms":[{"name":"atrophic LP","type":"exact"}],"termid":"MONDO:0016773","xrefs":{"Monarch":{"xref_id":"0016773"}}}


id: PBO:0073475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGCE pseudogene 1","termid":"PBO:0073475"}


id: PBO:0113047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromosome linkage inner nuclear membrane protein; CLIP, involved in perinuclear chromosome tethering and rDNA repeat stability; enriched at telomeres and subtelomeric regions; associates with and regulates subtelomeric genes, interacting with TREX (transcription export) factors; produces two splice variants with different functions; alternative splicing of SRC1 pre-mRNA is promoted by Hub1p; mutant is aneuploidy tolerant; SRC1 has a paralog, HEH2, that arose from the whole genome duplication","termid":"PBO:0113047"}


id: GO:0034727
data:
  {"annotated_genes":["SJAG_01274","SJAG_00004","SJAG_01135","SJAG_03851","SJAG_05017","SJAG_01722","SJAG_03100","SJAG_03718","SJAG_04502","SJAG_04232","SJAG_02100","SJAG_01283","SJAG_01382","SJAG_04655","SJAG_00645","SJAG_06309","SJAG_00355"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70673,71882,72523,72670,72936,72988,73474,73483,73701,73839,74771,77310,77411,79987,80019,80075,80438],"is_not":false,"summary":null,"term":"GO:0034727"}]},"cv_name":"biological_process","definition":"Degradation of a cell nucleus by microautophagy.","definition_xrefs":["GOC:autophagy","PMID:18701704","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microautophagy","termid":"GO:0016237"},{"relation_name":"is_a","term_name":"nucleophagy","termid":"GO:0044804"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00355":null,"SJAG_00645":null,"SJAG_01135":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01722":null,"SJAG_02100":null,"SJAG_03100":null,"SJAG_03718":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_05017":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"piecemeal microautophagy of the nucleus","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PMN","type":"exact"}],"termid":"GO:0034727","terms_by_termid":{"GO:0034727":null}}


id: MONDO:0100617
data:
  {"annotated_genes":["SJAG_04966","SJAG_01772"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86379,86380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030486"},{"annotations":[86276,86275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014732"}]},"cv_name":"mondo","definition":"Any neurological disorder in which the cause of the disease is a mutation in the VPS11 gene.","definition_xrefs":["PMID:26307567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01772":null,"SJAG_04966":null},"genotype_count":0,"is_obsolete":false,"name":"VPS11-related neurological disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100617","terms_by_termid":{"MONDO:0014732":null,"MONDO:0030486":null},"xrefs":{"Monarch":{"xref_id":"0100617"}}}


id: MONDO:0859186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chopra-Amiel-Gordon syndrome","secondary_identifiers":["OMIM:619504","MEDGEN:1794185","UMLS:C5561975"],"termid":"MONDO:0859186","xrefs":{"Monarch":{"xref_id":"0859186"}}}


id: PBO:0109432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, human RNF13 family homolog","termid":"PBO:0109432"}


id: FYPO:0006437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to methyl methanesulfonate. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle regulation during cellular response to methyl methanesulfonate","termid":"FYPO:0005373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"normal mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal mitotic DNA damage checkpoint activation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to MMS","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"}],"termid":"FYPO:0006437"}


id: GO:0070139
data:
  {"annotated_genes":["SJAG_16454","SJAG_02214"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75243,106497],"is_not":false,"summary":null,"term":"GO:0070139"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds between an alpha-carboxyl group and an alpha-amino group within the small conjugating protein SUMO.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein-specific endopeptidase activity","termid":"GO:0070137"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02214":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0140096","GO:0008233"],"is_obsolete":false,"name":"SUMO-specific endopeptidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2993763","Reactome:R-HSA-2990842","Reactome:R-HSA-2990840"],"termid":"GO:0070139","terms_by_termid":{"GO:0070139":null}}


id: PBO:0054556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1957","termid":"PBO:0054556"}


id: PBO:0090354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase alpha subunit Bet4","termid":"PBO:0090354"}


id: GO:0070330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 O2 + 3 reduced [NADPH--hemoprotein reductase] + testosterone = 17beta-estradiol + formate + 4 H+ + 4 H2O + 3 oxidized [NADPH--hemoprotein reductase]. Also converts androst-4-ene-3,17-dione into estrone.","definition_xrefs":["EC:1.14.14.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"aromatase activity","synonyms":[{"name":"estrogen synthetase activity","type":"narrow"}],"termid":"GO:0070330"}


id: GO:0008141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A glue which attaches the pupae to the substrate during metamorphosis, as in, but not restricted to, the true flies (Diptera, ncbi_taxonomy_id:7147).","definition_xrefs":["PMID:825230"],"gene_count":0,"genotype_count":0,"name":"obsolete puparial glue (sensu Diptera) (obsolete GO:0008141)","synonyms":[{"name":"puparial glue (sensu Diptera)","type":"exact"}],"termid":"GO:0008141"}


id: PBO:0081483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 365","termid":"PBO:0081483"}


id: PR:Q9Y7T6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec59 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7T6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol kinase sec59 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.10c","synonyms":[{"name":"Spom972h-sec59","type":"exact"}],"termid":"PR:Q9Y7T6"}


id: MOD:01834
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue containing common isotopes to 5x(13)C-labeled L-methionine sulfoxide.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfoxide","termid":"MOD:00719"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C-labeled L-methionine sulfoxide","termid":"MOD:01834"}


id: GO:0102608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tetracenomycin B3 + S-adenosyl-L-methionine = tetracenomycin E + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete tetracenomycin B3 8-O-methyl transferase activity (obsolete GO:0102608)","termid":"GO:0102608"}


id: PBO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyamine N-acetyltransferase (predicted)","termid":"PBO:0000988"}


id: GO:1905666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to endosome.","definition_xrefs":["GOC:bc","PMID:22732145","GOC:PARL","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to endosome","termid":"GO:0036010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to endosome","synonyms":[{"name":"regulation of protein localisation in endosome","type":"exact"},{"name":"regulation of protein localization in endosome","type":"exact"}],"termid":"GO:1905666"}


id: PBO:0085125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; required for 35S pre-RNA processing and 40S ribosomal subunit biogenesis","termid":"PBO:0085125"}


id: _global:processed_into
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is processed_into Y if a region X is modified to create Y.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"processed_into","termid":"_global:processed_into"}


id: GO:2000818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myoblast proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of myoblast proliferation","termid":"GO:2000291"},{"relation_name":"negatively_regulates","term_name":"myoblast proliferation","termid":"GO:0051450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myoblast proliferation","termid":"GO:2000818"}


id: PBO:0031766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_antimycin_A","termid":"PBO:0031766"}


id: PBO:0005365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATPase, Arb family ABCF1-like (predicted)","termid":"PBO:0005365"}


id: PBO:0085030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-ATPase base subunit of the 19S RP of the 26S proteasome; may participate in the recognition of several ligands of the proteasome; contains a leucine-rich repeat (LRR) domain, a site for protein-protein interactions; RP is the acronym for regulatory particle","termid":"PBO:0085030"}


id: GO:0015901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cycloheximide into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Cycloheximide is an antibiotic produced by Streptomyces which interferes with protein synthesis in eukaryotes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"cycloheximide transport","termid":"GO:0015901"}


id: MONDO:0007383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stern-Lubinsky-Durrie syndrome is characterized by corneal epithelial changes (associated with photophobia and burning and watering of the eyes), diffuse palmoplantar hyperkeratosis, distal onycholysis, brachydactyly, short stature, dental problems, and premature birth. It has been described in seven individuals from three generations of one family. It is transmitted as an autosomal dominant trait.","definition_xrefs":["Orphanet:3194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Stern-Lubinsky-Durrie syndrome","secondary_identifiers":["icd11.foundation:1754695879","MESH:C537488","OMIM:122440","SCTID:723584003","GARD:1531","MEDGEN:342260","UMLS:C1852542"],"synonyms":[{"name":"CORNEODERMATOOSSEOUS syndrome","type":"related"},{"name":"Cdo syndrome","type":"related"},{"name":"Stern Lubinsky Durrie syndrome","type":"related"},{"name":"corneal dystrophy epithelial and short stature","type":"related"},{"name":"corneal dystrophy, epithelial, with skin and skeletal changes","type":"related"},{"name":"corneo-dermato-osseous syndrome","type":"exact"}],"termid":"MONDO:0007383","xrefs":{"Monarch":{"xref_id":"0007383"}}}


id: PBO:0072372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 58","termid":"PBO:0072372"}


id: MONDO:0004119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete endometrial small cell carcinoma (obsolete MONDO:0004119)","termid":"MONDO:0004119","xrefs":{"Monarch":{"xref_id":"0004119"}}}


id: GO:0018494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (1R,4R)-dihydrocarvone + A = (R)-carvone + AH2, and (1R,4S)-isodihydrocarvone + A = (S)-carvone + AH2.","definition_xrefs":["EC:1.3.99.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"carvone reductase activity","secondary_identifiers":["UM-BBD_reactionID:r0732"],"termid":"GO:0018494"}


id: GO:0047020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + (5Z,13E)-(15S)-9-alpha,15-dihydroxy-11-oxoprosta-5,13-dienoate = NADPH + H+ + (5Z,13E)-9-alpha-hydroxy-11,15-dioxoprosta-5,13-dienoate.","definition_xrefs":["MetaCyc:1.1.1.196-RXN","EC:1.1.1.196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"15-hydroxyprostaglandin-D dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:20744"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,15-dihydroxy-11-oxoprosta-5,13-dienoate:NADP+ 15-oxidoreductase activity","type":"related"},{"name":"15-hydroxy PGD2 dehydrogenase activity","type":"related"},{"name":"15-hydroxyprostaglandin dehydrogenase (NADP)","type":"related"},{"name":"NADP-PGD2 dehydrogenase activity","type":"related"},{"name":"NADP-dependent 15-hydroxyprostaglandin dehydrogenase","type":"broad"},{"name":"NADP-linked 15-hydroxyprostaglandin dehydrogenase","type":"broad"},{"name":"NADP-linked prostaglandin D2 dehydrogenase activity","type":"related"},{"name":"NADP-specific 15-hydroxyprostaglandin dehydrogenase","type":"broad"},{"name":"dehydrogenase, 15-hydroxyprostaglandin (nicotinamide adenine dinucleotide phosphate)","type":"related"},{"name":"dehydrogenase, prostaglandin D2","type":"related"},{"name":"prostaglandin D2 dehydrogenase activity","type":"related"},{"name":"prostaglandin-D 15-dehydrogenase (NADP(+)) activity","type":"related"},{"name":"prostaglandin-D 15-dehydrogenase (NADP)","type":"related"},{"name":"prostaglandin-D 15-dehydrogenase (NADP+) activity","type":"related"}],"termid":"GO:0047020"}


id: MONDO:0000800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a brown shrimp.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete brown shrimp allergy (obsolete MONDO:0000800)","secondary_identifiers":["DOID:0060525"],"synonyms":[{"name":"Farfantepenaeus aztecus allergy","type":"exact"},{"name":"allergy of brown shrimp","type":"exact"},{"name":"brown shrimp allergic disease","type":"exact"}],"termid":"MONDO:0000800","xrefs":{"Monarch":{"xref_id":"0000800"}}}


id: GO:0015060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete green-sensitive opsin (obsolete GO:0015060)","synonyms":[{"name":"green-sensitive opsin","type":"exact"}],"termid":"GO:0015060"}


id: PBO:0031441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_protein_during_vegetative_growth","termid":"PBO:0031441"}


id: PR:Q09679
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gmh1 gene.","definition_xrefs":["UniProtKB:Q09679","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase gmh1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.11","synonyms":[{"name":"Spom972h-gmh1","type":"exact"}],"termid":"PR:Q09679"}


id: PBO:0079002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 2-1","termid":"PBO:0079002"}


id: GO:0034132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 1 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 1 signaling pathway","termid":"GO:0034131"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 1 signaling pathway","termid":"GO:0034130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 1 signaling pathway","synonyms":[{"name":"negative regulation of TLR1 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 1 signalling pathway","type":"exact"}],"termid":"GO:0034132"}


id: MONDO:0003413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm arising from the hair follicle.","definition_xrefs":["NCIT:C7367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal appendage tumor","termid":"MONDO:0002297"},{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hair follicle neoplasm","secondary_identifiers":["UMLS:C0859920","DOID:5375","MEDGEN:167814"],"synonyms":[{"name":"hair follicle neoplasm","type":"exact"},{"name":"hair follicle neoplasm (disease)","type":"exact"},{"name":"hair follicle tumor","type":"exact"},{"name":"hair follicle tumour","type":"exact"},{"name":"hair matrix neoplasm","type":"related"},{"name":"hair matrix tumor","type":"related"},{"name":"hair matrix tumour","type":"related"},{"name":"neoplasm of hair follicle","type":"exact"},{"name":"neoplasm of the hair follicle","type":"exact"},{"name":"tumor of hair follicle","type":"exact"},{"name":"tumour of hair follicle","type":"exact"}],"termid":"MONDO:0003413","xrefs":{"Monarch":{"xref_id":"0003413"}}}


id: PBO:0034077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_hypermorphosis_relationship_with","termid":"PBO:0034077"}


id: MONDO:0021541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma that involves the retina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of retina","termid":"MONDO:0021453"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hemangioma of retina","secondary_identifiers":["UMLS:C0154051","ICD9:228.03","SCTID:93470007","NCIT:C3634","MEDGEN:102307"],"synonyms":[{"name":"angioma of retina","type":"exact"},{"name":"angioma of the retina","type":"exact"},{"name":"hemangioma of the retina","type":"exact"},{"name":"retina angioma","type":"exact"},{"name":"retina hemangioma","type":"exact"},{"name":"retinal angioma","type":"exact"},{"name":"retinal hemangioma","type":"exact"}],"termid":"MONDO:0021541","xrefs":{"Monarch":{"xref_id":"0021541"}}}


id: FYPO:0004425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of threonine residues in one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein threonine phosphorylation (obsolete FYPO:0004425)","synonyms":[{"name":"abolished peptidyl-threonine phosphorylation","type":"exact"},{"name":"protein threonine phosphorylation abolished","type":"exact"}],"termid":"FYPO:0004425"}


id: GO:0010006
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein translocon complex at the chloroplast outer membrane.","definition_xrefs":["PMID:10646606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"chloroplast outer membrane","termid":"GO:0009707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Toc complex","termid":"GO:0010006"}


id: MONDO:1012973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Skeletal dysplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973","xrefs":{"Monarch":{"xref_id":"1012973"}}}


id: FYPO:0007120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to leucine starvation does not occur; arrest normally occurs in G1 phase.","definition_xrefs":["PMID:31456006","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished cell cycle arrest in mitotic G1 phase in response to leucine starvation","synonyms":[{"name":"abolished cell cycle arrest in mitotic G1 phase during cellular response to leucine starvation","type":"exact"},{"name":"abolished cell cycle arrest in mitotic G1 phase in response to leucine depletion","type":"exact"},{"name":"abolished cell cycle arrest in mitotic G1 phase in response to leucine deprivation","type":"exact"},{"name":"abolished leucine deprivation-induced G1 arrest","type":"exact"},{"name":"abolished mitotic G1 arrest in response to leucine starvation","type":"exact"},{"name":"abolished mitotic cell cycle arrest in G1 phase in response to leucine starvation","type":"exact"},{"name":"cell cycle arrest in mitotic G1 phase in response to leucine starvation abolished","type":"exact"}],"termid":"FYPO:0007120"}


id: PBO:0051585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 18 receptor 1","termid":"PBO:0051585"}


id: GO:0061386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The closure of the temporary ventral gap in the optic cup that contributes to its shaping.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial sheet","termid":"GO:0002011"},{"relation_name":"part_of","term_name":"optic cup morphogenesis involved in camera-type eye development","termid":"GO:0002072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"closure of optic fissure","synonyms":[{"name":"closure or choriod fissure","type":"related"}],"termid":"GO:0061386"}


id: PBO:0086726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; not an essential gene; YMR206W has a paralog, YNR014W, that arose from the whole genome duplication","termid":"PBO:0086726"}


id: PBO:0034248
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_syntenic_orthology_relationship_with","termid":"PBO:0034248"}


id: FYPO:0000143
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype that affects the regulation of DNA-dependent transcription.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype","termid":"FYPO:0000288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"transcription regulation phenotype","synonyms":[{"name":"fission yeast transcription regulation phenotype","type":"exact"},{"name":"gene-specific transcription regulation phenotype","type":"related"},{"name":"transcriptional control phenotype","type":"broad"}],"termid":"FYPO:0000143"}


id: GO:2000530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of regulation of insulin secretion involved in cellular response to glucose stimulus.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of regulation of insulin secretion involved in cellular response to glucose stimulus (obsolete GO:2000530)","synonyms":[{"name":"positive regulation of regulation of insulin secretion in response to glucose","type":"exact"},{"name":"positive regulation of regulation of insulin secretion involved in cellular response to glucose stimulus","type":"exact"}],"termid":"GO:2000530"}


id: GO:0002655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction to nonself antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction dependent upon immune response","termid":"GO:0002652"},{"relation_name":"regulates","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction to nonself antigen","termid":"GO:0002655"}


id: SO:0001257
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The binding site (recognition site) of a homing endonuclease. The binding site is typically large.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease_binding_site","termid":"SO:0000059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homing_endonuclease_binding_site","synonyms":[{"name":"homing endonuclease binding site","type":"exact"}],"termid":"SO:0001257"}


id: PBO:0080019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 5","termid":"PBO:0080019"}


id: GO:0060694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of cholesterol transporter activity.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cholesterol transporter activity (obsolete GO:0060694)","termid":"GO:0060694"}


id: PBO:0091511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane P-type proton exporting ATPase, P3-type Pma1","termid":"PBO:0091511"}


id: GO:0034946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-isopropylbut-3-enoyl-CoA + H2O = 3-isopropylbut-3-enoic acid + CoASH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-isopropylbut-3-enoyl-CoA thioesterase activity (obsolete GO:0034946)","termid":"GO:0034946"}


id: MONDO:0011291
data:
  {"annotated_genes":["SJAG_03656"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85570],"is_not":false,"summary":null,"term":"MONDO:0011291"}]},"cv_name":"mondo","definition":"A form of congenital disorders of N-linked glycosylation characterized by feeding problems, mild-to-moderate neurologic involvement with hypotonia, poor head control, developmental delay, ataxia, strabismus, and seizures, ranging from febrile convulsions to epilepsy. Retinal degeneration has also been reported. A minority of patients show other manifestations, particularly intestinal (such as protein-losing enteropathy) and liver involvement. The disease is caused by loss of function mutations of the gene ALG6 (1p31.3).","definition_xrefs":["Orphanet:79320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"ALG6-congenital disorder of glycosylation 1C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C126869","UMLS:C2930997","MESH:C535741","OMIM:603147","SCTID:709412006","GARD:9829","MEDGEN:443952","DOID:0080555"],"synonyms":[{"name":"ALG6 congenital disorder of glycosylation","type":"exact"},{"name":"ALG6-CDG","type":"related"},{"name":"ALG6-CDG (CDG-Ic)","type":"exact"},{"name":"ALG6-CDG1C","type":"exact"},{"name":"ALG6-congenital disorder of glycosylation 1C","type":"exact"},{"name":"CDG 1C","type":"related"},{"name":"CDG Ic","type":"related"},{"name":"CDG syndrome type Ic","type":"exact"},{"name":"CDG-Ic","type":"exact"},{"name":"CDG1C","type":"exact"},{"name":"CDGIc","type":"exact"},{"name":"CDGS5 (formerly)","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type Ic","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1C","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type 1 with deficient glycosylation of dolichol-linked oligosaccharide (formerly)","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type I, with deficient glycosylation of dolichol-linked oligosaccharide","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type I, with deficient glycosylation of dolichol-linked oligosaccharide, formerly","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type V","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type V (formerly)","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type V, formerly","type":"related"},{"name":"congenital disorder of glycosylation caused by mutation in ALG6","type":"exact"},{"name":"congenital disorder of glycosylation type 1C","type":"exact"},{"name":"congenital disorder of glycosylation type Ic","type":"exact"},{"name":"congenital disorder of glycosylation, type Ic","type":"related"},{"name":"glucosyltransferase 1 deficiency","type":"exact"}],"termid":"MONDO:0011291","terms_by_termid":{"MONDO:0011291":null},"xrefs":{"Monarch":{"xref_id":"0011291"}}}


id: GO:0016468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + Na+(in) = ADP + phosphate + Na+(out). Found in eukaryotic mitochondria and chloroplasts and in bacteria.","definition_xrefs":["TC:3.A.2.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete sodium-translocating F-type ATPase activity (obsolete GO:0016468)","synonyms":[{"name":"ATP synthase","type":"broad"},{"name":"sodium-translocating F-type ATPase activity","type":"exact"}],"termid":"GO:0016468"}


id: MONDO:0008317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteolytic capacity of plasma","secondary_identifiers":["UMLS:C1867621","MEDGEN:401269","OMIM:176900"],"synonyms":[{"name":"proteolytic capacity of plasma","type":"exact"}],"termid":"MONDO:0008317","xrefs":{"Monarch":{"xref_id":"0008317"}}}


id: GO:0160224
data:
  {"annotated_genes":["SJAG_00459"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109652],"is_not":false,"summary":null,"term":"GO:0160224"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5-methoxy-2-methyl-3-(all-trans-polyprenyl)benzoquinone + NADH + O2 = a 3-demethylubiquinone + NAD+ + H2O.","definition_xrefs":["PMID:38425362","PMID:23445365","RHEA:81211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-demethoxyubiquinone 3-hydroxylase (NADH) activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"5-methoxy-2-methyl-3-(all-trans-polyprenyl)benzoquinone,NADH:oxygen oxidoreductase (5-hydroxylating) activity","type":"exact"}],"termid":"GO:0160224","terms_by_termid":{"GO:0160224":null}}


id: PBO:0004635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal docking protein Pex14","termid":"PBO:0004635"}


id: PBO:0059753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 27","termid":"PBO:0059753"}


id: PBO:0090555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex regulatory subunit Nat1","termid":"PBO:0090555"}


id: GO:0051048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the controlled release of a substance from a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of secretion","synonyms":[{"name":"down regulation of secretion","type":"exact"},{"name":"down-regulation of secretion","type":"exact"},{"name":"downregulation of secretion","type":"exact"},{"name":"inhibition of secretion","type":"narrow"}],"termid":"GO:0051048"}


id: MONDO:0011794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Dravet syndrome (DS) is a genetic epilepsy of childhood characterized by a variety of drug-resistant seizures often induced by fever, presenting in previously healthy children, and which frequently leads to cognitive and motor impairment.","definition_xrefs":["Orphanet:33069"],"gene_count":0,"genotype_count":0,"name":"obsolete Dravet syndrome (obsolete MONDO:0011794)","termid":"MONDO:0011794","xrefs":{"Monarch":{"xref_id":"0011794"}}}


id: MONDO:0859366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 85","secondary_identifiers":["UMLS:C5774302","OMIM:620227","MEDGEN:1824075"],"synonyms":[{"name":"deafness, autosomal dominant 85","type":"narrow"}],"termid":"MONDO:0859366","xrefs":{"Monarch":{"xref_id":"0859366"}}}


id: GO:0120225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.","definition_xrefs":["ISBN:0198547684","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"nucleoside phosphate binding","termid":"GO:1901265"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"coenzyme A binding","synonyms":[{"name":"CoA binding","type":"exact"}],"termid":"GO:0120225"}


id: GO:0015900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of benomyl into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Benomyl, methyl 1-(butylcarbamoyl)-2-benzimidazolecarbamate, is a systemic agricultural fungicide used for control of certain fungal diseases of stone fruit.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete benomyl transport (obsolete GO:0015900)","termid":"GO:0015900"}


id: PBO:0080865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 6","termid":"PBO:0080865"}


id: MONDO:0007791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial hypocalciuric hypercalcemia in which the cause of the disease is a mutation in the CASR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypocalciuric hypercalcemia","termid":"MONDO:0018458"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"familial hypocalciuric hypercalcemia 1","secondary_identifiers":["UMLS:C0342637","Orphanet:93372","MESH:C537145","OMIM:145980","SCTID:704166007","DOID:0060700","MedDRA:10068704","GARD:2796","MEDGEN:137973"],"synonyms":[{"name":"CASR familial hypocalciuric hypercalcemia","type":"exact"},{"name":"FBH1","type":"related"},{"name":"FHH type 1","type":"exact"},{"name":"Fhh1","type":"related"},{"name":"HHC1","type":"exact"},{"name":"familial benign hypercalcemia 1","type":"exact"},{"name":"familial benign hypercalcemia type 1","type":"related"},{"name":"familial hypocalciuric hypercalcemia caused by mutation in CASR","type":"exact"},{"name":"familial hypocalciuric hypercalcemia type 1","type":"exact"},{"name":"familial hypocalciuric hypercalcemia type I","type":"exact"},{"name":"hpocalciuric hypercalcemia, type I","type":"exact"},{"name":"hypercalcemia, familial benign","type":"related"},{"name":"hypercalcemia, familial benign type 1","type":"related"},{"name":"hypocalciuric hypercalcemia type I","type":"exact"},{"name":"hypocalciuric hypercalcemia, acquired","type":"related"},{"name":"hypocalciuric hypercalcemia, familial, type 1","type":"related"},{"name":"hypocalciuric hypercalcemia, familial, type I","type":"related"}],"termid":"MONDO:0007791","xrefs":{"Monarch":{"xref_id":"0007791"}}}


id: PBO:0028623
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U2/U5/U6_snRNP_complex_assembly","termid":"PBO:0028623"}


id: PBO:0090606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3-H4 chaperone, CAF assembly factor (CAF-1) complex subunit A Pcf1","termid":"PBO:0090606"}


id: MONDO:0018902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm arising from the hepatocytes. Grossly, it appears as a soft, round mass which often contains areas of hemorrhage and necrosis. Morphologically, the neoplastic cells resemble normal hepatocytes and form plates separated by sinusoids. Most patients have a history of contraceptive or anabolic steroids use.","definition_xrefs":["NCIT:C3758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"liver and intrahepatic bile duct neoplasm","termid":"MONDO:0024477"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatocellular adenoma","secondary_identifiers":["MESH:D018248","MEDGEN:61655","ONCOTREE:LIAD","Orphanet:54272","UMLS:C0206669","DOID:0050868","EFO:0000762","icd11.foundation:1481070735","GARD:18847","MedDRA:10019827","ICDO:8170/0"],"synonyms":[{"name":"HCA","type":"exact"},{"name":"LIAD","type":"related"},{"name":"adenoma of liver cells","type":"exact"},{"name":"adenoma of the liver cells","type":"exact"},{"name":"adenoma, hepatocellular, benign","type":"exact"},{"name":"hepatocellular adenoma","type":"exact"},{"name":"liver cell adenoma","type":"exact"}],"termid":"MONDO:0018902","xrefs":{"Monarch":{"xref_id":"0018902"}}}


id: GO:0044203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a host cell nucleus, composed of lamin filaments.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"},{"relation_name":"part_of","term_name":"host cell nuclear inner membrane","termid":"GO:0044201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear lamina","termid":"GO:0044203"}


id: PBO:0082859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPPs are multimeric guanine nucleotide-exchange factors for GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); mutation leads to defects in endocytic recycling, block in sporulation/meiosis; mutations in human homolog TRAPPC2 cause spondyloepiphyseal dysplasia tarda, TRAPPC2 can complement yeast null mutant","termid":"PBO:0082859"}


id: MONDO:0005851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune process characterized by the clinical triad of ophthalmoplegia, ataxia, and areflexia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cerebellar disorder","termid":"MONDO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Miller Fisher syndrome","secondary_identifiers":["NCIT:C116958","MEDGEN:95994","icd11.foundation:134795253","GARD:3668","EFO:0007371","MedDRA:10049567","DOID:12889","MESH:D019846","UMLS:C0393799","Orphanet:98919","SCTID:1767005"],"synonyms":[{"name":"Fisher syndrome","type":"exact"},{"name":"Fisher's syndrome","type":"exact"},{"name":"Guillain Barre syndrome, Miller Fisher variant","type":"exact"},{"name":"Guillain-Barre syndrome, Miller Fisher variant","type":"exact"},{"name":"Miller Fisher variant of Guillain Barre syndrome","type":"exact"},{"name":"Miller-Fisher syndrome","type":"exact"},{"name":"Miller-Fisher variant of Guillain-Barre syndrome","type":"exact"},{"name":"cranial variant of GBS","type":"exact"},{"name":"cranial variant of Guillain-Barre syndrome","type":"exact"},{"name":"cranial variant of Guillain-Barré syndrome","type":"exact"},{"name":"ophthalmoplegia, ataxia and areflexia syndrome","type":"exact"},{"name":"syndrome, Fisher","type":"exact"},{"name":"syndrome, Miller Fisher","type":"exact"},{"name":"syndrome, Miller-Fisher","type":"exact"}],"termid":"MONDO:0005851","xrefs":{"Monarch":{"xref_id":"0005851"}}}


id: PBO:0057144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR222/221 cluster host gene","termid":"PBO:0057144"}


id: GO:0097041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phenolic phthiocerol, a phthiocerol derivative having a 4-hydroxyphenyl substituent at the 29-position.","definition_xrefs":["GOC:dph","PMID:9201977","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"phenolic phthiocerol biosynthetic process","synonyms":[{"name":"phenolic phthiocerol anabolism","type":"exact"},{"name":"phenolic phthiocerol biosynthesis","type":"exact"},{"name":"phenolic phthiocerol formation","type":"exact"},{"name":"phenolic phthiocerol synthesis","type":"exact"},{"name":"phenolphthiocerol biosynthesis","type":"exact"}],"termid":"GO:0097041"}


id: PBO:0091095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine hydroxylase/sphingolipid delta-4 desaturase Sur2","termid":"PBO:0091095"}


id: FYPO:0006534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell periphery does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization","termid":"FYPO:0001375"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery","termid":"FYPO:0006533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to cell periphery during nitrogen starvation","synonyms":[{"name":"abolished protein localisation to cell periphery during nitrogen starvation","type":"exact"},{"name":"abolished protein localization to cell periphery during nitrogen depletion","type":"exact"},{"name":"abolished protein localization to cell periphery during nitrogen deprivation","type":"exact"},{"name":"protein absent from cell periphery during nitrogen starvation","type":"related"},{"name":"protein localization to cell periphery abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006534"}


id: GO:0034721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of a methyl group from a trimetylated lysine at position 4 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 demethylation, trimethyl-H3-K4-specific (obsolete GO:0034721)","synonyms":[{"name":"H3K4 demethylation (me3)","type":"exact"},{"name":"histone H3-K4 tridemethylation","type":"related"}],"termid":"GO:0034721"}


id: GO:0052491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the salicylic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont salicylic acid-mediated defense response (obsolete GO:0052491)","synonyms":[{"name":"negative regulation by organism of symbiont salicylic acid-mediated defense response","type":"exact"},{"name":"negative regulation of symbiont SA-mediated defense response","type":"exact"},{"name":"suppression by organism of symbiont salicylic acid-mediated defense response","type":"exact"},{"name":"suppression of symbiont SA mediated defense response","type":"exact"}],"termid":"GO:0052491"}


id: SO:0000091
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from apicoplast sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"apicoplast_sequence","termid":"SO:0000743"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apicoplast_gene","synonyms":[{"name":"apicoplast gene","type":"exact"}],"termid":"SO:0000091"}


id: PR:P54789
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An origin recognition complex subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.15","secondary_identifiers":["UniProtKB:P54789"],"synonyms":[{"name":"SPBC29A10.15","type":"related"},{"name":"Spom972h-ORC1","type":"exact"},{"name":"orp1","type":"related"}],"termid":"PR:P54789"}


id: GO:0004253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of the Leu-Leu bond in synthetic tetradecapeptide renin substrate, producing angiotensin I, but not active on natural angiotensinogen. Also hydrolyzes BZ-Arg-para-nitroanilide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-renin activity (obsolete GO:0004253)","synonyms":[{"name":"gamma-renin activity","type":"exact"}],"termid":"GO:0004253"}


id: MONDO:1012649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of glycogen metabolism that occurs in horses due to a mutation in the GYS1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy, non-human animal","termid":"MONDO:1010196"},{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polysaccharide storage myopathy, type 1, horse","secondary_identifiers":["OMIA:001158-9796"],"synonyms":[{"name":"PSSM1","type":"exact"},{"name":"polysaccharide storage myopathy, GYS1-related, horse","type":"exact"}],"termid":"MONDO:1012649","xrefs":{"Monarch":{"xref_id":"1012649"}}}


id: PBO:0089818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, MBF transcription factor complex subunit Cdc10","termid":"PBO:0089818"}


id: SO:0000048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"To substitute a subsection of sequence for another.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000048 substitute (obsolete SO:0000048)","termid":"SO:0000048"}


id: PR:O94421
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snf22 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF chromatin-remodeling complex subunit snf22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.14c","synonyms":[{"name":"ATP-dependent helicase snf22 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SWI/SNF complex subunit snf22 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-snf22","type":"exact"}],"termid":"PR:O94421"}


id: GO:0120066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within gastric smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the distal part of the pylorus between the pyloric antrum and the pyloric sphincter.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomach pylorus smooth muscle contraction","termid":"GO:0120064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyloric canal smooth muscle contraction","termid":"GO:0120066"}


id: PBO:0082123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acidic protein of the mitochondrial matrix; binds unassembled large subunit proteins during ribosome assembly; subunit of a complex containing Mrx6p, Pim1p, and Pet20p that may regulate mtDNA replication; related to the human complement receptor gC1q-R","termid":"PBO:0082123"}


id: PBO:0030551
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_arginine_import","termid":"PBO:0030551"}


id: GO:0031138
data:
  {"annotated_genes":["SJAG_01401","SJAG_04682","SJAG_02723","SJAG_01084","SJAG_01311","SJAG_00526","SJAG_02266","SJAG_01754","SJAG_01254","SJAG_02444","SJAG_04312","SJAG_01919","SJAG_04394","SJAG_04026","SJAG_02730","SJAG_00145","SJAG_01699","SJAG_00975","SJAG_02426","SJAG_00472","SJAG_02773","SJAG_00600","SJAG_03081","SJAG_03048","SJAG_02592","SJAG_02921"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89134,92417,93546,96725,101962,102704,105268,116953],"is_not":false,"summary":null,"term":"GO:0031138"},{"annotations":[95493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140538"},{"annotations":[106861,107015,106266,114855,94558,102189,106168,115922,93257,116458,88525,107211,91736,94700,104847,100880,109382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010515"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate or frequency of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of conjugation with cellular fusion","termid":"GO:0031137"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00472":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00975":null,"SJAG_01084":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_01919":null,"SJAG_02266":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02921":null,"SJAG_03048":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04394":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"negative regulation of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of conjugation with cellular fusion","type":"exact"},{"name":"down-regulation of conjugation with cellular fusion","type":"exact"},{"name":"downregulation of conjugation with cellular fusion","type":"exact"},{"name":"inhibition of conjugation with cellular fusion","type":"narrow"}],"termid":"GO:0031138","terms_by_termid":{"GO:0010515":null,"GO:0031138":null,"GO:0140538":null}}


id: PBO:0084027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi GDP-mannose transporter; regulates Golgi function and glycosylation in Golgi; VRG4 has a paralog, HVG1, that arose from the whole genome duplication","termid":"PBO:0084027"}


id: PBO:0053585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 608","termid":"PBO:0053585"}


id: GO:0061350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a receptor on the surface of the target cell where activated receptors signal via downstream effectors including C-Jun N-terminal kinase (JNK) to modulate cytoskeletal elements and control cell polarity that contributes to the shaping of the cardiac muscle tissue.","definition_xrefs":["PMID:19056682","GOC:dph","GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete planar cell polarity pathway involved in cardiac muscle tissue morphogenesis (obsolete GO:0061350)","termid":"GO:0061350"}


id: PBO:0069893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1183, pseudogene","termid":"PBO:0069893"}


id: GO:0018530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-6-hydroxynicotine + H2O + O2 = 6-hydroxypseudooxynicotine + H2O2.","definition_xrefs":["RHEA:10012","EC:1.5.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"(R)-6-hydroxynicotine oxidase activity","secondary_identifiers":["UM-BBD_reactionID:r0477","KEGG_REACTION:R07170","MetaCyc:R-6-HYDROXYNICOTINE-OXIDASE-RXN"],"synonyms":[{"name":"(R)-6-hydroxynicotine:oxygen oxidoreductase activity","type":"related"},{"name":"6-hydroxy-D-nicotine oxidase activity","type":"exact"},{"name":"D-6-hydroxynicotine oxidase activity","type":"related"}],"termid":"GO:0018530"}


id: FYPO:0007691
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a DNA strand exchange activator is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:33493431","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal DNA strand exchange activator activity","synonyms":[{"name":"normal RecA-family recombinase activator activity","type":"exact"},{"name":"normal positive regulation of RecA-family recombinase activity","type":"related"}],"termid":"FYPO:0007691"}


id: MONDO:0021896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"spinal cord ischemia","termid":"MONDO:0020688"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior spinal artery stroke","secondary_identifiers":["UMLS:C2931608","MEDGEN:419851","MESH:C537776"],"termid":"MONDO:0021896","xrefs":{"Monarch":{"xref_id":"0021896"}}}


id: FYPO:0006911
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing hexestrol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on hexestrol","synonyms":[{"name":"normal cell population growth in presence of hexestrol","type":"exact"},{"name":"normal cell population growth on hexestrol","type":"exact"},{"name":"normal cellular response to hexestrol","type":"related"},{"name":"normal vegetative cell population growth on hexestrol","type":"exact"}],"termid":"FYPO:0006911"}


id: PBO:0053326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 115","termid":"PBO:0053326"}


id: GO:0030458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK (mating sensu Fungi) (obsolete GO:0030458)","synonyms":[{"name":"activation of MAPKKK (mating sensu Fungi)","type":"exact"}],"termid":"GO:0030458"}


id: GO:0004313
data:
  {"annotated_genes":["SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59948],"is_not":false,"summary":null,"term":"GO:0004313"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + [acyl-carrier protein] = CoA + acetyl-[acyl-carrier protein].","definition_xrefs":["RHEA:41788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetyltransferase activity","termid":"GO:0016418"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"[acyl-carrier-protein] S-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:2.3.1.38","MetaCyc:ACP-S-ACETYLTRANSFER-RXN"],"synonyms":[{"name":"ACAT activity","type":"broad"},{"name":"ACP S-acetyltransferase activity","type":"exact"},{"name":"ACP acetyltransferase activity","type":"related"},{"name":"ACPacetyltransferase activity","type":"related"},{"name":"[acyl-carrier protein] S-acetyltransferase activity","type":"exact"},{"name":"acetyl coenzyme A-acyl-carrier-protein transacylase activity","type":"related"},{"name":"acetyl-CoA:acyl-carrier-protein S-acetyltransferase activity","type":"related"},{"name":"acyl-carrier-protein S-acetyltransferase activity","type":"related"},{"name":"acyl-carrier-protein acetyltransferase activity","type":"related"},{"name":"acyl-carrier-proteinacetyltransferase activity","type":"related"}],"termid":"GO:0004313","terms_by_termid":{"GO:0004313":null}}


id: PBO:0029052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_degradation","termid":"PBO:0029052"}


id: FYPO:0007971
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during mitotic anaphase B in which interpolar microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule occurs at a higher rate, or speed, than normal.","definition_xrefs":["PMID:35293864","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of microtuble polymerization during vegetative growth","termid":"FYPO:0007970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased rate of interpolar microtubule polymerization during mitotic anaphase B","termid":"FYPO:0007971"}


id: MONDO:0025356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"azoospermia, obstructive, with nephrolithiasis","secondary_identifiers":["UMLS:C5542351","OMIM:301060","MEDGEN:1779119"],"synonyms":[{"name":"OAZON","type":"exact"},{"name":"azoospermia, obstructive, with nephrolithiasis, X-linked recessive","type":"exact"}],"termid":"MONDO:0025356","xrefs":{"Monarch":{"xref_id":"0025356"}}}


id: MONDO:0032802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 37","secondary_identifiers":["MEDGEN:1676950","OMIM:618533","UMLS:C4760307"],"synonyms":[{"name":"DEAFNESS, AUTOSOMAL DOMINANT 37","type":"narrow"},{"name":"DFNA37","type":"narrow"},{"name":"deafness, autosomal dominant 37","type":"narrow"}],"termid":"MONDO:0032802","xrefs":{"Monarch":{"xref_id":"0032802"}}}


id: GO:0006247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete TTP reduction (obsolete GO:0006247)","synonyms":[{"name":"TTP reduction","type":"exact"}],"termid":"GO:0006247"}


id: PBO:0067381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 483, pseudogene","termid":"PBO:0067381"}


id: PBO:0017689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aconitate hydratase Aco1 (predicted)","termid":"PBO:0017689"}


id: GO:1905829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of prostaglandin catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:12432938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"regulation of prostaglandin catabolic process","termid":"GO:1905828"},{"relation_name":"negatively_regulates","term_name":"prostaglandin catabolic process","termid":"GO:1905344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of prostaglandin catabolic process","synonyms":[{"name":"down regulation of prostaglandin breakdown","type":"exact"},{"name":"down regulation of prostaglandin catabolic process","type":"exact"},{"name":"down regulation of prostaglandin catabolism","type":"exact"},{"name":"down regulation of prostaglandin degradation","type":"exact"},{"name":"down-regulation of prostaglandin breakdown","type":"exact"},{"name":"down-regulation of prostaglandin catabolic process","type":"exact"},{"name":"down-regulation of prostaglandin catabolism","type":"exact"},{"name":"down-regulation of prostaglandin degradation","type":"exact"},{"name":"downregulation of prostaglandin breakdown","type":"exact"},{"name":"downregulation of prostaglandin catabolic process","type":"exact"},{"name":"downregulation of prostaglandin catabolism","type":"exact"},{"name":"downregulation of prostaglandin degradation","type":"exact"},{"name":"inhibition of prostaglandin breakdown","type":"narrow"},{"name":"inhibition of prostaglandin catabolic process","type":"narrow"},{"name":"inhibition of prostaglandin catabolism","type":"narrow"},{"name":"inhibition of prostaglandin degradation","type":"narrow"},{"name":"negative regulation of prostaglandin breakdown","type":"exact"},{"name":"negative regulation of prostaglandin catabolism","type":"exact"},{"name":"negative regulation of prostaglandin degradation","type":"exact"}],"termid":"GO:1905829"}


id: GO:0006547
data:
  {"annotated_genes":["SJAG_03775","SJAG_00248","SJAG_01137","SJAG_00592","SJAG_01346","SJAG_02400","SJAG_03055","SJAG_04747"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64511,57898,76943,60037,78774,80633,76187,71523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000105"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"imidazole-containing compound metabolic process","termid":"GO:0052803"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"proteinogenic amino acid metabolic process","termid":"GO:0170039"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00248":null,"SJAG_00592":null,"SJAG_01137":null,"SJAG_01346":null,"SJAG_02400":null,"SJAG_03055":null,"SJAG_03775":null,"SJAG_04747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-histidine metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null},"secondary_identifiers":["Wikipedia:Histidine"],"synonyms":[{"name":"histidine metabolic process","type":"broad"},{"name":"histidine metabolism","type":"exact"}],"termid":"GO:0006547","terms_by_termid":{"GO:0000105":null}}


id: MONDO:0009558
data:
  {"annotated_genes":["SJAG_01444"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86014],"is_not":false,"summary":null,"term":"MONDO:0009558"}]},"cv_name":"mondo","definition":"Any Treacher-Collins syndrome in which the cause of the disease is a mutation in the POLR1C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Treacher-Collins syndrome","termid":"MONDO:0002457"},{"relation_name":"is_a","term_name":"POLR1C-related disorder","termid":"MONDO:0700278"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Treacher Collins syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080791","OMIM:248390","MESH:C535707","UMLS:C1855433","GARD:9125","MEDGEN:340868"],"synonyms":[{"name":"POLR1C Treacher-Collins syndrome","type":"exact"},{"name":"TCS3","type":"related"},{"name":"TREACHER COLLINS syndrome 3","type":"related"},{"name":"Treacher Collins syndrome 3","type":"exact"},{"name":"Treacher Collins syndrome type 3","type":"exact"},{"name":"Treacher-Collins syndrome caused by mutation in POLR1C","type":"exact"},{"name":"mandibulofacial dysostosis, Treacher Collins type, autosomal recessive","type":"related"}],"termid":"MONDO:0009558","terms_by_termid":{"MONDO:0009558":null},"xrefs":{"Monarch":{"xref_id":"0009558"}}}


id: PBO:0038387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_active_ingredient","termid":"PBO:0038387"}


id: MONDO:0005943
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with nematodes of the order rhabditida.","definition_xrefs":["MESH:D017196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Nematoda infectious disease","termid":"MONDO:0005871"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhabditida infectious disease","secondary_identifiers":["UMLS:C0162631","MEDGEN:57950"],"synonyms":[{"name":"Rhabditida infection","type":"related"},{"name":"Rhabditida infections","type":"related"},{"name":"infection, Rhabditida","type":"related"},{"name":"infections, Rhabditida","type":"related"}],"termid":"MONDO:0005943","xrefs":{"Monarch":{"xref_id":"0005943"}}}


id: MONDO:0019809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dysfunction of the aortic valve characterized by incomplete valve closure that is present at birth.","definition_xrefs":["NCIT:C103936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic valve insufficiency","termid":"MONDO:0005648"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital aortic valve insufficiency","secondary_identifiers":["Orphanet:95449","ICD9:746.4","MEDGEN:510599","SCTID:28656008","UMLS:C0158617","MedDRA:10010370"],"synonyms":[{"name":"Congential aortic valve insufficiency","type":"exact"},{"name":"congenital aortic insufficiency","type":"exact"},{"name":"congenital insufficiency of aortic valve","type":"exact"}],"termid":"MONDO:0019809","xrefs":{"Monarch":{"xref_id":"0019809"}}}


id: GO:0031406
data:
  {"annotated_genes":["SJAG_03861"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016594"}]},"cv_name":"molecular_function","definition":"Binding to a carboxylic acid, an organic acid containing one or more carboxyl (COOH) groups or anions (COO-).","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"organic acid binding","termid":"GO:0043177"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"carboxylic acid binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031406","terms_by_termid":{"GO:0016594":null}}


id: PBO:0076954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB2 overlapping transcript 1","termid":"PBO:0076954"}


id: PBO:0034137
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_regulates","termid":"PBO:0034137"}


id: GO:0002134
data:
  {"annotated_genes":["SJAG_03453","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91186,92007],"is_not":false,"summary":null,"term":"GO:0002134"}]},"cv_name":"molecular_function","definition":"Binding to UTP, uridine 5'-triphosphate.","definition_xrefs":["GOC:hjd","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide binding","termid":"GO:0032557"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"UTP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0002134","terms_by_termid":{"GO:0002134":null}}


id: PBO:0013103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MADS-box transcription factor Pvg4","termid":"PBO:0013103"}


id: PBO:0017441
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_expression_of","termid":"PBO:0017441"}


id: PBO:0052294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain containing 3 like, subcortical maternal complex member","termid":"PBO:0052294"}


id: PBO:0044474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 17 subfamily A member 1","termid":"PBO:0044474"}


id: MONDO:0009991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Rh deficiency syndrome (obsolete MONDO:0009991)","termid":"MONDO:0009991","xrefs":{"Monarch":{"xref_id":"0009991"}}}


id: PBO:0055969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRR binding FLII interacting protein 1 pseudogene 1","termid":"PBO:0055969"}


id: PBO:0078204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-6","termid":"PBO:0078204"}


id: PBO:0030506
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_PPT","termid":"PBO:0030506"}


id: MONDO:0045072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal secretion of hormones in conjunction with neoplastic growth occurring anywhere in the body.","definition_xrefs":["NCIT:C4065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic syndrome","termid":"MONDO:0021058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectopic hormone secretion syndrome associated with neoplasia","secondary_identifiers":["MEDGEN:208863","UMLS:C0851689"],"synonyms":[{"name":"ectopic hormone secretion syndrome associated with neoplasia","type":"exact"},{"name":"neoplasm associated ectopic hormone secretion syndrome","type":"exact"}],"termid":"MONDO:0045072","xrefs":{"Monarch":{"xref_id":"0045072"}}}


id: MONDO:0000487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multifocal dystonia that involves the arm and leg on the same side of the body.","definition_xrefs":["DOID:0050846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multifocal dystonia","termid":"MONDO:0000478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"hemidystonia","secondary_identifiers":["UMLS:C1960561","SCTID:427232004","MEDGEN:743329","ICD9:333.99"],"termid":"MONDO:0000487","xrefs":{"Monarch":{"xref_id":"0000487"}}}


id: PBO:0053985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1301","termid":"PBO:0053985"}


id: GO:0044530
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Multicomponent complex of RNA and proteins that is composed of four active spliceosomes, termed native spliceosomes, connected to each other by the pre-mRNA. The supraspliceosome is the nuclear machine where the pre-mRNA processing takes place, like the 5'-end capping, 3'-end cleavage, splicing and editing.","definition_xrefs":["PMID:19282290","GOC:ans","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"supraspliceosomal complex","synonyms":[{"name":"supraspliceosome complex","type":"exact"}],"termid":"GO:0044530"}


id: PBO:0075417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 4","termid":"PBO:0075417"}


id: PBO:0063595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 10","termid":"PBO:0063595"}


id: MONDO:0003227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Impaired ability to recognize other human faces in the absence of a vision disorder. It may be a congenital disorder or the result of brain injury.","definition_xrefs":["NCIT:C85031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prosopagnosia","secondary_identifiers":["DOID:4970","icd11.foundation:858616900","MEDGEN:65884","MESH:D020238","UMLS:C0234512","HP:0010528"],"synonyms":[{"name":"face blindness","type":"exact"},{"name":"prosopagnosia","type":"exact"},{"name":"prosopagnosia (disease)","type":"exact"}],"termid":"MONDO:0003227","xrefs":{"Monarch":{"xref_id":"0003227"}}}


id: PBO:0077662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 10c","termid":"PBO:0077662"}


id: PBO:0034655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_centromere_during_vegetative_growth","termid":"PBO:0034655"}


id: MONDO:0018147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, acquired, eye disease characterized by progressive visual loss, due to bilateral juxtafoveolar capillary occlusions, capillary telangiectasia, and minimal exudation. It is associated with systemic or cerebral vascular occlusive disease.","definition_xrefs":["Orphanet:353351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"idiopathic macular telangiectasia type 3","secondary_identifiers":["UMLS:C4751436","MEDGEN:1658435","GARD:21532","ICD10CM:H35.5"],"synonyms":[{"name":"occlusive idiopathic juxtafoveolar retinal telangiectasis","type":"exact"}],"termid":"MONDO:0018147","xrefs":{"Monarch":{"xref_id":"0018147"}}}


id: MONDO:0001415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Loss of testicular volume.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular disorder","termid":"MONDO:0002329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrophy of testis","secondary_identifiers":["ICD9:608.3","ICD10CM:N50.0","MEDGEN:57626","DOID:11994","icd11.foundation:1735709719","SCTID:17585008","UMLS:C0156312","NCIT:C123259"],"synonyms":[{"name":"testicular atrophy","type":"exact"}],"termid":"MONDO:0001415","xrefs":{"Monarch":{"xref_id":"0001415"}}}


id: GO:0030647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an aminoglycoside antibiotic, any member of a group of broad spectrum antibiotics, of similar toxicity and pharmacology, that contain an aminodeoxysugar, an amino- or guanidino-substituted inositol ring, and one or more residues of other sugars. The group includes streptomycin, neomycin, framycetin, kanamycin, paromomycin, and gentamicin.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycoside antibiotic metabolic process","synonyms":[{"name":"aminoglycoside antibiotic metabolism","type":"exact"}],"termid":"GO:0030647"}


id: GO:0019498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of n-octane to octanoyl-CoA.","definition_xrefs":["MetaCyc:P221-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"n-octane metabolic process","termid":"GO:0018939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"n-octane oxidation","termid":"GO:0019498"}


id: PBO:0079656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 4","termid":"PBO:0079656"}


id: GO:0009228
data:
  {"annotated_genes":["SJAG_02406","SJAG_04067","SJAG_01970","SJAG_00827","SJAG_02421","SJAG_03362","SJAG_04282","SJAG_02420","SJAG_03538","SJAG_00381","SJAG_04866"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61749,70555,74295,74374,77495,78761],"is_not":false,"summary":null,"term":"GO:0009228"},{"annotations":[89361,114066],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[99861,110820,110819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiamine metabolic process","termid":"GO:0006772"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"thiamine-containing compound biosynthetic process","termid":"GO:0042724"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01970":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"thiamine biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:THISYN-PWY"],"synonyms":[{"name":"thiamin anabolism","type":"exact"},{"name":"thiamin biosynthetic process","type":"exact"},{"name":"thiamine biosynthesis","type":"exact"},{"name":"thiamine formation","type":"exact"},{"name":"thiamine synthesis","type":"exact"},{"name":"vitamin B1 biosynthesis","type":"exact"},{"name":"vitamin B1 biosynthetic process","type":"exact"}],"termid":"GO:0009228","terms_by_termid":{"GO:0009228":null,"GO:0036172":null,"GO:0090180":null}}


id: MONDO:0004967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukemia with an acute onset, characterized by the presence of lymphoblasts in the bone marrow and the peripheral blood. It includes the acute B lymphoblastic leukemia and acute T lymphoblastic leukemia.","definition_xrefs":["NCIT:C3167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"precursor lymphoblastic lymphoma/leukemia","termid":"MONDO:0003538"},{"relation_name":"is_a","term_name":"neoplasm of immature B and T cells","termid":"MONDO:0005168"},{"relation_name":"is_a","term_name":"lymphoid leukemia","termid":"MONDO:0005402"},{"relation_name":"is_a","term_name":"acute leukemia","termid":"MONDO:0010643"},{"relation_name":"is_a","term_name":"non-Hodgkin lymphoma","termid":"MONDO:0018908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acute lymphoblastic leukemia","secondary_identifiers":["ICD9:204.0","ICD9:204.00","DOID:9952","GARD:522","HP:0006721","ICD9:204.9","Orphanet:513","UMLS:C0023449","SCTID:91857003","EFO:0000220","ICDO:9835/3","MEDGEN:7317","ICD9:204"],"synonyms":[{"name":"ALL","type":"exact"},{"name":"ALL - acute lymphocytic leukaemia","type":"exact"},{"name":"ALL - acute lymphocytic leukemia","type":"exact"},{"name":"acute lymphoblastic leukaemia (ALL)","type":"exact"},{"name":"acute lymphoblastic leukaemia (disease)","type":"exact"},{"name":"acute lymphoblastic leukemia","type":"exact"},{"name":"acute lymphoblastic leukemia (ALL)","type":"exact"},{"name":"acute lymphoblastic leukemia (disease)","type":"exact"},{"name":"acute lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"acute lymphocytic leukaemia","type":"exact"},{"name":"acute lymphocytic leukemia","type":"exact"},{"name":"acute lymphocytic leukemias","type":"exact"},{"name":"acute lymphogenous leukaemia","type":"exact"},{"name":"acute lymphogenous leukemia","type":"exact"},{"name":"acute lymphoid leukaemia","type":"exact"},{"name":"acute lymphoid leukemia","type":"exact"},{"name":"leukemia, lymphoblastic, malignant","type":"exact"},{"name":"lymphoblastic leukaemia","type":"broad"},{"name":"lymphoblastic leukemia","type":"broad"},{"name":"lymphoblastic leukemia, acute","type":"exact"},{"name":"precursor Lymphoblasic leukaemia","type":"exact"},{"name":"precursor Lymphoblasic leukemia","type":"exact"},{"name":"precursor cell lymphoblastic leukaemia","type":"exact"},{"name":"precursor cell lymphoblastic leukemia","type":"exact"},{"name":"precursor lymphoblastic leukaemia","type":"exact"},{"name":"precursor lymphoblastic leukemia","type":"exact"}],"termid":"MONDO:0004967","xrefs":{"Monarch":{"xref_id":"0004967"}}}


id: GO:0016890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of ester linkages at specific sites within a deoxyribonucleic acid molecule by creating internal breaks.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete site-specific endodeoxyribonuclease activity, specific for altered base (obsolete GO:0016890)","termid":"GO:0016890"}


id: GO:0034428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the mRNA transcript body that occurs when the 5' end is not protected by a 5'-cap; degradation proceeds in the 5' to 3' direction.","definition_xrefs":["GOC:krc","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 5'-3' (obsolete GO:0034428)","termid":"GO:0034428"}


id: GO:0047782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + coniferin = D-glucose + coniferol.","definition_xrefs":["EC:3.2.1.126","MetaCyc:CONIFERIN-BETA-GLUCOSIDASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"coniferin beta-glucosidase activity","secondary_identifiers":["RHEA:12252"],"synonyms":[{"name":"coniferin b-glucosidase activity","type":"exact"},{"name":"coniferin beta-D-glucosidase activity","type":"related"},{"name":"coniferin-hydrolyzing beta-glucosidase activity","type":"related"}],"termid":"GO:0047782"}


id: MONDO:0018613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"AH amyloidosis","secondary_identifiers":["Orphanet:442582","GARD:21847","MEDGEN:1684787","DOID:0080934","icd11.foundation:1511136608","NCIT:C158962","UMLS:C5204115"],"synonyms":[{"name":"heavy chain amyloidosis","type":"exact"}],"termid":"MONDO:0018613","xrefs":{"Monarch":{"xref_id":"0018613"}}}


id: PBO:0048815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 4","termid":"PBO:0048815"}


id: PBO:0029238
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitosis_with_unreplicated_DNA","termid":"PBO:0029238"}


id: GO:0003717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that brings about termination of transcription by RNA polymerase II.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcription termination factor activity (obsolete GO:0003717)","synonyms":[{"name":"Pol II transcription termination factor activity","type":"exact"},{"name":"RNA polymerase II transcription termination factor activity","type":"exact"}],"termid":"GO:0003717"}


id: GO:0099055
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic membrane (obsolete GO:0099055)","termid":"GO:0099055"}


id: PBO:0029697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_vegetative_cell,_septa_grouped","termid":"PBO:0029697"}


id: PBO:0084248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inosine monophosphate dehydrogenase; catalyzes the rate-limiting step in GTP biosynthesis, expression is induced by mycophenolic acid resulting in resistance to the drug, expression is repressed by nutrient limitation; IMD2 has a paralog, YAR073W/YAR075W, that arose from a segmental duplication","termid":"PBO:0084248"}


id: PBO:0055280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2707","termid":"PBO:0055280"}


id: PBO:0040887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMP8B antisense RNA 1","termid":"PBO:0040887"}


id: PBO:0086996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag","termid":"PBO:0086996"}


id: GO:0002750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Antigen processing and presentation which is initiated by uptake of antigen via macropinocytosis.","definition_xrefs":["GOC:add","PMID:16556257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation following pinocytosis","termid":"GO:0002746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation following macropinocytosis","termid":"GO:0002750"}


id: GO:0072718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cisplatin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cisplatin","termid":"GO:0072718"}


id: PBO:0056915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MINDY lysine 48 deubiquitinase 1","termid":"PBO:0056915"}


id: GO:0042208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propylene, an alkene produced by catalytic or thermal cracking of hydrocarbons or as a by-product of petroleum refining.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propylene metabolic process","termid":"GO:0018964"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"alkene catabolic process","termid":"GO:0043451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"propylene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:pro"],"synonyms":[{"name":"propylene breakdown","type":"exact"},{"name":"propylene catabolism","type":"exact"},{"name":"propylene degradation","type":"exact"}],"termid":"GO:0042208"}


id: GO:0086029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a Purkinje myocyte to a ventricular cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cardiac conduction","termid":"GO:0086019"},{"relation_name":"is_a","term_name":"Purkinje myocyte to ventricular cardiac muscle cell communication","termid":"GO:0086068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Purkinje myocyte to ventricular cardiac muscle cell signaling","synonyms":[{"name":"Purkinje myocyte to ventricular cardiac muscle cell signalling","type":"exact"}],"termid":"GO:0086029"}


id: FYPO:0005136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which generation of double-strand breaks at defined hotspots throughout the genome during meiosis I is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","GO:0042138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic DNA double-strand break formation","termid":"FYPO:0005136"}


id: PATO:0001265
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of blue hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blue","termid":"PATO:0000318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated blue","synonyms":[{"name":"bright blue","type":"related"}],"termid":"PATO:0001265"}


id: PBO:0030702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0030702"}


id: PBO:0056844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoglyceride lipase","termid":"PBO:0056844"}


id: MONDO:0017734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sialidosis is a lysosomal storage disease, belonging to the group of oligosaccharidoses or glycoproteinoses, with a wide clinical spectrum that is divided into two main clinical subtypes: sialidosis type I, the milder, non dysmorphic form of the disease characterized by gait abnormalities, progressive visual loss, bilateral macular cherry red spots and myoclonus, that presents in adolescence or adulthood (second or third decade of life); and sialidosis type II the more severe, early onset form, characterized by a progressive and severe mucopolysaccharidosis-like phenotype with coarse facies, visceromegaly, dysostosis multiplex, and developmental delay. Bilateral macular cherry red spots are also present. Sialidosis type II has been further divided into congenital (with hydrops fetalis), infantile and juvenile presentations.","definition_xrefs":["Orphanet:309294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharidosis","termid":"MONDO:0019251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0002561"],"is_obsolete":false,"name":"sialidosis","secondary_identifiers":["UMLS:C0268226","NANDO:2200556","MedDRA:10058800","NANDO:1200116","SCTID:38795005","icd11.foundation:1180347697","GARD:21331","MEDGEN:120621","NORD:1713"],"termid":"MONDO:0017734","xrefs":{"Monarch":{"xref_id":"0017734"}}}


id: SO:0000799
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposable_element that is engineered and foreign.","definition_xrefs":["FB:mc"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"foreign_transposable_element","termid":"SO:0000720"},{"relation_name":"is_a","term_name":"engineered_transposable_element","termid":"SO:0000798"},{"relation_name":"is_a","term_name":"engineered_foreign_region","termid":"SO:0000805"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_foreign_transposable_element","synonyms":[{"name":"engineered foreign transposable element","type":"exact"}],"termid":"SO:0000799"}


id: PBO:0062163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 4 pseudogene","termid":"PBO:0062163"}


id: PBO:0034647
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_bleomycin","termid":"PBO:0034647"}


id: PBO:0016900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam1","termid":"PBO:0016900"}


id: PBO:0057459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 578","termid":"PBO:0057459"}


id: PBO:0048405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAS8 antisense RNA 1","termid":"PBO:0048405"}


id: PBO:0072441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 5","termid":"PBO:0072441"}


id: GO:0097072
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An interferon regulatory factor complex that consists of a homodimer of interferon regulatory factor 3.","definition_xrefs":["PMID:14556004","GOC:cna","PMID:12855817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon regulatory factor complex","termid":"GO:0097071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interferon regulatory factor 3 complex","synonyms":[{"name":"IRF3:IRF3 complex","type":"exact"}],"termid":"GO:0097072"}


id: GO:0140201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of urea from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:17218313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea transmembrane transport","termid":"GO:0071918"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"urea import across plasma membrane","termid":"GO:0140201"}


id: FYPO:0003705
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to trapoxin A. Cells stop growing (and may die) at a concentration of trapoxin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to trapoxin A","synonyms":[{"name":"hypersensitive to trapoxin A","type":"exact"},{"name":"sensitive to trapoxin A during mitotic cell cycle","type":"related"},{"name":"sensitive to trapoxin A during vegetative growth","type":"exact"}],"termid":"FYPO:0003705"}


id: PBO:0016952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA Meu16","termid":"PBO:0016952"}


id: GO:0034488
data:
  {"annotated_genes":["SJAG_00051"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90720],"is_not":false,"summary":null,"term":"GO:0034488"}]},"cv_name":"biological_process","definition":"The directed movement of basic amino acids out of the vacuole, across the vacuolar membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane export from vacuole","termid":"GO:0032974"},{"relation_name":"is_a","term_name":"vacuolar amino acid transmembrane transport","termid":"GO:0034487"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transport","termid":"GO:1990822"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00051":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"basic amino acid transmembrane export from vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034488","terms_by_termid":{"GO:0034488":null}}


id: PBO:0057124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 208a","termid":"PBO:0057124"}


id: PBO:0065329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 53","termid":"PBO:0065329"}


id: PBO:0056468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAST4 antisense RNA 1","termid":"PBO:0056468"}


id: PBO:0055455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2887","termid":"PBO:0055455"}


id: PBO:0055543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2979","termid":"PBO:0055543"}


id: PBO:0067704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 2","termid":"PBO:0067704"}


id: GO:0090176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins and contributes to the establishment of planar polarity.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"part_of","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"microtubule cytoskeleton organization involved in establishment of planar polarity","synonyms":[{"name":"microtubule cytoskeleton organisation involved in establishment of planar polarity","type":"exact"}],"termid":"GO:0090176"}


id: PBO:0050446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein U","termid":"PBO:0050446"}


id: GO:0140568
data:
  {"annotated_genes":["SJAG_04203","SJAG_01435"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140569"},{"annotations":[75065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140570"}]},"cv_name":"biological_process","definition":"The removal of a mislocalized protein from a cellular membrane.","definition_xrefs":["PMID:32973005","PMID:24821790","PMID:28712723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01435":null,"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"extraction of mislocalized protein from membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140568","terms_by_termid":{"GO:0140569":null,"GO:0140570":null}}


id: PBO:0075904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5","termid":"PBO:0075904"}


id: PBO:0069694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 973, pseudogene","termid":"PBO:0069694"}


id: PBO:0034142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_regulogy_relationship_with","termid":"PBO:0034142"}


id: MONDO:0002876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant mixed epithelial and mesenchymal neoplasm that arises from the cervix and is characterized by the presence of malignant mesenchymal elements and benign epithelial elements.","definition_xrefs":["NCIT:C40229"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cervical carcinosarcoma","termid":"MONDO:0002877"},{"relation_name":"is_a","term_name":"adenosarcoma","termid":"MONDO:0005636"},{"relation_name":"is_a","term_name":"malignant mixed epithelial and mesenchymal tumor of cervix uteri","termid":"MONDO:0016277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical adenosarcoma","secondary_identifiers":["DOID:4111","GARD:20492","ICD10CM:C53.0","MEDGEN:308948","SCTID:764847000","UMLS:C1516426","Orphanet:213792"],"synonyms":[{"name":"adenosarcoma of the cervix uteri","type":"exact"},{"name":"adenosarcoma of uterine cervix","type":"exact"},{"name":"cervical Muellerian adenosarcoma","type":"exact"},{"name":"cervical Mullerian adenosarcoma","type":"exact"},{"name":"cervical Müllerian adenosarcoma","type":"exact"},{"name":"cervical adenosarcoma","type":"exact"},{"name":"uterine cervix adenosarcoma","type":"exact"}],"termid":"MONDO:0002876","xrefs":{"Monarch":{"xref_id":"0002876"}}}


id: GO:0018796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4,5-dihydroxyphthalate = 3,4-dihydroxybenzoate + CO2.","definition_xrefs":["EC:4.1.1.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4,5-dihydroxyphthalate decarboxylase activity","secondary_identifiers":["RHEA:24184","UM-BBD_enzymeID:r0149","MetaCyc:45-DIHYDROXYPHTHALATE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"4,5-dihydroxyphthalate carboxy-lyase (3,4-dihydroxybenzoate-forming)","type":"related"},{"name":"4,5-dihydroxyphthalate carboxy-lyase activity","type":"related"}],"termid":"GO:0018796"}


id: PBO:0057862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3173","termid":"PBO:0057862"}


id: PBO:0027564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_frequency_of_meiosis_II","termid":"PBO:0027564"}


id: PBO:0004896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ/TPR domain protein DNAJC7 family","termid":"PBO:0004896"}


id: GO:0106373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-deoxyglucosone + H2O + NAD+ = 2-dehydro-3-deoxy-D-gluconate + 2 H+ + NADH.","definition_xrefs":["PMID:17175089","RHEA:67244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-deoxyglucosone dehydrogenase activity","termid":"GO:0106373"}


id: PBO:0057162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 320a","termid":"PBO:0057162"}


id: GO:0075530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a virus establishes a latent state within its host as an episome, where the viral genome remains silent in the cytoplasm or nucleus as linear structure.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of episomal latency","termid":"GO:0075720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of latency as a linear episome","synonyms":[{"name":"establishment of latency as a linear plasmid","type":"exact"},{"name":"establishment of linear plasmid latency","type":"exact"}],"termid":"GO:0075530"}


id: MONDO:0004764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"enthesopathy","termid":"MONDO:0002183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibular collateral ligament bursitis","secondary_identifiers":["DOID:9358","SCTID:77323000","MEDGEN:510512","UMLS:C0158316","ICD9:726.63"],"termid":"MONDO:0004764","xrefs":{"Monarch":{"xref_id":"0004764"}}}


id: GO:0005907
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete HA1 clathrin adaptor (obsolete GO:0005907)","synonyms":[{"name":"AP1","type":"related"},{"name":"HA1 clathrin adaptor","type":"exact"}],"termid":"GO:0005907"}


id: MONDO:0015495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete otomandibular dysplasia associated with monogenic syndromes (obsolete MONDO:0015495)","secondary_identifiers":["Orphanet:156202"],"termid":"MONDO:0015495","xrefs":{"Monarch":{"xref_id":"0015495"}}}


id: PBO:0046017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 alpha kinase 3","termid":"PBO:0046017"}


id: PBO:0064629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisome proliferator activated receptor alpha","termid":"PBO:0064629"}


id: GO:0019210
data:
  {"annotated_genes":["SJAG_03931","SJAG_01821","SJAG_01118","SJAG_03974","SJAG_01210","SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[109265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[76265,107379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004860"},{"annotations":[118441,108777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"kinase regulator activity","termid":"GO:0019207"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01118":null,"SJAG_01210":null,"SJAG_01245":null,"SJAG_01821":null,"SJAG_03931":null,"SJAG_03974":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"}],"interesting_parent_ids":["GO:0004857","GO:0098772","GO:0030234","GO:0140678","GO:0003674"],"is_obsolete":false,"name":"kinase inhibitor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0019210","terms_by_termid":{"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0030291":null}}


id: FYPO:0001131
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[120005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"},{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin","termid":"FYPO:0004718"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01050","SJAG_03892"],"name":"abnormal protein localization to heterochromatin during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abnormal protein localisation to heterochromatin during vegetative growth","type":"exact"},{"name":"abnormal protein localization to heterochromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001131","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: GO:0016020
data:
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id: PBO:0044553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein like 1","termid":"PBO:0044553"}


id: MONDO:1010007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Subvalvular aortic stenosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subvalvular aortic stenosis, non-human animal","secondary_identifiers":["OMIA:000052"],"termid":"MONDO:1010007","xrefs":{"Monarch":{"xref_id":"1010007"}}}


id: MONDO:0009938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital pulmonary valve stenosis","termid":"MONDO:0017865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonic stenosis","secondary_identifiers":["OMIM:265500","UMLS:C1956257","MEDGEN:408291","GARD:10071","HP:0001642"],"synonyms":[{"name":"pulmonary stenosis","type":"exact"},{"name":"pulmonic stenosis","type":"exact"},{"name":"pulmonic stenosis (disease)","type":"exact"},{"name":"valvular pulmonic stenosis","type":"related"}],"termid":"MONDO:0009938","xrefs":{"Monarch":{"xref_id":"0009938"}}}


id: MONDO:0017230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"familial partial lipodystrophy","termid":"MONDO:0020088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"autosomal semi-dominant severe lipodystrophic laminopathy","secondary_identifiers":["GARD:21080","Orphanet:280365","MEDGEN:1808090","UMLS:C5680783"],"termid":"MONDO:0017230","xrefs":{"Monarch":{"xref_id":"0017230"}}}


id: PBO:0056707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MELTF antisense RNA 1","termid":"PBO:0056707"}


id: GO:2000245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of Ftsz-dependent cytokinesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokinesis","termid":"GO:0032466"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"is_a","term_name":"regulation of FtsZ-dependent cytokinesis","termid":"GO:2000244"},{"relation_name":"negatively_regulates","term_name":"FtsZ-dependent cytokinesis","termid":"GO:0043093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of FtsZ-dependent cytokinesis","synonyms":[{"name":"negative regulation of prokaryote-type cytokinesis","type":"related"},{"name":"negative regulation of prokaryotic fission","type":"related"}],"termid":"GO:2000245"}


id: PBO:0069489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 756, pseudogene","termid":"PBO:0069489"}


id: GO:2001060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a D-glycero-D-manno-heptose 7-phosphate.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-glycero-D-manno-heptose 7-phosphate metabolic process","synonyms":[{"name":"D-glycero-D-manno-heptose 7-phosphate metabolism","type":"exact"}],"termid":"GO:2001060"}


id: PBO:0069118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 367, pseudogene","termid":"PBO:0069118"}


id: PBO:0030168
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_lysis","termid":"PBO:0030168"}


id: PR:Q8NIL4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.05 gene.","definition_xrefs":["UniProtKB:Q8NIL4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB21E7.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.05","synonyms":[{"name":"Spom972h-SPBPB21E7.05","type":"exact"}],"termid":"PR:Q8NIL4"}


id: PR:Q9UUF1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A deoxyribonuclease TATDN1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02854","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease Tat-D (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.08","secondary_identifiers":["UniProtKB:Q9UUF1"],"synonyms":[{"name":"Spom972h-TATDN1","type":"exact"}],"termid":"PR:Q9UUF1"}


id: SO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match to an EST or cDNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed_sequence_match","synonyms":[{"name":"expressed sequence match","type":"exact"}],"termid":"SO:0000102"}


id: PBO:0064087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol transfer protein beta","termid":"PBO:0064087"}


id: PBO:0040764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 2","termid":"PBO:0040764"}


id: PBO:0071185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 26","termid":"PBO:0071185"}


id: PBO:0058713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6841","termid":"PBO:0058713"}


id: MONDO:1012625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any X-linked tremor that occurs in rabbits due to a mutation in the PLP1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tremor, non-human animal","termid":"MONDO:1011861"},{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked paralytic tremor, PLP1-related, rabbit","secondary_identifiers":["OMIA:000770-9986"],"synonyms":[{"name":"PT","type":"exact"},{"name":"tremor, X-linked, rabbit","type":"related"}],"termid":"MONDO:1012625","xrefs":{"Monarch":{"xref_id":"1012625"}}}


id: CHEBI:31823
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A mercury coordination entity made up of linear triatomic molecules in which a mercury atom is bonded to two chlorines","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercury dichloride","termid":"CHEBI:31823"}


id: PBO:0041588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 3","termid":"PBO:0041588"}


id: PBO:0068311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF13 pseudogene 1","termid":"PBO:0068311"}


id: GO:0047907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-2-(2-furyl)-3-(5-nitro-2-furyl)acrylamide = (Z)-2-(2-furyl)-3-(5-nitro-2-furyl)acrylamide.","definition_xrefs":["RHEA:21848","EC:5.2.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"furylfuramide isomerase activity","secondary_identifiers":["KEGG_REACTION:R04538","MetaCyc:FURYLFURAMIDE-ISOMERASE-RXN"],"synonyms":[{"name":"2-(2-furyl)-3-(5-nitro-2-furyl)acrylamide cis-trans-isomerase activity","type":"related"}],"termid":"GO:0047907"}


id: PBO:0005337
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial disorders","termid":"PBO:0005337"}


id: GO:0030250
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of guanylate cyclase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activator activity","termid":"GO:0010853"},{"relation_name":"is_a","term_name":"guanylate cyclase regulator activity","termid":"GO:0030249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0030234","GO:0098772"],"is_obsolete":false,"name":"guanylate cyclase activator activity","synonyms":[{"name":"guanylin","type":"narrow"}],"termid":"GO:0030250"}


id: MONDO:0054750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotrophic lateral sclerosis, susceptibility to, 24","secondary_identifiers":["MEDGEN:1632999","UMLS:C4693523","OMIM:617892","DOID:0081378"],"synonyms":[{"name":"ALS24","type":"related"},{"name":"amyotrophic lateral sclerosis, susceptibility to, 24","type":"exact"}],"termid":"MONDO:0054750","xrefs":{"Monarch":{"xref_id":"0054750"}}}


id: MONDO:1011509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gaucher disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Gaucher disease, non-human animal","termid":"MONDO:1011431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gaucher disease, sheep","secondary_identifiers":["OMIA:000405-9940"],"termid":"MONDO:1011509","xrefs":{"Monarch":{"xref_id":"1011509"}}}


id: MONDO:0013322
data:
  {"annotated_genes":["SJAG_03657"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87533],"is_not":false,"summary":null,"term":"MONDO:0013322"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign adult familial myoclonic epilepsy","termid":"MONDO:0019448"},{"relation_name":"is_a","term_name":"epilepsy, familial adult myoclonic","termid":"MONDO:0000160"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03657":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial adult myoclonic, 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18084","UMLS:C3150860","MESH:C567098","OMIM:613608","MEDGEN:462210","DOID:0111695"],"synonyms":[{"name":"FAME3","type":"exact"},{"name":"cortical myoclonic tremor with epilepsy, familial, 3","type":"related"},{"name":"epilepsy, familial ADULT myoclonic, 3","type":"related"}],"termid":"MONDO:0013322","terms_by_termid":{"MONDO:0013322":null},"xrefs":{"Monarch":{"xref_id":"0013322"}}}


id: PBO:0077091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 6","termid":"PBO:0077091"}


id: PBO:0086442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative lipase; involved in lipid metabolism; not an essential gene; YDL109C has a paralog, ROG1, that arose from the whole genome duplication","termid":"PBO:0086442"}


id: PBO:0080419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 3","termid":"PBO:0080419"}


id: PBO:0044384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily A member 7 pseudogene 1","termid":"PBO:0044384"}


id: MONDO:0002090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a eccrine sweat gland.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sweat gland neoplasm","termid":"MONDO:0002381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"eccrine sweat gland neoplasm","secondary_identifiers":["NCIT:C6796","MEDGEN:234213","DOID:173","UMLS:C1333371"],"synonyms":[{"name":"eccrine neoplasm","type":"exact"},{"name":"eccrine neoplasm of skin","type":"exact"},{"name":"eccrine neoplasm of the skin","type":"exact"},{"name":"eccrine skin neoplasm","type":"exact"},{"name":"eccrine skin tumor","type":"exact"},{"name":"eccrine skin tumour","type":"exact"},{"name":"eccrine sweat gland neoplasm (disease)","type":"exact"},{"name":"eccrine sweat gland tumor","type":"exact"},{"name":"eccrine sweat gland tumour","type":"exact"},{"name":"eccrine tumor","type":"exact"},{"name":"eccrine tumor of skin","type":"exact"},{"name":"eccrine tumor of the skin","type":"exact"},{"name":"eccrine tumour","type":"exact"},{"name":"eccrine tumour of skin","type":"exact"},{"name":"eccrine tumour of the skin","type":"exact"},{"name":"neoplasm of eccrine sweat gland","type":"exact"},{"name":"tumor of eccrine sweat gland","type":"exact"},{"name":"tumour of eccrine sweat gland","type":"exact"}],"termid":"MONDO:0002090","xrefs":{"Monarch":{"xref_id":"0002090"}}}


id: GO:0007073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase I promoter as the cell leaves M phase. M phase is the part of the mitotic cell cycle during which mitosis and cytokinesis take place.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in exit from mitosis, from RNA polymerase I promoter (obsolete GO:0007073)","synonyms":[{"name":"activation of transcription on exit from mitosis, from Pol I promoter","type":"narrow"},{"name":"activation of transcription on exit from mitosis, from RNA polymerase I promoter","type":"narrow"}],"termid":"GO:0007073"}


id: FYPO:0007431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mutations occur at a higher or lower rate than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"altered mutation rate","synonyms":[{"name":"abnormal mutation rate","type":"exact"},{"name":"altered mutation rate during mitotic cell cycle","type":"related"},{"name":"altered mutation rate during vegetative growth","type":"exact"}],"termid":"FYPO:0007431"}


id: GO:0034236
data:
  {"annotated_genes":["SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71358],"is_not":false,"summary":null,"term":"GO:0034236"}]},"cv_name":"molecular_function","definition":"Binding to one or both of the catalytic subunits of protein kinase A.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"},{"relation_name":"is_a","term_name":"protein kinase A binding","termid":"GO:0051018"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protein kinase A catalytic subunit binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PKA catalytic subunit binding","type":"exact"}],"termid":"GO:0034236","terms_by_termid":{"GO:0034236":null}}


id: PR:Q9P4W9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps403 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P4W9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S4-C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.07","synonyms":[{"name":"Spom972h-rps403","type":"exact"}],"termid":"PR:Q9P4W9"}


id: PBO:0044687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aspartate oxidase","termid":"PBO:0044687"}


id: GO:0052092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of the release of nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of nutrient release by host","termid":"GO:0052091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nutrient release by host","synonyms":[{"name":"activation by symbiont of nutrient release from host","type":"narrow"},{"name":"positive regulation by symbiont of nutrient release from host","type":"exact"},{"name":"promotion of nutrient release from host","type":"exact"},{"name":"stimulation by symbiont of nutrient release from host","type":"narrow"},{"name":"up regulation by symbiont of nutrient release from host","type":"exact"},{"name":"up-regulation by symbiont of nutrient release from host","type":"exact"},{"name":"upregulation by symbiont of nutrient release from host","type":"exact"}],"termid":"GO:0052092"}


id: MONDO:0044210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The inheritance of only one mutated beta-globin allele (beta+ or beta0).","definition_xrefs":["SCDO:0000114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-thalassemia HBB/LCRB","termid":"MONDO:0013517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"thalassemia minor","secondary_identifiers":["ICD10CM:D56.3","SCTID:19442009","DOID:0080774","UMLS:C0869532","MedDRA:10054662","MEDGEN:450549"],"synonyms":[{"name":"beta thalassemia trait","type":"exact"}],"termid":"MONDO:0044210","xrefs":{"Monarch":{"xref_id":"0044210"}}}


id: GO:0001794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response resulting in cell death mediated by activation of the classical complement pathway or induction of effector cell phagocytosis or cytolysis mechanisms via complement or Fc receptors following the binding of antibodies to cell surface antigens on a target cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type II hypersensitivity","termid":"GO:0002445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type IIa hypersensitivity","termid":"GO:0001794"}


id: PBO:0082024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyxin pseudogene 1","termid":"PBO:0082024"}


id: MONDO:0018722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary lymphedema with associated anomalies (obsolete MONDO:0018722)","secondary_identifiers":["Orphanet:458841"],"termid":"MONDO:0018722","xrefs":{"Monarch":{"xref_id":"0018722"}}}


id: PBO:0076477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter 2, ATP binding cassette subfamily B member","termid":"PBO:0076477"}


id: MOD:01109
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9-fluorenylmethyloxycarbonyl (Fmoc)","termid":"MOD:01109"}


id: MONDO:0021108
data:
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id: GO:0098660
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id: GO:0006266
data:
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id: PBO:0078206
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id: GO:0046632
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of an alpha-beta T cell. An alpha-beta T cell is a T cell that expresses an alpha-beta T cell receptor complex.","definition_xrefs":["GOC:ai","CL:0000789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"},{"relation_name":"is_a","term_name":"alpha-beta T cell activation","termid":"GO:0046631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell differentiation","synonyms":[{"name":"alpha-beta T cell development","type":"related"},{"name":"alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"alpha-beta T-cell differentiation","type":"exact"},{"name":"alpha-beta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0046632"}


id: PBO:0031639
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id: PR:O43084
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp3103 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-independent glyoxalase hsp3103 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.09","synonyms":[{"name":"Spom972h-hsp3103","type":"exact"},{"name":"glyoxalase 3 homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"heat shock protein 31 homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43084"}


id: GO:0017058
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id: PBO:0082068
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id: FYPO:0000181
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id: PBO:0047493
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id: PBO:0064176
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id: FYPO:0001183
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id: PBO:0052632
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id: GO:0106376
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id: PBO:0034155
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id: FYPO:0006257
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id: PBO:0077248
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 1","termid":"PBO:0077248"}


id: GO:2001298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N(omega),N(omega)-dimethyl-L-arginine, a methyl-L-arginine having two methyl groups both attached to the primary amino moiety of the guanidino group.","definition_xrefs":["PMID:10510241","GOC:rs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"N(omega),N(omega)-dimethyl-L-arginine metabolic process","synonyms":[{"name":"N(omega),N(omega)-dimethyl-L-arginine metabolism","type":"exact"}],"termid":"GO:2001298"}


id: PBO:0004859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn12","termid":"PBO:0004859"}


id: PBO:0072211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 10","termid":"PBO:0072211"}


id: PBO:0042034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 88C","termid":"PBO:0042034"}


id: FYPO:0004511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are longer than normal and are curved, i.e. follow a smooth bend rather than a straight line, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long cytoplasmic microtubules","termid":"FYPO:0000233"},{"relation_name":"is_a","term_name":"curved interphase microtubules","termid":"FYPO:0003327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002399","FYPO:0000002"],"is_obsolete":false,"name":"long curved interphase microtubules","synonyms":[{"name":"elongated curved interphase microtubules","type":"exact"},{"name":"long curved cytoplasmic microtubules during interphase of mitotic cell cycle","type":"exact"},{"name":"long curved cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"long curved interphase cytoplasmic microtubules","type":"exact"},{"name":"long curved interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0004511"}


