# terms

id: FYPO:0003042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to nuclear exosome foci does not occur. Nuclear exosome foci, also called Mmi1 nuclear foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"},{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear exosome focus","termid":"FYPO:0002963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to nuclear exosome focus","synonyms":[{"name":"abolished protein localisation to nuclear exosome focus","type":"exact"},{"name":"abolished protein localization to Mmi1 focus","type":"exact"},{"name":"abolished protein localization to Mmi1 nuclear focus","type":"exact"},{"name":"abolished protein localization to nuclear exosome focus during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nuclear exosome focus during vegetative growth","type":"exact"},{"name":"protein localization to nuclear exosome focus abolished","type":"exact"}],"termid":"FYPO:0003042"}


id: MONDO:0035400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of autoimmune hepatitis characterized by the features of classic autoimmune hepatitis (i. e. clinical presentation as acute or chronic cryptogenic hepatitis, interface hepatitis on histological examination, elevated serum aspartate aminotransferase and alanine aminotransferase levels, hypergammaglobulinemia/elevated immunoglobulin G, therapeutic response to corticosteroids) in the absence of serum autoantibodies. Clinical manifestations include fatigue, malaise, arthralgia, jaundice, at later stages also signs of advanced chronic liver disease, such as spider nevi, caput medusae, splenomegaly, ascites, and palmar erythema. Presence of concurrent autoimmune diseases is frequently observed.","definition_xrefs":["Orphanet:563589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune hepatitis","termid":"MONDO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"seronegative autoimmune hepatitis","secondary_identifiers":["UMLS:C5680121","MEDGEN:1804383","GARD:22253","ICD10CM:K75.4"],"synonyms":[{"name":"Seronegative AIH","type":"exact"},{"name":"autoantibody-negative autoimmune hepatitis","type":"exact"}],"termid":"MONDO:0035400","xrefs":{"Monarch":{"xref_id":"0035400"}}}


id: MONDO:0024535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any singleton-Merten dysplasia in which the cause of the disease is a mutation in the IFIH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Singleton-Merten dysplasia","termid":"MONDO:0008429"},{"relation_name":"is_a","term_name":"IFIH1-related type 1 interferonopathy","termid":"MONDO:0700262"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Singleton-Merten syndrome 1","secondary_identifiers":["OMIM:182250","UMLS:C4225427","MEDGEN:899946"],"synonyms":[{"name":"IFIH1 singleton-Merten dysplasia","type":"exact"},{"name":"SGMRT1","type":"related"},{"name":"singleton-Merten dysplasia caused by mutation in IFIH1","type":"exact"},{"name":"singleton-Merten syndrome 1","type":"related"}],"termid":"MONDO:0024535","xrefs":{"Monarch":{"xref_id":"0024535"}}}


id: MONDO:0019328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphangioma characterized by the presence of thin-walled cavernous lymphatic spaces.","definition_xrefs":["NCIT:C53316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"macrocystic lymphatic malformation","secondary_identifiers":["icd11.foundation:1525487462","GARD:6010","NANDO:1200881","MEDGEN:104729","Orphanet:79489","UMLS:C0205828"],"synonyms":[{"name":"cavernous lymphangioma","type":"exact"},{"name":"cavernous lymphatic malformation","type":"exact"},{"name":"macrocystic lymphangioma","type":"exact"}],"termid":"MONDO:0019328","xrefs":{"Monarch":{"xref_id":"0019328"}}}


id: SO:1000171
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal deletion whereby three breaks occur in the same chromosome; one central region is lost, and the other is inverted.","definition_xrefs":["SO:ke","FB:reference_manual"],"direct_ancestors":[{"relation_name":"has_part","term_name":"deletion","termid":"SO:0000159"},{"relation_name":"has_part","term_name":"inversion","termid":"SO:1000036"},{"relation_name":"is_a","term_name":"chromosomal_deletion","termid":"SO:1000029"},{"relation_name":"is_a","term_name":"chromosomal_inversion","termid":"SO:1000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deficient_inversion","synonyms":[{"name":"(Drosophila)Df","type":"related"},{"name":"(Drosophila)DfIn","type":"related"},{"name":"deficient inversion","type":"exact"}],"termid":"SO:1000171"}


id: GO:0045329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine biosynthetic process","termid":"GO:0006578"},{"relation_name":"is_a","term_name":"carnitine metabolic process","termid":"GO:0009437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carnitine biosynthetic process","secondary_identifiers":["Reactome:R-HSA-71262"],"synonyms":[{"name":"carnitine anabolism","type":"exact"},{"name":"carnitine biosynthesis","type":"exact"},{"name":"carnitine formation","type":"exact"},{"name":"carnitine synthesis","type":"exact"},{"name":"vitamin Bt biosynthesis","type":"exact"},{"name":"vitamin Bt biosynthetic process","type":"exact"}],"termid":"GO:0045329"}


id: MONDO:0021110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm arising from the sweat glands. Representative examples include tubular apocrine adenoma, syringofibroadenoma, and hidradenoma.","definition_xrefs":["NCIT:C7560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sweat gland neoplasm","termid":"MONDO:0002381"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"epithelial skin neoplasm","termid":"MONDO:0021634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sweat gland adenoma","secondary_identifiers":["UMLS:C0019522","MEDGEN:5551","ICDO:8400/0"],"synonyms":[{"name":"adenoma of sweat gland","type":"exact"},{"name":"adenoma of the sweat gland","type":"exact"},{"name":"adenoma, sweat gland, benign","type":"exact"},{"name":"sweat gland adenoma","type":"exact"}],"termid":"MONDO:0021110","xrefs":{"Monarch":{"xref_id":"0021110"}}}


id: GO:0071880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by a ligand binding to an adrenergic receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"is_a","term_name":"adrenergic receptor signaling pathway","termid":"GO:0071875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-activating adrenergic receptor signaling pathway","synonyms":[{"name":"activation of adenylate cyclase activity by adrenergic receptor signaling pathway","type":"related"},{"name":"activation of adenylate cyclase activity by adrenergic receptor signalling pathway","type":"exact"},{"name":"adrenergic receptor, adenylate cyclase activating pathway","type":"exact"},{"name":"adrenergic receptor, adenylyl cyclase activating pathway","type":"exact"}],"termid":"GO:0071880"}


id: GO:0008087
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that forms a transmembrane channel through which calcium ions may cross a cell membrane in response to changes in membrane potential generated in response to a light stimulus.","definition_xrefs":["PMID:9223679","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel complex","termid":"GO:0005891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"light-activated voltage-gated calcium channel complex","synonyms":[{"name":"light-activated voltage gated calcium channel complex","type":"exact"},{"name":"light-activated voltage-dependent calcium channel complex","type":"exact"},{"name":"light-activated voltage-sensitive calcium channel complex","type":"exact"}],"termid":"GO:0008087"}


id: MONDO:0006717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, intermediate, or malignant mesenchymal neoplasm composed of fibrohistiocytic cells, spindle fibroblastic cells, and histiocytes, in a storiform pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis tumor","termid":"MONDO:0002300"},{"relation_name":"is_a","term_name":"benign fibrous histiocytoma","termid":"MONDO:0002989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous fibrous histiocytoma","secondary_identifiers":["DOID:4418","EFO:1000885","NCIT:C6801","MEDGEN:1930","ONCOTREE:DF","SCTID:448015002","UMLS:C0002991","ICDO:8832/0"],"synonyms":[{"name":"DF","type":"related"},{"name":"benign cutaneous fibrous histiocytoma","type":"exact"},{"name":"benign fibrous cutaneous histiocytoma","type":"exact"},{"name":"benign fibrous histiocytoma of skin","type":"exact"},{"name":"benign fibrous histiocytoma of the skin","type":"exact"},{"name":"benign skin fibrous histiocytoma","type":"exact"},{"name":"cutaneous fibrous histiocytoma","type":"exact"},{"name":"dermatofibroma","type":"exact"},{"name":"dermatofibroma, no ICD-O subtype","type":"exact"},{"name":"dermatofibroma, no ICD-O subtype (morphologic abnormality)","type":"exact"},{"name":"fibrohistiocytic neoplasm","type":"exact"},{"name":"fibrohistiocytic tumor","type":"related"},{"name":"fibrohistiocytic tumour","type":"related"},{"name":"fibrous histiocytoma of skin","type":"exact"},{"name":"fibrous histiocytoma of the skin","type":"exact"},{"name":"fibrous xanthoma of skin","type":"exact"},{"name":"pleomorphic fibroma","type":"related"},{"name":"sclerosing angioma","type":"exact"},{"name":"sclerosing angioma (morphologic abnormality)","type":"exact"},{"name":"sclerosing angioma of skin","type":"exact"}],"termid":"MONDO:0006717","xrefs":{"Monarch":{"xref_id":"0006717"}}}


id: PBO:0088941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thiosulfate sulfurtransferase/rhodanese-like domain Rdl2","termid":"PBO:0088941"}


id: GO:1903412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bile acid stimulus.","definition_xrefs":["PMID:21757002","GOC:BHF","GOC:rl","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bile acid","termid":"GO:1903412"}


id: PBO:0074517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A9","termid":"PBO:0074517"}


id: PBO:0041883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated 2","termid":"PBO:0041883"}


id: PBO:0057781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2861","termid":"PBO:0057781"}


id: MONDO:1010951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial adenomatous polyposis that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial adenomatous polyposis, non-human animal","termid":"MONDO:1010215"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial adenomatous polyposis, pig","secondary_identifiers":["OMIA:001916-9823"],"termid":"MONDO:1010951","xrefs":{"Monarch":{"xref_id":"1010951"}}}


id: FYPO:0000938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cortical microtubule cytoskeleton during interphase of the mitotic cell cycle does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000934"},{"relation_name":"is_a","term_name":"abnormal protein localization to cortical microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000935"},{"relation_name":"is_a","term_name":"abolished protein localization to cortical microtubule cytoskeleton","termid":"FYPO:0004266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to cortical microtubule cytoskeleton during mitotic interphase","synonyms":[{"name":"abolished protein localisation to cortical microtubule cytoskeleton mitotic interphase during vegetative growth","type":"exact"},{"name":"abolished protein localization to cortical microtubule cytoskeleton during interphase of mitotic cell cycle","type":"exact"},{"name":"protein absent from cortical microtubule cytoskeleton during mitotic interphase","type":"related"},{"name":"protein localization to cortical microtubule cytoskeleton abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0000938"}


id: PR:O94587
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial inner membrane protein COX18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12428:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein cox18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.15c","secondary_identifiers":["UniProtKB:O94587"],"synonyms":[{"name":"SPCC1442.15c","type":"related"},{"name":"Sp3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COX18","type":"exact"},{"name":"cox18sp+ (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"oxa1-3","type":"related"},{"name":"oxa103","type":"related"}],"termid":"PR:O94587"}


id: GO:0002315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a B cell in the spleen acquires the specialized features of a marginal zone B cell. Marginal zone B cells are localized in a distinct anatomical region of the spleen that represents the major antigen-filtering and scavenging area (by specialized macrophages resident there). It appears that they are preselected to express a BCR repertoire similar to B-1 B cells, biased toward bacterial cell wall constituents and senescent self-components (such as oxidized LDL).","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature B cell differentiation involved in immune response","termid":"GO:0002313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"marginal zone B cell differentiation","synonyms":[{"name":"marginal zone B cell development","type":"related"},{"name":"marginal zone B lymphocyte differentiation","type":"exact"},{"name":"marginal zone B-cell differentiation","type":"exact"},{"name":"marginal zone B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002315"}


id: PBO:0052232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 9","termid":"PBO:0052232"}


id: MONDO:0013672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 15","termid":"MONDO:0016913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15q25 deletion syndrome","secondary_identifiers":["DOID:0060396","UMLS:C3280355","MEDGEN:481985","OMIM:614294"],"synonyms":[{"name":"chromosome 15q25 deletion syndrome","type":"exact"}],"termid":"MONDO:0013672","xrefs":{"Monarch":{"xref_id":"0013672"}}}


id: SO:0000158
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cloning vector that utilizes the E. coli F factor.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fosmid","secondary_identifiers":["http://en.wikipedia.org/wiki/Fosmid"],"synonyms":[{"name":"fosmid vector","type":"related"}],"termid":"SO:0000158"}


id: SO:0002091
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A UTR variant of intronic sequence of the 5' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_variant","termid":"SO:0001623"},{"relation_name":"is_a","term_name":"coding_transcript_intron_variant","termid":"SO:0001969"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_intron_variant","synonyms":[{"name":"5 prime UTR intron variant","type":"exact"}],"termid":"SO:0002091"}


id: MONDO:1011793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive myopathy, non-human animal","secondary_identifiers":["OMIA:000829"],"termid":"MONDO:1011793","xrefs":{"Monarch":{"xref_id":"1011793"}}}


id: PBO:0042373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200 receptor 1","termid":"PBO:0042373"}


id: GO:0042813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a Wnt protein and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"Wnt receptor activity","synonyms":[{"name":"Wnt-activated receptor activity","type":"exact"},{"name":"frizzled receptor activity","type":"related"},{"name":"frizzled-2 receptor activity","type":"related"}],"termid":"GO:0042813"}


id: GO:0031076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process occurring during the embryonic phase whose specific outcome is the progression of the eye over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camera-type eye development","termid":"GO:0043010"},{"relation_name":"is_a","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic camera-type eye development","synonyms":[{"name":"embryonic eye development","type":"exact"}],"termid":"GO:0031076"}


id: GO:0101025
data:
  {"annotated_genes":["SJAG_04883","SJAG_04972","SJAG_04509","SJAG_03219","SJAG_03313","SJAG_04319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110694,93386,98017,110282,98684,88212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0101026"}]},"cv_name":"biological_process","definition":"The process in which a nuclear membrane is synthesized, aggregates, and bonds together.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane biogenesis","termid":"GO:0044091"},{"relation_name":"part_of","term_name":"nuclear membrane organization","termid":"GO:0071763"}],"gene_count":6,"genes_by_uniquename":{"SJAG_03219":null,"SJAG_03313":null,"SJAG_04319":null,"SJAG_04509":null,"SJAG_04883":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"nuclear membrane biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0101025","terms_by_termid":{"GO:0101026":null}}


id: GO:0071351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-18 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-18","termid":"GO:0070673"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-18","synonyms":[{"name":"cellular response to IL-18","type":"exact"}],"termid":"GO:0071351"}


id: GO:0002921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a humoral immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of humoral immune response","termid":"GO:0002920"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"humoral immune response","termid":"GO:0006959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of humoral immune response","synonyms":[{"name":"down regulation of humoral immune response","type":"exact"},{"name":"down-regulation of humoral immune response","type":"exact"},{"name":"downregulation of humoral immune response","type":"exact"},{"name":"inhibition of humoral immune response","type":"narrow"}],"termid":"GO:0002921"}


id: SO:0001968
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant of a protein coding gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_transcript_variant","synonyms":[{"name":"Jannovar:coding_transcript_variant","type":"exact"},{"name":"coding transcript variant","type":"exact"}],"termid":"SO:0001968"}


id: GO:0019958
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C-X-C chemokine; C-X-C chemokines have a single amino acid between the first two cysteines of the characteristic four cysteine motif.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine binding","termid":"GO:0019956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"C-X-C chemokine binding","termid":"GO:0019958"}


id: MONDO:0008124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"omphalocele","termid":"MONDO:0019015"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omphalocele, autosomal","secondary_identifiers":["UMLS:C3277235","OMIM:164750","GARD:18586","MEDGEN:478865"],"synonyms":[{"name":"chromosome 1P31 Duplication syndrome","type":"related"},{"name":"omphalocele due to duplication of 1p31.3, isolated cases","type":"exact"},{"name":"omphalocele, autosomal","type":"exact"},{"name":"paraomphalocele","type":"related"},{"name":"type - epigastric - defect in the cephalic fold","type":"related"},{"name":"type - hypogastric - defect in the caudal fold","type":"related"}],"termid":"MONDO:0008124","xrefs":{"Monarch":{"xref_id":"0008124"}}}


id: GO:1990211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the jasmonic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:16553894","GOC:ml","PMID:14617079"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of jasmonic acid levels in host (obsolete GO:1990211)","termid":"GO:1990211"}


id: GO:0014011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of Schwann cells by cell division, resulting in the expansion of their population in response to an axonal lesion. The newly generated Schwann cells support subsequent axon regeneration in the peripheral nervous system.","definition_xrefs":["ISBN:0878932585","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schwann cell proliferation","termid":"GO:0014010"},{"relation_name":"part_of","term_name":"peripheral nervous system axon regeneration","termid":"GO:0014012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}


id: GO:0160254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tRNA queuosine(34) by salvaging available queuosine or precursors of queuosine (preQ0 or preQ1).","definition_xrefs":["MetaCyc:PWY-8106","PMID:28208705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA queuosine(34) biosynthetic process","termid":"GO:0008616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors","termid":"GO:0160254"}


id: GO:0043309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of eosinophil degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"eosinophil degranulation","termid":"GO:0043308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of eosinophil degranulation","synonyms":[{"name":"regulation of eosinophil granule exocytosis","type":"exact"}],"termid":"GO:0043309"}


id: PBO:0042626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 2A","termid":"PBO:0042626"}


id: GO:2000703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation.","definition_xrefs":["GOC:yaf","GOC:obol","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040037"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000702"},{"relation_name":"negatively_regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation","synonyms":[{"name":"negative regulation of FGF receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of FGF receptor signalling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of FGFR signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of fibroblast growth factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"negative regulation of fibroblast growth factor receptor signalling pathway of ureteric bud formation","type":"exact"}],"termid":"GO:2000703"}


id: PBO:0002999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formamidase-like protein (predicted)","termid":"PBO:0002999"}


id: PBO:0050198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 15","termid":"PBO:0050198"}


id: GO:0120305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the deposition or modulates the distribution of coloring matter in an organism.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pigmentation","termid":"GO:0120305"}


id: GO:0044326
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of the dendritic spine that connects the dendritic shaft to the head of the dendritic spine.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic spine neck","secondary_identifiers":["NIF_Subcellular:sao1642908940"],"synonyms":[{"name":"neck","type":"broad"},{"name":"pedicle","type":"related"},{"name":"spine neck","type":"broad"}],"termid":"GO:0044326"}


id: FYPO:0002910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to transcribed regions of chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during vegetative growth","termid":"FYPO:0002909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at transcribed regions during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at transcribed regions during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at transcribed regions during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to transcribed chromatin regions during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at transcribed regions during vegetative growth","type":"exact"}],"termid":"FYPO:0002910"}


id: PBO:0081104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger E-box binding homeobox 2 pseudogene 1","termid":"PBO:0081104"}


id: GO:0022873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + maltose(out) = protein histidine + maltose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-maltose phosphotransferase system transporter activity","synonyms":[{"name":"maltose PTS transporter activity","type":"exact"}],"termid":"GO:0022873"}


id: GO:0003274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell-cell adhesion process of mesenchymal cardiac cushion cells that contributes to the process of cushion shaping.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in heart morphogenesis","termid":"GO:0061343"},{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"endocardial cushion morphogenesis","termid":"GO:0003203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"endocardial cushion fusion","termid":"GO:0003274"}


id: GO:0009460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome containing noncovalently bound protoheme (iron protoporphyrin IX; heme b).","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome b (obsolete GO:0009460)","synonyms":[{"name":"cytochrome b","type":"exact"}],"termid":"GO:0009460"}


id: GO:0032811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of epinephrine.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epinephrine secretion","termid":"GO:0014060"},{"relation_name":"is_a","term_name":"negative regulation of catecholamine secretion","termid":"GO:0033604"},{"relation_name":"negatively_regulates","term_name":"epinephrine secretion","termid":"GO:0048242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of epinephrine secretion","synonyms":[{"name":"down regulation of epinephrine secretion","type":"exact"},{"name":"down-regulation of epinephrine secretion","type":"exact"},{"name":"downregulation of epinephrine secretion","type":"exact"},{"name":"inhibition of epinephrine secretion","type":"narrow"},{"name":"negative regulation of adrenaline secretion","type":"exact"}],"termid":"GO:0032811"}


id: MONDO:1012773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cystinuria that occurs in cats due to a mutation in the SLC7A9 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystinuria, non-human animal","termid":"MONDO:1012968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystinuria, SLC7A9-related, domestic cat","secondary_identifiers":["OMIA:002023-9685"],"synonyms":[{"name":"cystinuria, type B, domestic cat","type":"related"}],"termid":"MONDO:1012773","xrefs":{"Monarch":{"xref_id":"1012773"}}}


id: MONDO:0015715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe hemophilia B is a form of hemophilia B characterized by a large deficiency of factor IX leading to frequent spontaneous hemorrhage and abnormal bleeding as a result of minor injuries, or following surgery or tooth extraction.","definition_xrefs":["Orphanet:169793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia B","termid":"MONDO:0010604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"severe hemophilia B","secondary_identifiers":["GARD:17056","MEDGEN:1826004","UMLS:C5679576"],"synonyms":[{"name":"severe factor IX deficiency","type":"exact"},{"name":"severe haemophilia type B","type":"exact"},{"name":"severe hemophilia type B","type":"exact"}],"termid":"MONDO:0015715","xrefs":{"Monarch":{"xref_id":"0015715"}}}


id: FYPO:0000504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of necrotic cell death is decreased. Necrotic cell death is morphologically characterized by a gain in cell volume (oncosis), swelling of organelles, plasma membrane rupture and subsequent loss of intracellular contents.","definition_xrefs":["PomBase:mah","GO:0070265"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased necrotic cell death (obsolete FYPO:0000504)","synonyms":[{"name":"necrotic cell death: decreased","type":"related"},{"name":"reduced necrotic cell death","type":"exact"}],"termid":"FYPO:0000504"}


id: PBO:0001283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ranBP","termid":"PBO:0001283"}


id: PBO:0088040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme; most similar in sequence to Xenopus ubiquitin-conjugating enzyme E2-C, but not a true functional homolog of this E2; unlike E2-C, not required for the degradation of mitotic cyclin Clb2","termid":"PBO:0088040"}


id: MONDO:0003372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the vulva. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C40318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"},{"relation_name":"is_a","term_name":"vulva sarcoma","termid":"MONDO:0005214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar leiomyosarcoma","secondary_identifiers":["DOID:5286","MEDGEN:378348","EFO:1001975","UMLS:C2168304"],"synonyms":[{"name":"leiomyosarcoma of mammalian vulva","type":"exact"},{"name":"mammalian vulva leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003372","xrefs":{"Monarch":{"xref_id":"0003372"}}}


id: PBO:0040795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biglycan","termid":"PBO:0040795"}


id: GO:0141197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate + 2 H+ + H2O + oxidized [flavodoxin] = 2-C-methyl-D-erythritol 2,4-cyclic diphosphate + reduced [flavodoxin].","definition_xrefs":["RHEA:43604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","termid":"GO:0052592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-hydroxy-3-methylbut-2-enyl-diphosphate synthase activity (flavodoxin)","secondary_identifiers":["KEGG_REACTION:R10859","MetaCyc:RXN-15878","EC:1.17.7.3"],"synonyms":[{"name":"(E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase activity","type":"broad"},{"name":"4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity","type":"broad"}],"termid":"GO:0141197"}


id: GO:0070014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses oligo-1,6-glucosidase activity; the complex is a heterodimer located in the cell membrane, and is formed by proteolytic cleavage of a single precursor polypeptide. The two subunits have different substrate specificities.","definition_xrefs":["PMID:3366777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"glucosidase complex","termid":"GO:1902687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"sucrase-isomaltase complex","secondary_identifiers":["Wikipedia:Sucrase-isomaltase"],"synonyms":[{"name":"oligo-1,6-glucosidase complex","type":"related"}],"termid":"GO:0070014"}


id: PBO:0017673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein New2","termid":"PBO:0017673"}


id: PBO:0078701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAA) 3-1","termid":"PBO:0078701"}


id: PBO:0091478
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 Homology Domain","termid":"PBO:0091478"}


id: MONDO:0012677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial atrial fibrillation in which the cause of the disease is a mutation in the KCNE2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 4","secondary_identifiers":["MESH:C566244","OMIM:611493","GARD:15516","MEDGEN:400041","UMLS:C1862394"],"synonyms":[{"name":"ATFB4","type":"related"},{"name":"KCNE2 familial atrial fibrillation","type":"exact"},{"name":"atrial fibrillation, familial, 4","type":"exact"},{"name":"atrial fibrillation, familial, type 4","type":"exact"},{"name":"familial atrial fibrillation caused by mutation in KCNE2","type":"exact"}],"termid":"MONDO:0012677","xrefs":{"Monarch":{"xref_id":"0012677"}}}


id: GO:0019114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: catechol + O2 = a muconate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete catechol dioxygenase activity (obsolete GO:0019114)","termid":"GO:0019114"}


id: PBO:0061200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOC2 like nucleolar associated transcriptional repressor","termid":"PBO:0061200"}


id: GO:0038117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C-C motif chemokine 19 (CCL19) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:15059845","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine receptor activity","termid":"GO:0016493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"C-C motif chemokine 19 receptor activity","synonyms":[{"name":"CCL19 receptor activity","type":"related"}],"termid":"GO:0038117"}


id: PBO:0111781
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat protein","termid":"PBO:0111781"}


id: PBO:0072782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAE1 pseudogene 1","termid":"PBO:0072782"}


id: FYPO:0007647
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, contains one nucleus in the normal location, has no septum, and progression through the mitotic cell cycle is arrested in M phase.","definition_xrefs":["PMID:33506191","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"},{"relation_name":"is_a","term_name":"normal nucleus location","termid":"FYPO:0002070"},{"relation_name":"is_a","term_name":"inviable aseptate mononucleate vegetative cell","termid":"FYPO:0003763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0005447","FYPO:0000257","FYPO:0000032","FYPO:0000138","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"inviable elongated mononucleate aseptate cell with cell cycle arrest in mitotic M phase and normal nucleus localization","synonyms":[{"name":"elongated inviable mononucleate aseptate cell with mitotic cell cycle arrest in M phase and normal nucleus localization during vegetative growth","type":"exact"},{"name":"elongated inviable mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nucleus localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell arrested in M with normal nucleus localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in M phase and normal nucleus localization during mitotic cell cycle","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitosis and normal nucleus localization","type":"related"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nuclear localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nuclear position","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nucleus localisation","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nucleus localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic M phase arrest and normal nucleus localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic cell cycle arrest in M phase and normal nucleus localization","type":"exact"},{"name":"inviable elongated mononucleate aseptate vegetative cell with mitotic nuclear division arrest and normal nucleus localization","type":"exact"},{"name":"inviable mononucleate aseptate cell arrested in mitotic M phase without nuclear displacement","type":"exact"},{"name":"lethal; elongated mononucleate aseptate vegetative cell with cell cycle arrest in mitotic M phase and normal nucleus localization","type":"exact"},{"name":"mitotic M-phase arrested elongated inviable mononucleate aseptate vegetative cell with normal nucleus localization","type":"exact"},{"name":"mitotic cell cycle arrest in M-phase with elongated inviable mononucleate aseptate cell and normal nucleus localization","type":"exact"},{"name":"nuclear division arrest without septation (elongated cell) with normal nucleus localization","type":"exact"}],"termid":"FYPO:0007647"}


id: PBO:0088881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MatE family transmembrane transporter","termid":"PBO:0088881"}


id: GO:0098586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to virus","termid":"GO:0009615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to virus","termid":"GO:0098586"}


id: PBO:0082218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 7 subunit of the 20S proteasome; protein abundance increases in response to DNA replication stress","termid":"PBO:0082218"}


id: PATO:0002132
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour by virtue of the bearer's disposition not to invade surrounding tissues.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic","termid":"PATO:0002011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic, non-invasive","termid":"PATO:0002132"}


id: PBO:0001735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase Pub2","termid":"PBO:0001735"}


id: MONDO:0011329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral palsy, spastic quadriplegic, 1 (obsolete MONDO:0011329)","termid":"MONDO:0011329","xrefs":{"Monarch":{"xref_id":"0011329"}}}


id: PR:Q9UUG2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC926.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUG2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized leucine-rich repeat-containing protein C926.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.06c","synonyms":[{"name":"Spom972h-SPAC926.06c","type":"exact"}],"termid":"PR:Q9UUG2"}


id: PBO:0090781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor zf-C2H2 type","termid":"PBO:0090781"}


id: FYPO:0005828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein transport along microtubules to the cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"},{"relation_name":"is_a","term_name":"normal protein transport along microtubule during vegetative growth","termid":"FYPO:0005827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein transport along microtubule to cell tip during vegetative growth","synonyms":[{"name":"normal protein movement along microtubule to cell tip during vegetative growth","type":"exact"},{"name":"normal protein transport along microtubule to cell tip during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005828"}


id: PBO:0011992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp14 (predicted)","termid":"PBO:0011992"}


id: PBO:0085953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant is viable and displays elevated frequency of mitochondrial genome loss; null mutation confers sensitivity to tunicamycin and DTT","termid":"PBO:0085953"}


id: PR:Q9Y7Y4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protoheme IX farnesyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03301","PANTHER:PTHR11048:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoheme IX farnesyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.02c","secondary_identifiers":["UniProtKB:Q9Y7Y4"],"synonyms":[{"name":"Spom972h-COX10","type":"exact"},{"name":"heme O synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7Y4"}


id: PBO:0039918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF17 antisense RNA 1","termid":"PBO:0039918"}


id: MONDO:0015314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary laryngeal lymphangioma is a rare, benign, congenital malformation of the lymphatic system characterized by a polypoidal, variable-sized, soft tissue mass located in the larynx. Most lesions manifest by the 2nd year of life and, depending on the size, patients may present with changes in voice, dysphagia, stridor, airway obstruction and/or respiratory distress. Cystic hygroma of the neck is frequently associated.","definition_xrefs":["Orphanet:137926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary laryngeal lymphangioma","secondary_identifiers":["MEDGEN:1634144","GARD:19891","SCTID:763617006","UMLS:C4706521"],"termid":"MONDO:0015314","xrefs":{"Monarch":{"xref_id":"0015314"}}}


id: MONDO:0007730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histiocytic dermatoarthritis","secondary_identifiers":["MESH:C564183","OMIM:142730","MEDGEN:327131","UMLS:C1840551"],"synonyms":[{"name":"histiocytic dermatoarthritis","type":"exact"}],"termid":"MONDO:0007730","xrefs":{"Monarch":{"xref_id":"0007730"}}}


id: PBO:0004636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog/2-OG-Fe(II) oxygenase family (predicted)","termid":"PBO:0004636"}


id: MONDO:0017944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Invasive non-typhoidal salmonellosis (iNTS) is a rare bacterial infectious disease caused by extraintestinal infection of non-typhoidal serotypes of Salmonella enterica in patients with underlying HIV infection, malaria or malignancy. It has a high mortality rate and patients typically present with fever, pallor and respiratory signs (cough, tachnypnea, pneumonia). Gastrointestinal manifestations (diarrhea, vomit, abdominal pain) are not common. Occasionally, organ absseses, septic shock and meningitis may be observed.","definition_xrefs":["Orphanet:324648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salmonellosis","termid":"MONDO:0000827"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invasive non-typhoidal salmonellosis","secondary_identifiers":["GARD:21449","UMLS:C4706572","MEDGEN:1638286","SCTID:763772002"],"synonyms":[{"name":"iNTS disease","type":"exact"},{"name":"invasive non-typhoidal salmonella disease","type":"exact"}],"termid":"MONDO:0017944","xrefs":{"Monarch":{"xref_id":"0017944"}}}


id: PBO:0084026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMP synthase; highly conserved enzyme that catalyzes the second step in the biosynthesis of GMP from inosine 5'-phosphate (IMP); transcription is not subject to regulation by guanine but is negatively regulated by nutrient starvation; reduction-of-function mutation gua1-G388D causes changes in cellular guanine nucleotide pools, defects in general protein synthesis, and impaired translation of GCN4 mRNA","termid":"PBO:0084026"}


id: GO:0033709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinitol + NADP+ = D-ribulose + NADPH + H+. Can also produce D-ribulose.","definition_xrefs":["EC:1.1.1.287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-arabinitol dehydrogenase (NADP+) activity","synonyms":[{"name":"ARD1p","type":"related"},{"name":"D-arabinitol dehydrogenase 1 activity","type":"broad"},{"name":"D-arabinitol dehydrogenase, D-ribulose forming (NADP+) activity","type":"related"},{"name":"D-arabinitol dehydrogenase, D-xylulose forming (NADP+) activity","type":"related"},{"name":"D-arabinitol:NADP+ dehydrogenase activity","type":"broad"},{"name":"NADP+-dependent D-arabinitol dehydrogenase activity","type":"broad"}],"termid":"GO:0033709"}


id: PBO:0003380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage response protein (predicted)","termid":"PBO:0003380"}


id: PBO:0017436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_developmental_progression_of","termid":"PBO:0017436"}


id: PATO:0000638
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's consisting of blebbing of the nucleus and DNA fragmentation due to the cell undergoing a specific form of programmed cell death termed apoptosis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptotic","secondary_identifiers":["GO:0006915"],"termid":"PATO:0000638"}


id: PBO:0089633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase inhibitor and disassembly protein in response to oxidative stress Oxr1","termid":"PBO:0089633"}


id: GO:0036244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a neutral pH (pH close to 7) stimulus. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["Wikipedia:PH","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to neutral pH","termid":"GO:0036176"},{"relation_name":"is_a","term_name":"cellular response to pH","termid":"GO:0071467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to neutral pH","termid":"GO:0036244"}


id: FYPO:0000199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of long tract gene conversion is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased gene conversion during vegetative growth","termid":"FYPO:0005788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"increased long tract gene conversion","synonyms":[{"name":"DNA recombination defects, long tract gene conversion, increased","type":"exact"},{"name":"increased long tract gene conversion during mitotic cell cycle","type":"related"},{"name":"increased long tract gene conversion during vegetative growth","type":"exact"}],"termid":"FYPO:0000199"}


id: GO:0052913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanosine(966) in 16S rRNA = N(2)-methylguanosine(966) in 16S rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (guanine-N2-)-methyltransferase activity","termid":"GO:0008990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"16S rRNA (guanine(966)-N(2))-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN0-6515","RHEA:23548"],"termid":"GO:0052913"}


id: GO:0010753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of cGMP-mediated signaling.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cGMP-mediated signaling","termid":"GO:0010752"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"cGMP-mediated signaling","termid":"GO:0019934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of cGMP-mediated signaling","synonyms":[{"name":"positive regulation of cGMP-mediated signalling","type":"exact"}],"termid":"GO:0010753"}


id: GO:1902275
data:
  {"annotated_genes":["SJAG_02342","SJAG_01599","SJAG_03624","SJAG_03255","SJAG_02381","SJAG_01867","SJAG_02592","SJAG_02723","SJAG_02622","SJAG_04369","SJAG_02990","SJAG_01511","SJAG_00142","SJAG_03664"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107017,77621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[108857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[99296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[91511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"},{"annotations":[91512,110716,94705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"},{"annotations":[98897,91139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031445"},{"annotations":[97516,100640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090052"},{"annotations":[118147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010964"},{"annotations":[92194,118520,118148,97517,100641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chromatin organization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bf","GOC:vw","PMID:18314879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_01511":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02342":null,"SJAG_02381":null,"SJAG_02592":null,"SJAG_02622":null,"SJAG_02723":null,"SJAG_02990":null,"SJAG_03255":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"regulation of chromatin organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001672","GO:1903308"],"synonyms":[{"name":"regulation of chromatin assembly or disassembly","type":"related"},{"name":"regulation of chromatin assembly/disassembly","type":"related"},{"name":"regulation of chromatin modification","type":"related"},{"name":"regulation of chromatin organisation","type":"exact"},{"name":"regulation of establishment or maintenance of chromatin architecture","type":"exact"}],"termid":"GO:1902275","terms_by_termid":{"GO:0010964":null,"GO:0031445":null,"GO:0031453":null,"GO:0060906":null,"GO:0061188":null,"GO:0090052":null,"GO:0090053":null,"GO:0090055":null,"GO:1902801":null}}


id: FYPO:0001749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tacrolimus when the cell is subject to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to tacrolimus","termid":"FYPO:0000086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to tacrolimus during salt stress","synonyms":[{"name":"hypersensitive to tacrolimus during salt stress","type":"exact"},{"name":"sensitive to FK506 during salt stress","type":"exact"},{"name":"sensitive to tacrolimus during salt stress during mitotic cell cycle","type":"related"},{"name":"sensitive to tacrolimus during salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001749"}


id: PBO:0025474
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transport disorders","termid":"PBO:0025474"}


id: PR:Q9USH0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP31B10.04 gene.","definition_xrefs":["UniProtKB:Q9USH0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein P31B10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.04","synonyms":[{"name":"Spom972h-SPCP31B10.04","type":"exact"}],"termid":"PR:Q9USH0"}


id: GO:0009740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of gibberellic acid.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellin mediated signaling pathway","termid":"GO:0010476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"gibberellic acid mediated signaling pathway","synonyms":[{"name":"GA-signaling","type":"exact"},{"name":"gibberellic acid mediated signalling","type":"exact"},{"name":"gibberellic acid signaling","type":"exact"}],"termid":"GO:0009740"}


id: PBO:0068238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S pre-ribosomal N4","termid":"PBO:0068238"}


id: GO:1901165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of trophoblast cell migration.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of trophoblast cell migration","termid":"GO:1901163"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"trophoblast cell migration","termid":"GO:0061450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of trophoblast cell migration","synonyms":[{"name":"activation of trophoblast cell migration","type":"narrow"},{"name":"up regulation of trophoblast cell migration","type":"exact"},{"name":"up-regulation of trophoblast cell migration","type":"exact"},{"name":"upregulation of trophoblast cell migration","type":"exact"}],"termid":"GO:1901165"}


id: GO:0071662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of granzyme B.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of production of molecular mediator of immune response","termid":"GO:0002701"},{"relation_name":"is_a","term_name":"regulation of granzyme B production","termid":"GO:0071661"},{"relation_name":"negatively_regulates","term_name":"granzyme B production","termid":"GO:0071613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of granzyme B production","termid":"GO:0071662"}


id: PBO:0027301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_increase_in_RNA_level_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027301"}


id: PBO:0002126
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in the current viewer tco1 gene is hidden behind SPNCRNA.600","termid":"PBO:0002126"}


id: PBO:0031374
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondria_fused","termid":"PBO:0031374"}


id: PBO:0113230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent short-chain aldehyde reductase; involved in detoxification of furfural; expression is upregulated in cells treated with the aldehydes furfural and glycolaldehyde, the mycotoxin patulin, and also the quinone methide triterpene celastrol; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0113230"}


id: PBO:0038426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A2ML1 antisense RNA 2","termid":"PBO:0038426"}


id: PBO:0051628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ilvB acetolactate synthase like","termid":"PBO:0051628"}


id: MONDO:0020686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute inflammation of the tonsils caused by viruses or bacteria. Signs and symptoms include fever, enlargement of the tonsils, difficulty swallowing, and enlargement of the regional lymph nodes.","definition_xrefs":["NCIT:C97142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonsillitis","termid":"MONDO:0001039"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acute tonsillitis","secondary_identifiers":["ICD9:463","UMLS:C0001361","icd11.foundation:260431605","SCTID:17741008","MEDGEN:472878"],"synonyms":[{"name":"acute adenoiditis","type":"narrow"},{"name":"acute tonsillitis","type":"exact"},{"name":"infective tonsillitis","type":"related"}],"termid":"MONDO:0020686","xrefs":{"Monarch":{"xref_id":"0020686"}}}


id: PR:O94408
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13829:SF2","OMA:SCHPO04961","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.01c","secondary_identifiers":["UniProtKB:O94408"],"synonyms":[{"name":"Spom972h-LSM2","type":"exact"}],"termid":"PR:O94408"}


id: FYPO:0002412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable, elongated, and curved along the long axis in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable curved elongated vegetative cell population (obsolete FYPO:0002412)","synonyms":[{"name":"inviable curved long vegetative cell population","type":"exact"},{"name":"population of curved inviable long cells","type":"exact"}],"termid":"FYPO:0002412"}


id: GO:0010086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the embryonic root are generated and organized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root morphogenesis","termid":"GO:0010015"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic root morphogenesis","termid":"GO:0010086"}


id: GO:2000454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD8-positive, alpha-beta cytotoxic T cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000451"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:2000452"},{"relation_name":"positively_regulates","term_name":"CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:0035698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:2000454"}


id: GO:0006926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any apoptotic process in a cell infected with a virus.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete virus-infected cell apoptotic process (obsolete GO:0006926)","synonyms":[{"name":"apoptosis of virus-infected cells","type":"exact"},{"name":"killing virus-infected cells","type":"exact"},{"name":"programmed cell death of virus-infected cells by apoptosis","type":"exact"},{"name":"programmed cell death, virus-infected cells","type":"exact"},{"name":"virus-infected cell apoptosis","type":"narrow"},{"name":"virus-infected cell apoptotic process","type":"exact"},{"name":"virus-infected cell programmed cell death by apoptosis","type":"exact"}],"termid":"GO:0006926"}


id: PBO:0089987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 1 Pre3","termid":"PBO:0089987"}


id: GO:1902657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a prospore membrane.","definition_xrefs":["PMID:24036347","GOC:dph","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to prospore membrane","secondary_identifiers":["GO:0072693","GO:1902658"],"synonyms":[{"name":"establishment of protein localisation in prospore membrane","type":"related"},{"name":"establishment of protein localisation to prospore membrane","type":"related"},{"name":"establishment of protein localization in prospore membrane","type":"related"},{"name":"establishment of protein localization to prospore membrane","type":"related"},{"name":"protein localisation in prospore membrane","type":"exact"},{"name":"protein localisation to prospore membrane","type":"exact"},{"name":"protein localization in prospore membrane","type":"exact"},{"name":"protein targeting to FSM","type":"related"},{"name":"protein targeting to ascospore-type prospore membrane","type":"related"},{"name":"protein targeting to forespore membrane","type":"related"},{"name":"protein targeting to prospore membrane","type":"related"},{"name":"protein-prospore membrane targeting","type":"related"}],"termid":"GO:1902657"}


id: GO:1904506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomere maintenance in response to DNA damage.","definition_xrefs":["GOC:TermGenie","PMID:22579284","GO_REF:0000058","GOC:BHF_telomere","GOC:nc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance","termid":"GO:0032205"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance in response to DNA damage","termid":"GO:1904505"},{"relation_name":"negatively_regulates","term_name":"telomere maintenance in response to DNA damage","termid":"GO:0043247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of telomere maintenance in response to DNA damage","synonyms":[{"name":"down regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"down regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"down-regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"down-regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"downregulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"downregulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"inhibition of DNA damage response, telomere maintenance","type":"narrow"},{"name":"inhibition of telomere maintenance in response to DNA damage","type":"narrow"},{"name":"negative regulation of DNA damage response, telomere maintenance","type":"exact"}],"termid":"GO:1904506"}


id: PR:O60136
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18H10.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C18H10.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.05","synonyms":[{"name":"Spom972h-SPBC18H10.05","type":"exact"}],"termid":"PR:O60136"}


id: PATO:0001596
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A depth quality which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"},{"relation_name":"is_a","term_name":"depth","termid":"PATO:0001595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased depth","secondary_identifiers":["PATO:0001666"],"synonyms":[{"name":"deep","type":"exact"}],"termid":"PATO:0001596"}


id: GO:0102055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3'-phosphonato-5'-adenylyl sulfate + a 12-hydroxyjasmonate = adenosine 3',5'-bismonophosphate + a 12-hydroxyjasmonate sulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 12-hydroxyjasmonate sulfotransferase activity (obsolete GO:0102055)","termid":"GO:0102055"}


id: PBO:0061213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOL4L divergent transcript","termid":"PBO:0061213"}


id: PBO:0059870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 8","termid":"PBO:0059870"}


id: PBO:0047370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 2","termid":"PBO:0047370"}


id: PBO:0084216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homo-isocitrate dehydrogenase; an NAD-linked mitochondrial enzyme required for the fourth step in the biosynthesis of lysine, in which homo-isocitrate is oxidatively decarboxylated to alpha-ketoadipate","termid":"PBO:0084216"}


id: GO:0021803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of a long process to the pial surface as a cell leaves the ventricular zone.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","PMID:12626695","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"},{"relation_name":"part_of","term_name":"somal translocation","termid":"GO:0021802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"extension of leading cell process to pial surface","termid":"GO:0021803"}


id: MONDO:0004977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature T-cell non-Hodgkin lymphoma, characterized by systemic disease and a polymorphous infiltrate involving lymph nodes and extranodal sites. The clinical course is typically aggressive.","definition_xrefs":["PMID:22700722","NCIT:C7528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature T-cell and NK-cell non-Hodgkin lymphoma","termid":"MONDO:0000430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"angioimmunoblastic T-cell lymphoma","secondary_identifiers":["SCTID:413537009","DOID:0111147","GARD:11973","icd11.foundation:1254954229","MedDRA:10002449","NANDO:2200029","ICD9:202.70","ICDO:9705/3","Orphanet:86886","MEDGEN:7025","MESH:D007119","ICD10CM:C86.5","ICDO:9767/1","UMLS:C0020981","EFO:0000255","ONCOTREE:AITL"],"synonyms":[{"name":"AILD","type":"exact"},{"name":"AILT","type":"exact"},{"name":"AITL","type":"related"},{"name":"T-cell lymphoma, AILD type","type":"exact"},{"name":"angioimmunoblastic T-cell lymphoma","type":"exact"},{"name":"angioimmunoblastic lymphadenopathy","type":"exact"},{"name":"angioimmunoblastic lymphadenopathy type T-cell lymphoma","type":"exact"},{"name":"angioimmunoblastic lymphadenopathy with Dysproteinemia","type":"exact"},{"name":"immunoblastic lymphadenopathy","type":"exact"},{"name":"lymphogranulomatosis X","type":"exact"}],"termid":"MONDO:0004977","xrefs":{"Monarch":{"xref_id":"0004977"}}}


id: MONDO:1011153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rheumatoid arthritis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatoid arthritis, non-human animal","termid":"MONDO:1010294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rheumatoid arthritis, dog","secondary_identifiers":["OMIA:000067-9615"],"termid":"MONDO:1011153","xrefs":{"Monarch":{"xref_id":"1011153"}}}


id: PBO:0064177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XD, pseudogene","termid":"PBO:0064177"}


id: PBO:0089312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glucan glucosidase Exg2","termid":"PBO:0089312"}


id: MONDO:0006248
data:
  {"annotated_genes":["SJAG_01156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"}]},"cv_name":"mondo","definition":"A gestational trophoblastic disorder characterized by marked enlargement of the chorionic villi, hyperplasia of the villous trophoblastic cells and hydropic changes.","definition_xrefs":["NCIT:C3110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trophoblastic neoplasm","termid":"MONDO:0002872"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"placenta neoplasm","termid":"MONDO:0021218"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01156":null},"genotype_count":0,"is_obsolete":false,"name":"hydatidiform mole","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:631","ICDO:9100/0","MedDRA:10020481","MEDGEN:9329","GARD:10263","EFO:1000298","OMIMPS:231090","SCTID:44782008","icd11.foundation:946166369","Orphanet:99927","ONCOTREE:MP","MESH:D006828","UMLS:C0020217"],"synonyms":[{"name":"HYDM","type":"related"},{"name":"hydatid mole","type":"exact"},{"name":"hydatidiform mole","type":"exact"},{"name":"hydatidiform mole, recurrent","type":"related"},{"name":"molar pregnancy","type":"exact"}],"termid":"MONDO:0006248","terms_by_termid":{"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0006248"}}}


id: PBO:0052472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kruppel like factor 17 pseudogene 1","termid":"PBO:0052472"}


id: PR:O14335
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein PLAGL1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein scr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1D7.02c","secondary_identifiers":["UniProtKB:O14335"],"synonyms":[{"name":"SPBC1D7.02c","type":"related"},{"name":"Spom972h-PLAGL1","type":"exact"}],"termid":"PR:O14335"}


id: PR:O14069
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L28 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00355","PANTHER:PTHR10544:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28e (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.06c","secondary_identifiers":["UniProtKB:O14069"],"synonyms":[{"name":"Spom972h-RPL28","type":"exact"}],"termid":"PR:O14069"}


id: MOD:00268
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to L-3',4',5'-trihydroxyphenylalanine.","definition_xrefs":["DeltaMass:0","RESID:AA0263","Unimod:425#Y","PubMed:9252331","ChEBI:141811","PubMed:12771378","PubMed:12686488","PubMed:9434739","PubMed:8554314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated tyrosine","termid":"MOD:00707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-3',4',5'-trihydroxyphenylalanine","synonyms":[{"name":"(S)-2-amino-3-(3,4,5-trihydroxyphenyl)propanoic acid","type":"exact"},{"name":"3,4,6-Trihydroxy-Phenylalanine (from Tyrosine) (TOPA)","type":"exact"},{"name":"35Hy2Tyr","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"L-3',4',5'-trihydroxyphenylalanine","type":"exact"},{"name":"L-3,4,5-TOPA","type":"exact"},{"name":"MOD_RES 3',4',5'-trihydroxyphenylalanine","type":"exact"},{"name":"dihydroxy","type":"related"}],"termid":"MOD:00268"}


id: MONDO:0003237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually polypoid, benign neoplasm that arises from the uterine corpus. It is characterized by the presence of benign epithelial glands embedded in benign fibromyomatous tissue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uterine corpus cancer","termid":"MONDO:0006003"},{"relation_name":"is_a","term_name":"adenomyoma","termid":"MONDO:0005635"},{"relation_name":"is_a","term_name":"benign neoplasm of corpus uteri","termid":"MONDO:0021525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenomyoma of uterine corpus","secondary_identifiers":["UMLS:C1336903","NCIT:C6338","MEDGEN:234465","DOID:4994"],"synonyms":[{"name":"adenomyoma of body of uterus","type":"exact"},{"name":"adenomyoma of corpus uteri","type":"exact"},{"name":"adenomyoma of the body of uterus","type":"exact"},{"name":"adenomyoma of the corpus uteri","type":"exact"},{"name":"adenomyoma of the uterine body","type":"exact"},{"name":"adenomyoma of the uterine corpus","type":"exact"},{"name":"adenomyoma of uterine body","type":"exact"},{"name":"adenomyoma of uterine corpus","type":"exact"},{"name":"body of uterus adenomyoma","type":"exact"},{"name":"corpus uteri adenomyoma","type":"exact"},{"name":"uterine body adenomyoma","type":"exact"},{"name":"uterine corpus adenomyoma","type":"exact"}],"termid":"MONDO:0003237","xrefs":{"Monarch":{"xref_id":"0003237"}}}


id: PBO:0056562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance 9 homologous recombination repair factor","termid":"PBO:0056562"}


id: GO:0022034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of rhombomere cells, resulting in the expansion of the cell population.","definition_xrefs":["GOC:dgh","GO_REF:0000021","GOC:jid","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere cell proliferation","termid":"GO:0022034"}


id: GO:1905920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of CoA-transferase activity.","definition_xrefs":["PMID:20164328","GO_REF:0000059","GOC:bc","GOC:TermGenie","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of CoA-transferase activity (obsolete GO:1905920)","synonyms":[{"name":"activation of CoA-transferase activity","type":"narrow"},{"name":"up regulation of CoA-transferase activity","type":"exact"},{"name":"up-regulation of CoA-transferase activity","type":"exact"},{"name":"upregulation of CoA-transferase activity","type":"exact"}],"termid":"GO:1905920"}


id: PBO:0047462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like 3","termid":"PBO:0047462"}


id: PBO:0063127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARP11 antisense RNA 1","termid":"PBO:0063127"}


id: MONDO:1010310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schmid metaphyseal chondrodysplasia dwarfism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schmid metaphyseal chondrodysplasia dwarfism, non-human animal","secondary_identifiers":["OMIA:001718"],"termid":"MONDO:1010310","xrefs":{"Monarch":{"xref_id":"1010310"}}}


id: PBO:0055749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA negative regulator of antiviral signaling","termid":"PBO:0055749"}


id: MONDO:0958357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central precocious puberty in male","termid":"MONDO:0958270"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary central precocious puberty in male","secondary_identifiers":["UMLS:C5816760","Orphanet:650092","MEDGEN:1853131"],"termid":"MONDO:0958357","xrefs":{"Monarch":{"xref_id":"0958357"}}}


id: PBO:0030107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_citrulline_level","termid":"PBO:0030107"}


id: PBO:0088513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lis1 homology and WD repeat protein","termid":"PBO:0088513"}


id: GO:0120306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of perturbations or damage to the actin cytoskeleton.","definition_xrefs":["PMID:32915139","GOC:krc","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to actin cytoskeletal stress","references_by_uniquename":{"PMID:32915139":null},"secondary_identifiers":["GO:1903956","GO:1904804","GO:1903957","GO:1904805"],"synonyms":[{"name":"cellular response to actin cytoskeleton stress","type":"exact"},{"name":"cellular response to latrunculin A","type":"narrow"},{"name":"cellular response to latrunculin B","type":"narrow"},{"name":"response to latrunculin A","type":"narrow"},{"name":"response to latrunculin B","type":"narrow"}],"termid":"GO:0120306"}


id: GO:2000356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of kidney smooth muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"},{"relation_name":"regulates","term_name":"kidney smooth muscle cell differentiation","termid":"GO:0072195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of kidney smooth muscle cell differentiation","termid":"GO:2000356"}


id: GO:0106233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a glycosome, a membrane-bounded organelle found in organisms from the order Kinetoplastida that houses the enzymes of glycolysis.","definition_xrefs":["PMID:8056787","PMID:15539076","PMID:28426655","PMID:31341002","GOC:ach"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycosome organization","synonyms":[{"name":"glycosome biogenesis","type":"related"},{"name":"glycosome organisation","type":"exact"},{"name":"glycosome organization and biogenesis","type":"related"}],"termid":"GO:0106233"}


id: MONDO:0016351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anti-HLA hyperimmunization is an increase in anti-HLA antigens mostly seen in chronic renal failure (CRF) patients that have undergone hemodialysis and polytransfusion.","definition_xrefs":["Orphanet:2194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"anti-HLA hyperimmunization","secondary_identifiers":["MEDGEN:929703","GARD:730","UMLS:C4304034"],"termid":"MONDO:0016351","xrefs":{"Monarch":{"xref_id":"0016351"}}}


id: PBO:0086819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YMR084W and adjacent ORF YMR085W are merged in related strains, and together are paralogous to glutamine-fructose-6-phosphate amidotransferase GFA1","termid":"PBO:0086819"}


id: FYPO:0009008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which a larger than normal proportion of cells is viable. In High Throughput Phenotyping this is typically assessed using phloxine as a dye.","definition_xrefs":["PMID:34984977","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"increased vegetative cell population viability","synonyms":[{"name":"increased cell population viability during vegetative growth","type":"exact"}],"termid":"FYPO:0009008"}


id: PBO:0075206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 18","termid":"PBO:0075206"}


id: GO:0102750
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: chlorophyll a + NADP = tetrahydrogeranylgeranyl-chlorophyll a + NADPH + H+.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete tetrahydrogeranylgeranyl-chlorophyll a reductase activity (obsolete GO:0102750)","termid":"GO:0102750"}


id: PBO:0012552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HP1 family chromodomain protein Swi6","termid":"PBO:0012552"}


id: MONDO:0032599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 15a","secondary_identifiers":["GARD:18469","OMIM:618204","DOID:0111960","UMLS:C4748694","MEDGEN:1648385"],"synonyms":[{"name":"IMD15A","type":"related"},{"name":"IMMUNODEFICIENCY 15A","type":"related"}],"termid":"MONDO:0032599","xrefs":{"Monarch":{"xref_id":"0032599"}}}


id: GO:0010323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of isopentenyl diphosphate produced via the methylerythritol (MEP) pathway (mevalonate-independent).","definition_xrefs":["PMID:16531478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","termid":"GO:0010322"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"negatively_regulates","term_name":"isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","termid":"GO:0019288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0006629"],"is_obsolete":false,"name":"negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","synonyms":[{"name":"down regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"exact"},{"name":"down-regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"exact"},{"name":"downregulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"exact"},{"name":"inhibition of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"narrow"},{"name":"negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"exact"}],"termid":"GO:0010323"}


id: PBO:0003244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tre1 family protein, involved in vacuolar protein degradation (predicted)","termid":"PBO:0003244"}


id: MONDO:0004732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma in situ involving a kidney.","definition_xrefs":["MONDO:patterns/carcinoma_in_situ"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"renal carcinoma","termid":"MONDO:0005206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"kidney carcinoma in situ","secondary_identifiers":["MEDGEN:673070","ICD9:233.9","UMLS:C0686172","SCTID:92624000","DOID:9234"],"synonyms":[{"name":"carcinoma in situ of kidney","type":"exact"},{"name":"kidney in situ carcinoma","type":"exact"},{"name":"stage 0 kidney carcinoma","type":"exact"}],"termid":"MONDO:0004732","xrefs":{"Monarch":{"xref_id":"0004732"}}}


id: MONDO:0004448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from the ciliated respiratory mucosa that lines the frontal sinus. It results from the invagination and proliferation of epithelial cells in the underlying stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inverted papilloma","termid":"MONDO:0002537"},{"relation_name":"is_a","term_name":"frontal sinus Schneiderian papilloma","termid":"MONDO:0003752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontal sinus inverted papilloma","secondary_identifiers":["DOID:8060","NCIT:C6842","UMLS:C1333644","MEDGEN:272638"],"synonyms":[{"name":"frontal sinus inverted papilloma","type":"exact"},{"name":"inverted papilloma of frontal sinus","type":"exact"},{"name":"inverted papilloma of the frontal sinus","type":"exact"}],"termid":"MONDO:0004448","xrefs":{"Monarch":{"xref_id":"0004448"}}}


id: PBO:0031160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_threonine_import","termid":"PBO:0031160"}


id: PBO:0036437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related GC kinase Nak1","termid":"PBO:0036437"}


id: PBO:0004264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt1","termid":"PBO:0004264"}


id: MONDO:0003999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pilocytic astrocytoma that occurs during adolescence.","definition_xrefs":["NCIT:C27081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood pilocytic astrocytoma","termid":"MONDO:0004000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile pilocytic astrocytoma","secondary_identifiers":["DOID:6811","Orphanet:673580","MEDGEN:128890","UMLS:C0280783"],"synonyms":[{"name":"juvenile pilocytic astrocytoma","type":"exact"}],"termid":"MONDO:0003999","xrefs":{"Monarch":{"xref_id":"0003999"}}}


id: MONDO:1012844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any XY sex reversal that occurs in dogs due to a mutation in the NR5A1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XY sex reversal, NR5A1-related, dog","secondary_identifiers":["OMIA:002296-9615"],"termid":"MONDO:1012844","xrefs":{"Monarch":{"xref_id":"1012844"}}}


id: GO:0072559
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An inflammasome complex that consists of three components, NLRP3 (NALP3), PYCARD and caspase-1. It is activated upon exposure to whole pathogens, as well as a number of structurally diverse pathogen- and danger-associated molecular patterns (PAMPs and DAMPs) and environmental irritants. Whole pathogens demonstrated to activate the NLRP3 inflammasome complex include the fungi Candida albicans and Saccharomyces cerevisiae, bacteria that produce pore-forming toxins, including Listeria monocytogenes and Staphylococcus aureus, and viruses such as Sendai virus, adenovirus, and influenza virus.","definition_xrefs":["GOC:add","GOC:BHF","PMID:20303873","GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex","termid":"GO:0061702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005829","GO:0005575"],"is_obsolete":false,"name":"NLRP3 inflammasome complex","synonyms":[{"name":"NALP3 inflammasome complex","type":"exact"}],"termid":"GO:0072559"}


id: GO:0045484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-lysine = L-glutamate + allysine.","definition_xrefs":["EC:2.6.1.36","RHEA:21200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"L-lysine 6-transaminase activity","secondary_identifiers":["MetaCyc:L-LYSINE-AMINOTRANSFERASE-RXN","KEGG_REACTION:R00457"],"synonyms":[{"name":"L-lysine aminotransferase activity","type":"related"},{"name":"L-lysine transaminase activity","type":"related"},{"name":"L-lysine-alpha-ketoglutarate 6-aminotransferase activity","type":"related"},{"name":"L-lysine-alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"L-lysine:2-oxoglutarate 6-aminotransferase activity","type":"related"},{"name":"lysine 6-aminotransferase activity","type":"exact"},{"name":"lysine epsilon-aminotransferase activity","type":"related"},{"name":"lysine epsilon-transaminase activity","type":"related"},{"name":"lysine:2-ketoglutarate 6-aminotransferase activity","type":"related"}],"termid":"GO:0045484"}


id: PBO:0040141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achaete-scute family bHLH transcription factor 4","termid":"PBO:0040141"}


id: GO:1990010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a compound eye retinal cell.","definition_xrefs":["PMID:12021768","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal cell apoptotic process","termid":"GO:1990009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye retinal cell apoptotic process","termid":"GO:1990010"}


id: MONDO:0850199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary immunodeficiency disease that results from defeciency in the number or function of CD56+CD3− NK cell in peripheral blood.","definition_xrefs":["DOID:0080709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"NK cell deficiency","secondary_identifiers":["MEDGEN:1644714","UMLS:C4693357"],"termid":"MONDO:0850199","xrefs":{"Monarch":{"xref_id":"0850199"}}}


id: PBO:0063864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piezo type mechanosensitive ion channel component 2","termid":"PBO:0063864"}


id: PBO:0013014
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fe Repressor of Activation","termid":"PBO:0013014"}


id: PR:O74828
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ESF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02698","PANTHER:PTHR12202:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein esf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.01c","secondary_identifiers":["UniProtKB:O74828"],"synonyms":[{"name":"Spom972h-ESF1","type":"exact"}],"termid":"PR:O74828"}


id: GO:1903475
data:
  {"annotated_genes":["SJAG_00228","SJAG_04597","SJAG_00279","SJAG_03025","SJAG_04887","SJAG_02431","SJAG_03045","SJAG_01787","SJAG_04703","SJAG_04077","SJAG_01805","SJAG_01943","SJAG_01143","SJAG_01894","SJAG_00082","SJAG_01732","SJAG_03596","SJAG_00268","SJAG_04982","SJAG_03703","SJAG_02592","SJAG_03048","SJAG_02392","SJAG_04498","SJAG_02700","SJAG_02838","SJAG_02831","SJAG_00845","SJAG_00700","SJAG_04930"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72916,75290,75939,76699,88580,92871,92920,95623,97981,98056,98251,99231,102762,102906,111175,112246,112687,118272,118864,119731],"is_not":false,"summary":null,"term":"GO:1903475"},{"annotations":[77772],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[104038,102707,94701,91093,96184,111139],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[94743,90322],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[119744,94139],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"Any actomyosin contractile ring assembly that is involved in mitotic cytokinesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin contractile ring assembly","termid":"GO:0000915"},{"relation_name":"is_a","term_name":"assembly of actomyosin apparatus involved in mitotic cytokinesis","termid":"GO:1902407"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_00845":null,"SJAG_01143":null,"SJAG_01732":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0007049","GO:0030036","GO:0044085","GO:0000281","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"}],"termid":"GO:1903475","terms_by_termid":{"GO:0120306":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null}}


id: MONDO:0016740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor of the central nervous system characterized by extra-embryonic differentiation along trophoblastic lines. The diagnosis requires the identification of cytotrophoblastic elements, as well as syncytiotrophoblastic giant cells. (WHO)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"},{"relation_name":"is_a","term_name":"choriocarcinoma","termid":"MONDO:0005207"},{"relation_name":"is_a","term_name":"central nervous system nongerminomatous germ cell tumor","termid":"MONDO:0020574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"choriocarcinoma of the central nervous system","secondary_identifiers":["GARD:20734","icd11.foundation:511691786","MEDGEN:234100","NCIT:C7012","Orphanet:252015","UMLS:C1332876"],"synonyms":[{"name":"central nervous system choriocarcinoma","type":"exact"},{"name":"central nervous system choriocarcinoma (disease)","type":"exact"},{"name":"choriocarcinoma of CNS","type":"exact"},{"name":"choriocarcinoma of the CNS","type":"exact"}],"termid":"MONDO:0016740","xrefs":{"Monarch":{"xref_id":"0016740"}}}


id: PR:O94579
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11599:SF16","OMA:SCHPO04818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.06","secondary_identifiers":["UniProtKB:O94579"],"synonyms":[{"name":"Spom972h-PSMA2","type":"exact"}],"termid":"PR:O94579"}


id: GO:0006979
data:
  {"annotated_genes":["SJAG_01162","SJAG_03886","SJAG_00141","SJAG_00984","SJAG_03903","SJAG_05181","SJAG_02044","SJAG_00027","SJAG_00419","SJAG_01292","SJAG_02485","SJAG_04399","SJAG_01734","SJAG_03166","SJAG_06611","SJAG_02249","SJAG_00668","SJAG_04036","SJAG_03653","SJAG_06621","SJAG_02135","SJAG_02495","SJAG_03303","SJAG_04632","SJAG_03828","SJAG_04403","SJAG_00365","SJAG_04953","SJAG_01855","SJAG_02573","SJAG_03414","SJAG_04788","SJAG_04823","SJAG_02592","SJAG_01199","SJAG_04125","SJAG_00996","SJAG_01216","SJAG_02945","SJAG_04311","SJAG_01084","SJAG_02433","SJAG_03330","SJAG_06622","SJAG_02515","SJAG_03896","SJAG_02858","SJAG_03924","SJAG_05014"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109203,118691,95531,105401,100337,117760],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[109301,90516,67526,109300,96320,108165,77177,77901,109303,77373,109305,95897,92487,70692,97954,88884,76202,102198,64195,109304,109302,74043,91215,75217,73681,90415,93891,79405,68605,109306,75540,114852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034599"},{"annotations":[91853,90126,90518],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:2000815"},{"annotations":[61054,99606,69273,58105,65335,89306,93466,89727,74671],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["GOC:jl","PMID:12115731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00141":null,"SJAG_00365":null,"SJAG_00419":null,"SJAG_00668":null,"SJAG_00984":null,"SJAG_00996":null,"SJAG_01084":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_01734":null,"SJAG_01855":null,"SJAG_02044":null,"SJAG_02135":null,"SJAG_02249":null,"SJAG_02433":null,"SJAG_02485":null,"SJAG_02495":null,"SJAG_02515":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02858":null,"SJAG_02945":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03330":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03828":null,"SJAG_03886":null,"SJAG_03896":null,"SJAG_03903":null,"SJAG_03924":null,"SJAG_04036":null,"SJAG_04125":null,"SJAG_04311":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05014":null,"SJAG_05181":null,"SJAG_06611":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxidative stress","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006979","terms_by_termid":{"GO:0019430":null,"GO:0034599":null,"GO:0061692":null,"GO:2000815":null}}


id: GO:0005967
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A mitochondrial complex that carries out the oxidative decarboxylation of pyruvate to form acetyl-CoA in eukaryotes; includes subunits possessing three catalytic activities: pyruvate dehydrogenase (E1), dihydrolipoamide S-acetyltransferase (E2), and dihydrolipoamide dehydrogenase (E3). The This Eukaryotic form usually contains more subunits than its bacterial counterpart; for example, one known complex contains 30 E1 dimers, 60 E2 monomers, and 6 E3 dimers as well as a few copies of pyruvate dehydrogenase kinase and pyruvate dehydrogenase phosphatase.","definition_xrefs":["ISBN:0716720094","ISBN:0471331309","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial pyruvate dehydrogenase complex (obsolete GO:0005967)","synonyms":[{"name":"pyruvate dehydrogenase complex (lipoamide)","type":"broad"}],"termid":"GO:0005967"}


id: FYPO:0002899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"normal protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"}],"termid":"FYPO:0002899"}


id: PBO:0030322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_palmitoyl-CoA_ligase_activity","termid":"PBO:0030322"}


id: PBO:0016923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug143","termid":"PBO:0016923"}


id: PBO:0117385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like domain 3, 1-acylglycerol-3-phosphate O-acyltransferase","termid":"PBO:0117385"}


id: PBO:0074403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 10 like 2A","termid":"PBO:0074403"}


id: GO:0010252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process that maintains an endogenous steady-state concentration of primary auxin, or constant level of auxin in a biological system, by a number of biochemical processes including transport, biosynthesis, catabolism and conjugation.","definition_xrefs":["PMID:22504182"],"gene_count":0,"genotype_count":0,"name":"obsolete auxin homeostasis (obsolete GO:0010252)","termid":"GO:0010252"}


id: PBO:0006213
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allele","termid":"PBO:0006213"}


id: PBO:0067011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 19, pseudogene","termid":"PBO:0067011"}


id: GO:0015430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + glycerol-3-phosphate(out) = ADP + phosphate + glycerol-3-phosphate(in).","definition_xrefs":["RHEA:21668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol-3-phosphate transmembrane transporter activity","termid":"GO:0015169"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type glycerol-3-phosphate transporter activity","secondary_identifiers":["GO:0070812","GO:0015610","EC:7.6.2.10","MetaCyc:ABC-34-RXN"],"synonyms":[{"name":"ABC-type glycerol 3-phosphate transporter","type":"exact"},{"name":"ATP-dependent glycerol-2-phosphate transmembrane transporter activity","type":"narrow"},{"name":"ATPase-coupled glycerol-2-phosphate transmembrane transporter activity","type":"narrow"},{"name":"ATPase-coupled glycerol-3-phosphate transmembrane transporter activity","type":"related"},{"name":"glycerol phosphate-importing ATPase activity","type":"narrow"},{"name":"glycerol-2-phosphate-transporting ATPase activity","type":"narrow"},{"name":"glycerol-3-phosphate ABC transporter","type":"exact"},{"name":"glycerol-3-phosphate-transporting ATPase","type":"related"},{"name":"glycerol-phosphate porter activity","type":"narrow"}],"termid":"GO:0015430"}


id: SO:0001844
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element bound by copper ion-sensing transcription factors such as S. cerevisiae Mac1p or S. pombe Cuf1; the consensus sequence is HTHNNGCTGD (more specifically TTTGCKCR in budding yeast).","definition_xrefs":["PMID:9188496","PMID:9211922","PMID:10593913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CuRE","synonyms":[{"name":"copper-response element","type":"exact"}],"termid":"SO:0001844"}


id: PBO:0047017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A20, pseudogene","termid":"PBO:0047017"}


id: PBO:0066594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member H","termid":"PBO:0066594"}


id: PBO:0090447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, implicated in DNA repair","termid":"PBO:0090447"}


id: PBO:0076830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere repeat binding bouquet formation protein 1","termid":"PBO:0076830"}


id: GO:0008503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with benzodiazepines, a class of drugs with hypnotic, anxiolytic, anticonvulsive, amnestic and myorelaxant properties, to initiate a change in cell activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"benzodiazepine receptor activity","termid":"GO:0008503"}


id: GO:0001951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Uptake of D-glucose into the blood by absorption from the small intestine.","definition_xrefs":["GOC:mgi_curators","PMID:5601832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal hexose absorption","termid":"GO:0106001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal D-glucose absorption","termid":"GO:0001951"}


id: GO:0070818
data:
  {"annotated_genes":["SJAG_02876"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004729"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protoporphyrinogen IX + acceptor = protoporphyrin IX + reduced acceptor.","definition_xrefs":["GOC:mah","PMID:19583219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02876":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"protoporphyrinogen oxidase activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"protoporphyrinogen IX oxidase activity","type":"related"},{"name":"protoporphyrinogen-IX oxidase activity","type":"related"},{"name":"protoporphyrinogenase activity","type":"related"}],"termid":"GO:0070818","terms_by_termid":{"GO:0004729":null}}


id: MONDO:0006639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, usually large (greater than 5cm), malignant epithelial tumor arising from the adrenal cortical cells. Symptoms are usually related to the excessive production of hormones, and include Cushing's syndrome and virilism in women. Common sites of metastasis include liver, lung, bone, and retroperitoneal lymph nodes. Advanced radiologic procedures have enabled the detection of small tumors, resulting in the improvement of the 5-year survival.","definition_xrefs":["NCIT:C9325"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete ACTH-independent Cushing syndrome due to rare cortisol-producing adrenal tumor (obsolete MONDO:0018627)","termid":"MONDO:0018627"},{"relation_name":"is_a","term_name":"vascular cancer","termid":"MONDO:0002095"},{"relation_name":"is_a","term_name":"adrenal carcinoma","termid":"MONDO:0002814"},{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"},{"relation_name":"is_a","term_name":"malignant tumor of adrenal cortex","termid":"MONDO:0021312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"adrenal cortex carcinoma","secondary_identifiers":["Orphanet:1501","NCIT:C2858","DOID:660","GARD:558","DOID:3948","HP:0006744","ICDO:8370/3","MEDGEN:104917","UMLS:C0206686","MedDRA:10001388","SCTID:255035007","DOID:3959","NANDO:2200073","ONCOTREE:ACC","EFO:1000796"],"synonyms":[{"name":"ACC","type":"exact"},{"name":"Adenoid Cystic Carcinoma","type":"exact"},{"name":"adenocarcinoma, adrenocortical, malignant","type":"exact"},{"name":"adrenal cortex adenocarcinoma","type":"exact"},{"name":"adrenal cortex cancer","type":"broad"},{"name":"adrenal cortex carcinoma","type":"exact"},{"name":"adrenal cortical adenocarcinoma","type":"exact"},{"name":"adrenal cortical carcinoma","type":"exact"},{"name":"adrenal cortical carcinoma (morphologic abnormality)","type":"exact"},{"name":"adrenal cortical tumors","type":"broad"},{"name":"adrenal cortical tumours","type":"broad"},{"name":"adrenocortical cancer","type":"broad"},{"name":"adrenocortical carcinoma","type":"exact"},{"name":"adrenocortical carcinoma (disease)","type":"exact"},{"name":"cancer of the adrenal cortex","type":"broad"},{"name":"carcinoma of adrenal cortex","type":"exact"},{"name":"carcinoma of the adrenal cortex","type":"exact"},{"name":"carcinoma, adrenocortical, malignant","type":"exact"},{"name":"cortical cell carcinoma","type":"exact"},{"name":"malignant adrenocortical tumor","type":"broad"},{"name":"malignant adrenocortical tumour","type":"broad"},{"name":"malignant neoplasm of adrenal cortex","type":"broad"},{"name":"malignant tumor of adrenal cortex","type":"broad"},{"name":"malignant tumour of adrenal cortex","type":"broad"}],"termid":"MONDO:0006639","xrefs":{"Monarch":{"xref_id":"0006639"}}}


id: GO:0106439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: L-lysine(out) + L-arginine(in) = L-lysine(in) + L-arginine(out).","definition_xrefs":["PMID:10903140","RHEA:70827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine transmembrane transporter activity","termid":"GO:0015189"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"L-arginine transmembrane transporter activity","termid":"GO:0061459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-lysine:L-arginine antiporter activity","termid":"GO:0106439"}


id: PBO:0088845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit V","termid":"PBO:0088845"}


id: GO:0034744
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the tumor suppressor protein adenomatous polyposis coli (APC), the small GTPase Cdc42, and the Rac1 and Cdc42 effector IQGAP1; may play a role in cytoskeleton organization and cell migration.","definition_xrefs":["PMID:15572129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"APC-IQGAP1-Cdc42 complex","termid":"GO:0034744"}


id: SO:0001139
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Gamma turns, defined for 3 residues i, i+1, i+2 if a hydrogen bond exists between residues i and i+2 and the phi and psi angles of residue i+1 fall within 40 degrees: phi(i+1)=75.0 - psi(i+1)=-64.0.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma_turn","termid":"SO:0001138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"gamma_turn_classic","secondary_identifiers":["BS:00220"],"synonyms":[{"name":"classic gamma turn","type":"exact"},{"name":"gamma turn classic","type":"exact"}],"termid":"SO:0001139"}


id: PBO:0003069
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds rDIS 5'-AGGTAAGGGTAATGCAC-3'","termid":"PBO:0003069"}


id: MONDO:0032684
data:
  {"annotated_genes":["SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86402],"is_not":false,"summary":null,"term":"MONDO:0032684"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02908":null},"genotype_count":0,"is_obsolete":false,"name":"intrauterine growth retardation, metaphyseal dysplasia, adrenal hypoplasia congenita, genital anomalies, and immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684464","OMIM:618336","UMLS:C5193036"],"synonyms":[{"name":"IMAGE-I syndrome","type":"exact"},{"name":"IMAGEI","type":"related"},{"name":"INTRAUTERINE GROWTH RETARDATION, METAPHYSEAL DYSPLASIA, ADRENAL HYPOPLASIA CONGENITA, GENITAL ANOMALIES, AND IMMUNODEFICIENCY","type":"related"},{"name":"Imagei Syndrome","type":"related"}],"termid":"MONDO:0032684","terms_by_termid":{"MONDO:0032684":null},"xrefs":{"Monarch":{"xref_id":"0032684"}}}


id: PBO:0039835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 5","termid":"PBO:0039835"}


id: FYPO:0006021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:28366642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth","termid":"FYPO:0007536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein distribution along RNA polymerase II-transcribed genes","synonyms":[{"name":"normal protein distribution across RNA polymerase II-transcribed genes","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-regulated genes","type":"exact"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during mitotic cell cycle","type":"related"},{"name":"normal protein distribution along RNA polymerase II-transcribed genes during vegetative growth","type":"exact"},{"name":"normal protein distribution in chromatin along RNA polymerase II-transcribed genes","type":"exact"},{"name":"normal protein localization to chromatin along RNA polymerase II-transcribed genes","type":"exact"}],"termid":"FYPO:0006021"}


id: PR:Q10339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exocyst complex component 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12542:SF7","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component exo70 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.20","secondary_identifiers":["UniProtKB:Q10339"],"synonyms":[{"name":"SPBC106.20","type":"related"},{"name":"Spom972h-EXOC7","type":"exact"}],"termid":"PR:Q10339"}


id: SO:1000156
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An interchromosomal transposition whereby a copy of the segment between the first two breaks listed is inserted at the third break; the insertion is in cytologically inverted orientation with respect to its flanking segment.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interchromosomal_transposition","termid":"SO:1000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted_interchromosomal_transposition","synonyms":[{"name":"(Drosophila)iTp","type":"related"},{"name":"inverted interchromosomal transposition","type":"exact"}],"termid":"SO:1000156"}


id: PBO:0065912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGAP1L divergent transcript","termid":"PBO:0065912"}


id: GO:0140571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Oxidation of Fe(3+) to Fe(2+) on the outer side of a membrane coupled to the reduction of L-ascorbate to monodehydro-L-ascorbate radical on the inner side of a membrane. Electrons get transferred across the membrane during the reaction.","definition_xrefs":["PMID:24449903","RHEA:30403","PMID:16911521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreduction-driven active transmembrane transporter activity","termid":"GO:0015453"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions","termid":"GO:0016722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0005215","GO:0003674","GO:0016491","GO:0022857"],"is_obsolete":false,"name":"transmembrane ascorbate ferrireductase activity","secondary_identifiers":["MetaCyc:RXN-15598","EC:7.2.1.3"],"synonyms":[{"name":"L-ascorbate-cytochrome-b5 reductase activity","type":"exact"},{"name":"L-ascorbate:ferricytochrome-b5 oxidoreductase activity","type":"exact"},{"name":"ascorbate-cytochrome b5 reductase activity","type":"exact"}],"termid":"GO:0140571"}


id: PBO:0071348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 6","termid":"PBO:0071348"}


id: PBO:0054638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2043","termid":"PBO:0054638"}


id: MONDO:0010543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Barth syndrome (BTHS) is an inborn error of phospholipid metabolism characterized by dilated cardiomyopathy (DCM), skeletal myopathy, neutropenia, growth delay and organic aciduria.","definition_xrefs":["Orphanet:111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"},{"relation_name":"is_a","term_name":"syndromic dyslipidemia","termid":"MONDO:0015905"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0002525","MONDO:0005336","MONDO:0004736","MONDO:0005046","MONDO:0005066","MONDO:0005570","MONDO:0004069"],"is_obsolete":false,"name":"Barth syndrome","secondary_identifiers":["icd11.foundation:452199926","MEDGEN:107893","DOID:0050476","GARD:5890","MESH:D056889","NANDO:2200751","NANDO:1200991","NCIT:C84585","SCTID:297231002","UMLS:C0574083","OMIM:302060","ICD10CM:E78.71"],"synonyms":[{"name":"3-Methylglutaconic aciduria, type 2","type":"related"},{"name":"3-Methylglutaconicaciduria type 2","type":"exact"},{"name":"3-Methylglutaconicaciduria type II","type":"exact"},{"name":"3-methylglutaconic aciduria type 2","type":"exact"},{"name":"3-methylglutaconic aciduria type II","type":"related"},{"name":"BARTH syndrome","type":"related"},{"name":"BTHS","type":"exact"},{"name":"Barth syndrome","type":"exact"},{"name":"Barth syndrome, X-linked recessive","type":"exact"},{"name":"MGA type 2","type":"exact"},{"name":"MGA type II","type":"exact"},{"name":"MGA2","type":"exact"},{"name":"Mga, type 2","type":"related"},{"name":"TAZ defect","type":"related"},{"name":"X-linked cardioskeletal myopathy and neutropenia","type":"exact"},{"name":"cardioskeletal myopathy with neutropenia and abnormal mitochondria","type":"exact"},{"name":"cardioskeletal myopathy-neutropenia syndrome","type":"exact"}],"termid":"MONDO:0010543","xrefs":{"Monarch":{"xref_id":"0010543"}}}


id: PR:Q96VG1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TP53-regulated inhibitor of apoptosis 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02571","PANTHER:PTHR21329:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C119.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.18","secondary_identifiers":["UniProtKB:Q96VG1"],"synonyms":[{"name":"Spom972h-TRIAP1","type":"exact"}],"termid":"PR:Q96VG1"}


id: PBO:0071434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 40","termid":"PBO:0071434"}


id: GO:0030753
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + xanthotoxol = S-adenosyl-L-homocysteine + xanthotoxin. Xanthotoxol is also known as 8-hydroxyfuranocoumarin and xanthotoxin as 8-methoxyfuranocoumarin.","definition_xrefs":["EC:2.1.1.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"8-hydroxyfuranocoumarin 8-O-methyltransferase activity","secondary_identifiers":["GO:0030765","KEGG_REACTION:R02982"],"synonyms":[{"name":"S-adenosyl-L-methionine:8-hydroxyfuranocoumarin 8-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:8-hydroxyfurocoumarin 8-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:xanthotoxol O-methyltransferase activity","type":"related"},{"name":"XMT activity","type":"related"},{"name":"furanocoumarin 8-O-methyl-transferase activity","type":"related"},{"name":"furanocoumarin 8-methyltransferase activity","type":"related"},{"name":"xanthotoxol 8-O-methyltransferase activity","type":"related"},{"name":"xanthotoxol O-methyltransferase activity","type":"exact"},{"name":"xanthotoxol methyltransferase activity","type":"related"}],"termid":"GO:0030753"}


id: PBO:0065071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prickle planar cell polarity protein 2","termid":"PBO:0065071"}


id: PBO:0047240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 234 member B","termid":"PBO:0047240"}


id: PBO:0053120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 10","termid":"PBO:0053120"}


id: MONDO:0100220
data:
  {"annotated_genes":["SJAG_03626"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86196],"is_not":false,"summary":null,"term":"MONDO:0100220"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Rajab interstitial lung disease with brain calcifications","termid":"MONDO:0100214"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03626":null},"genotype_count":0,"is_obsolete":false,"name":"Rajab interstitial lung disease with brain calcifications 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436603","OMIM:619013","MEDGEN:1770895","GARD:18298"],"synonyms":[{"name":"RAJAB INTERSTITIAL LUNG DISEASE WITH BRAIN CALCIFICATIONS 2","type":"exact"},{"name":"RILDBC2","type":"exact"}],"termid":"MONDO:0100220","terms_by_termid":{"MONDO:0100220":null},"xrefs":{"Monarch":{"xref_id":"0100220"}}}


id: MONDO:0001500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disorder characterized by a strong and persistent cross-gender identification (such as stating a desire to be the other sex or frequently passing as the other sex) coupled with persistent discomfort with his or her sex (manifested in adults, for example, as a preoccupation with altering primary and secondary sex characteristics through hormonal manipulation or surgery).","definition_xrefs":["NCIT:C94362"],"gene_count":0,"genotype_count":0,"name":"obsolete gender identity disorder (obsolete MONDO:0001500)","secondary_identifiers":["SCTID:87991007","ICD9:302.85","ICD9:302.89","EFO:0008587","DOID:1234","ICD9:302.6","ICD9:302.8"],"termid":"MONDO:0001500","xrefs":{"Monarch":{"xref_id":"0001500"}}}


id: MOD:00259
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and the 5'-end of DNA through a phosphodiester bond to form O4'-(phospho-5'-DNA)-L-tyrosine.","definition_xrefs":["PubMed:1861973","PubMed:2940511","PubMed:3684578","RESID:AA0254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-DNA)-L-tyrosine","synonyms":[{"name":"(S)-2-amino-3-[4-(5'-deoxyribonucleic acid phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"ACT_SITE O-(5'-phospho-DNA)-tyrosine intermediate","type":"exact"},{"name":"MOD_RES O-(5'-phospho-DNA)-tyrosine","type":"exact"},{"name":"O4'-(phospho-5'-DNA)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-DNA phosphodiester","type":"exact"}],"termid":"MOD:00259"}


id: GO:0004810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a tRNA precursor + ATP + 2 CTP = a tRNA with a 3' CCA end + 3 diphosphate.","definition_xrefs":["RHEA:14433","PMID:2247609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0140098","GO:0016740","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"CCA tRNA nucleotidyltransferase activity","secondary_identifiers":["GO:0016437","MetaCyc:TRNA-CYTIDYLYLTRANSFERASE-RXN","EC:2.7.7.72"],"synonyms":[{"name":"ATP(CTP)-tRNA nucleotidyltransferase","type":"broad"},{"name":"ATP(CTP):tRNA nucleotidyltransferase activity","type":"broad"},{"name":"CCA-adding enzyme activity","type":"related"},{"name":"CTP(ATP):tRNA nucleotidyltransferase","type":"broad"},{"name":"CTP:tRNA cytidylyltransferase activity","type":"broad"},{"name":"ribonucleic cytidylic cytidylic adenylic pyrophosphorylase","type":"broad"},{"name":"ribonucleic cytidylyltransferase","type":"broad"},{"name":"tRNA CCA-diphosphorylase activity","type":"related"},{"name":"tRNA adenylyl(cytidylyl)transferase","type":"broad"},{"name":"tRNA cytidylyltransferase activity","type":"related"},{"name":"tRNA-nucleotidyltransferase activity","type":"broad"},{"name":"transfer RNA adenylyltransferase","type":"broad"},{"name":"transfer ribonucleate adenyltransferase activity","type":"related"},{"name":"transfer ribonucleate adenylyltransferase","type":"broad"},{"name":"transfer ribonucleate nucleotidyltransferase","type":"broad"},{"name":"transfer ribonucleic acid nucleotidyl transferase","type":"broad"},{"name":"transfer ribonucleic adenylyl (cytidylyl) transferase","type":"broad"},{"name":"transfer ribonucleic-terminal trinucleotide nucleotidyltransferase","type":"broad"},{"name":"transfer-RNA nucleotidyltransferase","type":"broad"}],"termid":"GO:0004810"}


id: GO:0048386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retinoic acid receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of retinoic acid receptor signaling pathway","termid":"GO:0048385"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of retinoic acid receptor signaling pathway","synonyms":[{"name":"activation of retinoic acid receptor signaling pathway","type":"narrow"},{"name":"positive regulation of RAR signaling pathway","type":"exact"},{"name":"positive regulation of retinoic acid receptor signalling pathway","type":"exact"},{"name":"stimulation of retinoic acid receptor signaling pathway","type":"narrow"},{"name":"up regulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"up-regulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"upregulation of retinoic acid receptor signaling pathway","type":"exact"}],"termid":"GO:0048386"}


id: MONDO:0004064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A uveal melanoma that arises from the iris. It is the most common primary malignant neoplasm of the iris. The majority arise in preexisting nevi.","definition_xrefs":["NCIT:C9088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iris cancer","termid":"MONDO:0002658"},{"relation_name":"is_a","term_name":"uveal melanoma","termid":"MONDO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"iris melanoma","secondary_identifiers":["MEDGEN:87559","UMLS:C0346373","SCTID:255012009","MONDO:0021433","DOID:6994"],"synonyms":[{"name":"iris malignant melanoma","type":"exact"},{"name":"iris melanoma","type":"exact"},{"name":"iris melanoma (disease)","type":"exact"},{"name":"malignant iris melanoma","type":"related"},{"name":"malignant melanoma of iris","type":"exact"},{"name":"malignant melanoma of the iris","type":"exact"},{"name":"melanoma (disease) of iris","type":"exact"},{"name":"melanoma of iris","type":"exact"},{"name":"melanoma of the iris","type":"exact"}],"termid":"MONDO:0004064","xrefs":{"Monarch":{"xref_id":"0004064"}}}


id: PBO:0079442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taurine up-regulated 1","termid":"PBO:0079442"}


id: MONDO:0100509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy in which the cause of the disease is biallelic variants in the IFT140 gene.","definition_xrefs":["PMID:22503633","PMID:26359340","PMID:23418020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFT140-related recessive ciliopathy","synonyms":[{"name":"IFT140-related recessive ciliopathy","type":"exact"},{"name":"retinitis pigmentosa 80","type":"narrow"},{"name":"short-rib thoracic dysplasia 9 with or without polydactyly","type":"narrow"}],"termid":"MONDO:0100509","xrefs":{"Monarch":{"xref_id":"0100509"}}}


id: PBO:0076551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 2 pseudogene 3","termid":"PBO:0076551"}


id: PBO:0077017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin 4","termid":"PBO:0077017"}


id: GO:0039545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway in a host organism by reducing the activity of host MAVS (mitochondrial antiviral signaling protein). MAVS is a signal transducer that lies downstream of the viral RNA receptors MDA-5 and RIG-I to coordinate host innate immune responses.","definition_xrefs":["PMID:17438296","PMID:22674996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity","secondary_identifiers":["VZ:704"],"synonyms":[{"name":"inhibition of host MAVS by virus","type":"related"},{"name":"suppression by virus of host MAVS activity","type":"related"},{"name":"suppression by virus of host mitochondrial antiviral-signaling protein","type":"related"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity","type":"narrow"}],"termid":"GO:0039545"}


id: FYPO:0001162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal under aerobic conditions and in a medium containing raffinose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002058","FYPO:0002060","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on raffinose carbon source","synonyms":[{"name":"decreased aerobic cell growth on raffinose carbon source","type":"narrow"},{"name":"decreased growth on raffinose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on raffinose carbon source","type":"exact"},{"name":"reduced cell growth on raffinose carbon source","type":"exact"},{"name":"slow aerobic cell growth on raffinose carbon source","type":"narrow"}],"termid":"FYPO:0001162"}


id: PBO:0046243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1","termid":"PBO:0046243"}


id: PBO:0030893
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_starvation_during_vegetative_growth","termid":"PBO:0030893"}


id: MONDO:0001770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastrin secretion abnormality","secondary_identifiers":["UMLS:C0000774","ICD9:251.5","MEDGEN:507382","SCTID:47344007","DOID:13656"],"termid":"MONDO:0001770","xrefs":{"Monarch":{"xref_id":"0001770"}}}


id: GO:0071271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-butanol, an alkyl primary alcohol with the formula C4H10O.","definition_xrefs":["GOC:mah","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"1-butanol metabolic process","termid":"GO:0071270"},{"relation_name":"is_a","term_name":"fatty alcohol biosynthetic process","termid":"GO:1903175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"1-butanol biosynthetic process","synonyms":[{"name":"1-butanol anabolism","type":"exact"},{"name":"1-butanol biosynthesis","type":"exact"},{"name":"1-butanol formation","type":"exact"},{"name":"1-butanol synthesis","type":"exact"},{"name":"butan-1-ol biosynthetic process","type":"exact"},{"name":"butanol biosynthetic process","type":"broad"}],"termid":"GO:0071271"}


id: GO:0055035
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer membrane of any thylakoid within a plastid.","definition_xrefs":["GOC:jid","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"is_a","term_name":"thylakoid membrane","termid":"GO:0042651"},{"relation_name":"part_of","term_name":"plastid thylakoid","termid":"GO:0031976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"plastid thylakoid membrane","termid":"GO:0055035"}


id: MONDO:0005662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection by parasites of the genus balantidium. The presence of Balantidium in the large intestine leads to diarrhea; dysentery; and occasionally ulcer.","definition_xrefs":["MESH:D001447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"},{"relation_name":"is_a","term_name":"Ciliophora infectious disease","termid":"MONDO:0005704"},{"relation_name":"is_a","term_name":"parasitic intestinal disorder","termid":"MONDO:0024270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"balantidiasis","secondary_identifiers":["GARD:809","ICD10CM:A07.0","icd11.foundation:2090337975","SCTID:57725006","MedDRA:10004080","MEDGEN:2540","NCIT:C84583","Orphanet:1223","EFO:0007163","UMLS:C0004692","DOID:12386","ICD9:007.0"],"synonyms":[{"name":"B coli infection","type":"related"},{"name":"Balantidiases","type":"related"},{"name":"Balantidium coli infection","type":"related"},{"name":"Human balantidiasis","type":"related"},{"name":"balantidiosis","type":"exact"},{"name":"ciliary dysentery","type":"exact"},{"name":"large-intestinal infection with Balantidium coli","type":"related"}],"termid":"MONDO:0005662","xrefs":{"Monarch":{"xref_id":"0005662"}}}


id: GO:0075041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of turgor formation in the symbiont appressorium.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of establishment of turgor in appressorium (obsolete GO:0075041)","termid":"GO:0075041"}


id: GO:2000479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cAMP-dependent protein kinase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein serine/threonine kinase activity","termid":"GO:0071900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cAMP-dependent protein kinase activity","synonyms":[{"name":"regulation of 3',5' cAMP-dependent protein kinase activity","type":"exact"},{"name":"regulation of 3',5'-cAMP-dependent protein kinase activity","type":"exact"},{"name":"regulation of AMPK","type":"related"},{"name":"regulation of ATP:protein phosphotransferase (cAMP-dependent) activity","type":"exact"},{"name":"regulation of PKA","type":"related"},{"name":"regulation of PKA C","type":"related"},{"name":"regulation of STK22","type":"related"},{"name":"regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity","type":"exact"},{"name":"regulation of cAMP-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"regulation of cyclic AMP-dependent protein kinase activity","type":"exact"},{"name":"regulation of protein kinase A activity","type":"related"}],"termid":"GO:2000479"}


id: PBO:0052700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 1","termid":"PBO:0052700"}


id: GO:1904761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myofibroblast differentiation.","definition_xrefs":["GOC:BHF_miRNA","GOC:TermGenie","GO_REF:0000058","GOC:BHF","PMID:20533548","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of myofibroblast differentiation","termid":"GO:1904760"},{"relation_name":"negatively_regulates","term_name":"myofibroblast differentiation","termid":"GO:0036446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myofibroblast differentiation","synonyms":[{"name":"down regulation of myofibroblast cell differentiation","type":"exact"},{"name":"down regulation of myofibroblast differentiation","type":"exact"},{"name":"down-regulation of myofibroblast cell differentiation","type":"exact"},{"name":"down-regulation of myofibroblast differentiation","type":"exact"},{"name":"downregulation of myofibroblast cell differentiation","type":"exact"},{"name":"downregulation of myofibroblast differentiation","type":"exact"},{"name":"inhibition of myofibroblast cell differentiation","type":"narrow"},{"name":"inhibition of myofibroblast differentiation","type":"narrow"},{"name":"negative regulation of myofibroblast cell differentiation","type":"exact"}],"termid":"GO:1904761"}


id: PBO:0044555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl-tRNA synthetase 1","termid":"PBO:0044555"}


id: PR:O74525
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC70.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C70.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.04c","synonyms":[{"name":"Spom972h-SPCC70.04c","type":"exact"}],"termid":"PR:O74525"}


id: MONDO:0004161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of uterine corpus leiomyoma characterized by zones of hemorrhagic infarction surrounded by hypercellular areas. It usually develops in women of childbearing years, particularly those that are pregnant, post-partum, or taking oral contraceptives.","definition_xrefs":["NCIT:C40165"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"uterine corpus cellular leiomyoma","termid":"MONDO:0004162"},{"relation_name":"is_a","term_name":"uterine corpus leiomyoma","termid":"MONDO:0007886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus apoplectic leiomyoma","secondary_identifiers":["DOID:7241","UMLS:C1519852","MEDGEN:274364"],"synonyms":[{"name":"uterine corpus hemorrhagic cellular leiomyoma","type":"exact"},{"name":"uterine corpus leiomyoma with apoplectic change","type":"exact"}],"termid":"MONDO:0004161","xrefs":{"Monarch":{"xref_id":"0004161"}}}


id: PBO:0113741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTNAP1 pseudogene 1","termid":"PBO:0113741"}


id: PBO:0087979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA ligase; required for tRNA splicing and for both splicing and translation of HAC1 mRNA in the UPR; has phosphodiesterase, polynucleotide kinase, and ligase activities; involved in turnover of tRNA introns; localized at the inner nuclear envelope and cytoplasm","termid":"PBO:0087979"}


id: PBO:0083537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YBR131W; identified by gene-trapping, microarray analysis, and genome-wide homology searches","termid":"PBO:0083537"}


id: FYPO:0000805
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119543],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0006433"},{"annotations":[119718,119709,119707,119721,119706],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001784"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endoplasmic reticulum (ER) organization is abnormal. ER organization results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum.","definition_xrefs":["GO:0007029","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system organization","termid":"FYPO:0000804"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":6,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal endoplasmic reticulum organization","references_by_uniquename":{"PMID:25318672":null,"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_00426","SJAG_01906","SJAG_03940","SJAG_02763"],"single_locus_genotype_uniquenames":["ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1delta","nem1delta"],"synonyms":[{"name":"abnormal ER organization","type":"exact"},{"name":"abnormal endoplasmic reticulum organisation","type":"exact"},{"name":"abnormal endoplasmic reticulum organization during mitotic cell cycle","type":"related"},{"name":"abnormal endoplasmic reticulum organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000805","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001784":null,"FYPO:0006433":null,"FYPO_EXT:0000001":null}}


id: PBO:0044121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 7, pseudogene","termid":"PBO:0044121"}


id: PBO:0071598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 15","termid":"PBO:0071598"}


id: PBO:0089501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Ace2","termid":"PBO:0089501"}


id: PBO:0017455
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-input_of","termid":"PBO:0017455"}


id: MONDO:0037253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A stromal tumor that arises from the ovary and is characterized by the presence of cells that contain lipid and resemble theca cells. The vast majority of cases are benign.","definition_xrefs":["NCIT:C66989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian sex cord-stromal tumor","termid":"MONDO:0021657"},{"relation_name":"is_a","term_name":"thecoma","termid":"MONDO:0037252"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian thecoma","secondary_identifiers":["MEDGEN:364155","UMLS:C1882229","SCTID:254864005"],"synonyms":[{"name":"ovarian theca cell neoplasm","type":"exact"},{"name":"ovarian theca cell tumor","type":"exact"},{"name":"ovarian theca cell tumour","type":"exact"},{"name":"ovarian thecoma","type":"exact"},{"name":"ovary thecoma","type":"exact"},{"name":"theca cell neoplasm of ovary","type":"exact"},{"name":"theca cell neoplasm of the ovary","type":"exact"},{"name":"theca cell tumor of ovary","type":"exact"},{"name":"theca cell tumor of the ovary","type":"exact"},{"name":"theca cell tumour of ovary","type":"exact"},{"name":"theca cell tumour of the ovary","type":"exact"},{"name":"thecoma of ovary","type":"exact"},{"name":"thecoma of the ovary","type":"exact"}],"termid":"MONDO:0037253","xrefs":{"Monarch":{"xref_id":"0037253"}}}


id: MONDO:0004964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aggressive nodal or extranodal mature (peripheral) T-cell lymphomas that do not belong to the better defined entities of the remainder of mature T-cell lymphomas. This category includes the following variants: lymphoepithelioid cell variant (Lennert's lymphoma), follicular variant, and T-zone variant.","definition_xrefs":["NCIT:C4340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"neoplasm of mature T-cells or NK-cells","termid":"MONDO:0005169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"peripheral T-cell lymphoma, not otherwise specified","secondary_identifiers":["EFO:0000211","NANDO:2200028","icd11.foundation:855224800","ONCOTREE:PTCL"],"synonyms":[{"name":"PTCL","type":"related"},{"name":"peripheral T-cell lymphoma, not otherwise specified","type":"exact"}],"termid":"MONDO:0004964","xrefs":{"Monarch":{"xref_id":"0004964"}}}


id: PBO:0005424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smc5-6 complex non-SMC subunit Nse3","termid":"PBO:0005424"}


id: MONDO:0024229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A miliaria that is characterized by clear, superficial, noninflammed, subcorneal vesicles that easily rupture when rubbed and is located in the stratum corneum.","definition_xrefs":["DOID:0070321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miliaria","termid":"MONDO:0006580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"miliaria crystallina","secondary_identifiers":["icd11.foundation:796835029","MEDGEN:757640","UMLS:C3241961"],"termid":"MONDO:0024229","xrefs":{"Monarch":{"xref_id":"0024229"}}}


id: PBO:0077878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid peroxidase","termid":"PBO:0077878"}


id: MONDO:0022960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatocardioskeletal syndrome boronne type","termid":"MONDO:0022960","xrefs":{"Monarch":{"xref_id":"0022960"}}}


id: PBO:0038502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 11","termid":"PBO:0038502"}


id: GO:0034781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-cyclohexylformamide + OH- = cyclohexylamine + formate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N-cyclohexylformamide amidohydrolase activity (obsolete GO:0034781)","termid":"GO:0034781"}


id: PBO:0082141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of Chs3p (chitin synthase III) during vegetative growth; recruits Chs3p to the bud neck via interaction with Bni4p; SKT5 has a paralog, SHC1, that arose from the whole genome duplication","termid":"PBO:0082141"}


id: GO:0050011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: citramalyl-CoA = itaconyl-CoA + H2O.","definition_xrefs":["MetaCyc:ITACONYL-COA-HYDRATASE-RXN","EC:4.2.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"itaconyl-CoA hydratase activity","secondary_identifiers":["RHEA:13785"],"synonyms":[{"name":"citramalyl-CoA hydro-lyase (itaconyl-CoA-forming)","type":"related"},{"name":"citramalyl-CoA hydro-lyase activity","type":"related"},{"name":"itaconyl coenzyme A hydratase activity","type":"related"}],"termid":"GO:0050011"}


id: GO:0050442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxylate + H2O + pentanoyl-CoA = 3-propylmalate + CoA + H+.","definition_xrefs":["RHEA:14457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"3-propylmalate synthase activity","secondary_identifiers":["MetaCyc:3-PROPYLMALATE-SYNTHASE-RXN","EC:2.3.3.12","KEGG_REACTION:R03040"],"synonyms":[{"name":"3-(n-propyl)-malate synthase activity","type":"related"},{"name":"3-propylmalate glyoxylate-lyase (CoA-pentanoylating) activity","type":"related"},{"name":"N-propylmalate synthase activity","type":"related"},{"name":"beta-n-propylmalate synthase activity","type":"related"},{"name":"pentanoyl-CoA:glyoxylate C-pentanoyltransferase (thioester-hydrolysing, 1-carboxybutyl-forming)","type":"related"}],"termid":"GO:0050442"}


id: GO:0043396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of corticotropin-releasing hormone (CRH), a polypeptide hormone involved in the stress response. CRH is produced by the hypothalamus and stimulates corticotropic cells of the anterior lobe of the pituitary to produce corticotropic hormone (CTH) and other biologically active substances e.g. 2-endorphin, release of CRH is affected by serum levels of cortisol, by stress and by the sleep/wake cycle.","definition_xrefs":["GOC:go_curators","PMID:11027914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"corticotropin-releasing hormone secretion","synonyms":[{"name":"CRF secretion","type":"exact"},{"name":"CRH secretion","type":"exact"},{"name":"corticotropin-releasing factor secretion","type":"exact"}],"termid":"GO:0043396"}


id: MONDO:0013448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"generalized epilepsy with febrile seizures plus","termid":"MONDO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"generalized epilepsy with febrile seizures plus, type 8","secondary_identifiers":["UMLS:C3151191","OMIM:613828","DOID:0111299","MEDGEN:462541","GARD:18664"],"synonyms":[{"name":"GEFSP8","type":"exact"},{"name":"Gefs+, type 8","type":"related"},{"name":"generalized epilepsy with febrile seizures plus, type 8","type":"exact"}],"termid":"MONDO:0013448","xrefs":{"Monarch":{"xref_id":"0013448"}}}


id: PBO:0080198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 6","termid":"PBO:0080198"}


id: MONDO:0017228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 autoimmune pancreatitis is a form of autoimmune pancreatitis (see this term) affecting both sexes and having a younger age of onset (<60 years) and presenting with abdominal pain, steatorrhea and obstructive jaundice.","definition_xrefs":["Orphanet:280315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune pancreatitis","termid":"MONDO:0015175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"autoimmune pancreatitis type 2","secondary_identifiers":["UMLS:C5197785","GARD:21077","MEDGEN:1679984"],"synonyms":[{"name":"AIP type 2","type":"exact"},{"name":"duct-centric pancreatitis","type":"exact"}],"termid":"MONDO:0017228","xrefs":{"Monarch":{"xref_id":"0017228"}}}


id: PBO:0055539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2975","termid":"PBO:0055539"}


id: GO:0004111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + creatine = N-phosphocreatine + ADP + 2 H+.","definition_xrefs":["EC:2.7.3.2","RHEA:17157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"creatine kinase activity","secondary_identifiers":["KEGG_REACTION:R01881","Reactome:R-HSA-200326","Reactome:R-HSA-200318","MetaCyc:CREATINE-KINASE-RXN"],"synonyms":[{"name":"ATP:creatine N-phosphotransferase activity","type":"related"},{"name":"ATP:creatine phosphotransferase activity","type":"related"},{"name":"BB-CK","type":"related"},{"name":"CK","type":"related"},{"name":"CK-BB","type":"related"},{"name":"CK-MB","type":"related"},{"name":"CK-MM","type":"related"},{"name":"CKMiMi","type":"related"},{"name":"MB-CK","type":"related"},{"name":"MM-CK","type":"related"},{"name":"Mi-CK","type":"related"},{"name":"MiMi-CK","type":"related"},{"name":"adenosine triphosphate-creatine transphosphorylase activity","type":"related"},{"name":"creatine phosphokinase activity","type":"related"},{"name":"creatine phosphotransferase activity","type":"related"},{"name":"phosphocreatine kinase activity","type":"related"}],"termid":"GO:0004111"}


id: PBO:0039359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC membrane recruitment protein 1","termid":"PBO:0039359"}


id: GO:0098941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from presynapse to postynapse, across the synaptic cleft, mediated by a trans-synaptic protein complex.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde trans-synaptic signaling","termid":"GO:0098916"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by trans-synaptic complex","termid":"GO:0099545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"anterograde trans-synaptic signaling by trans-synaptic protein complex","termid":"GO:0098941"}


id: PBO:0034505
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nucleosome-dependent_ATPase_activity","termid":"PBO:0034505"}


id: FYPO:0008213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing lactate as the carbon source.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002058"],"is_obsolete":false,"name":"increased vegetative cell population growth on lactate carbon source","termid":"FYPO:0008213"}


id: PBO:0090037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA/mRNA dihydrouridine synthase Dus3","termid":"PBO:0090037"}


id: MONDO:0015865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign tumor of fallopian tubes (obsolete MONDO:0015865)","termid":"MONDO:0015865","xrefs":{"Monarch":{"xref_id":"0015865"}}}


id: PBO:0071939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 16","termid":"PBO:0071939"}


id: PATO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red and blue hues.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Magenta"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magenta","termid":"PATO:0000321"}


id: PBO:0043068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRM3 antisense RNA 1","termid":"PBO:0043068"}


id: GO:0030494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a bacteriochlorophyll, any of the chlorophylls of photosynthetic bacteria. They differ structurally from the chlorophylls of higher plants.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"},{"relation_name":"is_a","term_name":"bacteriochlorophyll metabolic process","termid":"GO:0030493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"bacteriochlorophyll biosynthetic process","synonyms":[{"name":"bacteriochlorophyll anabolism","type":"exact"},{"name":"bacteriochlorophyll biosynthesis","type":"exact"},{"name":"bacteriochlorophyll formation","type":"exact"},{"name":"bacteriochlorophyll synthesis","type":"exact"}],"termid":"GO:0030494"}


id: PBO:0058291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4666a","termid":"PBO:0058291"}


id: PBO:0067349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 446, pseudogene","termid":"PBO:0067349"}


id: GO:0047666
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + NH4 = ADP + 3 H+ + phosphoramidate.","definition_xrefs":["EC:2.7.3.8","RHEA:11024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"ammonia kinase activity","secondary_identifiers":["KEGG_REACTION:R00141","MetaCyc:AMMONIA-KINASE-RXN"],"synonyms":[{"name":"ATP:ammonia phosphotransferase activity","type":"related"},{"name":"phosphoramidate-ADP-phosphotransferase activity","type":"related"},{"name":"phosphoramidate-adenosine diphosphate phosphotransferase activity","type":"related"}],"termid":"GO:0047666"}


id: GO:0045590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of differentiation of regulatory T cells.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"is_a","term_name":"regulation of regulatory T cell differentiation","termid":"GO:0045589"},{"relation_name":"negatively_regulates","term_name":"regulatory T cell differentiation","termid":"GO:0045066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of regulatory T cell differentiation","synonyms":[{"name":"down regulation of regulatory T cell differentiation","type":"exact"},{"name":"down-regulation of regulatory T cell differentiation","type":"exact"},{"name":"downregulation of regulatory T cell differentiation","type":"exact"},{"name":"inhibition of regulatory T cell differentiation","type":"narrow"},{"name":"negative regulation of regulatory T cell development","type":"related"},{"name":"negative regulation of regulatory T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of regulatory T-cell differentiation","type":"exact"},{"name":"negative regulation of regulatory T-lymphocyte differentiation","type":"exact"},{"name":"negative regulation of suppressor T cell differentiation","type":"exact"},{"name":"negative regulation of suppressor T-cell differentiation","type":"exact"}],"termid":"GO:0045590"}


id: GO:0003218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a left cardiac ventricle from unspecified parts.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac ventricle formation","termid":"GO:0003211"},{"relation_name":"part_of","term_name":"cardiac left ventricle morphogenesis","termid":"GO:0003214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac left ventricle formation","termid":"GO:0003218"}


id: MONDO:0024503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with neuroendocrine differentiation arising from the digestive system. It includes neuroendocrine tumors (well-differentiated endocrine tumors or carcinoid tumors and well differentiated endocrine carcinomas) and neuroendocrine carcinomas (poorly differentiated neuroendocrine carcinomas, small cell carcinomas, and large cell neuroendocrine carcinomas).","definition_xrefs":["NCIT:C27721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"digestive system neuroendocrine neoplasm","secondary_identifiers":["MEDGEN:232237","UMLS:C1333799","GARD:2437","MESH:C535650","Orphanet:100092"],"synonyms":[{"name":"GEP tumors","type":"related"},{"name":"GEP tumours","type":"related"},{"name":"GEP-NEN","type":"related"},{"name":"GEP-NET","type":"related"},{"name":"alimentary part of gastrointestinal system NET","type":"exact"},{"name":"alimentary part of gastrointestinal system neuroendocrine neoplasm","type":"exact"},{"name":"alimentary part of gastrointestinal system neuroendocrine tumor","type":"exact"},{"name":"alimentary part of gastrointestinal system neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"alimentary part of gastrointestinal system neuroendocrine tumour","type":"exact"},{"name":"carcinoid tumor","type":"related"},{"name":"carcinoid tumor of digestive system","type":"exact"},{"name":"carcinoid tumour","type":"related"},{"name":"carcinoid tumour of digestive system","type":"exact"},{"name":"digestive system NET","type":"exact"},{"name":"digestive system neuroendocrine neoplasm","type":"exact"},{"name":"digestive system neuroendocrine tumor","type":"exact"},{"name":"digestive system neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"digestive system neuroendocrine tumour","type":"exact"},{"name":"gastro-enteropancreatic neuroendocrine tumor","type":"exact"},{"name":"gastro-enteropancreatic neuroendocrine tumour","type":"exact"},{"name":"gastroenteropancreatic endocrine tumor","type":"exact"},{"name":"gastroenteropancreatic endocrine tumour","type":"exact"},{"name":"gastroenteropancreatic neuroendocrine neoplasm","type":"exact"},{"name":"gastrointestinal neuroendocrine neoplasm","type":"exact"},{"name":"gastrointestinal system neuroendocrine neoplasm","type":"exact"},{"name":"neuroendocrine neoplasm of alimentary part of gastrointestinal system","type":"exact"},{"name":"neuroendocrine neoplasm of digestive system","type":"exact"}],"termid":"MONDO:0024503","xrefs":{"Monarch":{"xref_id":"0024503"}}}


id: MONDO:0700246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any eye disorder in which the cause of the disease is a variant in the PAX6 gene itself or a variant within another locus that results in defective regulation of the PAX6 gene.","definition_xrefs":["PMID:17679951","PMID:24290376","PMID:26394807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ocular dysgenesis caused by defects in PAX6 regulation","termid":"MONDO:0700246","xrefs":{"Monarch":{"xref_id":"0700246"}}}


id: PR:Q9UTP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11H11.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTP4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smr domain-containing protein C11H11.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11H11.03c","synonyms":[{"name":"Spom972h-SPAC11H11.03c","type":"exact"}],"termid":"PR:Q9UTP4"}


id: PR:Q9C0Y2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB2C8.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0Y2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein PB2C8.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2C8.01","synonyms":[{"name":"Spom972h-SPAPB2C8.01","type":"exact"}],"termid":"PR:Q9C0Y2"}


id: GO:0031503
data:
  {"annotated_genes":["SJAG_02250","SJAG_04308","SJAG_03540","SJAG_01339","SJAG_05196","SJAG_03719","SJAG_03882","SJAG_01338","SJAG_04148","SJAG_01449","SJAG_03593","SJAG_03126","SJAG_03012","SJAG_01013","SJAG_02210","SJAG_02814","SJAG_03729","SJAG_00727","SJAG_01065","SJAG_02299","SJAG_01745","SJAG_00471","SJAG_03299","SJAG_01805","SJAG_02624","SJAG_02737","SJAG_00753","SJAG_02274","SJAG_01613","SJAG_04076","SJAG_01391","SJAG_02757","SJAG_00794","SJAG_03683","SJAG_02761","SJAG_01358","SJAG_00178","SJAG_04940","SJAG_04721","SJAG_04379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098653"},{"annotations":[91669,103160,110334,117333,89917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072766"},{"annotations":[116312,95647,94126,102776,118549,109510,100719,99554,119064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"},{"annotations":[76518,106105,116615,80501,118068,76987,99973,77276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000055"},{"annotations":[80502,76519,70769,70263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000056"},{"annotations":[104285,89333,100751,110802,95318,96458,94318,79611,101737,106524,71944,105741,111820,76848,92051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000054"}]},"cv_name":"biological_process","definition":"A localization process that acts on a protein complex; the complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization","termid":"GO:0051179"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00178":null,"SJAG_00471":null,"SJAG_00727":null,"SJAG_00753":null,"SJAG_00794":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01338":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01391":null,"SJAG_01449":null,"SJAG_01613":null,"SJAG_01745":null,"SJAG_01805":null,"SJAG_02210":null,"SJAG_02250":null,"SJAG_02274":null,"SJAG_02299":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02757":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03012":null,"SJAG_03126":null,"SJAG_03299":null,"SJAG_03540":null,"SJAG_03593":null,"SJAG_03683":null,"SJAG_03719":null,"SJAG_03729":null,"SJAG_03882":null,"SJAG_04076":null,"SJAG_04148":null,"SJAG_04308":null,"SJAG_04379":null,"SJAG_04721":null,"SJAG_04940":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein-containing complex localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0034629"],"synonyms":[{"name":"cellular protein complex localisation","type":"related"},{"name":"cellular protein complex localization","type":"related"},{"name":"cellular protein-containing complex localization","type":"related"},{"name":"establishment and maintenance of cellular protein complex localization","type":"related"},{"name":"establishment and maintenance of protein complex localization","type":"exact"},{"name":"protein complex localisation","type":"exact"},{"name":"protein complex localization","type":"related"}],"termid":"GO:0031503","terms_by_termid":{"GO:0000054":null,"GO:0000055":null,"GO:0000056":null,"GO:0072766":null,"GO:0098653":null,"GO:1990571":null}}


id: GO:0034206
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex formed by the association of a distinct set of general and specific transcription factors with a region of enhancer DNA. The cooperative assembly of an enhanceosome confers specificity of transcriptional regulation.","definition_xrefs":["PMID:11250145","PMID:17574024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"enhanceosome","secondary_identifiers":["Wikipedia:Enhanceosome"],"termid":"GO:0034206"}


id: GO:0036339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a lymphocyte to an endothelial cell of a high endothelial venule (HEV) via adhesion molecules. A HEV cell is an endothelial cell that is cuboidal, expresses leukocyte-specific receptors, and allows for passage of lymphocytes into bloodstream.","definition_xrefs":["PMID:7679710","CL:0000542","Wikipedia:High_endothelial_venules","CL:0002652","GOC:nhn","PMID:19339990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"lymphocyte adhesion to endothelial cell of high endothelial venule","synonyms":[{"name":"lymphocyte adhesion to HEV cell","type":"exact"},{"name":"lymphocyte adhesion to high endothelial venule","type":"exact"}],"termid":"GO:0036339"}


id: PBO:0000097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase (predicted)","termid":"PBO:0000097"}


id: GO:0016210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + 4-coumaroyl-CoA = 4 CoA + naringenin chalcone + 3 CO2.","definition_xrefs":["EC:2.3.1.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"naringenin-chalcone synthase activity","secondary_identifiers":["MetaCyc:NARINGENIN-CHALCONE-SYNTHASE-RXN","RHEA:11128"],"synonyms":[{"name":"DOCS","type":"narrow"},{"name":"malonyl-CoA:4-coumaroyl-CoA malonyltransferase (cyclizing)","type":"broad"}],"termid":"GO:0016210"}


id: PBO:0070080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 37, pseudogene","termid":"PBO:0070080"}


id: PBO:0063230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin related 15","termid":"PBO:0063230"}


id: PATO:0001780
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in a bearer by virtue of the bearer's being abnormally developed, usually due to malnutrition.","definition_xrefs":["Wiikipedia:Wiikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophic","synonyms":[{"name":"dystrophied","type":"exact"},{"name":"dystrophy","type":"related"}],"termid":"PATO:0001780"}


id: MONDO:0011324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypospadias, hypertelorism, upper 51D coloboma, and mixed-type hearing loss (obsolete MONDO:0011324)","termid":"MONDO:0011324","xrefs":{"Monarch":{"xref_id":"0011324"}}}


id: PBO:0044322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 2","termid":"PBO:0044322"}


id: PBO:0059997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 17","termid":"PBO:0059997"}


id: PR:000027608
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of replication checkpoint protein 1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:14585996","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediator of replication checkpoint protein 1","termid":"PR:000027605"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of replication checkpoint protein 1 unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC694.06c","synonyms":[{"name":"Spom-mrc1/UnMod","type":"exact"}],"termid":"PR:000027608"}


id: GO:1905230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a borneol stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:26593909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to borneol","termid":"GO:1905230"}


id: GO:0051972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of telomerase activity, the catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). Telomerases catalyze extension of the 3'- end of a DNA strand by one deoxynucleotide at a time using an internal RNA template that encodes the telomeric repeat sequence.","definition_xrefs":["EC:2.-.-.-","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of telomerase activity (obsolete GO:0051972)","synonyms":[{"name":"telomerase regulator","type":"exact"}],"termid":"GO:0051972"}


id: FYPO:0002914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal in intergenic regions. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"increased intergenic transcription","synonyms":[{"name":"increased intergenic transcription during mitotic cell cycle","type":"related"},{"name":"increased transcription at intergenic regions during vegetative growth","type":"exact"},{"name":"increased transcription from intergenic regions","type":"exact"},{"name":"increased transcription from intergenic regions during vegetative growth","type":"exact"}],"termid":"FYPO:0002914"}


id: FYPO:0007310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 12 of histone H4 in centromere outer repeat regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K12 acetylation at centromere during vegetative growth","termid":"FYPO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"increased histone H4-K12 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K12 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"increased histone H4-K12 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"increased histone H4-K12 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"increased histone H4K12 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0007310"}


id: PBO:0084107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Haze-protective mannoprotein; reduces particle size of aggregated proteins in white wines, thereby decreasing turbidity; intragenic repeat expansion controls chronological aging; expansion of intragenic tandem repeats within N-terminus sufficient to cause pronounced life span shortening; repeat expansion shifts cells from sedentary to buoyant, thereby increasing exposure to oxygen, altering methionine, lipid, and purine metabolism","termid":"PBO:0084107"}


id: MONDO:1012402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"caprine-like generalized hypoplasia syndrome, non-human animal","termid":"MONDO:1011683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caprine-like generalized hypoplasia syndrome, cattle","secondary_identifiers":["OMIA:001502-9913"],"termid":"MONDO:1012402","xrefs":{"Monarch":{"xref_id":"1012402"}}}


id: GO:1904929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any coreceptor activity that is involved in Wnt signaling pathway, planar cell polarity pathway.","definition_xrefs":["GO_REF:0000061","GOC:bf","GOC:TermGenie","PMID:24431302","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete coreceptor activity involved in Wnt signaling pathway, planar cell polarity pathway (obsolete GO:1904929)","synonyms":[{"name":"Wnt co-receptor activity, non-canonical signaling","type":"broad"},{"name":"Wnt co-receptor, non-canonical pathway","type":"broad"},{"name":"Wnt/PCP co-receptor activity","type":"exact"},{"name":"coreceptor activity involved in PCP pathway","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signalling pathway, planar cell polarity pathway","type":"exact"},{"name":"coreceptor activity involved in Wnt-JNK signaling pathway","type":"related"},{"name":"coreceptor activity involved in Wnt-PCP signaling pathway","type":"related"},{"name":"coreceptor activity involved in Wnt-activated signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"coreceptor activity involved in non-canonical Wnt signaling pathway","type":"related"},{"name":"coreceptor activity involved in planar cell polarity pathway","type":"exact"},{"name":"coreceptor, insoluble ligand activity involved in PCP pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signalling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt-JNK signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt-PCP signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt-activated signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in non-canonical Wnt signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in planar cell polarity pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in PCP pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signalling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt-JNK signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt-PCP signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt-activated signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in non-canonical Wnt signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in planar cell polarity pathway","type":"related"}],"termid":"GO:1904929"}


id: GO:0034370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a triglyceride-rich lipoprotein particle, including the hydrolysis of triglyceride by lipoprotein lipase, with the subsequent loss of free fatty acid, and the transfer of cholesterol esters to a triglyceride-rich lipoprotein particle by cholesteryl ester transfer protein (CETP), with the simultaneous transfer of triglyceride from a triglyceride-rich lipoprotein particle.","definition_xrefs":["GOC:rl","GOC:expert_pt","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle remodeling","termid":"GO:0034369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"triglyceride-rich lipoprotein particle remodeling","synonyms":[{"name":"triacylglycerol-rich lipoprotein particle remodeling","type":"exact"},{"name":"triacylglycerol-rich lipoprotein particle remodelling","type":"exact"},{"name":"triglyceride-rich lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0034370"}


id: GO:0006477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a sulfate group as an ester to a protein amino acid.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"is_a","term_name":"sulfation","termid":"GO:0051923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"protein sulfation","synonyms":[{"name":"protein amino acid sulfation","type":"exact"},{"name":"protein amino acid sulphation","type":"exact"}],"termid":"GO:0006477"}


id: PBO:0039200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member B1 pseudogene 3","termid":"PBO:0039200"}


id: PR:O59823
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase subunit D that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11671:SF0","PRO:DNx","OMA:SCHPO05013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit D (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.03","secondary_identifiers":["UniProtKB:O59823"],"synonyms":[{"name":"Spom972h-ATP6V1D","type":"exact"},{"name":"V-ATPase subunit D (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit D (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59823"}


id: PBO:0081043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing, antiviral 1 like","termid":"PBO:0081043"}


id: PBO:0051554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 9 receptor pseudogene 4","termid":"PBO:0051554"}


id: GO:2001208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription elongation mediated by RNA polymerase I.","definition_xrefs":["PMID:20299458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transcription by RNA polymerase I","termid":"GO:0016479"},{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription, elongation","termid":"GO:0032785"},{"relation_name":"is_a","term_name":"regulation of transcription elongation by RNA polymerase I","termid":"GO:2001207"},{"relation_name":"negatively_regulates","term_name":"transcription elongation by RNA polymerase I","termid":"GO:0006362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"negative regulation of transcription elongation by RNA polymerase I","synonyms":[{"name":"negative regulation of RNA elongation from Pol I promoter","type":"exact"},{"name":"negative regulation of transcription elongation from RNA polymerase I promoter","type":"exact"}],"termid":"GO:2001208"}


id: PBO:0029601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transporter_activity","termid":"PBO:0029601"}


id: PBO:0070768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L11 pseudogene 4","termid":"PBO:0070768"}


id: PBO:0068798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 35, pseudogene","termid":"PBO:0068798"}


id: SO:0002042
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a Y-RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_RNA_primary_transcript","synonyms":[{"name":"Y-RNA primary transcript","type":"exact"}],"termid":"SO:0002042"}


id: PBO:0111059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptide methyltransferase, human CARNMT1 ortholog, implicated in amino acid metabolism","termid":"PBO:0111059"}


id: GO:0061719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucose into pyruvate, with the concomitant production of a small amount of ATP and the utilization of ADP in the initial kinase reactions.","definition_xrefs":["MetaCyc:P341-PWY","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"is_a","term_name":"glucose catabolic process to pyruvate","termid":"GO:0061718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281","GO:0006091"],"is_obsolete":false,"name":"glucose catabolic process to pyruvate utilizing ADP","termid":"GO:0061719"}


id: PBO:0081689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 610","termid":"PBO:0081689"}


id: GO:0030565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Activity that provides specificity to a pseudouridine synthetase by using base complementarity to guide site-specific pseudouridylations to a small nuclear RNA molecule.","definition_xrefs":["PMID:11733745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA pseudouridylation guide activity","termid":"GO:0030558"},{"relation_name":"is_a","term_name":"snRNA modification guide activity","termid":"GO:0030566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"snRNA pseudouridylation guide activity","termid":"GO:0030565"}


id: PBO:0056113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase like 1","termid":"PBO:0056113"}


id: GO:0032928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of enzymatic generation of superoxide by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of superoxide metabolic process","termid":"GO:0090322"},{"relation_name":"regulates","term_name":"superoxide anion generation","termid":"GO:0042554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of superoxide anion generation","synonyms":[{"name":"regulation of superoxide release","type":"exact"}],"termid":"GO:0032928"}


id: PATO:0002115
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in a bearer by virtue of the bearer's containing fibrin.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinoid","termid":"PATO:0002115"}


id: GO:0003389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a neuronal projection over time by the attachment of a part of the cell to an anchor and the subsequent migration of the cell body away from the anchor point.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retrograde extension","termid":"GO:0003389"}


id: GO:0061611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways in which mannose, the aldohexose manno-hexose, is converted to fructose-6-phosphate.","definition_xrefs":["ISBN:0879010479","ISBN:0201090910","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose 6-phosphate metabolic process","termid":"GO:0006002"},{"relation_name":"is_a","term_name":"mannose catabolic process","termid":"GO:0019309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"mannose to fructose-6-phosphate catabolic process","synonyms":[{"name":"mannose metabolism to fructose-6-phosphate","type":"exact"}],"termid":"GO:0061611"}


id: PBO:0027847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_lemon-shaped_cell","termid":"PBO:0027847"}


id: GO:0047069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydroxykynurenate + O2 = 5-(3-carboxylato-3-oxoprop-1-en-1-yl)-4,6-dihydroxypyridine-2-carboxylate + H+.","definition_xrefs":["EC:1.13.11.10","RHEA:23400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"7,8-dihydroxykynurenate 8,8a-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R03253","MetaCyc:1.13.11.10-RXN"],"synonyms":[{"name":"7,8-dihydroxykynurenate 8,8alpha-dioxygenase activity","type":"related"},{"name":"7,8-dihydroxykynurenate oxygenase activity","type":"related"},{"name":"7,8-dihydroxykynurenate:oxygen 8,8a-oxidoreductase (decyclizing)","type":"related"},{"name":"7,8-dihydroxykynurenate:oxygen 8,8alpha-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047069"}


id: GO:0016231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-glucosamine residues in N-acetyl-beta-D-glucosaminides.","definition_xrefs":["PMID:29143882","PMID:37590576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-N-acetylhexosaminidase activity","termid":"GO:0004563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"beta-N-acetylglucosaminidase activity","termid":"GO:0016231"}


id: MOD:00940
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with 3-methyl-2-pyridyl isocyanate.","definition_xrefs":["PubMed:11078590","Unimod:501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isocyanate reagent derivatized residue","termid":"MOD:00840"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-2-pyridyl isocyanate derivatized residue","synonyms":[{"name":"3-methyl-2-pyridyl isocyanate","type":"related"},{"name":"PyMIC","type":"related"}],"termid":"MOD:00940"}


id: PBO:0030680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_spore","termid":"PBO:0030680"}


id: PBO:0109124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 475","termid":"PBO:0109124"}


id: PBO:0082966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein required for replication of Brome mosaic virus; S. cerevisiae is a model system for studying positive-strand RNA virus replication; null mutation confers sensitivity to tunicamycin and DTT","termid":"PBO:0082966"}


id: GO:1903675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cap-dependent translational initiation.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cap-dependent translational initiation","termid":"GO:1903674"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translational initiation","termid":"GO:1904689"},{"relation_name":"negatively_regulates","term_name":"cap-dependent translational initiation","termid":"GO:0002191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0002181","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cap-dependent translational initiation","synonyms":[{"name":"down regulation of cap-dependent translational initiation","type":"exact"},{"name":"down-regulation of cap-dependent translational initiation","type":"exact"},{"name":"downregulation of cap-dependent translational initiation","type":"exact"},{"name":"inhibition of cap-dependent translational initiation","type":"narrow"}],"termid":"GO:1903675"}


id: MONDO:1011711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder, non-human animal","termid":"MONDO:1011301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unilateral deafness and vestibular dysfunction, non-human animal","secondary_identifiers":["OMIA:002196"],"termid":"MONDO:1011711","xrefs":{"Monarch":{"xref_id":"1011711"}}}


id: MONDO:1010627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chediak-Higashi syndrome that occurs in American mink.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Chediak-Higashi syndrome, non-human animal","termid":"MONDO:1010070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chediak-Higashi syndrome, American mink","secondary_identifiers":["OMIA:000185-452646"],"termid":"MONDO:1010627","xrefs":{"Monarch":{"xref_id":"1010627"}}}


id: GO:0140718
data:
  {"annotated_genes":["SJAG_00769","SJAG_02723","SJAG_03255","SJAG_04039","SJAG_04574","SJAG_01331","SJAG_03982","SJAG_03844","SJAG_01867","SJAG_02622","SJAG_02401","SJAG_01075","SJAG_03997","SJAG_02778","SJAG_00934","SJAG_01579","SJAG_01599","SJAG_03664","SJAG_04768","SJAG_02382","SJAG_03624","SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94408,103565],"is_not":false,"summary":null,"term":"GO:0140718"},{"annotations":[77621,107017],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0061188"},{"annotations":[113679,72570,92402,71206,104434,108527,112488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000183"},{"annotations":[100641,118520,118148,92194,97517],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902801"},{"annotations":[116926,110859,87818,91122,112490,104536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902794"},{"annotations":[106672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902795"}]},"cv_name":"biological_process","definition":"The compaction of chromatin into a conformation that is refractory to transcription but that can be converted to euchromatin and allow transcription in specific contexts. These can be temporal (e.g., developmental states or specific cell-cycle stages), spatial (e.g., nuclear localization changes from the center to the periphery or vice versa due to exogenous factors/signals), or parental/heritable (e.g., monoallelic gene expression). In metazoa, this involves the methylation of histone H3K27.","definition_xrefs":["PMID:17936700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_00934":null,"SJAG_01075":null,"SJAG_01331":null,"SJAG_01579":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02382":null,"SJAG_02401":null,"SJAG_02622":null,"SJAG_02723":null,"SJAG_02778":null,"SJAG_03255":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_03844":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04574":null,"SJAG_04768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"facultative heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fHC assembly","type":"exact"},{"name":"facultative heterochromatin assembly","type":"exact"}],"termid":"GO:0140718","terms_by_termid":{"GO:0000183":null,"GO:0061188":null,"GO:0140718":null,"GO:1902794":null,"GO:1902795":null,"GO:1902801":null}}


id: GO:0035109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of limbs that are derived from an imaginal disc are generated and organized. A limb is an appendage of an animal used for locomotion or grasping. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete imaginal disc-derived limb morphogenesis (obsolete GO:0035109)","synonyms":[{"name":"imaginal disc-derived limb morphogenesis","type":"exact"}],"termid":"GO:0035109"}


id: PR:O94293
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC887.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C887.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.08","synonyms":[{"name":"Spom972h-SPBC887.08","type":"exact"}],"termid":"PR:O94293"}


id: PBO:0040542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-glucuronyltransferase 1","termid":"PBO:0040542"}


id: PBO:0089573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Nop56","termid":"PBO:0089573"}


id: PBO:0043246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 6","termid":"PBO:0043246"}


id: PBO:0045643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 1","termid":"PBO:0045643"}


id: GO:0016700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which hydrogen is the electron donor and reduces an acceptor other than a cytochrome, an iron-sulfur protein, NAD, NADP or a quinone or similar compound.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on hydrogen as donor, other acceptors (obsolete GO:0016700)","synonyms":[{"name":"oxidoreductase activity, acting on hydrogen as donor, other acceptors","type":"exact"}],"termid":"GO:0016700"}


id: GO:0051248
data:
  {"annotated_genes":["SJAG_00169","SJAG_00475","SJAG_02638","SJAG_04291","SJAG_03048","SJAG_03869","SJAG_00423","SJAG_01942","SJAG_00786","SJAG_03501","SJAG_02026","SJAG_01528","SJAG_02244","SJAG_02592","SJAG_05000","SJAG_00690","SJAG_00052"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[115239,118631,95924,99773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000766"},{"annotations":[91636,112534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904689"},{"annotations":[99667,94698,110042,70344,75586,116005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[78407,77758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"},{"annotations":[107314,77654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[75721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001125"},{"annotations":[99781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141014"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of chemical reactions and pathways involving a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"negatively_regulates","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00169":null,"SJAG_00423":null,"SJAG_00475":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01528":null,"SJAG_01942":null,"SJAG_02026":null,"SJAG_02244":null,"SJAG_02592":null,"SJAG_02638":null,"SJAG_03048":null,"SJAG_03501":null,"SJAG_03869":null,"SJAG_04291":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0032269"],"synonyms":[{"name":"down regulation of cellular protein metabolic process","type":"exact"},{"name":"down regulation of protein metabolic process","type":"exact"},{"name":"down-regulation of cellular protein metabolic process","type":"exact"},{"name":"down-regulation of protein metabolic process","type":"exact"},{"name":"downregulation of cellular protein metabolic process","type":"exact"},{"name":"downregulation of protein metabolic process","type":"exact"},{"name":"inhibition of cellular protein metabolic process","type":"narrow"},{"name":"inhibition of protein metabolic process","type":"narrow"},{"name":"negative regulation of cellular protein metabolic process","type":"exact"},{"name":"negative regulation of cellular protein metabolism","type":"exact"},{"name":"negative regulation of protein metabolism","type":"exact"}],"termid":"GO:0051248","terms_by_termid":{"GO:0032435":null,"GO:0141014":null,"GO:1904293":null,"GO:1904689":null,"GO:1905785":null,"GO:1990625":null,"GO:2000766":null,"GO:2001125":null}}


id: MONDO:0850099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"MIR140-related spondyloepiphyseal dysplasia","secondary_identifiers":["MEDGEN:1842455","Orphanet:623695","UMLS:C5680411","GARD:22495"],"termid":"MONDO:0850099","xrefs":{"Monarch":{"xref_id":"0850099"}}}


id: MONDO:1011111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptorchidism that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptorchidism, non-human animal","termid":"MONDO:1010275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism, horse","secondary_identifiers":["OMIA:000243-9796"],"termid":"MONDO:1011111","xrefs":{"Monarch":{"xref_id":"1011111"}}}


id: MONDO:0003696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete meningeal melanocytoma (obsolete MONDO:0003696)","termid":"MONDO:0003696","xrefs":{"Monarch":{"xref_id":"0003696"}}}


id: PATO:0001314
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of the bearer's having or exhibiting variation of temperature.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability of temperature","termid":"PATO:0001304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant temperature","termid":"PATO:0001314"}


id: PBO:0018018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine kinase Thr1 (predicted)","termid":"PBO:0018018"}


id: PBO:0004979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"28S ribosomal RNA","termid":"PBO:0004979"}


id: MONDO:1011836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar cortical atrophy, non-human animal","secondary_identifiers":["OMIA:000177"],"termid":"MONDO:1011836","xrefs":{"Monarch":{"xref_id":"1011836"}}}


id: PBO:0050923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFITM3P pseudogene 6","termid":"PBO:0050923"}


id: GO:0044069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a symbiont organism modulates the anion transport, the directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, of its host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host anion transport (obsolete GO:0044069)","synonyms":[{"name":"modification of host anion transport by symbiont","type":"exact"}],"termid":"GO:0044069"}


id: MONDO:0023137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feigenbaum Bergeron syndrome","termid":"MONDO:0023137","xrefs":{"Monarch":{"xref_id":"0023137"}}}


id: PBO:0047344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphatase 2","termid":"PBO:0047344"}


id: GO:0032694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-11 production.","definition_xrefs":["GOC:mah","PMID:29286137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-11 production","termid":"GO:0032654"},{"relation_name":"negatively_regulates","term_name":"interleukin-11 production","termid":"GO:0032614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-11 production","secondary_identifiers":["GO:0045364","GO:0150170"],"synonyms":[{"name":"down regulation of interleukin-11 production","type":"exact"},{"name":"down-regulation of interleukin-11 production","type":"exact"},{"name":"downregulation of interleukin-11 production","type":"exact"},{"name":"inhibition of interleukin-11 production","type":"narrow"},{"name":"negative regulation of IL-11 production","type":"exact"},{"name":"negative regulation of interleukin-11 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-11 secretion","type":"narrow"}],"termid":"GO:0032694"}


id: MONDO:0004609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of acute infections caused by herpes simplex virus type 1 or type 2 that is characterized by the development of one or more small fluid-filled vesicles with a raised erythematous base on the skin or mucous membrane. It occurs as a primary infection or recurs due to a reactivation of a latent infection. (Dorland, 27th ed.)","definition_xrefs":["MESH:D006561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Herpesviridae infectious disease","termid":"MONDO:0005794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herpes simplex infectious disease","secondary_identifiers":["ICD9:054","ICD10CM:B00","EFO:1002022","MEDGEN:9234","ICD9:058.89","SCTID:88594005","DOID:8566","UMLS:C0019348"],"synonyms":[{"name":"Herpesvirus hominis disease","type":"exact"},{"name":"Simplexvirus caused disease or disorder","type":"exact"},{"name":"Simplexvirus disease or disorder","type":"exact"},{"name":"Simplexvirus infectious disease","type":"exact"},{"name":"herpes simplex","type":"related"},{"name":"herpes simplex complex","type":"related"},{"name":"herpes simplex infection","type":"related"},{"name":"herpes simplex viral infection","type":"related"}],"termid":"MONDO:0004609","xrefs":{"Monarch":{"xref_id":"0004609"}}}


id: PBO:0078778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 3-2","termid":"PBO:0078778"}


id: MONDO:1011476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis multiplex congenita that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita, non-human animal","termid":"MONDO:1011455"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita, sheep","secondary_identifiers":["OMIA:001465-9940"],"termid":"MONDO:1011476","xrefs":{"Monarch":{"xref_id":"1011476"}}}


id: _global:enabled_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of enables","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"has_participant","termid":"_global:has_participant"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enabled_by","secondary_identifiers":["RO:0002333"],"termid":"_global:enabled_by"}


id: GO:1903596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gap junction assembly.","definition_xrefs":["GO_REF:0000058","GOC:rl","GOC:TermGenie","GOC:BHF","PMID:25017399","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell junction assembly","termid":"GO:1901888"},{"relation_name":"regulates","term_name":"gap junction assembly","termid":"GO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of gap junction assembly","termid":"GO:1903596"}


id: GO:0008648
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A family of hormones that stimulate secretion of saliva and cause smooth muscle contraction and vasodilation.","definition_xrefs":["ISBN:0721662544","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete tachykinin (obsolete GO:0008648)","synonyms":[{"name":"tachykinin","type":"exact"}],"termid":"GO:0008648"}


id: GO:0071558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a tri- or a dimethyl-lysine residue at position 27 of the histone H3 protein. This is a dioxygenase reaction that is dependent on Fe(II) and 2-oxoglutarate.","definition_xrefs":["GOC:sp","PMID:20622853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"histone H3 demethylase activity","termid":"GO:0141052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0032452"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0032452","GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histone H3K27me2/H3K27me3 demethylase activity","secondary_identifiers":["Reactome:R-HSA-9822985","RHEA:60224","Reactome:R-HSA-9822914","Reactome:R-HSA-3222593","Reactome:R-HSA-5617431","EC:1.14.11.68","Reactome:R-HSA-5617887"],"synonyms":[{"name":"histone H3-tri/di-methyl-lysine-27 demethylase activity","type":"exact"},{"name":"histone H3K27me2 demethylase activity","type":"related"},{"name":"histone H3K27me3 demethylase activity","type":"related"},{"name":"histone demethylase activity (H3-K27 specific)","type":"broad"}],"termid":"GO:0071558"}


id: PBO:0042070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 138","termid":"PBO:0042070"}


id: GO:0045098
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of intermediate filament, typically made up of one or more of the proteins vimentin, desmin, glial fibrillary acidic protein (GFAP), and peripherin. Unlike the keratins, the type III proteins can form both homo- and heteropolymeric IF filaments.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament","termid":"GO:0005882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type III intermediate filament","synonyms":[{"name":"desmin","type":"narrow"},{"name":"glial fibrillary acidic protein","type":"narrow"},{"name":"peripherin","type":"narrow"},{"name":"type III intermediate filament associated protein","type":"narrow"},{"name":"vimentin","type":"narrow"}],"termid":"GO:0045098"}


id: MONDO:0850231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A panniculitis that is characterized by sudden onset of painful, erythematous, subcutaneous nodules mainly localized to the pretibial areas. Lesions are usually bilateral and symmetrical, ranging from 1 to 5 cm in diameter.","definition_xrefs":["DOID:0080750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"panniculitis","termid":"MONDO:0006591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythema nodosum","secondary_identifiers":["icd11.foundation:1628519266","MEDGEN:41858","UMLS:C0014743"],"termid":"MONDO:0850231","xrefs":{"Monarch":{"xref_id":"0850231"}}}


id: MONDO:0014287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy that has material basis in homozygous or compound heterozygous mutation in the WDR34 gene on chromosome 9q34.","definition_xrefs":["DOID:0110095","PMID:24183449"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"asphyxiating thoracic dystrophy 3","termid":"MONDO:0013127"},{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 11 with or without polydactyly","secondary_identifiers":["MEDGEN:816530","GARD:15996","OMIM:615633","UMLS:C3810200"],"synonyms":[{"name":"SRTD11","type":"exact"},{"name":"short-rib thoracic dysplasia 11 with or without polydactyly","type":"exact"}],"termid":"MONDO:0014287","xrefs":{"Monarch":{"xref_id":"0014287"}}}


id: GO:0014847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the proximal stomach. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The proximal stomach, composed of the fundus and upper body, shows low frequency, sustained tonic contractions that are responsible for generating a basal pressure within the stomach.","definition_xrefs":["PMID:30252381","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonic smooth muscle contraction","termid":"GO:0014820"},{"relation_name":"is_a","term_name":"stomach smooth muscle contraction","termid":"GO:0120063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal stomach smooth muscle contraction","termid":"GO:0014847"}


id: GO:0102633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: flaviolin-2-olate + NADH + H+ + O2 = mompain + NAD + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete flaviolin monooxygenase activity (obsolete GO:0102633)","termid":"GO:0102633"}


id: MONDO:0005401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the colon. Representative examples of benign neoplasms include lipoma and leiomyoma. Representative examples of malignant neoplasms include carcinoma, lymphoma, and sarcoma. Colonic adenomas always exhibit epithelial dysplasia and are considered premalignant neoplasms.","definition_xrefs":["NCIT:C2953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic disorder","termid":"MONDO:0003409"},{"relation_name":"is_a","term_name":"colorectal neoplasm","termid":"MONDO:0005335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colonic neoplasm","secondary_identifiers":["EFO:0004288","MESH:D003110","MEDGEN:3165","UMLS:C0009375"],"synonyms":[{"name":"colon neoplasm","type":"exact"},{"name":"colon neoplasm (disease)","type":"exact"},{"name":"colon tumor","type":"exact"},{"name":"colon tumour","type":"exact"},{"name":"colonic neoplasm","type":"exact"},{"name":"colonic tumor","type":"exact"},{"name":"colonic tumour","type":"exact"},{"name":"neoplasm of colon","type":"exact"},{"name":"neoplasm of the colon","type":"exact"},{"name":"tumor of colon","type":"exact"},{"name":"tumor of the colon","type":"exact"},{"name":"tumour of colon","type":"exact"},{"name":"tumour of the colon","type":"exact"}],"termid":"MONDO:0005401","xrefs":{"Monarch":{"xref_id":"0005401"}}}


id: GO:0007181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a ligand-bound type II transforming growth factor beta (TGF-beta) receptor dimer with a type I TGF-beta receptor dimer, following ligand binding, to form a heterotetrameric TGF-beta receptor complex.","definition_xrefs":["Wikipedia:TGF_beta_signaling_pathway","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"transforming growth factor beta receptor signaling pathway","termid":"GO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003","GO:0023052"],"is_obsolete":false,"name":"transforming growth factor beta receptor complex assembly","synonyms":[{"name":"TGF-beta receptor complex assembly","type":"exact"},{"name":"TGF-beta:type II receptor:type I receptor complex assembly","type":"exact"},{"name":"TGFbeta receptor complex assembly","type":"exact"}],"termid":"GO:0007181"}


id: GO:0032580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the thin, flattened compartments that form the central portion of the Golgi complex.","definition_xrefs":["GOC:mah","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"Golgi cisterna","termid":"GO:0031985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005794"],"is_obsolete":false,"name":"Golgi cisterna membrane","synonyms":[{"name":"Golgi apparatus cisterna membrane","type":"exact"},{"name":"Golgi stack membrane","type":"exact"}],"termid":"GO:0032580"}


id: GO:0003050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by the signaling molecule atrial natriuretic peptide.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by atrial natriuretic peptide","synonyms":[{"name":"blood pressure regulation by ANP","type":"related"},{"name":"blood pressure regulation by atrial natriuretic peptide","type":"exact"}],"termid":"GO:0003050"}


id: PR:O94498
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18E5.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized N-acetyltransferase C18E5.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.08","synonyms":[{"name":"Spom972h-SPBC18E5.08","type":"exact"}],"termid":"PR:O94498"}


id: PBO:0045660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping exoribonuclease","termid":"PBO:0045660"}


id: MONDO:0014779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Wilms tumor in which the cause of the disease is a mutation in the REST gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary Wilms tumor","termid":"MONDO:0003321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"Wilms tumor 6","secondary_identifiers":["OMIM:616806","UMLS:C3891301","GARD:16162","MEDGEN:855962"],"synonyms":[{"name":"WT6","type":"exact"},{"name":"Wilms tumor 6","type":"exact"},{"name":"Wilms tumor 6, susceptibility to","type":"related"},{"name":"Wilms tumor 6; WT6","type":"exact"},{"name":"Wilms tumor type 6","type":"exact"},{"name":"Wilms tumour 6, susceptibility to","type":"related"},{"name":"Wilms tumour 6; WT6","type":"exact"},{"name":"Wilms tumour type 6","type":"exact"}],"termid":"MONDO:0014779","xrefs":{"Monarch":{"xref_id":"0014779"}}}


id: PBO:0090081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aromatic aminotransferase","termid":"PBO:0090081"}


id: GO:1990985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process that results in permanent cessation of all vital functions of a cell upon exposure to oxidative stress.","definition_xrefs":["GOC:pg","PMID:25950479"],"gene_count":0,"genotype_count":0,"name":"obsolete apoptosis in response to oxidative stress (obsolete GO:1990985)","termid":"GO:1990985"}


id: PBO:0012576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing conserved fungal protein","termid":"PBO:0012576"}


id: PATO:0001542
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A phase which starts later than natural start point.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delayed phase","termid":"PATO:0001542"}


id: PBO:0005347
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein cleavage site","termid":"PBO:0005347"}


id: MOD:00246
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and a glycine residue to form glycine thiazole-4-carboxylic acid.","definition_xrefs":["ChEBI:21276","RESID:AA0241","PubMed:8895467","PubMed:8183941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"glycine thiazole-4-carboxylic acid","synonyms":[{"name":"2-(aminomethyl)-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-(azanylmethyl)-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Gly-Cys)","type":"exact"},{"name":"glycine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:00246"}


id: GO:1904933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation in midbrain.","definition_xrefs":["GOC:PARL","GOC:bf","GO_REF:0000058","PMID:18953410","PMID:24431302","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neural precursor cell proliferation","termid":"GO:2000177"},{"relation_name":"regulates","term_name":"cell proliferation in midbrain","termid":"GO:0033278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation in midbrain","synonyms":[{"name":"regulation of cell proliferation in mesencephalon","type":"exact"},{"name":"regulation of mesencepahalic cell proliferation","type":"related"}],"termid":"GO:1904933"}


id: GO:0002244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which precursor cell type acquires the specialized features of a hematopoietic progenitor cell, a class of cell types including myeloid progenitor cells and lymphoid progenitor cells.","definition_xrefs":["GOC:rl","ISBN:0781735149","GOC:add","PMID:16551251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic progenitor cell differentiation","synonyms":[{"name":"haematopoietic progenitor cell differentiation","type":"exact"},{"name":"haemopoietic progenitor cell differentiation","type":"exact"},{"name":"hemopoietic progenitor cell differentiation","type":"exact"}],"termid":"GO:0002244"}


id: PBO:0090410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase Shm2","termid":"PBO:0090410"}


id: PBO:0060450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-N-acetylgalactosaminidase","termid":"PBO:0060450"}


id: GO:0030546
data:
  {"annotated_genes":["SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99785],"is_not":false,"summary":null,"term":"GO:0030546"}]},"cv_name":"molecular_function","definition":"The function of interacting (directly or indirectly) with receptors such that the proportion of receptors in the active form is increased.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor regulator activity","termid":"GO:0030545"},{"relation_name":"is_a","term_name":"molecular function activator activity","termid":"GO:0140677"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140677","GO:0098772"],"is_obsolete":false,"name":"signaling receptor activator activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"receptor activator activity","type":"broad"},{"name":"signalling receptor activator activity","type":"exact"}],"termid":"GO:0030546","terms_by_termid":{"GO:0030546":null}}


id: RO:0002595
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_material_entity_and_a_process","termid":"RO:0002595"}


id: FYPO:0006936
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to plasma membrane during vegetative growth","termid":"FYPO:0002126"},{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane at cell division site during vegetative growth","termid":"FYPO:0005544"},{"relation_name":"is_a","term_name":"abolished protein localization to cell periphery during vegetative growth","termid":"FYPO:0005571"},{"relation_name":"is_a","term_name":"abolished protein localization to membrane during vegetative growth","termid":"FYPO:0005757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane at cell division site during vegetative growth","synonyms":[{"name":"abolished protein localisation to plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abolished protein localization in plasma membrane at cell division site during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell membrane at cell division site during vegetative growth","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during mitotic cell cycle","type":"related"},{"name":"protein localization to plasma membrane at cell division site abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006936"}


id: PBO:0000875
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplicated in S. pombe","termid":"PBO:0000875"}


id: PBO:0082425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Biotin synthase; catalyzes the conversion of dethiobiotin to biotin, which is the last step of the biotin biosynthesis pathway; complements E. coli bioB mutant","termid":"PBO:0082425"}


id: GO:0019685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A complex cycle of enzyme-mediated reactions which catalyzes the reduction of carbon dioxide to sugar. As well as carbon dioxide the cycle requires reducing power in the form of reduced nicotinamide adenine dinucleotide phosphate (NADP) and chemical energy in the form of adenosine triphosphate (ATP). The reduced NADP (NADPH) and ATP are produced by the 'light' reactions.","definition_xrefs":["ISBN:0582015952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"},{"relation_name":"part_of","term_name":"photosynthesis","termid":"GO:0015979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"photosynthesis, dark reaction","termid":"GO:0019685"}


id: MONDO:1012609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Unconjugated hyperbilirubinemia that occurs in horses.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperbilirubinemia, non-human animal","termid":"MONDO:1012974"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconjugated hyperbilirubinemia, horse","secondary_identifiers":["OMIA:000496-9796"],"synonyms":[{"name":"hyperbilirubinaemia I, horse","type":"related"}],"termid":"MONDO:1012609","xrefs":{"Monarch":{"xref_id":"1012609"}}}


id: GO:0005182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete lipopeptide hormone (obsolete GO:0005182)","synonyms":[{"name":"lipopeptide hormone","type":"exact"}],"termid":"GO:0005182"}


id: PBO:0065913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGAP1L intronic transcript 1","termid":"PBO:0065913"}


id: SO:0002053
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby new or enhanced function is conferred on the gene product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gain_of_function_variant","synonyms":[{"name":"gain of function variant","type":"exact"}],"termid":"SO:0002053"}


id: GO:1902672
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a right anterior flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["GO_REF:0000064","PMID:16607022","GOC:TermGenie","ISBN:9780124260207","PMID:5961344","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"right anterior flagellum","termid":"GO:0097555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"right anterior basal body","synonyms":[{"name":"cilial basal body of right anterior cilium","type":"exact"},{"name":"cilial basal body of right anterior flagellum","type":"exact"},{"name":"ciliary basal body of right anterior cilium","type":"exact"},{"name":"ciliary basal body of right anterior flagellum","type":"exact"},{"name":"cilium basal body of right anterior cilium","type":"exact"},{"name":"cilium basal body of right anterior flagellum","type":"exact"},{"name":"microtubule basal body of right anterior cilium","type":"exact"},{"name":"microtubule basal body of right anterior flagellum","type":"exact"},{"name":"right anterior flagellum ciliary basal body","type":"exact"}],"termid":"GO:1902672"}


id: GO:0042011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-16.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-16 binding","synonyms":[{"name":"IL-16 binding","type":"exact"}],"termid":"GO:0042011"}


id: GO:0046128
data:
  {"annotated_genes":["SJAG_01070","SJAG_00044","SJAG_06634","SJAG_02959","SJAG_00134","SJAG_03881","SJAG_03096","SJAG_02580","SJAG_02582","SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[87904,87905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[90871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046085"},{"annotations":[117226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[70213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[94086,66911,61981,73855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any ribonucleoside, a nucleoside in which purine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside metabolic process","termid":"GO:0009119"},{"relation_name":"is_a","term_name":"purine nucleoside metabolic process","termid":"GO:0042278"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02959":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine ribonucleoside metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside metabolism","type":"exact"}],"termid":"GO:0046128","terms_by_termid":{"GO:0006154":null,"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0046085":null,"GO:0046086":null}}


id: PBO:0064336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase family member 5","termid":"PBO:0064336"}


id: GO:0015390
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: purine(out) + Na+(out) = nucleoside(in) + Na+(in).","definition_xrefs":["TC:2.A.41.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"purine-specific nucleoside:sodium symporter activity","termid":"GO:0015390"}


id: GO:0022602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the sexual cycle seen in females, often with physiologic changes in the endometrium that recur at regular intervals during the reproductive years.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"rhythmic process","termid":"GO:0048511"},{"relation_name":"part_of","term_name":"ovulation cycle","termid":"GO:0042698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovulation cycle process","synonyms":[{"name":"estrous cycle process","type":"related"},{"name":"menstrual cycle process","type":"related"}],"termid":"GO:0022602"}


id: PBO:0001476
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.4.99.7","termid":"PBO:0001476"}


id: GO:0043215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of daunorubicin, an anthracycline antibiotic produced by Streptomyces coeruleorubidus or S. peucetius and used as an antineoplastic into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mlg","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"daunorubicin transport","termid":"GO:0043215"}


id: GO:0006497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of lipid groups to an amino acid in a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"part_of","term_name":"lipoprotein biosynthetic process","termid":"GO:0042158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"protein lipidation","secondary_identifiers":["RESID:AA0160","RESID:AA0308","RESID:AA0316","RESID:AA0107","RESID:AA0166","RESID:AA0163","GO:0042050","RESID:AA0078","RESID:AA0079","RESID:AA0080","RESID:AA0059","RESID:AA0223","RESID:AA0309","RESID:AA0104","RESID:AA0161","RESID:AA0307","RESID:AA0290","RESID:AA0162","RESID:AA0103","RESID:AA0060","RESID:AA0102","RESID:AA0106","RESID:AA0158","RESID:AA0077","RESID:AA0159"],"synonyms":[{"name":"lipid:protein modification","type":"exact"},{"name":"protein amino acid lipidation","type":"exact"}],"termid":"GO:0006497"}


id: MONDO:0045046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of thyroid hormone metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland disorder","termid":"MONDO:0003240"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"inherited thyroid metabolism disease","secondary_identifiers":["ICD9:246.8","SCTID:36985004","MEDGEN:543589","UMLS:C0271824"],"synonyms":[{"name":"inborn error of thyroid hormone metabolic process","type":"exact"},{"name":"inborn thyroid hormone metabolic process disorder","type":"exact"},{"name":"inherited disorder of thyroid metabolism","type":"exact"},{"name":"rare inborn error of thyroid hormone metabolic process","type":"exact"}],"termid":"MONDO:0045046","xrefs":{"Monarch":{"xref_id":"0045046"}}}


id: PBO:0034199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-intracellular_endoparasite_of","termid":"PBO:0034199"}


id: PBO:0087288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silenced copy of a1 at HMR; homeobox corepressor that interacts with Alpha2p to repress haploid-specific gene transcription in diploid cells","termid":"PBO:0087288"}


id: GO:0002647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of central tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of central tolerance induction","termid":"GO:0002646"},{"relation_name":"negatively_regulates","term_name":"central tolerance induction","termid":"GO:0002508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of central tolerance induction","synonyms":[{"name":"down regulation of central tolerance induction","type":"exact"},{"name":"down-regulation of central tolerance induction","type":"exact"},{"name":"downregulation of central tolerance induction","type":"exact"},{"name":"inhibition of central tolerance induction","type":"narrow"}],"termid":"GO:0002647"}


id: FYPO:0008309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell divides with a greater surface area than normal (i.e. compared to wild-type cells under the same conditions).","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable swollen vegetative cell","termid":"FYPO:0002377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000004","FYPO:0000002","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"increased cell surface area at division","termid":"FYPO:0008309"}


id: PBO:0066728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 25","termid":"PBO:0066728"}


id: PBO:0002181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-actinin","termid":"PBO:0002181"}


id: MONDO:1010312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopetrosis with gingival hamartomas that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis, non-human animal","termid":"MONDO:1010300"},{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopetrosis with gingival hamartomas, non-human animal","secondary_identifiers":["OMIA:001887"],"termid":"MONDO:1010312","xrefs":{"Monarch":{"xref_id":"1010312"}}}


id: PBO:0060853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEK2 pseudogene 1","termid":"PBO:0060853"}


id: PBO:0046210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 3","termid":"PBO:0046210"}


id: PBO:0079755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urocortin","termid":"PBO:0079755"}


id: PBO:0050031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DQ beta 3","termid":"PBO:0050031"}


id: PBO:0048535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 8 pseudogene 1","termid":"PBO:0048535"}


id: PBO:0059121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate carrier 1 like","termid":"PBO:0059121"}


id: MONDO:0000749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A breast disease characterized by a collection of pus in the breast.","definition_xrefs":["DOID:0060323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"},{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast abscess","secondary_identifiers":["icd11.foundation:1033306788","SCTID:28432003","UMLS:C0151463","MEDGEN:508760"],"termid":"MONDO:0000749","xrefs":{"Monarch":{"xref_id":"0000749"}}}


id: PR:O74366
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor IIH subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02813","PRO:DNx","PANTHER:PTHR12831:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.07c","secondary_identifiers":["UniProtKB:O74366"],"synonyms":[{"name":"RNA polymerase II transcription factor B 34 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B p34 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GTF2H3","type":"exact"}],"termid":"PR:O74366"}


id: PBO:0004609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp2","termid":"PBO:0004609"}


id: PBO:0036204
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K5,_H4-K8,_H4-K12_and_H4-K16_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036204"}


id: GO:1904310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cordycepin stimulus.","definition_xrefs":["PMID:21597460","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to cordycepin","termid":"GO:1904309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cordycepin","synonyms":[{"name":"cellular response to 3'-deoxyadenosine","type":"exact"}],"termid":"GO:1904310"}


id: PBO:0027489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_substance_in_cell_during_G0","termid":"PBO:0027489"}


id: PBO:0059682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 48","termid":"PBO:0059682"}


id: PATO:0001068
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001068 relative strain (obsolete PATO:0001068)","termid":"PATO:0001068"}


id: GO:0016516
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-4 (IL-4) and consists of an alpha chain that binds IL-4 with high affinity and a gamma common chain that also forms part of the interleukin-2 receptor.","definition_xrefs":["PMID:10358772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"interleukin-4 receptor complex","synonyms":[{"name":"IL-4 receptor complex","type":"exact"}],"termid":"GO:0016516"}


id: PBO:0112845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 6-1","termid":"PBO:0112845"}


id: GO:0014911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of smooth muscle cell migration.","definition_xrefs":["GOC:mtg_muscle","CL:0000192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle cell migration","termid":"GO:0014910"},{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"positively_regulates","term_name":"smooth muscle cell migration","termid":"GO:0014909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of smooth muscle cell migration","termid":"GO:0014911"}


id: MONDO:0001365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"middle ear disorder","termid":"MONDO:0003276"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrosis of ear ossicle","secondary_identifiers":["DOID:11783","ICD9:385.24"],"synonyms":[{"name":"partial loss or necrosis of ear ossicles","type":"exact"}],"termid":"MONDO:0001365","xrefs":{"Monarch":{"xref_id":"0001365"}}}


id: GO:0034933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-hydroxy-6-methoxypyrene + XCH3 = 1,6-dimethoxypyrene + HX.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-hydroxy-6-methoxypyrene methyltransferase activity (obsolete GO:0034933)","termid":"GO:0034933"}


id: MOD:01333
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to 6x(13)C labeled L-isoleucine.","definition_xrefs":["PubMed:12716131","Unimod:188#I","PubMed:12766232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-isoleucine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"}],"termid":"MOD:01333"}


id: GO:0046640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alpha-beta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell activation","termid":"GO:0046634"},{"relation_name":"regulates","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of alpha-beta T cell proliferation","synonyms":[{"name":"regulation of alpha-beta T lymphocyte proliferation","type":"exact"},{"name":"regulation of alpha-beta T-cell proliferation","type":"exact"},{"name":"regulation of alpha-beta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046640"}


id: GO:0141109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a transporter.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function activator activity","termid":"GO:0140677"},{"relation_name":"is_a","term_name":"transporter regulator activity","termid":"GO:0141108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"transporter activator activity","termid":"GO:0141109"}


id: MONDO:0025457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A contagious, neoplastic, pulmonary disease of sheep characterized by hyperplasia and hypertrophy of pneumocytes and epithelial cells of the lung. It is caused by jaagsiekte sheep retrovirus.","definition_xrefs":["MESH:D011648"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"adenocarcinoma, non-human animal","termid":"MONDO:0700099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary adenomatosis, ovine","synonyms":[{"name":"Adenomatoses, Ovine pulmonary","type":"related"},{"name":"Adenomatoses, pulmonary Ovine","type":"related"},{"name":"Jaagsiekte","type":"related"},{"name":"Ovine Adenomatoses, pulmonary","type":"related"},{"name":"Ovine adenomatosis, pulmonary","type":"related"},{"name":"Ovine pulmonary Adenomatoses","type":"related"},{"name":"Ovine pulmonary adenomatosis","type":"related"},{"name":"Ovine pulmonary carcinoma","type":"related"},{"name":"Ovine pulmonary carcinomas","type":"related"},{"name":"adenomatosis, Ovine pulmonary","type":"related"},{"name":"adenomatosis, pulmonary Ovine","type":"related"},{"name":"adenomatosis, pulmonary, Ovine","type":"related"},{"name":"carcinoma, Ovine pulmonary","type":"related"},{"name":"carcinomas, Ovine pulmonary","type":"related"},{"name":"pulmonary Adenomatoses, Ovine","type":"related"},{"name":"pulmonary Ovine Adenomatoses","type":"related"},{"name":"pulmonary Ovine adenomatosis","type":"related"},{"name":"pulmonary carcinoma, Ovine","type":"related"},{"name":"pulmonary carcinomas, Ovine","type":"related"}],"termid":"MONDO:0025457","xrefs":{"Monarch":{"xref_id":"0025457"}}}


id: PBO:0030071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_valine_import","termid":"PBO:0030071"}


id: PBO:0039173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 5","termid":"PBO:0039173"}


id: PBO:0064663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4F","termid":"PBO:0064663"}


id: MONDO:0016721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pineal tumor of neuroepithelial tissue (obsolete MONDO:0016721)","secondary_identifiers":["Orphanet:251905"],"termid":"MONDO:0016721","xrefs":{"Monarch":{"xref_id":"0016721"}}}


id: GO:0006177
data:
  {"annotated_genes":["SJAG_00964","SJAG_01298","SJAG_04634","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59525,63169],"is_not":false,"summary":null,"term":"GO:0006177"},{"annotations":[101533,75993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009168"},{"relation_name":"is_a","term_name":"GMP metabolic process","termid":"GO:0046037"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00964":null,"SJAG_01298":null,"SJAG_04634":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"GMP biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"GMP anabolism","type":"exact"},{"name":"GMP biosynthesis","type":"exact"},{"name":"GMP formation","type":"exact"},{"name":"GMP synthesis","type":"exact"}],"termid":"GO:0006177","terms_by_termid":{"GO:0006177":null,"GO:0032263":null}}


id: GO:0031433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to telethonin, a protein found in the Z disc of striated muscle and which is a substrate of the titin kinase.","definition_xrefs":["GOC:mah","PMID:10481174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0005488","GO:0008092","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"telethonin binding","termid":"GO:0031433"}


id: PBO:0086382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATP-dependent RNA helicase of the DEAD-box family; involved in ribosomal biogenesis; required at post-transcriptional step for efficient retrotransposition; essential for growth under anaerobic conditions","termid":"PBO:0086382"}


id: PBO:0049938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV-H LTR-associating 2","termid":"PBO:0049938"}


id: GO:0044820
data:
  {"annotated_genes":["SJAG_01067","SJAG_03048","SJAG_03092","SJAG_01263","SJAG_01601","SJAG_01777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76446,90090,99458,105461,117257],"is_not":false,"summary":null,"term":"GO:0044820"},{"annotations":[102711],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904537"}]},"cv_name":"biological_process","definition":"The process in which a telomere is maintained in a specific location at the nuclear periphery, as part of a mitotic cell cycle.","definition_xrefs":["PMID:25778919","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere tethering at nuclear periphery","termid":"GO:0034398"},{"relation_name":"part_of","term_name":"mitotic telomere clustering and tethering at nuclear periphery","termid":"GO:0120109"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01067":null,"SJAG_01263":null,"SJAG_01601":null,"SJAG_01777":null,"SJAG_03048":null,"SJAG_03092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitotic telomere tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044820","terms_by_termid":{"GO:0044820":null,"GO:1904537":null}}


id: PBO:0061172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 2-1","termid":"PBO:0061172"}


id: PBO:0086129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for high temperature survival during stationary phase; not required for growth on nonfermentable carbon sources; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086129"}


id: PBO:0116602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNK10 antisense RNA 1","termid":"PBO:0116602"}


id: FYPO:0003080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which genetic imprinting at the mating-type locus does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal genetic imprinting at mating-type locus","termid":"FYPO:0003079"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"abolished genetic imprinting at mating-type locus","synonyms":[{"name":"abolished genetic imprinting at mating-type locus during mitotic cell cycle","type":"related"},{"name":"genetic imprinting at mating-type locus abolished","type":"exact"},{"name":"genetic imprinting at mating-type locus abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003080"}


id: PBO:0089549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, Vid27 family, conserved in fungi and plants","termid":"PBO:0089549"}


id: SO:0002097
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogene derived from a vertebrate immune system gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogene","termid":"SO:0000336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immune_system_pseudogene","synonyms":[{"name":"vertebrate immune system pseudogene","type":"exact"}],"termid":"SO:0002097"}


id: GO:2000659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-1-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-1-mediated signaling pathway","termid":"GO:0070498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-1-mediated signaling pathway","synonyms":[{"name":"regulation of IL-1 alpha-mediated signaling pathway","type":"related"},{"name":"regulation of IL-1 beta-mediated signaling pathway","type":"related"},{"name":"regulation of IL-1-mediated signaling pathway","type":"exact"},{"name":"regulation of interleukin-1 alpha-mediated signaling pathway","type":"related"},{"name":"regulation of interleukin-1 beta-mediated signaling pathway","type":"related"},{"name":"regulation of interleukin-1-mediated signalling pathway","type":"exact"}],"termid":"GO:2000659"}


id: PBO:0005861
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named from map position ade5","termid":"PBO:0005861"}


id: GO:0003409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to creating the structural organization of the optic cup. This process pertains to the physical shaping of the rudimentary structure.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"optic cup morphogenesis involved in camera-type eye development","termid":"GO:0002072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic cup structural organization","synonyms":[{"name":"optic cup structural organisation","type":"exact"}],"termid":"GO:0003409"}


id: GO:0048348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a paraxial mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate specification","termid":"GO:0007501"},{"relation_name":"part_of","term_name":"paraxial mesodermal cell fate commitment","termid":"GO:0048343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesodermal cell fate specification","termid":"GO:0048348"}


id: PBO:0031773
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_G0_to_G1_transition","termid":"PBO:0031773"}


id: PBO:0055722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMNB1 divergent transcript","termid":"PBO:0055722"}


id: GO:0004217
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Specificity close to that of papain. As compared to cathepsin B, cathepsin L exhibits higher activity towards protein substrates, but has little activity on Z-Arg-Arg-NHMec, and no peptidyl-dipeptidase activity.","definition_xrefs":["EC:3.4.22.15"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin L activity (obsolete GO:0004217)","synonyms":[{"name":"Aldrichina grahami cysteine proteinase","type":"narrow"},{"name":"cathepsin L activity","type":"exact"}],"termid":"GO:0004217"}


id: GO:0031940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chromatin silencing at telomeres.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chromatin silencing at telomere (obsolete GO:0031940)","synonyms":[{"name":"activation of chromatin silencing at telomere","type":"narrow"},{"name":"positive regulation of heterochromatic silencing at telomere","type":"exact"},{"name":"stimulation of chromatin silencing at telomere","type":"narrow"},{"name":"up regulation of chromatin silencing at telomere","type":"exact"},{"name":"up-regulation of chromatin silencing at telomere","type":"exact"},{"name":"upregulation of chromatin silencing at telomere","type":"exact"}],"termid":"GO:0031940"}


id: MONDO:0010136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial thyroid dyshormonogenesis in which the cause of the disease is a mutation in the IYD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial thyroid dyshormonogenesis","termid":"MONDO:0010132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"thyroid dyshormonogenesis 4","secondary_identifiers":["DOID:0112188","MEDGEN:87429","MESH:C562770","GARD:18191","SCTID:17885001","UMLS:C0342195","OMIM:274800"],"synonyms":[{"name":"IYD familial thyroid dyshormonogenesis","type":"exact"},{"name":"TDH4","type":"exact"},{"name":"deiodinase deficiency","type":"related"},{"name":"familial thyroid dyshormonogenesis caused by mutation in IYD","type":"exact"},{"name":"hypothyroidism, congenital, due to dyshormonogenesis, 4","type":"exact"},{"name":"iodotyrosine dehalogenase deficiency","type":"related"},{"name":"thyroid dyshormonogenesis 4","type":"exact"},{"name":"thyroid dyshormonogenesis type 4","type":"exact"},{"name":"thyroid hormonogenesis, genetic defect in, 4","type":"exact"}],"termid":"MONDO:0010136","xrefs":{"Monarch":{"xref_id":"0010136"}}}


id: PBO:0064956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 8","termid":"PBO:0064956"}


id: PBO:0027804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_JM216","termid":"PBO:0027804"}


id: PBO:0070133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 47 pseudogene","termid":"PBO:0070133"}


id: FYPO:0005103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is elongated, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"curved vegetative cell","termid":"FYPO:0000016"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"curved elongated vegetative cell","synonyms":[{"name":"curved elongated cell","type":"exact"},{"name":"curved elongated cell during vegetative growth","type":"exact"},{"name":"curved elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005103"}


id: MONDO:0957544
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86692],"is_not":false,"summary":null,"term":"MONDO:0957544"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"auriculocondylar syndrome","termid":"MONDO:0000107"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"is_obsolete":false,"name":"auriculocondylar syndrome 2B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5830664","MEDGEN:1841300","OMIM:620458"],"termid":"MONDO:0957544","terms_by_termid":{"MONDO:0957544":null},"xrefs":{"Monarch":{"xref_id":"0957544"}}}


id: PBO:0050823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HYDIN axonemal central pair apparatus protein","termid":"PBO:0050823"}


id: PBO:0068147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 454","termid":"PBO:0068147"}


id: PBO:0089639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S0C","termid":"PBO:0089639"}


id: GO:0035495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of disassembly of the SNARE complex. The SNARE complex is a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex disassembly","termid":"GO:0043244"},{"relation_name":"regulates","term_name":"SNARE complex disassembly","termid":"GO:0035494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of SNARE complex disassembly","termid":"GO:0035495"}


id: MONDO:0005023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma entirely confined to the mammary ducts. It is also known as DCIS. There is no evidence of invasion of the basement membrane. Currently, it is classified into three categories: High-grade DCIS, intermediate-grade DCIS and low-grade DCIS. In this classification the DCIS grade is defined by a combination of nuclear grade, architectural growth pattern and presence of necrosis. The size of the lesion as well as the grade and the clearance margins play a major role in dictating the most appropriate therapy for DCIS.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma in situ","termid":"MONDO:0003218"},{"relation_name":"is_a","term_name":"breast intraductal proliferative lesion","termid":"MONDO:0004007"},{"relation_name":"is_a","term_name":"breast carcinoma in situ","termid":"MONDO:0004658"},{"relation_name":"is_a","term_name":"breast ductal adenocarcinoma","termid":"MONDO:0005590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ductal breast carcinoma in situ","secondary_identifiers":["DOID:0060074","ONCOTREE:DCIS","UMLS:C0007124","ICD9:233.0","MESH:D002285","NCIT:C2924","EFO:0000432","ICDO:8500/2","MEDGEN:765"],"synonyms":[{"name":"DCIS","type":"exact"},{"name":"breast ductal carcinoma in situ","type":"related"},{"name":"carcinoma in situ of mammary duct","type":"exact"},{"name":"ductal breast carcinoma in situ","type":"exact"},{"name":"ductal carcinoma in situ","type":"exact"},{"name":"ductal carcinoma in situ (DCIS)","type":"exact"},{"name":"ductal carcinoma in situ of breast","type":"exact"},{"name":"ductal carcinoma in situ of the breast","type":"exact"},{"name":"intraductal breast carcinoma","type":"exact"},{"name":"intraductal carcinoma","type":"exact"},{"name":"intraductal carcinoma of breast","type":"exact"},{"name":"intraductal carcinoma of the breast","type":"exact"},{"name":"mammary duct carcinoma in situ","type":"exact"},{"name":"mammary duct in situ carcinoma","type":"exact"},{"name":"non-infiltrating ductal adenocarcinoma of breast","type":"exact"},{"name":"non-infiltrating ductal adenocarcinoma of the breast","type":"exact"},{"name":"non-infiltrating ductal breast adenocarcinoma","type":"exact"},{"name":"non-infiltrating ductal breast carcinoma","type":"exact"},{"name":"non-infiltrating ductal carcinoma of breast","type":"exact"},{"name":"non-infiltrating ductal carcinoma of the breast","type":"exact"},{"name":"non-infiltrating intraductal adenocarcinoma","type":"exact"},{"name":"non-infiltrating intraductal adenocarcinoma of breast","type":"exact"},{"name":"non-infiltrating intraductal adenocarcinoma of the breast","type":"exact"},{"name":"non-infiltrating intraductal breast adenocarcinoma","type":"exact"},{"name":"non-infiltrating intraductal carcinoma","type":"exact"},{"name":"non-invasive ductal adenocarcinoma of breast","type":"exact"},{"name":"non-invasive ductal adenocarcinoma of the breast","type":"exact"},{"name":"non-invasive ductal breast adenocarcinoma","type":"exact"},{"name":"non-invasive ductal breast carcinoma","type":"exact"},{"name":"non-invasive ductal carcinoma of breast","type":"exact"},{"name":"non-invasive ductal carcinoma of the breast","type":"exact"},{"name":"non-invasive intraductal adenocarcinoma of breast","type":"exact"},{"name":"non-invasive intraductal adenocarcinoma of the breast","type":"exact"},{"name":"non-invasive intraductal breast adenocarcinoma","type":"exact"},{"name":"stage 0 mammary duct carcinoma","type":"exact"}],"termid":"MONDO:0005023","xrefs":{"Monarch":{"xref_id":"0005023"}}}


id: PBO:0005360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Ufe1 (predicted)","termid":"PBO:0005360"}


id: PBO:0089568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Imp3","termid":"PBO:0089568"}


id: MONDO:0005264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brief attack (from a few minutes to an hour) of cerebral dysfunction of vascular origin, with no persistent neurological deficit.","definition_xrefs":["NCIT:C50781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain ischemia","termid":"MONDO:0005299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient ischemic attack","secondary_identifiers":["UMLS:C0007787","HP:0002326","SCTID:266257000","ICD9:435","ICD9:435.8","DOID:224","ICD9:435.9","MEDGEN:853","EFO:0003764","MESH:D002546"],"synonyms":[{"name":"TIA","type":"exact"},{"name":"TIA - transient ischaemic attack","type":"exact"},{"name":"TIA - transient ischemic attack","type":"exact"},{"name":"attack, transient ischaemic","type":"exact"},{"name":"attack, transient ischemic","type":"exact"},{"name":"ischaemic attack, transient","type":"exact"},{"name":"ischemic attack, transient","type":"exact"},{"name":"transient cerebral ischaemia","type":"exact"},{"name":"transient cerebral ischemia","type":"related"},{"name":"transient cerebral ischemia (disorder) [ambiguous]","type":"exact"},{"name":"transient ischaemic attack (disease)","type":"exact"},{"name":"transient ischaemic attacks","type":"exact"},{"name":"transient ischemic attack","type":"exact"},{"name":"transient ischemic attack (disease)","type":"exact"},{"name":"transient ischemic attacks","type":"exact"}],"termid":"MONDO:0005264","xrefs":{"Monarch":{"xref_id":"0005264"}}}


id: GO:1901932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bicyclogermacrene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"bicyclogermacrene metabolic process","synonyms":[{"name":"bicyclogermacrene metabolism","type":"exact"}],"termid":"GO:1901932"}


id: SO:1000057
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The changed codon has the same translation product as the original codon.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000057 sequence_variant_causing_synonymous_codon_change_in_transcript (obsolete SO:1000057)","synonyms":[{"name":"mutation causing synonymous codon change in transcript","type":"related"},{"name":"sequence variant causing synonymous codon change in transcript","type":"exact"}],"termid":"SO:1000057"}


id: PBO:0070664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 35","termid":"PBO:0070664"}


id: GO:0090052
data:
  {"annotated_genes":["SJAG_01599","SJAG_00142","SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97516,100640],"is_not":false,"summary":null,"term":"GO:0090052"},{"annotations":[91511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of heterochromatin formation at the centromere. Chromatin silencing at the centromere is the repression of transcription of centromeric DNA by altering the structure of chromatin.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"regulates","term_name":"pericentric heterochromatin formation","termid":"GO:0031508"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_01599":null,"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"regulation of pericentric heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chromatin silencing at centromere","type":"exact"},{"name":"regulation of pericentric heterochromatin assembly","type":"exact"}],"termid":"GO:0090052","terms_by_termid":{"GO:0090052":null,"GO:0090053":null}}


id: GO:0060866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled shedding of a leaf.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscission","termid":"GO:0009838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf abscission","termid":"GO:0060866"}


id: FYPO:0005599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of the first meiotic nuclear division is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of meiosis I","synonyms":[{"name":"delayed meiosis I progression","type":"related"},{"name":"increased duration of first meiotic nuclear division","type":"exact"},{"name":"increased duration of meiosis I progression","type":"exact"},{"name":"prolonged meiosis I","type":"exact"}],"termid":"FYPO:0005599"}


id: PBO:0017554
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bypass of Yeast Ras","termid":"PBO:0017554"}


id: MONDO:0011615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"East Texas bleeding disorder","secondary_identifiers":["MESH:C565275","MEDGEN:342980","OMIM:605913","Orphanet:391320","UMLS:C1853831","GARD:17613"],"synonyms":[{"name":"Bdet","type":"related"},{"name":"bleeding disorder, EAST Texas type","type":"related"}],"termid":"MONDO:0011615","xrefs":{"Monarch":{"xref_id":"0011615"}}}


id: GO:1900507
data:
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id: MONDO:1011012
data:
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id: PBO:0045108
data:
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id: PBO:0087263
data:
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id: PBO:0053333
data:
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id: MONDO:0100545
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