# terms

id: GO:1904022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of G protein-coupled receptor internalization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24732013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of receptor internalization","termid":"GO:0002092"},{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor internalization","termid":"GO:1904020"},{"relation_name":"positively_regulates","term_name":"G protein-coupled receptor internalization","termid":"GO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of G protein-coupled receptor internalization","synonyms":[{"name":"activation of G-protein coupled receptor internalization","type":"narrow"},{"name":"positive regulation of G-protein coupled receptor internalization","type":"exact"},{"name":"up regulation of G-protein coupled receptor internalization","type":"exact"},{"name":"up-regulation of G-protein coupled receptor internalization","type":"exact"},{"name":"upregulation of G-protein coupled receptor internalization","type":"exact"}],"termid":"GO:1904022"}


id: PBO:0049464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycophorin B (MNS blood group)","termid":"PBO:0049464"}


id: PBO:0036274
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coiled-coil domain Telomerase Regulatory protein","termid":"PBO:0036274"}


id: PBO:0111824
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHCH domain","termid":"PBO:0111824"}


id: GO:1905699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xenobiotic transmembrane export. A xenobiotic is a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:TermGenie","PMID:15198509","GO_REF:0000058","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of response to drug","termid":"GO:2001023"},{"relation_name":"regulates","term_name":"xenobiotic detoxification by transmembrane export across the plasma membrane","termid":"GO:1990961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of xenobiotic detoxification by transmembrane export across the plasma membrane","synonyms":[{"name":"regulation of drug transmembrane export","type":"narrow"},{"name":"regulation of xenobiotic transmembrane export","type":"narrow"}],"termid":"GO:1905699"}


id: PBO:0044371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cylicin 1","termid":"PBO:0044371"}


id: MONDO:0001501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma involving a retroperitoneal space.","definition_xrefs":["MONDO:patterns/sarcoma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retroperitoneal cancer","termid":"MONDO:0005941"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"retroperitoneal sarcoma","secondary_identifiers":["MEDGEN:107937","DOID:12341","NCIT:C4832","SCTID:307219002","UMLS:C0585129"],"synonyms":[{"name":"retroperitoneal sarcoma","type":"exact"},{"name":"retroperitoneal space sarcoma","type":"exact"},{"name":"sarcoma of retroperitoneal space","type":"exact"}],"termid":"MONDO:0001501","xrefs":{"Monarch":{"xref_id":"0001501"}}}


id: PBO:0083032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta-1-pyrroline-5-carboxylate dehydrogenase; nuclear-encoded mitochondrial protein involved in utilization of proline as sole nitrogen source; deficiency of human homolog ALDH4A1 causes type II hyperprolinemia (HPII), an autosomal recessive inborn error of metabolism; human homolog ALDH4A1 can complement yeast null mutant","termid":"PBO:0083032"}


id: MONDO:0020093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant form of isolated diffuse palmoplantar keratoderma.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant isolated diffuse palmoplantar keratoderma (obsolete MONDO:0020093)","secondary_identifiers":["Orphanet:98349"],"synonyms":[{"name":"autosomal dominant isolated diffuse palmoplantar hyperkeratosis","type":"exact"},{"name":"isolated diffuse palmoplantar keratoderma, autosomal dominant","type":"exact"}],"termid":"MONDO:0020093","xrefs":{"Monarch":{"xref_id":"0020093"}}}


id: GO:1905700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of xenobiotic transmembrane export. A xenobiotic is a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["PMID:15198509","GOC:TermGenie","GO_REF:0000058","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of xenobiotic detoxification by transmembrane export across the plasma membrane","termid":"GO:1905699"},{"relation_name":"is_a","term_name":"negative regulation of response to drug","termid":"GO:2001024"},{"relation_name":"negatively_regulates","term_name":"xenobiotic detoxification by transmembrane export across the plasma membrane","termid":"GO:1990961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of xenobiotic detoxification by transmembrane export across the plasma membrane","synonyms":[{"name":"down regulation of drug transmembrane export","type":"narrow"},{"name":"down-regulation of drug transmembrane export","type":"narrow"},{"name":"downregulation of drug transmembrane export","type":"narrow"},{"name":"inhibition of drug transmembrane export","type":"narrow"},{"name":"negative regulation of drug transmembrane export","type":"narrow"},{"name":"negative regulation of xenobiotic transmembrane export","type":"narrow"}],"termid":"GO:1905700"}


id: PBO:0041318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 69 pseudogene 4","termid":"PBO:0041318"}


id: PBO:0060593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCAM1 antisense RNA1","termid":"PBO:0060593"}


id: GO:2001026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell chemotaxis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell migration","termid":"GO:0010594"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"regulates","term_name":"endothelial cell chemotaxis","termid":"GO:0035767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell chemotaxis","termid":"GO:2001026"}


id: PBO:0045188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 1","termid":"PBO:0045188"}


id: MONDO:0012538
data:
  {"annotated_genes":["SJAG_03025"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86199],"is_not":false,"summary":null,"term":"MONDO:0012538"}]},"cv_name":"mondo","definition":"Any nemaline myopathy in which the cause of the disease is a mutation in the CFL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"typical nemaline myopathy","termid":"MONDO:0015737"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"nemaline myopathy 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565198","OMIM:610687","UMLS:C1853154","GARD:15493","MEDGEN:343979","DOID:0110934"],"synonyms":[{"name":"CFL2 nemaline myopathy","type":"exact"},{"name":"NEM7","type":"exact"},{"name":"nemaline myopathy 7","type":"exact"},{"name":"nemaline myopathy 7, autosomal recessive","type":"exact"},{"name":"nemaline myopathy caused by mutation in CFL2","type":"exact"},{"name":"nemaline myopathy type 7","type":"exact"}],"termid":"MONDO:0012538","terms_by_termid":{"MONDO:0012538":null},"xrefs":{"Monarch":{"xref_id":"0012538"}}}


id: MONDO:0002968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystic lesion containing lymph. It usually results from injury, gynecologic surgery, or urologic surgery.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphocele","secondary_identifiers":["MEDGEN:7414","MESH:D008210","DOID:4347","SCTID:234110002","UMLS:C0024248","ICD9:457.8","icd11.foundation:1806199285"],"synonyms":[{"name":"lymph cyst","type":"exact"}],"termid":"MONDO:0002968","xrefs":{"Monarch":{"xref_id":"0002968"}}}


id: MONDO:0013837
data:
  {"annotated_genes":["SJAG_04568"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86631],"is_not":false,"summary":null,"term":"MONDO:0013837"}]},"cv_name":"mondo","definition":"Deafness-encephaloneuropathy-obesity-valvulopathy syndrome is a rare mitochondrial disease with marked clinical variability typically characterized by encephalomyopathy, kidney disease (nephrotic syndrome), optic atrophy, early-onset deafness, pancytopenia, obesity, and cardiac disease (valvulopathy). Additionally, macrocephaly, intellectual disability, hyperlactatemia, elevated lactate/pyruvate ratio, insulin-dependent diabetes, livedo reticularis, liver dysfunction and seizures have also been associated.","definition_xrefs":["Orphanet:254898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme Q10 deficiency","termid":"MONDO:0018151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04568":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"deafness-encephaloneuropathy-obesity-valvulopathy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3553354","OMIM:614651","DOID:0070239","GARD:17230","MEDGEN:766268"],"synonyms":[{"name":"COQ10D2","type":"related"},{"name":"coenzyme Q10 deficiency, primary, 2","type":"related"},{"name":"coenzyme Q10 deficiency, primary, type 2","type":"exact"},{"name":"hearing loss-encephaloneuropathy-obesity-valvulopathy syndrome","type":"exact"}],"termid":"MONDO:0013837","terms_by_termid":{"MONDO:0013837":null},"xrefs":{"Monarch":{"xref_id":"0013837"}}}


id: PBO:0077445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 178B","termid":"PBO:0077445"}


id: PBO:0091374
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopy suppressor of RAs","termid":"PBO:0091374"}


id: PBO:0042517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDIP transferase opposite strand, pseudogene","termid":"PBO:0042517"}


id: FYPO:0003940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which m7G(5')pppN diphosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal m7G(5')pppN diphosphatase activity","termid":"FYPO:0003939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished m7G(5')pppN diphosphatase activity","synonyms":[{"name":"abolished mRNA decapping activity","type":"related"},{"name":"m7G(5')pppN diphosphatase activity abolished","type":"exact"}],"termid":"FYPO:0003940"}


id: PBO:0084638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mevalonate pyrophosphate decarboxylase; essential enzyme involved in the biosynthesis of isoprenoids and sterols, including ergosterol; acts as a homodimer","termid":"PBO:0084638"}


id: FYPO:0000518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear transport is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear transport","termid":"FYPO:0005573"},{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal nuclear transport during vegetative growth","synonyms":[{"name":"abnormal nuclear transport during mitotic cell cycle","type":"related"},{"name":"nuclear transport: abnormal during vegetative growth","type":"related"}],"termid":"FYPO:0000518"}


id: PBO:0066208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 22 pseudogene 1","termid":"PBO:0066208"}


id: MONDO:1011633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive ataxia, non-human animal","secondary_identifiers":["OMIA:001091"],"termid":"MONDO:1011633","xrefs":{"Monarch":{"xref_id":"1011633"}}}


id: GO:0009682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A response to non-pathogenic bacteria that confers broad spectrum systemic resistance to disease that does not depend upon salicylic acid signaling.","definition_xrefs":["PMID:23386685","PMID:15233292","PMID:10234273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induced systemic resistance","termid":"GO:0009682"}


id: PBO:0054281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1672","termid":"PBO:0054281"}


id: PBO:0058527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6072","termid":"PBO:0058527"}


id: PBO:0060078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 25","termid":"PBO:0060078"}


id: FYPO:0009039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of potassium chloride than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to potassium chloride","synonyms":[{"name":"resistance to potassium chloride during mitotic cell cycle","type":"related"},{"name":"resistance to potassium chloride during vegetative growth","type":"exact"},{"name":"resistant to potassium chloride","type":"exact"}],"termid":"FYPO:0009039"}


id: GO:0102542
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: aclacinomycin A + H2O = 15-demethoxy-aclacinomycin A + methanol + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete aclacinomycin A methylesterase activity (obsolete GO:0102542)","termid":"GO:0102542"}


id: PBO:0080250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 13 pseudogene","termid":"PBO:0080250"}


id: PBO:0068009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 311","termid":"PBO:0068009"}


id: PBO:0068117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 424","termid":"PBO:0068117"}


id: PBO:0090451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribose diphosphatase, NudF subfamily Ysa1","termid":"PBO:0090451"}


id: PBO:0074832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 28","termid":"PBO:0074832"}


id: MONDO:0017238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"},{"relation_name":"is_a","term_name":"cyanosis, transient neonatal","termid":"MONDO:0013511"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemoglobinopathy Toms River","secondary_identifiers":["Orphanet:280615","GARD:17297","MEDGEN:1683555","UMLS:C5190689"],"synonyms":[{"name":"transient neonatal cyanosis and anaemia due to Toms River Haemoglobin","type":"exact"},{"name":"transient neonatal cyanosis and anemia due to Toms River Hemoglobin","type":"exact"}],"termid":"MONDO:0017238","xrefs":{"Monarch":{"xref_id":"0017238"}}}


id: MONDO:0004536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete villoglandular variant cervical mucinous adenocarcinoma (obsolete MONDO:0004536)","termid":"MONDO:0004536","xrefs":{"Monarch":{"xref_id":"0004536"}}}


id: PBO:0001276
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.36","termid":"PBO:0001276"}


id: MONDO:0016418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple system atrophy, cerebellar type (MSA-c) is a form of multiple system atrophy (MSA) with predominant cerebellar features (gait and limb ataxia, oculomotor dysfunction, and dysarthria).","definition_xrefs":["Orphanet:227510"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-hereditary degenerative ataxia (obsolete MONDO:0016592)","termid":"MONDO:0016592"},{"relation_name":"is_a","term_name":"multiple system atrophy","termid":"MONDO:0007803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"multiple system atrophy, cerebellar type","secondary_identifiers":["GARD:20565","MEDGEN:1843304","UMLS:C5554234","icd11.foundation:1585600114","NANDO:1200035"],"synonyms":[{"name":"MSA, cerebellar type","type":"exact"},{"name":"MSA-c","type":"exact"},{"name":"sporadic OPCA type 1","type":"exact"},{"name":"sporadic olivopontocerebellar atrophy type 1","type":"exact"}],"termid":"MONDO:0016418","xrefs":{"Monarch":{"xref_id":"0016418"}}}


id: GO:0030944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a KDEL sequence, the C terminus tetrapeptide sequence Asp-Asp-Glu-Leu found in proteins that are to be retained in the endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER retention sequence binding","termid":"GO:0046923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0003674","GO:0005048","GO:0005488"],"is_obsolete":false,"name":"DDEL sequence binding","termid":"GO:0030944"}


id: PBO:0060828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nectin cell adhesion molecule 3","termid":"PBO:0060828"}


id: PBO:0075359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 1","termid":"PBO:0075359"}


id: GO:1900166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glial cell-derived neurotrophic factor production.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"glial cell-derived neurotrophic factor production","termid":"GO:0044467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of glial cell-derived neurotrophic factor production","synonyms":[{"name":"regulation of GDNF secretion","type":"narrow"},{"name":"regulation of glial cell line-derived neurotrophic factor secretion","type":"related"},{"name":"regulation of glial cell-derived neurotrophic factor secretion","type":"narrow"}],"termid":"GO:1900166"}


id: GO:0071879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the adenylate cyclase-activating adrenergic receptor protein signaling pathway. An adrenergic receptor signaling pathway is the series of molecular signals generated as a consequence of an adrenergic receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"positively_regulates","term_name":"adrenergic receptor signaling pathway","termid":"GO:0071875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of adenylate cyclase-activating adrenergic receptor signaling pathway","synonyms":[{"name":"positive regulation of adrenergic receptor signaling pathway","type":"broad"},{"name":"positive regulation of adrenergic receptor signalling pathway","type":"exact"}],"termid":"GO:0071879"}


id: GO:0120526
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an L-polyhomomethionine + 2 O2 + 2 reduced [NADPH--hemoprotein reductase] = an (E)-omega-(methylsulfanyl)-alkanal oxime + CO2 + 2 H(+) + 3 H2O + 2 oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:51972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"homomethionine N-monooxygenase activity","secondary_identifiers":["EC:1.14.14.42","KEGG_REACTION:R11646","MetaCyc:RXN-18175"],"termid":"GO:0120526"}


id: SO:0002330
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of mRNA 2 bases long that is included as part of two separate codons during the process of translational frameshifting (GO:0006452), causing the reading frame to be different.","definition_xrefs":["SO:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_frameshift","termid":"SO:0001210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_2_translational_frameshift","synonyms":[{"name":"minus 2 ribosomal frameshift","type":"exact"},{"name":"minus 2 ribosomal slippage","type":"exact"},{"name":"minus 2 translational frameshift","type":"exact"}],"termid":"SO:0002330"}


id: GO:0090520
data:
  {"annotated_genes":["SJAG_05290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105538],"is_not":false,"summary":null,"term":"GO:0090520"}]},"cv_name":"biological_process","definition":"The series of molecular signals mediated by a sphingolipid.","definition_xrefs":["PMID:9525917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"sphingolipid mediated signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ceramide 1-phosphate signaling pathway","type":"narrow"},{"name":"ceramide signaling pathway","type":"narrow"},{"name":"sphingolipid mediated signal transduction","type":"exact"},{"name":"sphingolipid signaling pathway","type":"related"},{"name":"sphingolipid-mediated signaling pathway","type":"exact"},{"name":"sphingosine signaling pathway","type":"narrow"}],"termid":"GO:0090520","terms_by_termid":{"GO:0090520":null}}


id: GO:0018910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzene, C6H6, a volatile, very inflammable liquid, contained in the naphtha produced by the destructive distillation of coal, from which it is separated by fractional distillation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzene metabolic process","synonyms":[{"name":"benzene metabolism","type":"exact"}],"termid":"GO:0018910"}


id: GO:0005988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lactose, the disaccharide galactopyranosyl-glucose.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"lactose metabolic process","synonyms":[{"name":"lactose metabolism","type":"exact"}],"termid":"GO:0005988"}


id: GO:0097568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-membrane bound, semi-organized microtubule array of unknown function found in Giardia species (trophozoite stage). It is located on the dorsal side of the trophozoite, slightly posterior to the ventral disc.","definition_xrefs":["PMID:5961344","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"median body","synonyms":[{"name":"parabasal body","type":"related"}],"termid":"GO:0097568"}


id: GO:0033044
data:
  {"annotated_genes":["SJAG_00718","SJAG_01297","SJAG_01515","SJAG_00666","SJAG_01956","SJAG_04968","SJAG_00883","SJAG_03681","SJAG_04259","SJAG_04999","SJAG_02336","SJAG_00823","SJAG_04140","SJAG_02169","SJAG_01837","SJAG_02342","SJAG_03353","SJAG_02990","SJAG_00145","SJAG_01805","SJAG_03624","SJAG_03997","SJAG_02451","SJAG_01716","SJAG_01825","SJAG_03591","SJAG_00142","SJAG_04464","SJAG_02332","SJAG_05290","SJAG_05329","SJAG_01082","SJAG_04884","SJAG_05978","SJAG_04280","SJAG_04853","SJAG_03327","SJAG_03048","SJAG_04573","SJAG_02380","SJAG_03126","SJAG_00369","SJAG_00082","SJAG_04126","SJAG_04597","SJAG_00244","SJAG_00433","SJAG_01330","SJAG_01679","SJAG_04699","SJAG_02498","SJAG_02592","SJAG_03575","SJAG_00460","SJAG_04638","SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114165,108620,112339,99923,116288,91048,107593,104234,114654],"is_not":false,"rel_names":["negatively_regulates","positively_regulates","regulates","is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[114882,106679],"is_not":false,"rel_names":["is_a","regulates","negatively_regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[117058,75746],"is_not":false,"rel_names":["is_a","regulates","negatively_regulates"],"summary":null,"term":"GO:0033316"},{"annotations":[100476,99022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[100477,102629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[71109,73411,78736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007091"},{"annotations":[114885,102138,106681,110277,115946,99765],"is_not":false,"rel_names":["negatively_regulates","is_a","regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[102702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[118343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"},{"annotations":[99023],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[103621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[94529],"is_not":false,"rel_names":["regulates","positively_regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[102710],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902845"},{"annotations":[107769,106720,106622,115724,92070,106944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045875"},{"annotations":[105536,116397,112340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[99296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[102716,117064,89975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[114170],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[95495],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:1905191"},{"annotations":[117065],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[117066,102720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903380"},{"annotations":[100478,94134,102447,102721,111752,115154,98029],"is_not":false,"rel_names":["regulates","is_a","positively_regulates"],"summary":null,"term":"GO:0045842"},{"annotations":[111578,102722,117068,90324,94135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[90325,94745],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1902846"},{"annotations":[111813],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110161"},{"annotations":[91511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"},{"annotations":[91512,110716,94705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"},{"annotations":[107771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045876"},{"annotations":[97515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032215"},{"annotations":[102732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062123"},{"annotations":[101678],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:1905325"},{"annotations":[111393],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032888"},{"annotations":[115437],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110162"},{"annotations":[103569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902681"},{"annotations":[101175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007063"},{"annotations":[77240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032210"}]},"cv_name":"biological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process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a chromosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"chromosome 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of chromosome organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of chromosome organisation","type":"exact"},{"name":"regulation of chromosome organization and biogenesis","type":"related"}],"termid":"GO:0033044","terms_by_termid":{"GO:0007063":null,"GO:0007091":null,"GO:0007094":null,"GO:0031453":null,"GO:0032210":null,"GO:0032215":null,"GO:0032888":null,"GO:0033316":null,"GO:0045842":null,"GO:0045875":null,"GO:0045876":null,"GO:0062123":null,"GO:0090053":null,"GO:0090055":null,"GO:0090267":null,"GO:0110161":null,"GO:0110162":null,"GO:0140429":null,"GO:0140499":null,"GO:1902103":null,"GO:1902424":null,"GO:1902425":null,"GO:1902426":null,"GO:1902681":null,"GO:1902845":null,"GO:1902846":null,"GO:1903380":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1905560":null,"GO:1905561":null,"GO:1990949":null,"GO:1990950":null,"GO:2000816":null}}


id: PBO:0116542
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmission-distorting killer","termid":"PBO:0116542"}


id: GO:0000736
data:
  {"annotated_genes":["SJAG_02556"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75316],"is_not":false,"summary":null,"term":"GO:0000736"}]},"cv_name":"biological_process","definition":"During DSBR via single-strand annealing, the removal of nonhomologous sequences at the broken 3' single-strand DNA end before DNA repair synthesis can occur.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"removal of nonhomologous ends","termid":"GO:0000735"},{"relation_name":"part_of","term_name":"double-strand break repair via single-strand annealing","termid":"GO:0045002"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"double-strand break repair via single-strand annealing, removal of nonhomologous ends","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0000736","terms_by_termid":{"GO:0000736":null}}


id: GO:0031802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5 metabotropic glutamate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 5 metabotropic glutamate receptor binding","synonyms":[{"name":"type 5 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031802"}


id: GO:0034441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a lipid or protein within a plasma lipoprotein particle by oxidation of the lipid or one or more amino acids.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle remodeling","termid":"GO:0034369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasma lipoprotein particle oxidation","synonyms":[{"name":"plasma lipoprotein oxidation","type":"related"}],"termid":"GO:0034441"}


id: MONDO:0007019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory pathologic process that affects the vulva and the vagina.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginitis","termid":"MONDO:0002234"},{"relation_name":"is_a","term_name":"vulvitis","termid":"MONDO:0007018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulvovaginitis","secondary_identifiers":["EFO:1001240","DOID:2273","NCIT:C35131","UMLS:C0042998","SCTID:53277000","MEDGEN:12129","MESH:D014848","MedDRA:10047794"],"synonyms":[{"name":"Vulvo-vaginitis","type":"exact"}],"termid":"MONDO:0007019","xrefs":{"Monarch":{"xref_id":"0007019"}}}


id: GO:0070621
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the epidermal growth factor receptor (EGFR), Grb2, the adaptor protein SHC and the guanine nucleotide exchange factor Sos (or an ortholog thereof, such as mSos1), and is involved in linking EGFR activation to the p21-Ras pathway.","definition_xrefs":["GOC:mah","PMID:7798267","PMID:8940013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"EGFR-Shc-Grb2-Sos complex","termid":"GO:0070621"}


id: MONDO:0100569
data:
  {"annotated_genes":["SJAG_01378"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014690"}]},"cv_name":"mondo","definition":"A spectrum of conditions, including dyskeratosis congenita, Hoyeraal-Hreidarsson syndrome, hereditary aplastic anemia, and pulmonary fibrosis, typically characterized by shortened telomeres due to a pathogenic variant(s) in ACD that results in impaired telomere maintenance.","direct_ancestors":[{"relation_name":"is_a","term_name":"ACD-related telomere biology disorder","termid":"MONDO:0800469"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01378":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"ACD-related short telomere syndrome","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100569","terms_by_termid":{"MONDO:0014690":null},"xrefs":{"Monarch":{"xref_id":"0100569"}}}


id: RO:0002328
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally_related_to","termid":"RO:0002328"}


id: PBO:0090608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylulose kinase Xks1","termid":"PBO:0090608"}


id: MONDO:0013508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 19, autosomal dominant","secondary_identifiers":["UMLS:C3151410","MEDGEN:462760","OMIM:613969"],"synonyms":[{"name":"MYP19","type":"exact"},{"name":"myopia 19, autosomal dominant","type":"exact"}],"termid":"MONDO:0013508","xrefs":{"Monarch":{"xref_id":"0013508"}}}


id: PBO:0056816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 9","termid":"PBO:0056816"}


id: GO:0045682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epidermis development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"epidermis development","termid":"GO:0008544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epidermis development","synonyms":[{"name":"regulation of epidermal development","type":"exact"},{"name":"regulation of hypodermis development","type":"related"}],"termid":"GO:0045682"}


id: GO:0033609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving oxalate, the organic acid ethanedioate.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"oxalate metabolic process","synonyms":[{"name":"ethanedioate metabolic process","type":"exact"},{"name":"ethanedioic acid metabolic process","type":"exact"},{"name":"oxalate metabolism","type":"exact"},{"name":"oxalic acid metabolic process","type":"exact"}],"termid":"GO:0033609"}


id: PBO:0049608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 11","termid":"PBO:0049608"}


id: PBO:0049276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gelsolin","termid":"PBO:0049276"}


id: MONDO:0019738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic uremic syndrome, atypical, susceptibility to, 1","termid":"MONDO:0009335"},{"relation_name":"is_a","term_name":"atypical hemolytic-uremic syndrome","termid":"MONDO:0016244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"atypical hemolytic-uremic syndrome with H factor anomaly","secondary_identifiers":["Orphanet:93579"],"synonyms":[{"name":"D-HUS with H factor anomaly","type":"exact"},{"name":"aHUS with H factor anomaly","type":"exact"},{"name":"atypical HUS with H factor anomaly","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhea with H factor anomaly","type":"exact"},{"name":"hemolytic-uremic syndrome without diarrhoea with H factor anomaly","type":"exact"}],"termid":"MONDO:0019738","xrefs":{"Monarch":{"xref_id":"0019738"}}}


id: PBO:0047702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin 1","termid":"PBO:0047702"}


id: PATO:0002142
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bracket","termid":"PATO:0002142"}


id: PBO:0067157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 209, pseudogene","termid":"PBO:0067157"}


id: FYPO:0001393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the activation of monopolar cell growth, i.e. the initiation of growth at the old end of a cell following cell division, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of cell growth","termid":"FYPO:0001392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal activation of monopolar cell growth","synonyms":[{"name":"abnormal regulation of monopolar vegetative cell growth","type":"related"}],"termid":"FYPO:0001393"}


id: FYPO:0005746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein export from nucleus is decreased when the cell is subject to glucose starvation. Export of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein export from nucleus","termid":"FYPO:0005745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein export from nucleus during glucose starvation","synonyms":[{"name":"decreased protein export from nucleus during cellular response to glucose starvation","type":"exact"},{"name":"decreased protein export from nucleus during glucose depletion","type":"exact"},{"name":"decreased protein export from nucleus during glucose deprivation","type":"exact"},{"name":"decreased protein export from nucleus during glucose limitation","type":"related"},{"name":"reduced protein export from nucleus during glucose starvation","type":"exact"}],"termid":"FYPO:0005746"}


id: PBO:0030158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell,_abnormal_cell_shape,_normal_cell_size","termid":"PBO:0030158"}


id: PR:O74445
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit S10B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23073:SF10","OMA:SCHPO04299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease subunit rpt4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.16","secondary_identifiers":["UniProtKB:O74445"],"synonyms":[{"name":"Spom972h-PSMC6","type":"exact"}],"termid":"PR:O74445"}


id: PATO:0000806
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000806 olfactory value (obsolete PATO:0000806)","termid":"PATO:0000806"}


id: PBO:0072481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 10","termid":"PBO:0072481"}


id: PBO:0029913
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_lanosterol_level","termid":"PBO:0029913"}


id: MONDO:0800387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poisoning that is caused by exposure to sulfur mustard. The effects of mustard poisoning may be local, systemic, or both, depending on environmental conditions, exposed organs, and the extent and duration of exposure. The toxic effects of mustard include inhibition of mitosis, NAD depletion, decreased tissue respiration and finally cell death.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur mustard poisoning","synonyms":[{"name":"mustard agent poisoning","type":"exact"},{"name":"mustard gas poisoning","type":"exact"}],"termid":"MONDO:0800387","xrefs":{"Monarch":{"xref_id":"0800387"}}}


id: GO:0007244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. MAPKKK cascade involved in transduction of mating pheromone signal, as described in Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPKKK cascade (mating sensu Saccharomyces) (obsolete GO:0007244)","synonyms":[{"name":"MAPKKK cascade (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007244"}


id: GO:0014055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of acetylcholine by a cell. The acetylcholine acts as a neurotransmitter that acts in both the peripheral nervous system (PNS) and central nervous system (CNS).","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"acetylcholine secretion","termid":"GO:0061526"},{"relation_name":"part_of","term_name":"synaptic transmission, cholinergic","termid":"GO:0007271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"acetylcholine secretion, neurotransmission","termid":"GO:0014055"}


id: GO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA exon ligation process that rejoins two exons of a pre-tRNA which has had the intron removed.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA exon ligation","termid":"GO:0000378"},{"relation_name":"part_of","term_name":"tRNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0006388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA exon ligation","termid":"GO:0000968"}


id: SO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding threonyl tRNA (SO:000270).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine_tRNA_primary_transcript","synonyms":[{"name":"threonine tRNA primary transcript","type":"exact"}],"termid":"SO:0000227"}


id: GO:0098621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phosphoseryl-tRNA(Sec) + selenophosphoric acid + H2O => L-selenocysteinyl-tRNA(Sec) + 2 phosphoric acid.","definition_xrefs":["RHEA:25041","PMID:17142313","PMID:19608919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenotransferase activity","termid":"GO:0016785"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0016740","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"O-phosphoseryl-tRNA(Sec) selenium transferase activity","secondary_identifiers":["EC:2.9.1.2","Reactome:R-HSA-2408555"],"synonyms":[{"name":"O-phospho-L-seryl-tRNA(Sec):L-selenocysteinyl-tRNA synthase","type":"exact"},{"name":"O-phosphoseryl-tRNA:selenocysteinyl-tRNA synthase","type":"exact"},{"name":"SepSecS","type":"exact"},{"name":"phosphoseryl-selenocysteinyl-tRNA selenium transferase activity","type":"exact"}],"termid":"GO:0098621"}


id: PBO:0070975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 13","termid":"PBO:0070975"}


id: MONDO:0019518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Waardenburg-Shah syndrome (WSS) is a neurocristopathy characterized by the association of Waardenburg syndrome (sensorineural hearing loss and pigmentary abnormalities) and Hirschsprung disease.","definition_xrefs":["Orphanet:897"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"is_a","term_name":"Waardenburg syndrome","termid":"MONDO:0018094"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg-Shah syndrome","secondary_identifiers":["GARD:5524","icd11.foundation:1420151003","NCIT:C124842"],"synonyms":[{"name":"Hirschsprung disease with pigmentary anomaly","type":"related"},{"name":"Shah-Waardenburg syndrome","type":"exact"},{"name":"WS4","type":"exact"},{"name":"Waardenburg syndrome type 4","type":"exact"},{"name":"Waardenburg syndrome type IV","type":"exact"},{"name":"Waardenburg-Hirschsprung disease","type":"related"},{"name":"Waardenburg-Hirschsprung syndrome","type":"exact"},{"name":"Waardenburg-Shah syndrome","type":"exact"}],"termid":"MONDO:0019518","xrefs":{"Monarch":{"xref_id":"0019518"}}}


id: PBO:0047873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(3)(p14.2)","termid":"PBO:0047873"}


id: PBO:0055449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2881","termid":"PBO:0055449"}


id: GO:0021806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial stages of cell motility involved in the glial-mediated movement of cells in the developing cerebral cortex.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","GO_REF:0000021","PMID:12626695","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"ameboidal-type cell migration","termid":"GO:0001667"},{"relation_name":"part_of","term_name":"cell motility involved in cerebral cortex radial glia guided migration","termid":"GO:0021814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"initiation of movement involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"initiation of movement involved in cerebral cortex glial-mediated radial migration","type":"related"}],"termid":"GO:0021806"}


id: MONDO:0012401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital stromal corneal dystrophy (CSCD) is an extremely rare form of stromal corneal dystrophy characterized by opaque flaky or feathery clouding of the corneal stroma, and moderate to severe visual loss.","definition_xrefs":["Orphanet:101068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"stromal corneal dystrophy","termid":"MONDO:0020213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital stromal corneal dystrophy","secondary_identifiers":["MEDGEN:400601","DOID:0060445","OMIM:610048","icd11.foundation:1796933876","ICD9:371.56","SCTID:702359002","UMLS:C1864738","MESH:C566452","GARD:16943"],"synonyms":[{"name":"CSCD","type":"exact"},{"name":"Witschel dystrophy","type":"exact"},{"name":"congenital hereditary stromal dystrophy","type":"exact"},{"name":"congenital stromal corneal dystrophy","type":"exact"},{"name":"corneal dystrophy, congenital stromal","type":"related"}],"termid":"MONDO:0012401","xrefs":{"Monarch":{"xref_id":"0012401"}}}


id: PBO:0038965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activity dependent neuroprotector homeobox","termid":"PBO:0038965"}


id: PBO:0113194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major of three pyruvate decarboxylase isozymes; key enzyme in alcoholic fermentation; decarboxylates pyruvate to acetaldehyde; involved in amino acid catabolism; subject to glucose-, ethanol-, and autoregulation; activated by phosphorylation in response to glucose levels; N-terminally propionylated in vivo; protein tyrosine nitration on Tyr157 or Tyr344 inhibits activity and impairs fermentation","termid":"PBO:0113194"}


id: MONDO:0032633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 29","secondary_identifiers":["UMLS:C4748830","DOID:0112084","GARD:16330","OMIM:618250","MEDGEN:1648451"],"synonyms":[{"name":"MC1DN29","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 29","type":"related"}],"termid":"MONDO:0032633","xrefs":{"Monarch":{"xref_id":"0032633"}}}


id: GO:0046453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dipyrrins (pyrromethanes), compounds containing two pyrrole rings linked through a methine, -CH=, group.","definition_xrefs":["PMID:17430001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dipyrrin metabolic process","synonyms":[{"name":"dipyrrin metabolism","type":"exact"}],"termid":"GO:0046453"}


id: MONDO:0023273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of dermatofibrosarcoma protuberans characterized by the presence of melanin-pigmented dendritic cells.","definition_xrefs":["NCIT:C9430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatofibrosarcoma protuberans","termid":"MONDO:0011934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pigmented dermatofibrosarcoma protuberans","secondary_identifiers":["MEDGEN:90786","SCTID:398670003","UMLS:C0334464"],"synonyms":[{"name":"Bednar Tumor","type":"related"},{"name":"Bednar Tumour","type":"related"},{"name":"Bednar's Tumor","type":"related"},{"name":"Bednar's Tumour","type":"related"},{"name":"Bednars Tumor","type":"related"},{"name":"Bednars Tumour","type":"related"},{"name":"DFSP, Pigmented","type":"related"},{"name":"DFSPs, Pigmented","type":"related"},{"name":"Dermatofibrosarcoma Protuberan, Pigmented","type":"related"},{"name":"Dermatofibrosarcoma Protuberans, Pigmented","type":"related"},{"name":"Pigmented DFSP","type":"related"},{"name":"Pigmented DFSPs","type":"related"},{"name":"Pigmented Dermatofibrosarcoma Protuberan","type":"related"},{"name":"Pigmented Dermatofibrosarcoma Protuberans","type":"related"},{"name":"Pigmented Dermatofibrosarcoma Protuberans (Bednar Tumor)","type":"related"},{"name":"Pigmented dermatofibrosarcoma","type":"related"},{"name":"Pigmented dermatofibrosarcoma protuberans","type":"related"},{"name":"Pigmented dermatofibrosarcoma protuberans of skin","type":"related"},{"name":"Pigmented storiform neurofibroma","type":"related"},{"name":"Protuberan, Pigmented Dermatofibrosarcoma","type":"related"},{"name":"Protuberans, Pigmented Dermatofibrosarcoma","type":"related"},{"name":"Tumor, Bednar","type":"related"},{"name":"Tumor, Bednar's","type":"related"},{"name":"bednar tumor","type":"exact"},{"name":"bednar tumour","type":"exact"},{"name":"pigmented dermatofibrosarcoma protuberans","type":"exact"},{"name":"pigmented dermatofibrosarcoma protuberans (bednar tumor)","type":"exact"}],"termid":"MONDO:0023273","xrefs":{"Monarch":{"xref_id":"0023273"}}}


id: PBO:0050428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein K","termid":"PBO:0050428"}


id: PBO:0042273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 7 pseudogene 2","termid":"PBO:0042273"}


id: GO:0098556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the rough endoplasmic reticulum membrane that faces the cytoplasm.","definition_xrefs":["GOC:dos","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of endoplasmic reticulum membrane","termid":"GO:0098554"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005789","GO:0005575","GO:0005783","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic side of rough endoplasmic reticulum membrane","termid":"GO:0098556"}


id: GO:0090602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nucleated precursor cells lose their nucleus as part of sieve element differentiation. The nuclear contents are released and degraded in the cytoplasm at the same time as other organelles are rearranged and the cytosol is degraded.","definition_xrefs":["PMID:25081480","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enucleation","termid":"GO:0090601"},{"relation_name":"part_of","term_name":"sieve element differentiation","termid":"GO:0090603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sieve element enucleation","termid":"GO:0090602"}


id: PR:Q9HDV9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycine cleavage system H protein, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11715:SF0","OMA:SCHPO03446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage system H protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.01","secondary_identifiers":["UniProtKB:Q9HDV9"],"synonyms":[{"name":"Spom972h-GCSH","type":"exact"},{"name":"glycine decarboxylase complex subunit H (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDV9"}


id: GO:1901750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene D4.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene biosynthetic process","termid":"GO:0019370"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"leukotriene D4 metabolic process","termid":"GO:1901748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790","GO:0006629"],"is_obsolete":false,"name":"leukotriene D4 biosynthetic process","synonyms":[{"name":"leukotriene D4 anabolism","type":"exact"},{"name":"leukotriene D4 biosynthesis","type":"exact"},{"name":"leukotriene D4 formation","type":"exact"},{"name":"leukotriene D4 synthesis","type":"exact"}],"termid":"GO:1901750"}


id: MONDO:0032673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral striopallidodentate calcinosis","termid":"MONDO:0008947"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"basal ganglia calcification, idiopathic, 7, autosomal recessive","secondary_identifiers":["MEDGEN:1683911","OMIM:618317","UMLS:C5193025"],"synonyms":[{"name":"BASAL GANGLIA CALCIFICATION, IDIOPATHIC, 7, AUTOSOMAL RECESSIVE","type":"related"},{"name":"IBGC7","type":"related"}],"termid":"MONDO:0032673","xrefs":{"Monarch":{"xref_id":"0032673"}}}


id: GO:1990769
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of an axon or dendrite that is close to the neuronal cell body.","definition_xrefs":["PMID:21104189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"proximal neuron projection","termid":"GO:1990769"}


id: PBO:0050149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 5","termid":"PBO:0050149"}


id: PBO:0072009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 11","termid":"PBO:0072009"}


id: PR:Q9UTN2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ath2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTN2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C139.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.01c","synonyms":[{"name":"Spom972h-ath2","type":"exact"}],"termid":"PR:Q9UTN2"}


id: PR:Q9Y7J1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7J1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.04","synonyms":[{"name":"Spom972h-spo6","type":"exact"}],"termid":"PR:Q9Y7J1"}


id: MOD:01520
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A distinct molecular entity produced as the result of a fragmentation process performed on a particular modified residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reporter fragment","termid":"MOD:01519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modification reporter fragment","termid":"MOD:01520"}


id: FYPO:0008384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin localization at the nuclear periphery is decreased.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome region phenotype during vegetative growth","termid":"FYPO:0008382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"decreased localization of chromatin region to nuclear periphery during vegetative growth","termid":"FYPO:0008384"}


id: PBO:0072076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 6","termid":"PBO:0072076"}


id: GO:0015449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete type IV protein (DNA-protein) secretor activity (obsolete GO:0015449)","synonyms":[{"name":"type IV protein (DNA-protein) secretor activity","type":"exact"}],"termid":"GO:0015449"}


id: MONDO:0968991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary central precocious puberty in male","termid":"MONDO:0958356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-genetic central precocious puberty in male","secondary_identifiers":["Orphanet:650102","UMLS:C5816759","MEDGEN:1853153"],"termid":"MONDO:0968991","xrefs":{"Monarch":{"xref_id":"0968991"}}}


id: MONDO:0021086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the upper or lower gingiva.","definition_xrefs":["NCIT:C3057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingival disorder","termid":"MONDO:0002021"},{"relation_name":"is_a","term_name":"odontogenic neoplasm","termid":"MONDO:0021192"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gingival neoplasm","secondary_identifiers":["UMLS:C0017570","MEDGEN:6605","SCTID:126792007"],"synonyms":[{"name":"gingiva neoplasm","type":"exact"},{"name":"gingiva neoplasm (disease)","type":"exact"},{"name":"gingiva tumor","type":"exact"},{"name":"gingiva tumour","type":"exact"},{"name":"gingival neoplasm","type":"exact"},{"name":"gingival tumor","type":"exact"},{"name":"gingival tumour","type":"exact"},{"name":"gum neoplasm","type":"exact"},{"name":"gum tumor","type":"exact"},{"name":"gum tumour","type":"exact"},{"name":"neoplasm of gingiva","type":"exact"},{"name":"neoplasm of gum","type":"exact"},{"name":"neoplasm of the gingiva","type":"exact"},{"name":"neoplasm of the gum","type":"exact"},{"name":"tumor of gingiva","type":"exact"},{"name":"tumor of gum","type":"exact"},{"name":"tumor of the gingiva","type":"exact"},{"name":"tumor of the gum","type":"exact"},{"name":"tumour of gingiva","type":"exact"},{"name":"tumour of gum","type":"exact"},{"name":"tumour of the gingiva","type":"exact"},{"name":"tumour of the gum","type":"exact"}],"termid":"MONDO:0021086","xrefs":{"Monarch":{"xref_id":"0021086"}}}


id: GO:1905366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intralumenal vesicle formation.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:PARL","PMID:26911690","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"negative regulation of endosome organization","termid":"GO:1904979"},{"relation_name":"is_a","term_name":"regulation of intralumenal vesicle formation","termid":"GO:1905365"},{"relation_name":"negatively_regulates","term_name":"intralumenal vesicle formation","termid":"GO:0070676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intralumenal vesicle formation","synonyms":[{"name":"down regulation of endosome membrane budding","type":"exact"},{"name":"down regulation of intralumenal vesicle formation","type":"exact"},{"name":"down-regulation of endosome membrane budding","type":"exact"},{"name":"down-regulation of intralumenal vesicle formation","type":"exact"},{"name":"downregulation of endosome membrane budding","type":"exact"},{"name":"downregulation of intralumenal vesicle formation","type":"exact"},{"name":"inhibition of endosome membrane budding","type":"narrow"},{"name":"inhibition of intralumenal vesicle formation","type":"narrow"},{"name":"negative regulation of endosome membrane budding","type":"exact"}],"termid":"GO:1905366"}


id: GO:0015311
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + monoamine(in) = H+(in) + monoamine(out).","definition_xrefs":["TC:2.A.1.2.11","TC:2.A.1.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoamine transmembrane transporter activity","termid":"GO:0008504"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"monoamine:proton antiporter activity","synonyms":[{"name":"monoamine:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015311"}


id: MONDO:0016060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A laryngo-tracheo-esophageal cleft (LC) is a congenital malformation characterized by an abnormal, posterior, sagittal communication between the larynx and the pharynx, possibly extending downward between the trachea and the esophagus.","definition_xrefs":["Orphanet:2004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal disorder","termid":"MONDO:0002567"},{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft","secondary_identifiers":["NCIT:C98622","icd11.foundation:271795917","SCTID:232461002","GARD:3188","MESH:C537875"],"synonyms":[{"name":"LC","type":"exact"},{"name":"LTEC","type":"exact"},{"name":"Larnygeotracheoesophageal cleft","type":"exact"},{"name":"congenital cleft larynx","type":"exact"},{"name":"laryngeal cleft","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft","type":"exact"},{"name":"laryngo-tracheo-esophageal diastema","type":"exact"},{"name":"tracheal cleft","type":"exact"}],"termid":"MONDO:0016060","xrefs":{"Monarch":{"xref_id":"0016060"}}}


id: GO:2000980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inner ear receptor cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mechanoreceptor differentiation","termid":"GO:0045631"},{"relation_name":"regulates","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inner ear receptor cell differentiation","synonyms":[{"name":"regulation of inner ear hair cell differentiation","type":"exact"}],"termid":"GO:2000980"}


id: PATO:0001491
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A paedomorphic growth quality which is due to a reduced rate.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paedomorphic growth","termid":"PATO:0001749"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neotenous growth","synonyms":[{"name":"neotenic growth","type":"exact"}],"termid":"PATO:0001491"}


id: MONDO:1012806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive retinal atrophy that occurs in dogs due to a mutation in the NECAP1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, NECAP1-related, dog","secondary_identifiers":["OMIA:002198-9615"],"termid":"MONDO:1012806","xrefs":{"Monarch":{"xref_id":"1012806"}}}


id: GO:0002592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation","termid":"GO:0002577"},{"relation_name":"regulates","term_name":"antigen processing and presentation via MHC class Ib","termid":"GO:0002475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002592"}


id: SO:0001963
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified cytosine DNA base feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_DNA_base","termid":"SO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_cytosine","termid":"SO:0001963"}


id: GO:0097479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a synaptic vesicle or vesicles are transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle localization","termid":"GO:0051648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"synaptic vesicle localization","synonyms":[{"name":"establishment and maintenance of synaptic vesicle localization","type":"exact"},{"name":"establishment and maintenance of synaptic vesicle position","type":"exact"},{"name":"synaptic vesicle localisation","type":"exact"}],"termid":"GO:0097479"}


id: PBO:0116783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"winged helix repair factor 1","termid":"PBO:0116783"}


id: MONDO:1012700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary connective tissue disorder characterized by extensive fibrosis of the skin and joints that occurs in dogs due to a mutation in the ADAMTSL2 gene.","definition_xrefs":["PMID:28158899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geleophysic dysplasia, ADMATSL2-related, dog","secondary_identifiers":["OMIA:001509-9615"],"synonyms":[{"name":"Chinese beagle syndrome, dog","type":"related"},{"name":"Musladin-Lueke syndrome","type":"exact"}],"termid":"MONDO:1012700","xrefs":{"Monarch":{"xref_id":"1012700"}}}


id: PBO:0041201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUD31 homolog pseudogene 1","termid":"PBO:0041201"}


id: GO:0034287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a monosaccharide is received and converted into a molecular signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of carbohydrate stimulus","termid":"GO:0009730"},{"relation_name":"is_a","term_name":"response to monosaccharide","termid":"GO:0034284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of monosaccharide stimulus","synonyms":[{"name":"perception of monosaccharide stimulus","type":"related"}],"termid":"GO:0034287"}


id: PBO:0043682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortistatin","termid":"PBO:0043682"}


id: PBO:0058829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8059","termid":"PBO:0058829"}


id: PBO:0070405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A1","termid":"PBO:0070405"}


id: PBO:0079998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 36","termid":"PBO:0079998"}


id: PBO:0005377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein Rxt3","termid":"PBO:0005377"}


id: PATO:0001173
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001173 urine glucose composition value (obsolete PATO:0001173)","termid":"PATO:0001173"}


id: MONDO:0000730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pontocerebellar hypoplasia (obsolete MONDO:0000730)","termid":"MONDO:0000730","xrefs":{"Monarch":{"xref_id":"0000730"}}}


id: FYPO:0008259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is decreased, and the localizatiion to the endosomal structure is increased. The cell surface refers to the external part of the cell wall and/or plasma membrane.","definition_xrefs":["PMID:22848669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell surface","termid":"FYPO:0008258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell surface with increased localization to endosomal structures","termid":"FYPO:0008259"}


id: PBO:0029322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_centromeric_tDNA_during_mitotic_S_phase","termid":"PBO:0029322"}


id: MONDO:0002236
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm affecting the structures of the eye.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory system cancer","termid":"MONDO:0000649"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"ocular cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:239.89","SCTID:371486001","NCIT:C4767","MESH:D005134","UMLS:C0496836","MEDGEN:105418","ICD9:190.8","DOID:2174"],"synonyms":[{"name":"cancer of eye","type":"exact"},{"name":"cancer of eyeball of camera-type eye","type":"exact"},{"name":"cancer of the eye","type":"exact"},{"name":"eye cancer","type":"exact"},{"name":"eye neoplasm","type":"broad"},{"name":"eye neoplasm, malignant","type":"exact"},{"name":"eyeball of camera-type eye cancer","type":"exact"},{"name":"malignant eye neoplasm","type":"exact"},{"name":"malignant eye tumor","type":"exact"},{"name":"malignant eye tumour","type":"exact"},{"name":"malignant eyeball of camera-type eye neoplasm","type":"exact"},{"name":"malignant neoplasm of eye","type":"exact"},{"name":"malignant neoplasm of eyeball of camera-type eye","type":"exact"},{"name":"malignant neoplasm of the eye","type":"exact"},{"name":"malignant ocular neoplasm","type":"exact"},{"name":"malignant ocular tumor","type":"exact"},{"name":"malignant ocular tumour","type":"exact"},{"name":"malignant tumor of eye","type":"exact"},{"name":"malignant tumor of the eye","type":"exact"},{"name":"malignant tumour of eye","type":"exact"},{"name":"malignant tumour of the eye","type":"exact"},{"name":"neoplasm of eye","type":"broad"},{"name":"neoplasm of eye proper","type":"related"},{"name":"ocular tumor","type":"broad"},{"name":"ocular tumour","type":"broad"}],"termid":"MONDO:0002236","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0002236"}}}


id: MONDO:1012841
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy that occurs in sheep due to a mutation in the TNNT1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, sheep","termid":"MONDO:1010913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, TNNT1-related, sheep","secondary_identifiers":["OMIA:002285-9940"],"synonyms":[{"name":"OCPMD","type":"exact"},{"name":"ovine congenital progressive muscular dystrophy","type":"related"}],"termid":"MONDO:1012841","xrefs":{"Monarch":{"xref_id":"1012841"}}}


id: FYPO:0007232
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of the initiation of mitotic DNA replication from early-firing origins is abnormal.","definition_xrefs":["PMID:22279046","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic DNA replication initiation","termid":"FYPO:0001248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal regulation of mitotic DNA replication initiation from early origin","synonyms":[{"name":"abnormal regulation of DNA replication initiation from early origin during mitotic cell cycle","type":"related"},{"name":"abnormal regulation of early origin firing timing","type":"related"},{"name":"abnormal regulation of mitotic DNA replication initiation at early origin","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from early origin during vegetative growth","type":"exact"},{"name":"abnormal regulation of mitotic DNA replication initiation from early replication origin","type":"exact"}],"termid":"FYPO:0007232"}


id: PBO:0060348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin XVI","termid":"PBO:0060348"}


id: PBO:0035752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0035752"}


id: PBO:0069579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 853, pseudogene","termid":"PBO:0069579"}


id: PBO:0038749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 1A","termid":"PBO:0038749"}


id: PBO:0049236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 7","termid":"PBO:0049236"}


id: MONDO:0006863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infiltrating malignant soft tissue neoplasm characterized by the presence of immature undifferentiated cells and abundant myxoid stroma formation.","definition_xrefs":["NCIT:C3255"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete connective tissue cancer (obsolete MONDO:0002176)","termid":"MONDO:0002176"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"myxosarcoma","secondary_identifiers":["MESH:D009236","DOID:4136","ICDO:8840/3","EFO:1001056","UMLS:C0027155","MEDGEN:6508"],"synonyms":[{"name":"myxosarcoma","type":"exact"},{"name":"myxosarcoma (morphologic abnormality)","type":"exact"},{"name":"myxosarcoma, malignant","type":"exact"}],"termid":"MONDO:0006863","xrefs":{"Monarch":{"xref_id":"0006863"}}}


id: MONDO:0008828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camptodactyly-arthropathy-coxa-vara-pericarditis (CACP) syndrome is a rare, genetic, rheumatologic disease characterized by congenital or early-onset camptodactyly and symmetrical, polyarticular, non-inflammatory, large joint arthropathy with synovial hyperplasia, as well as progressive coxa vara deformity and, occasionally, non-inflammatory pericarditis.","definition_xrefs":["Orphanet:2848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"camptodactyly-arthropathy-coxa vara-pericarditis syndrome","secondary_identifiers":["UMLS:C1859690","GARD:306","MESH:C537560","OMIM:208250","DOID:0090127","EFO:0009028","MEDGEN:349226"],"synonyms":[{"name":"CACP","type":"exact"},{"name":"CACP syndrome","type":"exact"},{"name":"Jacobs syndrome","type":"exact"},{"name":"PAC syndrome","type":"exact"},{"name":"arthropathy camptodactyly syndrome","type":"related"},{"name":"arthropathy-camptodactyly syndrome","type":"exact"},{"name":"camptodactyly arthropathy coxa vara pericarditis syndrome","type":"related"},{"name":"camptodactyly arthropathy pericarditis syndrome","type":"related"},{"name":"camptodactyly-arthropathy-coxa vara-pericarditis syndrome","type":"exact"},{"name":"camptodactyly-arthropathy-coxa-vara-pericarditis syndrome","type":"related"},{"name":"camptodactyly-arthropathy-pericarditis syndrome","type":"exact"},{"name":"congenital familial hypertrophic synovitis","type":"exact"},{"name":"familial fibrosing serositis","type":"exact"},{"name":"fibrosing serositis, familial","type":"related"},{"name":"hypertrophic synovitis, congenital familial","type":"related"},{"name":"pericarditis arthropathy camptodactyly syndrome","type":"related"},{"name":"pericarditis-arthropathy-camptodactyly syndrome","type":"exact"}],"termid":"MONDO:0008828","xrefs":{"Monarch":{"xref_id":"0008828"}}}


id: PBO:0064856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14D","termid":"PBO:0064856"}


id: PBO:0076985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 3","termid":"PBO:0076985"}


id: GO:1902809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle fiber differentiation.","definition_xrefs":["GOC:mr","GO_REF:0000058","GOC:TermGenie","PMID:17879321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myotube differentiation","termid":"GO:0010830"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle cell differentiation","termid":"GO:2001014"},{"relation_name":"regulates","term_name":"skeletal muscle fiber differentiation","termid":"GO:0098528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle fiber differentiation","termid":"GO:1902809"}


id: GO:0044427
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a chromosome, a structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete chromosomal part (obsolete GO:0044427)","synonyms":[{"name":"chromosomal component","type":"exact"},{"name":"chromosome component","type":"exact"},{"name":"chromosome part","type":"exact"}],"termid":"GO:0044427"}


id: MOD:00642
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of a residue with 4-hydroxynonenal artificially reduced by a reagent such as NaBH4.","definition_xrefs":["PubMed:15133838","Unimod:335","PubMed:11910026"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"4-hydroxynonenal adduct","termid":"MOD:00446"},{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"reduced 4-hydroxynonenal adduct","synonyms":[{"name":"HNE+Delta:H(2)","type":"related"},{"name":"reduced 4-Hydroxynonenal","type":"related"}],"termid":"MOD:00642"}


id: PBO:0069855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1141, pseudogene","termid":"PBO:0069855"}


id: PBO:0057676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1267","termid":"PBO:0057676"}


id: PBO:0017028
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by rat Mark2","termid":"PBO:0017028"}


id: PBO:0113754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu18, C2 domain","termid":"PBO:0113754"}


id: GO:0017084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H+ + L-glutamate + NADPH = ADP + L-glutamate 5-semialdehyde + NADP+ + phosphate.","definition_xrefs":["RHEA:33207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"delta1-pyrroline-5-carboxylate synthetase activity","secondary_identifiers":["Reactome:R-HSA-508040"],"synonyms":[{"name":"D1-pyrroline-5-carboxylate synthetase activity","type":"exact"}],"termid":"GO:0017084"}


id: PBO:0076584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1D8 antisense RNA 1","termid":"PBO:0076584"}


id: PBO:0028998
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_proline_nitrogen_source","termid":"PBO:0028998"}


id: MONDO:0011897
data:
  {"annotated_genes":["SJAG_04934","SJAG_00637"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86510,86511],"is_not":false,"summary":null,"term":"MONDO:0011897"}]},"cv_name":"mondo","definition":"A hypomyelinating leukodystrophy characterized by autosomal recessive inheritance of childhood onset of progressive motor decline manifest as spasticity, ataxia, tremor, and cerebellar signs, as well as mild cognitive regression that has material basis in homozygous or compound heterozygous mutation in the POLR3A gene on chromosome 10q22.","definition_xrefs":["DOID:0060794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"POLR3A-related disorder","termid":"MONDO:0700276"},{"relation_name":"is_a","term_name":"POLR3-related leukodystrophy","termid":"MONDO:0700282"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_04934":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 7, with or without oligodontia and/or hypogonadotropic hypogonadism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200585","NANDO:2201297","OMIM:607694","GARD:16948","SCTID:721846006","UMLS:C4706676","MEDGEN:1639554"],"synonyms":[{"name":"4H syndrome","type":"exact"},{"name":"HLD7","type":"exact"},{"name":"ataxia-delayed dentition-hypomyelination syndrome; odontoleukodystrophy","type":"exact"},{"name":"hypomyelinating leukodystrophy 7 with or without oligodontia and-or hypogonadotropic hypogonadism","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 7, with or without oligodontia and/or hypogonadotropic hypogonadism","type":"exact"},{"name":"leukodystrophy, hypomyelinating, with hypodontia and hypogonadotropic hypogonadism","type":"exact"},{"name":"leukoencephalopathy, hypomyelinating, with ataxia and delayed dentition","type":"exact"},{"name":"leukoencephalopathy-ataxia-hypodontia-hypomyelination syndrome","type":"exact"}],"termid":"MONDO:0011897","terms_by_termid":{"MONDO:0011897":null},"xrefs":{"Monarch":{"xref_id":"0011897"}}}


id: GO:0030691
data:
  {"annotated_genes":["SJAG_01494","SJAG_00311","SJAG_04346"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73250,80480,112818],"is_not":false,"summary":null,"term":"GO:0030691"}]},"cv_name":"cellular_component","definition":"A heterodimer associated with 66S preribosomes; predominantly nucleoplasmic, but also locates to the nucleolus; involved in ribosomal large subunit biogenesis.","definition_xrefs":["PMID:12446671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noc complex","termid":"GO:0030689"},{"relation_name":"part_of","term_name":"preribosome, large subunit precursor","termid":"GO:0030687"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00311":null,"SJAG_01494":null,"SJAG_04346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575","GO:0030684"],"is_obsolete":false,"name":"Noc2p-Noc3p complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030691","terms_by_termid":{"GO:0030691":null}}


id: PBO:0047801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box J1","termid":"PBO:0047801"}


id: GO:0051441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the rate of ubiquitin ligase activity during the meiotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ai","PMID:10871297","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ubiquitin-protein ligase activity involved in meiotic cell cycle (obsolete GO:0051441)","synonyms":[{"name":"APC activation during meiotic cell cycle","type":"related"},{"name":"activation of anaphase-promoting complex activity during meiotic cell cycle","type":"related"},{"name":"activation of anaphase-promoting complex activity involved in meiotic cell cycle","type":"narrow"},{"name":"activation of ubiquitin ligase activity during meiotic cell cycle","type":"narrow"},{"name":"activation of ubiquitin ligase activity of APC during meiotic cell cycle","type":"related"},{"name":"activation of ubiquitin ligase activity of anaphase promoting complex during meiotic cell cycle","type":"related"},{"name":"activation of ubiquitin ligase activity of anaphase-promoting complex during meiotic cell cycle","type":"related"},{"name":"anaphase promoting complex activation during meiotic cell cycle","type":"related"},{"name":"anaphase-promoting complex activation during meiotic cell cycle","type":"related"},{"name":"meiotic APC activation","type":"exact"},{"name":"meiotic APC activator","type":"narrow"},{"name":"meiotic SCF complex activator","type":"narrow"},{"name":"meiotic anaphase promoting complex activation","type":"related"},{"name":"meiotic anaphase promoting complex activator","type":"narrow"},{"name":"meiotic anaphase-promoting complex activator","type":"narrow"},{"name":"meiotic ubiquitin ligase activator","type":"narrow"},{"name":"positive regulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"},{"name":"positive regulation of ubiquitin-protein ligase activity during meiotic cell cycle","type":"related"},{"name":"stimulation of ubiquitin ligase activity during meiotic cell cycle","type":"narrow"},{"name":"up regulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"},{"name":"up-regulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"},{"name":"upregulation of ubiquitin ligase activity during meiotic cell cycle","type":"related"}],"termid":"GO:0051441"}


id: PBO:0089530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase Lcb2","termid":"PBO:0089530"}


id: PBO:0054182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1556","termid":"PBO:0054182"}


id: PBO:0057560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 711","termid":"PBO:0057560"}


id: PBO:0047698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLYWCH-type zinc finger 1 pseudogene 1","termid":"PBO:0047698"}


id: MONDO:0003486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma characterized by the presence of cells with hyperchromatic nuclei, scant amount of cytoplasm, and peripheral nuclear palisading.","definition_xrefs":["NCIT:C54244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"basaloid carcinoma","termid":"MONDO:0006102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"basaloid squamous cell carcinoma","secondary_identifiers":["UMLS:C1266005","icd11.foundation:1738201981","DOID:5522","EFO:1001940","ICDO:8083/3","MEDGEN:266085"],"synonyms":[{"name":"basaloid carcinoma","type":"broad"},{"name":"basaloid carcinoma (morphologic abnormality)","type":"broad"},{"name":"basaloid squamous cell carcinoma","type":"exact"},{"name":"basaloid squamous cell carcinoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003486","xrefs":{"Monarch":{"xref_id":"0003486"}}}


id: PBO:0044165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine gamma-lyase","termid":"PBO:0044165"}


id: GO:0071401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a triglyceride stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to triglyceride","termid":"GO:0034014"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to triglyceride","synonyms":[{"name":"cellular response to triacylglyceride","type":"exact"},{"name":"cellular response to triacylglycerol","type":"exact"}],"termid":"GO:0071401"}


id: FYPO:0001479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal alpha,alpha-trehalase activity","synonyms":[{"name":"abnormal neutral trehalase activity","type":"exact"},{"name":"abnormal trehalase activity","type":"broad"}],"termid":"FYPO:0001479"}


id: PBO:0004770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit Ctf1","termid":"PBO:0004770"}


id: MONDO:0060768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic nodular lesion that arises from the gingiva. It is composed of epithelial cells lining connective tissue stroma.","definition_xrefs":["NCIT:C4693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epulis","termid":"MONDO:0003396"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gingival fibroepithelial polyp","secondary_identifiers":["MEDGEN:98314","SCTID:235001002","icd11.foundation:1520492305","UMLS:C0399441"],"synonyms":[{"name":"fibroepithelial polyp of gingiva","type":"exact"},{"name":"fibroepithelial polyp of gum","type":"exact"},{"name":"fibroepithelial polyp of the gingiva","type":"exact"},{"name":"fibroepithelial polyp of the gum","type":"exact"},{"name":"gingival fibroepithelial polyp","type":"exact"},{"name":"gum fibroepithelial polyp","type":"exact"}],"termid":"MONDO:0060768","xrefs":{"Monarch":{"xref_id":"0060768"}}}


id: MONDO:0045014
data:
  {"annotated_genes":["SJAG_03098","SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012994"},{"annotations":[85395],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007495"},{"annotations":[85756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100186"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of tetrahydrobiopterin metabolic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of phenylalanine metabolism","termid":"MONDO:0017306"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03098":null,"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"tetrahydrobiopterin metabolic process disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:237913008","MEDGEN:575174","UMLS:C0342676"],"synonyms":[{"name":"disorder of tetrahydrobiopterin metabolic process","type":"exact"},{"name":"disorder of tetrahydrobiopterin metabolism","type":"exact"},{"name":"tetrahydrobiopterin metabolism disease","type":"exact"}],"termid":"MONDO:0045014","terms_by_termid":{"MONDO:0007495":null,"MONDO:0012994":null,"MONDO:0100186":null},"xrefs":{"Monarch":{"xref_id":"0045014"}}}


id: GO:1900979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tatiopterin metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphorus metabolic process","termid":"GO:0010562"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of tatiopterin metabolic process","termid":"GO:1900977"},{"relation_name":"positively_regulates","term_name":"tatiopterin metabolic process","termid":"GO:1900869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of tatiopterin metabolic process","synonyms":[{"name":"activation of tatiopterin metabolic process","type":"narrow"},{"name":"activation of tatiopterin metabolism","type":"exact"},{"name":"positive regulation of tatiopterin metabolism","type":"exact"},{"name":"up regulation of tatiopterin metabolic process","type":"exact"},{"name":"up regulation of tatiopterin metabolism","type":"exact"},{"name":"up-regulation of tatiopterin metabolic process","type":"exact"},{"name":"up-regulation of tatiopterin metabolism","type":"exact"},{"name":"upregulation of tatiopterin metabolic process","type":"exact"},{"name":"upregulation of tatiopterin metabolism","type":"exact"}],"termid":"GO:1900979"}


id: PBO:0043478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canopy FGF signaling regulator 1","termid":"PBO:0043478"}


id: MONDO:0021374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a cerebral hemisphere.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of cerebral hemisphere","secondary_identifiers":["UMLS:C1263885","NCIT:C4874","MEDGEN:224729","SCTID:126953009"],"synonyms":[{"name":"cerebral hemisphere neoplasm","type":"exact"},{"name":"cerebral hemisphere tumor","type":"exact"},{"name":"cerebral hemisphere tumour","type":"exact"},{"name":"cerebral hemispheric neoplasm","type":"exact"},{"name":"cerebral hemispheric tumor","type":"exact"},{"name":"cerebral hemispheric tumour","type":"exact"},{"name":"cerebral neoplasm","type":"exact"},{"name":"cerebral neoplasms","type":"exact"},{"name":"cerebral tumor","type":"exact"},{"name":"cerebral tumour","type":"exact"},{"name":"neoplasm of cerebral hemisphere","type":"exact"},{"name":"neoplasm of cerebral hemispheres","type":"exact"},{"name":"neoplasm of cerebrum","type":"exact"},{"name":"neoplasm of telencephalon","type":"exact"},{"name":"neoplasm of the cerebral hemispheres","type":"exact"},{"name":"neoplasm of the cerebrum","type":"exact"},{"name":"telencephalon neoplasm (disease)","type":"exact"},{"name":"telencephalon tumor","type":"exact"},{"name":"telencephalon tumour","type":"exact"},{"name":"tumor of cerebral hemisphere","type":"exact"},{"name":"tumor of cerebral hemispheres","type":"exact"},{"name":"tumor of cerebrum","type":"exact"},{"name":"tumor of telencephalon","type":"exact"},{"name":"tumor of the cerebral hemispheres","type":"exact"},{"name":"tumor of the cerebrum","type":"exact"},{"name":"tumour of cerebral hemisphere","type":"exact"},{"name":"tumour of cerebral hemispheres","type":"exact"},{"name":"tumour of cerebrum","type":"exact"},{"name":"tumour of telencephalon","type":"exact"},{"name":"tumour of the cerebral hemispheres","type":"exact"},{"name":"tumour of the cerebrum","type":"exact"}],"termid":"MONDO:0021374","xrefs":{"Monarch":{"xref_id":"0021374"}}}


id: PBO:0040461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP13A3 divergent transcript","termid":"PBO:0040461"}


id: PR:O43027
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rga6 gene.","definition_xrefs":["UniProtKB:O43027","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-GTPase-activating protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.13","synonyms":[{"name":"Spom972h-rga6","type":"exact"}],"termid":"PR:O43027"}


id: SO:0001023
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An allele is one of a set of coexisting sequence variants of a gene.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_collection","termid":"SO:0001507"},{"relation_name":"variant_of","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allele","secondary_identifiers":["http://en.wikipedia.org/wiki/Allele"],"synonyms":[{"name":"allelomorph","type":"exact"}],"termid":"SO:0001023"}


id: PBO:0060421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylated alpha-linked acidic dipeptidase like 2","termid":"PBO:0060421"}


id: FYPO:0001835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium that is more acidic than standard fission yeast media (about 5.8).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0000257","FYPO:0002060","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on acidic medium","synonyms":[{"name":"normal cell population growth on acidic medium","type":"exact"},{"name":"normal cellular response to acidity","type":"related"},{"name":"normal vegetative cell population growth on acidic medium","type":"exact"}],"termid":"FYPO:0001835"}


id: PBO:0047382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 16","termid":"PBO:0047382"}


id: GO:0002867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell tolerance induction","termid":"GO:0002661"},{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in development","termid":"GO:1904748"},{"relation_name":"regulates","term_name":"B cell deletion","termid":"GO:0002516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell deletion","synonyms":[{"name":"regulation of B lymphocyte deletion","type":"exact"},{"name":"regulation of B-cell deletion","type":"exact"},{"name":"regulation of B-lymphocyte deletion","type":"exact"}],"termid":"GO:0002867"}


id: PBO:0073286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 7","termid":"PBO:0073286"}


id: GO:0034351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of glial cell apoptotic process.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell apoptotic process","termid":"GO:0034350"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"negatively_regulates","term_name":"glial cell apoptotic process","termid":"GO:0034349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glial cell apoptotic process","synonyms":[{"name":"down regulation of glial cell apoptosis","type":"exact"},{"name":"down-regulation of glial cell apoptosis","type":"exact"},{"name":"downregulation of glial cell apoptosis","type":"exact"},{"name":"inhibition of glial cell apoptosis","type":"narrow"},{"name":"negative regulation of glial cell apoptosis","type":"narrow"}],"termid":"GO:0034351"}


id: MONDO:0013622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited bleeding disorder, platelet-type in which the cause of the disease is a mutation in the ITGA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 9","secondary_identifiers":["MEDGEN:481744","Orphanet:98886","GARD:16868","OMIM:614200","UMLS:C3280114","DOID:0111045","MESH:C566000"],"synonyms":[{"name":"BDPLT9","type":"exact"},{"name":"GP Ia deficiency","type":"exact"},{"name":"ITGA2 inherited bleeding disorder, platelet-type","type":"exact"},{"name":"bleeding diathesis due to integrin alpha2-beta1 deficiency","type":"related"},{"name":"bleeding disorder, platelet-type, 9","type":"related"},{"name":"collagen platelet receptor deficiency","type":"exact"},{"name":"glycoprotein Ia deficiency","type":"exact"},{"name":"inherited bleeding disorder, platelet-type caused by mutation in ITGA2","type":"exact"}],"termid":"MONDO:0013622","xrefs":{"Monarch":{"xref_id":"0013622"}}}


id: GO:0001217
data:
  {"annotated_genes":["SJAG_04584","SJAG_03473","SJAG_00987","SJAG_02730","SJAG_04813","SJAG_00792","SJAG_05343","SJAG_04009","SJAG_02898","SJAG_02048","SJAG_00124"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93630,80770,95061,94393,106617,104793,104801,111263,116463,109179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001227"},{"annotations":[96729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106250"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that represses or decreases the transcription of specific gene sets.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity","termid":"GO:0003700"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00792":null,"SJAG_00987":null,"SJAG_02048":null,"SJAG_02730":null,"SJAG_02898":null,"SJAG_03473":null,"SJAG_04009":null,"SJAG_04584":null,"SJAG_04813":null,"SJAG_05343":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003700"}],"interesting_parent_ids":["GO:0003674","GO:0003700","GO:0140110"],"is_obsolete":false,"name":"DNA-binding transcription repressor activity","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001220","GO:0001141","GO:0001219","GO:0001218"],"synonyms":[{"name":"bacterial-type DNA binding transcription repressor activity","type":"narrow"},{"name":"bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, cadmium ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, copper ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, metal ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, sequence-specific DNA binding","type":"narrow"},{"name":"cadmium ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"copper ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"transcriptional repressor activity, bacterial-type RNA polymerase core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"transcriptional repressor activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding","type":"narrow"}],"termid":"GO:0001217","terms_by_termid":{"GO:0001227":null,"GO:0106250":null}}


id: MOD:01800
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an L-serine alpha amino hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"},{"relation_name":"is_a","term_name":"methylated serine","termid":"MOD:01799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated serine","termid":"MOD:01800"}


id: GO:0030094
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located in the plasma membrane-derived thylakoid. The photosystem functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin. Examples of this complex are found in bacterial species.","definition_xrefs":["GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem I","termid":"GO:0009522"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"bacterial thylakoid","termid":"GO:0030075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"plasma membrane-derived photosystem I","synonyms":[{"name":"plasma membrane photosystem I","type":"exact"}],"termid":"GO:0030094"}


id: GO:0036155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of an acylglycerol, through sequential deacylation and re-acylation reactions, to generate an acylglycerol containing different types of fatty acid acyl chains.","definition_xrefs":["GOC:mw","PMID:15364929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"acylglycerol acyl-chain remodeling","secondary_identifiers":["Reactome:R-HSA-1482883"],"synonyms":[{"name":"acylglycerol acyl-chain remodelling","type":"exact"},{"name":"glyceride acyl-chain remodeling","type":"exact"}],"termid":"GO:0036155"}


id: PBO:0074205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC39A13 antisense RNA 1","termid":"PBO:0074205"}


id: GO:0005610
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha3, beta3 and gamma2 polypeptide chains.","definition_xrefs":["PMID:10842354","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-5 complex","synonyms":[{"name":"laminin-332 complex","type":"narrow"},{"name":"laminin-3A32 complex","type":"exact"},{"name":"laminin-5A complex","type":"exact"}],"termid":"GO:0005610"}


id: MONDO:0001855
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"rubeosis iridis","secondary_identifiers":["SCTID:51995000","ICD9:364.42","UMLS:C0154916","MEDGEN:488789","DOID:14000"],"termid":"MONDO:0001855","xrefs":{"Monarch":{"xref_id":"0001855"}}}


id: FYPO:0004738
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119527],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[120039,119742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[119781],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[119749,119730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[119528],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin contractile ring organization is abnormal. The process normally results in the assembly, arrangement of constituent parts, or disassembly of the actomyosin contractile ring.","definition_xrefs":["PomBase:mah","GO:0044837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":6,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143","SJAG_04280","SJAG_04522"],"name":"abnormal actomyosin contractile ring organization","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_02392","SJAG_02592","SJAG_04522"],"single_locus_genotype_uniquenames":["mid1delta","rga4delta","sty1delta","pom1delta"],"synonyms":[{"name":"abnormal actomyosin contractile ring organisation","type":"exact"},{"name":"abnormal actomyosin contractile ring organization during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring organization during vegetative growth","type":"exact"},{"name":"abnormal contractile ring organization","type":"exact"},{"name":"abnormal mitotic contractile ring organization","type":"exact"}],"termid":"FYPO:0004738","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: SO:0001316
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"7-deazaguanosine is a modified guanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven_deazaguanosine","synonyms":[{"name":"7-deazaguanosine","type":"related"},{"name":"seven deazaguanosine","type":"exact"}],"termid":"SO:0001316"}


id: PR:Q09852
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23D3.12 gene.","definition_xrefs":["UniProtKB:Q09852","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate transporter C23D3.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.12","synonyms":[{"name":"Spom972h-SPAC23D3.12","type":"exact"}],"termid":"PR:Q09852"}


id: FYECO:0000162
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02409","name":"stc1delta","uniquename":"SJAG_02409:allele-1"},"SJAG_02594:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02594","name":"arb1delta","uniquename":"SJAG_02594:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02668:allele-1":{"allele_type":"amino_acid_mutation","description":"R77W","gene_uniquename":"SJAG_02668","name":"mpe1-R77W","uniquename":"SJAG_02668:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03118:allele-2":{"allele_type":"nonsense_mutation","description":"aa61->stop","gene_uniquename":"SJAG_03118","name":"frameshift","uniquename":"SJAG_03118:allele-2"},"SJAG_03356:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03356","name":"rdp1delta","uniquename":"SJAG_03356:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03916:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03916","name":"chp1delta","uniquename":"SJAG_03916:allele-1"},"SJAG_04061:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04061","name":"arb2delta","uniquename":"SJAG_04061:allele-1"},"SJAG_04574:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04574","name":"clr4delta","uniquename":"SJAG_04574:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[119942,119944,119931,119546,119870,119778,119934,119935,119936,119937,119547,119943,119945,119922,119923,119924,119925,119926,119927,119928,119938,119939,119543,119544,119545,119929,119871,119781,119932,119553,119711,119933],"is_not":false,"summary":null,"term":"FYECO:0000162"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing yeast extract and other components. The concentration of glucose is high (eg around 8%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01330":null,"SJAG_01745":null,"SJAG_02392":null,"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02668":null,"SJAG_02763":null,"SJAG_03118":null,"SJAG_03356":null,"SJAG_03449":null,"SJAG_03689":null,"SJAG_03916":null,"SJAG_04061":null,"SJAG_04574":null},"genotype_count":19,"genotypes_by_uniquename":{"ago1delta":{"display_name":"ago1delta","display_uniquename":"ago1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]}]},"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"arb1delta":{"display_name":"arb1delta","display_uniquename":"arb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02594:allele-1","expression":"Null"}]}]},"arb2delta":{"display_name":"arb2delta","display_uniquename":"arb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04061:allele-1","expression":"Null"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"chp1delta":{"display_name":"chp1delta","display_uniquename":"chp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03916:allele-1","expression":"Null"}]}]},"clr4delta":{"display_name":"clr4delta","display_uniquename":"clr4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]}]},"clr4delta__leo1delta":{"display_name":"clr4delta leo1delta","display_uniquename":"clr4delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__frameshift-aa61->stop-nonsense_mutation-expression-not_assayed_or_wild_type":{"display_name":"dcr1delta frameshift(aa61->stop)","display_uniquename":"dcr1delta__frameshift-aa61->stop-nonsense_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-2","expression":"Not assayed or wild type"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta__mpe1-R77W-R77W-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"dcr1delta mpe1-R77W(aa)","display_uniquename":"dcr1delta__mpe1-R77W-R77W-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02668:allele-1","expression":"Not assayed or wild type"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rdp1delta":{"display_name":"rdp1delta","display_uniquename":"rdp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03356:allele-1","expression":"Null"}]}]},"stc1delta":{"display_name":"stc1delta","display_uniquename":"stc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02409:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_04574","SJAG_02621","SJAG_02668","SJAG_03118"],"name":"high glucose YES","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03356","SJAG_03449","SJAG_01745","SJAG_04061","SJAG_03916","SJAG_03689","SJAG_01330","SJAG_02392","SJAG_04574","SJAG_02763","SJAG_02409","SJAG_00426","SJAG_02621","SJAG_02594"],"single_locus_genotype_uniquenames":["ned1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","arb2delta","arb1delta","lem2delta","rdp1delta","dcr1delta","man1delta","chp1delta","ago1delta","clr4delta","pom1delta","mad2delta","stc1delta"],"synonyms":[{"name":"high glucose rich medium","type":"related"}],"termid":"FYECO:0000162","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000162":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0033020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyclopentanol.","definition_xrefs":["GOC:mlg","PMID:12406764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cyclopentanol metabolic process","synonyms":[{"name":"cyclopentanol metabolism","type":"exact"}],"termid":"GO:0033020"}


id: PBO:0113256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pbp1p binding protein; interacts strongly with Pab1p-binding protein 1 (Pbp1p) in the yeast two-hybrid system; also interacts with Lsm12p in a copurification assay; relative distribution to the nucleus increases upon DNA replication stress; also detected in peroxisomes","termid":"PBO:0113256"}


id: GO:0034562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,2-bis(4-hydroxyphenyl)-1-propanol + NADH + H+ + O2 = 2,3-bis(4-hydroxyphenyl)-1,2-propanediol + NAD+ + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,2-bis(4-hydroxyphenyl)-1-propanol hydroxylase activity (obsolete GO:0034562)","termid":"GO:0034562"}


id: GO:1901401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tetrapyrrole metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"regulation of tetrapyrrole metabolic process","synonyms":[{"name":"regulation of tetrapyrrole metabolism","type":"exact"}],"termid":"GO:1901401"}


id: GO:0016606
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear body that is enriched in the lymphoid cell-specific protein LYSp100B; LANDs are globular, electron-dense structures and are morphologically distinct from the annular structures characteristic of PML bodies.","definition_xrefs":["PMID:10921892","PMID:8695863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body","termid":"GO:0016604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005654","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"LYSP100-associated nuclear domain","synonyms":[{"name":"LANDs","type":"exact"}],"termid":"GO:0016606"}


id: PBO:0027657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0027657"}


id: SO:0001021
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal region that may sustain a double-strand break, resulting in a recombination event.","direct_ancestors":[{"relation_name":"is_a","term_name":"junction","termid":"SO:0000699"},{"relation_name":"part_of","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome_breakpoint","secondary_identifiers":["SO:0001242"],"synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:chromosome_breakpoint","type":"exact"},{"name":"aberration breakpoint","type":"exact"},{"name":"aberration_junction","type":"exact"},{"name":"chromosome breakpoint","type":"exact"}],"termid":"SO:0001021"}


id: PATO:0001591
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface shape quality inhering in a bearer by virtue of the bearer's exhibiting a degree of bending.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curvature","termid":"PATO:0001591"}


id: GO:0070524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11-beta-hydroxysteroid + NADP+ = an 11-oxosteroid + NADPH + H+.","definition_xrefs":["PMID:16216911","RHEA:11388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"11-beta-hydroxysteroid dehydrogenase [NAD(P)+] activity","termid":"GO:0003845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"11-beta-hydroxysteroid dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.146","Reactome:R-HSA-9759259","MetaCyc:11-BETA-HYDROXYSTEROID-DEHYDROGENASE-RXN","Reactome:R-HSA-9757706","Wikipedia:11beta-hydroxysteroid_dehydrogenase"],"synonyms":[{"name":"beta-hydroxysteroid dehydrogenase","type":"broad"},{"name":"corticosteroid 11-beta-dehydrogenase activity","type":"related"}],"termid":"GO:0070524"}


id: PBO:0000177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR97","termid":"PBO:0000177"}


id: GO:0070448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + laricitrin = S-adenosyl-L-homocysteine + syringetin.","definition_xrefs":["RHEA:25633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"laricitrin 5'-O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06816","MetaCyc:RXN-8452"],"synonyms":[{"name":"CrCOMT2","type":"related"},{"name":"S-adenosyl-L-methionine:myricetin O-methyltransferase activity","type":"related"},{"name":"flavonoid 3',5'-O-dimethyltransferase activity","type":"related"}],"termid":"GO:0070448"}


id: PBO:0089370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-oxoprolinase (ATP-hydrolizing)","termid":"PBO:0089370"}


id: PBO:0111525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 5","termid":"PBO:0111525"}


id: PR:000050481
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A G2-specific protein kinase fin1 (Schizosaccharomyces pombe) that has been phosphorylated at the positions equivalent to Ser-377, Ser-526, and Ser-698 of the amino acid sequence represented by UniProtKB:O13839. Example: UniProtKB:O13839, Ser-377/Ser-526/Ser-698, MOD:00046.","definition_xrefs":["PomBase:VW","PMID:22684255","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G2-specific protein kinase fin1 (Schizosaccharomyces pombe)","termid":"PR:000050480"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fin1/Phos(S377,S526,S698)","pombase_gene_id":"SPAC19E9.02","synonyms":[{"name":"PomBase_original_PRO_term_name: G2-specific protein kinase fin1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-fin1/Phos:1","type":"exact"},{"name":"UniProtKB:O13839, Ser-377/Ser-526/Ser-698, MOD:00046","type":"narrow"},{"name":"fin1/Phos(S377,S526,S698)","type":"exact"}],"termid":"PR:000050481"}


id: GO:0018818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetaldehyde = acetylene + H2O.","definition_xrefs":["EC:4.2.1.112","RHEA:17885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetylene hydratase activity","secondary_identifiers":["UM-BBD_reactionID:r0591","KEGG_REACTION:R05380","MetaCyc:R141-RXN"],"synonyms":[{"name":"AH","type":"related"},{"name":"AHy","type":"related"},{"name":"acetaldehyde hydro-lyase activity","type":"related"}],"termid":"GO:0018818"}


id: FYPO:0003176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic chromosome segregation is normal (i.e. indistinguishable from wild type). Meiotic chromosome segregation is the entire process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets during M phase of the meiotic cell cycle.","definition_xrefs":["GO:0045132","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic chromosome segregation","termid":"FYPO:0003176"}


id: GO:0009871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by ethylene (ethene) involved in jasmonic acid/ethylene dependent systemic resistance.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethylene-activated signaling pathway","termid":"GO:0009873"},{"relation_name":"part_of","term_name":"jasmonic acid and ethylene-dependent systemic resistance","termid":"GO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway","synonyms":[{"name":"ethene mediated signaling pathway (jasmonic acid/ethene-dependent systemic resistance)","type":"exact"},{"name":"ethylene mediated signaling pathway (jasmonic acid/ethylene-dependent systemic resistance)","type":"exact"},{"name":"jasmonic acid and ethene-dependent systemic resistance, ethene mediated signaling pathway","type":"exact"},{"name":"jasmonic acid/ethene-dependent systemic resistance, ethene mediated signaling pathway","type":"exact"},{"name":"jasmonic acid/ethene-dependent systemic resistance, ethene mediated signalling pathway","type":"exact"},{"name":"jasmonic acid/ethylene-dependent systemic resistance, ethylene mediated signaling pathway","type":"exact"},{"name":"jasmonic acid/ethylene-dependent systemic resistance, ethylene mediated signalling pathway","type":"exact"}],"termid":"GO:0009871"}


id: PBO:0090893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,6-mannosyltransferase Och1","termid":"PBO:0090893"}


id: FYPO:0004953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the prospore membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000121"],"is_obsolete":false,"name":"abnormal prospore membrane","synonyms":[{"name":"abnormal forespore membrane","type":"exact"}],"termid":"FYPO:0004953"}


id: GO:1905297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neural crest cell fate specification.","definition_xrefs":["PMID:15073157","GOC:rl","GOC:BHF","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell fate specification","termid":"GO:0042660"},{"relation_name":"is_a","term_name":"positive regulation of neural crest formation","termid":"GO:0090300"},{"relation_name":"is_a","term_name":"positive regulation of neural crest cell differentiation","termid":"GO:1905294"},{"relation_name":"is_a","term_name":"regulation of neural crest cell fate specification","termid":"GO:1905295"},{"relation_name":"positively_regulates","term_name":"neural crest cell fate specification","termid":"GO:0014036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neural crest cell fate specification","synonyms":[{"name":"activation of neural crest cell fate specification","type":"narrow"},{"name":"up regulation of neural crest cell fate specification","type":"exact"},{"name":"up-regulation of neural crest cell fate specification","type":"exact"},{"name":"upregulation of neural crest cell fate specification","type":"exact"}],"termid":"GO:1905297"}


id: PBO:0049503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 10, pseudogene","termid":"PBO:0049503"}


id: GO:0090349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of organohalogen metabolic process","termid":"GO:0090347"},{"relation_name":"negatively_regulates","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of organohalogen metabolic process","termid":"GO:0090349"}


id: PBO:0031700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_fusion_during_mating","termid":"PBO:0031700"}


id: GO:0160126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A gated channel activity that enables the transmembrane transfer of a calcium ion by a channel that opens in response to a change in pH.","definition_xrefs":["PMID:30930064","PMID:34767445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated calcium channel activity","termid":"GO:0099604"},{"relation_name":"is_a","term_name":"pH-gated monoatomic ion channel activity","termid":"GO:0160128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"pH-gated calcium channel activity","synonyms":[{"name":"pH-dependent calcium channel activity","type":"related"},{"name":"pH-sensitive calcium channel activity","type":"related"}],"termid":"GO:0160126"}


id: MONDO:0014486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any intellectual disability-expressive aphasia-facial dysmorphism syndrome in which the cause of the disease is a mutation in the ZMYND11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intellectual disability, autosomal dominant 29","termid":"MONDO:0014482"},{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 30","secondary_identifiers":["OMIM:616083","GARD:13136","DOID:0070060","MEDGEN:863604","UMLS:C4015167"],"synonyms":[{"name":"MRD30","type":"exact"},{"name":"ZMYND11 intellectual disability-expressive aphasia-facial dysmorphism syndrome","type":"exact"},{"name":"autosomal dominant intellectual disability 30","type":"exact"},{"name":"autosomal dominant mental retardation 30","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 30","type":"related"},{"name":"intellectual disability, autosomal dominant 30","type":"exact"},{"name":"intellectual disability, autosomal dominant type 30","type":"exact"},{"name":"intellectual disability-expressive aphasia-facial dysmorphism syndrome caused by mutation in ZMYND11","type":"exact"},{"name":"mental retardation, autosomal dominant 30","type":"related"},{"name":"mental retardation, autosomal dominant type 30","type":"exact"}],"termid":"MONDO:0014486","xrefs":{"Monarch":{"xref_id":"0014486"}}}


id: GO:0061080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the right horn of the sinus venosus from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"sinus venosus development","termid":"GO:0003235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"right horn of sinus venosus development","termid":"GO:0061080"}


id: FYPO:0001849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of ferric iron ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal ferric iron import","synonyms":[{"name":"abnormal cellular ferric iron import","type":"exact"},{"name":"abnormal ferric ion import","type":"exact"},{"name":"abnormal ferric ion import across plasma membrane","type":"exact"},{"name":"abnormal ferric iron import during mitotic cell cycle","type":"related"},{"name":"abnormal ferric iron import during vegetative growth","type":"exact"},{"name":"abnormal ferric iron import into cell","type":"exact"},{"name":"abnormal ferric iron ion import","type":"exact"}],"termid":"FYPO:0001849"}


id: PBO:0032700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleus_during_cellular_response_to_hydroxyurea","termid":"PBO:0032700"}


id: GO:0009278
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A peptidoglycan polymer that forms the shape-determining structure of the cell all of Gram-negative bacteria.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete murein sacculus (obsolete GO:0009278)","synonyms":[{"name":"murein sacculus","type":"exact"}],"termid":"GO:0009278"}


id: MONDO:0001314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute episode of pain, swelling, and redness, sometimes associated with fever. It is caused by the deposition of calcium pyrophosphate crystals in the joints.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"},{"relation_name":"is_a","term_name":"metabolic bone disorder","termid":"MONDO:0800486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"chondrocalcinosis","secondary_identifiers":["SCTID:239832006","UMLS:C0553730","DOID:1156","ICD9:275.49","NCIT:C34955","MESH:D002805","HP:0000934","ICD9:712.1","icd11.foundation:2041797033","MEDGEN:154303"],"synonyms":[{"name":"calcium pyrophosphate deposition disease","type":"exact"},{"name":"pseudogout","type":"exact"}],"termid":"MONDO:0001314","xrefs":{"Monarch":{"xref_id":"0001314"}}}


id: PBO:0065191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 3","termid":"PBO:0065191"}


id: MOD:01496
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ4plex-115 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-115 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex115","type":"related"}],"termid":"MOD:01496"}


id: PBO:0069167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 419, pseudogene","termid":"PBO:0069167"}


id: PBO:0069519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 788, pseudogene","termid":"PBO:0069519"}


id: MONDO:0017719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of autosomal recessive lysosomal storage disorders marked by the accumulation of gangliosides. They are caused by impaired enzymes or defective cofactors required for normal ganglioside degradation in the lysosomes. Gangliosidoses are classified by the specific ganglioside accumulated in the defective degradation pathway.","definition_xrefs":["MESH:D005733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"gangliosidosis","secondary_identifiers":["GARD:12510","DOID:2368","Orphanet:309144","UMLS:C0017083","MEDGEN:42149","SCTID:50967008","icd11.foundation:797306953"],"termid":"MONDO:0017719","xrefs":{"Monarch":{"xref_id":"0017719"}}}


id: PBO:0039298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG12 alpha-1,6-mannosyltransferase","termid":"PBO:0039298"}


id: GO:0004331
data:
  {"annotated_genes":["SJAG_00039","SJAG_05314","SJAG_00685","SJAG_02713"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73417,75376,76375,79208],"is_not":false,"summary":null,"term":"GO:0004331"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose 2,6-bisphosphate + H2O = D-fructose-6-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_00685":null,"SJAG_02713":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"fructose-2,6-bisphosphate 2-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70262","MetaCyc:3.1.3.46-RXN","GO:0004330","Reactome:R-HSA-5628905","RHEA:17289"],"synonyms":[{"name":"D-fructose-2,6-bisphosphate 2-phosphohydrolase activity","type":"related"},{"name":"beta-D-fructose-2,6-bisphosphate 2-phosphohydrolase activity","type":"related"},{"name":"fructose-2,6-bisphosphatase activity","type":"related"}],"termid":"GO:0004331","terms_by_termid":{"GO:0004331":null}}


id: GO:0032310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a prostaglandin, any of a group of biologically active metabolites which contain a cyclopentane ring, from a cell or a tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin transport","termid":"GO:0015732"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"is_a","term_name":"icosanoid secretion","termid":"GO:0032309"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"prostaglandin secretion","synonyms":[{"name":"prostacyclin secretion","type":"narrow"}],"termid":"GO:0032310"}


id: GO:0004555
data:
  {"annotated_genes":["SJAG_04859"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71959],"is_not":false,"summary":null,"term":"GO:0004555"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha,alpha-trehalose + H2O = 2 D-glucose.","definition_xrefs":["RHEA:32675","PMID:19897915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalase activity","termid":"GO:0015927"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"alpha,alpha-trehalase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:TREHALA-RXN","Reactome:R-HSA-188985","EC:3.2.1.28"],"synonyms":[{"name":"alpha,alpha-trehalose glucohydrolase activity","type":"related"}],"termid":"GO:0004555","terms_by_termid":{"GO:0004555":null}}


id: PR:Q9P7X8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase I subunit RPA2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR20856:SF5","OMA:SCHPO03090","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit RPA2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.07","secondary_identifiers":["UniProtKB:Q9P7X8"],"synonyms":[{"name":"DNA-directed RNA polymerase I polypeptide 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase I subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR1B","type":"exact"}],"termid":"PR:Q9P7X8"}


id: MONDO:0013499
data:
  {"annotated_genes":["SJAG_05180"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87074],"is_not":false,"summary":null,"term":"MONDO:0013499"}]},"cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the SLX4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05180":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005046","MONDO:0005570","MONDO:0021190","MONDO:0002280"],"is_obsolete":false,"name":"Fanconi anemia complementation group P","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15731","OMIM:613951","UMLS:C3469542","MEDGEN:854020","DOID:0111092"],"synonyms":[{"name":"FANCP","type":"exact"},{"name":"Fanconi Anemia, complementation group type P","type":"exact"},{"name":"Fanconi anaemia caused by mutation in SLX4","type":"exact"},{"name":"Fanconi anaemia caused by mutation in Slx4","type":"exact"},{"name":"Fanconi anaemia complementation group type P","type":"exact"},{"name":"Fanconi anemia caused by mutation in SLX4","type":"exact"},{"name":"Fanconi anemia caused by mutation in Slx4","type":"exact"},{"name":"Fanconi anemia complementation group type P","type":"exact"},{"name":"Fanconi anemia, complementation group P","type":"related"},{"name":"SLX4 Fanconi anaemia","type":"exact"},{"name":"SLX4 Fanconi anemia","type":"exact"},{"name":"Slx4 Fanconi anaemia","type":"exact"},{"name":"Slx4 Fanconi anemia","type":"exact"}],"termid":"MONDO:0013499","terms_by_termid":{"MONDO:0013499":null},"xrefs":{"Monarch":{"xref_id":"0013499"}}}


id: FYPO:0005891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a nuclease activity is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"decreased nuclease activity during nitrogen starvation","synonyms":[{"name":"decreased nuclease activity during nitrogen depletion","type":"exact"},{"name":"decreased nuclease activity during nitrogen deprivation","type":"exact"},{"name":"reduced nuclease activity during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005891"}


id: PBO:0025547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin/metalloprotease fusion protein Udp7","termid":"PBO:0025547"}


id: GO:0009656
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Pigment-protein complex primarily associated to PSII in plants, green algae and cyanobacteria. Involved in state transitions that cause migration to PSI under certain environmental conditions such as high light.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"},{"relation_name":"part_of","term_name":"PSII associated light-harvesting complex II","termid":"GO:0009517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II, peripheral complex","termid":"GO:0009656"}


id: PBO:0044609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 13","termid":"PBO:0044609"}


id: FYPO:0006106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at the central core of the centromeric regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished chromatin binding","termid":"FYPO:0001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abolished chromatin binding at centromere central core","synonyms":[{"name":"chromatin binding at centromere central core abolished","type":"exact"}],"termid":"FYPO:0006106"}


id: PBO:0069327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 586, pseudogene","termid":"PBO:0069327"}


id: PBO:0043060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chordin like 1","termid":"PBO:0043060"}


id: PBO:0031027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_pheromone_in_growth_medium","termid":"PBO:0031027"}


id: GO:0033754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tryptophan + O2 = N-formylkynurenine. The product of the reaction depends on the substrate; D-tryptophan produces N-formyl-D-kynurenine, and L-tryptophan produces N-formyl-L-kynurenine.","definition_xrefs":["EC:1.13.11.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"indoleamine 2,3-dioxygenase activity","synonyms":[{"name":"D-tryptophan:oxygen 2,3-oxidoreductase (decyclizing) activity","type":"narrow"},{"name":"IDO","type":"related"},{"name":"tryptophan pyrrolase activity","type":"broad"}],"termid":"GO:0033754"}


id: MONDO:0024460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Herpesviridae infections (obsolete MONDO:0024460)","termid":"MONDO:0024460","xrefs":{"Monarch":{"xref_id":"0024460"}}}


id: GO:0048572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a day length that falls short of a particular duration known as the 'critical day length'. The critical day length varies between species. Although the term short-day is used, most species actually respond to the duration of the night, so that the response will occur when a period of darkness exceeds the number of hours defined by 24 hours minus the critical day length.","definition_xrefs":["ISBN:0709408862","ISBN:0582015952","ISBN:0697037754","GOC:jid","GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoperiodism","termid":"GO:0009648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"short-day photoperiodism","synonyms":[{"name":"long-night photoperiodism","type":"exact"},{"name":"response to long-night","type":"exact"},{"name":"response to short-day","type":"exact"},{"name":"response to short-day photoperiod","type":"related"}],"termid":"GO:0048572"}


id: MONDO:0003388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma with glandular differentiation arising from the ampulla of Vater. Morphologically, it is characterized by the presence of glycogen-rich cells with hyperchromatic nuclei.","definition_xrefs":["NCIT:C27414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ampulla of vater adenocarcinoma","termid":"MONDO:0002670"},{"relation_name":"is_a","term_name":"extrahepatic bile duct clear cell adenocarcinoma","termid":"MONDO:0004081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"ampulla of vater clear cell adenocarcinoma","secondary_identifiers":["UMLS:C1332246","DOID:5308","MEDGEN:233972"],"synonyms":[{"name":"ampulla of Vater clear cell adenocarcinoma","type":"exact"},{"name":"hepatopancreatic ampulla clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0003388","xrefs":{"Monarch":{"xref_id":"0003388"}}}


id: PBO:0070203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 128 pseudogene","termid":"PBO:0070203"}


id: PATO:0002500
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed ventrolaterally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventrolaterally orientation","synonyms":[{"name":"ventrolaterally directed","type":"exact"}],"termid":"PATO:0002500"}


id: PBO:0050606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSD17B1 antisense RNA 1","termid":"PBO:0050606"}


id: PBO:0084190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H2A; core histone protein required for chromatin assembly and chromosome function; one of two nearly identical subtypes (see also HTA2); DNA damage-dependent phosphorylation by Mec1p facilitates DNA repair; acetylated by Nat4p; N-terminally propionylated in vivo","termid":"PBO:0084190"}


id: PBO:0052543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein B1","termid":"PBO:0052543"}


id: GO:0048646
data:
  {"annotated_genes":["SJAG_01017","SJAG_02718","SJAG_04509","SJAG_01794","SJAG_04853","SJAG_03557","SJAG_04615","SJAG_02700","SJAG_04080","SJAG_03915","SJAG_00826","SJAG_01321","SJAG_04010","SJAG_03536","SJAG_01662","SJAG_01769","SJAG_04483","SJAG_04781","SJAG_02248","SJAG_00971","SJAG_00663","SJAG_02989","SJAG_00486","SJAG_03090","SJAG_02529","SJAG_02712","SJAG_04184","SJAG_05309","SJAG_03250","SJAG_04271","SJAG_04901","SJAG_04238","SJAG_04140","SJAG_04868","SJAG_02320","SJAG_03453","SJAG_04236","SJAG_02864","SJAG_00405","SJAG_01531","SJAG_00993","SJAG_03057","SJAG_04470","SJAG_03587","SJAG_04859","SJAG_03483","SJAG_00114","SJAG_04275","SJAG_00974","SJAG_01993","SJAG_01943","SJAG_02169","SJAG_02736","SJAG_02241","SJAG_03688","SJAG_00821","SJAG_03013","SJAG_01483","SJAG_01894","SJAG_02379","SJAG_03746","SJAG_00514","SJAG_04922"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105479,113095,97267,111887,101065,96853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[94347,111692],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071998"},{"annotations":[94797],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[88531,90571,92099,89026],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[73437],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[118174,109440,118182,104513,114466],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[73438,91829,105331],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031321"},{"annotations":[95706,97884,110486,99160,102050,118935,100240,114313,119236,91618,97921,119419,105644,107748],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0032120"},{"annotations":[108080,92620,104471,97200,114314,103261,107197,100171,100172,97885],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[92843,88579,98618,99312,99230,114707],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1904600"},{"annotations":[111575],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[102630],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[91053],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[88213,91174,90193,111742,93806],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902917"},{"annotations":[92517],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[117320],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903023"},{"annotations":[94838,100173,106375,116359,100174,100457],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of an anatomical structure from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":63,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02379":null,"SJAG_02529":null,"SJAG_02700":null,"SJAG_02712":null,"SJAG_02718":null,"SJAG_02736":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03453":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure formation involved in morphogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"formation of an anatomical structure involved in morphogenesis","type":"exact"}],"termid":"GO:0048646","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0071998":null,"GO:0075296":null,"GO:0075297":null,"GO:1902917":null,"GO:1903023":null,"GO:1903024":null,"GO:1904600":null}}


id: PBO:0072133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 10","termid":"PBO:0072133"}


id: GO:1902566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil activation.","definition_xrefs":["PMID:16254138","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"eosinophil activation","termid":"GO:0043307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil activation","termid":"GO:1902566"}


id: PBO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.2","termid":"PBO:0002208"}


id: GO:0140493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway acting on a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons. The partway stars with the conversion of an acyl-CoA to a trans-2-enoyl-CoA, catalyzed by acyl-CoA oxidase; the electrons removed by oxidation pass directly to oxygen and produce hydrogen peroxide, which is cleaved by peroxisomal catalases. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["PMID:17028011","GOC:ha","PMID:32169171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation using acyl-CoA oxidase","termid":"GO:0033540"},{"relation_name":"is_a","term_name":"very long-chain fatty acid catabolic process","termid":"GO:0042760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"very long-chain fatty acid beta-oxidation","termid":"GO:0140493"}


id: GO:0100033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates fungal-type cell wall biogenesis.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of fungal-type cell wall biogenesis by transcription from RNA polymerase II promoter (obsolete GO:0100033)","termid":"GO:0100033"}


id: MONDO:0000851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete achondrogenesis (obsolete MONDO:0000851)","termid":"MONDO:0000851","xrefs":{"Monarch":{"xref_id":"0000851"}}}


id: GO:0090224
data:
  {"annotated_genes":["SJAG_02332","SJAG_00244","SJAG_00514","SJAG_04464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[71932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[115437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[90198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"spindle organization","termid":"GO:0007051"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02332":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0000226","GO:0007049"],"is_obsolete":false,"name":"regulation of spindle organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of spindle organisation","type":"exact"}],"termid":"GO:0090224","terms_by_termid":{"GO:0060236":null,"GO:0110161":null,"GO:0110162":null,"GO:1901673":null}}


id: GO:0098519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleotide + H2O = nucleotide + phosphate.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide phosphatase activity, acting on free nucleotides (obsolete GO:0098519)","synonyms":[{"name":"nucleotide phosphatase activity","type":"exact"}],"termid":"GO:0098519"}


id: PBO:0000951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS myo-inositol transporter","termid":"PBO:0000951"}


id: GO:1904655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lung alveolus development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23962064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of lung alveolus development","termid":"GO:1904653"},{"relation_name":"positively_regulates","term_name":"lung alveolus development","termid":"GO:0048286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lung alveolus development","synonyms":[{"name":"activation of alveolarization","type":"narrow"},{"name":"activation of alveologenesis","type":"narrow"},{"name":"activation of lung alveolus development","type":"narrow"},{"name":"positive regulation of alveolarization","type":"exact"},{"name":"positive regulation of alveologenesis","type":"exact"},{"name":"up regulation of alveolarization","type":"exact"},{"name":"up regulation of alveologenesis","type":"exact"},{"name":"up regulation of lung alveolus development","type":"exact"},{"name":"up-regulation of alveolarization","type":"exact"},{"name":"up-regulation of alveologenesis","type":"exact"},{"name":"up-regulation of lung alveolus development","type":"exact"},{"name":"upregulation of alveolarization","type":"exact"},{"name":"upregulation of alveologenesis","type":"exact"},{"name":"upregulation of lung alveolus development","type":"exact"}],"termid":"GO:1904655"}


id: PBO:0071858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 53","termid":"PBO:0071858"}


id: PBO:0042106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 179","termid":"PBO:0042106"}


id: PATO:0002346
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's having two connected parts, roughly spherical, of different sizes.","definition_xrefs":["PATOC:MH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snowman-shaped","termid":"PATO:0002346"}


id: PBO:0085812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; exhibits genetic interactions with Rtr1p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YDR066C is not an essential gene; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress; RTR2 has a paralog, RTR1, that arose from the whole genome duplication","termid":"PBO:0085812"}


id: PBO:0113197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific HORMAD protein required for chromosome synapsis; displays Red1p-dependent localization to unsynapsed axial-lateral elements of the synaptonemal complex; required for chiasma formation; binds chromatin to regulate initiation of meiotic recombination; promotes intra- and intermolecular synapsis between dsDNA molecules and folds DNA into rigid protein-DNA filaments in vitro; contains a HORMA domain, and a chromatin-binding region made up of PHD and winged helix-turn-helix domains","termid":"PBO:0113197"}


id: GO:0002902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of B cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte apoptotic process","termid":"GO:0070228"},{"relation_name":"regulates","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of B cell apoptotic process","synonyms":[{"name":"regulation of B cell apoptosis","type":"narrow"}],"termid":"GO:0002902"}


id: PBO:0066177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 3","termid":"PBO:0066177"}


id: GO:1900132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of lipid binding.","definition_xrefs":["GOC:TermGenie","GOC:pm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of lipid binding (obsolete GO:1900132)","synonyms":[{"name":"activation of lipid binding","type":"narrow"},{"name":"up regulation of lipid binding","type":"exact"},{"name":"up-regulation of lipid binding","type":"exact"},{"name":"upregulation of lipid binding","type":"exact"}],"termid":"GO:1900132"}


id: GO:0021644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the vagus nerve is generated and organized. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis.","definition_xrefs":["ISBN:0838580343","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"vagus nerve development","termid":"GO:0021564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagus nerve morphogenesis","synonyms":[{"name":"CN X morphogenesis","type":"related"}],"termid":"GO:0021644"}


id: PBO:0091549
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wee1-50 Overexpression Suppressor","termid":"PBO:0091549"}


id: MONDO:0007699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune disorder caused by the production of autoantibodies against thyroid tissue. There is progressive destruction of the thyroid follicles leading to hypothyroidism.","definition_xrefs":["NCIT:C27191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"autoimmune thyroid disease","termid":"MONDO:0005623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Hashimoto thyroiditis","secondary_identifiers":["ICD9:245.2","OMIM:140300","MEDGEN:151769","DOID:7188","Wikipedia:Hashimoto's_thyroiditis","EFO:0003779","Orphanet:855","ICD10CM:E06.3","icd11.foundation:972507934","MESH:D050031","NANDO:2200335","UMLS:C0677607"],"synonyms":[{"name":"HT","type":"related"},{"name":"Hashimoto disease","type":"exact"},{"name":"Hashimoto hypothyroidism","type":"exact"},{"name":"Hashimoto struma","type":"related"},{"name":"Hashimoto syndrome","type":"related"},{"name":"Hashimoto thyroiditides","type":"related"},{"name":"Hashimoto thyroiditis","type":"exact"},{"name":"Hashimoto's disease","type":"exact"},{"name":"Hashimoto's struma","type":"related"},{"name":"Hashimoto's syndrome","type":"exact"},{"name":"Hashimoto's syndromes","type":"related"},{"name":"Hashimoto's thyroiditis","type":"exact"},{"name":"Hashimotos disease","type":"related"},{"name":"Hashimotos syndrome","type":"related"},{"name":"Ht","type":"related"},{"name":"autoimmune thyroiditis","type":"related"},{"name":"chronic lymphocytic thyroiditides","type":"related"},{"name":"chronic lymphocytic thyroiditis","type":"exact"},{"name":"disease, Hashimoto","type":"related"},{"name":"disease, Hashimoto's","type":"related"},{"name":"hypothyroidism, autoimmune","type":"related"},{"name":"hypothyroidism, autoimmune thyroid autoantibodies, included","type":"related"},{"name":"lymphocytic thyroiditides, chronic","type":"related"},{"name":"lymphocytic thyroiditis","type":"broad"},{"name":"lymphocytic thyroiditis, chronic","type":"related"},{"name":"syndrome, Hashimoto's","type":"related"},{"name":"syndromes, Hashimoto's","type":"related"},{"name":"thyroid autoantibodies","type":"related"},{"name":"thyroiditides, Hashimoto","type":"related"},{"name":"thyroiditides, chronic lymphocytic","type":"related"},{"name":"thyroiditis, Hashimoto","type":"related"},{"name":"thyroiditis, chronic lymphocytic","type":"related"}],"termid":"MONDO:0007699","xrefs":{"Monarch":{"xref_id":"0007699"}}}


id: MONDO:0014024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 43 is a rare, complex hereditary spastic paraplegia characterized by a childhood to adolescent onset of progressive lower limb spasticity, associated with mild to severe gait disturbances, extensor plantar responses, muscle weakness and severe distal atrophy, frequently with upper limb involvement. Additional features may include joint contractures, distal sensory loss and brisk or absent deep tendon reflexes. Other signs, such as depression, memory loss, optic atrophy (with vision loss) and brain iron deposition (revealed by brain imagery), have also been reported.","definition_xrefs":["Orphanet:320370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 43","secondary_identifiers":["GARD:17473","DOID:0110795","MEDGEN:760531","SCTID:764736001","UMLS:C2680446","OMIM:615043"],"synonyms":[{"name":"C19orf12 autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"SPG43","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in C19orf12","type":"exact"},{"name":"autosomal recessive spastic paraplegia 43","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 43","type":"exact"},{"name":"hereditary spastic paraplegia type 43","type":"exact"},{"name":"spastic paraplegia 43, autosomal recessive","type":"related"}],"termid":"MONDO:0014024","xrefs":{"Monarch":{"xref_id":"0014024"}}}


id: PBO:0078249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 25/OR9-2 (pseudogene)","termid":"PBO:0078249"}


id: MONDO:0018901
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013261"},{"annotations":[86505,86504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013262"}]},"cv_name":"mondo","definition":"Left ventricular noncompaction (LVNC) is a rare cardiomyopathy characterized anatomically by prominent left ventricular trabeculae and deep intratrabecular recesses causing progressive systolic and diastolic dysfunction, conduction abnormalities, and occasionally thromboembolic events.","definition_xrefs":["Orphanet:54260"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic cardiac malformation (obsolete MONDO:0018797)","termid":"MONDO:0018797"},{"relation_name":"is_a","term_name":"intrinsic cardiomyopathy","termid":"MONDO:0000591"},{"relation_name":"is_a","term_name":"familial cardiomyopathy","termid":"MONDO:0005217"},{"relation_name":"is_a","term_name":"syndromic congenital heart disease","termid":"MONDO:0100614"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03145":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:604169","GARD:10985","MEDGEN:450531","UMLS:C1960469","DOID:0060480","NANDO:2200231","NCIT:C99544"],"synonyms":[{"name":"LVNC","type":"exact"},{"name":"Lv non-compaction syndrome","type":"exact"},{"name":"left ventricular hypertrabeculation","type":"exact"},{"name":"left ventricular non-compaction cardiomyopathy","type":"exact"},{"name":"left ventricular non-compaction syndrome","type":"exact"},{"name":"left ventricular noncompaction (disease)","type":"exact"},{"name":"spongy myocardium","type":"exact"}],"termid":"MONDO:0018901","terms_by_termid":{"MONDO:0013261":null,"MONDO:0013262":null},"xrefs":{"Monarch":{"xref_id":"0018901"}}}


id: PR:Q9Y7M4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13110:SF0","PRO:DNx","OMA:SCHPO03014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.05c","secondary_identifiers":["UniProtKB:Q9Y7M4"],"synonyms":[{"name":"Spom972h-LSM3","type":"exact"}],"termid":"PR:Q9Y7M4"}


id: PBO:0000213
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chs Four Homologue","termid":"PBO:0000213"}


id: PBO:0087082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L42B; required for propagation of the killer toxin-encoding M1 double-stranded RNA satellite of the L-A double-stranded RNA virus; homologous to mammalian ribosomal protein L36A, no bacterial homolog; RPL42B has a paralog, RPL42A, that arose from the whole genome duplication","termid":"PBO:0087082"}


id: GO:0031923
data:
  {"annotated_genes":["SJAG_03652","SJAG_03808","SJAG_02152","SJAG_02962"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90467,90466,119153,117862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903092"}]},"cv_name":"biological_process","definition":"The directed movement of pyridoxine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, is one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"vitamin B6 transport","termid":"GO:0031919"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"pyridoxine transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031923","terms_by_termid":{"GO:1903092":null}}


id: PBO:0050247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 25","termid":"PBO:0050247"}


id: MONDO:0020052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial autosomal trisomy/tetrasomy (obsolete MONDO:0020052)","secondary_identifiers":["Orphanet:98132"],"termid":"MONDO:0020052","xrefs":{"Monarch":{"xref_id":"0020052"}}}


id: GO:0014872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the physical partitioning and separation of a myoblast into daughter cells. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:ef","GOC:mtg_muscle","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast division","termid":"GO:0014872"}


id: GO:0006316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Lateral transfer of a group I intron to a homologous allele that lacks the intron, mediated by a site-specific endonuclease encoded within the mobile intron; group I introns are self-splicing introns that use guanosine as a cofactor in the splicing reaction.","definition_xrefs":["ISBN:0716743663","PMID:10487208","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron homing","termid":"GO:0006314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"movement of group I intron","termid":"GO:0006316"}


id: SO:0000079
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is dicistronic.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"dicistronic","termid":"SO:0000879"},{"relation_name":"is_a","term_name":"polycistronic_transcript","termid":"SO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicistronic_transcript","synonyms":[{"name":"dicistronic transcript","type":"exact"}],"termid":"SO:0000079"}


id: MONDO:0044747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete human anaplasmosis (obsolete MONDO:0044747)","termid":"MONDO:0044747","xrefs":{"Monarch":{"xref_id":"0044747"}}}


id: MONDO:0100272
data:
  {"annotated_genes":["SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008972"}]},"cv_name":"mondo","definition":"Any peroxisome biogenesis disorder in which the cause of the disease is a mutation in the PEX7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"non-Zellweger spectrum disorder","termid":"MONDO:0100322"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00326":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005559","MONDO:0005066","MONDO:0006025","MONDO:0005244"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX7 defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX7 related peroxisome biogenesis disorder","type":"exact"},{"name":"adult refsum disease due to PEX7 defect (formerly)","type":"narrow"},{"name":"rhizomelic chondrodysplasia punctata type 1 (formerly)","type":"narrow"}],"termid":"MONDO:0100272","terms_by_termid":{"MONDO:0008972":null},"xrefs":{"Monarch":{"xref_id":"0100272"}}}


id: PBO:0005796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside-triphosphatase involved in SSU-rRNA maturation (predicted)","termid":"PBO:0005796"}


id: MONDO:0009187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Celiac disease, epilepsy and cerebral calcification syndrome (CEC) is a rare disorder characterized by the combination of auto-immune intestinal disease, epileptic seizures and cerebral calcifications.","definition_xrefs":["Orphanet:1459"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"antibody mediated epilepsy","termid":"MONDO:0100029"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease-epilepsy-cerebral calcification syndrome","secondary_identifiers":["UMLS:C1856930","GARD:2166","MESH:C535496","OMIM:226810","MEDGEN:341654"],"synonyms":[{"name":"CEC","type":"exact"},{"name":"bilateral occipital calcifications with epilepsy","type":"related"},{"name":"celiac disease epilepsy occipital calcifications","type":"related"},{"name":"celiac disease, epilepsy, and cerebral calcification syndrome","type":"exact"},{"name":"coeliac disease epilepsy occipital calcifications","type":"related"},{"name":"coeliac disease, epilepsy, and cerebral calcification syndrome","type":"exact"},{"name":"epilepsy occipital calcifications","type":"related"},{"name":"epilepsy with bilateral occipital calcifications","type":"related"},{"name":"familial unilateral and bilateral occipital calcifications and epilepsy","type":"related"}],"termid":"MONDO:0009187","xrefs":{"Monarch":{"xref_id":"0009187"}}}


id: GO:0042169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a SH2 domain (Src homology 2) of a protein, a protein domain of about 100 amino-acid residues and belonging to the alpha + beta domain class.","definition_xrefs":["GOC:go_curators","Pfam:PF00017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"SH2 domain binding","termid":"GO:0042169"}


id: GO:0032334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of an inhibin, either of two glycoproteins (designated A and B), secreted by the gonads and present in seminal plasma and follicular fluid, that inhibit pituitary production of follicle-stimulating hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"inhibin secretion","termid":"GO:0032334"}


id: PBO:0079319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 9B","termid":"PBO:0079319"}


id: MONDO:0002192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon benign lesion in the vulva. It manifests with multiple papular lesions which are purple in color. They are usually asymptomatic. Histologically, there is hyperkeratosis, papillomatosis, and dilated blood vessels in the papillary dermis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar benign neoplasm","termid":"MONDO:0000643"},{"relation_name":"is_a","term_name":"angiokeratoma of Fordyce","termid":"MONDO:0003954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"vulvar angiokeratoma","secondary_identifiers":["MEDGEN:266144","UMLS:C1274281","SCTID:402841001","NCIT:C8596","DOID:2066"],"synonyms":[{"name":"angiokeratoma of Fordyce of mammalian vulva","type":"related"},{"name":"angiokeratoma of mammalian vulva","type":"exact"},{"name":"mammalian vulva angiokeratoma","type":"exact"},{"name":"mammalian vulva angiokeratoma of Fordyce","type":"exact"}],"termid":"MONDO:0002192","xrefs":{"Monarch":{"xref_id":"0002192"}}}


id: GO:0051357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a 2-keto-5-iminopiperazine protein chromophore cross-link from the alpha-amino nitrogen of residue n, a methionine, to the alpha-carboxyl carbon of residue n+1, a tyrosine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+2. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons.","definition_xrefs":["PMID:15491166","RESID:AA0377","PMID:11259412","PMID:10852900"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one (obsolete GO:0051357)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via L-methionyl-L-tyrosyl-2-keto-5-iminopiperazine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via L-methionyl-L-tyrosyl-2-keto-5-iminopiperazine","type":"exact"}],"termid":"GO:0051357"}


id: PBO:0041789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPZA1 pseudogene 2","termid":"PBO:0041789"}


id: PBO:0041900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACN subunit beta associated regulatory protein","termid":"PBO:0041900"}


id: FYPO:0006973
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamate methyl ester measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular L-glutamate methyl ester level","synonyms":[{"name":"decreased cellular L-glutamate methyl ester level during mitotic cell cycle","type":"related"},{"name":"decreased cellular L-glutamate methyl ester level during vegetative growth","type":"exact"},{"name":"decreased cellular glutamate methyl ester level during vegetative growth","type":"exact"},{"name":"reduced cellular L-glutamate methyl ester level","type":"exact"}],"termid":"FYPO:0006973"}


id: PBO:0000515
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.26.11","termid":"PBO:0000515"}


id: FYPO:0004665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which linear elements are absent from the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear elements present in decreased numbers","termid":"FYPO:0005986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"linear elements absent from cell","synonyms":[{"name":"absent linear elements","type":"exact"},{"name":"linear elements absent","type":"exact"}],"termid":"FYPO:0004665"}


id: MOD:01582
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01582"}


id: MONDO:0044231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eyebrow, whorl 1n (obsolete MONDO:0044231)","secondary_identifiers":["OMIM:133800"],"synonyms":[{"name":"eyebrow, whorl in","type":"related"}],"termid":"MONDO:0044231","xrefs":{"Monarch":{"xref_id":"0044231"}}}


id: MONDO:0001511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine exophthalmos","termid":"MONDO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyrotoxic exophthalmos","secondary_identifiers":["UMLS:C0155265","MEDGEN:509883","SCTID:19885005","DOID:12362","ICD9:376.21"],"termid":"MONDO:0001511","xrefs":{"Monarch":{"xref_id":"0001511"}}}


id: MONDO:0008033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant limb-girdle muscular dystrophy type 1B (LGMD1B) is a subtype of autosomal dominant limb girdle muscular dystrophy characterized by a variable age of onset of progressive shoulder and hip girdle weakness, with inferior limbs usually being affected prior to upper limbs, and mild joint contractures. LGMD1B is also associated with cardiac dysrhythmias, including atrioventricular conduction blocks, and late-onset dilated cardiomyopathy, that may lead to sudden death.","definition_xrefs":["Orphanet:264"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant limb-girdle muscular dystrophy type 1B (obsolete MONDO:0008033)","termid":"MONDO:0008033","xrefs":{"Monarch":{"xref_id":"0008033"}}}


id: FYPO:0004153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype that reflects increased occurrence of flocculation when the population is in stationary phase. Flocculation is the non-sexual aggregation of single cells.","definition_xrefs":["PMID:15047724","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased flocculation in stationary phase","termid":"FYPO:0004153"}


id: GO:0071748
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains, held together by disulfide bonds, and present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add","PMID:16362985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgA immunoglobulin complex, circulating","termid":"GO:0071746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"monomeric IgA immunoglobulin complex","synonyms":[{"name":"monomeric IgA antibody","type":"exact"},{"name":"monomeric IgA1 antibody","type":"narrow"},{"name":"monomeric IgA2 antibody","type":"narrow"}],"termid":"GO:0071748"}


id: PR:G2TRN0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4H3.16 gene.","definition_xrefs":["UniProtKB:G2TRN0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4H3.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.16","synonyms":[{"name":"Spom972h-SPAC4H3.16","type":"exact"}],"termid":"PR:G2TRN0"}


id: PBO:0047846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formyl peptide receptor 2","termid":"PBO:0047846"}


id: PBO:0114487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I HSP40 co-chaperone; regulates HSP90 and HSP70 functions; acts as an adaptor that helps Rsp5p recognize and ubiquitinate misfolded, cytosolic proteins after heat shock; critical for determining cell size at Start as a function of growth rate; involved in protein translocation across membranes; forms cytotoxic amyloidogenic-like structures in vitro; DnaJ family member; chimeric protein in which the human p58IPK J domain replaces the yeast Ydj1p J domain can complement yeast ydj1 mutant","termid":"PBO:0114487"}


id: SO:0000611
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pyrimidine rich sequence near the 3' end of an intron to which the 5'end becomes covalently bound during nuclear splicing. The resulting structure resembles a lariat.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron_region","termid":"SO:0000841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branch_site","synonyms":[{"name":"branch point","type":"exact"},{"name":"branch site","type":"exact"},{"name":"branch_point","type":"exact"}],"termid":"SO:0000611"}


id: GO:0016084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of myostimulatory hormone, a peptide hormone that stimulates muscle contraction.","definition_xrefs":["GOC:mah","PMID:12204246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0140677","GO:0005488","GO:0098772"],"is_obsolete":false,"name":"myostimulatory hormone activity","termid":"GO:0016084"}


id: GO:1900691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gliotoxin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of gliotoxin biosynthetic process","termid":"GO:1900689"},{"relation_name":"positively_regulates","term_name":"gliotoxin biosynthetic process","termid":"GO:2001310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0019748"],"is_obsolete":false,"name":"positive regulation of gliotoxin biosynthetic process","synonyms":[{"name":"activation of gliotoxin anabolism","type":"exact"},{"name":"activation of gliotoxin biosynthesis","type":"exact"},{"name":"activation of gliotoxin biosynthetic process","type":"narrow"},{"name":"activation of gliotoxin formation","type":"exact"},{"name":"activation of gliotoxin synthesis","type":"exact"},{"name":"positive regulation of gliotoxin anabolism","type":"exact"},{"name":"positive regulation of gliotoxin biosynthesis","type":"exact"},{"name":"positive regulation of gliotoxin formation","type":"exact"},{"name":"positive regulation of gliotoxin synthesis","type":"exact"},{"name":"up regulation of gliotoxin anabolism","type":"exact"},{"name":"up regulation of gliotoxin biosynthesis","type":"exact"},{"name":"up regulation of gliotoxin biosynthetic process","type":"exact"},{"name":"up regulation of gliotoxin formation","type":"exact"},{"name":"up regulation of gliotoxin synthesis","type":"exact"},{"name":"up-regulation of gliotoxin anabolism","type":"exact"},{"name":"up-regulation of gliotoxin biosynthesis","type":"exact"},{"name":"up-regulation of gliotoxin biosynthetic process","type":"exact"},{"name":"up-regulation of gliotoxin formation","type":"exact"},{"name":"up-regulation of gliotoxin synthesis","type":"exact"},{"name":"upregulation of gliotoxin anabolism","type":"exact"},{"name":"upregulation of gliotoxin biosynthesis","type":"exact"},{"name":"upregulation of gliotoxin biosynthetic process","type":"exact"},{"name":"upregulation of gliotoxin formation","type":"exact"},{"name":"upregulation of gliotoxin synthesis","type":"exact"}],"termid":"GO:1900691"}


id: PBO:0073378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sestrin 2","termid":"PBO:0073378"}


id: MONDO:0009472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylation, slow","secondary_identifiers":["MEDGEN:164207","OMIM:243400","UMLS:C0878587"],"synonyms":[{"name":"Fast acetylator phenotype","type":"related"},{"name":"INH inactivation, Fast","type":"related"},{"name":"INH inactivation, slow","type":"related"},{"name":"Isoniazid inactivation, slow","type":"related"},{"name":"acetylation, Fast","type":"related"},{"name":"acetylation, slow","type":"exact"},{"name":"slow acetylator phenotype","type":"related"}],"termid":"MONDO:0009472","xrefs":{"Monarch":{"xref_id":"0009472"}}}


id: SO:0001991
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A consensus AFLP fragment is an AFLP sequence produced from any alignment algorithm which uses assembled multiple AFLP sequences as input.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"consensus_region","termid":"SO:0000994"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consensus_AFLP_fragment","synonyms":[{"name":"consensus AFLP fragment","type":"exact"},{"name":"consensus amplified fragment length polymorphism fragment","type":"exact"}],"termid":"SO:0001991"}


id: PBO:0017790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi GDP-mannose transmembrane transporter Vrg4 (predicted)","termid":"PBO:0017790"}


id: MONDO:0008245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Piebald trait-neurologic defects syndrome is a rare, genetic, pigmentation anomaly of the skin syndrome characterized by ventral as well as dorsal leukoderma of the trunk and a congenital white forelock, in association with cerebellar ataxia, impaired motor coordination, intellectual disability of variable severity and progressive, mild to profound, uni- or bilateral sensorineural hearing loss. There have been no further descriptions in the literature since 1971.","definition_xrefs":["Orphanet:2885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"piebald trait-neurologic defects syndrome","secondary_identifiers":["MESH:C536955","MEDGEN:358177","GARD:5133","OMIM:172850","UMLS:C1868311"],"synonyms":[{"name":"White forelock and leukoderma with neurological impairment","type":"related"},{"name":"piebald trait neurologic defects","type":"related"},{"name":"piebald trait with neurologic defects","type":"related"},{"name":"telfer Sugar Jaeger syndrome","type":"related"},{"name":"telfer-Sugar-Jaeger syndrome","type":"exact"}],"termid":"MONDO:0008245","xrefs":{"Monarch":{"xref_id":"0008245"}}}


id: GO:0055009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of cardiac atrium muscle is generated and organized.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue morphogenesis","termid":"GO:0055008"},{"relation_name":"part_of","term_name":"cardiac atrium morphogenesis","termid":"GO:0003209"},{"relation_name":"part_of","term_name":"atrial cardiac muscle tissue development","termid":"GO:0003228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle tissue morphogenesis","synonyms":[{"name":"atrial heart muscle morphogenesis","type":"exact"},{"name":"atrial myocardium morphogenesis","type":"exact"},{"name":"cardiac atrium muscle morphogenesis","type":"exact"}],"termid":"GO:0055009"}


id: GO:1905310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac neural crest cell migration involved in outflow tract morphogenesis.","definition_xrefs":["GOC:TermGenie","PMID:17628518","GOC:BHF","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:0003253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:1905310"}


id: GO:0046023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of transcription from an RNA polymerase III promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase III promoter during mitotic cell cycle (obsolete GO:0046023)","synonyms":[{"name":"mitotic regulation of transcription from Pol III promoter","type":"exact"},{"name":"regulation of transcription from Pol III promoter, mitotic","type":"exact"},{"name":"regulation of transcription from RNA polymerase III promoter during mitosis","type":"exact"}],"termid":"GO:0046023"}


id: PBO:0060976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroglobin","termid":"PBO:0060976"}


id: GO:0034334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of an adherens junction. An adherens junction is a cell-cell junction composed of the epithelial cadherin-catenin complex at which the cytoplasmic face of the plasma membrane is attached to actin filaments.","definition_xrefs":["GOC:mah","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction organization","termid":"GO:0034332"},{"relation_name":"is_a","term_name":"cell-cell junction maintenance","termid":"GO:0045217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adherens junction maintenance","termid":"GO:0034334"}


id: PBO:0086826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YNL165W is not an essential gene","termid":"PBO:0086826"}


id: GO:0033951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of 1,4-beta-D-xylose residues from the reducing end of oligosaccharides.","definition_xrefs":["EC:3.2.1.156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"oligosaccharide reducing-end xylanase activity","secondary_identifiers":["MetaCyc:3.2.1.156-RXN"],"synonyms":[{"name":"Rex","type":"related"},{"name":"beta-D-xylopyranosyl-(1->4)-beta-D-xylopyranosyl-(1->4)-beta-D-xylopyranose reducing-end xylanase activity","type":"related"},{"name":"reducing end xylose-releasing exo-oligoxylanase activity","type":"related"}],"termid":"GO:0033951"}


id: PBO:0056746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 2B, methylcytidine","termid":"PBO:0056746"}


id: GO:0060970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the areas along the dorsal/ventral axis of the embryonic heart tube are established. This process will determine the patterns of cell differentiation along the axis.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"},{"relation_name":"part_of","term_name":"embryonic heart tube development","termid":"GO:0035050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube dorsal/ventral pattern formation","termid":"GO:0060970"}


id: PBO:0078682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 15-1","termid":"PBO:0078682"}


id: GO:0071970
data:
  {"annotated_genes":["SJAG_04771","SJAG_04666","SJAG_01290","SJAG_01835","SJAG_04483","SJAG_01288","SJAG_00876","SJAG_05285","SJAG_00218","SJAG_03587","SJAG_02222"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71293,73439,74864,76215,91924,106466,113547,116207],"is_not":false,"summary":null,"term":"GO:0071970"},{"annotations":[94797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[87839,92750],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in fungal cell walls.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0034411"},{"relation_name":"is_a","term_name":"fungal-type cell wall beta-glucan biosynthetic process","termid":"GO:0070880"},{"relation_name":"is_a","term_name":"fungal-type cell wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0071969"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"fungal-type cell wall (1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fungal-type cell wall 1,3-beta-D-glucan biosynthetic process","type":"exact"},{"name":"fungal-type cell wall 1,3-beta-glucan anabolism","type":"exact"},{"name":"fungal-type cell wall 1,3-beta-glucan biosynthesis","type":"exact"},{"name":"fungal-type cell wall 1,3-beta-glucan formation","type":"exact"},{"name":"fungal-type cell wall 1,3-beta-glucan synthesis","type":"exact"},{"name":"fungal-type cell wall beta-1,3-glucan anabolism","type":"exact"},{"name":"fungal-type cell wall beta-1,3-glucan biosynthesis","type":"exact"},{"name":"fungal-type cell wall beta-1,3-glucan biosynthetic process","type":"exact"},{"name":"fungal-type cell wall beta-1,3-glucan formation","type":"exact"},{"name":"fungal-type cell wall beta-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0071970","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0140748":null}}


id: PBO:0054739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2148","termid":"PBO:0054739"}


id: PBO:0043212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 5","termid":"PBO:0043212"}


id: GO:0001506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of neurotransmitters and the storage of the synthesized molecules.","definition_xrefs":["ISBN:0123668387","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter biosynthetic process and storage (obsolete GO:0001506)","synonyms":[{"name":"neurotransmitter anabolism and storage","type":"exact"},{"name":"neurotransmitter biosynthetic process and storage","type":"exact"},{"name":"neurotransmitter formation and storage","type":"exact"},{"name":"neurotransmitter synthesis and storage","type":"exact"}],"termid":"GO:0001506"}


id: MONDO:0024250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"pityriasis lichenoides","termid":"MONDO:0024249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"acute lichenoid pityriasis","secondary_identifiers":["ICD9:696.5","MEDGEN:57997","SCTID:86487001","UMLS:C0162852"],"synonyms":[{"name":"Habermann disease","type":"related"},{"name":"Habermann's disease","type":"related"},{"name":"Habermanns disease","type":"related"},{"name":"Mucha Habermann disease","type":"related"},{"name":"Mucha-Habermann disease","type":"related"},{"name":"PLEVA","type":"related"},{"name":"disease, Habermann","type":"related"},{"name":"disease, Habermann's","type":"related"},{"name":"disease, Mucha-Habermann","type":"related"},{"name":"mucha habermann disease","type":"related"},{"name":"mucha-habermann disease","type":"related"},{"name":"mucha-habermann syndrome","type":"related"},{"name":"parapsoriasis lichenoides et varioliformis acuta","type":"related"},{"name":"parapsoriasis varioliformis acuta","type":"related"}],"termid":"MONDO:0024250","xrefs":{"Monarch":{"xref_id":"0024250"}}}


id: PBO:0072916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor class B member 1","termid":"PBO:0072916"}


id: GO:1905558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic nuclear envelope disassembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18765790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of mitotic nuclear envelope disassembly","termid":"GO:1905557"},{"relation_name":"negatively_regulates","term_name":"mitotic nuclear membrane disassembly","termid":"GO:0007077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0061024"],"is_obsolete":false,"name":"negative regulation of mitotic nuclear envelope disassembly","synonyms":[{"name":"down regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"down regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"down regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"down regulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"down-regulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"downregulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"downregulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"downregulation of mitotic nuclear envelope degradation","type":"exact"},{"name":"downregulation of mitotic nuclear envelope disassembly","type":"exact"},{"name":"inhibition of mitotic nuclear envelope breakdown","type":"narrow"},{"name":"inhibition of mitotic nuclear envelope catabolism","type":"narrow"},{"name":"inhibition of mitotic nuclear envelope degradation","type":"narrow"},{"name":"inhibition of mitotic nuclear envelope disassembly","type":"narrow"},{"name":"negative regulation of mitotic nuclear envelope breakdown","type":"exact"},{"name":"negative regulation of mitotic nuclear envelope catabolism","type":"exact"},{"name":"negative regulation of mitotic nuclear envelope degradation","type":"exact"}],"termid":"GO:1905558"}


id: MONDO:0019053
data:
  {"annotated_genes":["SJAG_02848","SJAG_00326","SJAG_04763","SJAG_02619","SJAG_03440","SJAG_02997","SJAG_02384","SJAG_04823","SJAG_03781","SJAG_04146","SJAG_03324","SJAG_02693","SJAG_00891","SJAG_01165","SJAG_00702","SJAG_05950","SJAG_02788"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013571"},{"annotations":[86638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009958"},{"annotations":[85862,85861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013726"},{"annotations":[87567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013948"},{"annotations":[87211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054549"},{"annotations":[87568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013949"},{"annotations":[87566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013950"},{"annotations":[87569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013951"},{"annotations":[87570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013952"},{"annotations":[87528,87527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013967"},{"annotations":[87174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008953"},{"annotations":[87518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011101"},{"annotations":[87163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008954"},{"annotations":[87432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008736"},{"annotations":[87550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013927"},{"annotations":[87552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013930"},{"annotations":[87553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013931"},{"annotations":[87555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013936"},{"annotations":[87557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013937"},{"annotations":[87558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013938"},{"annotations":[87556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013939"},{"annotations":[87561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013942"},{"annotations":[87559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013943"},{"annotations":[87564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013945"},{"annotations":[86635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009959"},{"annotations":[86373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008972"},{"annotations":[86222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014743"}]},"cv_name":"mondo","definition":"A group of congenital disorders of lipid metabolism, caused by loss of the normal peroxisomes. Signs and symptoms include developmental delays, intellectual disability, characteristic facial dysmorphic features, hepatomegaly, and hypotonia.","definition_xrefs":["NCIT:C85005"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_02384":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02788":null,"SJAG_02848":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04763":null,"SJAG_04823":null,"SJAG_05950":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"peroxisomal disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:906","MEDGEN:129185","NANDO:2100166","NANDO:1200758","GARD:18885","SCTID:238059005","UMLS:C0282528","Orphanet:68373","ICD9:277.86","ICD9:277.89","icd11.foundation:782299726"],"synonyms":[{"name":"disorder of peroxisomal function","type":"exact"},{"name":"peroxisomal disease","type":"exact"},{"name":"peroxisomal disorder","type":"exact"},{"name":"peroxisomal function disorder","type":"exact"}],"termid":"MONDO:0019053","terms_by_termid":{"MONDO:0008736":null,"MONDO:0008953":null,"MONDO:0008954":null,"MONDO:0008972":null,"MONDO:0009958":null,"MONDO:0009959":null,"MONDO:0011101":null,"MONDO:0013571":null,"MONDO:0013726":null,"MONDO:0013927":null,"MONDO:0013930":null,"MONDO:0013931":null,"MONDO:0013936":null,"MONDO:0013937":null,"MONDO:0013938":null,"MONDO:0013939":null,"MONDO:0013942":null,"MONDO:0013943":null,"MONDO:0013945":null,"MONDO:0013948":null,"MONDO:0013949":null,"MONDO:0013950":null,"MONDO:0013951":null,"MONDO:0013952":null,"MONDO:0013967":null,"MONDO:0014743":null,"MONDO:0054549":null},"xrefs":{"Monarch":{"xref_id":"0019053"}}}


id: GO:0062147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + chloride + H+ + L-lysine + O2 = 4-chloro-L-lysine + CO2 + H2O + succinate.","definition_xrefs":["PMID:30867596","RHEA:59884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated","termid":"GO:0050498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-lysine 4-chlorinase activity","termid":"GO:0062147"}


id: PBO:0051602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 25","termid":"PBO:0051602"}


id: PR:Q9Y7I4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12646:SF0","PRO:DNx","OMA:SCHPO01102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.06c","secondary_identifiers":["UniProtKB:Q9Y7I4"],"synonyms":[{"name":"Dol-P-Man-dependent alpha(1-3)-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALG3","type":"exact"},{"name":"asparagine-linked glycosylation protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dolichyl-P-Man:Man(5)GlcNAc(2)-PP-dolichyl mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dolichyl-phosphate-mannose--glycolipid alpha-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7I4"}


id: PBO:0053943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1246","termid":"PBO:0053943"}


id: PR:O74314
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15D4.09c gene.","definition_xrefs":["UniProtKB:O74314","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine gamma-synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.09c","synonyms":[{"name":"O-succinylhomoserine (thiol)-lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC15D4.09c","type":"exact"}],"termid":"PR:O74314"}


id: MONDO:0100615
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Liver disease found in patients on parenteral nutrition for intestinal failure. May develop with few clinical features.","definition_xrefs":["PMID:16473076","PMID:31885838","PMID:32226616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"intestinal failure–associated liver disease","termid":"MONDO:0100615","xrefs":{"Monarch":{"xref_id":"0100615"}}}


id: FYPO:0005299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint during cellular response to UV","termid":"FYPO:0002102"},{"relation_name":"is_a","term_name":"normal mitotic G2 DNA damage checkpoint","termid":"FYPO:0006578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000631","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV","synonyms":[{"name":"normal G2 DNA damage checkpoint during cellular response to UV during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint activation during cellular response to UV","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0005299"}


id: MONDO:1012419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"episodic falling, non-human animal","termid":"MONDO:1011885"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic falling, dog","secondary_identifiers":["OMIA:001592-9615"],"termid":"MONDO:1012419","xrefs":{"Monarch":{"xref_id":"1012419"}}}


id: PBO:0052337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA2026","termid":"PBO:0052337"}


id: PBO:0055731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain 7","termid":"PBO:0055731"}


id: MONDO:1011756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exfoliative cutaneous lupus erythematosus, non-human animal","secondary_identifiers":["OMIA:001609"],"termid":"MONDO:1011756","xrefs":{"Monarch":{"xref_id":"1011756"}}}


id: GO:0160030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of pollen intine, the inner layer of the pollen wall. The reticulate pollen wall pattern consists of two layers, exine and intine.","definition_xrefs":["PMID:35498668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pollen wall assembly","termid":"GO:0010208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"pollen intine formation","termid":"GO:0160030"}


id: PBO:0043979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cold shock domain containing C2","termid":"PBO:0043979"}


id: PBO:0068188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 495","termid":"PBO:0068188"}


id: GO:0102875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-18:2-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-18:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-18:2-monogalactosyldiacylglycerol desaturase activity (obsolete GO:0102875)","termid":"GO:0102875"}


id: GO:0004637
data:
  {"annotated_genes":["SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71044],"is_not":false,"summary":null,"term":"GO:0004637"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phospho-D-ribosylamine + ATP + glycine = N(1)-(5-phospho-D-ribosyl)glycinamide + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.4.13","RHEA:17453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"phosphoribosylamine-glycine ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:GLYRIBONUCSYN-RXN","Reactome:R-HSA-73814","KEGG_REACTION:R04144"],"synonyms":[{"name":"2-amino-N-ribosylacetamide 5'-phosphate kinosynthase activity","type":"related"},{"name":"5'-phosphoribosylglycinamide synthetase activity","type":"related"},{"name":"5-phospho-D-ribosylamine:glycine ligase (ADP-forming)","type":"related"},{"name":"GAR","type":"related"},{"name":"GAR synthetase activity","type":"related"},{"name":"GARS activity","type":"related"},{"name":"glycinamide ribonucleotide synthetase activity","type":"related"},{"name":"glycineamide ribonucleotide synthetase activity","type":"related"},{"name":"phosphoribosylglycinamide synthetase activity","type":"related"},{"name":"phosphoribosylglycineamide synthetase activity","type":"related"}],"termid":"GO:0004637","terms_by_termid":{"GO:0004637":null}}


id: FYPO:0005246
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing melibiose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0001985","FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002057"],"is_obsolete":false,"name":"decreased cell population growth on melibiose carbon source","synonyms":[{"name":"decreased growth on melibiose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on melibiose carbon source","type":"exact"},{"name":"reduced cell growth on melibiose carbon source","type":"related"},{"name":"slow cell growth on melibiose carbon source","type":"narrow"}],"termid":"FYPO:0005246"}


id: PBO:0055072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2489","termid":"PBO:0055072"}


id: FYPO:0003341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"multinucleate","synonyms":[{"name":"multinucleate cells","type":"exact"},{"name":"multiple nuclei","type":"exact"}],"termid":"FYPO:0003341"}


id: PBO:0055925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A13, pseudogene","termid":"PBO:0055925"}


id: PBO:0059913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 36","termid":"PBO:0059913"}


id: GO:0019468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of nopaline (N-(I-carboxy-4-guanidinobutyl)glutamic acid), a rare amino-acid derivative.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete nopaline catabolic process (obsolete GO:0019468)","synonyms":[{"name":"nopaline breakdown","type":"exact"},{"name":"nopaline catabolism","type":"exact"},{"name":"nopaline degradation","type":"exact"}],"termid":"GO:0019468"}


id: GO:0018314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent cross-linking of pyrroloquinoline-quinone to peptidyl-glutamic acid and peptidyl-tyrosine.","definition_xrefs":["RESID:AA0283","PMID:7665488"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-pyrroloquinoline-quinone linkage (obsolete GO:0018314)","synonyms":[{"name":"protein-pyrroloquinoline-quinone linkage","type":"exact"}],"termid":"GO:0018314"}


id: GO:0101027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of axons of the optical nerve following their loss or damage.","definition_xrefs":["PMID:16699509","GOC:pga"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optical nerve axon regeneration","termid":"GO:0101027"}


id: PBO:0082494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of 1,3-beta-D-glucan synthase; functionally redundant with alternate catalytic subunit Gsc2p; binds to regulatory subunit Rho1p; involved in cell wall synthesis and maintenance; localizes to sites of cell wall remodeling; FKS1 has a paralog, GSC2, that arose from the whole genome duplication","termid":"PBO:0082494"}


id: PBO:0083069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrouridine synthase; member of a widespread family of conserved proteins including Smm1p, Dus1p, and Dus4p; contains a consensus oleate response element (ORE) in its promoter region; forms nuclear foci upon DNA replication stress","termid":"PBO:0083069"}


id: PR:Q9Y7L2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2A9.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7L2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA methyltransferase C2A9.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.10","synonyms":[{"name":"Spom972h-SPBC2A9.10","type":"exact"}],"termid":"PR:Q9Y7L2"}


id: MONDO:0004072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete protoplasmic astrocytoma (obsolete MONDO:0004072)","termid":"MONDO:0004072","xrefs":{"Monarch":{"xref_id":"0004072"}}}


id: PBO:0030394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_multiseptate_vegetative_cell","termid":"PBO:0030394"}


id: PBO:0060431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide associated complex subunit alpha 2","termid":"PBO:0060431"}


id: MONDO:0009874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rabson-Mendenhall syndrome belongs to the group of extreme insulin-resistance syndromes (which also includes leprechaunism, the lipodystrophies, and the type A and B insulin resistance syndromes).","definition_xrefs":["Orphanet:769"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rabson-Mendenhall syndrome","secondary_identifiers":["GARD:226","MEDGEN:78783","icd11.foundation:1018973126","NCIT:C131000","SCTID:33559001","OMIM:262190","MESH:D056731","UMLS:C0271695","ICD9:259.8"],"synonyms":[{"name":"Mendenhall syndrome","type":"related"},{"name":"Rabson-Mendenhall syndrome","type":"exact"},{"name":"pineal hyperplasia, insulin-resistant diabetes mellitus, and somatic abnormalities","type":"related"}],"termid":"MONDO:0009874","xrefs":{"Monarch":{"xref_id":"0009874"}}}


id: MONDO:0016382
data:
  {"annotated_genes":["SJAG_01338","SJAG_01798"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859355"},{"annotations":[87115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011405"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01338":null,"SJAG_01798":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary poikiloderma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:222628","UMLS:C5680891","GARD:20545","MEDGEN:1842934"],"termid":"MONDO:0016382","terms_by_termid":{"MONDO:0011405":null,"MONDO:0859355":null},"xrefs":{"Monarch":{"xref_id":"0016382"}}}


id: PBO:0065201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 31","termid":"PBO:0065201"}


id: PBO:0071912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 51","termid":"PBO:0071912"}


id: PBO:0113427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine kinase that controls cell cycle progression; represses rDNA transcription and promotes 20S pre-rRNA maturation; catalytic activity regulates its association with pre-40S particles where it prevents premature entry into translation; downregulates centromeric RNA levels, limits RNAPII accessibility, stimulates cenRNA degradation and promotes timely kinetochore assembly; autophosphorylates and phosphorylates Rpa43p in anaphase to remove Pol I from rDNA","termid":"PBO:0113427"}


id: GO:0047288
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminyl derivative + CMP-N-acetyl-beta-neuraminate = N-acetyl-alpha-neuraminyl-(2->3)-beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminyl derivative + CMP + H+.","definition_xrefs":["MetaCyc:2.4.99.2-RXN","EC:2.4.3.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialyltransferase activity","termid":"GO:0008373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminide alpha-2,3- sialyltransferase","secondary_identifiers":["RHEA:18021"],"synonyms":[{"name":"monosialoganglioside sialyltransferase","type":"exact"}],"termid":"GO:0047288"}


id: GO:0047201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 1-O-galloyl-beta-D-glucose = 1,6-bis-O-galloyl-beta-D-glucose + D-glucose.","definition_xrefs":["EC:2.3.1.90","RHEA:11416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"beta-glucogallin O-galloyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00049","MetaCyc:2.3.1.90-RXN"],"synonyms":[{"name":"1-O-galloyl-beta-D-glucose:1-O-galloyl-beta-D-glucose O-galloyltransferase activity","type":"related"}],"termid":"GO:0047201"}


id: PBO:0079197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 26, pseudogene","termid":"PBO:0079197"}


id: PBO:0064254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A3","termid":"PBO:0064254"}


id: PBO:0084671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial aminopeptidase; cleaves the N termini of at least 38 imported proteins after cleavage by the mitochondrial processing peptidase (MPP), thereby increasing their stability; member of the aminopeptidase P family; yeast ortholog of human gene XPNPEP3, which is mutated in rare hereditary kidney disease similar to nephronophthisis","termid":"PBO:0084671"}


id: MONDO:0002643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological processes of the vestibular labyrinth which contains part of the balancing apparatus. Patients with vestibular diseases show instability and are at risk of frequent falls.","definition_xrefs":["MESH:D015837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"},{"relation_name":"is_a","term_name":"neuromuscular disease","termid":"MONDO:0019056"},{"relation_name":"is_a","term_name":"perceptual disorders","termid":"MONDO:0024417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibular disorder","secondary_identifiers":["EFO:0009691","DOID:3426","UMLS:C0042594","MEDGEN:12079"],"synonyms":[{"name":"disease of vestibular labyrinth","type":"exact"},{"name":"disease of vestibular system","type":"exact"},{"name":"disease or disorder of vestibular labyrinth","type":"exact"},{"name":"disorder of vestibular labyrinth","type":"exact"},{"name":"disorder of vestibular system","type":"related"},{"name":"vertigo, vestibular disorder","type":"exact"},{"name":"vestibular labyrinth disease","type":"exact"},{"name":"vestibular labyrinth disease or disorder","type":"exact"},{"name":"vestibular system disease","type":"exact"}],"termid":"MONDO:0002643","xrefs":{"Monarch":{"xref_id":"0002643"}}}


id: PBO:0011155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Las1 protein","termid":"PBO:0011155"}


id: MONDO:0021002
data:
  {"annotated_genes":["SJAG_01213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87066],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010408"}]},"cv_name":"mondo","definition":"A disease characterized by the presence of syndactyly, including syndromic and non-syndromic forms.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01213":null},"genotype_count":0,"is_obsolete":false,"name":"syndactyly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10042778","ICD9:755.1","MESH:D013576","UMLS:C0039075","MEDGEN:52619","HP:0001159","DOID:11193"],"synonyms":[{"name":"syndactyly (disease)","type":"exact"}],"termid":"MONDO:0021002","terms_by_termid":{"MONDO:0010408":null},"xrefs":{"Monarch":{"xref_id":"0021002"}}}


id: PBO:0051648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine monophosphate dehydrogenase 1 pseudogene 3","termid":"PBO:0051648"}


id: PBO:0071533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL34 pseudogene 36","termid":"PBO:0071533"}


id: GO:0016989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of binding to a sigma factor and stopping, preventing or reducing the rate of its transcriptional activity.","definition_xrefs":["GOC:txnOH","Wikipedia:Anti-sigma_factors","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription corepressor activity","termid":"GO:0003714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003714"},{"rel_name":"is_a","termid":"GO:0003712"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0140110"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0003714","GO:0140110","GO:0003674","GO:0030674","GO:0003712"],"is_obsolete":false,"name":"sigma factor antagonist activity","synonyms":[{"name":"anti-sigma factor activity","type":"exact"}],"termid":"GO:0016989"}


id: PBO:0051107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-38-4 (non-functional)","termid":"PBO:0051107"}


id: PBO:0063776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 3","termid":"PBO:0063776"}


id: PBO:0063782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 7","termid":"PBO:0063782"}


id: GO:0044612
data:
  {"annotated_genes":["SJAG_01065"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103337],"is_not":false,"summary":null,"term":"GO:0044612"}]},"cv_name":"cellular_component","definition":"A substructure of the nuclear pore complex (NPC) that serves to connect members of the central transport channel (composed of FG-nucleoporins) to the core scaffold (composed of the inner and outer NPC rings). In S. cerevisiae, the linkers are Nic96p and Nup82p. In vertebrates, they are Nup93 and Nup88. Components are arranged in 8-fold symmetrical 'spokes' around the central transport channel. Both linkers can be isolated in association with specific FG-nucleoporins, complexes that are sometimes referred to as the Nic96 complex (Nic96p-Nsp1p-Nup49p-Nup57p) and the Nup82 complex (Nup82p-Nup116p-Nup159p-Gle2p).","definition_xrefs":["PMID:22419078","PMID:19524430","PMID:20947011","GOC:dgf","PMID:18046406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01065":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005643","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear pore linkers","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Nic96 complex","type":"related"},{"name":"Nup82 complex","type":"related"}],"termid":"GO:0044612","terms_by_termid":{"GO:0044612":null}}


id: PBO:0061175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 5-1","termid":"PBO:0061175"}


id: MONDO:0958262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary pigmented nodular adrenocortical disease","termid":"MONDO:0015999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated primary pigmented nodular adrenocortical disease","secondary_identifiers":["UMLS:C5816750","MEDGEN:1853165","Orphanet:647772"],"termid":"MONDO:0958262","xrefs":{"Monarch":{"xref_id":"0958262"}}}


id: GO:0051184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a cofactor from one side of a membrane to the other. A cofactor is a substance that is required for the activity of an enzyme or other protein.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cofactor transmembrane transporter activity (obsolete GO:0051184)","synonyms":[{"name":"cofactor transporter activity","type":"related"},{"name":"vitamin or cofactor transporter activity","type":"broad"}],"termid":"GO:0051184"}


id: MONDO:0013107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing atopic dermatitis that is associated with variation in the region 11q13.5.","definition_xrefs":["MONDO:patterns/inherited_susceptibility","DOID:0110103","PMID:19349984"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"atopic eczema","termid":"MONDO:0004980"},{"relation_name":"is_a","term_name":"dermatitis, atopic, susceptibility to","termid":"MONDO:0100178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatitis, atopic, 7","secondary_identifiers":["MEDGEN:414058","UMLS:C2751599","OMIM:613064","MESH:C567796"],"synonyms":[{"name":"ATOD7","type":"exact"},{"name":"atopic dermatitis 7","type":"exact"},{"name":"atopic dermatitis type 7","type":"exact"},{"name":"dermatitis, ATOPIC, 7","type":"related"},{"name":"dermatitis, atopic, susceptibility to, 7","type":"exact"}],"termid":"MONDO:0013107","xrefs":{"Monarch":{"xref_id":"0013107"}}}


id: GO:0010994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating free ubiquitin chains, compounds composed of a large number of ubiquitin monomers. These chains are not conjugated to a protein.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polymerization","termid":"GO:0051258"},{"relation_name":"part_of","term_name":"ubiquitin recycling","termid":"GO:0010992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"free ubiquitin chain polymerization","termid":"GO:0010994"}


id: PBO:0044567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in azoospermia like","termid":"PBO:0044567"}


id: GO:0045830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isotype switching.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin production","termid":"GO:0002639"},{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin mediated immune response","termid":"GO:0002891"},{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"positive regulation of B cell activation","termid":"GO:0050871"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310","GO:0010467"],"is_obsolete":false,"name":"positive regulation of isotype switching","synonyms":[{"name":"activation of isotype switching","type":"narrow"},{"name":"positive regulation of class switch recombination","type":"exact"},{"name":"positive regulation of class switching","type":"exact"},{"name":"positive regulation of isotype switch recombination","type":"exact"},{"name":"stimulation of isotype switching","type":"narrow"},{"name":"up regulation of isotype switching","type":"exact"},{"name":"up-regulation of isotype switching","type":"exact"},{"name":"upregulation of isotype switching","type":"exact"}],"termid":"GO:0045830"}


id: GO:0043799
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115137],"is_not":false,"summary":null,"term":"GO:0043799"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: (1) glycine + H2O + O2 = glyoxylate + NH3 + hydrogen peroxide; (2) D-alanine + H2O + O2 = pyruvate + NH3 + hydrogen peroxide; (3) sarcosine + H2O + O2 = glyoxylate + methylamine + hydrogen peroxide; (4) N-ethylglycine + H2O + O2 = glyoxylate + ethylamine + hydrogen peroxide.","definition_xrefs":["EC:1.4.3.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aliphatic amine oxidase activity","termid":"GO:0052595"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycine oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycine:oxygen oxidoreductase (deaminating)","type":"exact"}],"termid":"GO:0043799","terms_by_termid":{"GO:0043799":null}}


id: GO:0042386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the characteristics of a mature hemocyte. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen.","definition_xrefs":["GOC:jl","GOC:mtg_sensu","PMID:9550723","CL:0000387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemocyte differentiation","synonyms":[{"name":"arthropod blood cell differentiation","type":"exact"}],"termid":"GO:0042386"}


id: GO:0016234
data:
  {"annotated_genes":["SJAG_03048","SJAG_04187","SJAG_00471","SJAG_03543","SJAG_00302","SJAG_04855","SJAG_01805","SJAG_04768","SJAG_01408","SJAG_00178","SJAG_04055","SJAG_03745","SJAG_04645","SJAG_00335","SJAG_03161","SJAG_01374","SJAG_04601","SJAG_00436","SJAG_01186","SJAG_01837","SJAG_00082","SJAG_03300","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105736,115879,87812,99367,115878,104547,94121,104640,112425,112981,117054,91276,102693,105349,106101,92566,90313,115277,112982,89321,111568,112980,102611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140602"}]},"cv_name":"cellular_component","definition":"A discrete intracellular part formed of aggregated molecules such as proteins or other biopolymers.","definition_xrefs":["GOC:mah","PMID:11121744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00178":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00436":null,"SJAG_00471":null,"SJAG_01186":null,"SJAG_01374":null,"SJAG_01408":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03300":null,"SJAG_03543":null,"SJAG_03745":null,"SJAG_04055":null,"SJAG_04140":null,"SJAG_04187":null,"SJAG_04601":null,"SJAG_04645":null,"SJAG_04768":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inclusion body","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Inclusion_bodies","NIF_Subcellular:sao120573470"],"synonyms":[{"name":"cellular inclusion","type":"related"},{"name":"neuronal cytoplasmic inclusion","type":"narrow"}],"termid":"GO:0016234","terms_by_termid":{"GO:0140602":null}}


id: GO:0016630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chlorophyllide a + NADP+ = protochlorophyllide + NADPH + H+.","definition_xrefs":["EC:1.3.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protochlorophyllide reductase activity","secondary_identifiers":["RHEA:11132","MetaCyc:RXN1F-10"],"synonyms":[{"name":"NADPH-protochlorophyllide oxidoreductase activity","type":"related"},{"name":"NADPH-protochlorophyllide reductase activity","type":"related"},{"name":"NADPH2-protochlorophyllide oxidoreductase activity","type":"related"},{"name":"chlorophyllide-a:NADP+ 7,8-oxidoreductase activity","type":"related"},{"name":"protochlorophyllide oxidoreductase activity","type":"related"},{"name":"protochlorophyllide photooxidoreductase activity","type":"related"}],"termid":"GO:0016630"}


id: MONDO:0000464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Stargardt disease (obsolete MONDO:0000464)","termid":"MONDO:0000464","xrefs":{"Monarch":{"xref_id":"0000464"}}}


id: PBO:0064592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member K, pseudogene","termid":"PBO:0064592"}


id: PBO:0000622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf111","termid":"PBO:0000622"}


id: PBO:0116750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related BAF chromatin remodeling complex subunit C2","termid":"PBO:0116750"}


id: PBO:0060874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural EGFL like 2","termid":"PBO:0060874"}


id: PBO:0041483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 96","termid":"PBO:0041483"}


id: MONDO:0008539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete distal arthrogryposis type 10 (obsolete MONDO:0008539)","termid":"MONDO:0008539","xrefs":{"Monarch":{"xref_id":"0008539"}}}


id: PBO:0090714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tyrosine-tRNA ligase","termid":"PBO:0090714"}


id: MONDO:0956966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma non-WNT/non-SHH that is characterized as a molecular subtype by absent TP53 mutations and MYC amplifications that may be present.","definition_xrefs":["DOID:0080707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma non-WNT/non-SHH","termid":"MONDO:0850198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma non-WNT/non-SHH group 3","secondary_identifiers":["MEDGEN:1389944","NCIT:C129445","UMLS:C4330665"],"termid":"MONDO:0956966","xrefs":{"Monarch":{"xref_id":"0956966"}}}


id: PBO:0078024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 14","termid":"PBO:0078024"}


id: GO:1990480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalyzes the condensation of dimethylallyl diphosphate and isopentenyl diphosphate to geranyl diphosphate, the key precursor of monoterpene biosynthesis.","definition_xrefs":["PMID:10557273","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete geranyl diphosphate synthase (obsolete GO:1990480)","termid":"GO:1990480"}


id: MONDO:0001630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An occlusion of a branch of the retinal artery.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal artery occlusion","termid":"MONDO:0006948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"branch retinal artery occlusion","secondary_identifiers":["ICD9:362.32","UMLS:C0006123","MEDGEN:14217","NCIT:C34436","DOID:13094","SCTID:50821009"],"synonyms":[{"name":"arterial retinal branch occlusion","type":"exact"},{"name":"retinal arterial branch occlusion","type":"exact"}],"termid":"MONDO:0001630","xrefs":{"Monarch":{"xref_id":"0001630"}}}


id: PBO:0069613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 890, pseudogene","termid":"PBO:0069613"}


id: PBO:0088019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type V myosin motor involved in actin-based transport of cargos; required for the polarized delivery of secretory vesicles, the vacuole, late Golgi elements, peroxisomes, lipid droplets, and the mitotic spindle; MYO2 has a paralog, MYO4, that arose from the whole genome duplication","termid":"PBO:0088019"}


id: PBO:0046752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 6","termid":"PBO:0046752"}


id: GO:0010801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of peptidyl-threonine phosphorylation. Peptidyl-threonine phosphorylation is the phosphorylation of peptidyl-threonine to form peptidyl-O-phospho-L-threonine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"regulation of peptidyl-threonine phosphorylation","termid":"GO:0010799"},{"relation_name":"negatively_regulates","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-threonine phosphorylation","termid":"GO:0010801"}


id: PBO:0003669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human c15orf24 ortholog","termid":"PBO:0003669"}


id: PBO:0066976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 279","termid":"PBO:0066976"}


id: PBO:0086085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase of the ER membrane; transfers mannose from dolichyl phosphate-D-mannose to protein serine and threonine residues; 1 of 7 related proteins involved in O-glycosylation which is essential for cell wall rigidity; functions as a heterodimer with Pmt2p but can also pair with Pmt3p; involved in ER quality control; amino terminus faces cytoplasm, carboxyl terminus faces ER lumen","termid":"PBO:0086085"}


id: PBO:0110052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA-binding protein Yme2","termid":"PBO:0110052"}


id: PBO:0000442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase X family","termid":"PBO:0000442"}


id: PBO:0028271
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_malate_dehydrogenase_(decarboxylating)_(NAD+)_activity","termid":"PBO:0028271"}


id: GO:0021878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into an astrocyte that resides in the forebrain.","definition_xrefs":["GO_REF:0000021","PMID:16226447","GOC:cls","GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte fate commitment","termid":"GO:0060018"},{"relation_name":"part_of","term_name":"forebrain astrocyte differentiation","termid":"GO:0021896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain astrocyte fate commitment","termid":"GO:0021878"}


id: PBO:0089838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit Syf2","termid":"PBO:0089838"}


id: PBO:0052156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 5","termid":"PBO:0052156"}


id: PBO:0046416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A2","termid":"PBO:0046416"}


id: PBO:0074016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 10","termid":"PBO:0074016"}


id: MONDO:0014885
data:
  {"annotated_genes":["SJAG_00108"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86453],"is_not":false,"summary":null,"term":"MONDO:0014885"}]},"cv_name":"mondo","definition":"Any Hermansky-Pudlak syndrome in which the cause of the disease is a mutation in the AP3D1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hermansky-Pudlak syndrome","termid":"MONDO:0019312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00108":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005570","MONDO:0005093"],"is_obsolete":false,"name":"Hermansky-Pudlak syndrome 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310746","GARD:16180","MEDGEN:934713","OMIM:617050","Orphanet:664511"],"synonyms":[{"name":"AP3D1 Hermansky-Pudlak syndrome","type":"exact"},{"name":"HPS10","type":"exact"},{"name":"Hermansky-Pudlak syndrome 10","type":"exact"},{"name":"Hermansky-Pudlak syndrome 10; HPS10","type":"exact"},{"name":"Hermansky-Pudlak syndrome caused by mutation in AP3D1","type":"exact"},{"name":"Hermansky-Pudlak syndrome type 10","type":"exact"}],"termid":"MONDO:0014885","terms_by_termid":{"MONDO:0014885":null},"xrefs":{"Monarch":{"xref_id":"0014885"}}}


id: PBO:0061202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOC2 like nucleolar associated transcriptional repressor pseudogene 2","termid":"PBO:0061202"}


id: PBO:0063716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5 pseudogene 4","termid":"PBO:0063716"}


id: GO:1901885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-hydroxybenzoyl-CoA.","definition_xrefs":["PMID:19757094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"2-hydroxybenzoyl-CoA metabolic process","synonyms":[{"name":"2-hydroxybenzoyl-CoA metabolism","type":"exact"}],"termid":"GO:1901885"}


id: MONDO:0002623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An osteosarcoma occurring in childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"osteosarcoma","termid":"MONDO:0009807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric osteosarcoma","secondary_identifiers":["NANDO:2200048","UMLS:C1332986","DOID:3361","MEDGEN:272464","NCIT:C6585"],"synonyms":[{"name":"childhood osteogenic sarcoma","type":"exact"},{"name":"childhood osteosarcoma","type":"exact"},{"name":"childhood osteosarcoma (disease)","type":"exact"},{"name":"osteosarcoma","type":"broad"},{"name":"osteosarcoma (disease) of childhood","type":"exact"},{"name":"paediatric osteosarcoma (disease)","type":"exact"},{"name":"pediatric osteosarcoma","type":"exact"},{"name":"pediatric osteosarcoma (disease)","type":"exact"}],"termid":"MONDO:0002623","xrefs":{"Monarch":{"xref_id":"0002623"}}}


id: GO:1904903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of an ESCRT III complex into its constituent components.","definition_xrefs":["GOC:PARL","GO_REF:0000079","GOC:TermGenie","PMID:20588296","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ESCRT complex disassembly","termid":"GO:1904896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ESCRT III complex disassembly","termid":"GO:1904903"}


id: MONDO:0022999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distichiasis heart congenital anomalies","termid":"MONDO:0022999","xrefs":{"Monarch":{"xref_id":"0022999"}}}


id: MONDO:0003550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An esophageal carcinoma characterized by the presence of distinguishable squamous and glandular carcinomatous components.","definition_xrefs":["NCIT:C27421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal squamous cell carcinoma","termid":"MONDO:0005580"},{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"esophageal adenosquamous carcinoma","secondary_identifiers":["MEDGEN:389165","DOID:5625","UMLS:C2063886"],"synonyms":[{"name":"esophageal adenosquamous cancer","type":"exact"},{"name":"esophageal adenosquamous carcinoma","type":"exact"},{"name":"esophagus adenosquamous carcinoma","type":"exact"},{"name":"oesophagus adenosquamous carcinoma","type":"exact"}],"termid":"MONDO:0003550","xrefs":{"Monarch":{"xref_id":"0003550"}}}


id: GO:0048634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"muscle organ development","termid":"GO:0007517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle organ development","termid":"GO:0048634"}


id: GO:0000390
data:
  {"annotated_genes":["SJAG_05025","SJAG_00206","SJAG_03301","SJAG_02560","SJAG_00597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57286,75304,78883,88097,104866],"is_not":false,"summary":null,"term":"GO:0000390"}]},"cv_name":"biological_process","definition":"Disassembly of a spliceosomal complex with the ATP-dependent release of the product RNAs, one of which is composed of the joined exons. In cis splicing, the other product is the excised sequence, often a single intron, in a lariat structure.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex disassembly","termid":"GO:0032988"},{"relation_name":"part_of","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00206":null,"SJAG_00597":null,"SJAG_02560":null,"SJAG_03301":null,"SJAG_05025":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"spliceosomal complex disassembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000392","GO:0000391"],"synonyms":[{"name":"U12-type spliceosome disassembly","type":"narrow"},{"name":"U2-type spliceosome disassembly","type":"narrow"},{"name":"spliceosome complex disassembly","type":"exact"},{"name":"spliceosome disassembly","type":"broad"}],"termid":"GO:0000390","terms_by_termid":{"GO:0000390":null}}


id: MONDO:0016791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial oxidative phosphorylation disorder due to mitochondrial DNA anomalies (obsolete MONDO:0016791)","secondary_identifiers":["Orphanet:254758"],"synonyms":[{"name":"OXPHOS disease due to mitochondrial DNA anomalies","type":"exact"},{"name":"OXPHOS disease due to mtDNA anomalies","type":"exact"},{"name":"mitochondrial oxidative phosphorylation disorder due to mtDNA anomalies","type":"exact"}],"termid":"MONDO:0016791","xrefs":{"Monarch":{"xref_id":"0016791"}}}


id: GO:0043840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-keto-4-methylthiobutyrate + L-phenylalanine = phenylpyruvate + L-methionine.","definition_xrefs":["PMID:12670965"],"gene_count":0,"genotype_count":0,"name":"obsolete branched-chain amino acid:2-keto-4-methylthiobutyrate aminotransferase activity (obsolete GO:0043840)","synonyms":[{"name":"BCAT","type":"related"},{"name":"branched chain amino acid:2-keto-4-methylthiobutyrate aminotransferase activity","type":"exact"},{"name":"branched-chain amino acid aminotransferase","type":"broad"},{"name":"branched-chain-amino-acid:2-keto-4-methylthiobutyrate aminotransferase activity","type":"exact"}],"termid":"GO:0043840"}


id: PBO:0064648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase with EF-hand domain 2","termid":"PBO:0064648"}


id: FYPO:0004354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased protein phosphorylation during mitotic G1 phase","synonyms":[{"name":"increased protein phosphorylation during mitotic G1 phase during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during mitotic G1-phase","type":"exact"},{"name":"increased protein/peptide phosphorylation during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0004354"}


id: PBO:0055133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2552","termid":"PBO:0055133"}


id: SO:0002128
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Mitochondrial rRNA is an RNA component of the small or large subunits of mitochondrial ribosomes.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA","termid":"SO:0000252"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_rRNA","synonyms":[{"name":"Mt rRNA","type":"exact"},{"name":"Mt_rRNA","type":"exact"},{"name":"mitochondrial rRNA","type":"exact"},{"name":"mitochondrial_rRNA","type":"exact"}],"termid":"SO:0002128"}


id: MONDO:0016369
data:
  {"annotated_genes":["SJAG_02200","SJAG_04995"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85398,85399],"is_not":false,"summary":null,"term":"MONDO:0016369"}]},"cv_name":"mondo","definition":"Rothmund-Thomson syndrome type 2 is a subform of Rothmund-Thomson syndrome (RTS) presenting with a characteristic facial rash (poikiloderma) and frequently associated with short stature, sparse scalp hair, sparse or absent eyelashes and/or eyebrows, congenital bone defects and an increased risk of osteosarcoma in childhood and squamous cell carcinoma later in life.","definition_xrefs":["Orphanet:221016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"Rothmund-Thomson syndrome","termid":"MONDO:0010002"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02200":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"Rothmund-Thomson syndrome type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C178827","MEDGEN:1684753","icd11.foundation:2111040755","GARD:17135","OMIM:268400","UMLS:C5203410"],"synonyms":[{"name":"RTS2","type":"exact"},{"name":"Rothmund-Thomson syndrome, type 2","type":"exact"},{"name":"poikiloderma of Rothmund-Thomson type 2","type":"exact"}],"termid":"MONDO:0016369","terms_by_termid":{"MONDO:0016369":null},"xrefs":{"Monarch":{"xref_id":"0016369"}}}


id: MONDO:0003713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"angiokeratoma","termid":"MONDO:0003143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angiokeratoma circumscriptum","secondary_identifiers":["icd11.foundation:225334653","SCTID:21848000","UMLS:C0263638","NCIT:C7751","DOID:5949","MEDGEN:120485"],"termid":"MONDO:0003713","xrefs":{"Monarch":{"xref_id":"0003713"}}}


id: PBO:0082875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Covalently linked cell wall glycoprotein; present in the inner layer of the cell wall","termid":"PBO:0082875"}


id: MONDO:0800356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"short rib dysplasia","termid":"MONDO:0019691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short-rib thoracic dysplasia 7/20 with polydactyly, digenic","secondary_identifiers":["MEDGEN:1662086","UMLS:C4747658"],"synonyms":[{"name":"SRTD7/20","type":"exact"}],"termid":"MONDO:0800356","xrefs":{"Monarch":{"xref_id":"0800356"}}}


id: SO:0001583
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant, that changes one or more bases, resulting in a different amino acid sequence but where the length is preserved.","definition_xrefs":["EBI:fc","EBI:gr","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonsynonymous_variant","termid":"SO:0001992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"missense_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http://vat.gersteinlab.org/formats.php","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","loinc:LA6698-0","SO:0001783","http://en.wikipedia.org/wiki/Missense_mutation","SO:0001584","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"ANNOVAR:nonsynonymous SNV","type":"related"},{"name":"Jannovar:missense_variant","type":"exact"},{"name":"Seattleseq:missense","type":"exact"},{"name":"Seattleseq:missense-near-splice","type":"related"},{"name":"VAAST:missense_variant","type":"exact"},{"name":"VAAST:non_synonymous_codon","type":"related"},{"name":"VAT:nonsynonymous","type":"exact"},{"name":"VEP:missense_variant","type":"exact"},{"name":"missense","type":"exact"},{"name":"missense codon","type":"exact"},{"name":"snpEff:NON_SYNONYMOUS_CODING","type":"exact"}],"termid":"SO:0001583"}


id: PBO:0053129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactase","termid":"PBO:0053129"}


id: PBO:0081895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 846","termid":"PBO:0081895"}


id: GO:0051928
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"positively_regulates","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of calcium ion transport","type":"narrow"},{"name":"positive regulation of calcium transport","type":"exact"},{"name":"stimulation of calcium ion transport","type":"narrow"},{"name":"up regulation of calcium ion transport","type":"exact"},{"name":"up-regulation of calcium ion transport","type":"exact"},{"name":"upregulation of calcium ion transport","type":"exact"}],"termid":"GO:0051928","terms_by_termid":{"GO:1905665":null}}


id: PBO:0054186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1561","termid":"PBO:0054186"}


id: PBO:0034282
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_starts_with","termid":"PBO:0034282"}


id: PBO:0073152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24 homolog D, COPII coat complex component","termid":"PBO:0073152"}


id: PBO:0110410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC39A1 pseudogene 1","termid":"PBO:0110410"}


id: MONDO:0007216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly type A2 (BDA2) is a congenital malformation characterized by shortening (hypoplasia or aplasia) of the middle phalanges of the index finger and, sometimes, of the little finger.","definition_xrefs":["Orphanet:93396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A2","secondary_identifiers":["GARD:979","MESH:C537089","UMLS:C1832702","icd11.foundation:594491464","SCTID:720569006","OMIM:112600","MEDGEN:318690","DOID:0110965"],"synonyms":[{"name":"BDA2","type":"exact"},{"name":"Brachymesophalangy 2","type":"related"},{"name":"Brachymesophalangy type 2","type":"related"},{"name":"Mohr-Wriedt type brachydactyly","type":"exact"},{"name":"brachydactyly, Mohr-Wriedt type","type":"exact"},{"name":"brachydactyly, type A2","type":"related"},{"name":"brachymesophalangy II","type":"exact"}],"termid":"MONDO:0007216","xrefs":{"Monarch":{"xref_id":"0007216"}}}


id: PBO:0000682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase (predicted)","termid":"PBO:0000682"}


id: MONDO:0010311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Becker muscular dystrophy (BMD) is a neuromuscular disease characterized by progressive muscle wasting and weakness due to degeneration of skeletal, smooth and cardiac muscle.","definition_xrefs":["Orphanet:98895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Becker muscular dystrophy","secondary_identifiers":["GARD:5900","MedDRA:10059117","NANDO:2200865","NCIT:C84587","UMLS:C0917713","MESH:C570377","DOID:9883","NANDO:1200489","icd11.foundation:690532643","MEDGEN:182959","OMIM:300376","SCTID:387732009"],"synonyms":[{"name":"BMD","type":"exact"},{"name":"Becker dystrophinopathy","type":"exact"},{"name":"Becker muscular dystrophy","type":"exact"},{"name":"Becker muscular dystrophy, X-linked recessive","type":"exact"},{"name":"Becker's muscular dystrophy","type":"related"},{"name":"benign congenital myopathy","type":"exact"},{"name":"benign pseudohypertrophic muscular dystrophy","type":"exact"},{"name":"muscular dystrophy pseudohypertrophic progressive, Becker type","type":"related"},{"name":"muscular dystrophy, Becker type","type":"related"},{"name":"muscular dystrophy, pseudohypertrophic progressive, Becker type","type":"related"}],"termid":"MONDO:0010311","xrefs":{"Monarch":{"xref_id":"0010311"}}}


id: FYPO:0008015
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of glucose into the cell is decreased with respect to wild-type.","definition_xrefs":["PomBase:mlr","PMID:35781263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glucose import","termid":"FYPO:0001827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased glucose import","termid":"FYPO:0008015"}


id: GO:0003348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cardiac endothelial cell.","definition_xrefs":["GOC:dph","PMID:18722343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"is_a","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac endothelial cell differentiation","termid":"GO:0003348"}


id: MONDO:0014547
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  {"annotated_genes":["SJAG_04856"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85751],"is_not":false,"summary":null,"term":"MONDO:0014547"}]},"cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the NARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 24","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:444458","DOID:0111485","MEDGEN:864080","GARD:17765","OMIM:616239","UMLS:C4015643"],"synonyms":[{"name":"COXPD24","type":"exact"},{"name":"NARS2 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 24","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in NARS2","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 24","type":"exact"}],"termid":"MONDO:0014547","terms_by_termid":{"MONDO:0014547":null},"xrefs":{"Monarch":{"xref_id":"0014547"}}}


id: PBO:0080181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDAC2 pseudogene 2","termid":"PBO:0080181"}


id: PBO:0075658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin beta, erythrocytic","termid":"PBO:0075658"}


id: GO:0031029
data:
  {"annotated_genes":["SJAG_00229","SJAG_03048","SJAG_00526","SJAG_03681","SJAG_00082","SJAG_01790","SJAG_04943","SJAG_06270","SJAG_00078","SJAG_01805","SJAG_04776","SJAG_03936","SJAG_03508","SJAG_00883","SJAG_03592","SJAG_02169","SJAG_00600","SJAG_02514","SJAG_03631","SJAG_04455","SJAG_01464","SJAG_03353","SJAG_01386"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90288,104848,113751],"is_not":false,"summary":null,"term":"GO:0031029"},{"annotations":[107903,93787,107594,73135,92061,91052,93173,116291,105396,95971,93258,110540,107460,101612,99925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[90326,94137,87857,102726,110898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of septation initiation signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"regulates","term_name":"septation initiation signaling","termid":"GO:0031028"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00082":null,"SJAG_00229":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00883":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_01790":null,"SJAG_01805":null,"SJAG_02169":null,"SJAG_02514":null,"SJAG_03048":null,"SJAG_03353":null,"SJAG_03508":null,"SJAG_03592":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03936":null,"SJAG_04455":null,"SJAG_04776":null,"SJAG_04943":null,"SJAG_06270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of septation initiation signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of septation initiation network","type":"exact"},{"name":"regulation of septation initiation signaling cascade","type":"related"},{"name":"regulation of septation initiation signalling","type":"exact"}],"termid":"GO:0031029","terms_by_termid":{"GO:0031029":null,"GO:0031030":null,"GO:0031031":null}}


id: GO:1904864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of beta-catenin-TCF complex assembly.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:bf","PMID:18936100","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of beta-catenin-TCF complex assembly","termid":"GO:1904863"},{"relation_name":"negatively_regulates","term_name":"beta-catenin-TCF complex assembly","termid":"GO:1904837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"negative regulation of beta-catenin-TCF complex assembly","synonyms":[{"name":"down regulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"down regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"down regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"down regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"down regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"down regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"down regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"down regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"down-regulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"down-regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"down-regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"down-regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"down-regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"down-regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"down-regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"down-regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"downregulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"downregulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"downregulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"downregulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"downregulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"downregulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"downregulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"downregulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"inhibition of beta-catenin-TCF complex assembly","type":"narrow"},{"name":"inhibition of beta-catenin-TCF complex formation","type":"narrow"},{"name":"inhibition of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"inhibition of beta-catenin/LEF complex formation","type":"narrow"},{"name":"inhibition of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"inhibition of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"inhibition of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"inhibition of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"negative regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"negative regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"negative regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"negative regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"negative regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"negative regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"negative regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"}],"termid":"GO:1904864"}


id: MONDO:0006496
data:
  {"annotated_genes":["SJAG_04537","SJAG_04506","SJAG_04123","SJAG_02050","SJAG_03866","SJAG_06022","SJAG_00660","SJAG_04665","SJAG_04757","SJAG_04110","SJAG_01537","SJAG_04566","SJAG_01854","SJAG_02658","SJAG_04325","SJAG_01530","SJAG_02322","SJAG_01159","SJAG_03457","SJAG_00885","SJAG_00199","SJAG_02306","SJAG_04145","SJAG_02615","SJAG_04183","SJAG_04816","SJAG_01857","SJAG_03895","SJAG_01848","SJAG_00308","SJAG_04292","SJAG_05289","SJAG_00564","SJAG_04913","SJAG_04628","SJAG_00773","SJAG_03320"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85352,85353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014702"},{"annotations":[87322,87321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014975"},{"annotations":[87588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030669"},{"annotations":[85771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014567"},{"annotations":[85985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009748"},{"annotations":[86038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011489"},{"annotations":[87390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011532"},{"annotations":[85512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010043"},{"annotations":[85516,85517,85515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012256"},{"annotations":[85402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012476"},{"annotations":[85522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012453"},{"annotations":[87373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012866"},{"annotations":[86643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012787"},{"annotations":[86832,86831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008438"},{"annotations":[87091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012928"},{"annotations":[85620,85618,85619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014018"},{"annotations":[85617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014020"},{"annotations":[85977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014305"},{"annotations":[85961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014282"},{"annotations":[85449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014644"},{"annotations":[86451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014882"},{"annotations":[86822,86823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011006"},{"annotations":[85465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014062"},{"annotations":[85433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014679"},{"annotations":[86864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024528"},{"annotations":[85498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012238"},{"annotations":[85867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013117"},{"annotations":[86679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009783"},{"annotations":[85460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014656"},{"annotations":[86750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020845"},{"annotations":[86392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957993"},{"annotations":[87076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012651"},{"annotations":[86862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957221"},{"annotations":[86372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957958"},{"annotations":[87030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032906"},{"annotations":[86374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030482"},{"annotations":[86418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030512"},{"annotations":[87169,87170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031019"},{"annotations":[86667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957308"},{"annotations":[86668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957309"}]},"cv_name":"mondo","definition":"A general term most often used to describe severe or complete loss of muscle strength due to motor system disease from the level of the cerebral cortex to the muscle fiber. 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id: PBO:0109142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic, EGF-CFC family member 1B","termid":"PBO:0109142"}


id: GO:0017077
data:
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id: MONDO:0016465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete multiple intestinal atresia (obsolete MONDO:0016465)","termid":"MONDO:0016465","xrefs":{"Monarch":{"xref_id":"0016465"}}}


id: GO:0102844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-16:1-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-16:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-16:1-monogalactosyldiacylglycerol desaturase activity (SN2-16:2 forming) (obsolete GO:0102844)","termid":"GO:0102844"}


id: PBO:0083123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dolichol-P-Man dependent alpha(1-3) mannosyltransferase; involved in synthesis of dolichol-linked oligosaccharide donor for N-linked glycosylation of proteins; G353A missense mutation in human ortholog ALG3 implicated in carbohydrate deficient glycoprotein syndrome type IV, which is characterized by microcephaly, severe epilepsy, minimal psychomotor development, partial deficiency of sialic acids in serum glycoproteins; wild-type human ALG3 can complement yeast alg3 mutant","termid":"PBO:0083123"}


id: FYPO:0007117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to leucine starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to leucine starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to leucine starvation","type":"related"},{"name":"decreased RNA level during cellular response to leucine depletion","type":"exact"},{"name":"decreased RNA level during cellular response to leucine deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to leucine starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to leucine starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during leucine starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to leucine starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to leucine starvation","type":"exact"},{"name":"reduced RNA level during cellular response to leucine starvation","type":"exact"}],"termid":"FYPO:0007117"}


id: PBO:0056795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"milk fat globule EGF and factor V/VIII domain containing","termid":"PBO:0056795"}


id: PBO:0072332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 18","termid":"PBO:0072332"}


id: GO:0003929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete RAN small monomeric GTPase activity (obsolete GO:0003929)","synonyms":[{"name":"RAN small monomeric GTPase activity","type":"exact"}],"termid":"GO:0003929"}


id: PBO:0054599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2003","termid":"PBO:0054599"}


id: MONDO:0009018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Central cloudy dystrophy of François is a very rare form of stromal corneal dystrophy characterized by polygonal or rounded stromal opacities surrounded by clear tissue, and generally no effect on vision.","definition_xrefs":["Orphanet:98972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stromal corneal dystrophy","termid":"MONDO:0020213"},{"relation_name":"is_a","term_name":"posterior corneal dystrophy","termid":"MONDO:0020214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"central cloudy dystrophy of François","secondary_identifiers":["GARD:16881","MESH:C563262","MEDGEN:302006","OMIM:217600","UMLS:C1622427","SCTID:419074008"],"synonyms":[{"name":"CCDF","type":"exact"},{"name":"central cloudy corneal dystrophy of François","type":"exact"},{"name":"central cloudy dystrophy of Francois","type":"exact"},{"name":"central cloudy dystrophy of François","type":"exact"},{"name":"corneal dystrophy, central type","type":"related"}],"termid":"MONDO:0009018","xrefs":{"Monarch":{"xref_id":"0009018"}}}


id: GO:0014715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process taking place in the trunk whereby the developmental fate of a cell becomes restricted such that it will develop into a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast fate commitment","termid":"GO:0048625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate commitment in trunk","termid":"GO:0014715"}


id: PBO:0047362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 16","termid":"PBO:0047362"}


id: GO:1903422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle recycling.","definition_xrefs":["PMID:22745285","GO_REF:0000058","GOC:pad","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle recycling","termid":"GO:1903421"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle recycling","termid":"GO:0036465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle recycling","synonyms":[{"name":"down regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"down regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"down regulation of synaptic vesicle recycling","type":"exact"},{"name":"down-regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"down-regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"down-regulation of synaptic vesicle recycling","type":"exact"},{"name":"downregulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"downregulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"downregulation of synaptic vesicle recycling","type":"exact"},{"name":"inhibition of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"inhibition of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"inhibition of synaptic vesicle recycling","type":"narrow"},{"name":"negative regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"negative regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"}],"termid":"GO:1903422"}


id: PR:P56289
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tif51 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P56289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.10c","synonyms":[{"name":"Spom972h-tif51","type":"exact"},{"name":"eIF-5A-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P56289"}


id: PBO:0070029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1326, pseudogene","termid":"PBO:0070029"}


id: GO:2000292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defecation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"is_a","term_name":"regulation of excretion","termid":"GO:0044062"},{"relation_name":"regulates","term_name":"defecation","termid":"GO:0030421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of defecation","termid":"GO:2000292"}


id: MONDO:0010205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Wolman disease with hypolipoproteinemia and acanthocytosis (obsolete MONDO:0010205)","termid":"MONDO:0010205","xrefs":{"Monarch":{"xref_id":"0010205"}}}


id: GO:0038188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by cholecystokinin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:jc","PMID:11181948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cholecystokinin signaling pathway","secondary_identifiers":["Wikipedia:Cholecystokinin"],"synonyms":[{"name":"CCK signaling","type":"exact"},{"name":"cholecystokinin receptor signaling pathway","type":"related"}],"termid":"GO:0038188"}


id: GO:0032413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the activity of an ion transporter.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transporter activity","termid":"GO:0032410"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transmembrane transport","termid":"GO:0034766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of ion transmembrane transporter activity","synonyms":[{"name":"down regulation of ion transporter activity","type":"exact"},{"name":"down-regulation of ion transporter activity","type":"exact"},{"name":"downregulation of ion transporter activity","type":"exact"},{"name":"inhibition of ion transporter activity","type":"narrow"},{"name":"negative regulation of ion transporter activity","type":"exact"}],"termid":"GO:0032413"}


id: GO:0008050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of a female, for the purpose of attracting a sexual partner.","definition_xrefs":["GOC:bf","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"courtship behavior","termid":"GO:0007619"},{"relation_name":"is_a","term_name":"female mating behavior","termid":"GO:0060180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female courtship behavior","synonyms":[{"name":"female courtship behaviour","type":"exact"}],"termid":"GO:0008050"}


id: PBO:0117171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHSY3 antisense RNA 1","termid":"PBO:0117171"}


id: PBO:0067967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 269","termid":"PBO:0067967"}


id: GO:0120229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a motile cilium.","definition_xrefs":["PMID:27486780","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to motile cilium","synonyms":[{"name":"protein localization to nonmotile primary cilium","type":"related"}],"termid":"GO:0120229"}


id: GO:0071475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperosmotic salinity response","termid":"GO:0042538"},{"relation_name":"is_a","term_name":"cellular response to salt stress","termid":"GO:0071472"},{"relation_name":"is_a","term_name":"cellular hyperosmotic response","termid":"GO:0071474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hyperosmotic salinity response","synonyms":[{"name":"cellular response to hyperosmotic salt stress","type":"exact"}],"termid":"GO:0071475"}


id: PATO:0000155
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000155 relative threshold (obsolete PATO:0000155)","termid":"PATO:0000155"}


id: MONDO:0800144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune disease that is characterized by a lack of PD-1 on patient peripheral blood mononuclear cells (PBMCs) and reduced IFN production in response to mycobacterial stimuli.","definition_xrefs":["PMID:34183838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune pulmonary disease due to PD-1 deficiency","termid":"MONDO:0800144","xrefs":{"Monarch":{"xref_id":"0800144"}}}


id: PBO:0066834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 133","termid":"PBO:0066834"}


id: SO:0001622
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant that is located within the UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon_variant","termid":"SO:0001791"},{"relation_name":"is_a","term_name":"coding_transcript_variant","termid":"SO:0001968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR_variant","synonyms":[{"name":"UTR variant","type":"exact"},{"name":"UTR_","type":"exact"}],"termid":"SO:0001622"}


id: PBO:0072663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 4","termid":"PBO:0072663"}


id: PBO:0064689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 25","termid":"PBO:0064689"}


id: GO:0090037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of a series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein kinase C signaling","termid":"GO:0090036"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"protein kinase C signaling","termid":"GO:0070528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of protein kinase C signaling","synonyms":[{"name":"positive regulation of protein kinase C signaling cascade","type":"related"},{"name":"positive regulation of protein kinase C signalling cascade","type":"exact"}],"termid":"GO:0090037"}


id: PBO:0063046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paralemmin 2","termid":"PBO:0063046"}


id: MONDO:0001745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine corpus leiomyoma","termid":"MONDO:0007886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subserous uterine fibroid","secondary_identifiers":["MEDGEN:509503","DOID:13560","UMLS:C0153995","SCTID:95280005","ICD9:218.2"],"synonyms":[{"name":"subserous leiomyoma of uterus","type":"exact"}],"termid":"MONDO:0001745","xrefs":{"Monarch":{"xref_id":"0001745"}}}


id: PBO:0081443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 300","termid":"PBO:0081443"}


id: PBO:0088664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stm1/Oga1 family protein Smp4","termid":"PBO:0088664"}


id: PBO:0068617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 69, pseudogene","termid":"PBO:0068617"}


id: GO:0010829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of glucose transport across a membrane. Glucose transport is the directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of D-glucose transmembrane transport","termid":"GO:0010827"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"negatively_regulates","term_name":"D-glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of D-glucose transmembrane transport","synonyms":[{"name":"negative regulation of glucose transmembrane transport","type":"exact"},{"name":"negative regulation of glucose transport","type":"related"}],"termid":"GO:0010829"}


id: PBO:0074599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 10B","termid":"PBO:0074599"}


id: GO:1904303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maternal process involved in parturition.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:1849751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of maternal process involved in parturition","termid":"GO:1904301"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"maternal process involved in parturition","termid":"GO:0060137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of maternal process involved in parturition","synonyms":[{"name":"activation of maternal process involved in parturition","type":"narrow"},{"name":"up regulation of maternal process involved in parturition","type":"exact"},{"name":"up-regulation of maternal process involved in parturition","type":"exact"},{"name":"upregulation of maternal process involved in parturition","type":"exact"}],"termid":"GO:1904303"}


id: PBO:0001971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp6","termid":"PBO:0001971"}


id: GO:0050603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH(2) + O2 + thiophene-2-carbonyl-CoA = 5-hydroxythiophene-2-carbonyl-CoA + A + H2O + H+.","definition_xrefs":["EC:1.14.99.35","RHEA:18929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"thiophene-2-carbonyl-CoA monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r1235","MetaCyc:1.14.99.35-RXN","KEGG_REACTION:R05742"],"synonyms":[{"name":"thiophene-2-carbonyl-CoA, hydrogen-donor:oxygen oxidoreductase activity","type":"related"},{"name":"thiophene-2-carboxyl-CoA dehydrogenase activity","type":"related"},{"name":"thiophene-2-carboxyl-CoA hydroxylase activity","type":"related"},{"name":"thiophene-2-carboxyl-CoA monooxygenase activity","type":"related"}],"termid":"GO:0050603"}


id: PR:O94331
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An orotate phosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orotate phosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.15","secondary_identifiers":["UniProtKB:O94331"],"synonyms":[{"name":"OPRT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OPRTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pyrE","type":"exact"}],"termid":"PR:O94331"}


id: MONDO:1012009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal amyloidosis, non-human animal","termid":"MONDO:1011903"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal amyloidosis, dog","secondary_identifiers":["OMIA:000040-9615"],"termid":"MONDO:1012009","xrefs":{"Monarch":{"xref_id":"1012009"}}}


id: MONDO:0017478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amelia of upper limb","termid":"MONDO:0017437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"amelia of upper limb, unilateral","secondary_identifiers":["icd11.foundation:790781203","Orphanet:295053"],"termid":"MONDO:0017478","xrefs":{"Monarch":{"xref_id":"0017478"}}}


id: GO:1903256
data:
  {"annotated_genes":["SJAG_00832","SJAG_03856"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111915,103969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving selenoneine.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","PMID:24828577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"},{"relation_name":"is_a","term_name":"modified histidine metabolic process","termid":"GO:0052701"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00832":null,"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"selenoneine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-selenoneine metabolic process","type":"narrow"},{"name":"selenoneine metabolism","type":"exact"}],"termid":"GO:1903256","terms_by_termid":{"GO:1903257":null}}


id: MONDO:1012003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneal sequestra, non-human animal","secondary_identifiers":["OMIA:002574"],"termid":"MONDO:1012003","xrefs":{"Monarch":{"xref_id":"1012003"}}}


id: PATO:0000968
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000968 albino value (obsolete PATO:0000968)","termid":"PATO:0000968"}


id: GO:0089700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase D, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:dos","GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete protein kinase D signaling (obsolete GO:0089700)","synonyms":[{"name":"PKD signal transduction","type":"exact"},{"name":"PKD signaling cascade","type":"related"},{"name":"protein kinase D signal transduction","type":"exact"},{"name":"protein kinase D signaling cascade","type":"related"},{"name":"protein kinase D signalling cascade","type":"related"}],"termid":"GO:0089700"}


id: PBO:0011138
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHOsphate metabolism","termid":"PBO:0011138"}


id: PBO:0046498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERH pseudogene 1","termid":"PBO:0046498"}


id: PBO:0063134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate androgen-regulated transcript 1","termid":"PBO:0063134"}


id: PBO:0005816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Csl4 (predicted)","termid":"PBO:0005816"}


id: MONDO:0011889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease type 2I (CMT2I) is a form of axonal Charcot-Marie-Tooth disease, a peripheral sensorimotor neuropathy, characterized by a late onset with severe sensory loss (paresthesia and hypoesthesia) associated with distal weakness, mainly of the legs, and absent or reduced deep tendon reflexes.","definition_xrefs":["Orphanet:99942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease dominant intermediate D","termid":"MONDO:0011909"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 2I","secondary_identifiers":["DOID:0110158","SCTID:717013009","UMLS:C3888087","GARD:9197","icd11.foundation:1858507973","MEDGEN:854756","OMIM:607677"],"synonyms":[{"name":"CMT 2I","type":"related"},{"name":"CMT2I","type":"exact"},{"name":"Charcot Marie Tooth disease type 2I","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2I","type":"related"},{"name":"Charcot-Marie-Tooth disease, type 2I","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2I","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2I","type":"related"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2I","type":"related"}],"termid":"MONDO:0011889","xrefs":{"Monarch":{"xref_id":"0011889"}}}


id: GO:0002055
data:
  {"annotated_genes":["SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74300],"is_not":false,"summary":null,"term":"GO:0002055"}]},"cv_name":"molecular_function","definition":"Binding to adenine, a purine base.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase binding","termid":"GO:0002060"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"adenine binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"6-aminopurine binding","type":"exact"}],"termid":"GO:0002055","terms_by_termid":{"GO:0002055":null}}


id: MONDO:0006045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant glandular epithelial neoplasm characterized by the presence of clear and hobnail cells. It is highly associated with ovarian endometriosis, pelvic endometriosis and paraendocrine hypercalcemia.","definition_xrefs":["NCIT:C40078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian clear cell cancer","termid":"MONDO:0000548"},{"relation_name":"is_a","term_name":"ovarian adenocarcinoma","termid":"MONDO:0002752"},{"relation_name":"is_a","term_name":"clear cell adenocarcinoma","termid":"MONDO:0005004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian clear cell adenocarcinoma","secondary_identifiers":["SCTID:763131005","icd11.foundation:315825558","Orphanet:398971","EFO:1000042","GARD:21652","UMLS:C1518693","DOID:5304","MEDGEN:276659"],"synonyms":[{"name":"clear cell adenocarcinoma of ovary","type":"exact"},{"name":"clear cell adenocarcinoma of the ovary","type":"related"},{"name":"ovarian clear cell adenocarcinoma","type":"exact"},{"name":"ovary clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0006045","xrefs":{"Monarch":{"xref_id":"0006045"}}}


id: MONDO:0005828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection caused by Listeria monocytogenes. It occurs in newborns, elderly, and immunocompromised patients. The bacteria are transmitted through ingestion of contaminated food. Clinical manifestations include fever, muscle pain, respiratory distress, nausea, diarrhea, neck stiffness, irritability, seizures, and lethargy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"listeriosis","secondary_identifiers":["GARD:6915","ICD9:027.0","EFO:0007347","ICD10CM:A32","MEDGEN:9788","MedDRA:10024641","MESH:D008088","icd11.foundation:419706488","UMLS:C0023860","NCIT:C82994","Orphanet:533","DOID:11573"],"synonyms":[{"name":"Listeria infection","type":"exact"},{"name":"Listeria monocytogenes caused disease or disorder","type":"exact"},{"name":"Listeria monocytogenes disease or disorder","type":"exact"},{"name":"Listeria monocytogenes infection","type":"related"},{"name":"Listeria monocytogenes infectious disease","type":"exact"},{"name":"infection by Listeria monocytogenes","type":"exact"}],"termid":"MONDO:0005828","xrefs":{"Monarch":{"xref_id":"0005828"}}}


