# terms

id: GO:0032152
data:
  {"annotated_genes":["SJAG_01769","SJAG_03688","SJAG_00663","SJAG_04470"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94833,100449,106370,116355],"is_not":false,"summary":null,"term":"GO:0032152"}]},"cv_name":"cellular_component","definition":"A heterooligomeric septin complex that acts during meiotic cell division.","definition_xrefs":["PMID:16009555","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin complex","termid":"GO:0031105"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01769":null,"SJAG_03688":null,"SJAG_04470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"meiotic septin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032152","terms_by_termid":{"GO:0032152":null}}


id: MONDO:0010225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dent disease type 1 is a type of Dent disease with predominantly renal manifestations.","definition_xrefs":["Orphanet:93622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Dent disease","termid":"MONDO:0015612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Dent disease type 1","secondary_identifiers":["icd11.foundation:1984074789","MEDGEN:336322","OMIM:300009","UMLS:C1848336","SCTID:717789008","DOID:0081453","GARD:1804"],"synonyms":[{"name":"CLCN5 Dent disease","type":"exact"},{"name":"DENT disease 1","type":"related"},{"name":"Dent disease caused by mutation in CLCN5","type":"exact"},{"name":"Dent disease type 1","type":"exact"},{"name":"dent disease 1, X-linked recessive","type":"exact"},{"name":"nephrolithiasis 2","type":"related"},{"name":"nephrolithiasis type 1","type":"exact"},{"name":"nephrolithiasis, hypercalciuric, X-linked","type":"related"},{"name":"urolithiasis, hypercalciuric, X-linked","type":"related"}],"termid":"MONDO:0010225","xrefs":{"Monarch":{"xref_id":"0010225"}}}


id: GO:0103037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + NADP = H+ + L-glyceraldehyde 3-phosphate + NADPH.","definition_xrefs":["PMID:18620424","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-glyceraldehyde 3-phosphate reductase activity","secondary_identifiers":["MetaCyc:RXN0-5410"],"termid":"GO:0103037"}


id: GO:0060209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The estrous cycle phase in which a female is sexually receptive.","definition_xrefs":["GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"estrous cycle phase","termid":"GO:0060206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"estrus","synonyms":[{"name":"oestrus","type":"exact"}],"termid":"GO:0060209"}


id: PBO:0082349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; has strong preference for dsRNA; remodels RNA-protein complex (RNP) to facilitate efficient transcription termination ; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may be involved in suppression of transcription from cryptic initiation sites","termid":"PBO:0082349"}


id: GO:1902445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any regulation of mitochondrial membrane permeability that is involved in programmed necrotic cell death.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis","PMID:22493254","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane permeability","termid":"GO:0046902"},{"relation_name":"part_of","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial membrane permeability involved in programmed necrotic cell death","synonyms":[{"name":"regulation of transport across mitochondrial membrane involved in programmed necrotic cell death","type":"exact"}],"termid":"GO:1902445"}


id: PBO:0079448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCL1 upstream neural differentiation-associated RNA","termid":"PBO:0079448"}


id: PBO:0083228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps with YCR047C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083228"}


id: MONDO:0009960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inflammatory bowel disease in which the cause of the disease is a mutation in the NOD2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 1","secondary_identifiers":["DOID:0110892","ICD9:555.9","SCTID:34000006","OMIM:266600"],"synonyms":[{"name":"Crohn disease","type":"related"},{"name":"Crohn disease-associated growth failure","type":"exact"},{"name":"Crohn disease-associated growth failure, susceptibility to","type":"related"},{"name":"IBD1","type":"exact"},{"name":"NOD2 inflammatory bowel disease","type":"exact"},{"name":"inflammatory bowel disease (Crohn disease) 1","type":"exact"},{"name":"inflammatory bowel disease 1","type":"exact"},{"name":"inflammatory bowel disease 1, Crohn disease","type":"exact"},{"name":"inflammatory bowel disease caused by mutation in NOD2","type":"exact"},{"name":"inflammatory bowel disease type 1","type":"exact"},{"name":"paediatric ulcerative colitis","type":"related"},{"name":"pediatric ulcerative colitis","type":"related"},{"name":"regional enteritis","type":"related"},{"name":"ulcerative colitis","type":"related"},{"name":"ulcerative colitis, paediatric","type":"related"},{"name":"ulcerative colitis, pediatric","type":"related"}],"termid":"MONDO:0009960","xrefs":{"Monarch":{"xref_id":"0009960"}}}


id: PBO:0065423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMB8 antisense RNA 1 (head to head)","termid":"PBO:0065423"}


id: PBO:0078619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM67 antisense RNA 1","termid":"PBO:0078619"}


id: PBO:0078747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 10B","termid":"PBO:0078747"}


id: PBO:0065594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 10","termid":"PBO:0065594"}


id: GO:0015956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a bis(5'-nucleosidyl) oligophosphate, a compound formed of two nucleosides joined together through their 5' carbons by a chain of phosphate molecules.","definition_xrefs":["PMID:10970777","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"bis(5'-nucleosidyl) oligophosphate metabolic process","synonyms":[{"name":"bis(5'-nucleosidyl) oligophosphate metabolism","type":"exact"}],"termid":"GO:0015956"}


id: PBO:0081456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 322 pseudogene 1","termid":"PBO:0081456"}


id: FYPO:0001498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cytochalasin B. Cells stop growing (and may die) at a concentration of cytochalasin B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to cytochalasin B","synonyms":[{"name":"hypersensitive to cytochalasin B","type":"exact"},{"name":"sensitive to cytochalasin B during mitotic cell cycle","type":"related"},{"name":"sensitive to cytochalasin B during vegetative growth","type":"exact"}],"termid":"FYPO:0001498"}


id: FYPO:0001747
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of nickel ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal nickel import","synonyms":[{"name":"abnormal cellular nickel import","type":"exact"},{"name":"abnormal nickel cation import","type":"exact"},{"name":"abnormal nickel import across plasma membrane","type":"exact"},{"name":"abnormal nickel import during mitotic cell cycle","type":"related"},{"name":"abnormal nickel import during vegetative growth","type":"exact"},{"name":"abnormal nickel import into cell","type":"exact"},{"name":"abnormal nickel ion import","type":"exact"}],"termid":"FYPO:0001747"}


id: GO:0060917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of (1->6)-beta-D-glucans.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta-glucan biosynthetic process","termid":"GO:0032951"},{"relation_name":"regulates","term_name":"(1->6)-beta-D-glucan biosynthetic process","termid":"GO:0006078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of (1->6)-beta-D-glucan biosynthetic process","synonyms":[{"name":"regulation of 1,6-beta-glucan biosynthetic process","type":"exact"}],"termid":"GO:0060917"}


id: MONDO:0022888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"craniostenosis cataract","termid":"MONDO:0022888","xrefs":{"Monarch":{"xref_id":"0022888"}}}


id: PBO:0042684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein gamma","termid":"PBO:0042684"}


id: GO:0033781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + H+ + NADPH + O2 = (24S)-24-hydroxycholesterol + H2O + NADP+.","definition_xrefs":["EC:1.14.14.25","RHEA:22716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cholesterol 24-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-192061","KEGG_REACTION:R07207","MetaCyc:1.14.13.98-RXN"],"synonyms":[{"name":"CYP46","type":"related"},{"name":"CYP46A1","type":"related"},{"name":"cholesterol 24-monooxygenase activity","type":"related"},{"name":"cholesterol 24S-hydroxylase activity","type":"related"},{"name":"cholesterol,NADPH:oxygen oxidoreductase (24-hydroxylating) activity","type":"related"},{"name":"cytochrome P450 46A1","type":"related"}],"termid":"GO:0033781"}


id: MONDO:0016949
data:
  {"annotated_genes":["SJAG_01286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"}]},"cv_name":"mondo","definition":"Chromosome 16p duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the short arm (p) of chromosome 16. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 16p duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 16","termid":"MONDO:0016934"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01286":null},"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:262794","UMLS:C0795861","GARD:5315","icd11.foundation:325064766","MEDGEN:208643"],"synonyms":[{"name":"16p duplication","type":"related"},{"name":"16p trisomy","type":"related"},{"name":"Duplication 16p","type":"related"},{"name":"chromosome 16p duplication","type":"related"},{"name":"partial duplication of chromosome 16p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 16","type":"exact"},{"name":"partial trisomy 16p","type":"related"},{"name":"partial trisomy of chromosome 16p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 16","type":"exact"},{"name":"trisomy 16p","type":"related"}],"termid":"MONDO:0016949","terms_by_termid":{"MONDO:0011402":null},"xrefs":{"Monarch":{"xref_id":"0016949"}}}


id: GO:1905715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cornification.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26014679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"cornification","termid":"GO:0070268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cornification","termid":"GO:1905715"}


id: PBO:0050025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DQ alpha 1","termid":"PBO:0050025"}


id: PBO:0063508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDS5 cohesin associated factor A","termid":"PBO:0063508"}


id: PATO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000372 absolute distance value (obsolete PATO:0000372)","termid":"PATO:0000372"}


id: PBO:0055634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3073","termid":"PBO:0055634"}


id: MONDO:0006827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome caused by an infarct in the vertebral or posterior inferior cerebellar artery. It is characterized by sensory defects affecting the same side of the face as the infarct and the opposite side of the trunk as the infarct. Patients experience difficulty swallowing and/or speaking.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brain stem infarction","termid":"MONDO:0006686"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral medullary syndrome","secondary_identifiers":["MedDRA:10024033","NCIT:C84807","EFO:1001011","icd11.foundation:1606151456","SCTID:78569004","MESH:D014854","DOID:3522","MEDGEN:53057","ICD9:437.1","UMLS:C0043019"],"synonyms":[{"name":"Lateral medullary syndrome","type":"related"},{"name":"PICA syndrome","type":"related"},{"name":"Posterior inferior cerebellar artery syndrome","type":"exact"},{"name":"Vertebral artery syndrome","type":"related"},{"name":"Wallenberg syndrome","type":"exact"},{"name":"Wallenberg's syndrome","type":"exact"}],"termid":"MONDO:0006827","xrefs":{"Monarch":{"xref_id":"0006827"}}}


id: MONDO:0012097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive spondylocostal dysostosis","termid":"MONDO:0010180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025","MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"spondylocostal dysostosis 2, autosomal recessive","secondary_identifiers":["DOID:0112362","MEDGEN:332481","UMLS:C1837549","GARD:9703","OMIM:608681"],"synonyms":[{"name":"SCDO2","type":"related"},{"name":"spondylocostal dysostosis 2","type":"related"},{"name":"spondylocostal dysostosis 2, autosomal recessive","type":"exact"}],"termid":"MONDO:0012097","xrefs":{"Monarch":{"xref_id":"0012097"}}}


id: MONDO:0004975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive, neurodegenerative disease characterized by loss of function and death of nerve cells in several areas of the brain leading to loss of cognitive function such as memory and language.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dementia","termid":"MONDO:0001627"},{"relation_name":"is_a","term_name":"tauopathy","termid":"MONDO:0005574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"Alzheimer disease","secondary_identifiers":["NIFSTD:birnlex_2092","MESH:D000544","ICD9:331.0","SCTID:142811000119104","ICD10CM:G30","ICD9:290.1","UMLS:C0002395","HP:0002511","NCIT:C2866","Orphanet:238616","DOID:10652","icd11.foundation:1611724421","MEDGEN:1853"],"synonyms":[{"name":"AD","type":"exact"},{"name":"Alzheimer dementia","type":"exact"},{"name":"Alzheimer disease","type":"exact"},{"name":"Alzheimer disease, familial","type":"narrow"},{"name":"Alzheimer's dementia","type":"exact"},{"name":"Alzheimer's disease","type":"exact"},{"name":"Alzheimers dementia","type":"exact"},{"name":"Alzheimers disease","type":"exact"},{"name":"presenile and senile dementia","type":"exact"}],"termid":"MONDO:0004975","xrefs":{"Monarch":{"xref_id":"0004975"}}}


id: GO:0034935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4-dichlorotoluene + NADH + H+ + O2 = 4,6-dichloro-3-methyl-cis-1,2-dihydroxycyclohexa-3,5-diene + NAD+.","definition_xrefs":["UM-BBD_reactionID:r0957"],"gene_count":0,"genotype_count":0,"name":"obsolete tetrachlorobenzene dioxygenase activity (obsolete GO:0034935)","termid":"GO:0034935"}


id: GO:0097227
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The ring-like, filamentous structure located at the distal end of the midpiece of the sperm flagellum; the annulus is thought to form a diffusion barrier between the midpiece and the principal piece and serve as a stabilizing structure for tail rigidity.","definition_xrefs":["MP:0009834","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm annulus","termid":"GO:0097227"}


id: GO:0010326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-oxocarboxylate + L-methionine = 4-methylsulfanyl-2-oxobutanoate + an L-alpha-amino acid.","definition_xrefs":["RHEA:31763","PMID:17056707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"methionine-oxo-acid transaminase activity","secondary_identifiers":["EC:2.6.1.88","MetaCyc:R15-RXN"],"termid":"GO:0010326"}


id: MONDO:0002625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A small round cell bone tumor that lacks morphologic, immunohistochemical, and electron microscopic evidence of neuroectodermal differentiation. It represents one of the two ends of the spectrum called Ewing sarcoma/peripheral neuroectodermal tumor. It often affects the diaphysis or metaphyseal-diaphyseal portion of long bones. Clinical findings include pain and a mass in the involved area. fever, anemia, leukocytosis, and an increased sedimentation rate are often seen. X-ray examination reveals osteolytic lesions. The prognosis depends on the stage, anatomic location, and size of the tumor.","definition_xrefs":["NCIT:C4835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ewing sarcoma","termid":"MONDO:0012817"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"},{"relation_name":"is_a","term_name":"Ewing sarcoma/peripheral primitive neuroectodermal tumor of bone","termid":"MONDO:0021123"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Ewing sarcoma of bone","secondary_identifiers":["MEDGEN:108438","UMLS:C0585474","SCTID:307608006","DOID:3368","ICD9:170.9"],"synonyms":[{"name":"Ewing sarcoma of bone","type":"exact"},{"name":"Ewing's sarcoma of bone","type":"exact"},{"name":"Ewing's sarcoma, osseous","type":"exact"},{"name":"Ewing's sarcoma/bone peripheral primitive neuroectodermal tumor","type":"exact"},{"name":"Ewing's sarcoma/bone peripheral primitive neuroectodermal tumour","type":"exact"},{"name":"bone Ewing sarcoma","type":"exact"},{"name":"bone Ewing's sarcoma","type":"exact"},{"name":"bone localised Ewing sarcoma","type":"exact"},{"name":"bone localised Ewing's sarcoma","type":"exact"},{"name":"bone localized Ewing sarcoma","type":"exact"},{"name":"bone localized Ewing's sarcoma","type":"exact"},{"name":"bone tissue Ewing sarcoma","type":"exact"},{"name":"localised skeletal Ewing's sarcoma","type":"exact"},{"name":"localized skeletal Ewing's sarcoma","type":"exact"},{"name":"osseous Ewing's sarcoma","type":"exact"},{"name":"osseous Ewing's tumor","type":"exact"},{"name":"osseous Ewing's tumour","type":"exact"},{"name":"skeletal Ewing's sarcoma","type":"exact"},{"name":"skeletal Ewing's tumor","type":"exact"},{"name":"skeletal Ewing's tumour","type":"exact"}],"termid":"MONDO:0002625","xrefs":{"Monarch":{"xref_id":"0002625"}}}


id: PBO:0065508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persephin","termid":"PBO:0065508"}


id: PR:Q10206
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diphthamide biosynthesis protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03661","PRO:DNx","PANTHER:PTHR10762:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.02","secondary_identifiers":["UniProtKB:Q10206"],"synonyms":[{"name":"Spom972h-DPH2","type":"exact"}],"termid":"PR:Q10206"}


id: PR:O42634
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein DMC1/LIM15 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01411","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein dmc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.03c","secondary_identifiers":["UniProtKB:O42634"],"synonyms":[{"name":"Spom972h-DMC1","type":"exact"}],"termid":"PR:O42634"}


id: PBO:0072926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 7","termid":"PBO:0072926"}


id: GO:0033732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-(2-amino-2-carboxyethyl)-7,8-dioxo-1,2,3,4,7,8-hexahydroquinoline-2,4-dicarboxylate + 3 O2 = 2 H2O + 2 H2O2 + H+ + pyrroloquinoline quinone.","definition_xrefs":["EC:1.3.3.11","RHEA:10692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pyrroloquinoline-quinone synthase activity","secondary_identifiers":["KEGG_REACTION:R07353","MetaCyc:RXN-11181"],"synonyms":[{"name":"6-(2-amino-2-carboxyethyl)-7,8-dioxo-1,2,3,4,5,6,7,8-octahydroquinoline-2,4-dicarboxylate:oxygen oxidoreductase (cyclizing) activity","type":"related"},{"name":"PqqC","type":"related"}],"termid":"GO:0033732"}


id: PBO:0089557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic tetraspan protein, claudin Dni2","termid":"PBO:0089557"}


id: PBO:0075608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondin 2","termid":"PBO:0075608"}


id: GO:0097400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-17 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:21602493","GOC:ic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-17","termid":"GO:0097398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-17-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-448424"],"synonyms":[{"name":"IL-17-mediated signaling pathway","type":"exact"},{"name":"IL-17-mediated signalling pathway","type":"exact"},{"name":"interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:0097400"}


id: GO:0047982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homocysteine + H2O = sulfide + NH3 + 2-oxobutanoate.","definition_xrefs":["MetaCyc:HOMOCYSTEINE-DESULFHYDRASE-RXN","EC:4.4.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"homocysteine desulfhydrase activity","secondary_identifiers":["RHEA:14501","Reactome:R-HSA-1614631"],"synonyms":[{"name":"L-homocysteine hydrogen-sulfide-lyase (deaminating)","type":"related"},{"name":"L-homocysteine hydrogen-sulfide-lyase (deaminating; 2-oxobutanoate-forming)","type":"related"},{"name":"homocysteine desulfurase activity","type":"related"}],"termid":"GO:0047982"}


id: PR:Q10247
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G9.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C4G9.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.19","synonyms":[{"name":"Spom972h-SPAC4G9.19","type":"exact"}],"termid":"PR:Q10247"}


id: PR:Q9US22
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1502 gene.","definition_xrefs":["UniProtKB:Q9US22","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L15-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.08c","synonyms":[{"name":"Spom972h-rpl1502","type":"exact"}],"termid":"PR:Q9US22"}


id: MONDO:0004417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infiltrating bladder urothelial carcinoma","termid":"MONDO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nested variant infiltrating bladder urothelial carcinoma","secondary_identifiers":["NCIT:C39819","UMLS:C1512741","MEDGEN:268575","DOID:7969"],"synonyms":[{"name":"infiltrating bladder urothelial carcinoma, nested variant","type":"exact"}],"termid":"MONDO:0004417","xrefs":{"Monarch":{"xref_id":"0004417"}}}


id: GO:0019005
data:
  {"annotated_genes":["SJAG_02162","SJAG_02651","SJAG_02591","SJAG_03651","SJAG_00439","SJAG_01022","SJAG_00341","SJAG_00192","SJAG_02822","SJAG_03219","SJAG_00615","SJAG_02044"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74360,80600,88883,95874,98782,103211],"is_not":false,"summary":null,"term":"GO:0019005"},{"annotations":[94677,90926,98102,105219,109444,110690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043224"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00192":null,"SJAG_00341":null,"SJAG_00439":null,"SJAG_00615":null,"SJAG_01022":null,"SJAG_02044":null,"SJAG_02162":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_03219":null,"SJAG_03651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:SCF_complex"],"synonyms":[{"name":"CDL1 complex","type":"exact"},{"name":"CRL1 complex","type":"exact"},{"name":"Cul1-RING ubiquitin ligase complex","type":"exact"},{"name":"SCF complex","type":"exact"},{"name":"SCF complex substrate recognition subunit","type":"narrow"},{"name":"Skp1/Cul1/F-box protein complex","type":"exact"},{"name":"cullin-RING ligase 1","type":"exact"}],"termid":"GO:0019005","terms_by_termid":{"GO:0019005":null,"GO:0043224":null}}


id: PR:000050511
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein rec8 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Ser-450 of the amino acid sequence represented by UniProtKB:P36626. Example: UniProtKB:P36626, Ser-450, MOD:00046.","definition_xrefs":["PRO:DAN","PMID:33888556","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic recombination protein rec8 (Schizosaccharomyces pombe)","termid":"PR:000050510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rec8/Phos(S450)","pombase_gene_id":"SPBC29A10.14","synonyms":[{"name":"PomBase_original_PRO_term_name: meiotic recombination protein rec8 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rec8/Phos:1","type":"exact"},{"name":"UniProtKB:P36626, Ser-450, MOD:00046","type":"narrow"},{"name":"rec8/Phos(S450)","type":"exact"}],"termid":"PR:000050511"}


id: MONDO:1012631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any difference of sexual differentiation that occurs in common carp and is characterized by male sex reversal in gynogenetic females with XX karyotype.","direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XX difference of sexual development, common carp","secondary_identifiers":["OMIA:000901-7962"],"termid":"MONDO:1012631","xrefs":{"Monarch":{"xref_id":"1012631"}}}


id: GO:1900136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine activity","termid":"GO:0060300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of chemokine activity","termid":"GO:1900136"}


id: GO:0019118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phenanthrene dioxide + H2O = a dihydrodiolphenanthrene.","definition_xrefs":["UM-BBD_reactionID:r0536","GOC:mah","UM-BBD_reactionID:r0535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epoxide hydrolase activity","termid":"GO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenanthrene-epoxide hydrolase activity","termid":"GO:0019118"}


id: GO:0048617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the foregut are generated and organized, during the embryonic phase.","definition_xrefs":["GOC:rc","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"foregut morphogenesis","termid":"GO:0007440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic foregut morphogenesis","termid":"GO:0048617"}


id: MONDO:0008473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare type of spondyloepiphyseal dysplasia described in fewer than 10 patients to date and characterized clinically by dysplastic epiphyses, short stature appearing in infancy, short neck, short and stubby hands and feet, scoliosis, genu valgum, abnormal pelvis, osteoporosis and osteoarthritis.","definition_xrefs":["Orphanet:263482"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"TRPV4-related bone disorder","termid":"MONDO:0018240"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Maroteaux type","secondary_identifiers":["SCTID:719204007","UMLS:C3159322","GARD:994","MEDGEN:463613","OMIM:184095","DOID:0111553"],"synonyms":[{"name":"SED, Maroteaux type","type":"exact"},{"name":"brachyolmia Maroteaux type","type":"related"},{"name":"pseudo-Morquio syndrome type 2","type":"exact"},{"name":"pseudo-Morquio syndrome, type 2","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, Maroteaux type","type":"exact"},{"name":"spondyloepiphyseal dysplasia Maroteaux type","type":"exact"},{"name":"spondyloepiphyseal dysplasia, Maroteaux type","type":"exact"}],"termid":"MONDO:0008473","xrefs":{"Monarch":{"xref_id":"0008473"}}}


id: SO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inframe non synonymous variant that deletes bases from the coding sequence.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inframe_indel","termid":"SO:0001820"},{"relation_name":"is_a","term_name":"feature_truncation","termid":"SO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inframe_deletion","secondary_identifiers":["SO:0001652","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://vat.gersteinlab.org/formats.php","http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"ANNOVAR:nonframeshift deletion","type":"exact"},{"name":"Jannovar:inframe_deletion","type":"exact"},{"name":"VAT:deletionNFS","type":"exact"},{"name":"VEP:inframe_deletion","type":"exact"},{"name":"inframe codon loss","type":"related"},{"name":"inframe decrease in CDS length","type":"exact"},{"name":"inframe deletion","type":"related"},{"name":"inframe_codon_loss","type":"exact"},{"name":"snpEff:CODON_DELETION","type":"related"}],"termid":"SO:0001822"}


id: GO:0033372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protease to a location within a secretory granule in a mast cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to mast cell secretory granule","termid":"GO:0033369"},{"relation_name":"part_of","term_name":"protease localization to mast cell secretory granule","termid":"GO:0033368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"establishment of protease localization to mast cell secretory granule","synonyms":[{"name":"establishment of protease localisation in mast cell secretory granule","type":"exact"},{"name":"establishment of protease localization in mast cell secretory granule","type":"exact"}],"termid":"GO:0033372"}


id: PBO:0083489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YBR278W","termid":"PBO:0083489"}


id: PBO:0058525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6070","termid":"PBO:0058525"}


id: MONDO:0020181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mesenchymatous palpebral tumor (obsolete MONDO:0020181)","secondary_identifiers":["Orphanet:98591"],"termid":"MONDO:0020181","xrefs":{"Monarch":{"xref_id":"0020181"}}}


id: SO:1000161
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An interchromosomal transposition whereby a copy of the segment between the first two breaks listed is inserted at the third break; the orientation of the insertion with respect to its flanking segments is not recorded.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interchromosomal_transposition","termid":"SO:1000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unoriented_interchromosomal_transposition","synonyms":[{"name":"(Drosophila)uTp","type":"related"},{"name":"unorientated interchromosomal transposition","type":"exact"}],"termid":"SO:1000161"}


id: PBO:0086358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative 4a-hydroxytetrahydrobiopterin dehydratase; green fluorescent protein (GFP)-fusion protein localizes to mitochondria and is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086358"}


id: MONDO:0004664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic infection characterized by the infestation with worms, mainly in the intestine.","definition_xrefs":["NCIT:C84751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helminthiasis","secondary_identifiers":["ICD10CM:B65-B83","ICD9:128.8","MEDGEN:6765","SCTID:27601005","UMLS:C0018889","MESH:D006373","ICD9:128.9","DOID:883","EFO:1001342","ICD9:120-129.99"],"synonyms":[{"name":"helminth infection","type":"exact"},{"name":"helminthiasis","type":"exact"},{"name":"helminthosis","type":"exact"},{"name":"parasitic helminthiasis infectious disease","type":"exact"},{"name":"worm infection","type":"related"}],"termid":"MONDO:0004664","xrefs":{"Monarch":{"xref_id":"0004664"}}}


id: GO:0010030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increase the rate of seed germination.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of seed germination","termid":"GO:0010029"},{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"positively_regulates","term_name":"seed germination","termid":"GO:0009845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of seed germination","synonyms":[{"name":"activation of seed germination","type":"narrow"},{"name":"stimulation of seed germination","type":"narrow"},{"name":"up regulation of seed germination","type":"exact"},{"name":"up-regulation of seed germination","type":"exact"},{"name":"upregulation of seed germination","type":"exact"}],"termid":"GO:0010030"}


id: GO:0061158
data:
  {"annotated_genes":["SJAG_04825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118715],"is_not":false,"summary":null,"term":"GO:0061158"}]},"cv_name":"biological_process","definition":"An mRNA destabilization process in which one or more RNA-binding proteins associate with the 3'-untranslated region (UTR) of an mRNA.","definition_xrefs":["GOC:jh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04825":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"3'-UTR-mediated mRNA destabilization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061158","terms_by_termid":{"GO:0061158":null}}


id: PBO:0064213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase B domain containing 2","termid":"PBO:0064213"}


id: GO:0006911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis, including the membrane and cytoskeletal processes required, which involves one of three mechanisms: zippering of pseudopods around a target via repeated receptor-ligand interactions, sinking of the target directly into plasma membrane of the phagocytosing cell, or induced uptake via an enhanced membrane ruffling of the phagocytosing cell similar to macropinocytosis.","definition_xrefs":["GOC:curators","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane invagination","termid":"GO:0099024"},{"relation_name":"part_of","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"phagocytosis, engulfment","synonyms":[{"name":"phagosome biosynthesis","type":"related"},{"name":"phagosome formation","type":"related"}],"termid":"GO:0006911"}


id: PBO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Sfp1 (predicted)","termid":"PBO:0002515"}


id: PBO:0001517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C (PKC)-like Pck1","termid":"PBO:0001517"}


id: PBO:0070433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa GTPase regulator","termid":"PBO:0070433"}


id: GO:0031311
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the contractile vacuolar membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of contractile vacuolar membrane (obsolete GO:0031311)","synonyms":[{"name":"intrinsic to contractile vacuolar membrane","type":"narrow"}],"termid":"GO:0031311"}


id: MONDO:0019976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conditions characterized by persistent brain damage or dysfunction as sequelae of cranial trauma. This disorder may result from diffuse axonal injury; intracranial hemorrhages; brain edema; and other conditions. Clinical features may include dementia; focal neurologic deficits; persistent vegetative state; akinetic mutism; or coma.","definition_xrefs":["MESH:D020208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dementia","termid":"MONDO:0001627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"dementia pugilistica","secondary_identifiers":["GARD:19371","SCTID:230283005","UMLS:C0149843","DOID:0081291","MEDGEN:508441","Orphanet:97353"],"synonyms":[{"name":"Boxer's dementia","type":"exact"},{"name":"chronic traumatic encephalopathy","type":"exact"},{"name":"punch-drunk syndrome","type":"exact"}],"termid":"MONDO:0019976","xrefs":{"Monarch":{"xref_id":"0019976"}}}


id: PBO:0039034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 11","termid":"PBO:0039034"}


id: MONDO:0016045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetragametic chimerism is a rare, sex chromosome disorder of sex development characterized by the two different haploid sets of maternal and paternal chromosomes and variable phenotype - from normal male or female genitalia, to different degrees of ambiguous genitalia, and often infertility. Also, in the cases of monochorionic dizygotic twins, it can be confined to blood of both twins.","definition_xrefs":["Orphanet:199310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome disorder of sex development","termid":"MONDO:0017975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism","secondary_identifiers":["MEDGEN:609542","UMLS:C0432480","GARD:20332"],"synonyms":[{"name":"46,XX/46,XY chimerism","type":"exact"}],"termid":"MONDO:0016045","xrefs":{"Monarch":{"xref_id":"0016045"}}}


id: FYPO:0006746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the fungal-type cell wall is thinner than normal at one or both cell tips.","definition_xrefs":["PomBase:mah","PMID:29689193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell wall thickness during vegetative growth","termid":"FYPO:0002163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002946"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002946","FYPO:0001320"],"is_obsolete":false,"name":"decreased cell wall thickness at cell tip during vegetative growth","synonyms":[{"name":"decreased cell wall thickness at cell end during vegetative growth","type":"exact"},{"name":"decreased cell wall thickness at cell tip during mitotic cell cycle","type":"related"},{"name":"reduced cell wall thickness at cell tip during vegetative growth","type":"exact"},{"name":"thin cell wall at cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0006746"}


id: PBO:0046793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor II, thrombin","termid":"PBO:0046793"}


id: PBO:0031389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_methionine","termid":"PBO:0031389"}


id: GO:0052934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 [Fe(III)cytochrome c] + a primary alcohol = 2 [Fe(II)cytochrome c] + an aldehyde + 2 H+.","definition_xrefs":["RHEA:51020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"alcohol dehydrogenase (cytochrome c) activity","secondary_identifiers":["KEGG_REACTION:R05285","MetaCyc:RXN-11333","GO:0018468","GO:0052936","EC:1.1.2.8","KEGG_REACTION:R05198","GO:0052935"],"synonyms":[{"name":"2-chloroethanol:cytochrome c oxidoreductase activity","type":"narrow"},{"name":"PQQ-dependent alcohol dehydrogenase activity","type":"exact"},{"name":"alcohol dehydrogenase (acceptor) activity","type":"broad"},{"name":"alcohol:(acceptor) oxidoreductase activity","type":"related"},{"name":"alcohol:acceptor oxidoreductase activity","type":"related"},{"name":"alcohol:cytochrome c oxidoreductase activity","type":"exact"},{"name":"ethanol:cytochrome c oxidoreductase activity","type":"narrow"},{"name":"quinoprotein alcohol dehydrogenase activity","type":"related"}],"termid":"GO:0052934"}


id: PBO:0055135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2554","termid":"PBO:0055135"}


id: PBO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase Spk1","termid":"PBO:0001833"}


id: GO:0031053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the conversion of a primary microRNA transcript into a pre-microRNA molecule.","definition_xrefs":["PMID:25799998","GOC:sl","PMID:15211354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"primary miRNA processing","secondary_identifiers":["GO:1990744","GO:1990729"],"synonyms":[{"name":"pri-miRNA processing","type":"exact"},{"name":"primary miRNA methylation","type":"narrow"},{"name":"primary miRNA modification","type":"exact"},{"name":"primary microRNA processing","type":"exact"}],"termid":"GO:0031053"}


id: PBO:0116807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMP1 and DSPP antisense RNA 1","termid":"PBO:0116807"}


id: PBO:0081828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 761","termid":"PBO:0081828"}


id: PBO:0054295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1686","termid":"PBO:0054295"}


id: PBO:0062193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily R member 2 pseudogene","termid":"PBO:0062193"}


id: PBO:0067808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 110","termid":"PBO:0067808"}


id: GO:0009595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a biotic stimulus, one caused or produced by a living organism, is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of biotic stimulus","secondary_identifiers":["GO:0009596"],"synonyms":[{"name":"perception of biotic stimulus","type":"related"}],"termid":"GO:0009595"}


id: PBO:0062532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily A member 1 pseudogene","termid":"PBO:0062532"}


id: PBO:0061892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 1, long wave sensitive","termid":"PBO:0061892"}


id: FYPO:0004277
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of uracil DNA N-glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA N-glycosylase activity","termid":"FYPO:0008216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal uracil DNA N-glycosylase activity","termid":"FYPO:0004277"}


id: MONDO:0031012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune form of uveitis (disease).","definition_xrefs":["MONDO:patterns/autoimmune"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease of ear, nose and throat","termid":"MONDO:0000587"},{"relation_name":"is_a","term_name":"uveitis","termid":"MONDO:0020283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005328"],"is_obsolete":false,"name":"autoimmune uveitis","secondary_identifiers":["MEDGEN:1843501","UMLS:C3888523","DOID:0040088"],"synonyms":[{"name":"autoimmune uveitis (disease)","type":"exact"}],"termid":"MONDO:0031012","xrefs":{"Monarch":{"xref_id":"0031012"}}}


id: PBO:0040441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8B2","termid":"PBO:0040441"}


id: PBO:0053034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARGE intronic transcript 1","termid":"PBO:0053034"}


id: PBO:0065869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB26, member RAS oncogene family","termid":"PBO:0065869"}


id: MONDO:0000840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of avascular necrosis where there is death of a portion of the bone that is thought to be caused by nitrogen embolism.","direct_ancestors":[{"relation_name":"is_a","term_name":"avascular necrosis","termid":"MONDO:0018373"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysbaric osteonecrosis","secondary_identifiers":["SCTID:431591000124102","DOID:0080018","UMLS:C3494941","MEDGEN:782135"],"synonyms":[{"name":"DON","type":"exact"},{"name":"caisson disease of bone","type":"exact"}],"termid":"MONDO:0000840","xrefs":{"Monarch":{"xref_id":"0000840"}}}


id: PBO:0046580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 22","termid":"PBO:0046580"}


id: GO:0090654
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Tubulo-vesicular structure located in the basolateral cytoplasm that participates in basolateral cargo recycling in polarized epithelial cells.","definition_xrefs":["PMID:16394106","PMID:17494872","PMID:21170358","PMID:9405315","PMID:11389442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recycling endosome","termid":"GO:0055037"},{"relation_name":"part_of","term_name":"basolateral cytoplasm","termid":"GO:0090652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737","GO:0005768"],"is_obsolete":false,"name":"basolateral recycling endosome","termid":"GO:0090654"}


id: GO:0047917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-D-glucose + H2O = D-glucose + GDP + H+.","definition_xrefs":["RHEA:15049","EC:3.2.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"GDP-glucosidase activity","secondary_identifiers":["KEGG_REACTION:R00337","MetaCyc:GDP-GLUCOSIDASE-RXN"],"synonyms":[{"name":"GDP-glucose glucohydrolase activity","type":"related"},{"name":"GDPglucose glucohydrolase activity","type":"related"},{"name":"GDPglucosidase activity","type":"related"},{"name":"guanosine diphosphate D-glucose glucohydrolase activity","type":"related"},{"name":"guanosine diphosphoglucosidase activity","type":"related"}],"termid":"GO:0047917"}


id: PBO:0083092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor required for activating GAL genes; responds to galactose; repressed by Gal80p and activated by Gal3p","termid":"PBO:0083092"}


id: PBO:0002789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit 7a (predicted)","termid":"PBO:0002789"}


id: PBO:0031454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_envelope_morphology_during_vegetative_growth","termid":"PBO:0031454"}


id: PBO:0035919
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_transport_along_microtubule_during_vegetative_growth","termid":"PBO:0035919"}


id: PBO:0056098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 3","termid":"PBO:0056098"}


id: FYPO:0003476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of arsenate reductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal arsenate reductase activity","termid":"FYPO:0003475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased arsenate reductase activity","synonyms":[{"name":"reduced arsenate reductase activity","type":"exact"}],"termid":"FYPO:0003476"}


id: GO:2000648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of stem cell proliferation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of stem cell proliferation","termid":"GO:0072091"},{"relation_name":"positively_regulates","term_name":"stem cell proliferation","termid":"GO:0072089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stem cell proliferation","termid":"GO:2000648"}


id: PBO:0117032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRK1 antisense RNA 1","termid":"PBO:0117032"}


id: GO:0103002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 16-hydroxypalmitate + NADP = H+ + 16-oxo-palmitate + NADPH.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"16-hydroxypalmitate dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-9802"],"termid":"GO:0103002"}


id: MONDO:0021052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant, usually non-functioning, extra-adrenal paraganglioma that arises from paraganglia located along the parasympathetic nerves. Representative examples include aorticopulmonary, carotid body, jugulotympanic, and mediastinal paragangliomas.","definition_xrefs":["NCIT:C4217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paraganglioma","termid":"MONDO:0000448"},{"relation_name":"is_a","term_name":"parasympathetic nervous system disorder","termid":"MONDO:0044995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parasympathetic paraganglioma","secondary_identifiers":["ICDO:8682/1","UMLS:C0334416","MEDGEN:90779"],"synonyms":[{"name":"paraganglioma of parasympathetic nervous system","type":"exact"},{"name":"parasympathetic Extra-adrenal paraganglioma","type":"exact"},{"name":"parasympathetic Paraganglionic neoplasm","type":"exact"},{"name":"parasympathetic nervous system paraganglioma","type":"exact"},{"name":"parasympathetic paraganglioma","type":"exact"}],"termid":"MONDO:0021052","xrefs":{"Monarch":{"xref_id":"0021052"}}}


id: PBO:0031669
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport","termid":"PBO:0031669"}


id: MONDO:0002072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neoplasm usually occurring in infants. It is characterized by the presence of a mixture of melanin-containing epithelial cells and smaller neuroblast-like cells. It may involve the skull and facial bones, or the epididymis. It usually has a benign clinical course.","definition_xrefs":["NCIT:C3717"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"primitive neuroectodermal tumor","termid":"MONDO:0005462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanotic neuroectodermal tumor","secondary_identifiers":["MESH:D017600","DOID:166","MEDGEN:60073","ICDO:9363/0","SCTID:404042005","UMLS:C0206094"],"synonyms":[{"name":"MNTI","type":"exact"},{"name":"infantile melanotic neuroectodermal neoplasm","type":"exact"},{"name":"melanotic Progonoma","type":"exact"},{"name":"melanotic neuroectodermal tumor (morphologic abnormality)","type":"exact"},{"name":"melanotic neuroectodermal tumor of infancy","type":"exact"},{"name":"melanotic neuroectodermal tumor of infancy (morphologic abnormality)","type":"exact"},{"name":"melanotic neuroectodermal tumour (morphologic abnormality)","type":"exact"},{"name":"melanotic neuroectodermal tumour of infancy","type":"exact"},{"name":"melanotic neuroectodermal tumour of infancy (morphologic abnormality)","type":"exact"},{"name":"pigmented neuroectodermal tumor","type":"exact"},{"name":"pigmented neuroectodermal tumor of infancy","type":"exact"},{"name":"pigmented neuroectodermal tumour","type":"exact"},{"name":"pigmented neuroectodermal tumour of infancy","type":"exact"},{"name":"retinal anlage neoplasm","type":"exact"}],"termid":"MONDO:0002072","xrefs":{"Monarch":{"xref_id":"0002072"}}}


id: PBO:0082985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic aldehyde dehydrogenase; activated by Mg2+ and utilizes NADP+ as the preferred coenzyme; required for conversion of acetaldehyde to acetate; constitutively expressed; locates to the mitochondrial outer surface upon oxidative stress","termid":"PBO:0082985"}


id: RO:0002113
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a neuron and some structure (e.g.- a brain region) in which it receives (chemical) synaptic input.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_synaptic_terminal_in","termid":"RO:0002130"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_presynaptic_terminal_in","termid":"RO:0002113"}


id: PR:O42912
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tad1 gene.","definition_xrefs":["UniProtKB:O42912","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific adenosine deaminase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.06","synonyms":[{"name":"Spom972h-tad1","type":"exact"},{"name":"tRNA-specific adenosine-37 deaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42912"}


id: GO:0080019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a very long-chain fatty acyl-CoA + NADPH + H+ = a very long-chain primary alcohol + NADP+ + CoA. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["PMID:16980563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alcohol-forming very long-chain fatty acyl-CoA reductase activity","synonyms":[{"name":"fatty acyl CoA reductase (alcohol-forming) activity","type":"exact"},{"name":"fatty acyl-CoA reductase (alcohol-forming) activity","type":"exact"},{"name":"fatty-acyl-CoA reductase (alcohol-forming) activity","type":"related"}],"termid":"GO:0080019"}


id: FYPO:0003681
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a protein found associated with chromatin at the centromere outer repeat heterochromatin is lower than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:20018856","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level at centromere outer repeat heterochromatin","synonyms":[{"name":"decreased protein level at centromere otr","type":"exact"},{"name":"decreased protein level at centromere outer repeat chromatin","type":"exact"},{"name":"decreased protein level at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased protein level at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased protein level at centromeric outer repeat region","type":"exact"},{"name":"decreased protein level at pericentric region","type":"related"},{"name":"decreased protein level at pericentromeric region","type":"related"},{"name":"reduced protein level at centromere outer repeat","type":"exact"}],"termid":"FYPO:0003681"}


id: MONDO:0018440
data:
  {"annotated_genes":["SJAG_00136","SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009968"},{"annotations":[86470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011268"}]},"cv_name":"mondo","definition":"Autosomal recessive distal renal tubular acidosis (AR dRTA) is an inherited form of distal renal tubular acidosis (dRTA) characterized by hypokalemic hyperchloremic metabolic acidosis. Deafness often occurs either early or later on in life but may be absent or never be diagnosed.","definition_xrefs":["Orphanet:402041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"distal renal tubular acidosis","termid":"MONDO:0015827"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive distal renal tubular acidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:4666","MEDGEN:351142","UMLS:C1864498"],"synonyms":[{"name":"AR dRTA","type":"exact"},{"name":"autosomal recessive distal RTA","type":"exact"},{"name":"autosomal recessive distal renal tubular acidosis (disease)","type":"exact"},{"name":"distal renal tubular acidosis (disease), autosomal recessive","type":"exact"}],"termid":"MONDO:0018440","terms_by_termid":{"MONDO:0009968":null,"MONDO:0011268":null},"xrefs":{"Monarch":{"xref_id":"0018440"}}}


id: PBO:0054080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1430","termid":"PBO:0054080"}


id: MONDO:0033667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delpire-McNeill syndrome","secondary_identifiers":["OMIM:619083","UMLS:C5436771","GARD:18533","MEDGEN:1725056"],"synonyms":[{"name":"DELMNES","type":"exact"}],"termid":"MONDO:0033667","xrefs":{"Monarch":{"xref_id":"0033667"}}}


id: MONDO:1010470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent truncus arteriosus that occurs in alpaca.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"persistent truncus arteriosus, non-human animal","termid":"MONDO:1010018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent truncus arteriosus, alpaca","secondary_identifiers":["OMIA:000795-30538"],"termid":"MONDO:1010470","xrefs":{"Monarch":{"xref_id":"1010470"}}}


id: FYPO:0006207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin filament depolymerization, i.e. the removal of actin monomers from a filament, is decreased.","definition_xrefs":["PomBase:mah","PMID:16866873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament organization during vegetative growth","termid":"FYPO:0000727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0004803","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of actin filament depolymerization","synonyms":[{"name":"decreased rate of actin filament depolymerisation","type":"exact"},{"name":"decreased rate of actin filament depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased rate of actin filament depolymerization during vegetative growth","type":"exact"},{"name":"reduced rate of actin filament depolymerization","type":"exact"}],"termid":"FYPO:0006207"}


id: MONDO:0006872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Allergic reaction to tree nuts that is triggered by the immune system.","definition_xrefs":["MESH:D021184"],"gene_count":0,"genotype_count":0,"name":"obsolete nut allergic reaction (obsolete MONDO:0006872)","secondary_identifiers":["DOID:4379","SCTID:91934008"],"synonyms":[{"name":"022 tree nuts (tn) (ccpr) allergic disease","type":"exact"},{"name":"allergy of 022 tree nuts (tn) (ccpr)","type":"exact"},{"name":"allergy to nuts","type":"exact"},{"name":"nut allergic reaction","type":"exact"},{"name":"nut allergy","type":"related"}],"termid":"MONDO:0006872","xrefs":{"Monarch":{"xref_id":"0006872"}}}


id: FYPO:0004071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to copper ions is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion during vegetative growth","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion during vegetative growth","type":"related"},{"name":"decreased RNA level during cellular response to copper during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion during mitotic cell cycle","type":"related"},{"name":"decreased transcript level during cellular response to copper ion during vegetative growth","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion during vegetative growth","type":"exact"}],"termid":"FYPO:0004071"}


id: GO:1900809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumigaclavine C, a fungal ergot alkaloid.","definition_xrefs":["GOC:TermGenie","PMID:26972831","PMID:15933009","PMID:23435153","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ergot alkaloid biosynthetic process","termid":"GO:0035837"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"fumigaclavine C biosynthetic process","secondary_identifiers":["GO:1900807"],"synonyms":[{"name":"fumigaclavine C anabolism","type":"exact"},{"name":"fumigaclavine C biosynthesis","type":"exact"},{"name":"fumigaclavine C formation","type":"exact"},{"name":"fumigaclavine C metabolic process","type":"broad"},{"name":"fumigaclavine C metabolism","type":"broad"},{"name":"fumigaclavine C synthesis","type":"exact"}],"termid":"GO:1900809"}


id: PBO:0017772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic phosphate transmembrane transporter (predicted)","termid":"PBO:0017772"}


id: MONDO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually pigmented, nodular or polypoid malignant neoplasm that originates from melanocytes and arises from the vulva. It presents with bleeding and dysuria.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulva cancer","termid":"MONDO:0001528"},{"relation_name":"is_a","term_name":"non-cutaneous melanoma","termid":"MONDO:0006320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar melanoma","secondary_identifiers":["MEDGEN:66040","HP:0030418","DOID:2093","NCIT:C40329","SCTID:254896002","UMLS:C0241989"],"synonyms":[{"name":"malignant melanoma of vulva","type":"exact"},{"name":"mammalian vulva melanoma","type":"exact"},{"name":"mammalian vulva melanoma (disease)","type":"exact"},{"name":"melanoma (disease) of mammalian vulva","type":"exact"},{"name":"vulvar melanoma","type":"exact"},{"name":"vulvar melanoma (disease)","type":"exact"}],"termid":"MONDO:0002205","xrefs":{"Monarch":{"xref_id":"0002205"}}}


id: PBO:0051076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 6-13","termid":"PBO:0051076"}


id: FYPO:0004590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which localization of the gamma-tubulin complex to the spindle pole body takes place abnormally after the cell has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body","termid":"FYPO:0004589"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype following normal mitosis","termid":"FYPO:0004593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis","synonyms":[{"name":"abnormal gamma-tubulin complex localisation to mitotic spindle pole body following normal mitosis","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic SPB following normal mitosis","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis and interphase","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body following normal mitosis during vegetative growth","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body nuclear division following normal mitotic nuclear division","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to spindle pole body following normal nuclear division during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004590"}


id: GO:0015003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A copper-containing entity that serves as an electron acceptor and electron donor in an electron transport system.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete copper electron carrier (obsolete GO:0015003)","synonyms":[{"name":"copper electron carrier","type":"exact"}],"termid":"GO:0015003"}


id: SOFP:encoded_symbol
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"dicistronic CDS/proteins are attached to a single gene feature representing the whole cassette - in which case the symbol refers to the cassette. encoded_symbol refers to a gene in the sense of non-overlapping CDS set. cf Adh and Adhr in dmel","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encoded_symbol","termid":"SOFP:encoded_symbol"}


id: PBO:0084172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-mobility group (HMG) protein; binds to and remodels nucleosomes; involved in recruiting FACT and other chromatin remodelling complexes to the chromosomes; functionally redundant with Nhp6Ap; required for transcriptional initiation fidelity of some tRNA genes; homologous to mammalian HMGB1 and HMGB2; NHP6B has a paralog, NHP6A, that arose from the whole genome duplication","termid":"PBO:0084172"}


id: FYPO:0001056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which L-arginine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal arginine import","synonyms":[{"name":"normal L-arginine import","type":"exact"},{"name":"normal L-arginine import across plasma membrane","type":"exact"},{"name":"normal L-arginine uptake","type":"exact"},{"name":"normal arginine import during mitotic cell cycle","type":"related"},{"name":"normal arginine import during vegetative growth","type":"exact"},{"name":"normal arginine import into cell","type":"exact"}],"termid":"FYPO:0001056"}


id: GO:0046117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of queuosines, any of a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete queuosine catabolic process (obsolete GO:0046117)","synonyms":[{"name":"queuosine breakdown","type":"exact"},{"name":"queuosine catabolism","type":"exact"},{"name":"queuosine degradation","type":"exact"}],"termid":"GO:0046117"}


id: PBO:0071480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 21","termid":"PBO:0071480"}


id: MONDO:0024563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Mendelian susceptibility or predisposition to herpes simplex infection induced encephalitis in which the cause of the diseas is a mutation in the UNC93B1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalopathy, acute, infection-induced","termid":"MONDO:0000166"},{"relation_name":"excluded_subClassOf","term_name":"herpes simplex encephalitis","termid":"MONDO:0012521"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herpes simplex encephalitis, susceptibility to, 1","secondary_identifiers":["MEDGEN:413772","OMIM:610551","UMLS:C2750180"],"synonyms":[{"name":"IIAE1","type":"related"},{"name":"UNC93B1 herpes simplex encephalitis","type":"exact"},{"name":"encephalopathy, acute, infection-induced (HERPES-specific), susceptibility to, 1","type":"related"},{"name":"encephalopathy, acute, infection-induced (Herpes-specific), susceptibility to, 1","type":"related"},{"name":"encephalopathy, acute, infection-induced, susceptibility to, 1","type":"related"},{"name":"herpes simplex encephalitis caused by mutation in UNC93B1","type":"exact"},{"name":"herpes simplex encephalitis, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0024563","xrefs":{"Monarch":{"xref_id":"0024563"}}}


id: GO:0031946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucocorticoid metabolic process","termid":"GO:0031943"},{"relation_name":"is_a","term_name":"regulation of steroid hormone biosynthetic process","termid":"GO:0090030"},{"relation_name":"regulates","term_name":"glucocorticoid biosynthetic process","termid":"GO:0006704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of glucocorticoid biosynthetic process","termid":"GO:0031946"}


id: MONDO:0006813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nevus characterized by the proliferation of nevus cells in the dermis without involvement of the dermal-epidermal junction.","definition_xrefs":["NCIT:C3804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"intradermal nevus","secondary_identifiers":["UMLS:C0206737","MEDGEN:61670","MESH:D018330","SCTID:302838006","ICDO:8750/0","EFO:1000995","MedDRA:10058537"],"synonyms":[{"name":"dermal Nevus","type":"exact"}],"termid":"MONDO:0006813","xrefs":{"Monarch":{"xref_id":"0006813"}}}


id: GO:0009324
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses D-amino-acid dehydrogenase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"D-amino-acid dehydrogenase complex","termid":"GO:0009324"}


id: PBO:0000135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS family membrane transporter (predicted)","termid":"PBO:0000135"}


id: MONDO:0700281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant complex neurodevelopmental disorder in which the cause of the disease is a mutation in the MYH10 gene.","definition_xrefs":["PMID:25003005","PMID:35980381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"complex neurodevelopmental disorder with or without congenital anomalies","termid":"MONDO:0100465"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0000426"],"is_obsolete":false,"name":"MYH10-related neurodevelopmental disorder with congenital anomalies","termid":"MONDO:0700281","xrefs":{"Monarch":{"xref_id":"0700281"}}}


id: PBO:0026706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_proline_level","termid":"PBO:0026706"}


id: GO:0120016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes a sphingolipid from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["PMID:20823909","PMID:25797198","GOC:krc","PMID:24220498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid transporter activity","termid":"GO:0046624"},{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0120013","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sphingolipid transfer activity","synonyms":[{"name":"intermembrane sphingolipid transfer activity","type":"narrow"},{"name":"sphingolipid carrier activity","type":"narrow"}],"termid":"GO:0120016"}


id: PBO:0067624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 796, pseudogene","termid":"PBO:0067624"}


id: FYECO:0000314
data:
  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id: PBO:0068342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 113B","termid":"PBO:0068342"}


id: SO:0001025
data:
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id: PBO:0059907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 30","termid":"PBO:0059907"}


id: FYPO:0005994
data:
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id: PBO:0049331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIF subunit 2 pseudogene 1","termid":"PBO:0049331"}


id: GO:1900626
data:
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id: FYPO:0000124
data:
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cell","references_by_uniquename":{"PMID:29566183":null,"PMID:30664646":null,"PMID:31150379":null,"PMID:40195311":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_02013","SJAG_01794","SJAG_03048","SJAG_03581","SJAG_02923","SJAG_02342","SJAG_03453","SJAG_04009","SJAG_03753","SJAG_02592","SJAG_02486","SJAG_00028","SJAG_02819","SJAG_02379","SJAG_00514","SJAG_00370","SJAG_01718","SJAG_04522","SJAG_00993","SJAG_01181","SJAG_03384","SJAG_04280","SJAG_04777"],"single_locus_genotype_uniquenames":["mkh1delta","byr2delta","ste11delta","win1delta","pyp1delta","scd2delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","gef1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","rga4delta","pmk1delta","spk1delta","sty1delta","ste6delta","wis4delta","pek1delta","byr1delta","gap1delta","erg1delta","ras1delta","rga6delta","efc25delta","scd1delta","wis1delta"],"termid":"FYPO:0000124","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0000124":null,"FYPO:0000648":null,"FYPO:0001877":null,"FYPO:0002380":null,"FYPO:0006616":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0000766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain","termid":"PBO:0000766"}


id: RO:HOM0000001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Similarity that results from common evolutionary origin.","direct_ancestors":[{"relation_name":"is_a","term_name":"shares_ancestor_with","termid":"RO:0002158"},{"relation_name":"is_a","term_name":"in_similarity_relationship_with","termid":"RO:HOM0000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_homology_relationship_with","synonyms":[{"name":"homologous to","type":"exact"}],"termid":"RO:HOM0000001"}


id: PBO:0029894
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_terbinafine","termid":"PBO:0029894"}


id: PBO:0070163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 77 pseudogene","termid":"PBO:0070163"}


id: PBO:0034552
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_inositol_phosphorylceramide_level","termid":"PBO:0034552"}


id: SO:1000108
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000108 mutaton_causing_inframe_polypeptide_C_terminal_elongation (obsolete SO:1000108)","synonyms":[{"name":"inframe_polypeptide C-terminal elongation","type":"exact"},{"name":"mutaton causing inframe polypeptide C terminal elongation","type":"exact"}],"termid":"SO:1000108"}


id: PBO:0085505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; has apurinic/apyrimidinic (AP) endonuclease activity; essential for viability; nascent Rps3p is bound by specific chaperone Yar1p during translation; homologous to mammalian ribosomal protein S3 and bacterial S3","termid":"PBO:0085505"}


id: GO:0019172
data:
  {"annotated_genes":["SJAG_04404","SJAG_02988","SJAG_04674","SJAG_02106"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59306,61071,73299,74835],"is_not":false,"summary":null,"term":"GO:0019172"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: methylglyoxal + H2O = D-lactate.","definition_xrefs":["PMID:21696459","PMID:7848303","GOC:mcc","RHEA:27754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02106":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"glyoxalase III activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["EC:4.2.1.130","MetaCyc:GLYOXIII-RXN"],"synonyms":[{"name":"(R)-lactate hydro-lyase","type":"exact"},{"name":"D-lactate dehydratase","type":"exact"},{"name":"glutathione-independent glyoxalase activity","type":"related"}],"termid":"GO:0019172","terms_by_termid":{"GO:0019172":null}}


id: GO:0140873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of paxilline, a mycotoxin that acts as an inhibitor of mammalian maxi-K channels.","definition_xrefs":["PMID:23949005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid indole alkaloid biosynthetic process","termid":"GO:0009709"},{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"paxilline biosynthetic process","secondary_identifiers":["MetaCyc:PWY-7493"],"synonyms":[{"name":"paxilline anabolism","type":"exact"},{"name":"paxilline biosynthesis","type":"exact"},{"name":"paxilline formation","type":"exact"},{"name":"paxilline synthesis","type":"exact"}],"termid":"GO:0140873"}


id: PBO:0031862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_component_organization_phenotype","termid":"PBO:0031862"}


id: GO:1903312
data:
  {"annotated_genes":["SJAG_03883","SJAG_00797","SJAG_03283","SJAG_02370","SJAG_02573","SJAG_04946","SJAG_03696","SJAG_04825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79068,79131,100432,90515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[71066,89811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[90111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[91999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mRNA metabolic process.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA metabolic process","termid":"GO:0051253"},{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"negatively_regulates","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_02370":null,"SJAG_02573":null,"SJAG_03283":null,"SJAG_03696":null,"SJAG_03883":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mRNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mRNA metabolic process","type":"exact"},{"name":"down regulation of mRNA metabolism","type":"exact"},{"name":"down-regulation of mRNA metabolic process","type":"exact"},{"name":"down-regulation of mRNA metabolism","type":"exact"},{"name":"downregulation of mRNA metabolic process","type":"exact"},{"name":"downregulation of mRNA metabolism","type":"exact"},{"name":"inhibition of mRNA metabolic process","type":"narrow"},{"name":"inhibition of mRNA metabolism","type":"narrow"},{"name":"negative regulation of mRNA metabolism","type":"exact"}],"termid":"GO:1903312","terms_by_termid":{"GO:0048255":null,"GO:0060212":null,"GO:0070935":null,"GO:0120271":null}}


id: MONDO:0032672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, neurodevelopmental disorder characterized by global developmental delay, congenital heart defects, generalized hypertrichosis and dysmorphic facial features, most commonly triangular face, thick arched eyebrows, widely spaced eyes, posteriorly rotated low set ears, depressed nasal bridge, broad nasal root and tip, and pointed chin.","definition_xrefs":["Orphanet:562569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with cardiac defects and dysmorphic facies","secondary_identifiers":["MEDGEN:1675627","OMIM:618316","UMLS:C5193024","GARD:17998"],"synonyms":[{"name":"IDDCDF","type":"related"},{"name":"TMEM94-associated congenital heart defect-facial dysmorphism-developmental delay syndrome","type":"exact"},{"name":"intellectual developmental disorder with cardiac defects and dysmorphic facies","type":"exact"}],"termid":"MONDO:0032672","xrefs":{"Monarch":{"xref_id":"0032672"}}}


id: GO:0070073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which voltage-gated calcium channels become localized together in high densities.","definition_xrefs":["GOC:sart","PMID:18385325","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ion channel clustering","termid":"GO:0045161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"clustering of voltage-gated calcium channels","synonyms":[{"name":"clustering of voltage gated calcium channels","type":"exact"},{"name":"clustering of voltage-dependent calcium channels","type":"exact"},{"name":"voltage-gated calcium channel clustering","type":"exact"}],"termid":"GO:0070073"}


id: MONDO:0010647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the TEX11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, X-linked, 2","secondary_identifiers":["GARD:15302","MEDGEN:374322","DOID:0070185","OMIM:309120","UMLS:C1839841"],"synonyms":[{"name":"Male infertility from defect in meiosis","type":"related"},{"name":"SPGFX2","type":"related"},{"name":"TEX11 azoospermia","type":"exact"},{"name":"azoospermia caused by mutation in TEX11","type":"exact"},{"name":"spermatogenic failure, X-linked, 2","type":"exact"},{"name":"spermatogenic failure, X-linked, 2, X-linked recessive","type":"exact"},{"name":"spermatogenic failure, X-linked, type 2","type":"exact"}],"termid":"MONDO:0010647","xrefs":{"Monarch":{"xref_id":"0010647"}}}


id: PATO:0000418
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000418 relative number value (obsolete PATO:0000418)","termid":"PATO:0000418"}


id: PATO:0001198
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001198 unmodified direction (obsolete PATO:0001198)","termid":"PATO:0001198"}


id: MONDO:0022862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cormier Rustin Munnich syndrome","termid":"MONDO:0022862","xrefs":{"Monarch":{"xref_id":"0022862"}}}


id: GO:0048262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of asymmetry from the dorsal to the ventral side; as, the dorsoventral axis.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of bilateral symmetry","termid":"GO:0009855"},{"relation_name":"part_of","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of dorsal/ventral asymmetry","synonyms":[{"name":"determination of adaxial/abaxial asymmetry","type":"related"},{"name":"determination of dorsal-ventral asymmetry","type":"exact"},{"name":"determination of dorsoventral asymmetry","type":"exact"}],"termid":"GO:0048262"}


id: GO:0031208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a POZ (poxvirus and zinc finger) domain of a protein, a protein-protein interaction domain found in many transcription factors.","definition_xrefs":["PMID:7958847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"POZ domain binding","synonyms":[{"name":"BTB domain","type":"exact"},{"name":"broad-complex, tramtrack, and bric-a-brac domain binding","type":"exact"}],"termid":"GO:0031208"}


id: FYPO:0008001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to menadione when the cell population is in stationary phase. Cells stop growing (and may die) at a concentration of menadione that allows wild type cells to grow.","definition_xrefs":["PMID:35618649","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical in stationary phase","termid":"FYPO:0008000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to menadione in stationary phase","synonyms":[{"name":"sensitive to menadione during stationary phase","type":"exact"}],"termid":"FYPO:0008001"}


id: PBO:0061170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (CTG) 1-1","termid":"PBO:0061170"}


id: PBO:0069490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 757, pseudogene","termid":"PBO:0069490"}


id: FYPO:0002556
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex of a cell is decreased, and the protein is instead detected distributed throughout the cell cortex of half of the cell nearer the non-growing end. There may be little or no protein detected at the medial cortex.","definition_xrefs":["PomBase:mah","PomBase:vw","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to medial cortex, with protein distributed in cell cortex, during vegetative growth","termid":"FYPO:0006638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to medial cortex, with protein distributed in cell cortex near non-growing end, during vegetative growth","synonyms":[{"name":"abolished protein localization to medial cortex during vegetative growth, with protein distributed in cortex of non-growing half of cell","type":"narrow"},{"name":"decreased protein localisation to medial cortex during vegetative growth, with protein distributed in cell cortex near non-growing end","type":"exact"},{"name":"decreased protein localization to medial cortex during vegetative growth, with protein distributed in cell cortex near non-growing end","type":"exact"},{"name":"decreased protein localization to medial cortex during vegetative growth, with protein distributed in cell cortex near non-growing end, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to medial cortex during vegetative growth, with protein distributed in cortex of non-growing half of cell","type":"exact"},{"name":"decreased protein localization to medial ring, with protein distributed in cell cortex near non-growing end, during vegetative growth","type":"exact"},{"name":"reduced protein localization to medial cortex during vegetative growth, with protein distributed in cell cortex near non-growing end","type":"exact"}],"termid":"FYPO:0002556"}


id: PR:Q9UUB0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrps17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUB0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S17, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.14c","synonyms":[{"name":"Spom972h-mrps17","type":"exact"}],"termid":"PR:Q9UUB0"}


id: PBO:0080238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 1","termid":"PBO:0080238"}


id: PBO:0036084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_TR_box","termid":"PBO:0036084"}


id: SO:0000668
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against an EST sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_sequence_match","termid":"SO:0000102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST_match","synonyms":[{"name":"EST match","type":"exact"}],"termid":"SO:0000668"}


id: MONDO:0017342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"virus associated tumor","termid":"MONDO:0017341"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein-Barr virus-related tumor","secondary_identifiers":["UMLS:C5679942","GARD:21146","Orphanet:289638","MEDGEN:1842315"],"synonyms":[{"name":"EBV-related tumor","type":"exact"},{"name":"EBV-related tumour","type":"exact"}],"termid":"MONDO:0017342","xrefs":{"Monarch":{"xref_id":"0017342"}}}


id: GO:0006175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate biosynthetic process","termid":"GO:0009216"},{"relation_name":"is_a","term_name":"dATP metabolic process","termid":"GO:0046060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dATP biosynthetic process","synonyms":[{"name":"dATP anabolism","type":"exact"},{"name":"dATP biosynthesis","type":"exact"},{"name":"dATP formation","type":"exact"},{"name":"dATP synthesis","type":"exact"}],"termid":"GO:0006175"}


id: GO:0019859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving thymine, 5-methyluracil, one of the two major pyrimidine bases present (as thymidine) in DNA but not found in RNA other than (as ribothymidine) in transfer RNA, where it is a minor base.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"thymine metabolic process","synonyms":[{"name":"thymine metabolism","type":"exact"}],"termid":"GO:0019859"}


id: PBO:0084466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase-responsive inhibitor of the Ste12p transcription factor; involved in the regulation of mating-specific genes and the invasive growth pathway; related regulators Dig1p and Dig2p bind to Ste12p; DIG2 has a paralog, DIG1, that arose from the whole genome duplication","termid":"PBO:0084466"}


id: GO:0046596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the viral entry into the host cell.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by symbiont of entry into host","termid":"GO:0052372"},{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"regulates","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral entry into host cell","synonyms":[{"name":"regulation of viral penetration into host cell","type":"exact"},{"name":"viral escort protein","type":"related"}],"termid":"GO:0046596"}


id: MONDO:1012842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive retinal atrophy that occurs in dogs due to a mutation in the IMPG2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, IMPG2-related, dog","secondary_identifiers":["OMIA:002289-9615"],"synonyms":[{"name":"PRA4","type":"exact"},{"name":"progressive retinal atrophy 4, dog","type":"related"}],"termid":"MONDO:1012842","xrefs":{"Monarch":{"xref_id":"1012842"}}}


id: GO:0005930
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The bundle of microtubules and associated proteins that forms the core of cilia (also called flagella) in eukaryotic cells and is responsible for their movements.","definition_xrefs":["GOC:cilia","ISBN:0198547684","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"ciliary plasm","termid":"GO:0097014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axoneme","secondary_identifiers":["Wikipedia:Axoneme","GO:0035086","GO:0035085"],"synonyms":[{"name":"ciliary axoneme","type":"exact"},{"name":"cilium axoneme","type":"exact"},{"name":"flagellar axoneme","type":"exact"},{"name":"flagellum axoneme","type":"exact"}],"termid":"GO:0005930"}


id: PBO:0046019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 alpha kinase 4","termid":"PBO:0046019"}


id: PBO:0066244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif single stranded interacting protein 1 pseudogene 1","termid":"PBO:0066244"}


id: MONDO:0006210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A distinctive type of liver cell carcinoma that arises in non-cirrhotic livers and is seen predominantly in young patients. The tumor cells are polygonal and deeply eosinophilic, and are embedded in a fibrous stroma. The prognosis is similar to classical hepatocellular carcinoma that arises in non-cirrhotic livers, and better than hepatocellular carcinoma that arises in cirrhotic livers.","definition_xrefs":["NCIT:C4131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatocellular carcinoma","termid":"MONDO:0007256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"fibrolamellar hepatocellular carcinoma","secondary_identifiers":["Orphanet:401920","GARD:21704","EFO:1000256","ICDO:8171/3","MEDGEN:83122","DOID:5015","UMLS:C0334287","MESH:C537258","ONCOTREE:FLC","SCTID:253018005"],"synonyms":[{"name":"FHCC","type":"exact"},{"name":"FL-HCC","type":"related"},{"name":"FLC","type":"exact"},{"name":"eosinophilic glassy cell hepatoma","type":"related"},{"name":"eosinophilic hepatocellular carcinoma with lamellar fibrosis","type":"related"},{"name":"fibrolamellar cancer","type":"exact"},{"name":"fibrolamellar carcinoma","type":"exact"},{"name":"fibrolamellar carcinoma of liver cells","type":"exact"},{"name":"fibrolamellar carcinoma of the liver cells","type":"exact"},{"name":"fibrolamellar hepatocarcinoma","type":"exact"},{"name":"fibrolamellar hepatocellular carcinoma","type":"exact"},{"name":"fibrolamellar oncocytic hepatoma","type":"related"},{"name":"fibrolamellar variant of hepatocellular carcinoma","type":"related"},{"name":"hepatocellular carcinoma (fibrolamellar variant)","type":"related"},{"name":"hepatocellular carcinoma with increased stromal fibrosis","type":"related"},{"name":"hepatocellular carcinoma, fibrolamellar","type":"exact"},{"name":"hepatocellular fibrolamellar carcinoma","type":"exact"},{"name":"liver cell fibrolamellar carcinoma","type":"exact"},{"name":"oncocytic hepatocellular tumor","type":"exact"},{"name":"oncocytic hepatocellular tumour","type":"exact"},{"name":"polygonal cell hepatocellular carcinoma with fibrous stroma","type":"related"},{"name":"polygonal cell type hepatocellular carcinoma with fibrous Stroma","type":"exact"}],"termid":"MONDO:0006210","xrefs":{"Monarch":{"xref_id":"0006210"}}}


id: PBO:0091121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA amidotransferase complex subunit Gta3","termid":"PBO:0091121"}


id: GO:1901783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of p-cumate.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:8631713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"p-cumate metabolic process","termid":"GO:1901781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"p-cumate biosynthetic process","synonyms":[{"name":"p-cumate anabolism","type":"exact"},{"name":"p-cumate biosynthesis","type":"exact"},{"name":"p-cumate formation","type":"exact"},{"name":"p-cumate synthesis","type":"exact"}],"termid":"GO:1901783"}


id: PBO:0048977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain containing 1","termid":"PBO:0048977"}


id: PR:P32834
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sxa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P32834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic proteinase sxa1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.01","synonyms":[{"name":"Spom972h-sxa1","type":"exact"}],"termid":"PR:P32834"}


id: PBO:0045637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 49 (pseudogene)","termid":"PBO:0045637"}


id: MONDO:0045011
data:
  {"annotated_genes":["SJAG_03158","SJAG_04565","SJAG_00104","SJAG_04167","SJAG_01878","SJAG_02698","SJAG_02488","SJAG_01938","SJAG_04865","SJAG_03349","SJAG_00580","SJAG_03352","SJAG_01474","SJAG_05011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007048"},{"annotations":[85859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033014"},{"annotations":[86350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014131"},{"annotations":[86064,86065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009440"},{"annotations":[85365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007858"},{"annotations":[87065,87063,87064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008416"},{"annotations":[87430,87431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008293"},{"annotations":[86479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013868"},{"annotations":[86341,86342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014713"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00580":null,"SJAG_01474":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02488":null,"SJAG_02698":null,"SJAG_03158":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_04167":null,"SJAG_04565":null,"SJAG_04865":null,"SJAG_05011":null},"genotype_count":0,"is_obsolete":false,"name":"keratinization disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0475811","SCTID:277905003","MEDGEN:635020"],"synonyms":[{"name":"disorder of keratinization","type":"exact"},{"name":"keratinization disease","type":"exact"}],"termid":"MONDO:0045011","terms_by_termid":{"MONDO:0007048":null,"MONDO:0007858":null,"MONDO:0008293":null,"MONDO:0008416":null,"MONDO:0009440":null,"MONDO:0013868":null,"MONDO:0014131":null,"MONDO:0014713":null,"MONDO:0033014":null},"xrefs":{"Monarch":{"xref_id":"0045011"}}}


id: SO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequences within the intron that modulate splice site selection for some introns.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_enhancer","termid":"SO:0000344"},{"relation_name":"part_of","term_name":"spliceosomal_intron_region","termid":"SO:0000841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intronic_splice_enhancer","synonyms":[{"name":"intronic splice enhancer","type":"exact"}],"termid":"SO:0000320"}


id: GO:0000017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of alpha-glucosides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Alpha-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in an alpha configuration.","definition_xrefs":["GOC:jl","ISBN:0198506732","PMID:9919658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transport","termid":"GO:0042946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"alpha-glucoside transport","termid":"GO:0000017"}


id: GO:1904787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of asymmetric protein localization involved in cell fate determination.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:17476329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of asymmetric protein localization involved in cell fate determination","termid":"GO:1904785"},{"relation_name":"positively_regulates","term_name":"asymmetric protein localization involved in cell fate determination","termid":"GO:0045167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of asymmetric protein localization involved in cell fate determination","synonyms":[{"name":"activation of asymmetric protein localisation involved in cell fate determination","type":"narrow"},{"name":"activation of asymmetric protein localization involved in cell fate commitment","type":"narrow"},{"name":"activation of asymmetric protein localization involved in cell fate determination","type":"narrow"},{"name":"activation of asymmetric protein localization resulting in cell fate commitment","type":"narrow"},{"name":"activation of cell fate commitment, asymmetric protein localization","type":"narrow"},{"name":"positive regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"positive regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"positive regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"positive regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"up regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"up regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"up regulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"up regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"up regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"up-regulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"up-regulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"up-regulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"up-regulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"up-regulation of cell fate commitment, asymmetric protein localization","type":"exact"},{"name":"upregulation of asymmetric protein localisation involved in cell fate determination","type":"exact"},{"name":"upregulation of asymmetric protein localization involved in cell fate commitment","type":"exact"},{"name":"upregulation of asymmetric protein localization involved in cell fate determination","type":"exact"},{"name":"upregulation of asymmetric protein localization resulting in cell fate commitment","type":"exact"},{"name":"upregulation of cell fate commitment, asymmetric protein localization","type":"exact"}],"termid":"GO:1904787"}


id: GO:0140316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding directly to sorting signals in the cytosolic tails of transmembrane cargos (or transmembrane cargo receptors serving as recognition interfaces for lumenal cargos), to concentrate them into vesicles or tubules for transport via intracellular vesicular transport or the secretory pathway.","definition_xrefs":["PMID:25795254"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicular transport adaptor activity (obsolete GO:0140316)","termid":"GO:0140316"}


id: PBO:0004447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain protein","termid":"PBO:0004447"}


id: GO:0007538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sex determination process that results in the initial specification of sexual status of an individual organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary sex determination","termid":"GO:0007538"}


id: MONDO:0054805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 22, primary, autosomal recessive","secondary_identifiers":["GARD:16279","OMIM:617984","MEDGEN:1635688","UMLS:C4693834"],"synonyms":[{"name":"MCPH22","type":"related"},{"name":"microcephaly 22, PRIMARY, autosomal recessive","type":"related"}],"termid":"MONDO:0054805","xrefs":{"Monarch":{"xref_id":"0054805"}}}


id: MONDO:0009034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniofacial dyssynostosis (CFD) is a rare cranial malformation syndrome characterized by the premature closure of both lambdoid sutures and the posterior sagittal suture, resulting in abnormal skull contour (frontal bossing, anterior turricephaly with mild brachycephaly, biparietal narrowing, occipital concavity) and dysmorphic facial features (low-set ears, midfacial hypoplasia). Short stature, developmental delay, epilepsy, and oculomotor dyspraxia have also been reported. Associated anomalies include enlargement of the cerebral ventricles, agenesis of the corpus callosum, Arnold-Chiari malformation type I, venous anomalies of skull and hydrocephalus.","definition_xrefs":["Orphanet:1516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofacial dyssynostosis","secondary_identifiers":["GARD:1575","MESH:C536455","UMLS:C1857511","MEDGEN:347473","OMIM:218350"],"synonyms":[{"name":"bilateral lambdoid and sagittal synostosis","type":"related"},{"name":"craniofacial dyssynostosis and short stature","type":"related"},{"name":"craniofacial dyssynostosis with short stature","type":"related"},{"name":"craniosynostosis-craniofacial dysostosis syndrome","type":"related"}],"termid":"MONDO:0009034","xrefs":{"Monarch":{"xref_id":"0009034"}}}


id: MONDO:0011703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prion disease","termid":"MONDO:0005429"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spongiform encephalopathy with neuropsychiatric features","secondary_identifiers":["UMLS:C1847650","MESH:C564678","MEDGEN:339812","OMIM:606688"],"synonyms":[{"name":"spongiform encephalopathy with neuropsychiatric features","type":"exact"}],"termid":"MONDO:0011703","xrefs":{"Monarch":{"xref_id":"0011703"}}}


id: PBO:0025420
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosomal storage disorders","termid":"PBO:0025420"}


id: PBO:0065035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 1","termid":"PBO:0065035"}


id: GO:0016673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor","secondary_identifiers":["EC:1.8.7.-"],"synonyms":[{"name":"oxidoreductase activity, acting on sulphur group of donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016673"}


id: GO:0032118
data:
  {"annotated_genes":["SJAG_00368","SJAG_03073","SJAG_04143"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101775,106954,111602],"is_not":false,"summary":null,"term":"GO:0032118"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the horsetail-astral array, a structure of astral microtubules that emanates from the spindle pole body during meiosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"dynein-driven meiotic oscillatory nuclear movement","termid":"GO:0030989"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_03073":null,"SJAG_04143":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0140013","GO:0007049","GO:0008150","GO:0006810","GO:0007010"],"is_obsolete":false,"name":"horsetail-astral microtubule organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"horsetail-astral microtubule array organization","type":"exact"},{"name":"horsetail-astral microtubule organisation","type":"exact"},{"name":"horsetail-astral microtubule organization and biogenesis","type":"related"}],"termid":"GO:0032118","terms_by_termid":{"GO:0032118":null}}


id: PBO:0087342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spermidine synthase; involved in biosynthesis of spermidine and also in biosynthesis of pantothenic acid; spermidine is required for growth of wild-type cells","termid":"PBO:0087342"}


id: GO:1900536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glucose homeostasis.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glucose homeostasis (obsolete GO:1900536)","synonyms":[{"name":"regulation of glucose homeostasis","type":"exact"}],"termid":"GO:1900536"}


id: MONDO:0019195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary inclusion body myopathy type 3 is characterized by congenital joint contractures (normalizing during early childhood), external ophthalmoplegia, and proximal muscle weakness. In adult cases, the muscular weakness is progressive.","definition_xrefs":["Orphanet:79091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy, proximal, and ophthalmoplegia","termid":"MONDO:0011577"},{"relation_name":"is_a","term_name":"hereditary inclusion-body myopathy","termid":"MONDO:0016112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"hereditary inclusion body myopathy-joint contractures-ophthalmoplegia syndrome","secondary_identifiers":["MEDGEN:1382737","UMLS:C4510610","GARD:9494","SCTID:724349009"],"synonyms":[{"name":"HIBM3","type":"exact"},{"name":"Hereditary inclusion body myopathy - joint contractures - ophthalmoplegia","type":"related"},{"name":"Hereditary inclusion body myopathy type 3","type":"related"},{"name":"IBM3","type":"exact"},{"name":"Inclusion body myopathy autosomal dominant","type":"related"},{"name":"Myopathy with congenital joint contractures, ophthalmoplegia, and rimmed vacuoles","type":"related"},{"name":"hereditary inclusion body myopathy type 3","type":"exact"},{"name":"inclusion body myopathy type 3","type":"exact"}],"termid":"MONDO:0019195","xrefs":{"Monarch":{"xref_id":"0019195"}}}


id: GO:0042427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of serotonin (5-hydroxytryptamine), a monoamine neurotransmitter occurring in the peripheral and central nervous systems, also having hormonal properties.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin metabolic process","termid":"GO:0042428"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"serotonin biosynthetic process","secondary_identifiers":["Wikipedia:Serotonin"],"synonyms":[{"name":"serotonin anabolism","type":"exact"},{"name":"serotonin biosynthesis","type":"exact"},{"name":"serotonin formation","type":"exact"},{"name":"serotonin synthesis","type":"exact"}],"termid":"GO:0042427"}


id: PBO:0016981
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OrDered Splicing","termid":"PBO:0016981"}


id: MONDO:0014680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Mendelian susceptibility or predisposition to herpes simplex infection induced encephalitis in which the cause of the diseas is a mutation in the IRF3 gene.","definition_xrefs":["MONDO:patterns/susceptibility_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalopathy, acute, infection-induced","termid":"MONDO:0000166"},{"relation_name":"excluded_subClassOf","term_name":"herpes simplex encephalitis","termid":"MONDO:0012521"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herpes simplex encephalitis, susceptibility to, 7","secondary_identifiers":["UMLS:C4225294","OMIM:616532","MEDGEN:901850"],"synonyms":[{"name":"Herpes simplex encephalitis, susceptibility to, 5","type":"related"},{"name":"Herpes simplex encephalitis, susceptibility to, type 7","type":"exact"},{"name":"IIAE7","type":"related"},{"name":"IRF3 herpes simplex encephalitis","type":"exact"},{"name":"encephalopathy, acute, infection-induced (HERPES-specific), susceptibility to, 7","type":"related"},{"name":"encephalopathy, acute, infection-induced (Herpes-specific), susceptibility to, 7","type":"related"},{"name":"encephalopathy, acute, infection-induced, susceptibility to, 7","type":"related"},{"name":"herpes simplex encephalitis caused by mutation in IRF3","type":"exact"},{"name":"herpes simplex encephalitis, susceptibility to, 7","type":"exact"}],"termid":"MONDO:0014680","xrefs":{"Monarch":{"xref_id":"0014680"}}}


id: GO:0055105
data:
  {"annotated_genes":["SJAG_02485","SJAG_01515","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115016],"is_not":false,"summary":null,"term":"GO:0055105"},{"annotations":[99024,115950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990948"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a ubiquitin-protein transferase.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"ubiquitin-protein transferase regulator activity","termid":"GO:0055106"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01515":null,"SJAG_02485":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0004857","GO:0003674","GO:0140678"],"is_obsolete":false,"name":"ubiquitin-protein transferase inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055105","terms_by_termid":{"GO:0055105":null,"GO:1990948":null}}


id: MONDO:0015154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rickettsial disease (obsolete MONDO:0015154)","termid":"MONDO:0015154","xrefs":{"Monarch":{"xref_id":"0015154"}}}


id: MONDO:0020545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Staphylococcal toxic shock syndrome (staphylococcal TSS) is an acute disease mediated by the production of superantigenic toxins, characterized by high fever, skin rash followed by skin peeling, hypotension, vomiting, diarrhea and potentially leading to multisystem organ failure and caused by a Staphylococcus aureus bacterial infection.","definition_xrefs":["Orphanet:99919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic shock syndrome","termid":"MONDO:0001881"},{"relation_name":"is_a","term_name":"staphylococcal toxemia","termid":"MONDO:0017592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal toxic-shock syndrome","secondary_identifiers":["MedDRA:10044250","SCTID:240450004","ICD9:040.89","GARD:19710","MEDGEN:811401","icd11.foundation:788554020","UMLS:C3714602"],"synonyms":[{"name":"Staphylococcus caused toxic shock syndrome","type":"exact"},{"name":"Staphylococcus toxic shock syndrome","type":"exact"},{"name":"staphylococcal TSS","type":"exact"}],"termid":"MONDO:0020545","xrefs":{"Monarch":{"xref_id":"0020545"}}}


id: GO:0022629
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The small subunit of a ribosome contained within a chloroplast.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid small ribosomal subunit","termid":"GO:0000312"},{"relation_name":"part_of","term_name":"chloroplast ribosome","termid":"GO:0043253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"chloroplast small ribosomal subunit","synonyms":[{"name":"chloroplast ribosomal SSU complex","type":"exact"},{"name":"chloroplast ribosomal small subunit complex","type":"exact"}],"termid":"GO:0022629"}


id: PBO:0059785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 11","termid":"PBO:0059785"}


id: MONDO:0004634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the vein.","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vein disorder","secondary_identifiers":["UMLS:C0235522","DOID:866","ICD9:453","SCTID:90507008","MEDGEN:115992","NCIT:C35279"],"synonyms":[{"name":"disease of vein","type":"exact"},{"name":"disease or disorder of vein","type":"exact"},{"name":"disorder of vein","type":"exact"},{"name":"vein disease","type":"exact"},{"name":"vein disease or disorder","type":"exact"}],"termid":"MONDO:0004634","xrefs":{"Monarch":{"xref_id":"0004634"}}}


id: MONDO:1012378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary pancreatitis, non-human animal","termid":"MONDO:1011679"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary pancreatitis, dog","secondary_identifiers":["OMIA:001403-9615"],"termid":"MONDO:1012378","xrefs":{"Monarch":{"xref_id":"1012378"}}}


id: PBO:0065642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 20C, pseudogene","termid":"PBO:0065642"}


id: GO:0016808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete proprotein convertase activity (obsolete GO:0016808)","synonyms":[{"name":"proprotein convertase activity","type":"exact"}],"termid":"GO:0016808"}


id: FYPO:0001189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cilofungin. Cells stop growing (and may die) at a concentration of cilofungin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to echinocandin","termid":"FYPO:0007947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to cilofungin","synonyms":[{"name":"hypersensitive to cilofungin","type":"exact"},{"name":"sensitive to cilofungin during mitotic cell cycle","type":"related"},{"name":"sensitive to cilofungin during vegetative growth","type":"exact"}],"termid":"FYPO:0001189"}


id: GO:0098918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of synapse","termid":"GO:0098918"}


id: MONDO:0001971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypersensitivity pneumonitis caused by the repeated exposure and inhalation of biological dust (such as hay dust, mold spores, or other agricultural products). It is considered a type II hypersensitivity inflammatory reaction. In the acute phase, signs and symptoms include fever, chills, cough, dyspnea, headache, and chest tightness. The subacute phase manifests as chronic cough, dyspnea, anorexia, and weight loss. The chronic phase results from the prolonged exposure to the antigen and is characterized by severe dyspnea and irreversible damage to the lungs.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"},{"relation_name":"is_a","term_name":"occupational lung disease","termid":"MONDO:0022736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"farmer's lung disease","secondary_identifiers":["NCIT:C34605","UMLS:C0015634","icd11.foundation:666590509","ICD9:495.0","MedDRA:10016221","DOID:14453","MEDGEN:8785","Orphanet:99906","GARD:6427","SCTID:18690003"],"synonyms":[{"name":"Farmers lung","type":"exact"},{"name":"farmer lung","type":"exact"},{"name":"farmer's lung","type":"exact"}],"termid":"MONDO:0001971","xrefs":{"Monarch":{"xref_id":"0001971"}}}


id: GO:0019450
data:
  {"annotated_genes":["SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114319],"is_not":false,"summary":null,"term":"GO:0019450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including pyruvate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"L-cysteine catabolic process","termid":"GO:0019448"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"L-cysteine catabolic process to pyruvate","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:LCYSDEG-PWY"],"synonyms":[{"name":"L-cysteine breakdown to pyruvate","type":"exact"},{"name":"L-cysteine degradation to pyruvate","type":"exact"}],"termid":"GO:0019450","terms_by_termid":{"GO:0019450":null}}


id: GO:0007353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ventral/lateral system (obsolete GO:0007353)","synonyms":[{"name":"ventral/lateral system","type":"exact"}],"termid":"GO:0007353"}


id: FYPO:0005253
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tamoxifen than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to tamoxifen","synonyms":[{"name":"resistance to tamoxifen during mitotic cell cycle","type":"related"},{"name":"resistance to tamoxifen during vegetative growth","type":"exact"},{"name":"resistant to tamoxifen","type":"exact"}],"termid":"FYPO:0005253"}


id: MONDO:1011679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary pancreatitis, non-human animal","secondary_identifiers":["OMIA:001403"],"termid":"MONDO:1011679","xrefs":{"Monarch":{"xref_id":"1011679"}}}


id: GO:0140314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a calcium ion to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:13130076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sequestering activity","termid":"GO:0140487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140313"],"is_obsolete":false,"name":"calcium ion sequestering activity","termid":"GO:0140314"}


id: PR:O74467
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.05","synonyms":[{"name":"Spom972h-set5","type":"exact"}],"termid":"PR:O74467"}


id: FYPO:0003914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is higher than normal when the population in which the cell is found is in stationary phase. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level in stationary phase","synonyms":[{"name":"increased protein accumulation in stationary phase","type":"related"}],"termid":"FYPO:0003914"}


id: GO:0035950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of oligopeptide transport, by regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:17005992","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter (obsolete GO:0035950)","synonyms":[{"name":"regulation of oligopeptide transport by regulation of transcription from Pol II promoter","type":"exact"}],"termid":"GO:0035950"}


id: PBO:0085683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in proteolytic activation of Rim101p; part of response to alkaline pH; interacts with ESCRT-1 subunits Stp22p and Vps28p; essential for anaerobic growth; member of the arrestin-related trafficking adaptor family","termid":"PBO:0085683"}


id: MONDO:0015514
data:
  {"annotated_genes":["SJAG_03418","SJAG_04950","SJAG_02690","SJAG_02294","SJAG_00301","SJAG_04270","SJAG_03720","SJAG_03698","SJAG_04738","SJAG_03597","SJAG_04398","SJAG_04110","SJAG_04148","SJAG_03051","SJAG_02829","SJAG_02339","SJAG_02954","SJAG_04285","SJAG_00377","SJAG_04703","SJAG_00321","SJAG_04114","SJAG_00103"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012794"},{"annotations":[85739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[87196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008980"},{"annotations":[87193],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014455"},{"annotations":[86295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[87577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"},{"annotations":[87282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032787"},{"annotations":[86225,86226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026763"},{"annotations":[87323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030886"},{"annotations":[85831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009514"},{"annotations":[85541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[87284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[85971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[86729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[87530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[86340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[87029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014497"},{"annotations":[85957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[86747,86746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[86042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[86443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[87338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[86932,86931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00301":null,"SJAG_00321":null,"SJAG_00377":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02690":null,"SJAG_02829":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03418":null,"SJAG_03597":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04110":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04270":null,"SJAG_04285":null,"SJAG_04398":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"hereditary endocrine growth disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680637","MEDGEN:1842942","MESH:D006130","GARD:20012","Orphanet:156643"],"synonyms":[{"name":"genetic endocrine growth disease","type":"exact"},{"name":"growth disorder","type":"exact"}],"termid":"MONDO:0015514","terms_by_termid":{"MONDO:0008840":null,"MONDO:0008980":null,"MONDO:0009258":null,"MONDO:0009514":null,"MONDO:0010350":null,"MONDO:0010961":null,"MONDO:0012794":null,"MONDO:0013310":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014455":null,"MONDO:0014497":null,"MONDO:0014843":null,"MONDO:0026763":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0030886":null,"MONDO:0032787":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null},"xrefs":{"Monarch":{"xref_id":"0015514"}}}


id: SO:0001445
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons ACN (ACT, ACC, ACA and ACG).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine","synonyms":[{"name":"T","type":"exact"},{"name":"Thr","type":"exact"}],"termid":"SO:0001445"}


id: PBO:0072816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 11","termid":"PBO:0072816"}


id: FYPO:0001666
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cAMP level","synonyms":[{"name":"normal cellular cAMP level","type":"exact"},{"name":"normal cyclic AMY level","type":"exact"}],"termid":"FYPO:0001666"}


id: MONDO:0011818
data:
  {"annotated_genes":["SJAG_00289","SJAG_02723","SJAG_00991","SJAG_03067","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86940,86941,86942,86943,86944],"is_not":false,"summary":null,"term":"MONDO:0011818"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated focal cortical dysplasia","termid":"MONDO:0019009"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00289":null,"SJAG_00991":null,"SJAG_02723":null,"SJAG_03067":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated focal cortical dysplasia type II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:607341","UMLS:C1846385","GARD:10190","MEDGEN:339510","Orphanet:268994","MESH:C537067"],"synonyms":[{"name":"CDT","type":"related"},{"name":"FCD 2A","type":"related"},{"name":"FCD 2B","type":"related"},{"name":"FCD type II","type":"exact"},{"name":"FCDT","type":"related"},{"name":"FCORD2","type":"related"},{"name":"Fcd2","type":"related"},{"name":"cortical dysplasia of Taylor","type":"related"},{"name":"cortical dysplasia of Taylor with balloon cells","type":"related"},{"name":"cortical dysplasia of Taylor without balloon cells","type":"related"},{"name":"cortical dysplasia of Taylor, dysplasia only","type":"related"},{"name":"cortical dysplasia, Taylor type","type":"exact"},{"name":"focal cortical dysplasia of Taylor","type":"related"},{"name":"focal cortical dysplasia of Taylor, type 2A","type":"related"},{"name":"focal cortical dysplasia of Taylor, type 2B","type":"related"},{"name":"focal cortical dysplasia type 2","type":"related"},{"name":"focal cortical dysplasia type II","type":"related"},{"name":"focal cortical dysplasia, type 2","type":"related"},{"name":"focal cortical dysplasia, type 2A","type":"related"},{"name":"focal cortical dysplasia, type 2B","type":"related"},{"name":"focal cortical dysplasia, type II","type":"related"},{"name":"focal cortical dysplasia, type II, somatic","type":"exact"},{"name":"isolated focal cortical dysplasia type 2","type":"exact"}],"termid":"MONDO:0011818","terms_by_termid":{"MONDO:0011818":null},"xrefs":{"Monarch":{"xref_id":"0011818"}}}


id: PBO:0074007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 8","termid":"PBO:0074007"}


id: GO:0009205
data:
  {"annotated_genes":["SJAG_02009","SJAG_04422","SJAG_03828","SJAG_04495","SJAG_02785","SJAG_03925","SJAG_00438","SJAG_MIT37","SJAG_06621","SJAG_04334","SJAG_00027","SJAG_04849","SJAG_02598","SJAG_03114","SJAG_03660","SJAG_00461","SJAG_00685","SJAG_02038","SJAG_05204","SJAG_05314","SJAG_02107","SJAG_04048","SJAG_00136","SJAG_00605","SJAG_00542","SJAG_04192","SJAG_01298","SJAG_00985","SJAG_00133","SJAG_00839","SJAG_02945","SJAG_02796","SJAG_03373","SJAG_06622","SJAG_01310","SJAG_07003","SJAG_02105","SJAG_01471","SJAG_02369","SJAG_00836","SJAG_MIT09","SJAG_02887","SJAG_04122","SJAG_03903","SJAG_02564","SJAG_00915","SJAG_MIT15","SJAG_02135"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59507,67770,67851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046034"},{"annotations":[109759,105811,105812,106182,109765,103726,116738,95352,98595,109764,98324,94858,103983,109760,109763,106181,78197,109761,105810,109762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[75213,64650,102577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[73415,76373],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[118401],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[102158,119475,93183,89453,104021,103995,119463,108264,119469,95181,93610,94198,109156,108172,116233,103377,105366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[70459],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine ribonucleoside triphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside triphosphate metabolic process","termid":"GO:0009144"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate metabolic process","termid":"GO:0009199"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00438":null,"SJAG_00461":null,"SJAG_00542":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00836":null,"SJAG_00839":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01310":null,"SJAG_01471":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02887":null,"SJAG_02945":null,"SJAG_03114":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03925":null,"SJAG_04048":null,"SJAG_04122":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04422":null,"SJAG_04495":null,"SJAG_04849":null,"SJAG_05204":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleoside triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside triphosphate metabolism","type":"exact"}],"termid":"GO:0009205","terms_by_termid":{"GO:0006110":null,"GO:0006183":null,"GO:0042776":null,"GO:0045820":null,"GO:0046034":null,"GO:0061613":null,"GO:0061621":null,"GO:1905707":null}}


id: GO:0072730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a papulacandin B stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to papulacandin B","termid":"GO:0072730"}


id: GO:0098950
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic early endosome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic early endosome membrane (obsolete GO:0098950)","synonyms":[{"name":"intrinsic to postsynaptic early endosome membrane","type":"narrow"}],"termid":"GO:0098950"}


id: PBO:0085227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Part of a Vps34p phosphatidylinositol 3-kinase complex; functions in carboxypeptidase Y (CPY) sorting; binds Vps30p and Vps34p to promote production of phosphatidylinositol 3-phosphate (PtdIns3P) which stimulates kinase activity; required for overflow degradation of misfolded proteins when ERAD is saturated","termid":"PBO:0085227"}


id: MONDO:0008942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebelloparenchymal disorder II (obsolete MONDO:0008942)","termid":"MONDO:0008942","xrefs":{"Monarch":{"xref_id":"0008942"}}}


id: PBO:0041209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper and W2 domains 1 pseudogene 1","termid":"PBO:0041209"}


id: MONDO:0000581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lambda 5 deficiency (obsolete MONDO:0000581)","termid":"MONDO:0000581","xrefs":{"Monarch":{"xref_id":"0000581"}}}


id: PBO:0001177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-tRNA ligase (predicted)","termid":"PBO:0001177"}


id: PBO:0060093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 40","termid":"PBO:0060093"}


id: GO:0006969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete melanotic tumor response (obsolete GO:0006969)","synonyms":[{"name":"melanotic mass response","type":"exact"},{"name":"melanotic tumor response","type":"exact"}],"termid":"GO:0006969"}


id: PBO:0065520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 2","termid":"PBO:0065520"}


id: PBO:0031603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_S_phase","termid":"PBO:0031603"}


id: FYPO:0006004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule organization is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0031122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal interphase microtubule organization","synonyms":[{"name":"normal cytoplasmic microtubule organization during interphase during vegetative growth","type":"exact"},{"name":"normal cytoplasmic microtubule organization during interphase of mitotic cell cycle","type":"exact"},{"name":"normal cytoplasmic microtubule organization during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubule organization","type":"exact"},{"name":"normal interphase microtubule organisation","type":"exact"}],"termid":"FYPO:0006004"}


id: GO:0098890
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the postsynaptic membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:autophagy","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of synaptic membrane","termid":"GO:0099243"},{"relation_name":"part_of","term_name":"postsynaptic membrane","termid":"GO:0045211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of postsynaptic membrane","termid":"GO:0098890"}


id: PBO:0038275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_insertion_and_mutation","termid":"PBO:0038275"}


id: PBO:0055219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2645","termid":"PBO:0055219"}


id: FYPO:0003434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ornithine carbamoyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal ornithine carbamoyltransferase activity","termid":"FYPO:0003433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0005447","FYPO:0000652","FYPO:0000654","FYPO:0000002"],"is_obsolete":false,"name":"decreased ornithine carbamoyltransferase activity","synonyms":[{"name":"reduced ornithine carbamoyltransferase activity","type":"exact"}],"termid":"FYPO:0003434"}


id: GO:0052723
data:
  {"annotated_genes":["SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115443],"is_not":false,"summary":null,"term":"GO:0052723"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol hexakisphosphate + ATP = 1-diphospho-1D-myo-inositol 2,3,4,5,6-pentakisphosphate + ADP.","definition_xrefs":["RHEA:37459","PMID:18981179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"inositol hexakisphosphate 1-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R05799","MetaCyc:RXN-10972"],"termid":"GO:0052723","terms_by_termid":{"GO:0052723":null}}


id: GO:0097193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway starts with reception of an intracellular signal (e.g. DNA damage, endoplasmic reticulum stress, oxidative stress etc.), and ends when the execution phase of apoptosis is triggered. The intrinsic apoptotic signaling pathway is crucially regulated by permeabilization of the mitochondrial outer membrane (MOMP).","definition_xrefs":["PMID:17340152","PMID:11919192","PMID:18852119","GOC:mtg_apoptosis","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"},{"relation_name":"is_a","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway","secondary_identifiers":["GO:0008629","Reactome:R-HSA-109606"],"synonyms":[{"name":"induction of apoptosis by intracellular signals","type":"related"},{"name":"intrinsic apoptosis","type":"narrow"},{"name":"intrinsic apoptotic pathway","type":"exact"},{"name":"intrinsic apoptotic signalling pathway","type":"exact"},{"name":"mitochondrial-mediated apoptotic pathway","type":"exact"}],"termid":"GO:0097193"}


id: MONDO:0008821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, distal, with intellectual disability and characteristic facies","secondary_identifiers":["OMIM:208081","MESH:C565940","MEDGEN:1844539","UMLS:C5882782"],"synonyms":[{"name":"arthrogryposis, distal, with intellectual disability and characteristic facies","type":"exact"},{"name":"arthrogryposis, distal, with mental retardation and characteristic facies","type":"exact"}],"termid":"MONDO:0008821","xrefs":{"Monarch":{"xref_id":"0008821"}}}


id: PBO:0074262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 4C1","termid":"PBO:0074262"}


id: PBO:0004163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Mak5 (predicted)","termid":"PBO:0004163"}


id: PBO:0001081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNP pseudouridylase box H/ACA snoRNP complex protein (predicted)","termid":"PBO:0001081"}


id: GO:0075239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a diploid cell undergoes meiosis, and the meiotic products acquire specialized features of asexual motile mononucleate flagellated spores called zoospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporangiospore formation","termid":"GO:0034300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zoospore formation","termid":"GO:0075239"}


id: MOD:00705
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to D-valine.","definition_xrefs":["ChEBI:30016","RESID:AA0200","PubMed:15853325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-valine","synonyms":[{"name":"(R)-2-amino-3-methylbutanoic acid","type":"exact"},{"name":"D-Val","type":"exact"},{"name":"D-valine","type":"exact"},{"name":"MOD_RES D-valine","type":"exact"},{"name":"alpha-amino-beta-methylbutyric acid","type":"exact"},{"name":"alpha-aminoisovaleric acid","type":"exact"}],"termid":"MOD:00705"}


id: PBO:0040006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL14EP pseudogene 1","termid":"PBO:0040006"}


id: MOD:01242
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 3x(2)H labeled L-glutamic acid 5-methyl ester.","definition_xrefs":["PubMed:1326520","Unimod:298#E","OMSSA:20"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-glutamic acid 5-methyl ester (Glu)","termid":"MOD:00081"},{"relation_name":"is_a","term_name":"3x(2)H residue methyl ester","termid":"MOD:00617"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3x(2)H labeled L-glutamic acid 5-methyl ester","synonyms":[{"name":"Methyl:2H(3)","type":"related"},{"name":"deuterated methyl ester","type":"related"},{"name":"trideuteromethyle","type":"exact"}],"termid":"MOD:01242"}


id: MONDO:0002208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vulva adenocarcinoma (obsolete MONDO:0002208)","termid":"MONDO:0002208","xrefs":{"Monarch":{"xref_id":"0002208"}}}


id: GO:2001275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of glucose import in response to insulin stimulus.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glucose import in response to insulin stimulus (obsolete GO:2001275)","synonyms":[{"name":"positive regulation of cellular glucose import in response to insulin stimulus","type":"exact"}],"termid":"GO:2001275"}


id: MONDO:0003515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma that arises from the fallopian tube. It is a rare tumor, often found incidentally.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teratoma","termid":"MONDO:0002601"},{"relation_name":"is_a","term_name":"fallopian tube germ cell tumor","termid":"MONDO:0003392"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube teratoma","secondary_identifiers":["DOID:5564","UMLS:C1517127","MEDGEN:309129","NCIT:C40131"],"synonyms":[{"name":"fallopian tube teratoma","type":"exact"}],"termid":"MONDO:0003515","xrefs":{"Monarch":{"xref_id":"0003515"}}}


id: PBO:0041917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonyl reductase 1","termid":"PBO:0041917"}


id: GO:0061713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The step in the formation of the neural tube, where the paired anterior neural folds are brought together and fuse at the dorsal midline.","definition_xrefs":["GOC:dph","PMID:17286298","GOC:hal","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube closure","termid":"GO:0060606"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior neural tube closure","termid":"GO:0061713"}


id: PBO:0044615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 17","termid":"PBO:0044615"}


id: MONDO:0800304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuropathy, hereditary sensory and autonomic, type IId","secondary_identifiers":["UMLS:C4012054","MEDGEN:860491"],"synonyms":[{"name":"HSAN2D","type":"exact"}],"termid":"MONDO:0800304","xrefs":{"Monarch":{"xref_id":"0800304"}}}


id: GO:0071769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components, including arabinogalactan mycolate and trehalose dimycolate, to form the mycolate layer of the Actinobacterium-type cell wall. The mycolate layer is physically attached to the peptidoglycan layer.","definition_xrefs":["MetaCyc:PWY-6397","PMID:15653820","PMID:3149973","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"Actinobacterium-type cell wall biogenesis","termid":"GO:0071766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"mycolate cell wall layer assembly","synonyms":[{"name":"mycolate cell wall layer biogenesis","type":"related"}],"termid":"GO:0071769"}


id: FYPO:0004595
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which gamma-tubulin complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal gamma-tubulin complex assembly","synonyms":[{"name":"abnormal gamma-tubulin complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal gamma-tubulin complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0004595"}


id: PBO:0056632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 12","termid":"PBO:0056632"}


id: PBO:0031205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_during_cellular_response_to_osmotic_stress","termid":"PBO:0031205"}


id: PBO:0043554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type IV alpha 3 chain","termid":"PBO:0043554"}


id: GO:0018333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-threonine to form O-phospho-L-threonine.","definition_xrefs":["RESID:AA0038"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-phospho-L-threonine (obsolete GO:0018333)","termid":"GO:0018333"}


id: FYPO:0006452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed processivity of a histone H3 acetyltransferase activity is lower than normal. Processivity refers to the number of methylation reactions catalyzed (methyl residues added) per histone binding event.","definition_xrefs":["PomBase:mah","PMID:26401015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone acetyltransferase activity","termid":"FYPO:0006453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000652","FYPO:0005447","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3 acetyltransferase processivity","synonyms":[{"name":"decreased H3 histone acetyltransferase processivity","type":"exact"},{"name":"reduced histone H3 acetyltransferase processivity","type":"exact"}],"termid":"FYPO:0006452"}


id: PBO:0041217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor pseudogene 5","termid":"PBO:0041217"}


id: PBO:0087548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; one of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); part of the TauA domain of TFIIIC that binds BoxA DNA promoter sites of tRNA and similar genes; has TPR motifs; human homolog is TFIIIC-102","termid":"PBO:0087548"}


id: PBO:0076146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate receptor 1","termid":"PBO:0076146"}


id: PR:Q9UTT1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp15 gene.","definition_xrefs":["UniProtKB:Q9UTT1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.02c","synonyms":[{"name":"Spom972h-ubp15","type":"exact"},{"name":"deubiquitinating enzyme 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTT1"}


id: GO:0038039
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains two G protein-coupled receptors (GPCRs) of different subtypes. Formation of a GPCR heterodimer may alter the functional property of the GPCR.","definition_xrefs":["GOC:bf","PMID:16109836","PMID:20150590","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor dimeric complex","termid":"GO:0038037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"G protein-coupled receptor heterodimeric complex","synonyms":[{"name":"G-protein coupled receptor heterodimer","type":"exact"},{"name":"G-protein coupled receptor heterodimeric complex","type":"exact"},{"name":"GPCR heterodimer","type":"exact"}],"termid":"GO:0038039"}


id: PBO:0091610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-V, S-(hydroxymethyl)glutathione synthase","termid":"PBO:0091610"}


id: MONDO:0010038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Growth delay due to IGF-I resistance is characterized by variable intrauterine and postnatal growth retardation and elevated serum IGF-I levels. Addition features include variable degrees of intellectual deficit, microcephaly and dysmorphism (broad nasal bridge and tip, smooth philtrum, thin upper and everted lower lips, short fingers, clinodactyly, wide-set nipples and pectus excavatum).","definition_xrefs":["Orphanet:73273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"growth hormone insensitivity syndrome","termid":"MONDO:0015892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth delay due to insulin-like growth factor I resistance","secondary_identifiers":["MESH:C564816","OMIM:270450","UMLS:C1849157","SCTID:715625007","icd11.foundation:272435490","MEDGEN:338622","NANDO:2200320","GARD:10609"],"synonyms":[{"name":"IGF-1 resistance","type":"related"},{"name":"IGF-I resistance","type":"related"},{"name":"IGF1RES","type":"related"},{"name":"Somatomedin end-organ insensitivity to","type":"related"},{"name":"Somatomedin, end-organ insensitivity to","type":"related"},{"name":"Somatomedin-C, resistance to","type":"related"},{"name":"Somatomedin-c resistance to","type":"related"},{"name":"growth delay due to insulin-like growth factor I resistance","type":"exact"},{"name":"insulin-like Growth Factor I, resistance to, due to increased binding Protein","type":"related"},{"name":"insulin-like growth factor 1 resistance to","type":"related"},{"name":"insulin-like growth factor I, resistance to","type":"related"},{"name":"resistance to IGF-1","type":"exact"}],"termid":"MONDO:0010038","xrefs":{"Monarch":{"xref_id":"0010038"}}}


id: GO:0032992
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A macromolecular complex containing separate protein and carbohydrate molecules. Separate in this context means not covalently bound to each other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein-carbohydrate complex","termid":"GO:0032992"}


id: PBO:0080809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 5","termid":"PBO:0080809"}


id: PBO:0076323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synergin gamma","termid":"PBO:0076323"}


id: PBO:0070804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 34","termid":"PBO:0070804"}


id: PBO:0071152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 17","termid":"PBO:0071152"}


id: PR:Q92357
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cfr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell fusion protein cfr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.12","synonyms":[{"name":"CHS5-related protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cfr1","type":"exact"}],"termid":"PR:Q92357"}


id: GO:0019698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-galacturonate, the D-enantiomer of galacturonate, the anion of galacturonic acid.","definition_xrefs":["GOC:mah","GOC:jsg","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"},{"relation_name":"is_a","term_name":"D-galacturonate metabolic process","termid":"GO:0046396"},{"relation_name":"is_a","term_name":"galacturonate catabolic process","termid":"GO:0046397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"D-galacturonate catabolic process","secondary_identifiers":["MetaCyc:GALACTUROCAT-PWY"],"synonyms":[{"name":"D-galacturonate breakdown","type":"exact"},{"name":"D-galacturonate catabolism","type":"exact"},{"name":"D-galacturonate degradation","type":"exact"}],"termid":"GO:0019698"}


id: MONDO:0009596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metaphyseal chondrodysplasia","termid":"MONDO:0000138"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal chondrodysplasia, Pena type","secondary_identifiers":["MEDGEN:343289","MESH:C565399","OMIM:250300","UMLS:C1855195"],"synonyms":[{"name":"metaphyseal chondrodysplasia, Pena type","type":"exact"}],"termid":"MONDO:0009596","xrefs":{"Monarch":{"xref_id":"0009596"}}}


id: GO:0030511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TGF-beta receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta receptor signaling pathway","termid":"GO:0017015"},{"relation_name":"is_a","term_name":"positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090100"},{"relation_name":"is_a","term_name":"positive regulation of cellular response to transforming growth factor beta stimulus","termid":"GO:1903846"},{"relation_name":"positively_regulates","term_name":"transforming growth factor beta receptor signaling pathway","termid":"GO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of transforming growth factor beta receptor signaling pathway","synonyms":[{"name":"activation of transforming growth factor beta receptor signaling pathway","type":"narrow"},{"name":"positive regulation of TGF-beta receptor signaling pathway","type":"exact"},{"name":"positive regulation of TGFbeta receptor signaling pathway","type":"exact"},{"name":"positive regulation of transforming growth factor beta receptor signalling pathway","type":"exact"},{"name":"stimulation of transforming growth factor beta receptor signaling pathway","type":"narrow"},{"name":"up regulation of transforming growth factor beta receptor signaling pathway","type":"exact"},{"name":"up-regulation of transforming growth factor beta receptor signaling pathway","type":"exact"},{"name":"upregulation of transforming growth factor beta receptor signaling pathway","type":"exact"}],"termid":"GO:0030511"}


id: PBO:0030464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromosomal_translocation","termid":"PBO:0030464"}


id: GO:0051684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the Golgi is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi localization","termid":"GO:0051645"},{"relation_name":"is_a","term_name":"maintenance of organelle location","termid":"GO:0051657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of Golgi location","synonyms":[{"name":"maintenance of Golgi apparatus localization","type":"exact"},{"name":"maintenance of Golgi body localization","type":"exact"},{"name":"maintenance of Golgi localization","type":"related"}],"termid":"GO:0051684"}


id: PBO:0083587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YDR535C is not an essential gene","termid":"PBO:0083587"}


id: MONDO:0008579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toes, relative length of first and second","secondary_identifiers":["UMLS:C1861059","OMIM:189200","MEDGEN:396051"],"synonyms":[{"name":"toes, relative length of first and second","type":"exact"}],"termid":"MONDO:0008579","xrefs":{"Monarch":{"xref_id":"0008579"}}}


id: MONDO:0004555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An angiomyolipoma arising from the kidney.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"},{"relation_name":"is_a","term_name":"angiomyolipoma","termid":"MONDO:0002603"},{"relation_name":"is_a","term_name":"benign PEComa","termid":"MONDO:0020581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney angiomyolipoma","secondary_identifiers":["NCIT:C3888","SCTID:254921004","UMLS:C0241961","MEDGEN:69146","ONCOTREE:RAML","DOID:8411"],"synonyms":[{"name":"RAML","type":"related"},{"name":"angiomyolipoma of kidney","type":"exact"},{"name":"angiomyolipoma of the kidney","type":"exact"},{"name":"kidney angiomyolipoma","type":"exact"},{"name":"renal angiomyolipoma","type":"exact"}],"termid":"MONDO:0004555","xrefs":{"Monarch":{"xref_id":"0004555"}}}


id: PBO:0044015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 delta","termid":"PBO:0044015"}


id: PBO:0047260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member C","termid":"PBO:0047260"}


id: GO:0034460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a uropod by rearrangement of the cytoskeleton and overlying membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uropod organization","termid":"GO:0032796"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"uropod assembly","synonyms":[{"name":"uropod formation","type":"exact"}],"termid":"GO:0034460"}


id: GO:0071889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 14-3-3 protein. A 14-3-3 protein is any of a large family of approximately 30kDa acidic proteins which exist primarily as homo- and heterodimers within all eukaryotic cells, and have been implicated in the modulation of distinct biological processes by binding to specific phosphorylated sites on diverse target proteins, thereby forcing conformational changes or influencing interactions between their targets and other molecules. Each 14-3-3 protein sequence can be roughly divided into three sections: a divergent amino terminus, the conserved core region and a divergent carboxy-terminus. The conserved middle core region of the 14-3-3s encodes an amphipathic groove that forms the main functional domain, a cradle for interacting with client proteins.","definition_xrefs":["PMID:15167810","GOC:mah","PMID:19575580","GOC:cna"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"14-3-3 protein binding","termid":"GO:0071889"}


id: GO:1901089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any acetate ester metabolic process that is involved in fermentation.","definition_xrefs":["GOC:TermGenie","GOC:sgd_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"},{"relation_name":"part_of","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"acetate ester metabolic process involved in fermentation","synonyms":[{"name":"acetate ester metabolic process during fermentation","type":"exact"}],"termid":"GO:1901089"}


id: MONDO:0019180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of angiogenesis leading to arteriovenous dilatations: cutaneo-mucosal hemorrhagic telangiectasias and visceral shunting.","definition_xrefs":["Orphanet:774"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin vascular disease","termid":"MONDO:0019293"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"telangiectasis","termid":"MONDO:0001576"},{"relation_name":"is_a","term_name":"capillary malformation","termid":"MONDO:0016231"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"hereditary hemorrhagic telangiectasia","secondary_identifiers":["ICD9:448.0","MESH:D013683","SCTID:21877004","NANDO:2201034","DOID:1270","NANDO:2100296","NCIT:C35064","NORD:1229","UMLS:C0039445","ICD10CM:I78.0","MEDGEN:52657","MedDRA:10019883","NANDO:1200744","OMIMPS:187300","GARD:6626","icd11.foundation:714406192"],"synonyms":[{"name":"HHT","type":"exact"},{"name":"Osler hemorrhagic telangiectasia syndrome","type":"exact"},{"name":"Osler-Weber-Rendu disease","type":"exact"},{"name":"Rendu-Osler disease","type":"exact"},{"name":"Rendu-Osler-Weber disease","type":"exact"},{"name":"hereditary hemorrhagic telangiectasia","type":"exact"},{"name":"telangiectasia, hereditary Hemorrahagic, of Rendu, Osler","type":"exact"},{"name":"telangiectasia, hereditary hemorrhagic","type":"exact"}],"termid":"MONDO:0019180","xrefs":{"Monarch":{"xref_id":"0019180"}}}


id: GO:0005359
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose(out) + H(out)+ = glucose(in) + H(in)+. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucose:proton symporter activity","termid":"GO:0005356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"low-affinity D-glucose:proton symporter activity","synonyms":[{"name":"low-affinity glucose:proton symporter activity","type":"exact"},{"name":"low-affinity hydrogen/glucose transporter activity","type":"broad"},{"name":"low-affinity hydrogen:glucose symporter activity","type":"exact"},{"name":"low-affinity hydrogen:glucose transporter activity","type":"broad"}],"termid":"GO:0005359"}


id: PBO:0114671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dihydrolipoamide S-acetyltransferase (e3 component), Lat1","termid":"PBO:0114671"}


id: PBO:0084295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Intra-Golgi v-SNARE; required for transport of proteins between an early and a later Golgi compartment","termid":"PBO:0084295"}


id: GO:0018937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitroglycerin, a well-known nitrate ester and an important component of dynamite and other propellants. Toxic to algae, invertebrate, and vertebrates.","definition_xrefs":["UM-BBD_pathwayID:ng"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitroglycerin metabolic process","secondary_identifiers":["MetaCyc:P201-PWY"],"synonyms":[{"name":"NG metabolic process","type":"exact"},{"name":"NG metabolism","type":"exact"},{"name":"nitroglycerin metabolism","type":"exact"}],"termid":"GO:0018937"}


id: PBO:0084711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane half-type ABC transporter; mediates export of peptides generated upon proteolysis of mitochondrial proteins; plays a role in the regulation of cellular resistance to oxidative stress","termid":"PBO:0084711"}


id: PBO:0089256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap14","termid":"PBO:0089256"}


id: PBO:0082451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2H2-type zinc finger protein required for ribosome assembly; shuttling factor which associates with pre-60S particles in the nucleus, accompanying them to the cytoplasm; cytoplasmic dissociation of Bud20p requires Drg1p; N-terminus harbors a nuclear localization signal (NLS) and a nuclear export signal (NES); cytoplasmic Bud20p is reimported by Kap123-dependent pathway; involved in bud-site selection; diploid mutants display a random budding pattern; similar to human ZNF593","termid":"PBO:0082451"}


id: PBO:0049113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 176","termid":"PBO:0049113"}


id: PBO:0027727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_CDRE_promoter_in_response_to_micafungin","termid":"PBO:0027727"}


id: PBO:0090786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein Cfh1","termid":"PBO:0090786"}


id: PBO:0039765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aprataxin","termid":"PBO:0039765"}


id: PBO:0050263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 41","termid":"PBO:0050263"}


id: MONDO:0001679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete crater-like holes of optic disk (obsolete MONDO:0001679)","secondary_identifiers":["DOID:13295","ICD9:377.22"],"synonyms":[{"name":"crater-like optic disk holes","type":"exact"}],"termid":"MONDO:0001679","xrefs":{"Monarch":{"xref_id":"0001679"}}}


id: GO:0035820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which angiotensin decreases the amount of sodium that is excreted in urine over a unit of time.","definition_xrefs":["GOC:yaf","GOC:mtg_25march11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of renal output by angiotensin","termid":"GO:0003083"},{"relation_name":"is_a","term_name":"negative regulation of renal sodium excretion","termid":"GO:0035814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of renal sodium excretion by angiotensin","termid":"GO:0035820"}


id: PBO:0074574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 30","termid":"PBO:0074574"}


id: PBO:0074731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 89","termid":"PBO:0074731"}


id: PBO:0063427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE4DIP pseudogene 1","termid":"PBO:0063427"}


id: PBO:0089059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 domain subunit G","termid":"PBO:0089059"}


id: PBO:0013455
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A suppresses accumulation of septated cells, but does not restore wild-type checkpoint function, in rad1delta mutant","termid":"PBO:0013455"}


id: PBO:0084374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Long-chain base-1-phosphate phosphatase; specific for dihydrosphingosine-1-phosphate, regulates ceramide and long-chain base phosphates levels, involved in incorporation of exogenous long chain bases in sphingolipids; LCB3 has a paralog, YSR3, that arose from the whole genome duplication","termid":"PBO:0084374"}


id: PBO:0041621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CABP7 divergent transcript","termid":"PBO:0041621"}


id: GO:0086046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which SA node cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"},{"relation_name":"part_of","term_name":"SA node cell action potential","termid":"GO:0086015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during SA node cell action potential","synonyms":[{"name":"membrane depolarization involved in regulation of SA node cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization involved in regulation of SAN cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization involved in regulation of sinoatrial node cardiac muscle cell action potential","type":"exact"},{"name":"membrane depolarization involved in regulation of sinus node cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:0086046"}


id: PBO:0087117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome biogenesis factor required for maturation of 18S rRNA; null mutant is sensitive to hydroxyurea and is delayed in recovering from alpha-factor arrest; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus","termid":"PBO:0087117"}


id: PBO:0048614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 6","termid":"PBO:0048614"}


id: FYPO:0008170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is decreased.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased cyclin-dependent protein kinase activity","termid":"FYPO:0008170"}


id: MONDO:0006263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Langerhans cell histiocytosis (obsolete MONDO:0006263)","termid":"MONDO:0006263","xrefs":{"Monarch":{"xref_id":"0006263"}}}


id: PBO:0058128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4430","termid":"PBO:0058128"}


id: GO:0150158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-34 production.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-34 production","termid":"GO:0150157"},{"relation_name":"positively_regulates","term_name":"interleukin-34 production","termid":"GO:0150155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-34 production","secondary_identifiers":["GO:0150161"],"synonyms":[{"name":"positive regulation of interleukin-34 biosynthetic process","type":"narrow"}],"termid":"GO:0150158"}


id: PBO:0081328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 123, pseudogene","termid":"PBO:0081328"}


id: PBO:0031492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_actomyosin_contractile_ring_assembly","termid":"PBO:0031492"}


id: PBO:0071006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 8","termid":"PBO:0071006"}


id: PR:Q9USP0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC11E10.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USP0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF-2B subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.07c","synonyms":[{"name":"Spom972h-SPCC11E10.07c","type":"exact"},{"name":"eIF-2B GDP-GTP exchange factor subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USP0"}


id: PBO:0047431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 2","termid":"PBO:0047431"}


id: SO:0001371
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_carboxymethylaminomethyl_2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_carboxymethylaminomethyl_two_thiouridine","secondary_identifiers":["RNAMOD:079"],"synonyms":[{"name":"5-carboxymethylaminomethyl-2-thiouridine","type":"exact"},{"name":"cmnm5s2U","type":"exact"},{"name":"five carboxymethylaminomethyl two thiouridine","type":"exact"}],"termid":"SO:0001371"}


id: PBO:0065293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRRX2 antisense RNA 1","termid":"PBO:0065293"}


id: GO:0005035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an extracellular messenger (called a death ligand), and transmitting the signal from one side of the plasma membrane to the other to initiate apoptotic or necrotic cell death.","definition_xrefs":["GOC:ecd","GOC:rl","GOC:mtg_apoptosis","GOC:bf","GOC:BHF","PMID:10209153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"death receptor activity","synonyms":[{"name":"apoptosis-activating receptor activity","type":"related"}],"termid":"GO:0005035"}


id: PBO:0003624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP-dependent RNA helicase Mss116 (predicted)","termid":"PBO:0003624"}


id: PBO:0029387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_at_Thr-Pro_site_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029387"}


id: PBO:0054486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1886","termid":"PBO:0054486"}


id: PBO:0030668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_35S_rRNA_precursor_level","termid":"PBO:0030668"}


id: GO:0052196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont defense response (obsolete GO:0052196)","synonyms":[{"name":"down regulation by host of symbiont defense response","type":"exact"},{"name":"down-regulation by host of symbiont defense response","type":"exact"},{"name":"downregulation by host of symbiont defense response","type":"exact"},{"name":"inhibition by host of symbiont defense response","type":"narrow"}],"termid":"GO:0052196"}


id: MONDO:0019945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Solar urticaria (SU) is a rare and difficult to treat photosensitive disease, in which local skin swelling occurs within minutes of exposure to natural sunlight or even artificial light sources emitting ultraviolet radiation.","definition_xrefs":["Orphanet:97230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"solar urticaria","secondary_identifiers":["ICD10CM:L56.3","icd11.foundation:64163683","SCTID:10347006","GARD:19353","UMLS:C0263610","ICD9:708.8","MEDGEN:538004","MedDRA:10041307"],"termid":"MONDO:0019945","xrefs":{"Monarch":{"xref_id":"0019945"}}}


id: PBO:0055298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2725","termid":"PBO:0055298"}


id: GO:0034888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: endosulfan + O2 + 2 H+ + 2 e- = endosulfan sulfate + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endosulfan monooxygenase I activity (obsolete GO:0034888)","termid":"GO:0034888"}


id: PBO:0086507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein kinase, potentially phosphorylated by Cdc28p; interacts with ribosome biogenesis factors, Cka2, Gus1 and Arc1; protein abundance increases in response to DNA replication stress","termid":"PBO:0086507"}


id: MONDO:0005444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete leishmaniasis (obsolete MONDO:0005444)","termid":"MONDO:0005444","xrefs":{"Monarch":{"xref_id":"0005444"}}}


id: MONDO:0008980
data:
  {"annotated_genes":["SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87196],"is_not":false,"summary":null,"term":"MONDO:0008980"}]},"cv_name":"mondo","definition":"Ataxia-hypogonadism-choroidal dystrophy syndrome is a very rare autosomal recessive, slowly progressive neurodegenerative disorder characterized by the triad of cerebellar ataxia (that generally manifests at adolescence or early adulthood), chorioretinal dystrophy, which may have a later onset (up to the fifth-sixth decade) leading to variable degrees of visual impairment, and hypogonadotropic hypogonadism (delayed puberty and lack of secondary sex characteristics). Ataxia-hypogonadism-choroidal dystrophy syndrome belongs to a clinical continuum of neurodegenerative disorders along with the clinically overlapping cerebellar ataxia-hypogonadism syndrome.","definition_xrefs":["Orphanet:1180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04110":null},"genotype_count":0,"is_obsolete":false,"name":"ataxia-hypogonadism-choroidal dystrophy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:347798","DOID:0111265","UMLS:C1859093","MESH:C565850","SCTID:715984007","GARD:944","OMIM:215470"],"synonyms":[{"name":"BNHS","type":"exact"},{"name":"Boucher-Neuhauser syndrome","type":"exact"},{"name":"Boucher-Neuhchäuser syndrome","type":"exact"},{"name":"Boucher-Neuhäuser syndrome","type":"exact"},{"name":"ataxia - hypogonadism - choroidal dystrophy","type":"related"},{"name":"chorioretinal dystrophy, spinocerebellar ataxia and hypogonadotropic hypogonadism","type":"exact"},{"name":"spinocerebellar ataxia, hypogonadotropic hypogonadism, and chorioretinal dystrophy","type":"exact"}],"termid":"MONDO:0008980","terms_by_termid":{"MONDO:0008980":null},"xrefs":{"Monarch":{"xref_id":"0008980"}}}


id: PBO:0053428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 373","termid":"PBO:0053428"}


id: PBO:0084813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; null mutant has a respiratory growth defect and displays reduced peroxide-induced mitochondrial ROS; partially overlaps the verified gene MRPL51/YPR100W","termid":"PBO:0084813"}


id: PBO:0116623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 1 pseudogene 2","termid":"PBO:0116623"}


id: PR:P79060
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein translation factor sui1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.05","secondary_identifiers":["UniProtKB:P79060"],"synonyms":[{"name":"Spom972h-EIF1","type":"exact"}],"termid":"PR:P79060"}


id: PBO:0091272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4210 domain protein, human FAM214A ortholog, implicated in chromosome segregation","termid":"PBO:0091272"}


id: GO:0052874
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FMNH2 + NAD+ = FMN + NADH + 2 H+.","definition_xrefs":["RHEA:21620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"FMN reductase (NADH) activity","secondary_identifiers":["EC:1.5.1.42","KEGG_REACTION:R05705"],"synonyms":[{"name":"NADH dehydrogenase (FMN) activity","type":"exact"},{"name":"NADH-FMN reductase activity","type":"related"},{"name":"NADH-dependent FMN reductase activity","type":"related"}],"termid":"GO:0052874"}


id: PBO:0056569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephalin 1","termid":"PBO:0056569"}


id: FYPO:0005404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which chromosomes remain linear, but lose telomeric repeats. Subtelomeric DNA may also be lost.","definition_xrefs":["PMID:12930956","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"output_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000002","FYPO:0000707","FYPO:0000641","FYPO:0001320","FYPO:0005447","FYPO:0000661"],"is_obsolete":false,"name":"telomeric regions absent from linear chromosomes","synonyms":[{"name":"telomeric regions absent from linear chromosomes during mitotic cell cycle","type":"related"},{"name":"telomeric regions absent from linear chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0005404"}


id: GO:0045979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleosides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleoside metabolic process","termid":"GO:0009118"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"nucleoside metabolic process","termid":"GO:0009116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of nucleoside metabolic process","synonyms":[{"name":"activation of nucleoside metabolic process","type":"narrow"},{"name":"positive regulation of nucleoside metabolism","type":"exact"},{"name":"stimulation of nucleoside metabolic process","type":"narrow"},{"name":"up regulation of nucleoside metabolic process","type":"exact"},{"name":"up-regulation of nucleoside metabolic process","type":"exact"},{"name":"upregulation of nucleoside metabolic process","type":"exact"}],"termid":"GO:0045979"}


id: PBO:0075725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRM pseudogene 1","termid":"PBO:0075725"}


id: PBO:0060940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFE2 like bZIP transcription factor 3","termid":"PBO:0060940"}


id: MOD:00058
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine to N-acetyl-L-methionine.","definition_xrefs":["PubMed:7944406","RESID:AA0049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-methionine","synonyms":[{"name":"(2S)-2-acetamido-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-acetylamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-acetylamino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-acetylazanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"AcMet","type":"exact"},{"name":"MOD_RES N-acetylmethionine","type":"exact"},{"name":"N-acetyl-L-methionine","type":"exact"},{"name":"N-acetylated L-methionine","type":"exact"},{"name":"acetylmethionine","type":"exact"},{"name":"methionamine","type":"exact"}],"termid":"MOD:00058"}


id: PR:Q9HDT7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP20C8.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDT7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0321 protein P20C8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP20C8.02c","synonyms":[{"name":"Spom972h-SPCP20C8.02c","type":"exact"}],"termid":"PR:Q9HDT7"}


id: GO:0046665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of the amnioserosa, an epithelium that occupies a hole in the embryonic dorsal epidermis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amnioserosa maintenance","termid":"GO:0046665"}


id: PBO:0046895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM20B glycosaminoglycan xylosylkinase","termid":"PBO:0046895"}


id: PBO:0109131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIPTO pseudogene 4","termid":"PBO:0109131"}


id: GO:0070147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling cysteine to cysteinyl-tRNA in a mitochondrion, catalyzed by cysteinyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteinyl-tRNA aminoacylation","termid":"GO:0006423"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0006399","GO:0140053","GO:0008150","GO:0006520","GO:0010467"],"is_obsolete":false,"name":"mitochondrial cysteinyl-tRNA aminoacylation","termid":"GO:0070147"}


id: PR:Q9P784
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl401 gene.","definition_xrefs":["UniProtKB:Q9P784","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L4-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.06","synonyms":[{"name":"Spom972h-rpl401","type":"exact"}],"termid":"PR:Q9P784"}


id: MONDO:0008051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tubular aggregate myopathy is a disorder that affects the skeletal muscles. Signs and symptoms typically begin in childhood and worsen over time. The leg muscles are most often affected, but the arm muscles may also be involved. Symptoms include muscle pain, cramping, weakness or stiffness; and exercise-induced muscle fatigue. Affected individuals may have an unusual walking style (gait) or difficulty running, climbing stairs, or getting up from a squatting position. Some individuals develop contractures. This condition may be caused by mutations in the STIM1 or ORAI1 genes. It is usually inherited in an autosomal dominant manner, but autosomal recessive inheritance has also been reported.","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"tubular aggregate myopathy","secondary_identifiers":["MEDGEN:98050","OMIMPS:160565","Orphanet:2593","GARD:3884","UMLS:C0410207","DOID:0080089"],"synonyms":[{"name":"TAM1","type":"related"},{"name":"myopathy, tubular aggregate, 1","type":"related"},{"name":"myopathy, tubular aggregate, type 1","type":"exact"},{"name":"tubular aggregate myopathy","type":"exact"}],"termid":"MONDO:0008051","xrefs":{"Monarch":{"xref_id":"0008051"}}}


id: GO:0048385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retinoic acid receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of retinoic acid receptor signaling pathway","synonyms":[{"name":"regulation of RAR signaling pathway","type":"exact"},{"name":"regulation of retinoic acid receptor signalling pathway","type":"exact"}],"termid":"GO:0048385"}


id: GO:0007130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the synaptonemal complex is formed. This is a structure that holds paired chromosomes together during prophase I of meiosis and that promotes genetic recombination.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"is_a","term_name":"synaptonemal complex organization","termid":"GO:0070193"},{"relation_name":"part_of","term_name":"homologous chromosome pairing at meiosis","termid":"GO:0007129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"synaptonemal complex assembly","synonyms":[{"name":"synaptonemal complex formation","type":"exact"}],"termid":"GO:0007130"}


id: GO:0033376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a location within a secretory granule in a T cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"part_of","term_name":"protein localization to T cell secretory granule","termid":"GO:0033374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"establishment of protein localization to T cell secretory granule","synonyms":[{"name":"establishment of protein localisation in T cell secretory granule","type":"exact"},{"name":"establishment of protein localization in T cell secretory granule","type":"exact"},{"name":"establishment of protein localization in T lymphocyte secretory granule","type":"exact"},{"name":"establishment of protein localization in T-cell secretory granule","type":"exact"},{"name":"establishment of protein localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033376"}


id: GO:1905520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of presynaptic active zone assembly.","definition_xrefs":["GOC:rl","GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:15797875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of presynaptic active zone assembly","termid":"GO:1905518"},{"relation_name":"is_a","term_name":"positive regulation of presynapse assembly","termid":"GO:1905608"},{"relation_name":"positively_regulates","term_name":"presynaptic active zone assembly","termid":"GO:1904071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of presynaptic active zone assembly","synonyms":[{"name":"activation of pre-synaptic active zone assembly","type":"narrow"},{"name":"activation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"activation of pre-synaptic active zone component formation","type":"narrow"},{"name":"activation of pre-synaptic active zone formation","type":"narrow"},{"name":"activation of presynaptic active zone assembly","type":"narrow"},{"name":"activation of presynaptic active zone formation","type":"narrow"},{"name":"positive regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"positive regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"positive regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"positive regulation of pre-synaptic active zone formation","type":"exact"},{"name":"positive regulation of presynaptic active zone formation","type":"exact"},{"name":"up regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"up regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"up regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"up regulation of pre-synaptic active zone formation","type":"exact"},{"name":"up regulation of presynaptic active zone assembly","type":"exact"},{"name":"up regulation of presynaptic active zone formation","type":"exact"},{"name":"up-regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"up-regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"up-regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"up-regulation of pre-synaptic active zone formation","type":"exact"},{"name":"up-regulation of presynaptic active zone assembly","type":"exact"},{"name":"up-regulation of presynaptic active zone formation","type":"exact"},{"name":"upregulation of pre-synaptic active zone assembly","type":"exact"},{"name":"upregulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"upregulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"upregulation of pre-synaptic active zone formation","type":"exact"},{"name":"upregulation of presynaptic active zone assembly","type":"exact"},{"name":"upregulation of presynaptic active zone formation","type":"exact"}],"termid":"GO:1905520"}


id: PBO:0027316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_mitotic_spindle","termid":"PBO:0027316"}


id: PBO:0042258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 4","termid":"PBO:0042258"}


id: PBO:0085258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral mitochondrial inner membrane protein; may facilitate use of unformylated tRNA-Met in mitochondrial translation initiation; stabilizes the bicistronic AAP1-ATP6 mRNA","termid":"PBO:0085258"}


id: GO:0044194
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized secretory lysosome that is present in cells with cytolytic capability such as cytotoxic T lymphocytes and natural killer cells. Cytolytic granules mediate the storage and regulated excretion of lytic molecules for killing of target cells.","definition_xrefs":["PMID:12766758","GOC:jl","PMID:11052265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"cytolytic granule","termid":"GO:0044194"}


id: MONDO:0012746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dilated cardiomyopathy that has material basis in mutation in the TNNI3 gene on chromosome 19q13.","definition_xrefs":["DOID:0110460","PMID:15070570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 2A","secondary_identifiers":["UMLS:C2678474","GARD:15532","MEDGEN:437214","OMIM:611880"],"synonyms":[{"name":"CMD2A","type":"exact"},{"name":"cardiomyopathy, congestive, autosomal recessive","type":"related"},{"name":"cardiomyopathy, dilated, 2A","type":"related"},{"name":"cardiomyopathy, dilated, autosomal recessive","type":"related"},{"name":"cardiomyopathy, dilated, type 2A","type":"exact"},{"name":"dilated cardiomyopathy type 2A","type":"exact"}],"termid":"MONDO:0012746","xrefs":{"Monarch":{"xref_id":"0012746"}}}


id: PBO:0111773
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DNL","termid":"PBO:0111773"}


id: PBO:0089085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase,  human DHRS7 family","termid":"PBO:0089085"}


id: PBO:0061898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 4","termid":"PBO:0061898"}


id: PBO:0076792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin epsilon and delta complex 2","termid":"PBO:0076792"}


id: GO:0046052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UTP, uridine (5'-)triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate catabolic process","termid":"GO:0009210"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"UTP metabolic process","termid":"GO:0046051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UTP catabolic process","synonyms":[{"name":"UTP breakdown","type":"exact"},{"name":"UTP catabolism","type":"exact"},{"name":"UTP degradation","type":"exact"},{"name":"UTP hydrolysis","type":"exact"}],"termid":"GO:0046052"}


id: PBO:0053736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 958","termid":"PBO:0053736"}


id: GO:2001146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (obsolete GO:2001146)","termid":"GO:2001146"}


id: MONDO:0001474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of salpingo-oophoritis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salpingo-oophoritis","termid":"MONDO:0001172"},{"relation_name":"is_a","term_name":"chronic salpingitis","termid":"MONDO:0003617"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic salpingo-oophoritis","secondary_identifiers":["SCTID:198142001","DOID:12265","MEDGEN:510244","UMLS:C0156328","ICD9:614.1"],"synonyms":[{"name":"chronic salpingitis and oophoritis","type":"exact"},{"name":"chronic salpingitis/oophoritis","type":"exact"},{"name":"chronic salpingo-oophoritis","type":"exact"},{"name":"salpingo-oophoritis, chronic","type":"exact"}],"termid":"MONDO:0001474","xrefs":{"Monarch":{"xref_id":"0001474"}}}


id: PBO:0059354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S16 pseudogene 2","termid":"PBO:0059354"}


id: PBO:0113452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of EGO/GSE complex; vacuolar/endosomal membrane-associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from endosome to plasma membrane; targeted to vacuole via AP-3 pathway; loss results in defect in vacuolar acidification","termid":"PBO:0113452"}


id: PBO:0067580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 737, pseudogene","termid":"PBO:0067580"}


id: GO:0160222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-alanine + D-serine = ADP + D-alanyl-D-serine + H+ + phosphate.","definition_xrefs":["RHEA:27706","EC:6.3.2.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-alanine-D-serine ligase activity","secondary_identifiers":["KEGG_REACTION:R09595","MetaCyc:RXN-11299"],"termid":"GO:0160222"}


id: PBO:0001788
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predominantly uniformly single copy (one ot one)","termid":"PBO:0001788"}


id: PBO:0004203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex subunit Rec14","termid":"PBO:0004203"}


id: GO:0043261
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha2, beta1 and gamma3 polypeptide chains.","definition_xrefs":["GOC:jl","PMID:10842354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-12 complex","synonyms":[{"name":"laminin-213 complex","type":"exact"}],"termid":"GO:0043261"}


id: PBO:0067271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 346, pseudogene","termid":"PBO:0067271"}


id: FYPO:0007924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of potassium chloride and sodium dodecyl sulfate. Cells stop growing (and may die) at concentrations of potassium chloride and sodium dodecyl sulfate that allow wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to potassium chloride and sodium dodecyl sulfate","termid":"FYPO:0007924"}


id: PBO:0030615
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cell_wall-degrading_enzymes","termid":"PBO:0030615"}


id: MOD:00254
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and the 5'-end of RNA through a phosphodiester to form O4'-(phospho-5'-RNA)-L-tyrosine.","definition_xrefs":["PubMed:217003","PubMed:209034","PubMed:6264310","PubMed:1702164","RESID:AA0249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleic acid linked residue","termid":"MOD:00751"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-RNA)-L-tyrosine","synonyms":[{"name":"(S)-2-amino-3-[4-(5'-ribonucleic acid phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"MOD_RES O-(5'-phospho-RNA)-tyrosine","type":"exact"},{"name":"O4'-(phospho-5'-RNA)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-RNA phosphodiester","type":"exact"}],"termid":"MOD:00254"}


id: PBO:0060561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin pseudogene 5","termid":"PBO:0060561"}


id: PR:P0CT40
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-9 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.02c","synonyms":[{"name":"Spom972h-Tf2-9","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT40"}


id: PBO:0053559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 567","termid":"PBO:0053559"}


id: GO:0106415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"GlcNAc-MurNAc-L-alanyl-gamma-D-glutamyl-meso-diaminopimelyl-D-alanine + H2O = GlcNAc-MurNAc-L-alanyl-gamma-D-glutamyl-meso-diaminopimelate + D-alanine.","definition_xrefs":["PMID:15361936","PMID:10428950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxypeptidase activity","termid":"GO:0004180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0008233","GO:0003674","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"muramoyltetrapeptide carboxypeptidase activity","secondary_identifiers":["RHEA:48688","EC:3.4.17.13"],"termid":"GO:0106415"}


id: GO:0042075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of nickel into a nickel-iron-sulfur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide, found in carbon monoxide dehydrogenase.","definition_xrefs":["RESID:AA0310"],"gene_count":0,"genotype_count":0,"name":"obsolete nickel incorporation into nickel-iron-sulfur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulfide (obsolete GO:0042075)","synonyms":[{"name":"nickel incorporation into nickel-iron-sulphur cluster via pentakis-L-cysteinyl L-histidino nickel tetrairon pentasulphide","type":"exact"}],"termid":"GO:0042075"}


id: GO:2000555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 1 cell cytokine production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell cytokine production","termid":"GO:0002725"},{"relation_name":"is_a","term_name":"negative regulation of T-helper 1 type immune response","termid":"GO:0002826"},{"relation_name":"is_a","term_name":"regulation of T-helper 1 cell cytokine production","termid":"GO:2000554"},{"relation_name":"negatively_regulates","term_name":"T-helper 1 cell cytokine production","termid":"GO:0035744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of T-helper 1 cell cytokine production","synonyms":[{"name":"negative regulation of Th1 cell cytokine production","type":"exact"}],"termid":"GO:2000555"}


id: PBO:0052792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 33A","termid":"PBO:0052792"}


id: GO:1900906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hexadecanal metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of hexadecanal metabolic process","termid":"GO:1900905"},{"relation_name":"negatively_regulates","term_name":"hexadecanal metabolic process","termid":"GO:0046458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hexadecanal metabolic process","synonyms":[{"name":"down regulation of hexadecanal metabolic process","type":"exact"},{"name":"down regulation of hexadecanal metabolism","type":"related"},{"name":"down-regulation of hexadecanal metabolic process","type":"exact"},{"name":"down-regulation of hexadecanal metabolism","type":"related"},{"name":"downregulation of hexadecanal metabolic process","type":"exact"},{"name":"downregulation of hexadecanal metabolism","type":"related"},{"name":"inhibition of hexadecanal metabolic process","type":"narrow"},{"name":"inhibition of hexadecanal metabolism","type":"related"},{"name":"negative regulation of hexadecanal metabolism","type":"related"}],"termid":"GO:1900906"}


id: PBO:0070974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 12","termid":"PBO:0070974"}


id: RO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"transports","termid":"RO:0002020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exports","termid":"RO:0002345"}


id: PBO:0034798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin N-acetyltransferase/DNA polymerase eta Eso1 fusion protein","termid":"PBO:0034798"}


id: PBO:0074355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes 3","termid":"PBO:0074355"}


id: GO:0050051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leukotriene B4 + O2 + reduced [NADPH-hemoprotein reductase] = 20-hydroxy-leukotriene B4 + H+ + H2O + oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["PMID:11461919","PMID:8486631","RHEA:22176","PMID:15364545","PMID:9675028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"leukotriene-B4 20-monooxygenase activity","secondary_identifiers":["MetaCyc:LEUKOTRIENE-B4-20-MONOOXYGENASE-RXN","Reactome:R-HSA-211873","EC:1.14.14.94"],"synonyms":[{"name":"LTB(4) 20-hydroxylase activity","type":"related"},{"name":"LTB(4) omega-hydroxylase activity","type":"related"},{"name":"LTB4 20-hydroxylase activity","type":"related"},{"name":"LTB4 omega-hydroxylase activity","type":"related"},{"name":"leukotriene-B4 20-hydroxylase activity","type":"related"},{"name":"leukotriene-B4 omega-hydroxylase activity","type":"related"}],"termid":"GO:0050051"}


id: MONDO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare type of pneumoconiosis caused by long standing exposure to barium dust. It is characterized by the formation of fine dense lesions in the lung parenchyma. The lesions do not affect the lung function and disappear without treatment after the exposure to barium dust stops.","definition_xrefs":["NCIT:C34410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baritosis","secondary_identifiers":["GARD:8371","MESH:C537080","SCTID:50076003","ICD9:503","UMLS:C0340177","DOID:10321","MEDGEN:87399"],"synonyms":[{"name":"deposition of barium in the lungs","type":"related"},{"name":"inhalation of barytes","type":"related"}],"termid":"MONDO:0001001","xrefs":{"Monarch":{"xref_id":"0001001"}}}


id: PBO:0044602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 8 like 1","termid":"PBO:0044602"}


id: PBO:0038588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA carboxylase beta","termid":"PBO:0038588"}


id: PBO:0048634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 3","termid":"PBO:0048634"}


id: MONDO:0003850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow-growing malignant bone tumor arising from the remnants of the notochord and occurring in the clivus. It is characterized by a lobulated growth pattern, myxoid stroma formation, the presence of physaliphorous cells and cartilage.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clivus chordoma","termid":"MONDO:0003849"},{"relation_name":"is_a","term_name":"chondroid chordoma","termid":"MONDO:0006145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"clivus chondroid chordoma","secondary_identifiers":["UMLS:C1333072","DOID:6313","MEDGEN:232373","NCIT:C5426"],"synonyms":[{"name":"chondroid chordoma of clivus","type":"exact"},{"name":"chondroid chordoma of clivus of occipital bone","type":"exact"},{"name":"chondroid chordoma of the clivus","type":"exact"},{"name":"clivus of occipital bone chondroid chordoma","type":"exact"}],"termid":"MONDO:0003850","xrefs":{"Monarch":{"xref_id":"0003850"}}}


id: PBO:0090591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial LYR family protein Lyr2","termid":"PBO:0090591"}


id: PBO:0091359
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dpb4-interacting, RRM and IDR-containing factor","termid":"PBO:0091359"}


id: FYPO:0001318
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which the cellular response to a chemical stimulus is normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus","termid":"FYPO:0000953"},{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000298","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular response to chemical stimulus during vegetative growth","synonyms":[{"name":"normal cellular response to chemical stimulus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001318"}


id: PBO:0050360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 63","termid":"PBO:0050360"}


id: PR:O59792
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cif1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin-independence factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC364.01","synonyms":[{"name":"Spom972h-cif1","type":"exact"}],"termid":"PR:O59792"}


id: PBO:0080456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VSTM2A overlapping transcript 1","termid":"PBO:0080456"}


id: MONDO:0016707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Astroblastoma is a very rare glial neoplasm of the central nervous system, most often with an intra-axial peripheral supratentorial location in one hemisphere of the frontal or parietal lobes and usually presenting in infants and young adults with symptoms of vomiting, loss of consciousness, epileptic seizures and headaches.","definition_xrefs":["Orphanet:251679"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"astrocytoma (excluding glioblastoma)","termid":"MONDO:0019781"},{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astroblastoma","secondary_identifiers":["icd11.foundation:2011571705","MEDGEN:90811","NCIT:C4324","ONCOTREE:ASTB","UMLS:C0334587","GARD:10635","ICDO:9430/3","DOID:7305","icd11.foundation:96344074"],"synonyms":[{"name":"AstB","type":"related"},{"name":"astroblastoma","type":"exact"},{"name":"astroblastoma (morphologic abnormality)","type":"exact"},{"name":"cerebral astroblastoma","type":"related"}],"termid":"MONDO:0016707","xrefs":{"Monarch":{"xref_id":"0016707"}}}


id: GO:0050692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein's DNA binding domain (DBD).","definition_xrefs":["PMID:9682036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"DNA binding domain binding","synonyms":[{"name":"DBD binding","type":"exact"}],"termid":"GO:0050692"}


id: MONDO:0100251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"},{"relation_name":"is_a","term_name":"familial tumoral calcinosis","termid":"MONDO:0018891"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"familial hyperphosphatemic tumoral calcinosis/hyperphosphatemic hyperostosis syndrome","secondary_identifiers":["MEDGEN:360297","GARD:10879","DOID:0111063","Orphanet:306661","NCIT:C131851","UMLS:C1876187"],"synonyms":[{"name":"HFTC","type":"exact"},{"name":"HHS","type":"broad"},{"name":"PHPTC","type":"exact"},{"name":"cortical hyperostosis with hyperphosphatemia","type":"exact"},{"name":"familial Teutschlaender disease","type":"exact"},{"name":"familial hyperphosphatemic tumoral calcinosis/hyperphosphatemic hyperostosis syndrome","type":"exact"},{"name":"hypercalcemic tumoral calcinosis","type":"exact"},{"name":"hyperostosis with hyperphosphatemia","type":"exact"},{"name":"hyperphosphatemia hyperostosis","type":"exact"},{"name":"hyperphosphatemia hyperostosis syndrome","type":"exact"},{"name":"hyperphosphatemia tumoral calcinosis","type":"exact"},{"name":"hyperphosphatemic familial tumoral calcinosis","type":"exact"},{"name":"lipocalcinogranulomatosis","type":"exact"},{"name":"morbus Teutschlaender","type":"exact"},{"name":"primary hyperphosphatemic tumoral calcinosis","type":"exact"},{"name":"tumoral calcinosis with hyperphosphatemia","type":"exact"},{"name":"tumoral calcinosis, hyperphosphatemic, familial, 1","type":"related"}],"termid":"MONDO:0100251","xrefs":{"Monarch":{"xref_id":"0100251"}}}


id: GO:0062080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class Ib protein complex to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["DOI:10.1002/9780470015902.a0024246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class Ib receptor activity","termid":"GO:0032394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"inhibitory MHC class Ib receptor activity","termid":"GO:0062080"}


id: GO:0008630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced by the detection of DNA damage, and ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA damage response","termid":"GO:0006974"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to DNA damage","synonyms":[{"name":"DNA damage response, signal transduction resulting in induction of apoptosis","type":"related"}],"termid":"GO:0008630"}


id: PBO:0078628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 77B, pseudogene","termid":"PBO:0078628"}


id: MONDO:0012235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia autosomal recessive 7, also called SCAR7, is a slowly progressive hereditary form of spinocerebellar ataxia. Symptoms of SCAR7 can include difficulty walking and writing, speech difficulties (dysarthria), limb ataxia, and a decrease in the size of a region of the brain called the cerebellum (cerebellar atrophy). Of the few reported cases in the literature, some patients also had eye involvement that included nystagmus (in voluntary eye movements)and saccadic pursuit eye movements. Out of 5 affected siblings examined in a large Dutch family, 2 became wheelchair-dependent late in life. The severity of the symptoms varies from mild to severe. SCAR7 is caused by mutations in the TPP1 gene and is inherited in an autosomal recessive manner.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive spinocerebellar ataxia 7","secondary_identifiers":["GARD:12232","MESH:C563753","Orphanet:284324","UMLS:C1836474","MEDGEN:324520","OMIM:609270","DOID:0080059"],"synonyms":[{"name":"SCAR7","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia type 7","type":"exact"},{"name":"childhood onset autosomal recessive slowly progressive spinocerebellar ataxia","type":"related"},{"name":"childhood-onset autosomal recessive slowly progressive spinocerebellar ataxia","type":"related"},{"name":"spinocerebellar ataxia autosomal recessive 7","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive 7","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive type 7","type":"exact"}],"termid":"MONDO:0012235","xrefs":{"Monarch":{"xref_id":"0012235"}}}


id: GO:0002361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD4-positive, CD25-positive, alpha-beta regulatory T cell.","definition_xrefs":["GOC:add","PMID:15207821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043367"},{"relation_name":"is_a","term_name":"regulatory T cell differentiation","termid":"GO:0045066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","synonyms":[{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell development","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation","type":"exact"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation","type":"exact"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002361"}


id: MOD:01361
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-thiophospho-L-threonine.","definition_xrefs":["PubMed:11507762","Unimod:260#T","PubMed:12110917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiophosphorylated residue","termid":"MOD:00583"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-thiophospho-L-threonine","synonyms":[{"name":"Thiophospho","type":"related"},{"name":"Thiophosphorylation","type":"related"}],"termid":"MOD:01361"}


id: GO:0097663
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Dia2 in S. cerevisiae (Pof3 in S. pombe).","definition_xrefs":["GOC:vw","PMID:14747994","PMID:15147268","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SCF-Dia2/Pof3 ubiquitin ligase complex","termid":"GO:0097663"}


id: PBO:0042741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein P","termid":"PBO:0042741"}


id: PBO:0091406
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CDC5L","termid":"PBO:0091406"}


id: MONDO:0016805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete isolated oxidative phosphorylation complex disorder (obsolete MONDO:0016805)","secondary_identifiers":["Orphanet:254846"],"synonyms":[{"name":"isolated respiratory chain complex disorder","type":"exact"}],"termid":"MONDO:0016805","xrefs":{"Monarch":{"xref_id":"0016805"}}}


id: PATO:0001848
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved asymmetrically.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asymmetrically curved","termid":"PATO:0001848"}


id: GO:0044138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont regulates its progression from an initial condition to a later condition, on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of development of symbiont on or near host (obsolete GO:0044138)","termid":"GO:0044138"}


id: PATO:0000735
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000735 limb tone value (obsolete PATO:0000735)","termid":"PATO:0000735"}


id: PBO:0084613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged ORF; YER108C has been merged into YER109C because it has been demonstrated that they correspond to a mutated FLO8 gene with an A to G transition at position 431 in strain S288C, changing amino acid 144 from a Trp to a stop","termid":"PBO:0084613"}


id: PBO:0064201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLAC8 like 1","termid":"PBO:0064201"}


id: PR:Q9USH7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psy1 gene.","definition_xrefs":["UniProtKB:Q9USH7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin-like protein psy1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.03c","synonyms":[{"name":"Spom972h-psy1","type":"exact"}],"termid":"PR:Q9USH7"}


id: PBO:0049669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 1","termid":"PBO:0049669"}


id: GO:0046317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosylceramide.","definition_xrefs":["GOC:ai","GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ceramide biosynthetic process","termid":"GO:2000303"},{"relation_name":"regulates","term_name":"glucosylceramide biosynthetic process","termid":"GO:0006679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0006629"],"is_obsolete":false,"name":"regulation of glucosylceramide biosynthetic process","synonyms":[{"name":"regulation of glucosylceramide anabolism","type":"exact"},{"name":"regulation of glucosylceramide biosynthesis","type":"exact"},{"name":"regulation of glucosylceramide formation","type":"exact"},{"name":"regulation of glucosylceramide synthesis","type":"exact"}],"termid":"GO:0046317"}


id: MONDO:0003049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the ovary and is characterized by the presence of large malignant cells exhibiting neuroendocrine differentiation. The prognosis is poor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian neuroendocrine neoplasm","termid":"MONDO:0002481"},{"relation_name":"is_a","term_name":"large cell neuroendocrine carcinoma","termid":"MONDO:0005057"},{"relation_name":"is_a","term_name":"ovarian carcinoma","termid":"MONDO:0005140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian large-cell neuroendocrine carcinoma","secondary_identifiers":["MEDGEN:233809","NCIT:C5238","DOID:4555","UMLS:C1335174"],"synonyms":[{"name":"large cell neuroendocrine carcinoma of ovary","type":"exact"},{"name":"large cell neuroendocrine carcinoma of the ovary","type":"exact"},{"name":"large-cell neuroendocrine carcinoma of ovary","type":"exact"},{"name":"large-cell neuroendocrine carcinoma of the ovary","type":"exact"},{"name":"non-small-cell type neuroendocrine carcinoma of ovary","type":"exact"},{"name":"non-small-cell type neuroendocrine carcinoma of the ovary","type":"exact"},{"name":"ovarian large cell NEC","type":"exact"},{"name":"ovarian large cell neuroendocrine carcinoma","type":"exact"},{"name":"ovarian non-small-cell type neuroendocrine carcinoma","type":"exact"},{"name":"ovary large cell neuroendocrine carcinoma","type":"exact"}],"termid":"MONDO:0003049","xrefs":{"Monarch":{"xref_id":"0003049"}}}


id: GO:2001174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H2B conserved C-terminal lysine ubiquitination.","definition_xrefs":["PMID:17576814"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H2B conserved C-terminal lysine ubiquitination (obsolete GO:2001174)","synonyms":[{"name":"negative regulation of budding yeast H2B K123 ubiquitination","type":"related"},{"name":"negative regulation of fission yeast H2B K119 ubiquitination","type":"related"},{"name":"negative regulation of mammalian H2B K120 ubiquitination","type":"related"}],"termid":"GO:2001174"}


id: PBO:0031421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_morphology","termid":"PBO:0031421"}


id: PBO:0057463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 582","termid":"PBO:0057463"}


id: FYPO:0007333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing does not occur. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin or CENP-A-containing chromatin (the latter is found at the centromere central core).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished gene silencing","termid":"FYPO:0000575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"abolished chromatin silencing","synonyms":[{"name":"abolished chromatin silencing during mitotic cell cycle","type":"related"},{"name":"chromatin silencing abolished","type":"exact"},{"name":"chromatin silencing abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0007333"}


id: PBO:0004313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg9","termid":"PBO:0004313"}


id: GO:0019449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including hypotaurine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process","termid":"GO:0019448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"L-cysteine catabolic process to hypotaurine","synonyms":[{"name":"L-cysteine breakdown to hypotaurine","type":"exact"},{"name":"L-cysteine degradation to hypotaurine","type":"exact"}],"termid":"GO:0019449"}


id: SO:1000040
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tandem duplication where the individual regions are not in the same orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tandem_duplication","termid":"SO:1000173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted_tandem_duplication","synonyms":[{"name":"inverted tandem duplication","type":"exact"},{"name":"mirror duplication","type":"related"}],"termid":"SO:1000040"}


id: PBO:0071506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 9","termid":"PBO:0071506"}


id: MONDO:0100471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormally low level of 25-hydroxyvitamin D in the blood.","definition_xrefs":["NCIT:C114830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin deficiency disorder","termid":"MONDO:0024298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin D deficiency","secondary_identifiers":["ICD10CM:E55","ICD9:268","DOID:10574","MEDGEN:12114","HP:0100512","SCTID:34713006","icd11.foundation:2080031371","MESH:D014808","UMLS:C0042870"],"synonyms":[{"name":"DEFIC VITAMIN D","type":"exact"},{"name":"VITAMIN D DEFIC","type":"exact"},{"name":"avitaminosis D","type":"exact"},{"name":"avitaminosis D, NOS","type":"exact"},{"name":"deficiencies, vitamin D","type":"exact"},{"name":"deficiency of vitamin D (disorder)","type":"exact"},{"name":"deficiency, vitamin D","type":"exact"},{"name":"vitamin D deficiencies","type":"exact"},{"name":"vitamin D deficiency (disorder)","type":"exact"},{"name":"vitamin D deficiency, NOS","type":"exact"},{"name":"vitamin D insufficiency","type":"exact"}],"termid":"MONDO:0100471","xrefs":{"Monarch":{"xref_id":"0100471"}}}


id: PBO:0031480
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_actin_cortical_patch","termid":"PBO:0031480"}


id: PBO:0017887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase kink, Knk1","termid":"PBO:0017887"}


id: GO:0044136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of the symbiont from an initial condition to a later condition, occurring on or near its host rhizosphere. The host rhizosphere is defined as total below-ground surfaces of a plant as a habitat for its symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete development of symbiont on or near host rhizosphere (obsolete GO:0044136)","termid":"GO:0044136"}


id: PBO:0028120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_lateral_cortical_node,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028120"}


id: PBO:0078691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 2-4","termid":"PBO:0078691"}


id: PBO:0057156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302b","termid":"PBO:0057156"}


id: GO:0015867
data:
  {"annotated_genes":["SJAG_02050","SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58935,103198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"}]},"cv_name":"biological_process","definition":"The directed movement of ATP, adenosine triphosphate, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"ATP transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0015867","terms_by_termid":{"GO:1990544":null}}


id: PBO:0071665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a pseudogene 6","termid":"PBO:0071665"}


id: FYPO:0000758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to bismuth ions. Cells stop growing (and may die) at a concentration of bismuth that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to bismuth","synonyms":[{"name":"hypersensitive to bismuth","type":"exact"},{"name":"sensitive to bismuth during mitotic cell cycle","type":"related"},{"name":"sensitive to bismuth during vegetative growth","type":"exact"},{"name":"sensitive to bismuth ions","type":"exact"}],"termid":"FYPO:0000758"}


id: GO:0102340
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxybehenoyl-CoA(4-) + NADP(3-) = 3-oxodocosanoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-behenoyl-CoA reductase activity (obsolete GO:0102340)","termid":"GO:0102340"}


id: PBO:0069980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1275, pseudogene","termid":"PBO:0069980"}


id: SO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recoding by frameshifting a particular site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoded","termid":"SO:0000881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally_frameshifted","synonyms":[{"name":"translationally frameshifted","type":"exact"}],"termid":"SO:0000887"}


id: MONDO:0030931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"proteosome-associated autoinflammatory syndrome","termid":"MONDO:0009726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005046"],"is_obsolete":false,"name":"proteasome-associated autoinflammatory syndrome 4","secondary_identifiers":["GARD:18449","DOID:0060915","MEDGEN:1780127","OMIM:619183","UMLS:C5543053"],"synonyms":[{"name":"PRAAS4","type":"exact"},{"name":"proteasome-associated autoinflammatory syndrome 4","type":"exact"}],"termid":"MONDO:0030931","xrefs":{"Monarch":{"xref_id":"0030931"}}}


id: MONDO:0018363
data:
  {"annotated_genes":["SJAG_03249"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013997"}]},"cv_name":"mondo","definition":"Focal facial dermal dysplasias (FFDD) are rare ectodermal dysplasias, characterized by congenital bitemporal (resembling forceps marks) or preauricular scar-like lesions associated with additional facial and or systematic manifestations. 4 types of FFDD are described (FFDD I to IV). FFDD types II and III present with a variable facial dysmorphism including distichiasis (upper lashes) or lacking eyelashes, and upward slanting and thinned lateral eyebrows with a flattened nasal bridge and full upper lip. FFDD types I and IV are infrequently associated with extra-cutaneous anomalies.","definition_xrefs":["Orphanet:398166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"focal facial dermal dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:136500","UMLS:C2936827","MESH:C537068","GARD:8416","MEDGEN:445408","icd11.foundation:1200544726"],"synonyms":[{"name":"FFDD","type":"exact"}],"termid":"MONDO:0018363","terms_by_termid":{"MONDO:0013997":null},"xrefs":{"Monarch":{"xref_id":"0018363"}}}


id: PBO:0001803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter Amt3","termid":"PBO:0001803"}


id: GO:0086070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates interactions between an SA node cardiomyocyte and its surroundings that contributes to the process of the SA node cardiomyocyte communicating with an atrial cardiomyocyte in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"SA node cell to atrial cardiac muscle cell communication","synonyms":[{"name":"SA node cardiac muscle cell to atrial cardiac muscle cell communication","type":"exact"},{"name":"SA node cardiomyocyte to atrial cardiomyocyte communication","type":"exact"},{"name":"SAN cardiomyocyte to atrial cardiomyocyte communication","type":"exact"},{"name":"sinoatrial node cardiomyocyte to atrial cardiomyocyte communication","type":"exact"},{"name":"sinus node cardiomyocyte to atrial cardiomyocyte communication","type":"narrow"}],"termid":"GO:0086070"}


id: GO:0052813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + a phosphatidylinositol bisphosphate = ADP + a phosphatidylinositol trisphosphate.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol bisphosphate kinase activity (obsolete GO:0052813)","termid":"GO:0052813"}


id: GO:0099082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by a neuropeptide.","definition_xrefs":["GOC:dos","GOC:PARL","PMID:19448629","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling","termid":"GO:0098917"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by neuropeptide","termid":"GO:0099540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by neuropeptide","termid":"GO:0099082"}


id: PR:Q10086
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe4 gene.","definition_xrefs":["UniProtKB:Q10086","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C11D3.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.07c","synonyms":[{"name":"Spom972h-toe4","type":"exact"}],"termid":"PR:Q10086"}


id: PBO:0031309
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation","termid":"PBO:0031309"}


id: PBO:0053986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1303","termid":"PBO:0053986"}


id: GO:0075514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral-induced lysis of the endosome involved in uptake of a virus into a host cell. Occurs after internalization of the virus through the endosomal pathway, and results in release of the viral contents from the endosome into the host cell cytoplasm.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysis of host organelle involved in viral entry into host cell","termid":"GO:0039664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endosome lysis involved in viral entry into host cell","synonyms":[{"name":"viral entry into host cell via caveolae-mediated endocytosis followed by endosome lysis","type":"exact"}],"termid":"GO:0075514"}


id: PBO:0111846
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ranBP","termid":"PBO:0111846"}


id: PBO:0003559
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paroxysmal nocturnal haemoglobinuri","termid":"PBO:0003559"}


id: PBO:0058880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10396b","termid":"PBO:0058880"}


id: GO:0072226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric long descending thin limb bend over time, from its formation to the mature structure. The metanephric long descending thin limb bend is a part of the descending thin limb of a long nephron that lies beyond the prebend segment in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long descending thin limb bend development","termid":"GO:0072065"},{"relation_name":"part_of","term_name":"metanephric descending thin limb development","termid":"GO:0072220"},{"relation_name":"part_of","term_name":"metanephric long descending thin limb development","termid":"GO:0072269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric long descending thin limb bend development","termid":"GO:0072226"}


id: FYPO:0001974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a greater than normal number of cells contain 1C DNA content. This may result from cell cycle arrest or delay.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased number of cells with 1C DNA content","synonyms":[{"name":"increased amount of cells with 1C DNA content","type":"exact"},{"name":"increased number of cells containing 1C DNA","type":"exact"}],"termid":"FYPO:0001974"}


id: PBO:0087118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING domain E3 ubiquitin ligase; involved in ubiquitin-mediated degradation of non-stop proteins and translationally stalled ER membrane proteins; component of ribosome-bound RQC (ribosome quality control) complex; degrades products of mRNAs lacking a termination codon regardless of a poly(A) tail; functional connections to chromatin modification; homolog of mouse Listerin, mutations in which reported to cause neurodegeneration","termid":"PBO:0087118"}


id: GO:0048935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a neuron whose cell body is located in the peripheral nervous system, from initial commitment of the cell to a neuronal fate, to the fully functional differentiated neuron.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"peripheral nervous system neuron differentiation","termid":"GO:0048934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system neuron development","termid":"GO:0048935"}


id: GO:0031394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of prostaglandin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of prostaglandin biosynthetic process","termid":"GO:0031392"},{"relation_name":"is_a","term_name":"positive regulation of unsaturated fatty acid biosynthetic process","termid":"GO:2001280"},{"relation_name":"positively_regulates","term_name":"prostaglandin biosynthetic process","termid":"GO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of prostaglandin biosynthetic process","synonyms":[{"name":"activation of prostaglandin biosynthetic process","type":"narrow"},{"name":"positive regulation of prostaglandin anabolism","type":"exact"},{"name":"positive regulation of prostaglandin biosynthesis","type":"exact"},{"name":"positive regulation of prostaglandin formation","type":"exact"},{"name":"positive regulation of prostaglandin synthesis","type":"exact"},{"name":"stimulation of prostaglandin biosynthetic process","type":"narrow"},{"name":"up regulation of prostaglandin biosynthetic process","type":"exact"},{"name":"up-regulation of prostaglandin biosynthetic process","type":"exact"},{"name":"upregulation of prostaglandin biosynthetic process","type":"exact"}],"termid":"GO:0031394"}


id: GO:0045093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to alpha subunit of interleukin-18. IL-18a is a component of IL-18 that is essential for IL-18 binding on the surface of T-helper 1 cells.","definition_xrefs":["PMID:10653850"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-18 alpha subunit binding (obsolete GO:0045093)","synonyms":[{"name":"IL-18Ra binding","type":"exact"}],"termid":"GO:0045093"}


id: MONDO:0003333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature monodermal teratoma that arises from the ovary and is characterized by the presence of benign, thyroid-type tissues.","definition_xrefs":["NCIT:C40012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"},{"relation_name":"is_a","term_name":"struma ovarii","termid":"MONDO:0006980"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign struma ovarii","secondary_identifiers":["DOID:5209"],"synonyms":[{"name":"benign struma ovarii","type":"exact"},{"name":"struma ovarii, benign","type":"exact"}],"termid":"MONDO:0003333","xrefs":{"Monarch":{"xref_id":"0003333"}}}


id: GO:0034103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tissue remodeling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"tissue remodeling","termid":"GO:0048771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tissue remodeling","synonyms":[{"name":"regulation of tissue remodelling","type":"exact"}],"termid":"GO:0034103"}


id: PBO:0073409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 12","termid":"PBO:0073409"}


id: PBO:0066302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 4","termid":"PBO:0066302"}


id: MONDO:0024744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the choroid plexus in the brain and occurs during childhood.","definition_xrefs":["NCIT:C42080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choroid plexus neoplasm","termid":"MONDO:0016717"},{"relation_name":"is_a","term_name":"childhood neoplasm","termid":"MONDO:0021079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood choroid plexus neoplasm","secondary_identifiers":["MEDGEN:76132","UMLS:C0280623"],"synonyms":[{"name":"childhood choroid plexus neoplasm","type":"exact"},{"name":"choroid plexus neoplasm","type":"broad"},{"name":"choroid plexus neoplasm of childhood","type":"exact"},{"name":"paediatric choroid plexus neoplasm","type":"exact"},{"name":"pediatric choroid plexus neoplasm","type":"exact"}],"termid":"MONDO:0024744","xrefs":{"Monarch":{"xref_id":"0024744"}}}


id: PBO:0080758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XG pseudogene, Y-linked 1","termid":"PBO:0080758"}


id: PATO:0000772
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A preference quality in a bearer by virtue of the bearer's having no preference to a perceived stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preference","termid":"PATO:0000773"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indifference","termid":"PATO:0000772"}


id: PBO:0083231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely within telomere TEL08L","termid":"PBO:0083231"}


id: PBO:0000900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Fsv1","termid":"PBO:0000900"}


id: GO:0061888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of astrocyte activation.","definition_xrefs":["PMID:20005821","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of astrocyte differentiation","termid":"GO:0048710"},{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"regulates","term_name":"astrocyte activation","termid":"GO:0048143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of astrocyte activation","termid":"GO:0061888"}


id: PBO:0029746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_calcium_export","termid":"PBO:0029746"}


id: PBO:0058197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4490","termid":"PBO:0058197"}


id: PBO:0060203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin like 1","termid":"PBO:0060203"}


id: PBO:0060517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"napsin B aspartic peptidase, pseudogene","termid":"PBO:0060517"}


id: PBO:0053249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 3","termid":"PBO:0053249"}


id: MONDO:0016284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primitive neuroectodermal tumor of the cervix uteri is a rare cancer of cervix uteri derived from neural crest cells, histologically composed of small, round neoplatic cells with variable degree of neural, glial and ependymal differentiation. Macroscopically, the tumor is often a large, soft, poorly circumscribed mass with infiltrative borders and necrotic areas. It presents with dysfunctional vaginal bleeding or discharge, lower abdominal pain and uterine enlargement.","definition_xrefs":["Orphanet:213812"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma of cervix uteri","termid":"MONDO:0016280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"primitive neuroectodermal tumor of the cervix uteri","secondary_identifiers":["GARD:20496","UMLS:C4707725","ICD10CM:C53.0","MEDGEN:1636418"],"synonyms":[{"name":"cervical malignant peripheral neuroectodermal tumor","type":"exact"},{"name":"cervical malignant peripheral neuroectodermal tumour","type":"exact"},{"name":"cervical peripheral neuroectodermal cancer","type":"exact"},{"name":"malignant peripheral neuroectodermal tumor of the cervix uteri","type":"exact"},{"name":"malignant peripheral neuroectodermal tumour of the cervix uteri","type":"exact"},{"name":"peripheral neuroectodermal cancer of cervix uteri","type":"exact"}],"termid":"MONDO:0016284","xrefs":{"Monarch":{"xref_id":"0016284"}}}


id: PBO:0028503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_mitotic_sister_chromatid_segregation","termid":"PBO:0028503"}


id: PBO:0075876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL3 antisense RNA 1","termid":"PBO:0075876"}


id: GO:0016462
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id: PR:O94261
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta3 gene.","definition_xrefs":["UniProtKB:O94261","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.12c","synonyms":[{"name":"Spom972h-fta3","type":"exact"},{"name":"sim4 complex subunit fta3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94261"}


id: FYPO:0001087
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glucosyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal glucosyltransferase activity","termid":"FYPO:0001087"}


id: GO:0000468
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in generating the mature 3'-end of an LSU-rRNA derived from a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:10690410","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 3'-end processing","termid":"GO:0031125"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0044085","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","synonyms":[{"name":"processing at B2","type":"narrow"}],"termid":"GO:0000468"}


id: GO:0008520
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: L-ascorbate(out) + Na+(out) = L-ascorbate(in) + Na+(in).","definition_xrefs":["GOC:mah","GOC:yaf","PMID:18094143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid:sodium symporter activity","termid":"GO:0005343"},{"relation_name":"is_a","term_name":"carbohydrate:monoatomic cation symporter activity","termid":"GO:0005402"},{"relation_name":"is_a","term_name":"monosaccharide transmembrane transporter activity","termid":"GO:0015145"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-ascorbate:sodium symporter activity","secondary_identifiers":["RHEA:69883","TC:2.A.40.6.1","GO:0070890"],"synonyms":[{"name":"sodium-dependent L-ascorbate transmembrane transporter activity","type":"related"},{"name":"sodium-dependent L-ascorbic acid transporter","type":"related"}],"termid":"GO:0008520"}


id: MONDO:0971154
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic porphyria","termid":"MONDO:0002520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0005066"],"is_obsolete":false,"name":"hepatic cutaneous porphyria","secondary_identifiers":["Orphanet:659698"],"termid":"MONDO:0971154","xrefs":{"Monarch":{"xref_id":"0971154"}}}


id: PBO:0018282
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Cmp7 (predicted)","termid":"PBO:0018282"}


id: GO:0034937
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id: RO:0002637
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  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of mesoparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_mesoparasite","termid":"RO:0002637"}


id: GO:0106298
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of resolvin family 13-series, hydroxy fatty acids derived from docosapentaenoic acid.","definition_xrefs":["PMID:26236990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resolvin biosynthetic process","termid":"GO:0106295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"13-series resolvin biosynthetic process","termid":"GO:0106298"}


id: PBO:0049521
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.L variant histone 3","termid":"PBO:0049521"}


id: GO:0180033
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id: GO:0043997
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id: PBO:0029354
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id: PBO:0090878
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id: MONDO:0100487
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A platelet disorder in which the cause of the disease is a variant in the TPM4 gene.","definition_xrefs":["PMID:34758189","PMID:28134622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood platelet disease","termid":"MONDO:0002245"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"TPM4-related platelet disorder","synonyms":[{"name":"TPM4-related platelet dysfunction with or without thrombocytopenia","type":"exact"}],"termid":"MONDO:0100487","xrefs":{"Monarch":{"xref_id":"0100487"}}}


id: MONDO:0032692
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id: MONDO:1010352
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia, isolated, with coloboma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coloboma, non-human animal","termid":"MONDO:1010319"},{"relation_name":"is_a","term_name":"microphthalmia, non-human animal","termid":"MONDO:1010324"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma, non-human animal","secondary_identifiers":["OMIA:002151"],"termid":"MONDO:1010352","xrefs":{"Monarch":{"xref_id":"1010352"}}}


id: PBO:0058313
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id: PR:P26674
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ste6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P26674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ste6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.01","synonyms":[{"name":"Spom972h-ste6","type":"exact"}],"termid":"PR:P26674"}


id: PBO:0080488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 7","termid":"PBO:0080488"}


id: GO:0009527
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the plastid envelope.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle outer membrane","termid":"GO:0031968"},{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid outer membrane","termid":"GO:0009527"}


id: PBO:0029150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_diamide","termid":"PBO:0029150"}


id: MONDO:0017232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recessive intellectual disability-motor dysfunction-multiple joint contractures syndrome is a rare, genetic, syndromic intellectual disability disorder characterized by severe intellectual disability, progressive, postnatal, multiple joint contractures and severe motor dysfunction. Patients present arrest and regression of motor function and speech acquisition, as well as contractures which begin in lower limbs and slowly progress in an ascending manner to include spine and neck, resulting in individuals presenting a specific fixed position.","definition_xrefs":["Orphanet:280384"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recessive intellectual disability-motor dysfunction-multiple joint contractures syndrome","secondary_identifiers":["MEDGEN:1659846","GARD:21083","UMLS:C4749580"],"synonyms":[{"name":"IDMDC","type":"exact"}],"termid":"MONDO:0017232","xrefs":{"Monarch":{"xref_id":"0017232"}}}


id: MONDO:0006332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian choriocarcinoma (obsolete MONDO:0006332)","termid":"MONDO:0006332","xrefs":{"Monarch":{"xref_id":"0006332"}}}


id: MONDO:0007815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency with defective leukocyte and lymphocyte function and with response to histamine-1 antagonist (obsolete MONDO:0007815)","termid":"MONDO:0007815","xrefs":{"Monarch":{"xref_id":"0007815"}}}


id: GO:2000878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oligopeptide transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of oligopeptide transport","termid":"GO:0090088"},{"relation_name":"positively_regulates","term_name":"oligopeptide transport","termid":"GO:0006857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of oligopeptide transport","termid":"GO:2000878"}


