# terms

id: MONDO:0700273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cancer predisposition due to variation(s) in the RAD51C gene. Pathogenic germline variation in RAD51C confers an autosomal dominant predisposition to tumor formation at multiple primary sites, including ovarian cancer, triple negative breast cancer and ER negative breast cancer.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51C-related cancer predisposition","termid":"MONDO:0700273","xrefs":{"Monarch":{"xref_id":"0700273"}}}


id: PBO:0034154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-innervates","termid":"PBO:0034154"}


id: MONDO:0000105
data:
  {"annotated_genes":["SJAG_02297"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nonspherocytic hemolytic anemia","termid":"MONDO:0006506"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"anemia, nonspherocytic hemolytic","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4025735","MEDGEN:871250"],"termid":"MONDO:0000105","terms_by_termid":{"MONDO:0010480":null},"xrefs":{"Monarch":{"xref_id":"0000105"}}}


id: PBO:0051641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol monophosphatase 1","termid":"PBO:0051641"}


id: PBO:0067935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 237","termid":"PBO:0067935"}


id: GO:0003849
data:
  {"annotated_genes":["SJAG_03580","SJAG_00224"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77271,78655],"is_not":false,"summary":null,"term":"GO:0003849"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-erythrose 4-phosphate + H2O + phosphoenolpyruvate = 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate + phosphate.","definition_xrefs":["EC:2.5.1.54","RHEA:14717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00224":null,"SJAG_03580":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"3-deoxy-7-phosphoheptulonate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01826","MetaCyc:DAHPSYN-RXN"],"synonyms":[{"name":"2-dehydro-3-deoxy-phosphoheptonate aldolase activity","type":"related"},{"name":"2-dehydro-3-deoxyphosphoheptonate aldolase activity","type":"exact"},{"name":"2-keto-3-deoxy-D-arabino-heptonic acid 7-phosphate synthetase activity","type":"related"},{"name":"3-deoxy-D-arabino-2-heptulosonic acid 7-phosphate synthetase activity","type":"related"},{"name":"3-deoxy-D-arabino-heptolosonate-7-phosphate synthetase activity","type":"related"},{"name":"3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase activity","type":"related"},{"name":"7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate","type":"related"},{"name":"7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate D-erythrose-4-phosphate lyase (pyruvate-phosphorylating) activity","type":"related"},{"name":"7-phospho-2-keto-3-deoxy-D-arabino-heptonate D-erythrose-4-phosphate lyase (pyruvate-phosphorylating) activity","type":"related"},{"name":"D-erythrose-4-phosphate-lyase (pyruvate-phosphorylating) activity","type":"related"},{"name":"D-erythrose-4-phosphate-lyase activity","type":"related"},{"name":"DAH7-P synthase activity","type":"related"},{"name":"DAHP synthase activity","type":"related"},{"name":"DHAP synthase activity","type":"related"},{"name":"DS-Co activity","type":"related"},{"name":"DS-Mn activity","type":"related"},{"name":"KDPH synthase activity","type":"related"},{"name":"KDPH synthetase activity","type":"related"},{"name":"deoxy-D-arabino-heptulosonate-7-phosphate synthetase activity","type":"related"},{"name":"phospho-2-dehydro-3-deoxyheptonate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxyheptanoate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxyheptonate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxyheptonic aldolase activity","type":"related"},{"name":"phospho-2-oxo-3-deoxyheptonate aldolase activity","type":"related"},{"name":"phosphoenolpyruvate:D-erythrose-4-phosphate C-(1-carboxyvinyl)transferase (phosphate-hydrolysing, 2-carboxy-2-oxoethyl-forming)","type":"related"}],"termid":"GO:0003849","terms_by_termid":{"GO:0003849":null}}


id: FYPO:0002778
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of sumoylation of one or more specific proteins, or of specific protein sites, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein sumoylation during vegetative growth","termid":"FYPO:0002777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"decreased protein sumoylation during vegetative growth","synonyms":[{"name":"decreased protein sumolation during vegetative growth","type":"exact"},{"name":"decreased protein sumoylation during mitotic cell cycle","type":"related"},{"name":"reduced protein sumoylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002778"}


id: PBO:0109051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL3 pseudogene 2","termid":"PBO:0109051"}


id: GO:0019231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The perception of the orientation of different parts of the body with respect to one another.","definition_xrefs":["ISBN:072168677X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proprioception","termid":"GO:0019230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perception of static position","termid":"GO:0019231"}


id: PBO:0063616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1","termid":"PBO:0063616"}


id: MONDO:0011242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bartter syndrome in which the cause of the disease is a mutation in the BSND gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bartter syndrome type 4","termid":"MONDO:0019524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Bartter disease type 4A","secondary_identifiers":["OMIM:602522","DOID:0110145","GARD:15348","UMLS:C1865270","SCTID:717791000","MEDGEN:355430"],"synonyms":[{"name":"BARTS4A","type":"exact"},{"name":"BSND","type":"exact"},{"name":"BSND Bartter syndrome","type":"exact"},{"name":"Bartter disease type 4a","type":"exact"},{"name":"Bartter syndrome caused by mutation in BSND","type":"exact"},{"name":"Bartter syndrome type 4a","type":"exact"},{"name":"Bartter syndrome, infantile, with sensorineural deafness","type":"related"},{"name":"Bartter syndrome, neonatal, with sensorineural deafness","type":"related"},{"name":"Bartter syndrome, type 4A","type":"related"},{"name":"Bartter syndrome, type 4A, neonatal, with sensorineural deafness","type":"related"},{"name":"neonatal Bartter syndrome with sensorineural deafness","type":"exact"},{"name":"sensorineural deafness with mild renal dysfunction","type":"related"}],"termid":"MONDO:0011242","xrefs":{"Monarch":{"xref_id":"0011242"}}}


id: PBO:0039015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG3L2 pseudogene 1","termid":"PBO:0039015"}


id: MONDO:0015869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of breast benign neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare benign breast tumor (obsolete MONDO:0015869)","secondary_identifiers":["Orphanet:180253"],"synonyms":[{"name":"rare breast benign neoplasm","type":"exact"}],"termid":"MONDO:0015869","xrefs":{"Monarch":{"xref_id":"0015869"}}}


id: MONDO:0850150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A kidney disease that is located in the kidney cortex.","definition_xrefs":["DOID:0080616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney cortex disease","termid":"MONDO:0850150","xrefs":{"Monarch":{"xref_id":"0850150"}}}


id: MONDO:0007234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branchial myoclonus with spastic paraparesis and cerebellar ataxia","secondary_identifiers":["UMLS:C1862071","MEDGEN:349424","MESH:C566188","OMIM:113610"],"synonyms":[{"name":"branchial myoclonus with spastic paraparesis and cerebellar ataxia","type":"exact"}],"termid":"MONDO:0007234","xrefs":{"Monarch":{"xref_id":"0007234"}}}


id: GO:1902541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A micropinocytosis which involves another organism.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism micropinocytosis (obsolete GO:1902541)","termid":"GO:1902541"}


id: GO:0031466
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul5 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by an elongin-BC adaptor and a SOCS/BC box protein.","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul5-RING ubiquitin ligase complex","synonyms":[{"name":"CDL5 complex","type":"exact"},{"name":"CRL5 complex","type":"exact"},{"name":"EC2S complex","type":"broad"},{"name":"SCF5 complex","type":"related"},{"name":"cullin-RING ligase 5","type":"exact"}],"termid":"GO:0031466"}


id: PBO:0042531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 5 regulatory subunit 1","termid":"PBO:0042531"}


id: PBO:0066173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 6","termid":"PBO:0066173"}


id: PBO:0113203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Middle sporulation-specific mitogen-activated protein kinase (MAPK); required for prospore membrane development and the production of outer spore wall layers; promotes deposition of the glucan layer of the spore wall by regulating the localization of Gsc2p to sites of spore wall assembly in postmeiotic cells; activated by Cak1p-mediated phosphorylation of threonine (T207) in the activation loop during meiosis I followed by Ssp2p-promoted autophosphorylation of tyrosine (T209) during meiosis II","termid":"PBO:0113203"}


id: GO:0080066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-methylthiopropyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 3-methylthiopropyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-methylthiopropyl-desulfoglucosinolate sulfotransferase activity (obsolete GO:0080066)","termid":"GO:0080066"}


id: GO:0061301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the vasculature of the cerebellum is generated and organized.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellum development","termid":"GO:0021549"},{"relation_name":"part_of","term_name":"cerebellum vasculature development","termid":"GO:0061300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellum vasculature morphogenesis","termid":"GO:0061301"}


id: GO:0002846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of T cell tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell mediated immune response to tumor cell","termid":"GO:0002840"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to tumor cell","termid":"GO:0002843"},{"relation_name":"is_a","term_name":"regulation of peripheral T cell tolerance induction","termid":"GO:0002849"},{"relation_name":"regulates","term_name":"T cell tolerance induction to tumor cell","termid":"GO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell tolerance induction to tumor cell","termid":"GO:0002846"}


id: PBO:0080123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAMP1 antisense RNA 1","termid":"PBO:0080123"}


id: MOD:02074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-lysine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-lysine residue","termid":"MOD:02074"}


id: MONDO:1011040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any oculocutaneous albinism that occurs in cattle due to a mutation in the SLC45A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, SLC45A2-related, cattle","secondary_identifiers":["OMIA:001821-9913"],"synonyms":[{"name":"coat color albinism, oculocutaneous type IV, cattle","type":"related"}],"termid":"MONDO:1011040","xrefs":{"Monarch":{"xref_id":"1011040"}}}


id: MOD:00064
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-acetyl-L-lysine.","definition_xrefs":["ChEBI:17752","PubMed:11857757","PubMed:11369851","PubMed:14730666","PubMed:15350136","PubMed:1680872","DeltaMass:214","OMSSA:24","PubMed:670159","Unimod:1#K","RESID:AA0055","PubMed:11999733","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylated L-lysine","termid":"MOD:00723"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"},{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:00408","MOD:01875"],"is_obsolete":false,"name":"N6-acetyl-L-lysine","synonyms":[{"name":"(2S)-6-acetamido-2-aminohexanoic acid","type":"exact"},{"name":"6-acetylamino-2-aminohexanoic acid","type":"exact"},{"name":"6-acetylazanyl-2-aminohexanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"Acetylation","type":"related"},{"name":"MOD_RES N6-acetyllysine","type":"exact"},{"name":"N(zeta)-acetyllysine","type":"exact"},{"name":"N6-acetyl-L-lysine","type":"exact"},{"name":"N6-acetylated L-lysine","type":"exact"},{"name":"N6AcLys","type":"exact"},{"name":"acetylk","type":"exact"},{"name":"epsilon-acetyllysine","type":"exact"}],"termid":"MOD:00064"}


id: GO:0061989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chromosome organization process in which meiotic chromosomes in the spem nucleus cluster together to form a compact spherical structure called the karyosome.","definition_xrefs":["PMID:19696886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyosome formation","termid":"GO:0061988"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"sperm karyosome formation","termid":"GO:0061989"}


id: PATO:0002226
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cylindrical shape quality inhering in a bearer by virtue of the bearer's being imperfectly cylindrical or approximately cylindrical.","direct_ancestors":[{"relation_name":"is_a","term_name":"cylindrical","termid":"PATO:0001873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subcylindrical","termid":"PATO:0002226"}


id: MONDO:0014240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any periventricular nodular heterotopia in which the cause of the disease is a mutation in the ERMARD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periventricular nodular heterotopia","termid":"MONDO:0020341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"periventricular nodular heterotopia 6","secondary_identifiers":["MEDGEN:816202","UMLS:C3809872","GARD:15983","OMIM:615544"],"synonyms":[{"name":"ERMARD periventricular nodular heterotopia","type":"exact"},{"name":"PVNH6","type":"related"},{"name":"periventricular nodular heterotopia 6","type":"exact"},{"name":"periventricular nodular heterotopia caused by mutation in ERMARD","type":"exact"},{"name":"periventricular nodular heterotopia type 6","type":"exact"}],"termid":"MONDO:0014240","xrefs":{"Monarch":{"xref_id":"0014240"}}}


id: PBO:0039397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 2","termid":"PBO:0039397"}


id: PBO:0001929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinate phosphoribosyltransferase (predicted)","termid":"PBO:0001929"}


id: PBO:0046374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosome associated trafficking regulator 1","termid":"PBO:0046374"}


id: MONDO:0957113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurological muscular channelopathy due to a genetic calcium channel defect","secondary_identifiers":["GARD:19565","UMLS:C5681686","MEDGEN:1842522","Orphanet:98740"],"termid":"MONDO:0957113","xrefs":{"Monarch":{"xref_id":"0957113"}}}


id: PBO:0003493
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focus formation at DNA damage sites, Swi5_dependent","termid":"PBO:0003493"}


id: PBO:0088027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2-snRNP associated splicing factor; similar to the mammalian splicing factor SAP49; proposed to function as a U2-snRNP assembly factor along with Hsh155p and binding partner Cus1p; contains two RNA recognition motifs (RRM)","termid":"PBO:0088027"}


id: PBO:0072244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 19","termid":"PBO:0072244"}


id: GO:0061855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuroblast migration.","definition_xrefs":["PMID:23149556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"regulation of neuroblast migration","termid":"GO:0061853"},{"relation_name":"negatively_regulates","term_name":"neuroblast migration","termid":"GO:0097402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuroblast migration","termid":"GO:0061855"}


id: GO:0018867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alpha-pinene, a monoterpene that may be a significant factor affecting bacterial activities in nature. It is a major component in tea-tree oils, and gives off a piney smelling odor.","definition_xrefs":["UM-BBD_pathwayID:apn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinene metabolic process","termid":"GO:0033073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"alpha-pinene metabolic process","synonyms":[{"name":"alpha-pinene metabolism","type":"exact"}],"termid":"GO:0018867"}


id: PBO:0090350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase AMPK (beta) regulatory subunit Amk2","termid":"PBO:0090350"}


id: PBO:0042897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor H related 1","termid":"PBO:0042897"}


id: PBO:0061824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 14 Y-linked","termid":"PBO:0061824"}


id: PBO:0088965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi mannan polymerase I complex subunit Mnn9","termid":"PBO:0088965"}


id: PBO:0077423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 161B","termid":"PBO:0077423"}


id: GO:0036188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: abieta-7,13-diene-18-al + H2O + NAD+ = abieta-7,13-diene-18-oate + NADH + H+.","definition_xrefs":["EC:1.2.1.74"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"abieta-7,13-dien-18-al dehydrogenase activity","secondary_identifiers":["RHEA:26225","KEGG_REACTION:R06357","MetaCyc:RXN-10624"],"synonyms":[{"name":"abietadienal dehydrogenase","type":"broad"}],"termid":"GO:0036188"}


id: PBO:0073046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small cysteine and glycine repeat containing 4","termid":"PBO:0073046"}


id: PBO:0049710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 associated protein kinase","termid":"PBO:0049710"}


id: FYPO:0006104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of retrotransposon integration is decreased.","definition_xrefs":["PMID:26358720","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transposition","termid":"FYPO:0000591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased retrotransposon integration","synonyms":[{"name":"decreased retrotransposon integration during mitotic cell cycle","type":"related"},{"name":"decreased retrotransposon integration during vegetative growth","type":"exact"},{"name":"decreased transposon integration involved in RNA-mediated transposition","type":"exact"},{"name":"reduced retrotransposon integration","type":"exact"}],"termid":"FYPO:0006104"}


id: GO:0023049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a protein/peptide signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by protein/peptide mediator (obsolete GO:0023049)","synonyms":[{"name":"signal initiation by protein/peptide mediator","type":"exact"}],"termid":"GO:0023049"}


id: GO:0047948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CoA + glutarate = ADP + glutaryl-CoA + H+ + phosphate.","definition_xrefs":["EC:6.2.1.6","RHEA:14169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutarate-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R02402","MetaCyc:GLUTARATE--COA-LIGASE-RXN"],"synonyms":[{"name":"glutarate:CoA ligase (ADP-forming)","type":"related"},{"name":"glutaryl coenzyme A synthetase activity","type":"related"},{"name":"glutaryl-CoA synthetase activity","type":"related"}],"termid":"GO:0047948"}


id: MOD:00389
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to N-formyl-L-proline.","definition_xrefs":["PubMed:12051774","RESID:AA0384","PubMed:5464655","Unimod:122#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-formyl-L-proline","synonyms":[{"name":"(2S)-1-formylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"1-formyl-2-pyrrolidinecarboxylic acid","type":"exact"},{"name":"1-formylproline","type":"exact"},{"name":"N-formyl-L-proline","type":"exact"},{"name":"N-formylated L-proline","type":"exact"},{"name":"NFoPro","type":"exact"}],"termid":"MOD:00389"}


id: MONDO:0100439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any glycogen storage disease in which the cause of the disease is a mutation in the PHKA2 gene, with no PHK in liver, but normal activity in erythrocytes.","definition_xrefs":["OMIM:306000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of glycogen metabolism","termid":"MONDO:0002412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease IXa2","secondary_identifiers":["UMLS:C2748941","MEDGEN:411335"],"synonyms":[{"name":"GSD IXa2","type":"exact"},{"name":"GSD9A2","type":"exact"},{"name":"liver glycogenosis, X-linked, type 2","type":"exact"}],"termid":"MONDO:0100439","xrefs":{"Monarch":{"xref_id":"0100439"}}}


id: SO:0001649
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat that is disrupted by the insertion of another element.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nested_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:nested","type":"exact"},{"name":"nested repeat","type":"exact"}],"termid":"SO:0001649"}


id: PBO:0060095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 42","termid":"PBO:0060095"}


id: GO:1901231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of non-canonical Wnt signaling pathway via JNK cascade.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of non-canonical Wnt signaling pathway via JNK cascade (obsolete GO:1901231)","synonyms":[{"name":"activation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"narrow"},{"name":"activation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"narrow"},{"name":"positive regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"positive regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"positive regulation of non-canonical Wnt-activated signaling pathway via JNK cascade","type":"exact"},{"name":"up regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"up regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"up-regulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"up-regulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"},{"name":"upregulation of non-canonical Wnt receptor signaling pathway via JNK cascade","type":"exact"},{"name":"upregulation of non-canonical Wnt receptor signalling pathway via JNK cascade","type":"exact"}],"termid":"GO:1901231"}


id: MONDO:0011655
data:
  {"annotated_genes":["SJAG_00490"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86633],"is_not":false,"summary":null,"term":"MONDO:0011655"}]},"cv_name":"mondo","definition":"An alveolar soft part sarcoma occurring in adults. The most common site of involvement is the extremity, particularly the deep soft tissues of the thigh.","definition_xrefs":["NCIT:C7943"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skeletal muscle cancer","termid":"MONDO:0002847"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00490":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"alveolar soft part sarcoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:4239","ICDO:9581/3","GARD:5654","EFO:0007143","ONCOTREE:ASPS","HP:0012218","OMIM:606243","MedDRA:10001882","MEDGEN:61652","MESH:D018234","NCIT:C3750","NORD:760","Orphanet:163699","NANDO:2200063","SCTID:404056007","ICD9:171.9","UMLS:C0206657"],"synonyms":[{"name":"ASPS","type":"exact"},{"name":"adult alveolar soft Part sarcoma","type":"exact"},{"name":"adult alveolar soft part sarcoma","type":"exact"},{"name":"adult alveolar soft-Part sarcoma","type":"exact"},{"name":"alveolar soft PART sarcoma","type":"related"},{"name":"alveolar soft Part sarcoma","type":"exact"},{"name":"alveolar soft part sarcoma","type":"exact"},{"name":"alveolar soft part sarcoma (disease)","type":"exact"},{"name":"alveolar soft tissue sarcoma","type":"related"},{"name":"alveolar soft-part sarcoma","type":"exact"},{"name":"alveolar soft-tissue sarcoma","type":"related"},{"name":"childhood alveolar soft part sarcoma","type":"narrow"},{"name":"paediatric alveolar soft Part sarcoma","type":"narrow"},{"name":"pediatric alveolar soft Part sarcoma","type":"narrow"}],"termid":"MONDO:0011655","terms_by_termid":{"MONDO:0011655":null},"xrefs":{"Monarch":{"xref_id":"0011655"}}}


id: SO:0000858
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a kind of homology where divergence occurred after a speciation event.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homologous","termid":"SO:0000857"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous","termid":"SO:0000858"}


id: PBO:0044928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase gamma","termid":"PBO:0044928"}


id: MONDO:0030984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 75","secondary_identifiers":["MEDGEN:1804291","UMLS:C5677014","DOID:0070574","OMIM:619949"],"synonyms":[{"name":"SPGF75","type":"exact"},{"name":"spermatogenic failure 75","type":"exact"}],"termid":"MONDO:0030984","xrefs":{"Monarch":{"xref_id":"0030984"}}}


id: PBO:0045732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EAF1 antisense RNA 1","termid":"PBO:0045732"}


id: GO:1900527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of nucleus size that is involved in G1 to G0 transition.","definition_xrefs":["GOC:TermGenie","GOC:al","PMID:19366728"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nucleus size involved in G1 to G0 transition (obsolete GO:1900527)","synonyms":[{"name":"regulation of nuclear size involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nuclear size involved in G1/G0 transition","type":"exact"},{"name":"regulation of nuclear size involved in cell cycle quiescence","type":"related"},{"name":"regulation of nuclear size involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nuclear size involved in stationary phase","type":"related"},{"name":"regulation of nuclear volume involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nuclear volume involved in G1/G0 transition","type":"exact"},{"name":"regulation of nuclear volume involved in cell cycle quiescence","type":"related"},{"name":"regulation of nuclear volume involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nuclear volume involved in stationary phase","type":"related"},{"name":"regulation of nucleus size involved in G1 to G0 transition","type":"exact"},{"name":"regulation of nucleus size involved in G1/G0 transition","type":"exact"},{"name":"regulation of nucleus size involved in cell cycle quiescence","type":"related"},{"name":"regulation of nucleus size involved in establishment of cell quiescence","type":"exact"},{"name":"regulation of nucleus size involved in stationary phase","type":"related"}],"termid":"GO:1900527"}


id: GO:0007575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of nucleolar expansion.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar size increase (obsolete GO:0007575)","synonyms":[{"name":"nucleolar size increase","type":"exact"}],"termid":"GO:0007575"}


id: PBO:0074881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 60","termid":"PBO:0074881"}


id: PBO:0056031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphotoxin alpha","termid":"PBO:0056031"}


id: MONDO:1012399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anal sac gland carcinoma, non-human animal","termid":"MONDO:1011817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anal sac gland carcinoma, dog","secondary_identifiers":["OMIA:001500-9615"],"termid":"MONDO:1012399","xrefs":{"Monarch":{"xref_id":"1012399"}}}


id: PBO:0044697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX3 interacting lncRNA 1","termid":"PBO:0044697"}


id: PBO:0109636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit J4 (pseudogene)","termid":"PBO:0109636"}


id: FYPO:0003908
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small RNA (such as siRNA) derived from antisense transcription of genes that are expressed in response to stress measured in a cell is greater than normal. All stress-responsive genes, or a specific subset of such genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased antisense RNA level","termid":"FYPO:0003557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased stress response gene antisense RNA level","synonyms":[{"name":"increased antisense RNA level at stress response genes","type":"related"},{"name":"increased level of stress response gene antisense transcripts","type":"exact"},{"name":"increased stress response gene antisense RNA accumulation","type":"related"},{"name":"increased stress response gene antisense RNA level during mitotic cell cycle","type":"related"},{"name":"increased stress response gene antisense RNA level during vegetative growth","type":"exact"},{"name":"increased stress response gene antisense transcript level","type":"exact"}],"termid":"FYPO:0003908"}


id: PBO:0044022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 2 alpha 1","termid":"PBO:0044022"}


id: MOD:00771
data:
  {"annotated_genes":["SJAG_03012","SJAG_02592","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[119573,80980,119713,80981,119572,119574,119575,119714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 166.98-167.00 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.01 Da","termid":"MOD:00770"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_03012":null},"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 166.98-167.00 Da","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"termid":"MOD:00771","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: PBO:0092761
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_throughput_type","termid":"PBO:0092761"}


id: PBO:0091468
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human MUTYH","termid":"PBO:0091468"}


id: GO:0034714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type III transforming growth factor beta receptor.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta receptor binding","termid":"GO:0005160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type III transforming growth factor beta receptor binding","synonyms":[{"name":"TGF-beta type III binding","type":"exact"},{"name":"betaglycan binding","type":"related"},{"name":"transforming growth factor beta ligand binding to type III receptor","type":"related"},{"name":"transforming growth factor beta receptor type III binding","type":"exact"},{"name":"type IIII TGF-beta binding","type":"exact"}],"termid":"GO:0034714"}


id: PBO:0075448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 2 like","termid":"PBO:0075448"}


id: PBO:0078910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 1-1","termid":"PBO:0078910"}


id: PBO:0041192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUB1B-PAK6 readthrough","termid":"PBO:0041192"}


id: PBO:0116688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 17A","termid":"PBO:0116688"}


id: MONDO:0002530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant spindle cell melanoma (obsolete MONDO:0002530)","termid":"MONDO:0002530","xrefs":{"Monarch":{"xref_id":"0002530"}}}


id: GO:0010416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an arabinoxylan, a polymer containing a beta-1,4-linked D-xylose backbone decorated with arabinose side units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylan metabolic process","termid":"GO:0045491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"arabinoxylan-containing compound metabolic process","synonyms":[{"name":"arabinoxylan metabolic process","type":"related"},{"name":"arabinoxylan metabolism","type":"related"}],"termid":"GO:0010416"}


id: GO:0052809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of a carbon-oxygen bond in acharan sulfate, a glycosaminoglycan with a uniformly repeating disaccharide structure of alpha-D-N-acetylglucosaminyl-2-O-sulfo-alpha-L-iduronic acid.","definition_xrefs":["GOC:mengo_curators","PMID:19566715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acharan sulfate lyase activity","termid":"GO:0052809"}


id: PBO:0039306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 1, histone H2A dioxygenase","termid":"PBO:0039306"}


id: FYPO:0007907
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal when a cell is subject to amino acid starvation.","definition_xrefs":["PMID:34805795nPomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"increased protein phosphorylation during amino acid starvation","termid":"FYPO:0007907"}


id: MONDO:0012287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Stickler syndrome type 1","termid":"MONDO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005328"],"is_obsolete":false,"name":"Stickler syndrome, type I, nonsyndromic ocular","secondary_identifiers":["MESH:C563709","MEDGEN:322820","GARD:15461","OMIM:609508","UMLS:C1836080"],"synonyms":[{"name":"Stickler syndrome, atypical","type":"related"},{"name":"Stickler syndrome, type I, predominantly ocular","type":"related"},{"name":"Stickler syndrome, type i, nonsyndromic ocular","type":"exact"},{"name":"rhegmatogenous retinal detachment, autosomal dominant","type":"related"}],"termid":"MONDO:0012287","xrefs":{"Monarch":{"xref_id":"0012287"}}}


id: PBO:0058696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6824","termid":"PBO:0058696"}


id: PR:O42663
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27D7.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized but2-like protein C27D7.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.09c","synonyms":[{"name":"Spom972h-SPAC27D7.09c","type":"exact"}],"termid":"PR:O42663"}


id: MONDO:0010308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked condition caused by mutation(s) in the GATA1 gene, encoding erythroid transcription factor. It is characterized by thrombocytopenia, as well as abnormal platelet function and morphology. Dyserythropoietic anemia of variable severity may also be present.","definition_xrefs":["NCIT:C136653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia, X-linked, with or without dyserythropoietic anemia","secondary_identifiers":["UMLS:C3550789","OMIM:300367","MEDGEN:763703"],"synonyms":[{"name":"X-linked thrombocytopenia, with or without dyserythropoietic Anaemia","type":"exact"},{"name":"X-linked thrombocytopenia, with or without dyserythropoietic Anemia","type":"exact"},{"name":"XLTDA","type":"related"},{"name":"thrombocytopenia, X-linked, with or without dyserythropoietic anemia","type":"exact"},{"name":"thrombocytopenia, X-linked, with or without dyserythropoietic anemia, X-linked recessive","type":"exact"}],"termid":"MONDO:0010308","xrefs":{"Monarch":{"xref_id":"0010308"}}}


id: PBO:0078537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 29","termid":"PBO:0078537"}


id: MONDO:0044256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete skin/hair/eye pigmentation, variation in, 5 (obsolete MONDO:0044256)","secondary_identifiers":["OMIM:227240"],"synonyms":[{"name":"SHEP5","type":"related"},{"name":"skin/hair/eye pigmentation 5, Black/nonblack hair","type":"related"},{"name":"skin/hair/eye pigmentation 5, black/nonblack hair","type":"exact"},{"name":"skin/hair/eye pigmentation 5, dark/fair skin","type":"exact"},{"name":"skin/hair/eye pigmentation 5, dark/light eyes","type":"exact"},{"name":"skin/hair/eye pigmentation, variation IN, 5","type":"related"}],"termid":"MONDO:0044256","xrefs":{"Monarch":{"xref_id":"0044256"}}}


id: SO:0001761
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A dependent entity that inheres in a bearer, a sequence variant.","definition_xrefs":["PMID:17597783","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_attribute","termid":"SO:0000400"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_quality","synonyms":[{"name":"variant quality","type":"exact"}],"termid":"SO:0001761"}


id: GO:0008277
data:
  {"annotated_genes":["SJAG_02311","SJAG_00266","SJAG_02481","SJAG_01245","SJAG_02426"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100778,92416,93080,116769,108334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of G protein coupled receptor protein signaling pathway","type":"exact"},{"name":"regulation of G protein coupled receptor protein signalling pathway","type":"exact"},{"name":"regulation of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"regulation of G-protein coupled receptor protein signalling pathway","type":"exact"},{"name":"regulation of G-protein-coupled receptor protein signalling pathway","type":"exact"},{"name":"regulation of GPCR protein signaling pathway","type":"exact"},{"name":"regulation of GPCR protein signalling pathway","type":"exact"}],"termid":"GO:0008277","terms_by_termid":{"GO:0110034":null}}


id: PBO:0073325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 1","termid":"PBO:0073325"}


id: GO:0014043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuron maturation.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron maturation","termid":"GO:0014041"},{"relation_name":"is_a","term_name":"negative regulation of cell maturation","termid":"GO:1903430"},{"relation_name":"negatively_regulates","term_name":"neuron maturation","termid":"GO:0042551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron maturation","synonyms":[{"name":"down regulation of neuron maturation","type":"exact"},{"name":"down-regulation of neuron maturation","type":"exact"},{"name":"downregulation of neuron maturation","type":"exact"},{"name":"inhibition of neuron maturation","type":"narrow"}],"termid":"GO:0014043"}


id: MONDO:0958001
data:
  {"annotated_genes":["SJAG_04653"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86403],"is_not":false,"summary":null,"term":"MONDO:0958001"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04653":null},"genotype_count":0,"is_obsolete":false,"name":"Alfadhel syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1845825","OMIM:620655","UMLS:C5882735"],"termid":"MONDO:0958001","terms_by_termid":{"MONDO:0958001":null},"xrefs":{"Monarch":{"xref_id":"0958001"}}}


id: PR:P87178
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdi3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3D6.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.13c","synonyms":[{"name":"Spom972h-pdi3","type":"exact"}],"termid":"PR:P87178"}


id: PBO:0085660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mRNA turnover and ribosome assembly; required at post-transcriptional step for efficient retrotransposition; localizes to the nucleolus","termid":"PBO:0085660"}


id: internal:cv_version
data:
  {"annotation_feature_type":"gene","cv_name":"cv_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cv_version","termid":"internal:cv_version"}


id: FYPO:0002119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a specified transporter activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0002114","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased transporter activity","termid":"FYPO:0002119"}


id: PBO:0044397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 58, pseudogene","termid":"PBO:0044397"}


id: PBO:0060714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 11","termid":"PBO:0060714"}


id: MONDO:0013780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that has material basis in variation in the chromosome region 6q23.","definition_xrefs":["PMID:22083234","DOID:0110385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 63","secondary_identifiers":["GARD:15810","ICD10CM:H35.5","MEDGEN:482632","OMIM:614494","UMLS:C3281002"],"synonyms":[{"name":"RP63","type":"exact"},{"name":"retinitis pigmentosa 63","type":"exact"},{"name":"retinitis pigmentosa type 63","type":"exact"}],"termid":"MONDO:0013780","xrefs":{"Monarch":{"xref_id":"0013780"}}}


id: PBO:0014295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48-Ufd1-Npl4 complex subunit Ufd1 involved in ubiquitin-dependent protein catabolism (predicted)","termid":"PBO:0014295"}


id: PBO:0056543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF.2 cell line derived transforming sequence-like 2","termid":"PBO:0056543"}


id: GO:0097638
data:
  {"annotated_genes":["SJAG_02605","SJAG_04637","SJAG_00991","SJAG_03591","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100697],"is_not":false,"summary":null,"term":"GO:0097638"},{"annotations":[110913,93659,99210,92071],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905589"}]},"cv_name":"biological_process","definition":"The directed movement of L-arginine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:krc","PMID:8195186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_04637":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-arginine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0090467","GO:1902765"],"synonyms":[{"name":"L-arginine import into cell","type":"exact"},{"name":"arginine import","type":"broad"}],"termid":"GO:0097638","terms_by_termid":{"GO:0097638":null,"GO:1905589":null}}


id: PATO:0000936
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's terminating abruptly by having or as if having an end or point cut off.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"truncated","synonyms":[{"name":"truncate","type":"exact"}],"termid":"PATO:0000936"}


id: FYPO:0003214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to glucose starvation","synonyms":[{"name":"normal protein phosphorylation during cellular response to glucose depletion","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose deprivation","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose limitation","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during glucose starvation","type":"exact"}],"termid":"FYPO:0003214"}


id: PBO:0039912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 10 like","termid":"PBO:0039912"}


id: GO:0050362
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + 2-oxoglutarate = indolepyruvate + L-glutamate.","definition_xrefs":["MetaCyc:TRYPTOPHAN-AMINOTRANSFERASE-RXN","EC:2.6.1.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan aminotransferase activity","termid":"GO:0070529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-tryptophan:2-oxoglutarate aminotransferase activity","secondary_identifiers":["RHEA:14093"],"synonyms":[{"name":"5-hydroxytryptophan-ketoglutaric transaminase activity","type":"related"},{"name":"L-phenylalanine-2-oxoglutarate aminotransferase activity","type":"related"},{"name":"L-tryptophan aminotransferase activity","type":"broad"},{"name":"L-tryptophan transaminase activity","type":"broad"},{"name":"hydroxytryptophan aminotransferase activity","type":"related"},{"name":"tryptophan aminotransferase activity","type":"exact"},{"name":"tryptophan transaminase activity","type":"broad"}],"termid":"GO:0050362"}


id: GO:1905295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neural crest cell fate specification.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie","PMID:15073157","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of neural crest formation","termid":"GO:0090299"},{"relation_name":"is_a","term_name":"regulation of neural crest cell differentiation","termid":"GO:1905292"},{"relation_name":"regulates","term_name":"neural crest cell fate specification","termid":"GO:0014036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neural crest cell fate specification","termid":"GO:1905295"}


id: PBO:0050433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein K pseudogene 4","termid":"PBO:0050433"}


id: PBO:0028587
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unstable_protein_localization_to_growing_cell_tip","termid":"PBO:0028587"}


id: PBO:0001056
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.50","termid":"PBO:0001056"}


id: MONDO:0012882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major affective disorder 9","secondary_identifiers":["MEDGEN:398108","OMIM:612372","UMLS:C2700440","MESH:C567531"],"synonyms":[{"name":"MAFD9","type":"exact"},{"name":"MAJOR affective disorder 9","type":"related"},{"name":"bipolar affective disorder","type":"related"},{"name":"major affective disorder 9","type":"exact"},{"name":"major affective disorder-9, susceptibility to","type":"exact"}],"termid":"MONDO:0012882","xrefs":{"Monarch":{"xref_id":"0012882"}}}


id: PBO:0117004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL2RA antisense RNA 1","termid":"PBO:0117004"}


id: MONDO:0008500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striae distensae, familial","secondary_identifiers":["OMIM:185200","MEDGEN:348875","UMLS:C1861447","MESH:C566104"],"synonyms":[{"name":"striae distensae, familial","type":"exact"}],"termid":"MONDO:0008500","xrefs":{"Monarch":{"xref_id":"0008500"}}}


id: PR:P78965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutathione reductase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22912:SF27","PRO:DNx","OMA:SCHPO02853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.07","secondary_identifiers":["UniProtKB:P78965"],"synonyms":[{"name":"GR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GRase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GSR","type":"exact"}],"termid":"PR:P78965"}


id: MONDO:0010778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare abnormality of the neuroendocrine system that is characterized by episodic nausea and vomiting.","definition_xrefs":["PMID:25332060","PMID:22634989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine disorder","termid":"MONDO:0100070"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic vomiting syndrome","secondary_identifiers":["NANDO:2200919","icd11.foundation:1434288855","UMLS:C0152164","NANDO:2100258","MEDGEN:57509","OMIM:500007"],"synonyms":[{"name":"CVS","type":"related"},{"name":"Cvs-plus","type":"related"},{"name":"cyclic vomiting syndrome","type":"exact"},{"name":"cyclic vomiting syndrome with neuromuscular disease","type":"related"},{"name":"cyclic vomiting syndrome-plus","type":"related"}],"termid":"MONDO:0010778","xrefs":{"Monarch":{"xref_id":"0010778"}}}


id: GO:0006293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stabilization of the multiprotein complex involved in damage recognition, DNA helix unwinding, and endonucleolytic cleavage at the site of DNA damage as well as the unwound DNA. The stabilization of the protein-DNA complex ensures proper positioning of the preincision complex before the phosphodiester backbone of the damaged strand is cleaved 3' and 5' of the site of DNA damage.","definition_xrefs":["PMID:10197977","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0065003","GO:0006281","GO:0044085","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"nucleotide-excision repair, preincision complex stabilization","termid":"GO:0006293"}


id: GO:0030027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"},{"relation_name":"part_of","term_name":"cell leading edge","termid":"GO:0031252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lamellipodium","secondary_identifiers":["Wikipedia:Lamellipodia"],"termid":"GO:0030027"}


id: PBO:0077422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 161A","termid":"PBO:0077422"}


id: PBO:0056917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MINDY2 divergent transcript","termid":"PBO:0056917"}


id: PBO:0036313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase-activating protein Spa2","termid":"PBO:0036313"}


id: MONDO:0015056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired angioedema type 1 (AAE 1) is a type of acquired angioedema (AAE) characterized by acute edema in subcutaneous tissues, viscera and/or the upper airway.","definition_xrefs":["Orphanet:100056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired angioedema","termid":"MONDO:0019624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acquired angioedema type 1","secondary_identifiers":["MEDGEN:1814460","GARD:19748","UMLS:C5680380"],"synonyms":[{"name":"acquired angioneurotic edema type 1","type":"exact"},{"name":"acquired angioneurotic oedema type 1","type":"exact"}],"termid":"MONDO:0015056","xrefs":{"Monarch":{"xref_id":"0015056"}}}


id: PBO:0038301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rnacentral_identifier","termid":"PBO:0038301"}


id: PBO:0073258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 2","termid":"PBO:0073258"}


id: GO:0035435
data:
  {"annotated_genes":["SJAG_04990","SJAG_00547","SJAG_04241","SJAG_01059","SJAG_01033","SJAG_00233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110071,113113,116895],"is_not":false,"summary":null,"term":"GO:0035435"},{"annotations":[68229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990547"},{"annotations":[116178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180029"},{"annotations":[99727],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000185"}]},"cv_name":"biological_process","definition":"The process in which a phosphate is transported across a membrane.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate ion transport","termid":"GO:0006817"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_00547":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_04241":null,"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"phosphate ion transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphate ion membrane transport","type":"exact"}],"termid":"GO:0035435","terms_by_termid":{"GO:0035435":null,"GO:0180029":null,"GO:1990547":null,"GO:2000185":null}}


id: GO:0060480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a lung goblet cell. A goblet cell is a cell of the epithelial lining that produces and secretes mucins.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung secretory cell differentiation","termid":"GO:0061140"},{"relation_name":"part_of","term_name":"lobar bronchus epithelium development","termid":"GO:0060481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung goblet cell differentiation","synonyms":[{"name":"pulmonary goblet cell differentiation","type":"exact"}],"termid":"GO:0060480"}


id: FYPO:0001730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered level of substance in vacuole","termid":"FYPO:0001601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased level of substance in vacuole","synonyms":[{"name":"increased level of substance in vacuole during mitotic cell cycle","type":"related"},{"name":"increased level of substance in vacuole during vegetative growth","type":"exact"},{"name":"increased vacuolar level of substance","type":"exact"}],"termid":"FYPO:0001730"}


id: GO:0043798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glycerate + ATP = 2-phospho-D-glycerate + ADP.","definition_xrefs":["RHEA:27377","PMID:14413719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","termid":"GO:0016662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycerate 2-kinase activity","secondary_identifiers":["EC:2.7.1.165","MetaCyc:GKI-RXN"],"synonyms":[{"name":"D-glycerate 2-kinase activity","type":"exact"},{"name":"glycerate kinase","type":"broad"}],"termid":"GO:0043798"}


id: PBO:0081201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN2 divergent transcript","termid":"PBO:0081201"}


id: MONDO:1010677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microtia that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtia, non-human animal","termid":"MONDO:1010091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtia, sheep","secondary_identifiers":["OMIA:001952-9940"],"termid":"MONDO:1010677","xrefs":{"Monarch":{"xref_id":"1010677"}}}


id: MONDO:0017758
data:
  {"annotated_genes":["SJAG_00835","SJAG_01616","SJAG_03712","SJAG_03447","SJAG_04459","SJAG_01466","SJAG_04042","SJAG_04425","SJAG_03362","SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011790"},{"annotations":[86975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013761"},{"annotations":[85675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[85605,85606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009353"},{"annotations":[85583,85582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[86191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[87011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[86435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032705"},{"annotations":[87354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013382"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of metabolite absorption and transport","termid":"MONDO:0017757"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_01199":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_03362":null,"SJAG_03447":null,"SJAG_03712":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of vitamin and non-protein cofactor absorption and transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:309827","icd11.foundation:1112006621","MEDGEN:1842689","UMLS:C5681037","GARD:21350"],"synonyms":[{"name":"disorder of vitamin and non-protein cofactor absorption and transport","type":"exact"}],"termid":"MONDO:0017758","terms_by_termid":{"MONDO:0009238":null,"MONDO:0009353":null,"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0010184":null,"MONDO:0011790":null,"MONDO:0013382":null,"MONDO:0013761":null,"MONDO:0032705":null},"xrefs":{"Monarch":{"xref_id":"0017758"}}}


id: PBO:0072537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 67","termid":"PBO:0072537"}


id: GO:0035425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling between cells of the same type. The signal produced by the signaling cell binds to a receptor on, and affects a cell of the same type.","definition_xrefs":["ISBN:3527303782","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"autocrine signaling","synonyms":[{"name":"autocrine signalling","type":"exact"}],"termid":"GO:0035425"}


id: MONDO:0035823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHL7-related Bohring-Opitz-like syndrome","secondary_identifiers":["GARD:22436","MEDGEN:1842955","Orphanet:603689","UMLS:C5680210"],"synonyms":[{"name":"KLHL7-related BOS-like syndrome","type":"exact"}],"termid":"MONDO:0035823","xrefs":{"Monarch":{"xref_id":"0035823"}}}


id: PBO:0030342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_MCM_complex_assembly","termid":"PBO:0030342"}


id: FYPO:0007683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which components of the actin fusion focus are more widely distributed along the shmoo tip than normal.","definition_xrefs":["PMID:28410370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton","termid":"FYPO:0005665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0004803","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"wide actin fusion focus","synonyms":[{"name":"increased actin fusion focus diameter","type":"exact"},{"name":"increased actin fusion focus width","type":"exact"},{"name":"wider actin fusion focus","type":"exact"}],"termid":"FYPO:0007683"}


id: PBO:0047125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 168 member B","termid":"PBO:0047125"}


id: MOD:00227
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to omega-N-phospho-L-arginine.","definition_xrefs":["PubMed:8300603","RESID:AA0222","Unimod:21#R"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"N-phosphorylated residue","termid":"MOD:01456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"omega-N-phospho-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-(N'-phosphonocarbamimidamido)pentanoic acid","type":"exact"},{"name":"(2S)-2-amino-5-([amino(phosphonoamino)methylidene]amino)pentanoic acid","type":"exact"},{"name":"MOD_RES Phosphoarginine","type":"exact"},{"name":"N(gamma)-phosphoarginine","type":"exact"},{"name":"N(omega)-phosphono-L-arginine","type":"exact"},{"name":"N5-[imino(phosphonoamino)methyl]-L-ornithine","type":"exact"},{"name":"PArg","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phosphorylation","type":"related"},{"name":"alpha-amino-delta-phosphonoguanidinovaleric acid","type":"exact"},{"name":"omega-N-phospho-L-arginine","type":"exact"},{"name":"phosphoarginine","type":"exact"}],"termid":"MOD:00227"}


id: MONDO:0011218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete autosomal ichthyosis syndrome with prominent hair abnormalities (obsolete MONDO:0017271)","termid":"MONDO:0017271"},{"relation_name":"is_a","term_name":"autosomal recessive congenital ichthyosis","termid":"MONDO:0017265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"autosomal recessive congenital ichthyosis 11","secondary_identifiers":["UMLS:C1835851","MEDGEN:332073","OMIM:602400","Orphanet:91132","DOID:0060720","GARD:10116","MESH:C536273"],"synonyms":[{"name":"ARCI11","type":"related"},{"name":"ARIH","type":"related"},{"name":"IFAH syndrome","type":"exact"},{"name":"IHS","type":"exact"},{"name":"autosomal recessive congenital ichthyosis 11","type":"exact"},{"name":"autosomal recessive congenital ichthyosis type 11","type":"exact"},{"name":"autosomal recessive ichthyosis with hypotrichosis","type":"exact"},{"name":"hypotrichosis-congenital ichthyosis syndrome","type":"exact"},{"name":"ichthyosis and follicular atrophoderma with hypotrichosis and hypohidrosis","type":"exact"},{"name":"ichthyosis with hypotrichosis, autosomal recessive","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive 11","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive type 11","type":"exact"},{"name":"ichthyosis-follicular atrophoderma-hypotrichosis syndrome","type":"exact"},{"name":"ichthyosis-follicular atrophoderma-hypotrichosis-hypohidrosis syndrome","type":"exact"},{"name":"ichthyosis-hypotrichosis syndrome","type":"exact"}],"termid":"MONDO:0011218","xrefs":{"Monarch":{"xref_id":"0011218"}}}


id: PBO:0041633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C antisense RNA 3","termid":"PBO:0041633"}


id: PBO:0081021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C2HC-type containing 1C","termid":"PBO:0081021"}


id: MONDO:0020595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the retroperitoneal space.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete disorder of retroperitoneum (obsolete MONDO:0020595)","secondary_identifiers":["SCTID:734045002","NCIT:C27667"],"synonyms":[{"name":"disease of retroperitoneal space","type":"exact"},{"name":"disease or disorder of retroperitoneal space","type":"exact"},{"name":"disorder of retroperitoneal space","type":"exact"},{"name":"retroperitoneal disease","type":"exact"},{"name":"retroperitoneal disorder","type":"exact"},{"name":"retroperitoneal space disease","type":"exact"},{"name":"retroperitoneal space disease or disorder","type":"exact"}],"termid":"MONDO:0020595","xrefs":{"Monarch":{"xref_id":"0020595"}}}


id: GO:0006208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"},{"relation_name":"is_a","term_name":"nucleobase catabolic process","termid":"GO:0046113"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound catabolic process","termid":"GO:0072529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyrimidine nucleobase catabolic process","synonyms":[{"name":"pyrimidine base breakdown","type":"exact"},{"name":"pyrimidine base catabolic process","type":"exact"},{"name":"pyrimidine base catabolism","type":"exact"},{"name":"pyrimidine base degradation","type":"exact"}],"termid":"GO:0006208"}


id: PR:Q9Y7P7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.03c gene.","definition_xrefs":["UniProtKB:Q9Y7P7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C191.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.03c","synonyms":[{"name":"Spom972h-SPCC191.03c","type":"exact"}],"termid":"PR:Q9Y7P7"}


id: PBO:0063596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 11 alpha","termid":"PBO:0063596"}


id: MONDO:0019337
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008218"}]},"cv_name":"mondo","definition":"An autoimmune disease characterized by blisters on the skin.","direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune bullous skin disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:7231009","ICD9:694.9","GARD:19028","DOID:8502","EFO:0008598","UMLS:C5681494","ICD9:694.8","MEDGEN:1842418","Orphanet:79669"],"synonyms":[{"name":"bullous dermatosis","type":"related"},{"name":"bullous skin disease","type":"broad"}],"termid":"MONDO:0019337","terms_by_termid":{"MONDO:0008218":null},"xrefs":{"Monarch":{"xref_id":"0019337"}}}


id: GO:0034702
data:
  {"annotated_genes":["SJAG_00133","SJAG_03925","SJAG_00542","SJAG_00438","SJAG_04122","SJAG_05229","SJAG_MIT37","SJAG_MIT09","SJAG_07003","SJAG_05204","SJAG_MIT15","SJAG_00836","SJAG_00915","SJAG_02105","SJAG_00985","SJAG_02598","SJAG_02564","SJAG_03114"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[65280,108263,60068,64541,119462,116232,104020,57315,67174,119468,64038,57875,66851,67510,60533,119473,95180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045259"},{"annotations":[74816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"A protein complex that spans a membrane and forms a water-filled channel across the phospholipid bilayer allowing selective monoatomic ion transport down its electrochemical gradient.","definition_xrefs":["ISBN:071673706X","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"monoatomic ion channel complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"termid":"GO:0034702","terms_by_termid":{"GO:0005891":null,"GO:0045259":null}}


id: GO:0033469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving gibberellin 12, (1R,2S,3S,4R,8S,9S,12R)-4,8-dimethyl-13-methylidenetetracyclo[10.2.1.01,9.03,8]pentadecane-2,4-dicarboxylic acid 1meta,4a-dimethyl-8-methylidene-4aalpha,4bbeta-gibbane-1alpha,10beta-dicarboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellin metabolic process","termid":"GO:0009685"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"gibberellin 12 metabolic process","synonyms":[{"name":"GA12 metabolic process","type":"exact"},{"name":"gibberellin 12 metabolism","type":"exact"},{"name":"gibberellin A12 metabolic process","type":"exact"}],"termid":"GO:0033469"}


id: GO:0021946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deep nuclear neuron from the ventricular zone to the deep hindbrain nuclei.","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","GO_REF:0000021","GOC:jid","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deep nuclear neuron cell migration","termid":"GO:0021946"}


id: FYPO:0000014
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which the cell tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"tapered cell","synonyms":[{"name":"bottle-shaped cell","type":"exact"},{"name":"cell morphology, bottle/skittle","type":"exact"},{"name":"skittle-shaped cell","type":"exact"}],"termid":"FYPO:0000014"}


id: MONDO:0032832
data:
  {"annotated_genes":["SJAG_01053"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87278],"is_not":false,"summary":null,"term":"MONDO:0032832"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01053":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with nasal speech, dysmorphic facies, and variable skeletal anomalies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684881","UMLS:C5231426","OMIM:618608"],"synonyms":[{"name":"Chromosome 12Q15 Deletion Syndrome","type":"related"},{"name":"IDNADFS","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH NASAL SPEECH, DYSMORPHIC FACIES, AND VARIABLE SKELETAL ANOMALIES","type":"related"}],"termid":"MONDO:0032832","terms_by_termid":{"MONDO:0032832":null},"xrefs":{"Monarch":{"xref_id":"0032832"}}}


id: PR:Q9Y7U1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sfk1 gene.","definition_xrefs":["UniProtKB:Q9Y7U1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sfk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.01","synonyms":[{"name":"Spom972h-sfk1","type":"exact"}],"termid":"PR:Q9Y7U1"}


id: PBO:0080973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 8 opposite strand pseudogene 2","termid":"PBO:0080973"}


id: GO:0072079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a nephron tubule from unspecified parts. A nephron tubule is an epithelial tube that is part of the nephron, the functional part of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic epithelial tube formation","termid":"GO:0001838"},{"relation_name":"part_of","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron tubule formation","termid":"GO:0072079"}


id: PBO:0016587
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase Two C","termid":"PBO:0016587"}


id: PBO:0040967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 38","termid":"PBO:0040967"}


id: MONDO:1010800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"brachydactyly, non-human animal","termid":"MONDO:1010156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly, chicken","secondary_identifiers":["OMIA:000146-9031"],"termid":"MONDO:1010800","xrefs":{"Monarch":{"xref_id":"1010800"}}}


id: PBO:0005542
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.7","termid":"PBO:0005542"}


id: GO:0035739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a CD4-positive, alpha-beta T cell population by cell division.","definition_xrefs":["GOC:BHF","CL:0000624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell activation","termid":"GO:0035710"},{"relation_name":"is_a","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell proliferation","termid":"GO:0035739"}


id: PR:G2TRQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC32H8.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRQ1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C32H8.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.15","synonyms":[{"name":"Spom972h-SPBC32H8.15","type":"exact"}],"termid":"PR:G2TRQ1"}


id: GO:1902166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator.","definition_xrefs":["GOC:TermGenie","PMID:17719541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:1902165"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage","termid":"GO:1902230"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902254"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","termid":"GO:0042771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","synonyms":[{"name":"down regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"down-regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"downregulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"exact"},{"name":"inhibition of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator","type":"narrow"},{"name":"negative regulation of DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902166"}


id: PBO:0068214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 521","termid":"PBO:0068214"}


id: PBO:0069347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 607, pseudogene","termid":"PBO:0069347"}


id: PBO:0030770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_at_centromere_outer_repeat","termid":"PBO:0030770"}


id: FYPO:0002509
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification","termid":"FYPO:0002499"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation","termid":"FYPO:0002503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"increased protein palmitoylation","termid":"FYPO:0002509"}


id: GO:0033866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleoside bisphosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with one phosphate group attached to each of two different hydroxyl groups on the sugar.","definition_xrefs":["GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside bisphosphate metabolic process","termid":"GO:0033865"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nucleoside bisphosphate biosynthetic process","synonyms":[{"name":"nucleoside bisphosphate anabolism","type":"exact"},{"name":"nucleoside bisphosphate biosynthesis","type":"exact"},{"name":"nucleoside bisphosphate formation","type":"exact"},{"name":"nucleoside bisphosphatehate synthesis","type":"exact"}],"termid":"GO:0033866"}


id: GO:0035130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the pectoral fin are generated and organized. Pectoral fins are bilaterally paired fins mounted laterally and located behind the gill covers of fish. These fins are used for lateral mobility and propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"is_a","term_name":"pectoral fin morphogenesis","termid":"GO:0035138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic pectoral fin morphogenesis","termid":"GO:0035130"}


id: MONDO:0014855
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85970],"is_not":false,"summary":null,"term":"MONDO:0014855"}]},"cv_name":"mondo","definition":"Any autosomal dominant intellectual disability in which the cause of the disease is a heterozygous mutation in the GNB1 gene. It is characterized by global developmental delay, intellectual disability, hypotonia, structural brain abnormalities, and seizures. Other less common findings include dystonia, visual impairment, behavior problems, growth delay, craniofacial defects, and genitourinary abnormalities in males.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"excluded_subClassOf","term_name":"obsolete global developmental delay-neuro-ophthalmological abnormalities-seizures-intellectual disability syndrome (obsolete MONDO:0024252)","termid":"MONDO:0024252"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 42","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616973","MEDGEN:934741","DOID:0070072","GARD:18501","Orphanet:488613","UMLS:C4310774"],"synonyms":[{"name":"GNB1 autosomal dominant non-syndromic intellectual disability","type":"narrow"},{"name":"GNB1-related disorder","type":"exact"},{"name":"GNB1-related neurodevelopmental disorder","type":"exact"},{"name":"MRD42","type":"exact"},{"name":"autosomal dominant intellectual disability 42","type":"exact"},{"name":"autosomal dominant mental retardation 42","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 42","type":"narrow"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in GNB1","type":"narrow"},{"name":"global developmental delay-neuro-ophthalmological abnormalities-seizures-intellectual disability syndrome","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 42","type":"exact"},{"name":"intellectual disability, autosomal dominant 42","type":"exact"},{"name":"intellectual disability, autosomal dominant type 42","type":"exact"},{"name":"mental retardation, autosomal dominant 42","type":"exact"},{"name":"mental retardation, autosomal dominant type 42","type":"exact"}],"termid":"MONDO:0014855","terms_by_termid":{"MONDO:0014855":null},"xrefs":{"Monarch":{"xref_id":"0014855"}}}


id: PBO:0012062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of Ofd1, Nro1","termid":"PBO:0012062"}


id: MONDO:1011188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scoliosis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scoliosis, non-human animal","termid":"MONDO:1010302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scoliosis, horse","secondary_identifiers":["OMIA:000891-9796"],"termid":"MONDO:1011188","xrefs":{"Monarch":{"xref_id":"1011188"}}}


id: GO:0045779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of bone resorption.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bone resorption","termid":"GO:0045124"},{"relation_name":"is_a","term_name":"negative regulation of bone remodeling","termid":"GO:0046851"},{"relation_name":"negatively_regulates","term_name":"bone resorption","termid":"GO:0045453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone resorption","synonyms":[{"name":"down regulation of bone resorption","type":"exact"},{"name":"down-regulation of bone resorption","type":"exact"},{"name":"downregulation of bone resorption","type":"exact"},{"name":"inhibition of bone resorption","type":"narrow"}],"termid":"GO:0045779"}


id: PBO:0090818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps60","termid":"PBO:0090818"}


id: MONDO:0006892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent focal onset seizures which have sensory (i.e., olfactory, visual, tactile, gustatory, or auditory) manifestations. Partial seizures that feature alterations of consciousness are referred to as complex partial seizures (epilepsy, complex partial).","definition_xrefs":["MESH:D020937"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal epilepsy","termid":"MONDO:0005384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"partial sensory epilepsy","secondary_identifiers":["MEDGEN:107460","DOID:3330","UMLS:C0544645"],"termid":"MONDO:0006892","xrefs":{"Monarch":{"xref_id":"0006892"}}}


id: MONDO:0015452
data:
  {"annotated_genes":["SJAG_00739","SJAG_04755","SJAG_03576","SJAG_04213","SJAG_05313","SJAG_01111","SJAG_02254","SJAG_02447","SJAG_02589"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007617"},{"annotations":[87034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032912"},{"annotations":[85953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014838"},{"annotations":[86440,86439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032702"},{"annotations":[86614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013819"},{"annotations":[86615,86616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013820"},{"annotations":[86617,86618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013821"}]},"cv_name":"mondo","definition":"Coffin-Siris syndrome (CSS) is a rare congenital multi-systemic genetic disorder characterized by aplasia or hypoplasia of the distal phalanx or nail of the fifth digit, developmental delay, intellectual disability, coarse facial features, and other variable clinical manifestations.","definition_xrefs":["Orphanet:1465"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00739":null,"SJAG_01111":null,"SJAG_02254":null,"SJAG_02447":null,"SJAG_02589":null,"SJAG_03576":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"is_obsolete":false,"name":"Coffin-Siris syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:6124","MEDGEN:75565","MESH:C536436","NCIT:C35321","OMIMPS:135900","DOID:1925","NANDO:2200977","SCTID:10007009","icd11.foundation:734451870","ICD9:759.89","UMLS:C0265338","NANDO:1200670","NORD:984"],"synonyms":[{"name":"CSS","type":"exact"},{"name":"Coffin-Siris syndrome","type":"exact"},{"name":"dwarfism-onychodysplasia","type":"exact"},{"name":"fifth digit syndrome","type":"exact"},{"name":"intellectual disability with absent fifth fingernail and terminal phalanx","type":"related"},{"name":"short stature-onychodysplasia.","type":"exact"}],"termid":"MONDO:0015452","terms_by_termid":{"MONDO:0007617":null,"MONDO:0013819":null,"MONDO:0013820":null,"MONDO:0013821":null,"MONDO:0014838":null,"MONDO:0032702":null,"MONDO:0032912":null},"xrefs":{"Monarch":{"xref_id":"0015452"}}}


id: PomGeneEx:0000019
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A gene expression qualifier that indicates that a protein is present at a lower level under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased","termid":"PomGeneEx:0000003"},{"relation_name":"is_a","term_name":"protein expression level","termid":"PomGeneEx:0000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein level decreased","synonyms":[{"name":"decreased protein level","type":"exact"},{"name":"protein expression decreased","type":"exact"}],"termid":"PomGeneEx:0000019"}


id: PR:O59675
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps902 gene.","definition_xrefs":["UniProtKB:O59675","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S9-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.12","synonyms":[{"name":"Spom972h-rps902","type":"exact"}],"termid":"PR:O59675"}


id: PBO:0059868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 6","termid":"PBO:0059868"}


id: RO:HOM0000005
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homoplasy that involves homologous underlying mechanisms or structures.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homoplasy_relationship_with","termid":"RO:HOM0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_parallelism_relationship_with","synonyms":[{"name":"parallel evolution","type":"exact"}],"termid":"RO:HOM0000005"}


id: PR:Q10368
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22E12.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22E12.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.18","synonyms":[{"name":"Spom972h-SPAC22E12.18","type":"exact"}],"termid":"PR:Q10368"}


id: PBO:0087646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex; complex is heme-activated and glucose-repressed; complex is a transcriptional activator and global regulator of respiratory gene expression; contains sequences contributing to both complex assembly and DNA binding","termid":"PBO:0087646"}


id: PBO:0027089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_mitosis","termid":"PBO:0027089"}


id: MOD:01513
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins that are nominally equal (sometimes called isobaric) at a resolution below 0.1 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by isobaric sets","termid":"MOD:00538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.1 Da","termid":"MOD:01513"}


id: MONDO:0971173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammation with arthritis and vasculitis","secondary_identifiers":["OMIM:620880","MEDGEN:1855512","UMLS:C5935634"],"termid":"MONDO:0971173","xrefs":{"Monarch":{"xref_id":"0971173"}}}


id: PBO:0043534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 2","termid":"PBO:0043534"}


id: PBO:0074254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 1B7 (putative)","termid":"PBO:0074254"}


id: GO:1903461
data:
  {"annotated_genes":["SJAG_00618","SJAG_05232","SJAG_00198","SJAG_02690","SJAG_02199","SJAG_04183","SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72648,92983,95394,100952,100986,101844,104496],"is_not":false,"summary":null,"term":"GO:1903461"}]},"cv_name":"biological_process","definition":"Any DNA replication, Okazaki fragment processing that is involved in mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","GOC:mtg_cell_cycle","PMID:1234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication, Okazaki fragment processing","termid":"GO:0033567"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00618":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_04183":null,"SJAG_05232":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"Okazaki fragment processing involved in mitotic DNA replication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication, Okazaki fragment processing involved in DNA replication during S phase involved in mitotic cell cycle","type":"related"},{"name":"DNA replication, Okazaki fragment processing involved in DNA replication involved in S phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA replication, Okazaki fragment processing involved in DNA replication involved in S-phase involved in mitotic cell cycle","type":"exact"},{"name":"DNA replication, Okazaki fragment processing involved in mitotic nuclear cell cycle DNA replication","type":"exact"},{"name":"DNA replication, Okazaki fragment processing involved in nuclear cell cycle DNA replication involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903461","terms_by_termid":{"GO:1903461":null}}


id: GO:0070006
data:
  {"annotated_genes":["SJAG_00969","SJAG_01088","SJAG_06636","SJAG_00181","SJAG_02033","SJAG_01896","SJAG_03744","SJAG_03022"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57843,60284,63848,64807,73050,74784,98174,114838],"is_not":false,"summary":null,"term":"GO:0070006"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single N-terminal amino acid residue from a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.","direct_ancestors":[{"relation_name":"is_a","term_name":"aminopeptidase activity","termid":"GO:0004177"},{"relation_name":"is_a","term_name":"metalloexopeptidase activity","termid":"GO:0008235"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00969":null,"SJAG_01088":null,"SJAG_01896":null,"SJAG_02033":null,"SJAG_03022":null,"SJAG_03744":null,"SJAG_06636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0008233","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"metalloaminopeptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070006","terms_by_termid":{"GO:0070006":null}}


id: GO:0042540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin; especially, the proteolytic cleavage of hemoglobin to yield free heme, peptides, and amino acids.","definition_xrefs":["GOC:jl","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemoglobin metabolic process","termid":"GO:0020027"},{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"hemoglobin catabolic process","secondary_identifiers":["GO:0020029"],"synonyms":[{"name":"haemoglobin catabolic process","type":"exact"},{"name":"haemoglobin catabolism","type":"exact"},{"name":"haemoglobin hydrolysis","type":"narrow"},{"name":"hemoglobin breakdown","type":"exact"},{"name":"hemoglobin catabolism","type":"exact"},{"name":"hemoglobin degradation","type":"exact"},{"name":"hemoglobin hydrolysis","type":"narrow"}],"termid":"GO:0042540"}


id: MONDO:0016996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Natural killer (NK)-cell enteropathy is a benign NK-cell lymphoproliferative disease characterized by minor abdominal symptoms (abdominal pain, diverticulosis, constipation and reflux) due to NK cell-derived lesions in the mucosal layer of the gastrointestinal tract and often mistaken for NK or T-cell lymphoma.","definition_xrefs":["Orphanet:263665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"NK-cell enteropathy","secondary_identifiers":["UMLS:C4509932","GARD:20905","SCTID:723496007","MEDGEN:1379183"],"termid":"MONDO:0016996","xrefs":{"Monarch":{"xref_id":"0016996"}}}


id: MONDO:0009299
data:
  {"annotated_genes":["SJAG_03051","SJAG_04950","SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[85971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[86729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"}]},"cv_name":"mondo","definition":"46,XX gonadal dysgenesis (46,XX GD) is a primary ovarian defect leading to premature ovarian failure (POF) in otherwise normal 46,XX females as a result of failure of the gonads to develop or due to resistance to gonadotrophin stimulation.","definition_xrefs":["Orphanet:243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03051":null,"SJAG_04148":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"46 XX gonadal dysgenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200384","icd11.foundation:1742528605","OMIMPS:233300","NCIT:C120197","SCTID:95198001","GARD:5671","UMLS:C0685837","MESH:D023961","DOID:14450","MEDGEN:146899"],"synonyms":[{"name":"46,XX complete gonadal dysgenesis","type":"exact"},{"name":"46,XX gonadal dysgenesis","type":"exact"},{"name":"46,XX ovarian dysgenesis","type":"exact"},{"name":"46,XX pure gonadal dysgenesis","type":"exact"},{"name":"FSH-RO","type":"exact"},{"name":"XX female gonadal dysgenesis","type":"exact"},{"name":"XX gonadal dysgenesis","type":"related"},{"name":"XX-GD","type":"exact"},{"name":"follicular stimulating hormone-resistant ovaries","type":"exact"},{"name":"hypergonadotropic ovarian dysgenesis","type":"exact"},{"name":"ovarian dysgenesis","type":"related"}],"termid":"MONDO:0009299","terms_by_termid":{"MONDO:0013689":null,"MONDO:0030736":null,"MONDO:0054850":null},"xrefs":{"Monarch":{"xref_id":"0009299"}}}


id: PBO:0072243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 18","termid":"PBO:0072243"}


id: PBO:0048964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein A33","termid":"PBO:0048964"}


id: FYPO:0002846
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and small vegetative cells. The spheroid cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and small cells (obsolete FYPO:0002846)","termid":"FYPO:0002846"}


id: MONDO:0044098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal pregnancy in which the conception is implanted on the ovary.","definition_xrefs":["NCIT:C92945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectopic pregnancy","termid":"MONDO:0000755"},{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian ectopic pregnancy","secondary_identifiers":["MESH:D065172","SCTID:9899009","MEDGEN:46073","UMLS:C0032991"],"synonyms":[{"name":"Pregnancies, ovarian","type":"related"},{"name":"ectopic pregnancy of ovary","type":"exact"},{"name":"ovarian Pregnancies","type":"related"},{"name":"ovarian pregnancy","type":"exact"},{"name":"ovary ectopic pregnancy","type":"exact"}],"termid":"MONDO:0044098","xrefs":{"Monarch":{"xref_id":"0044098"}}}


id: PBO:0110570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase, Jmjc domain Epe1","termid":"PBO:0110570"}


id: PBO:0036228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene, malic enzyme with 2 frameshifts","termid":"PBO:0036228"}


id: PBO:0054613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2018","termid":"PBO:0054613"}


id: GO:0001402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Relaying of environmental signals promoting filamentous growth.","definition_xrefs":["GOC:mcc","PMID:9728395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"signal transduction involved in filamentous growth","synonyms":[{"name":"MAPKKK cascade (pseudohyphal growth)","type":"related"},{"name":"signal transduction during filamentous growth","type":"related"}],"termid":"GO:0001402"}


id: PBO:0080845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 9","termid":"PBO:0080845"}


id: PBO:0060132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 33","termid":"PBO:0060132"}


id: PBO:0077144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidine kinase 1","termid":"PBO:0077144"}


id: MONDO:0957928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 11","secondary_identifiers":["DOID:0060928","MEDGEN:1846918","UMLS:C5882715","OMIM:620576"],"termid":"MONDO:0957928","xrefs":{"Monarch":{"xref_id":"0957928"}}}


id: PBO:0117098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB27B antisense RNA 1","termid":"PBO:0117098"}


id: MONDO:1011116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cryptorchidism that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cryptorchidism, non-human animal","termid":"MONDO:1010275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptorchidism, goat","secondary_identifiers":["OMIA:000243-9925"],"termid":"MONDO:1011116","xrefs":{"Monarch":{"xref_id":"1011116"}}}


id: GO:0016607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.","definition_xrefs":["PMID:28977640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ribonucleoprotein granule","termid":"GO:0140168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"nuclear speck","synonyms":[{"name":"nuclear speckle","type":"exact"},{"name":"nuclear speckles","type":"exact"},{"name":"speckle domain","type":"narrow"},{"name":"speckle focus","type":"related"},{"name":"splicing speckle","type":"exact"}],"termid":"GO:0016607"}


id: GO:0006884
data:
  {"annotated_genes":["SJAG_02019","SJAG_03401","SJAG_02532","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73825,96013,114306],"is_not":false,"summary":null,"term":"GO:0006884"},{"annotations":[92733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009992"}]},"cv_name":"biological_process","definition":"Any process involved in maintaining the steady state of a cell's volume. The cell's volume refers to the three-dimensional space occupied by a cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell size","termid":"GO:0008361"},{"relation_name":"is_a","term_name":"cellular homeostasis","termid":"GO:0019725"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02019":null,"SJAG_02532":null,"SJAG_03401":null,"SJAG_04668":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell volume homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell volume","type":"exact"}],"termid":"GO:0006884","terms_by_termid":{"GO:0006884":null,"GO:0009992":null}}


id: PBO:0072404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 9","termid":"PBO:0072404"}


id: GO:0060333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interferon-gamma binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Interferon gamma is the only member of the type II interferon found so far.","definition_xrefs":["PMID:28901902","GOC:add","GOC:dph","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon-mediated signaling pathway","termid":"GO:0140888"},{"relation_name":"part_of","term_name":"cellular response to type II interferon","termid":"GO:0071346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"type II interferon-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-877300"],"synonyms":[{"name":"gamma-interferon-mediated signaling pathway","type":"exact"},{"name":"immune interferon signaling pathway","type":"exact"},{"name":"interferon-gamma-mediated signaling pathway","type":"exact"},{"name":"interferon-gamma-mediated signalling pathway","type":"exact"},{"name":"type II IFN-mediated signaling pathway","type":"exact"}],"termid":"GO:0060333"}


id: PR:O14208
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bit2 gene.","definition_xrefs":["UniProtKB:O14208","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6B12.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.03c","synonyms":[{"name":"Spom972h-bit2","type":"exact"}],"termid":"PR:O14208"}


id: PBO:0059533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Glu (GAA/G)","termid":"PBO:0059533"}


id: PR:O13858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sle1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome protein sle1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.07","synonyms":[{"name":"SEG1-like eisosome protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sle1","type":"exact"}],"termid":"PR:O13858"}


id: GO:0048663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a neuron.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron fate commitment","secondary_identifiers":["GO:0042055"],"synonyms":[{"name":"neuron lineage restriction","type":"exact"},{"name":"neuronal lineage restriction","type":"exact"}],"termid":"GO:0048663"}


id: PBO:0069254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 509, pseudogene","termid":"PBO:0069254"}


id: PBO:0028583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_vegetative_growth","termid":"PBO:0028583"}


id: GO:0089720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a caspase family protein.","definition_xrefs":["GOC:dos","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protease binding","termid":"GO:0002020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"caspase binding","termid":"GO:0089720"}


id: PBO:0080088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 49","termid":"PBO:0080088"}


id: PBO:0066357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REST corepressor 1","termid":"PBO:0066357"}


id: PBO:0075918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 10","termid":"PBO:0075918"}


id: PBO:0001908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLASP family microtubule-associated protein","termid":"PBO:0001908"}


id: GO:0018289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of molybdenum into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal incorporation into metallo-sulfur cluster","termid":"GO:0018282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"molybdenum incorporation into metallo-sulfur cluster","synonyms":[{"name":"molybdenum incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018289"}


id: PBO:0086363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aldose 1-epimerase","termid":"PBO:0086363"}


id: MONDO:0013244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any brachydactyly type E in which the cause of the disease is a mutation in the PTHLH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly type E","termid":"MONDO:0019677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type E2","secondary_identifiers":["MEDGEN:461994","UMLS:C3150644","GARD:15654","DOID:0110976","OMIM:613382"],"synonyms":[{"name":"BDE2","type":"exact"},{"name":"PTHLH brachydactyly type E","type":"exact"},{"name":"brachydactyly type E caused by mutation in PTHLH","type":"exact"},{"name":"brachydactyly type E2","type":"exact"},{"name":"brachydactyly, type E2","type":"related"}],"termid":"MONDO:0013244","xrefs":{"Monarch":{"xref_id":"0013244"}}}


id: PBO:0038884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 10","termid":"PBO:0038884"}


id: PBO:0029915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_FPP_level","termid":"PBO:0029915"}


id: PBO:0074882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 61","termid":"PBO:0074882"}


id: MONDO:0010326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the ARHGEF6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 46","secondary_identifiers":["MEDGEN:337255","MESH:C564513","OMIM:300436","UMLS:C1845526","DOID:0112055","GARD:22677"],"synonyms":[{"name":"ARHGEF6 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"MRX46","type":"related"},{"name":"intellectual disability, X-linked 46","type":"exact"},{"name":"intellectual disability, X-linked type 46","type":"exact"},{"name":"mental retardation, X-linked 46","type":"related"},{"name":"mental retardation, X-linked 46, X-linked recessive","type":"exact"},{"name":"mental retardation, X-linked type 46","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in ARHGEF6","type":"exact"}],"termid":"MONDO:0010326","xrefs":{"Monarch":{"xref_id":"0010326"}}}


id: PBO:0078589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 2, Y-linked","termid":"PBO:0078589"}


id: PBO:0075625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRING1 pseudogene 2","termid":"PBO:0075625"}


id: PBO:0082549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central component of GID Complex, involved in FBPase degradation; interacts strongly with Gid8p to serve as a scaffold for other GID Complex subunits; contains SPRY domain and 3 domains that are also found in Gid8p - LisH, CTLH, and CRA; required for association of Vid vesicles and actin patches in vacuole import and degradation pathway; shifts the balance of nitrogen metabolism toward glutamate production; localizes to the nucleus and the cytoplasm","termid":"PBO:0082549"}


id: GO:0160197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a di-trans,poly-cis-dolichal+ H+ + NAD(P)+ = a di-trans,poly-cis-dolichal + NAD(P)H.","definition_xrefs":["PMID:38821050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dolichal reductase [NAD(P)H] activity","synonyms":[{"name":"dolichal reductase [NAD(P)+] activity","type":"exact"}],"termid":"GO:0160197"}


id: MONDO:0022755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"monosomy","termid":"MONDO:0020639"},{"relation_name":"is_a","term_name":"chromosome 18 disorder","termid":"MONDO:0700125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 mosaic monosomy","secondary_identifiers":["UMLS:C2931250","MESH:C536581","MEDGEN:419755"],"synonyms":[{"name":"Mosaic monosomy 18","type":"related"},{"name":"Mosaic monosomy chromosome 18","type":"related"},{"name":"monosomy 18 mosaicism","type":"related"}],"termid":"MONDO:0022755","xrefs":{"Monarch":{"xref_id":"0022755"}}}


id: PBO:0053789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1040","termid":"PBO:0053789"}


id: PBO:0088800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein, involved in chromatin remodeling","termid":"PBO:0088800"}


id: GO:0016058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of the excited state of a photoreceptor cell to produce a steady-state current as a result of signals generated by rhodopsin activation by a photon.","definition_xrefs":["GOC:hb","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential in photoreceptor cell","termid":"GO:0016057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of membrane potential in photoreceptor cell by rhodopsin mediated signaling","synonyms":[{"name":"maintenance of rhodopsin mediated signaling","type":"related"},{"name":"maintenance of rhodopsin mediated signalling","type":"exact"}],"termid":"GO:0016058"}


id: MONDO:0023041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ectodermal dysplasia Berlin type (obsolete MONDO:0023041)","termid":"MONDO:0023041","xrefs":{"Monarch":{"xref_id":"0023041"}}}


id: GO:0019162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxaloacetate + pyridoxamine = L-aspartate + pyridoxal.","definition_xrefs":["EC:2.6.1.31","RHEA:10844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"pyridoxamine-oxaloacetate transaminase activity","secondary_identifiers":["KEGG_REACTION:R01713","MetaCyc:PYROXALTRANSAM-RXN"],"synonyms":[{"name":"pyridoxamine--oxaloacetate aminotransferase activity","type":"related"},{"name":"pyridoxamine-oxaloacetate aminotransferase activity","type":"exact"},{"name":"pyridoxamine:oxaloacetate aminotransferase activity","type":"related"}],"termid":"GO:0019162"}


id: GO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Increase in abundance of circular DNA molecules in dividing cells as they age. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats, and then replicated independently of chromosomal replication.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete extrachromosomal circular DNA accumulation involved in replicative cell aging (obsolete GO:0001307)","synonyms":[{"name":"extrachromosomal circular DNA accumulation during replicative cell ageing","type":"related"},{"name":"extrachromosomal circular DNA accumulation during replicative cell aging","type":"related"}],"termid":"GO:0001307"}


id: PBO:0080662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 8","termid":"PBO:0080662"}


id: PBO:0054575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1977","termid":"PBO:0054575"}


id: PBO:0111837
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HP1/CBX family","termid":"PBO:0111837"}


id: PBO:0065001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 7","termid":"PBO:0065001"}


id: MOD:01870
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification reporter fragment produced by an Applied Biosystems mTRAQ reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mTRAQ reporter fragment","termid":"MOD:01870"}


id: MONDO:0031421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary palmoplantar keratoderma characterized by the combination of bilateral mutilating transgredient palmoplantar keratoderma and periorificial keratotic plaques.","definition_xrefs":["Orphanet:659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary palmoplantar keratoderma","termid":"MONDO:0019272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Olmsted syndrome","secondary_identifiers":["MEDGEN:590661","UMLS:C0406761","GARD:4075","DOID:0112011","OMIMPS:614594","MedDRA:10068842"],"synonyms":[{"name":"mutilating palmoplantar hyperkeratosis with periorificial keratotic plaques","type":"exact"},{"name":"palmoplantar and periorificial keratoderma","type":"exact"},{"name":"palmoplantar keratoderma, mutilating, with periorificial keratotic plaques","type":"exact"}],"termid":"MONDO:0031421","xrefs":{"Monarch":{"xref_id":"0031421"}}}


id: GO:0018768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,4E)-6-(2-aminophenyl)-2-hydroxy-6-oxohexa-2,4-dienoate + H2O = (2E)-2-hydroxypenta-2,4-dienoate + anthranilate + H+.","definition_xrefs":["RHEA:27870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-6-oxo-6-(2'-aminophenyl)hexa-2,4-dienoate hydrolase activity","secondary_identifiers":["EC:3.7.1.13","UM-BBD_reactionID:r0458","MetaCyc:RXN-11543"],"termid":"GO:0018768"}


id: MOD:01295
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to monosodium L-aspartate.","definition_xrefs":["Unimod:30#D","PubMed:12216740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosodium salt","termid":"MOD:00423"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosodium L-aspartate","synonyms":[{"name":"Cation:Na","type":"related"},{"name":"Na1Asp","type":"exact"},{"name":"Sodium adduct","type":"related"}],"termid":"MOD:01295"}


id: PBO:0074210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 41 member 3","termid":"PBO:0074210"}


id: GO:0051667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a plastid to a specific location in the cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid localization","termid":"GO:0051644"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of plastid localization","synonyms":[{"name":"establishment of plastid localisation","type":"exact"}],"termid":"GO:0051667"}


id: PBO:0036194
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_elongation_without_chromosome_separation","termid":"PBO:0036194"}


id: MONDO:0006021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome typically consisting of angina (cardiac chest pain) at rest that occurs in cycles. It is caused by vasospasm, a narrowing of the coronary arteries caused by contraction of the smooth muscle tissue in the vessel walls rather than directly by atherosclerosis (buildup of fatty plaque and hardening of the arteries). For a portion of patients Prinzmetal's angina may be a manifestation of vasospastic disorder and is associated with migraine, Raynaud's phenomenon or aspirin-induced asthma.","definition_xrefs":["Wikipedia:Prinzmetal%27s_angina"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary vasospasm","termid":"MONDO:0005356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Prinzmetal angina","secondary_identifiers":["SCTID:87343002","DOID:0111151","ICD9:413.1","MEDGEN:295","UMLS:C0002963","EFO:1000013","MESH:D000788","Wikipedia:Prinzmetal's_angina"],"synonyms":[{"name":"Prinzmetal's angina","type":"exact"},{"name":"Prinzmetal's variant angina","type":"exact"},{"name":"angina inversa","type":"exact"},{"name":"variant angina","type":"exact"},{"name":"variant angina pectoris","type":"exact"}],"termid":"MONDO:0006021","xrefs":{"Monarch":{"xref_id":"0006021"}}}


id: PBO:0078222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 10-3","termid":"PBO:0078222"}


id: MONDO:0021465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the vermiform appendix.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendiceal neoplasm","termid":"MONDO:0001236"},{"relation_name":"is_a","term_name":"benign neoplasm of cecum","termid":"MONDO:0021464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of appendix","secondary_identifiers":["SCTID:91981009","UMLS:C0496860","MEDGEN:99221","ICD10CM:D12.1","icd11.foundation:7146014","NCIT:C4773"],"synonyms":[{"name":"benign appendix neoplasm","type":"exact"},{"name":"benign appendix tumor","type":"exact"},{"name":"benign appendix tumour","type":"exact"},{"name":"benign neoplasm of the appendix","type":"exact"},{"name":"benign tumor of appendix","type":"exact"},{"name":"benign tumor of the appendix","type":"exact"},{"name":"benign tumour of appendix","type":"exact"},{"name":"benign tumour of the appendix","type":"exact"},{"name":"vermiform appendix benign neoplasm","type":"exact"}],"termid":"MONDO:0021465","xrefs":{"Monarch":{"xref_id":"0021465"}}}


id: GO:0050980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in magnetoception in which a light stimulus is received and converted into a molecular signal. Downstream processing of the light information in addition to other sensory data allows organisms to perceive the orientation of a magnetic field.","definition_xrefs":["Wikipedia:Magnetoception","GOC:ai","GOC:dos","PMID:15886990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of light stimulus involved in sensory perception","termid":"GO:0050962"},{"relation_name":"part_of","term_name":"magnetoreception","termid":"GO:0050958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of light stimulus involved in magnetoreception","synonyms":[{"name":"magnetoreception, detection of light stimulus","type":"exact"},{"name":"magnetoreception, sensory detection of light stimulus","type":"exact"},{"name":"magnetoreception, sensory transduction of light stimulus","type":"exact"},{"name":"sensory detection of light stimulus during magnetoreception","type":"exact"},{"name":"sensory transduction of light stimulus during magnetoreception","type":"exact"}],"termid":"GO:0050980"}


id: FYPO:0001969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is increased when cells are grown in medium containing papulacandin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased 1,3-beta-D-glucan synthase activity during growth on papulacandin B","termid":"FYPO:0001969"}


id: GO:0060451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of muscle contraction of the hindgut, the posterior part of the alimentary canal, including the rectum, and the large intestine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hindgut contraction","termid":"GO:0043134"},{"relation_name":"is_a","term_name":"negative regulation of smooth muscle contraction","termid":"GO:0045986"},{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"negatively_regulates","term_name":"hindgut contraction","termid":"GO:0043133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hindgut contraction","termid":"GO:0060451"}


id: PBO:0047644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase family member 1C","termid":"PBO:0047644"}


id: PBO:0046112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E family member 3","termid":"PBO:0046112"}


id: PBO:0044589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBT pseudogene 1","termid":"PBO:0044589"}


id: PBO:0048356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 67","termid":"PBO:0048356"}


id: GO:1900758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of D-amino-acid oxidase activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of D-amino-acid oxidase activity (obsolete GO:1900758)","synonyms":[{"name":"down regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"down regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"down regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"down regulation of new yellow enzyme","type":"related"},{"name":"down-regulation of D-amino-acid oxidase activity","type":"exact"},{"name":"down-regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"down-regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"down-regulation of new yellow enzyme","type":"related"},{"name":"downregulation of D-amino-acid oxidase activity","type":"exact"},{"name":"downregulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"downregulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"downregulation of new yellow enzyme","type":"related"},{"name":"inhibition of D-amino-acid oxidase activity","type":"narrow"},{"name":"inhibition of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"inhibition of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"inhibition of new yellow enzyme","type":"related"},{"name":"negative regulation of D-amino-acid:oxygen oxidoreductase (deaminating)","type":"exact"},{"name":"negative regulation of L-amino acid:O2 oxidoreductase activity","type":"exact"},{"name":"negative regulation of new yellow enzyme","type":"related"}],"termid":"GO:1900758"}


id: GO:0046037
data:
  {"annotated_genes":["SJAG_04849","SJAG_04634","SJAG_01298","SJAG_00964","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64527],"is_not":false,"summary":null,"term":"GO:0046037"},{"annotations":[59525,63169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[75993,101533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving GMP, guanosine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00964":null,"SJAG_01298":null,"SJAG_04634":null,"SJAG_04849":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"GMP metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"GMP metabolism","type":"exact"}],"termid":"GO:0046037","terms_by_termid":{"GO:0006177":null,"GO:0032263":null,"GO:0046037":null}}


id: MONDO:0014619
data:
  {"annotated_genes":["SJAG_01207"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85629],"is_not":false,"summary":null,"term":"MONDO:0014619"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitive trichothiodystrophy","termid":"MONDO:0002470"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021190","MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy 3, photosensitive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C173099","MEDGEN:865608","OMIM:616395","GARD:16102","UMLS:C4017171","DOID:0111871"],"synonyms":[{"name":"TTD3","type":"related"},{"name":"trichothiodystrophy 3, photosensitive","type":"exact"},{"name":"trichothiodystrophy, complementation group A","type":"related"}],"termid":"MONDO:0014619","terms_by_termid":{"MONDO:0014619":null},"xrefs":{"Monarch":{"xref_id":"0014619"}}}


id: GO:0061007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A system process carried out by any of the organs or tissues of the hepaticobiliary system. The hepaticobiliary system is responsible for metabolic and catabolic processing of small molecules absorbed from the blood or gut, hormones and serum proteins, detoxification, storage of glycogen, triglycerides, metals and lipid soluble vitamins and excretion of bile. Included are the synthesis of albumin, blood coagulation factors, complement, and specific binding proteins.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepaticobiliary system process","synonyms":[{"name":"hepatobiliary system process","type":"exact"}],"termid":"GO:0061007"}


id: FYPO:0006157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of oxidation of one or more specific proteins, or of specific protein sites is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of protein oxidation during vegetative growth","synonyms":[{"name":"increased duration of protein oxidation during mitotic cell cycle","type":"related"},{"name":"prolonged protein oxidation during vegetative growth","type":"exact"}],"termid":"FYPO:0006157"}


id: PATO:0002348
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer resembling wood.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/ligneous"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligneous","termid":"PATO:0002348"}


id: PBO:0059710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 18","termid":"PBO:0059710"}


id: MONDO:0957003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary neuro-ophthalmological disease","secondary_identifiers":["Orphanet:183616","MEDGEN:1842469","UMLS:C5680540","GARD:20309"],"synonyms":[{"name":"genetic neuro-ophthalmological disease","type":"exact"}],"termid":"MONDO:0957003","xrefs":{"Monarch":{"xref_id":"0957003"}}}


id: PBO:0079206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressing subtransferable candidate 2 (pseudogene)","termid":"PBO:0079206"}


id: PBO:0065390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein serine kinase H2","termid":"PBO:0065390"}


id: PATO:0002093
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume quality inhering in a degenerating cell by virtue of the bearer's exhibiting an increase in volume associated with cytoplasmic abnormalities.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased volume","termid":"PATO:0000595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ballooning","termid":"PATO:0002093"}


id: PBO:0089157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traub family protein involved in ribosome biogenesis","termid":"PBO:0089157"}


id: PBO:0029138
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_methionine","termid":"PBO:0029138"}


id: PBO:0109644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 10 like 2 (pseudogene)","termid":"PBO:0109644"}


id: PBO:0091693
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human TXNL1","termid":"PBO:0091693"}


id: PBO:0060342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VIIB","termid":"PBO:0060342"}


id: PBO:0040093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase L pseudogene 1","termid":"PBO:0040093"}


id: MONDO:0015595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Posttransplant acute limbic encephalitis is a rare, acquired, non-paraneoplastic limbic encephalitis disorder, that develops in the setting of treatment-related immunosuppression, typically after allogeneic hemapoietic stem cell transplantation, characterized by onset of confusion, headache, anterograde amnesia, seizures and/or loss of consciousness 2-6 weeks following transplantation. Bilateral, non-enhancing T2 hyperintensities in limbic structures are observed on magnetic resonance imaging. Mild cerebrospinal fluid pleocytosis and syndrome of inappropriate antidiuretic hormone secretion may also be associated.","definition_xrefs":["Orphanet:163921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limbic encephalitis","termid":"MONDO:0015588"},{"relation_name":"is_a","term_name":"disease related to transplantation","termid":"MONDO:0700220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posttransplant acute limbic encephalitis","secondary_identifiers":["MEDGEN:1657779","GARD:20051","UMLS:C4750744"],"synonyms":[{"name":"PALE","type":"exact"},{"name":"pale","type":"exact"}],"termid":"MONDO:0015595","xrefs":{"Monarch":{"xref_id":"0015595"}}}


id: GO:0060616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mammary gland cord forms by elongation of the mammary bud. The cord is formed once the elongating bud breaks through the mesenchyme and reaches the fat pad.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"mammary gland cord morphogenesis","termid":"GO:0060652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland cord formation","synonyms":[{"name":"mammary gland sprout formation","type":"exact"}],"termid":"GO:0060616"}


id: PBO:0081704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 625","termid":"PBO:0081704"}


id: FYPO:0000173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the DNA replication checkpoint in a mitotic cell cycle is abnormal. The DNA replication checkpoint normally prevents the initiation of mitosis until DNA replication is complete. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of G2/M transition of mitotic cell cycle","termid":"FYPO:0000166"},{"relation_name":"is_a","term_name":"abnormal mitotic DNA integrity checkpoint","termid":"FYPO:0000643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0000298","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic cell cycle DNA replication checkpoint","secondary_identifiers":["FYPO:0000823"],"synonyms":[{"name":"abnormal DNA replication checkpoint","type":"broad"},{"name":"abnormal mitotic cell cycle DNA replication checkpoint activation","type":"exact"}],"termid":"FYPO:0000173"}


id: FYPO:0006813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions does not occur.","definition_xrefs":["PMID:30652128","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0008368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"abolished histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 trimethylation at centromere CENP-A containing region during vegetative growth","type":"related"},{"name":"abolished histone H3-K9 trimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 trimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 trimethylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me3 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"histone H3-K9 trimethylation abolished at centromere inner repeat during vegetative growth","type":"exact"},{"name":"histone H3-K9 trimethylation absent at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006813"}


id: MONDO:0020509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Secondary syringomyelia is a rare medullar disease defined as a development of a fluid-filled cavity or syrinx within the spinal cord due to blockage of CSF circulation (e.g., due to basal archnoiditis, meningeal carcinomatosis, various mass lesions), spinal cord injury (e.g., due to trauma, radiation necrosis, hemorrhage, spinal abscess), spinal dysraphism or intramedullary tumors. It presents with neuropathic pain, numbness, muscular weakness, changes in tone or spasticity or autonomic changes (hyperhidrosis, heart rate or blood pressure instability). Selective loss of pain and temperature with relative preservation of dorsal column function (touch and pressure) are classic findings.","definition_xrefs":["Orphanet:99857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syringomyelia","termid":"MONDO:0017987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary syringomyelia","secondary_identifiers":["GARD:19692","MEDGEN:1649806","UMLS:C4749399"],"termid":"MONDO:0020509","xrefs":{"Monarch":{"xref_id":"0020509"}}}


id: MONDO:0035525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharophimosis, ptosis, and epicanthus inversus syndrome","termid":"MONDO:0007201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005047","MONDO:0005328","MONDO:0000426"],"is_obsolete":false,"name":"blepharophimosis-ptosis-epicanthus inversus syndrome type 2","secondary_identifiers":["MEDGEN:1842581","UMLS:C5680363","GARD:10213","Orphanet:572361"],"synonyms":[{"name":"BPES type 2","type":"exact"},{"name":"blepharophimosis-ptosis-epicanthus inversus syndrome without premature ovarian failure","type":"exact"}],"termid":"MONDO:0035525","xrefs":{"Monarch":{"xref_id":"0035525"}}}


id: GO:0048454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the sepal. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ structural organization","termid":"GO:0048450"},{"relation_name":"part_of","term_name":"sepal morphogenesis","termid":"GO:0048447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal structural organization","secondary_identifiers":["GO:0048424"],"synonyms":[{"name":"sepal structural organisation","type":"exact"}],"termid":"GO:0048454"}


id: MONDO:0019286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A epidermal appendage anomaly that involves the sebaceous gland.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete sebaceous gland anomaly (obsolete MONDO:0019286)","secondary_identifiers":["Orphanet:79372"],"synonyms":[{"name":"epidermal appendage anomaly of sebaceous gland","type":"exact"},{"name":"sebaceous gland epidermal appendage anomaly","type":"exact"}],"termid":"MONDO:0019286","xrefs":{"Monarch":{"xref_id":"0019286"}}}


id: PBO:0061370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 30","termid":"PBO:0061370"}


id: MONDO:0035009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thrombotic disease","termid":"MONDO:0000831"},{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"isolated mesenteric vein thrombosis","secondary_identifiers":["icd11.foundation:213868120","GARD:22339","Orphanet:583861"],"termid":"MONDO:0035009","xrefs":{"Monarch":{"xref_id":"0035009"}}}


id: PBO:0003398
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Activating Protein","termid":"PBO:0003398"}


id: SO:0001057
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001057 enhanceosome (obsolete SO:0001057)","termid":"SO:0001057"}


id: GO:0050171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + a phenol = UDP + an aryl beta-D-glucoside.","definition_xrefs":["MetaCyc:PHENOL-BETA-GLUCOSYLTRANSFERASE-RXN","EC:2.4.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"phenol beta-glucosyltransferase activity","synonyms":[{"name":"UDP glucosyltransferase activity","type":"related"},{"name":"UDP-glucose glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:phenol beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:phenol beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucosyltransferase activity","type":"related"},{"name":"phenol b-glucosyltransferase activity","type":"exact"},{"name":"phenol-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucosyltransferase activity","type":"related"}],"termid":"GO:0050171"}


id: PBO:0070064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 21, pseudogene","termid":"PBO:0070064"}


id: GO:0045576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors.","definition_xrefs":["GOC:mgi_curators","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mast cell activation","termid":"GO:0045576"}


id: GO:0102123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A4 + O2 + H+ + NAD(P)H = 16alpha,17-epoxy gibberellin A4 + H2O + NAD(P).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A4 16alpha,17 epoxidase activity (obsolete GO:0102123)","termid":"GO:0102123"}


id: PBO:0050543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HPS1 biogenesis of lysosomal organelles complex 3 subunit 1","termid":"PBO:0050543"}


id: PBO:0069761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1044, pseudogene","termid":"PBO:0069761"}


id: GO:1902061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving betaine aldehyde.","definition_xrefs":["GOC:di","PMID:23563483","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"betaine aldehyde metabolic process","synonyms":[{"name":"betaine aldehyde metabolism","type":"exact"}],"termid":"GO:1902061"}


id: PBO:0057262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 487b","termid":"PBO:0057262"}


id: PR:000027986
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tropomyosin cdc8 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropomyosin cdc8","termid":"PR:000028197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin cdc8 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC27F1.02c","synonyms":[{"name":"Spom-cdc8","type":"exact"}],"termid":"PR:000027986"}


id: GO:0106005
data:
  {"annotated_genes":["SJAG_04034"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59800],"is_not":false,"summary":null,"term":"GO:0106005"}]},"cv_name":"biological_process","definition":"The process whereby a guanine in 5-cap is methylated at the N7 position of guanine.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA (guanine-N7)-methylation","termid":"GO:0036265"},{"relation_name":"part_of","term_name":"7-methylguanosine RNA capping","termid":"GO:0009452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04034":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNA 5'-cap (guanine-N7)-methylation","references_by_uniquename":{"GO_REF:0000108":null},"termid":"GO:0106005","terms_by_termid":{"GO:0106005":null}}


id: PBO:0024814
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of_regulating","termid":"PBO:0024814"}


id: GO:0033938
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6) linkages between alpha-L-fucose and N-acetyl-D-glucosamine in glycopeptides such as immunoglobulin G glycopeptide and fucosyl-asialo-agalacto-fetuin.","definition_xrefs":["EC:3.2.1.127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-L-fucosidase activity","termid":"GO:0004560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"1,6-alpha-L-fucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.127-RXN"],"synonyms":[{"name":"1,6-L-fucosyl-N-acetyl-D-glucosaminylglycopeptide fucohydrolase activity","type":"related"}],"termid":"GO:0033938"}


id: GO:0000743
data:
  {"annotated_genes":["SJAG_00140","SJAG_02286","SJAG_00113","SJAG_02045","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76696,88080,91714,97911,99567],"is_not":false,"summary":null,"term":"GO:0000743"}]},"cv_name":"biological_process","definition":"The microtubule-based movement of nuclei towards one another as a prelude to karyogamy in organisms undergoing conjugation with cellular fusion.","definition_xrefs":["GOC:clt","GOC:vw","PMID:16380440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration along microtubule","termid":"GO:0030473"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_01613":null,"SJAG_02045":null,"SJAG_02286":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0000747","GO:0006810"],"is_obsolete":false,"name":"nuclear migration involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006946"],"synonyms":[{"name":"nuclear congression","type":"exact"},{"name":"nuclear migration during conjugation with cellular fusion","type":"related"}],"termid":"GO:0000743","terms_by_termid":{"GO:0000743":null}}


id: FYPO:0003570
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the attachment of spindle microtubules to the kinetochore during a mitotic or meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal attachment of spindle microtubules to kinetochore","termid":"FYPO:0003570"}


id: PBO:0004644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Did2 (predicted)","termid":"PBO:0004644"}


id: PBO:0028250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_lysis_during_cytokinesis","termid":"PBO:0028250"}


id: SO:0001751
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL6 RNA leader sequence to the 5' end of an mRNA. SL6 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL6_acceptor_site","synonyms":[{"name":"SL6 acceptor site","type":"exact"}],"termid":"SO:0001751"}


id: PBO:0086254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that positively regulates actin assembly; forms a homodimer and interacts with G-actin; localization to the bud neck and bud tip requires Spa2p; YFR016C is not an essential gene","termid":"PBO:0086254"}


id: MONDO:0015158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"periodic fever syndrome","termid":"MONDO:0015137"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unexplained periodic fever syndrome","secondary_identifiers":["UMLS:C5681779","MEDGEN:1842497","GARD:19831","Orphanet:102237"],"termid":"MONDO:0015158","xrefs":{"Monarch":{"xref_id":"0015158"}}}


id: MONDO:0012602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the RDX gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 24","secondary_identifiers":["MESH:C567027","OMIM:611022","MEDGEN:370208","GARD:22626","UMLS:C1970239","DOID:0110482"],"synonyms":[{"name":"DFNB24","type":"narrow"},{"name":"RDX autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 24","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 24","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in RDX","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 24","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 24","type":"exact"},{"name":"deafness, autosomal recessive 24","type":"narrow"},{"name":"deafness, autosomal recessive type 24","type":"narrow"}],"termid":"MONDO:0012602","xrefs":{"Monarch":{"xref_id":"0012602"}}}


id: GO:0048632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle growth.","definition_xrefs":["PMID:15907921","GOC:lm","PMID:15726494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle tissue growth","termid":"GO:0048631"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle tissue growth","termid":"GO:0048630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of skeletal muscle tissue growth","synonyms":[{"name":"down regulation of skeletal muscle growth","type":"exact"},{"name":"down-regulation of skeletal muscle growth","type":"exact"},{"name":"downregulation of skeletal muscle growth","type":"exact"},{"name":"inhibition of skeletal muscle growth","type":"narrow"}],"termid":"GO:0048632"}


id: GO:0005530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Lectins are proteins obtained particularly from the seeds of leguminous plants, but also from many other plant and animal sources, that have binding sites for specific mono or oligosaccharides in cell walls or membranes. They thereby change the physiology of the membrane to cause agglutination, mitosis, or other biochemical changes in the cell.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lectin (obsolete GO:0005530)","synonyms":[{"name":"lectin","type":"exact"}],"termid":"GO:0005530"}


id: GO:1905429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glycine stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:18984164"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glycine","synonyms":[{"name":"response to Gly","type":"exact"},{"name":"response to aminoacetic acid","type":"exact"},{"name":"response to aminoethanoic acid","type":"exact"},{"name":"response to glycin","type":"exact"}],"termid":"GO:1905429"}


id: GO:0052525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the symbiont signal transduction pathways, the cascade of processes by which a signal interacts with a receptor. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont signal transduction pathway (obsolete GO:0052525)","synonyms":[{"name":"activation by host of symbiont signal transduction pathway","type":"narrow"},{"name":"stimulation by host of symbiont signal transduction pathway","type":"narrow"},{"name":"up regulation by host of symbiont signal transduction pathway","type":"exact"},{"name":"up-regulation by host of symbiont signal transduction pathway","type":"exact"},{"name":"upregulation by host of symbiont signal transduction pathway","type":"exact"}],"termid":"GO:0052525"}


id: FYPO:0004162
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005231"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable when cells the population are subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability upon nutrient depletion","termid":"FYPO:0000244"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability upon glucose starvation","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"decreased viability upon glucose starvation","type":"exact"},{"name":"loss of cell population viability upon glucose starvation","type":"exact"},{"name":"loss of viability upon glucose depletion","type":"exact"},{"name":"loss of viability upon glucose deprivation","type":"exact"},{"name":"loss of viability upon glucose limitation","type":"related"},{"name":"reduced viability upon glucose starvation","type":"exact"}],"termid":"FYPO:0004162","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0005231":null}}


id: PBO:0046162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELF2 pseudogene 2","termid":"PBO:0046162"}


id: PBO:0087310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small plasma membrane protein; confers resistance to amphotericin B and is a potential target of this common antifungal drug; related to a family of plant polypeptides that are overexpressed under high salt concentration or low temperature; not essential for viability; deletion causes hyperpolarization of the plasma membrane potential","termid":"PBO:0087310"}


id: PBO:0017056
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ars Binding Protein","termid":"PBO:0017056"}


id: PBO:0051570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 15 receptor subunit alpha","termid":"PBO:0051570"}


id: PBO:0087375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ssh1p-Sss1p-Sbh2p complex component; involved in protein translocation into the endoplasmic reticulum; SBH2 has a paralog, SBH1, that arose from the whole genome duplication","termid":"PBO:0087375"}


id: PBO:0046392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelial PAS domain protein 1","termid":"PBO:0046392"}


id: PBO:0025416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene, possibly truncated by rearrangement and LTR","termid":"PBO:0025416"}


id: SO:0002165
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short tandem repeat expansion with an increase in a sequence of three nucleotide units repeated in tandem compared to a reference sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"short_tandem_repeat_expansion","termid":"SO:0002162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide_repeat_expansion","synonyms":[{"name":"trinucleotide repeat expansion","type":"exact"}],"termid":"SO:0002165"}


id: GO:0031786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1B melatonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin receptor binding","termid":"GO:0031784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 1B melatonin receptor binding","synonyms":[{"name":"type 1B melatonin receptor ligand","type":"narrow"}],"termid":"GO:0031786"}


id: MONDO:0000691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pain disorder (obsolete MONDO:0000691)","termid":"MONDO:0000691","xrefs":{"Monarch":{"xref_id":"0000691"}}}


id: GO:0010533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency or rate of activation of JAK (Janus Activated Kinase) protein. The activation of JAK protein is the process of introducing a phosphate group to a tyrosine residue of a JAK (Janus Activated Kinase) protein, thereby activating it.","definition_xrefs":["GOC:dph","GOC:tb","PMID:17190829","PMID:9135582"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of activation of Janus kinase activity (obsolete GO:0010533)","synonyms":[{"name":"regulation of activation of JAK protein","type":"exact"},{"name":"regulation of activation of JAK1 kinase activity","type":"narrow"},{"name":"regulation of activation of JAK1 protein","type":"narrow"},{"name":"regulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"regulation of activation of JAK2 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of JAK protein","type":"related"},{"name":"regulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of JAK2 protein","type":"narrow"}],"termid":"GO:0010533"}


id: PBO:0078497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 1-1","termid":"PBO:0078497"}


id: GO:0048586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of long-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.","definition_xrefs":["ISBN:0709408862","GOC:jid","GOC:pj","ISBN:0697037754","ISBN:0582015952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photoperiodism, flowering","termid":"GO:2000028"},{"relation_name":"regulates","term_name":"long-day photoperiodism, flowering","termid":"GO:0048574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of long-day photoperiodism, flowering","termid":"GO:0048586"}


id: MONDO:0003823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete transient hypogammaglobulinemia of infancy (obsolete MONDO:0003823)","termid":"MONDO:0003823","xrefs":{"Monarch":{"xref_id":"0003823"}}}


id: MONDO:0003730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A leukemia characterized by the absence of leukemic cells in the peripheral blood.","definition_xrefs":["NCIT:C4982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"aleukemic leukemia","secondary_identifiers":["DOID:12965","ICD9:208.80","MEDGEN:164094","SCTID:302856006","UMLS:C0877858","DOID:6004"],"synonyms":[{"name":"aleukemic leukemia","type":"exact"},{"name":"aleukemic myelosis","type":"related"},{"name":"subleukemic leukaemia","type":"related"},{"name":"subleukemic leukemia","type":"related"}],"termid":"MONDO:0003730","xrefs":{"Monarch":{"xref_id":"0003730"}}}


id: GO:0102068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1E,4E,8E)-alpha-humulene + NADPH + O2 + H+ = 10-hydroxy-alpha-humulene + NADP + H2O.","definition_xrefs":["EC:1.14.14.113","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alpha-humulene 10-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-10628","RHEA:32491"],"termid":"GO:0102068"}


id: PBO:0036426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd3a (predicted)","termid":"PBO:0036426"}


id: PBO:0060933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFATC2IP antisense RNA 1","termid":"PBO:0060933"}


id: PBO:0030837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_guanine_import","termid":"PBO:0030837"}


id: PBO:0058850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8079","termid":"PBO:0058850"}


id: PBO:0089715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Pex1","termid":"PBO:0089715"}


id: PBO:0080318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 82 pseudogene","termid":"PBO:0080318"}


id: GO:0000115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that regulates transcription such that the target genes are transcribed as part of the S phase of the mitotic cell cycle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in S phase of mitotic cell cycle (obsolete GO:0000115)","synonyms":[{"name":"S-phase-specific transcription in mitotic cell cycle","type":"related"},{"name":"S-specific transcription in mitotic cell cycle","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter during S-phase of mitotic cell cycle","type":"related"},{"name":"regulation of transcription involved in S phase of mitotic cell cycle","type":"exact"},{"name":"regulation of transcription involved in S-phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000115"}


id: GO:0045607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of auditory hair cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal cell differentiation","termid":"GO:0045604"},{"relation_name":"is_a","term_name":"regulation of inner ear receptor cell differentiation","termid":"GO:2000980"},{"relation_name":"regulates","term_name":"inner ear auditory receptor cell differentiation","termid":"GO:0042491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inner ear auditory receptor cell differentiation","synonyms":[{"name":"regulation of auditory hair cell differentiation","type":"exact"},{"name":"regulation of auditory receptor cell differentiation","type":"related"}],"termid":"GO:0045607"}


id: GO:0006192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into IDP, inosine (5'-)diphosphate, to produce ITP.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete IDP phosphorylation (obsolete GO:0006192)","termid":"GO:0006192"}


id: GO:1904636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an ionomycin stimulus.","definition_xrefs":["GOC:TermGenie","PMID:17516843","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ionomycin","termid":"GO:1904636"}


id: PBO:0067176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 233, pseudogene","termid":"PBO:0067176"}


id: MONDO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Wolffian duct adenoma (obsolete MONDO:0002364)","termid":"MONDO:0002364","xrefs":{"Monarch":{"xref_id":"0002364"}}}


id: PBO:0060015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 3","termid":"PBO:0060015"}


id: PBO:0055245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2672","termid":"PBO:0055245"}


id: PBO:0004502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp102","termid":"PBO:0004502"}


id: GO:0071907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of various parts of the digestive tract with respect to the left and right halves of the organism. The digestive tract is the anatomical structure through which food passes and is processed.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of left/right symmetry","termid":"GO:0007368"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of digestive tract left/right asymmetry","synonyms":[{"name":"determination of gut left/right asymmetry","type":"exact"},{"name":"determination of left/right asymmetry of the digestive tract","type":"exact"}],"termid":"GO:0071907"}


id: GO:0004540
data:
  {"annotated_genes":["SJAG_04907","SJAG_04019","SJAG_00966","SJAG_02039","SJAG_06022","SJAG_01260","SJAG_06613","SJAG_03425","SJAG_16455","SJAG_02547","SJAG_04824","SJAG_00401","SJAG_00841","SJAG_03745","SJAG_01822","SJAG_00081","SJAG_01836","SJAG_03952","SJAG_06586","SJAG_03689","SJAG_04198","SJAG_00400","SJAG_04885","SJAG_00253","SJAG_01798","SJAG_00306","SJAG_04369","SJAG_04916","SJAG_04084","SJAG_04587","SJAG_05214","SJAG_03876","SJAG_03132","SJAG_01463","SJAG_01476","SJAG_03796","SJAG_01431","SJAG_03539","SJAG_01433","SJAG_02993","SJAG_04527","SJAG_02156","SJAG_01551","SJAG_00997","SJAG_02553","SJAG_03962","SJAG_00772","SJAG_01623","SJAG_02540","SJAG_02275","SJAG_04407","SJAG_02374","SJAG_03276","SJAG_01948","SJAG_04091","SJAG_04519","SJAG_02790","SJAG_02621","SJAG_04006","SJAG_00955","SJAG_04435","SJAG_03234","SJAG_01884","SJAG_03328","SJAG_00754","SJAG_04582","SJAG_04818","SJAG_04153"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96400,116098],"is_not":false,"summary":null,"term":"GO:0004540"},{"annotations":[66806,79843,63160,70345,102429,105625,104755,99276,71265,90304,80000,104013,118711,74943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000175"},{"annotations":[70511,80679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042781"},{"annotations":[73971,78152,70378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004534"},{"annotations":[92028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140432"},{"annotations":[108860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032296"},{"annotations":[118501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070551"},{"annotations":[114817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008859"},{"annotations":[92031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990174"},{"annotations":[108147,79284,77693,74657,116996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004535"},{"annotations":[68806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990838"},{"annotations":[73966,68148,60620,77043,59981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004525"},{"annotations":[115783,106019,71608,106020,113875,96835,104909,105128,95045,97120,115696,118997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000171"},{"annotations":[68756,95046,102398,63798,104910,115697,60657,71612,97121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004526"},{"annotations":[79760,72262,72765,116719,70377,63889,107831,66976,109374,77171,113306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004521"},{"annotations":[76771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016891"},{"annotations":[99955,101378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004532"},{"annotations":[77317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008419"},{"annotations":[76321,88624,103292,80564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004523"},{"annotations":[71711,79315,73284,118073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis 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id: FYPO:0006943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an 3'-5' RNA helicase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal 3'-5' RNA helicase activity","termid":"FYPO:0006943"}


id: PBO:0075063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-26","termid":"PBO:0075063"}


id: MONDO:0017154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Pulmonary arterial hypertension associated with portal hypertension (PAH-PH) is a form of pulmonary arterial hypertension (PAH), characterized by an elevated pulmonary arterial resistance leading to right heart failure observed as a complication of portal hypertension.","definition_xrefs":["Orphanet:275813"],"gene_count":0,"genotype_count":0,"name":"obsolete pulmonary arterial hypertension associated with portal hypertension (obsolete MONDO:0017154)","secondary_identifiers":["SCTID:445237003"],"synonyms":[{"name":"PAH associated with portal hypertension","type":"exact"},{"name":"POPH","type":"exact"},{"name":"Portopulmonary hypertension","type":"exact"}],"termid":"MONDO:0017154","xrefs":{"Monarch":{"xref_id":"0017154"}}}


id: MONDO:0020408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complete atrioventricular canal","termid":"MONDO:0015273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"complete atrioventricular canal-tetralogy of fallot syndrome","secondary_identifiers":["Orphanet:99068","UMLS:C3640086","GARD:16894","MEDGEN:768726"],"synonyms":[{"name":"CAVC type C","type":"exact"},{"name":"CAVC-Fallot tetralogy syndrome","type":"exact"},{"name":"complete atrioventricular canal type C","type":"exact"}],"termid":"MONDO:0020408","xrefs":{"Monarch":{"xref_id":"0020408"}}}


id: FYPO:0004012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 4,6-pyruvylated D-galactose (4,6-O-[(1R)-1-carboxyethylidene]-D-galactose) measured at the cell surface is normal (i.e. indistinguishable from wild type). The cell surface refers to the external part of the cell wall and/or plasma membrane.","definition_xrefs":["PomBase:mah","PMID:25195688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cell surface pyruvylated galactose level","synonyms":[{"name":"normal cell surface 4,6-4,6-O-[(1R)-1-carboxyethylidene]-D-galactose level","type":"exact"},{"name":"normal cell surface 4,6-pyruvylated D-galactose level","type":"exact"},{"name":"normal cell surface PvGal level","type":"exact"},{"name":"normal cell surface pyruvylated galactose level during mitotic cell cycle","type":"related"},{"name":"normal cell surface pyruvylated galactose level during vegetative growth","type":"exact"},{"name":"normal level of pyruvylated galactose at cell surface","type":"exact"}],"termid":"FYPO:0004012"}


id: PBO:0081320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 106","termid":"PBO:0081320"}


id: FYPO:0002590
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any tRNA processing intermediates with 3' extensions measured in the mitochondria is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA or precursor level during vegetative growth","termid":"FYPO:0008101"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions","synonyms":[{"name":"increased accumulation of mitochondrial tRNA processing intermediates with 3' extensions","type":"related"},{"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions during mitotic cell cycle","type":"related"},{"name":"increased level of mitochondrial tRNA processing intermediates with 3' extensions during vegetative growth","type":"exact"}],"termid":"FYPO:0002590"}


id: PR:Q09929
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transferase CAF17, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transferase caf17, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC21E11.07","secondary_identifiers":["UniProtKB:Q09929"],"synonyms":[{"name":"Spom972h-IBA57","type":"exact"}],"termid":"PR:Q09929"}


id: GO:0060462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lung lobe from an initial condition to its mature state. This process begins with the formation of a lung lobe by branching morphogenesis and ends with the mature structure. A lung lobe is one of the rounded projections that compose the lung.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung lobe development","termid":"GO:0060462"}


id: PBO:0065231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 12","termid":"PBO:0065231"}


id: GO:2001207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription elongation from RNA polymerase I promoter.","definition_xrefs":["PMID:20299458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription elongation","termid":"GO:0032784"},{"relation_name":"regulates","term_name":"transcription elongation by RNA polymerase I","termid":"GO:0006362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"regulation of transcription elongation by RNA polymerase I","synonyms":[{"name":"regulation of RNA elongation from Pol I promoter","type":"exact"},{"name":"regulation of transcription elongation from RNA polymerase I promoter","type":"exact"}],"termid":"GO:2001207"}


id: PBO:0040684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS2 pseudogene 2","termid":"PBO:0040684"}


id: PATO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's lying or growing on the ground but with erect or rising tips.","definition_xrefs":["thefreedictionary:www.thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostrate","termid":"PATO:0000631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decumbent","termid":"PATO:0002343"}


id: MONDO:0957307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"woolly hair-skin fragility syndrome","secondary_identifiers":["OMIM:620415","MEDGEN:375148","UMLS:C1843292"],"termid":"MONDO:0957307","xrefs":{"Monarch":{"xref_id":"0957307"}}}


id: PBO:0031538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_molecular_function","termid":"PBO:0031538"}


id: PBO:0017715
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GRF9","termid":"PBO:0017715"}


id: PBO:0017798
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEp Transporter","termid":"PBO:0017798"}


id: MONDO:0005747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease caused by infection with Enterovirus.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Picornaviridae infectious disease","termid":"MONDO:0005914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enterovirus infectious disease","secondary_identifiers":["EFO:0007255","ICD9:079.89","MESH:D004769","SCTID:53648006","UMLS:C0014378","MEDGEN:8647"],"synonyms":[{"name":"Enterovirus caused disease or disorder","type":"exact"},{"name":"Enterovirus disease or disorder","type":"exact"},{"name":"Enterovirus infection","type":"related"},{"name":"Enterovirus infectious disease","type":"exact"},{"name":"disease caused by enterovirus","type":"related"},{"name":"disease due to enterovirus","type":"exact"},{"name":"enteroviral infection","type":"related"},{"name":"enterovirus infection","type":"related"},{"name":"enterovirus infectious disease","type":"exact"},{"name":"infection, Enterovirus","type":"related"},{"name":"infections, Enterovirus","type":"related"}],"termid":"MONDO:0005747","xrefs":{"Monarch":{"xref_id":"0005747"}}}


id: PBO:0070117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 31 pseudogene","termid":"PBO:0070117"}


id: PR:Q9HDY3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB1A10.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDY3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane protein PB1A10.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.07c","synonyms":[{"name":"Spom972h-SPAPB1A10.07c","type":"exact"}],"termid":"PR:Q9HDY3"}


id: PATO:0002055
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fragility which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"fragile","termid":"PATO:0001362"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased fragility","termid":"PATO:0002055"}


id: PBO:0054726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2135","termid":"PBO:0054726"}


id: PBO:0051357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-10 (pseudogene)","termid":"PBO:0051357"}


id: PBO:0001391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf7","termid":"PBO:0001391"}


id: MONDO:0021130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of sphingolipid biosynthetic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"disorder of sphingolipid biosynthesis","synonyms":[{"name":"inborn error of sphingolipid biosynthetic process","type":"exact"},{"name":"inborn sphingolipid biosynthetic process disorder","type":"exact"},{"name":"rare inborn error of sphingolipid biosynthetic process","type":"exact"}],"termid":"MONDO:0021130","xrefs":{"Monarch":{"xref_id":"0021130"}}}


id: PBO:0016104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIA complex small subunit Toa2 (predicted)","termid":"PBO:0016104"}


id: PBO:0066762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 60","termid":"PBO:0066762"}


id: MONDO:0023208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fuqua Berkovitz syndrome","termid":"MONDO:0023208","xrefs":{"Monarch":{"xref_id":"0023208"}}}


id: MONDO:0017224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pelizaeus-Merzbacher disease (PMD) in female carriers is the presentation of PMD in some women carrying mutations in the PLP1 gene (Xq22).","definition_xrefs":["Orphanet:280229"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pelizeaus-Merzbacher spectrum disorder","termid":"MONDO:0010714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Pelizaeus-Merzbacher disease in female carriers","secondary_identifiers":["GARD:21075","icd11.foundation:1751389523","MEDGEN:1753109","UMLS:C5438815"],"termid":"MONDO:0017224","xrefs":{"Monarch":{"xref_id":"0017224"}}}


id: PBO:0045471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally regulated GTP binding protein 1","termid":"PBO:0045471"}


id: PBO:0044837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 125","termid":"PBO:0044837"}


id: GO:0032262
data:
  {"annotated_genes":["SJAG_04713","SJAG_00533","SJAG_03708","SJAG_04354","SJAG_04709"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68259,93300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[88772,68258,92299,93301,87785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"}]},"cv_name":"biological_process","definition":"Any process which produces a pyrimidine nucleotide from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound salvage","termid":"GO:0008655"},{"relation_name":"is_a","term_name":"nucleotide salvage","termid":"GO:0043173"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleotide salvage","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"termid":"GO:0032262","terms_by_termid":{"GO:0044206":null,"GO:0044211":null}}


id: PBO:0040008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 16","termid":"PBO:0040008"}


id: PBO:0070875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 6","termid":"PBO:0070875"}


id: GO:0047882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH(2) + estradiol-17beta + O2 = 6beta-hydroxyestradiol-17beta + A + H2O.","definition_xrefs":["RHEA:19137","EC:1.14.99.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"estradiol 6-beta-monooxygenase activity","secondary_identifiers":["MetaCyc:ESTRADIOL-6-BETA-MONOOXYGENASE-RXN","KEGG_REACTION:R03086"],"synonyms":[{"name":"estradiol 6-beta-hydroxylase activity","type":"related"},{"name":"estradiol 6b-hydroxylase activity","type":"exact"},{"name":"estradiol 6b-monooxygenase activity","type":"exact"},{"name":"estradiol 6beta-hydroxylase activity","type":"related"},{"name":"estradiol 6beta-monooxygenase activity","type":"related"},{"name":"estradiol-17beta,hydrogen-donor:oxygen oxidoreductase (6beta-hydroxylating)","type":"related"}],"termid":"GO:0047882"}


id: MONDO:0006129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete central nervous system lymphoma (obsolete MONDO:0006129)","termid":"MONDO:0006129","xrefs":{"Monarch":{"xref_id":"0006129"}}}


id: PBO:0043386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citramalyl-CoA lyase","termid":"PBO:0043386"}


id: GO:0090101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090092"},{"relation_name":"negatively_regulates","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","synonyms":[{"name":"negative regulation of transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0090101"}


id: PBO:0045706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 4","termid":"PBO:0045706"}


id: GO:0050896
data:
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id: PBO:0067284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 366, pseudogene","termid":"PBO:0067284"}


id: PBO:0085360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoprotein involved in vacuole inheritance; degraded in late M phase of the cell cycle; acts as a vacuole-specific receptor for myosin Myo2p; involved in regulation of asymmetric inheritance of aggregated/misfolded proteins and age reset","termid":"PBO:0085360"}


id: PBO:0028889
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_elongated_multinucleate_cell","termid":"PBO:0028889"}


id: PBO:0057065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 147b","termid":"PBO:0057065"}


id: PBO:0060834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 like E3 ubiquitin protein ligase","termid":"PBO:0060834"}


id: GO:0098896
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a postsynaptic early endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early endosome membrane","termid":"GO:0031901"},{"relation_name":"is_a","term_name":"postsynaptic endosome membrane","termid":"GO:0098895"},{"relation_name":"part_of","term_name":"postsynaptic early endosome","termid":"GO:0098842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005768","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"postsynaptic early endosome membrane","termid":"GO:0098896"}


id: PBO:0078590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 3, Y-linked","termid":"PBO:0078590"}


id: PBO:0087537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein N-terminal acetyltransferase NatA; NatA comprises Nat1p, Ard1p, Nat5p; acetylates many proteins to influence telomeric silencing, cell cycle, heat-shock resistance, mating, sporulation, early stages of mitophagy; protein abundance increases under DNA replication stress; mutations in human homolog X-linked NAA10 lead to Ogden syndrome (S37P) and intellectual disability (R116W); expression of human NAA10 and NAA15 can complement ard1 nat1 double mutant","termid":"PBO:0087537"}


id: PBO:0029565
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-binucleate_monoseptate_cell,_with_angled_septum","termid":"PBO:0029565"}


id: PBO:0060246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCBP2 antisense RNA 1","termid":"PBO:0060246"}


id: PBO:0091894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive antidote Wtf4","termid":"PBO:0091894"}


id: PBO:0059284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L41","termid":"PBO:0059284"}


id: PBO:0082200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-mannosidase; involved in ER-associated protein degradation (ERAD); catalyzes the removal of one mannose residue from a glycosylated protein, converting the modification from Man9GlcNAc to Man8GlcNAc; catalyzes the last step in glycoprotein maturation in the ER and is critical for ER protein degradation","termid":"PBO:0082200"}


id: GO:0052406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving carbohydrates within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont carbohydrate (obsolete GO:0052406)","termid":"GO:0052406"}


id: PR:G2TRP9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox20 gene.","definition_xrefs":["UniProtKB:G2TRP9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase protein 20, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.18","synonyms":[{"name":"Spom972h-cox20","type":"exact"}],"termid":"PR:G2TRP9"}


id: PBO:0069134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 384, pseudogene","termid":"PBO:0069134"}


id: PBO:0080713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing antisense to TP53","termid":"PBO:0080713"}


id: PBO:0057134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 217","termid":"PBO:0057134"}


id: FYPO:0003989
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable and has one nucleus, and the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate","termid":"FYPO:0002731"},{"relation_name":"is_a","term_name":"inviable stubby vegetative cell","termid":"FYPO:0002107"},{"relation_name":"is_a","term_name":"mononucleate","termid":"FYPO:0002731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"inviable stubby mononucleate vegetative cell","synonyms":[{"name":"inviable stubby mononucleate cell during vegetative growth","type":"exact"},{"name":"inviable stubby mononucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable watermelon-shaped mononucleate vegetative cell","type":"exact"},{"name":"lethal; stubby mononucleate vegetative cell","type":"exact"},{"name":"stubby mononucleate inviable vegetative cell","type":"exact"}],"termid":"FYPO:0003989"}


id: PBO:0083835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily conserved 19S regulatory particle assembly-chaperone; involved in the assembly of the base subcomplex of the 19S proteasomal regulatory particle (RP); involved in DNA mismatch repair during slow growth; weak similarity to Msh1p; structural study suggests Hsm3p is a scaffold protein for Rpt1p-Rpt2p complex formation; ortholog of human 19S subunit S5b","termid":"PBO:0083835"}


id: PBO:0036351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5'- exoribonuclease Rex1 (predicted)","termid":"PBO:0036351"}


id: PBO:0080242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 5 (gene/pseudogene)","termid":"PBO:0080242"}


id: GO:0052778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diacetylchitobiose, the N,N'-diacetylated derivative of chitobiose.","definition_xrefs":["PMID:22797760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino disaccharide metabolic process","termid":"GO:0052779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diacetylchitobiose metabolic process","synonyms":[{"name":"diacetylchitobiose metabolism","type":"exact"}],"termid":"GO:0052778"}


id: GO:0090159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sphingolipids that contributes to endoplasmic reticulum membrane organization.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid biosynthetic process","termid":"GO:0030148"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane organization","termid":"GO:0090158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006629"],"is_obsolete":false,"name":"sphingolipid biosynthesis involved in endoplasmic reticulum membrane organization","synonyms":[{"name":"sphingolipid biosynthesis involved in endoplasmic reticulum membrane organisation","type":"exact"}],"termid":"GO:0090159"}


id: GO:0048532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the configuration of the constituent parts of an anatomical structure. This process pertains to the physical shaping of a rudimentary structure. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure arrangement","synonyms":[{"name":"anatomical structure organization","type":"broad"},{"name":"anatomical structure structural organization","type":"exact"},{"name":"organization of an anatomical structure","type":"exact"},{"name":"structural organization","type":"exact"}],"termid":"GO:0048532"}


id: SO:0001008
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A base-paired stem with loop of 4 non-hydrogen bonded nucleotides.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem_loop","termid":"SO:0000313"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraloop","secondary_identifiers":["http://en.wikipedia.org/wiki/Tetraloop"],"termid":"SO:0001008"}


id: PBO:0056420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCKS like 1 pseudogene 1","termid":"PBO:0056420"}


id: PBO:0031867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylic acid transmembrane transporter (predicted)","termid":"PBO:0031867"}


id: FYPO:0000914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-ammonia ligase (also known as glutamine synthetase) activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal glutamate-ammonia ligase activity","synonyms":[{"name":"normal GS activity","type":"exact"},{"name":"normal glutamine synthetase activity","type":"exact"},{"name":"normal glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"FYPO:0000914"}


id: PBO:0089978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-H2B chaperone, FACT complex subunit Pob3","termid":"PBO:0089978"}


id: PBO:0049110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 171","termid":"PBO:0049110"}


id: PBO:0067514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 655, pseudogene","termid":"PBO:0067514"}


id: PBO:0089095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-FO ATP synthase chaperone Atp12","termid":"PBO:0089095"}


id: GO:0046313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphoarginine, a phosphorylated derivative of the amino acid arginine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoarginine metabolic process","termid":"GO:0006604"},{"relation_name":"is_a","term_name":"phosphagen catabolic process","termid":"GO:0042397"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"phosphoarginine catabolic process","synonyms":[{"name":"phosphoarginine breakdown","type":"exact"},{"name":"phosphoarginine catabolism","type":"exact"},{"name":"phosphoarginine degradation","type":"exact"}],"termid":"GO:0046313"}


id: PBO:0039640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde oxidase 3, pseudogene","termid":"PBO:0039640"}


id: PBO:0000887
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.119","termid":"PBO:0000887"}


id: PBO:0049920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeostatic iron regulator","termid":"PBO:0049920"}


id: PBO:0085218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyltransferase subunit; this complex adds a palmitoyl lipid moiety to heterolipidated substrates such as Ras1p and Ras2p through a thioester linkage; palmitoylation is required for Ras2p membrane localization; Palmitoyltransferase is composed of Shr5p and Erf2","termid":"PBO:0085218"}


id: PBO:0028689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_horsetail_nucleus_morphology","termid":"PBO:0028689"}


id: GO:1900796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terrequinone A.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:17291795","PMID:17704773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"quinone biosynthetic process","termid":"GO:1901663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"terrequinone A biosynthetic process","secondary_identifiers":["GO:1900794"],"synonyms":[{"name":"terrequinone A anabolism","type":"exact"},{"name":"terrequinone A biosynthesis","type":"exact"},{"name":"terrequinone A formation","type":"exact"},{"name":"terrequinone A metabolic process","type":"broad"},{"name":"terrequinone A metabolism","type":"broad"},{"name":"terrequinone A synthesis","type":"exact"}],"termid":"GO:1900796"}


id: MONDO:0014449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital analbuminemia (CAA) is characterized by the absence or dramatic reduction of circulating human serum albumin (HSA).","definition_xrefs":["Orphanet:86816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital analbuminemia","secondary_identifiers":["MEDGEN:930922","UMLS:C4305253","GARD:13056","NCIT:C124851","SCTID:718721006","OMIM:616000"],"synonyms":[{"name":"ANALBA","type":"related"},{"name":"analbuminemia","type":"related"}],"termid":"MONDO:0014449","xrefs":{"Monarch":{"xref_id":"0014449"}}}


id: MONDO:0021137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rare or common","termid":"MONDO:0021135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not rare","synonyms":[{"name":"common","type":"exact"}],"termid":"MONDO:0021137","xrefs":{"Monarch":{"xref_id":"0021137"}}}


id: FYPO:0007125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation begins when the mitotic spindle is not present.","definition_xrefs":["PomBase:mah","PMID:9864354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000337","FYPO:0000641","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mitotic sister chromatid separation in absence of mitotic spindle","synonyms":[{"name":"mitotic chromosome separation in absence of mitotic spindle","type":"exact"},{"name":"mitotic sister chromatid separation in absence of mitotic spindle during vegetative growth","type":"exact"},{"name":"mitotic sister chromatid separation without mitotic spindle","type":"exact"},{"name":"sister chromatid separation in absence of spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007125"}


id: PBO:0043681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORO7-PAM16 readthrough","termid":"PBO:0043681"}


id: PBO:0078711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-6","termid":"PBO:0078711"}


id: PR:O75004
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc24 gene.","definition_xrefs":["UniProtKB:O75004","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.07c","synonyms":[{"name":"Spom972h-cdc24","type":"exact"}],"termid":"PR:O75004"}


id: MONDO:0006282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from the endothelial cells of the lymphatic vessels.","definition_xrefs":["NCIT:C3205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lymphangiosarcoma","secondary_identifiers":["MEDGEN:6154","UMLS:C0024224","ICDO:9170/3","EFO:1000339","DOID:2689","ICD9:171.9","MESH:D008204","SCTID:403986008"],"synonyms":[{"name":"Stewart-Treves syndrome","type":"exact"},{"name":"lymphangioendothelial sarcoma","type":"exact"},{"name":"lymphangiosarcoma","type":"exact"},{"name":"lymphangiosarcoma of Stewart and Treves","type":"related"},{"name":"lymphangiosarcoma, malignant","type":"exact"},{"name":"malignant lymphangioendothelioma","type":"exact"}],"termid":"MONDO:0006282","xrefs":{"Monarch":{"xref_id":"0006282"}}}


id: PBO:0055160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2579","termid":"PBO:0055160"}


id: PBO:0089335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline/ethanolamine kinase Eki1","termid":"PBO:0089335"}


id: PBO:0059277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L36 pseudogene 1","termid":"PBO:0059277"}


id: GO:0005813
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center","termid":"GO:0005815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"centrosome","secondary_identifiers":["Wikipedia:Centrosome"],"termid":"GO:0005813"}


id: GO:0050749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with an apolipoprotein E receptor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete apolipoprotein E receptor binding (obsolete GO:0050749)","synonyms":[{"name":"apolipoprotein E receptor binding","type":"exact"}],"termid":"GO:0050749"}


id: GO:1904241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of VCP-NPL4-UFD1 AAA ATPase complex assembly.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904239"},{"relation_name":"positively_regulates","term_name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"activation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"activation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"activation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"narrow"},{"name":"activation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"narrow"},{"name":"activation of p97-Ufd1-Npl4 complex assembly","type":"narrow"},{"name":"activation of p97-Ufd1-Npl4 complex formation","type":"narrow"},{"name":"positive regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"positive regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"positive regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"positive regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"positive regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"up regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"up regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"up regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"up regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"up regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"up regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"up-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"up-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"up-regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"up-regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"up-regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"up-regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"upregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"upregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"upregulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"upregulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"upregulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"upregulation of p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904241"}


id: PBO:0052680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 48","termid":"PBO:0052680"}


id: PBO:0055961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 74B","termid":"PBO:0055961"}


id: PBO:0050122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 32","termid":"PBO:0050122"}


id: PBO:0039443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and KH domain containing 1","termid":"PBO:0039443"}


id: PBO:0055783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LONRF2 pseudogene 3","termid":"PBO:0055783"}


id: GO:0160093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of cordate pharynx over time, from its formation to the mature structure.","definition_xrefs":["PMID:23020903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx development","termid":"GO:0060465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chordate pharynx development","termid":"GO:0160093"}


id: PBO:0051843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRS4 antisense RNA 1","termid":"PBO:0051843"}


id: PBO:0075860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 8, pseudogene","termid":"PBO:0075860"}


id: PR:O14135
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.09","synonyms":[{"name":"Spom972h-set8","type":"exact"}],"termid":"PR:O14135"}


id: MONDO:0013793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalomyopathy, mitochondrial, due to voltage-dependent anion channel deficiency","secondary_identifiers":["UMLS:C3281106","MEDGEN:482736","OMIM:614520"],"synonyms":[{"name":"encephalomyopathy, mitochondrial, due to voltage-dependent anion channel deficiency","type":"exact"}],"termid":"MONDO:0013793","xrefs":{"Monarch":{"xref_id":"0013793"}}}


id: GO:0016524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with alpha-latrotoxin, a potent presynaptic neurotoxin, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling","PMID:10025961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"latrotoxin receptor activity","synonyms":[{"name":"latrophilin","type":"narrow"}],"termid":"GO:0016524"}


id: PBO:0036154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_pausing_at_tRNA_genes","termid":"PBO:0036154"}


id: MONDO:0013385
data:
  {"annotated_genes":["SJAG_00731"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87356],"is_not":false,"summary":null,"term":"MONDO:0013385"}]},"cv_name":"mondo","definition":"Any Treacher-Collins syndrome in which the cause of the disease is a mutation in the POLR1D gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Treacher-Collins syndrome","termid":"MONDO:0002457"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Treacher Collins syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:462333","DOID:0080790","UMLS:C3150983","GARD:15698","OMIM:613717"],"synonyms":[{"name":"POLR1D Treacher-Collins syndrome","type":"exact"},{"name":"TCS2","type":"related"},{"name":"TREACHER COLLINS syndrome 2","type":"related"},{"name":"Treacher Collins syndrome 2","type":"exact"},{"name":"Treacher Collins syndrome type 2","type":"exact"},{"name":"Treacher-Collins syndrome caused by mutation in POLR1D","type":"exact"}],"termid":"MONDO:0013385","terms_by_termid":{"MONDO:0013385":null},"xrefs":{"Monarch":{"xref_id":"0013385"}}}


id: GO:0018800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-oxopent-3-ene-1,2,5-tricarboxylate = 2-oxohept-3-enedioate + CO2.","definition_xrefs":["EC:4.1.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase activity","secondary_identifiers":["MetaCyc:4.1.1.68-RXN","UM-BBD_reactionID:r0367","RHEA:14397"],"synonyms":[{"name":"5-carboxymethyl-2-oxo-hex-3-ene-1,6-dioate decarboxylase activity","type":"related"},{"name":"5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioate decarboxylase activity","type":"exact"},{"name":"5-oxopent-3-ene-1,2,5-tricarboxylate carboxy-lyase (2-oxohept-3-enedioate-forming)","type":"related"},{"name":"5-oxopent-3-ene-1,2,5-tricarboxylate carboxy-lyase activity","type":"related"},{"name":"HpaG-2","type":"related"},{"name":"HpaG2","type":"related"},{"name":"OPET decarboxylase activity","type":"exact"}],"termid":"GO:0018800"}


id: FYPO:0002582
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature mitochondrial transfer RNA (tRNA) measured in a cell is normal (i.e. indistinguishable from wild type). Total tRNA or a specific tRNA may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mature tRNA level","termid":"FYPO:0002580"},{"relation_name":"is_a","term_name":"normal mitochondrial RNA level","termid":"FYPO:0004960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mature mitochondrial tRNA level","synonyms":[{"name":"normal mature mitochondrial tRNA accumulation","type":"related"},{"name":"normal mature mitochondrial tRNA level during mitotic cell cycle","type":"related"},{"name":"normal mature mitochondrial tRNA level during vegetative growth","type":"exact"},{"name":"normal mature mitochondrial tRNA transcript level","type":"exact"},{"name":"normal mature mitochondrial transfer RNA level","type":"exact"},{"name":"normal mitochondrial tRNA level","type":"broad"}],"termid":"FYPO:0002582"}


id: RO:HOM0000043
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that is based on distant shared ancestry.","definition_xrefs":["ISBN:978-0252068140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_plesiomorphy_relationship_with","synonyms":[{"name":"plesiomorphous to","type":"exact"},{"name":"symplesiomorphy","type":"related"}],"termid":"RO:HOM0000043"}


id: PBO:0000412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding (predicted)","termid":"PBO:0000412"}


id: PBO:0030633
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_7-methylguanosine_cap_hypermethylation","termid":"PBO:0030633"}


id: PBO:0081321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 107","termid":"PBO:0081321"}


id: GO:0071471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of non-ionic solutes (e.g. mannitol, sorbitol) in the environment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to non-ionic osmotic stress","termid":"GO:0010335"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to non-ionic osmotic stress","termid":"GO:0071471"}


id: MONDO:0005272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myelodysplastic syndrome characterized by dysplasia seen in at least 10% of the early cells of 1 cell type (either red blood cells, white blood cells, or megakaryocytes) in the bone marrow.","definition_xrefs":["doi:10.5772/intechopen.82532"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"myelodysplastic syndrome with multilineage dysplasia","termid":"MONDO:0019453"},{"relation_name":"is_a","term_name":"myelodysplastic syndrome","termid":"MONDO:0018881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myelodysplastic syndrome with single lineage dysplasia","secondary_identifiers":["ICD9:238.72","MESH:D000753","SCTID:109996008","GARD:19585","EFO:0003802","icd11.foundation:149518956","NCIT:C2872","NCIT:C82591","UMLS:C2826318","ICDO:9980/3","MEDGEN:415300","Orphanet:98826","SCTID:1153345005","MedDRA:10038269"],"synonyms":[{"name":"MDS with single lineage dysplasia","type":"exact"},{"name":"MDS-SLD","type":"exact"},{"name":"RA","type":"exact"},{"name":"aregenerative anaemia","type":"related"},{"name":"aregenerative anemia","type":"related"},{"name":"refractory anaemia","type":"exact"},{"name":"refractory anemia","type":"exact"}],"termid":"MONDO:0005272","xrefs":{"Monarch":{"xref_id":"0005272"}}}


id: MONDO:0001401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female breast carcinoma","termid":"MONDO:0004379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"female breast nipple and areola cancer","secondary_identifiers":["DOID:11889","MEDGEN:507933","ICD9:174.0","SCTID:188147009","UMLS:C0024621"],"synonyms":[{"name":"malignant neoplasm of nipple and areola of female breast","type":"exact"},{"name":"malignant neoplasm of nipple or areola of female breast","type":"exact"}],"termid":"MONDO:0001401","xrefs":{"Monarch":{"xref_id":"0001401"}}}


id: PR:O94424
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general transcription factor IIF subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02358","PANTHER:PTHR10445:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor IIF subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.13c","secondary_identifiers":["UniProtKB:O94424"],"synonyms":[{"name":"ATP-dependent helicase TFG2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GTF2F2","type":"exact"},{"name":"TFIIF medium subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TFIIF-beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94424"}


id: PR:P00332
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alcohol dehydrogenase, propanol-preferring that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC13B11.01","secondary_identifiers":["UniProtKB:P00332"],"synonyms":[{"name":"Spom972h-adhP","type":"exact"}],"termid":"PR:P00332"}


id: GO:0002560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the carrying out of an immune response by a basophil.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basophil mediated immunity","termid":"GO:0002560"}


id: PBO:0000232
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longest ORF in feature","termid":"PBO:0000232"}


id: PBO:0057823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3142 host gene","termid":"PBO:0057823"}


id: GO:1901173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phytoene.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"phytoene metabolic process","termid":"GO:1901172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phytoene catabolic process","synonyms":[{"name":"phytoene breakdown","type":"exact"},{"name":"phytoene catabolism","type":"exact"},{"name":"phytoene degradation","type":"exact"}],"termid":"GO:1901173"}


id: PBO:0014258
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HIS1","termid":"PBO:0014258"}


id: PBO:0005591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Chr2 (predicted)","termid":"PBO:0005591"}


id: PBO:0111825
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin family","termid":"PBO:0111825"}


id: GO:0099503
data:
  {"annotated_genes":["SJAG_01189","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115854,88202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070382"}]},"cv_name":"cellular_component","definition":"A cytoplasmic, membrane bound vesicle that is capable of fusing to the plasma membrane to release its contents into the extracellular space.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01189":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"secretory vesicle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099503","terms_by_termid":{"GO:0070382":null}}


id: PBO:0075088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 138","termid":"PBO:0075088"}


id: MONDO:1010299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrosis, non-human animal","secondary_identifiers":["OMIA:000750"],"termid":"MONDO:1010299","xrefs":{"Monarch":{"xref_id":"1010299"}}}


id: MONDO:0009213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi anemia caused by mutations of the FANCC gene. This gene provides instructions for making a protein that delays the onset of apoptosis and promotes homologous recombination repair of damaged DNA.","definition_xrefs":["NCIT:C125704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0002280","MONDO:0021190","MONDO:0005066"],"is_obsolete":false,"name":"Fanconi anemia complementation group C","secondary_identifiers":["GARD:15168","UMLS:C3468041","DOID:0111087","MEDGEN:483324","OMIM:227645"],"synonyms":[{"name":"FA3","type":"exact"},{"name":"FACC","type":"exact"},{"name":"FANCC","type":"exact"},{"name":"Fanconi Anemia, complementation group type C","type":"exact"},{"name":"Fanconi anaemia complementation group type C","type":"exact"},{"name":"Fanconi anemia complementation group C","type":"exact"},{"name":"Fanconi anemia complementation group type C","type":"exact"},{"name":"Fanconi anemia, complementation group C","type":"related"},{"name":"Fanconi pancytopenia type 3","type":"exact"},{"name":"Fanconi pancytopenia, type 3","type":"related"},{"name":"facc","type":"related"}],"termid":"MONDO:0009213","xrefs":{"Monarch":{"xref_id":"0009213"}}}


id: PBO:0017434
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts_during","termid":"PBO:0017434"}


id: PBO:0030367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate_multiseptate_vegetative_cell","termid":"PBO:0030367"}


id: GO:0140904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a cytoophidium. Cytoophidia are mesoscale, intracellular, filamentous structures that contain metabolic enzymes.","definition_xrefs":["PMID:27362644","PMID:25223282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoophidium organization","termid":"GO:0140904"}


id: FYPO:0002871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a growing cell tip is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to growing cell tip","synonyms":[{"name":"decreased protein localisation to growing cell tip","type":"exact"},{"name":"decreased protein localization to growing cell end","type":"exact"},{"name":"decreased protein localization to growing cell tip during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to growing cell tip during vegetative growth","type":"exact"},{"name":"reduced protein localization to growing cell tip","type":"exact"}],"termid":"FYPO:0002871"}


id: GO:0003010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within voluntary skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the voluntary skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and it is under voluntary control. Voluntary skeletal muscle is skeletal muscle that is under conscious control.","definition_xrefs":["GOC:mtg_muscle","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle contraction","termid":"GO:0003009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}


id: PBO:0026766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ferric-chelate_reductase_activity","termid":"PBO:0026766"}


id: PBO:0079274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 41, pseudogene","termid":"PBO:0079274"}


id: PBO:0040062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex inhibitor","termid":"PBO:0040062"}


id: GO:0014854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inactivity stimulus.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to inactivity","termid":"GO:0014854"}


id: PBO:0062742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily H member 1","termid":"PBO:0062742"}


id: GO:0031498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The controlled breakdown of chromatin from a higher order structure into its simpler subcomponents, DNA, histones, other proteins, and sometimes RNA.","definition_xrefs":["PMID:20404130"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin disassembly (obsolete GO:0031498)","synonyms":[{"name":"chromatin maintenance","type":"broad"}],"termid":"GO:0031498"}


id: PBO:0054623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2028","termid":"PBO:0054623"}


id: PBO:0058108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4323","termid":"PBO:0058108"}


id: GO:0047895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 formaldehyde + H2O = methanol + formate.","definition_xrefs":["EC:1.2.98.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"formaldehyde dismutase activity","secondary_identifiers":["MetaCyc:RXN-11453","RHEA:19221"],"synonyms":[{"name":"aldehyde dismutase activity","type":"related"},{"name":"cannizzanase activity","type":"related"},{"name":"formaldehyde:formaldehyde oxidoreductase activity","type":"related"},{"name":"nicotinoprotein aldehyde dismutase","type":"related"}],"termid":"GO:0047895"}


id: PBO:0061723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT family member 2H, pseudogene","termid":"PBO:0061723"}


id: GO:0010270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the oxygen evolving complex (OEC) of photosystem II on a thylakoid membrane. The OEC protects the calcium-4 manganese-5 oxide cluster which is bound to the D1 and CP43 proteins. The exact protein composition of the OEC varies between cyanobacteria and plants, and in plants consists of three extrinsic nuclear-encoded polypeptides: PsbO, PsbP and PsbQ.","definition_xrefs":["GOC:aa","PMID:16282331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem II assembly","termid":"GO:0010207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosystem II oxygen evolving complex assembly","synonyms":[{"name":"OEC (PSII) ASSEMBLY","type":"exact"}],"termid":"GO:0010270"}


id: PBO:0072748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A9","termid":"PBO:0072748"}


id: MONDO:0014879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete patent ductus arteriosus 3 (obsolete MONDO:0014879)","termid":"MONDO:0014879","xrefs":{"Monarch":{"xref_id":"0014879"}}}


id: PBO:0065134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein activator of interferon induced protein kinase EIF2AK2 pseudogene 1","termid":"PBO:0065134"}


id: GO:0005849
data:
  {"annotated_genes":["SJAG_02720","SJAG_04022","SJAG_01599","SJAG_00961","SJAG_00527","SJAG_03853","SJAG_02037","SJAG_03226","SJAG_03500","SJAG_02865","SJAG_03594","SJAG_03728","SJAG_01175","SJAG_04587","SJAG_03624","SJAG_01791","SJAG_03233","SJAG_01412","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70744,118621,70527,77182,73015,111672,71786,70376,77764,79706,73493,93769,93262,112332,71485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005847"},{"annotations":[110187,111947,93791,98465,99421,99958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005848"}]},"cv_name":"cellular_component","definition":"Any macromolecular complex involved in cleavage or polyadenylation of mRNA molecules.","definition_xrefs":["GOC:mah","PMID:10357856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00527":null,"SJAG_00961":null,"SJAG_01175":null,"SJAG_01412":null,"SJAG_01599":null,"SJAG_01791":null,"SJAG_02037":null,"SJAG_02720":null,"SJAG_02865":null,"SJAG_03126":null,"SJAG_03226":null,"SJAG_03233":null,"SJAG_03500":null,"SJAG_03594":null,"SJAG_03624":null,"SJAG_03728":null,"SJAG_03853":null,"SJAG_04022":null,"SJAG_04587":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mRNA cleavage factor complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005849","terms_by_termid":{"GO:0005847":null,"GO:0005848":null}}


id: PBO:0058377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4749","termid":"PBO:0058377"}


id: FYECO:0000244
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 3MB-PP1 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 3MB-PP1","termid":"FYECO:0000244"}


id: MONDO:0021839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the order SPIROCHAETALES.","definition_xrefs":["MESH:D013145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spirochaetales infections","secondary_identifiers":["EFO:0009567","MEDGEN:11556","UMLS:C0037974"],"synonyms":[{"name":"INFECT SPIROCHAETALES","type":"related"},{"name":"INFECT SPIROCHETE","type":"related"},{"name":"Infection, Spirochaetales","type":"related"},{"name":"Infection, Spirochete","type":"related"},{"name":"Infections, Spirochaetales","type":"related"},{"name":"Infections, Spirochete","type":"related"},{"name":"SPIROCHAETALES INFECT","type":"related"},{"name":"SPIROCHETE INFECT","type":"related"},{"name":"Spirochaetales Infection","type":"related"},{"name":"Spirochaetales Infections","type":"related"},{"name":"Spirochetal infection","type":"related"},{"name":"Spirochete Infection","type":"related"},{"name":"Spirochete Infections","type":"related"},{"name":"Spirochetosis","type":"related"}],"termid":"MONDO:0021839","xrefs":{"Monarch":{"xref_id":"0021839"}}}


id: PBO:0000868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENV10 family protein (predicted)","termid":"PBO:0000868"}


id: MOD:01571
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["Unimod:731#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","termid":"MOD:01570"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01571"}


id: FYECO:0000134
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The assay, or growth of cells, was conducted under strict anaerobic conditions.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaerobic environment","synonyms":[{"name":"- O","type":"exact"},{"name":"- oxygen","type":"exact"},{"name":"-O","type":"exact"},{"name":"-oxygen","type":"exact"},{"name":"anaerobiosis","type":"exact"},{"name":"minus oxygen","type":"exact"}],"termid":"FYECO:0000134"}


id: GO:0052049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a type III secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type III secretion system (obsolete GO:0052049)","termid":"GO:0052049"}


id: PBO:0046552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 6","termid":"PBO:0046552"}


id: GO:0043503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the skeletal muscle fibers change their phenotypic profiles in response to altered functional demands and a variety of signals. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["PMID:11181628","PMID:12605307","GOC:mtg_muscle","PMID:11449884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"},{"relation_name":"part_of","term_name":"skeletal muscle adaptation","termid":"GO:0043501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle fiber adaptation","synonyms":[{"name":"skeletal muscle fiber plasticity","type":"related"},{"name":"skeletal muscle fibre plasticity","type":"exact"},{"name":"skeletal myofiber plasticity","type":"exact"},{"name":"skeletal myofibre plasticity","type":"exact"}],"termid":"GO:0043503"}


id: PBO:0080327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 91 pseudogene","termid":"PBO:0080327"}


id: GO:0005703
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A swelling at a site along the length of a polytene chromosome, thought to be the site of active transcription.","definition_xrefs":["GOC:bf","ISBN:0120649012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal region","termid":"GO:0098687"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"polytene chromosome puff","termid":"GO:0005703"}


id: FYPO:0008307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell divides with a smaller diameter than normal (i.e. compared to wild-type cells under the same conditions).","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable thin vegetative cell","termid":"FYPO:0001877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell diameter at division","termid":"FYPO:0008307"}


id: PBO:0056507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose binding lectin 2","termid":"PBO:0056507"}


id: GO:0016729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces an acceptor other than disulfide, NAD, NADP or oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on CH2 groups, other acceptors (obsolete GO:0016729)","synonyms":[{"name":"oxidoreductase activity, acting on CH2 groups, other acceptors","type":"exact"}],"termid":"GO:0016729"}


id: PR:O94369
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1604.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1604.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.03c","synonyms":[{"name":"Spom972h-SPBC1604.03c","type":"exact"}],"termid":"PR:O94369"}


id: MONDO:0008780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the ALS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile amyotrophic lateral sclerosis","termid":"MONDO:0017593"},{"relation_name":"is_a","term_name":"ALS2-related motor neuron disease","termid":"MONDO:0100227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 2, juvenile","secondary_identifiers":["MEDGEN:349246","MESH:C565957","UMLS:C1859807","OMIM:205100","GARD:15137","DOID:0060194"],"synonyms":[{"name":"ALS, juvenile","type":"related"},{"name":"ALS2","type":"exact"},{"name":"ALS2 amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 2","type":"exact"},{"name":"amyotrophic lateral sclerosis 2, juvenile","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in ALS2","type":"exact"}],"termid":"MONDO:0008780","xrefs":{"Monarch":{"xref_id":"0008780"}}}


id: GO:0015437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a lipopolysaccharide from the cytosolic to the exoplasmic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["EC:7.5.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0140303"],"is_obsolete":false,"name":"lipopolysaccharide floppase activity","synonyms":[{"name":"ATP-dependent intramembrane lipopolysaccharide transporter activity","type":"exact"},{"name":"ATPase-coupled intramembrane lipopolysaccharide transporter activity","type":"broad"},{"name":"LPS-transporting ATPase activity","type":"exact"},{"name":"lipopolysaccharide floppase activity (cytosolic to exoplasmic leaflet)","type":"exact"},{"name":"lipopolysaccharide-transporting ATPase activity","type":"exact"}],"termid":"GO:0015437"}


id: MOD:00181
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-sulfo-L-tyrosine.","definition_xrefs":["PubMed:2303439","PubMed:3778455","Unimod:40#Y","OMSSA:114","PubMed:14752058","PubMed:3801003","RESID:AA0172","PubMed:10226369","DeltaMass:88"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfated residue","termid":"MOD:00695"},{"relation_name":"is_a","term_name":"residues isobaric at 243.02-243.03 Da","termid":"MOD:00774"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-sulfo-L-tyrosine","synonyms":[{"name":"(S)-2-amino-3-(4-sulfooxyphenyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(4-hydroxyphenyl)propanoic acid 4'-sulfate","type":"exact"},{"name":"MOD_RES Sulfotyrosine","type":"exact"},{"name":"O-Sulfonation","type":"related"},{"name":"O4'-sulfo-L-tyrosine","type":"exact"},{"name":"O4-sulfotyrosine","type":"exact"},{"name":"OSulfTyr","type":"exact"},{"name":"Sulfo","type":"related"},{"name":"Sulphation (of O of Tyrosine)","type":"exact"},{"name":"Tyrosinyl Sulphate","type":"exact"},{"name":"sulfationy","type":"exact"},{"name":"tyrosine sulfate","type":"exact"},{"name":"tyrosine-O-sulfonic acid","type":"exact"},{"name":"tyrosine-O-sulphonic acid","type":"exact"}],"termid":"MOD:00181"}


id: PBO:0027284
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_cellular_response_to_salt_stress","termid":"PBO:0027284"}


id: PBO:0027493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_miconazole","termid":"PBO:0027493"}


id: PBO:0038694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 6","termid":"PBO:0038694"}


id: MONDO:0016851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome X","secondary_identifiers":["UMLS:C5191056","Orphanet:261519","GARD:20783","icd11.foundation:573923144","MEDGEN:1673747"],"synonyms":[{"name":"UPD(X)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type X","type":"exact"}],"termid":"MONDO:0016851","xrefs":{"Monarch":{"xref_id":"0016851"}}}


id: GO:2000374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of oxygen metabolic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"oxygen metabolic process","termid":"GO:0072592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of oxygen metabolic process","synonyms":[{"name":"regulation of diatomic oxygen metabolic process","type":"exact"},{"name":"regulation of oxygen metabolism","type":"exact"}],"termid":"GO:2000374"}


id: GO:0019974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to interleukin-14.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-14 binding (obsolete GO:0019974)","synonyms":[{"name":"IL-14 binding","type":"exact"}],"termid":"GO:0019974"}


id: PBO:0117042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATF7 antisense RNA 1","termid":"PBO:0117042"}


id: GO:0075062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of symbiont invasive hypha formation within host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of invasive hypha growth (obsolete GO:0075062)","synonyms":[{"name":"regulation of symbiont invasive hypha formation in host","type":"exact"},{"name":"regulation of symbiont invasive hypha formation within host","type":"exact"}],"termid":"GO:0075062"}


id: GO:0070253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of somatostatin from secretory granules in the D cells of the pancreas.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"somatostatin secretion","termid":"GO:0070253"}


id: GO:0009491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete redox-active disulfide bond electron carrier (obsolete GO:0009491)","synonyms":[{"name":"redox-active disulfide bond electron carrier","type":"exact"},{"name":"redox-active disulphide bond electron carrier","type":"exact"}],"termid":"GO:0009491"}


id: PBO:0078805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 22-1","termid":"PBO:0078805"}


id: GO:0008837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: LL-2,6-diaminopimelate = meso-2,6-diaminopimelate.","definition_xrefs":["RHEA:15393","EC:5.1.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"diaminopimelate epimerase activity","secondary_identifiers":["KEGG_REACTION:R02735","MetaCyc:DIAMINOPIMEPIM-RXN"],"synonyms":[{"name":"LL-2,6-diaminoheptanedioate 2-epimerase activity","type":"related"}],"termid":"GO:0008837"}


id: GO:0009374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to biotin (cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid), the (+) enantiomer of which is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"biotin binding","synonyms":[{"name":"vitamin B7 binding","type":"exact"},{"name":"vitamin H binding","type":"exact"}],"termid":"GO:0009374"}


id: GO:0061111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell and contributes to the progression of the lung over time from its initial formation to the mature organ.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"},{"relation_name":"is_a","term_name":"epithelial-mesenchymal cell signaling","termid":"GO:0060684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"epithelial-mesenchymal cell signaling involved in lung development","synonyms":[{"name":"epithelial-mesenchymal cell signalling involved in lung development","type":"exact"}],"termid":"GO:0061111"}


id: GO:2000145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell motility.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of locomotion","termid":"GO:0040012"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell motility","secondary_identifiers":["Reactome:R-HSA-6785631"],"synonyms":[{"name":"regulation of cell locomotion","type":"exact"},{"name":"regulation of cell movement","type":"related"},{"name":"regulation of movement of a cell","type":"exact"}],"termid":"GO:2000145"}


id: PBO:0018142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein carboxyl methyltransferase, implicated in DNA damage response","termid":"PBO:0018142"}


id: PBO:0048663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol kinase 5","termid":"PBO:0048663"}


id: PR:Q09707
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.09c gene.","definition_xrefs":["UniProtKB:Q09707","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyltransferase C18B11.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.09c","synonyms":[{"name":"Spom972h-SPAC18B11.09c","type":"exact"}],"termid":"PR:Q09707"}


id: MONDO:0008990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"laryngotracheoesophageal cleft","termid":"MONDO:0016060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cleft larynx, posterior","secondary_identifiers":["UMLS:C1859083","MEDGEN:349091","GARD:4015","OMIM:215800","Orphanet:2005"],"synonyms":[{"name":"Novak syndrome","type":"related"},{"name":"cleft larynx, posterior","type":"exact"},{"name":"laryngotracheoesophageal cleft pulmonary hypoplasia","type":"related"},{"name":"stridor, congenital","type":"related"}],"termid":"MONDO:0008990","xrefs":{"Monarch":{"xref_id":"0008990"}}}


id: FYPO:0002060
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA 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