# terms

id: MONDO:0044347
data:
  {"annotated_genes":["SJAG_00988","SJAG_00235","SJAG_01162","SJAG_02297","SJAG_03929","SJAG_01351","SJAG_04495","SJAG_02796","SJAG_00839","SJAG_04334","SJAG_04217"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[86240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[86544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[86516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[87192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[86323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009606"},{"annotations":[85872,85871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009605"},{"annotations":[86799,86798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[85934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"}]},"cv_name":"mondo","definition":"A disease or disorder that involves the erythrocyte.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00235":null,"SJAG_00839":null,"SJAG_00988":null,"SJAG_01162":null,"SJAG_01351":null,"SJAG_02297":null,"SJAG_02796":null,"SJAG_03929":null,"SJAG_04217":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"erythrocyte disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:526127","SCTID:38292009","ICD9:289.9","UMLS:C0221016"],"synonyms":[{"name":"disease of erythrocyte","type":"exact"},{"name":"disease or disorder of erythrocyte","type":"exact"},{"name":"disorder of erythrocyte","type":"exact"},{"name":"erythrocyte disease","type":"exact"},{"name":"erythrocyte disease or disorder","type":"exact"},{"name":"red blood cell disease","type":"exact"},{"name":"red blood cell disorder","type":"exact"}],"termid":"MONDO:0044347","terms_by_termid":{"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009340":null,"MONDO:0009605":null,"MONDO:0009606":null,"MONDO:0009950":null,"MONDO:0010480":null,"MONDO:0013275":null,"MONDO:0019531":null},"xrefs":{"Monarch":{"xref_id":"0044347"}}}


id: PBO:0052918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-1","termid":"PBO:0052918"}


id: PBO:0003589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CorA family magnesium ion transporter (predicted)","termid":"PBO:0003589"}


id: GO:1903121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of TRAIL-activated apoptotic signaling pathway.","definition_xrefs":["GOC:bf","GOC:PARL","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902041"},{"relation_name":"regulates","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:1903121"}


id: MONDO:0009673
data:
  {"annotated_genes":["SJAG_03894"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86775],"is_not":false,"summary":null,"term":"MONDO:0009673"}]},"cv_name":"mondo","definition":"Proximal spinal muscular atrophy type 2 (SMA2) is a chronic infantile form of proximal spinal muscular atrophy characterized by muscle weakness and hypotonia resulting from the degeneration and loss of the lower motor neurons in the spinal cord and the brain stem nuclei.","definition_xrefs":["Orphanet:83418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal spinal muscular atrophy","termid":"MONDO:0019079"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03894":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"spinal muscular atrophy, type II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536879","DOID:0050530","MEDGEN:95975","OMIM:253550","SCTID:128212001","ICD9:335.19","icd11.foundation:867148636","NANDO:1200005","UMLS:C0393538","GARD:4945"],"synonyms":[{"name":"Dubowitz disease","type":"related"},{"name":"Intermediate spinal muscular atrophy","type":"exact"},{"name":"SMA II","type":"related"},{"name":"SMA type 2","type":"exact"},{"name":"SMA type II","type":"exact"},{"name":"SMA-II","type":"exact"},{"name":"SMA2","type":"exact"},{"name":"Sma 2","type":"related"},{"name":"chronic infantile spinal muscular atrophy","type":"exact"},{"name":"chronic spinal muscular atrophy","type":"exact"},{"name":"muscular atrophy, spinal, Intermediate type","type":"related"},{"name":"muscular atrophy, spinal, infantile chronic form","type":"exact"},{"name":"muscular atrophy, spinal, intermediate type","type":"exact"},{"name":"proximal spinal muscular atrophy type 2","type":"related"},{"name":"spinal muscular atrophy type 2","type":"related"},{"name":"spinal muscular atrophy type II","type":"related"},{"name":"spinal muscular atrophy, type 2","type":"related"},{"name":"spinal muscular atrophy, type II","type":"exact"},{"name":"spinal muscular atrophy-2","type":"exact"}],"termid":"MONDO:0009673","terms_by_termid":{"MONDO:0009673":null},"xrefs":{"Monarch":{"xref_id":"0009673"}}}


id: PBO:0073382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET binding protein 1","termid":"PBO:0073382"}


id: PBO:0028140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_18S_rRNA_level","termid":"PBO:0028140"}


id: PBO:0064585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member F","termid":"PBO:0064585"}


id: GO:1901811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-carotene.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00802","PMID:11387982","MetaCyc:PWY-5943","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"beta-carotene metabolic process","termid":"GO:1901810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"beta-carotene catabolic process","synonyms":[{"name":"beta-carotene breakdown","type":"exact"},{"name":"beta-carotene catabolism","type":"exact"},{"name":"beta-carotene degradation","type":"exact"}],"termid":"GO:1901811"}


id: GO:0007113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A mitotic cell cycle in which chromosomes are replicated and sister chromatids separate, but spindle formation, nuclear membrane breakdown and nuclear division do not occur, resulting in an increased number of chromosomes in the cell.","definition_xrefs":["GOC:curators","GOC:dos","GOC:expert_vm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle","termid":"GO:0000278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"endomitotic cell cycle","secondary_identifiers":["Wikipedia:Mitosis#Endomitosis"],"synonyms":[{"name":"endomitosis","type":"related"}],"termid":"GO:0007113"}


id: MONDO:0001269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder affecting the sclera. Examples include inflammatory processes (e.g., scleritis and episcleritis), and degenerative processes. Primary tumors of the sclera are extremely rare.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"scleral disorder","secondary_identifiers":["MESH:D015422","NCIT:C79717","UMLS:C0036412","MEDGEN:11345","DOID:11343","SCTID:33064008","ICD9:379.19"],"synonyms":[{"name":"disease of sclera","type":"exact"},{"name":"disease or disorder of sclera","type":"exact"},{"name":"disorder of sclera","type":"exact"},{"name":"sclera disease","type":"exact"},{"name":"sclera disease or disorder","type":"exact"},{"name":"sclera disorder","type":"exact"},{"name":"scleral disorder","type":"exact"}],"termid":"MONDO:0001269","xrefs":{"Monarch":{"xref_id":"0001269"}}}


id: PBO:0073111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 39U member 1","termid":"PBO:0073111"}


id: FYPO:0002281
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a germ tube with abnormal size, shape, or structure.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination","termid":"FYPO:0000316"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination with abnormal germ tube morphology","synonyms":[{"name":"inviable following spore germination with abnormal germ tube morphology","type":"exact"},{"name":"inviable germinated spore with abnormal germ tube morphology","type":"exact"},{"name":"lethal after spore germination with abnormal germ tube morphology","type":"exact"}],"termid":"FYPO:0002281"}


id: GO:0097454
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Small finger-like extension of a Schwann cell that contacts the nodal membrane.","definition_xrefs":["PMID:15988042","NIF_Subcellular:sao1890444066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvillus","termid":"GO:0005902"},{"relation_name":"is_a","term_name":"glial cell projection","termid":"GO:0097386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Schwann cell microvillus","termid":"GO:0097454"}


id: PBO:0005367
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic liver disease","termid":"PBO:0005367"}


id: GO:0033272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of myo-inositol hexakisphosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"myo-inositol phosphate transport","termid":"GO:0033271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate transport","synonyms":[{"name":"phytate transport","type":"exact"}],"termid":"GO:0033272"}


id: PBO:0000528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Snu23 (predicted)","termid":"PBO:0000528"}


id: PBO:0062281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 1 pseudogene","termid":"PBO:0062281"}


id: MONDO:0012530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Palmoplantar keratoderma-XX sex reversal-predisposition to squamous cell carcinoma syndrome is characterized by sex reversal in males with a 46, XX (SRY-negative) karyotype, palmoplantar hyperkeratosis and a predisposition to squamous cell carcinoma. To date, five cases (four of whom were brothers) have been described. The etiology is unknown.","definition_xrefs":["Orphanet:85112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"46,XX disorder of sex development","termid":"MONDO:0017576"},{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratoderma-XX sex reversal-predisposition to squamous cell carcinoma syndrome","secondary_identifiers":["GARD:16733","OMIM:610644","MEDGEN:461281","MESH:C567165","UMLS:C3149931"],"synonyms":[{"name":"palmoplantar hyperkeratosis and true hermaphroditism","type":"related"},{"name":"palmoplantar hyperkeratosis with squamous cell carcinoma of skin and 46,XX SEX reversal","type":"related"},{"name":"palmoplantar hyperkeratosis with squamous cell carcinoma of skin and sex reversal","type":"exact"},{"name":"palmoplantar hyperkeratosis-XX sex reversal-predisposition to squamous cell carcinoma syndrome","type":"exact"}],"termid":"MONDO:0012530","xrefs":{"Monarch":{"xref_id":"0012530"}}}


id: GO:0047202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-O-sinapoyl-beta-D-glucose + choline = O-sinapoylcholine + D-glucose.","definition_xrefs":["RHEA:12024","EC:2.3.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-sinapoyltransferase activity","termid":"GO:0016753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"sinapoylglucose-choline O-sinapoyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.91-RXN","KEGG_REACTION:R03075"],"synonyms":[{"name":"1-O-(4-hydroxy-3,5-dimethoxycinnamoyl)-beta-D-glucose:choline 1-O-(4-hydroxy-3,5-dimethoxycinnamoyl)transferase activity","type":"related"},{"name":"sinapine synthase activity","type":"related"}],"termid":"GO:0047202"}


id: MONDO:0007457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diastema, dental medial","secondary_identifiers":["UMLS:C1852086","OMIM:125900","MESH:C565098","MEDGEN:342157"],"synonyms":[{"name":"diastema, dental medial","type":"exact"}],"termid":"MONDO:0007457","xrefs":{"Monarch":{"xref_id":"0007457"}}}


id: PBO:0046323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1 pseudogene 4","termid":"PBO:0046323"}


id: PBO:0079867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unk zinc finger","termid":"PBO:0079867"}


id: PBO:0091527
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces MicroProtein","termid":"PBO:0091527"}


id: GO:0002310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of an alpha-beta T cell population by cell division as part of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell activation involved in immune response","termid":"GO:0002287"},{"relation_name":"is_a","term_name":"T cell proliferation involved in immune response","termid":"GO:0002309"},{"relation_name":"is_a","term_name":"alpha-beta T cell proliferation","termid":"GO:0046633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell proliferation involved in immune response","synonyms":[{"name":"alpha-beta T cell proliferation during immune response","type":"related"},{"name":"alpha-beta T lymphocyte proliferation during immune response","type":"related"},{"name":"alpha-beta T-cell proliferation during immune response","type":"related"},{"name":"alpha-beta T-lymphocyte proliferation during immune response","type":"related"}],"termid":"GO:0002310"}


id: MONDO:0009598
data:
  {"annotated_genes":["SJAG_00602"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85787],"is_not":false,"summary":null,"term":"MONDO:0009598"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"metaphyseal chondrodysplasia-retinitis pigmentosa syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:166035","MESH:C565398","GARD:17017","OMIM:250410","MEDGEN:381579","UMLS:C1855188"],"synonyms":[{"name":"RPSKA","type":"related"},{"name":"brachydactyly-short stature-retinitis pigmentosa syndrome","type":"related"},{"name":"metaphyseal chondrodysplasia with retinitis pigmentosa","type":"related"},{"name":"retinitis pigmentosa with or without skeletal anomalies","type":"related"}],"termid":"MONDO:0009598","terms_by_termid":{"MONDO:0009598":null},"xrefs":{"Monarch":{"xref_id":"0009598"}}}


id: GO:2001152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of renal water transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of renal water transport","termid":"GO:2001151"},{"relation_name":"negatively_regulates","term_name":"renal water transport","termid":"GO:0003097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of renal water transport","termid":"GO:2001152"}


id: GO:0031472
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle found in bacteria consisting of a proteinaceous coat containing enzymes for the degradation of 1,2-propanediol whose purpose is the protection of the rest of the cell from the toxic propionaldehyde product of the enzyme diol dehydratase.","definition_xrefs":["GOC:js","PMID:11844753","PMID:10498708","PMID:12923081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial microcompartment","termid":"GO:0031469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"propanediol degradation polyhedral organelle","termid":"GO:0031472"}


id: GO:0042753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a circadian rhythm behavior.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"},{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"positively_regulates","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of circadian rhythm","synonyms":[{"name":"activation of circadian rhythm","type":"narrow"},{"name":"stimulation of circadian rhythm","type":"narrow"},{"name":"up regulation of circadian rhythm","type":"exact"},{"name":"up-regulation of circadian rhythm","type":"exact"},{"name":"upregulation of circadian rhythm","type":"exact"}],"termid":"GO:0042753"}


id: PBO:0076333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 2","termid":"PBO:0076333"}


id: MONDO:0016136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebellar ataxia with peripheral neuropathy (obsolete MONDO:0016136)","secondary_identifiers":["Orphanet:207028"],"termid":"MONDO:0016136","xrefs":{"Monarch":{"xref_id":"0016136"}}}


id: PBO:0047570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 21","termid":"PBO:0047570"}


id: PBO:0091381
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6 umol/min/mg","termid":"PBO:0091381"}


id: FYPO:0005734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate dehydrogenase activity using NAPD+ as a cofactor is decreased during a cellular response to iron ion starvation.","definition_xrefs":["PMID:20435771","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased glutamate dehydrogenase (NADP+) activity","termid":"FYPO:0000983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased glutamate dehydrogenase (NADP+) activity during cellular response to iron ion starvation","synonyms":[{"name":"decreased NAD(P)H-dependent glutamate dehydrogenase activity during cellular response to iron ion starvation","type":"exact"},{"name":"decreased NADP-GDH activity during cellular response to iron ion starvation","type":"exact"},{"name":"decreased glutamate dehydrogenase (NADP+) activity during iron ion starvation","type":"exact"}],"termid":"FYPO:0005734"}


id: PBO:0062844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclast stimulating factor 1 pseudogene 1","termid":"PBO:0062844"}


id: GO:0004465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate, where the triacylglycerol is part of a lipoprotein. May also hydrolyze diacylglycerol and phospholipids present in lipoproteins.","definition_xrefs":["EC:3.1.1.34","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triacylglycerol lipase activity","termid":"GO:0004806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"lipoprotein lipase activity","secondary_identifiers":["Reactome:R-HSA-174757","Reactome:R-HSA-2395768","Reactome:R-HSA-8980228","Reactome:R-HSA-1482811","Reactome:R-HSA-8979996","Reactome:R-HSA-6789310"],"synonyms":[{"name":"clearing factor lipase activity","type":"related"},{"name":"diacylglycerol hydrolase activity","type":"related"},{"name":"diacylglycerol lipase activity","type":"related"},{"name":"diglyceride lipase activity","type":"related"},{"name":"lipemia-clearing factor","type":"related"},{"name":"postheparin esterase activity","type":"related"},{"name":"postheparin lipase activity","type":"related"},{"name":"triacylglycero-protein acylhydrolase activity","type":"related"}],"termid":"GO:0004465"}


id: MONDO:0009247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fronto-facio-nasal dysostosis is characterized by multiple craniofacial anomalies (brachycephaly, blepharophimosis, ptosis, S-shaped palpebral fissures, coloboma, cleft lip and palate, deformed nostrils, encephalocele, hypertelorism, midface hypoplasia, malformed eyes, and absent inner eyelashes).","definition_xrefs":["Orphanet:1791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"frontonasal dysplasia","termid":"MONDO:0016643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"frontofacionasal dysplasia","secondary_identifiers":["MEDGEN:444125","OMIM:229400","SCTID:716022002","UMLS:C2931720","GARD:2390","MESH:C538063"],"synonyms":[{"name":"Ffnd","type":"related"},{"name":"Frontofacionasal dysostosis","type":"related"},{"name":"Gollop syndrome","type":"exact"},{"name":"fronto-facio-nasal dyplasia","type":"related"},{"name":"fronto-facio-nasal dysostosis","type":"related"},{"name":"frontofacionasal dysplasia","type":"exact"}],"termid":"MONDO:0009247","xrefs":{"Monarch":{"xref_id":"0009247"}}}


id: GO:0032350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving any hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone levels","termid":"GO:0010817"},{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hormone metabolic process","synonyms":[{"name":"regulation of hormone metabolism","type":"exact"}],"termid":"GO:0032350"}


id: PBO:0082954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic proteinase A (Pep4p) inhibitor; dependent on Pbs2p and Hog1p protein kinases for osmotic induction; intrinsically unstructured, N-terminal half becomes ordered in the active site of proteinase A upon contact","termid":"PBO:0082954"}


id: GO:0071169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a part of a chromosome that is organized into chromatin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of protein localization to chromosome","termid":"GO:0070199"},{"relation_name":"is_a","term_name":"protein localization to chromatin","termid":"GO:0071168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to chromatin","synonyms":[{"name":"establishment of protein localisation to chromatin","type":"exact"}],"termid":"GO:0071169"}


id: PBO:0041781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caprin family member 2","termid":"PBO:0041781"}


id: PBO:0080909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta","termid":"PBO:0080909"}


id: PBO:0088938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic threonine-tRNA ligase Trs1","termid":"PBO:0088938"}


id: PBO:0057688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1277","termid":"PBO:0057688"}


id: GO:0003015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A circulatory system process carried out by the heart. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circulatory system process","termid":"GO:0003013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart process","synonyms":[{"name":"cardiac process","type":"related"}],"termid":"GO:0003015"}


id: PBO:0069570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 842, pseudogene","termid":"PBO:0069570"}


id: PBO:0077097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8A","termid":"PBO:0077097"}


id: MONDO:0000140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0000140 (obsolete MONDO:0000140)","termid":"MONDO:0000140","xrefs":{"Monarch":{"xref_id":"0000140"}}}


id: PBO:0066913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 214","termid":"PBO:0066913"}


id: GO:1901737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (R)-mevalonic acid.","definition_xrefs":["GOC:yaf","UniPathway:UPA00058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"(R)-mevalonic acid metabolic process","termid":"GO:1901735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"(R)-mevalonic acid biosynthetic process","synonyms":[{"name":"(R)-mevalonate anabolism","type":"exact"},{"name":"(R)-mevalonate biosynthesis","type":"exact"},{"name":"(R)-mevalonate synthesis","type":"exact"},{"name":"(R)-mevalonic acid anabolism","type":"exact"},{"name":"(R)-mevalonic acid biosynthesis","type":"exact"},{"name":"(R)-mevalonic acid formation","type":"exact"},{"name":"(R)-mevalonic acid synthesis","type":"exact"}],"termid":"GO:1901737"}


id: PBO:0047229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member A","termid":"PBO:0047229"}


id: GO:0004969
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with histamine to initiate a change in cell activity. Histamine is a physiologically active amine, found in plant and animal tissue and released from mast cells as part of an allergic reaction in humans.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"histamine receptor activity","termid":"GO:0004969"}


id: MONDO:0005213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma involving a uterus.","definition_xrefs":["MONDO:patterns/carcinoma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine cancer","termid":"MONDO:0002715"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine carcinoma","secondary_identifiers":["MEDGEN:755620","SCTID:446022000","UMLS:C2960452","EFO:0002919"],"synonyms":[{"name":"carcinoma of uterus","type":"exact"},{"name":"uterus carcinoma","type":"exact"}],"termid":"MONDO:0005213","xrefs":{"Monarch":{"xref_id":"0005213"}}}


id: FYECO:0000181
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glucose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ glucose","termid":"FYECO:0000181"}


id: PBO:0061141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 nucleoside diphosphate kinase 4","termid":"PBO:0061141"}


id: PBO:0078199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-1","termid":"PBO:0078199"}


id: _global:has_output
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p has output c iff c is a participant in p, c is present at the end of p, and c is not present in the same state at the beginning of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_participant","termid":"_global:has_participant"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_output","secondary_identifiers":["RO:0002234"],"termid":"_global:has_output"}


id: PBO:0074961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-3","termid":"PBO:0074961"}


id: GO:0018429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of copper into a 4Cu-S copper-sulfur cluster via heptakis-L-histidino tetracopper mu4-sulfide hydroxide.","definition_xrefs":["RESID:AA0298"],"gene_count":0,"genotype_count":0,"name":"obsolete copper incorporation into copper-sulfur cluster via heptakis-L-histidino tetracopper mu4-sulfide hydroxide (obsolete GO:0018429)","synonyms":[{"name":"copper incorporation into copper-sulphur cluster via heptakis-L-histidino tetracopper mu4-sulphide hydroxide","type":"exact"}],"termid":"GO:0018429"}


id: PR:Q874R3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase-promoting complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11932:SF5","PRO:DNx","OMA:SCHPO03086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.04","secondary_identifiers":["UniProtKB:Q874R3"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ANAPC2","type":"exact"}],"termid":"PR:Q874R3"}


id: PBO:0110397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT5 pseudogene 1","termid":"PBO:0110397"}


id: PBO:0052963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynureninase pseudogene 3","termid":"PBO:0052963"}


id: PBO:0043651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 8 pseudogene 1","termid":"PBO:0043651"}


id: PBO:0026846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_binucleate_septated_cell","termid":"PBO:0026846"}


id: PBO:0028453
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multinucleate_cell","termid":"PBO:0028453"}


id: GO:0030326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the limb are generated and organized. A limb is an appendage of an animal used for locomotion or grasping.","definition_xrefs":["ISBN:0395825172","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limb morphogenesis","termid":"GO:0035108"},{"relation_name":"is_a","term_name":"embryonic appendage morphogenesis","termid":"GO:0035113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic limb morphogenesis","termid":"GO:0030326"}


id: PATO:0000744
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000744 balance value (obsolete PATO:0000744)","termid":"PATO:0000744"}


id: MONDO:0003615
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020730"}]},"cv_name":"mondo","definition":"Any nerve disorder caused by the entrapment and compression of a nerve.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"nerve compression syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:266933","MESH:D009408","DOID:573","NCIT:C27221","SCTID:45781009","UMLS:C1510429","EFO:0009487"],"synonyms":[{"name":"compression neuropathy","type":"exact"},{"name":"entrapment neuropathy","type":"exact"},{"name":"peripheral nerve entrapment syndrome","type":"exact"}],"termid":"MONDO:0003615","terms_by_termid":{"MONDO:0020730":null},"xrefs":{"Monarch":{"xref_id":"0003615"}}}


id: PBO:0074592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 6","termid":"PBO:0074592"}


id: FYPO:0004019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial electron transport from succinate to ubiquinone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular respiration","termid":"FYPO:0000566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal mitochondrial electron transport, succinate to ubiquinone","synonyms":[{"name":"normal mitochondrial electron transport, succinate to ubiquinone, during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial electron transport, succinate to ubiquinone, during vegetative growth","type":"exact"},{"name":"normal succinate cytochrome c oxidoreductase","type":"related"},{"name":"normal succinate dehydrogenase (ubiquinone) activity and ubiquinol-cytochrome-c reductase activity","type":"related"}],"termid":"FYPO:0004019"}


id: MONDO:0020324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intravascular large B-cell lymphoma (IVLBCL) is a very rare form of diffuse large B-cell lymphoma characterized by the selective growth of lymphoma cells within the lumina of small blood vessels (especially the capillaries) that most often presents with a wide range of clinical manifestations (as potentially any tissue can be involved), with patients from Western countries more frequently manifesting with neurological and cutaneous symptoms while patients from Asian countries more frequently displaying hepatosplenomegaly and thrombocytopenia. IVLBCL is characterized by an absence of lymphadenopathy, an aggressive clinical course and a poor prognosis.","definition_xrefs":["Orphanet:98839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"intravascular large B-cell lymphoma","secondary_identifiers":["ICD9:202.80","ONCOTREE:IVBCL","DOID:0081311","MEDGEN:90821","GARD:19590","icd11.foundation:952730197","MedDRA:10069643","UMLS:C0334660","NCIT:C4342","ICDO:9712/3","SCTID:255102004"],"synonyms":[{"name":"IVBCL","type":"related"},{"name":"Tappeiner-Pfleger disease","type":"exact"},{"name":"angioendotheliomatosis proliferans systemisata","type":"exact"},{"name":"angiotropic large cell lymphoma","type":"exact"},{"name":"angiotropic lymphoma","type":"exact"},{"name":"intravascular B-cell lymphoma","type":"exact"},{"name":"intravascular large B-cell lymphoma","type":"exact"},{"name":"intravascular lymphomatosis","type":"exact"},{"name":"malignant angioendotheliomatosis","type":"exact"}],"termid":"MONDO:0020324","xrefs":{"Monarch":{"xref_id":"0020324"}}}


id: PBO:0048056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 5","termid":"PBO:0048056"}


id: GO:0034166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to toll-like receptor 10.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface toll-like receptor signaling pathway","termid":"GO:0140895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 10 signaling pathway","secondary_identifiers":["Reactome:R-HSA-168142"],"synonyms":[{"name":"TLR10 signaling pathway","type":"exact"},{"name":"toll-like receptor 10 signalling pathway","type":"exact"}],"termid":"GO:0034166"}


id: GO:0009472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c3 (tetraheme) (obsolete GO:0009472)","synonyms":[{"name":"cytochrome c3 (tetraheme)","type":"exact"}],"termid":"GO:0009472"}


id: GO:0005283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + Na+(out) = amino acid(in) + Na+(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:monoatomic cation symporter activity","termid":"GO:0005416"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"amino acid:sodium symporter activity","secondary_identifiers":["GO:0005284","GO:0005285"],"synonyms":[{"name":"glutamate/aspartate:sodium symporter activity","type":"narrow"},{"name":"insulin-activated sodium/amino acid transporter activity","type":"narrow"},{"name":"insulin-activated sodium:amino acid symporter activity","type":"narrow"},{"name":"insulin-activated sodium:amino acid transporter activity","type":"narrow"},{"name":"isoleucine/valine:sodium symporter activity","type":"narrow"},{"name":"sodium/amino acid transporter activity","type":"broad"},{"name":"sodium/excitatory amino acid cotransporter activity","type":"broad"},{"name":"sodium/excitatory amino acid symporter activity","type":"exact"},{"name":"sodium:amino acid symporter activity","type":"exact"},{"name":"sodium:amino acid transporter activity","type":"broad"},{"name":"threonine/serine:sodium symporter activity","type":"narrow"}],"termid":"GO:0005283"}


id: GO:0030248
data:
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id: MONDO:0015015
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id: GO:0015665
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id: PBO:0012265
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id: GO:0033549
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id: PBO:0053422
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id: PBO:0067672
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id: FYPO:0006644
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id: MONDO:1010115
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"C8 deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"c8 deficiency, non-human animal","secondary_identifiers":["OMIA:000156"],"termid":"MONDO:1010115","xrefs":{"Monarch":{"xref_id":"1010115"}}}


id: PBO:0068155
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id: PBO:0057472
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id: GO:0009684
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id: PBO:0063452
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id: MONDO:0000958
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuroretinitis is an inflammation of the neural retina and optic nerve. Pathology: Direct invasion or autoimmune activation against the optic nerve may cause optic nerve vascular inflammation with secondary inflammation and edema in the nerve fiber layer of the retina.","direct_ancestors":[{"relation_name":"is_a","term_name":"neuritis","termid":"MONDO:0002122"},{"relation_name":"is_a","term_name":"retinal nerve fiber layer disorder","termid":"MONDO:0003579"},{"relation_name":"is_a","term_name":"optic papillitis","termid":"MONDO:0006879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005244"],"is_obsolete":false,"name":"neuroretinitis","secondary_identifiers":["icd11.foundation:418437487","UMLS:C0154874","MEDGEN:57826","ICD9:363.05","MESH:D012173","DOID:10176"],"synonyms":[{"name":"Juxtapapillary focal retinitis and retinochoroiditis","type":"narrow"},{"name":"focal retinitis and retinochoroiditis, juxtapapillary","type":"narrow"},{"name":"papilloretinitis","type":"narrow"}],"termid":"MONDO:0000958","xrefs":{"Monarch":{"xref_id":"0000958"}}}


id: PBO:0001031
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id: MONDO:0957993
data:
  {"annotated_genes":["SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86392],"is_not":false,"summary":null,"term":"MONDO:0957993"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005336","MONDO:0004069","MONDO:0002320"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial dna deletions, autosomal recessive 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5882731","MEDGEN:1847098","OMIM:620647"],"termid":"MONDO:0957993","terms_by_termid":{"MONDO:0957993":null},"xrefs":{"Monarch":{"xref_id":"0957993"}}}


id: GO:0005951
data:
  {"annotated_genes":["SJAG_00392","SJAG_00412"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70679,106880],"is_not":false,"summary":null,"term":"GO:0005951"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the formation of carbamoyl phosphate; comprises a small subunit that binds and cleaves glutamine, and a large subunit that accepts the ammonia group cleaved from glutamine, binds all of the remaining substrates and effectors, and carries out all of the other catalytic events.","definition_xrefs":["PMID:8626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"carbamoyl-phosphate synthase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"arginine-specific carbamoyl phosphate synthetase complex","type":"narrow"},{"name":"carbamoyl phosphate synthase complex","type":"exact"},{"name":"carbamoyl-phosphate synthase arginine-specific complex","type":"narrow"}],"termid":"GO:0005951","terms_by_termid":{"GO:0005951":null}}


id: GO:0051332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following G1, during which DNA synthesis takes place as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S phase","termid":"GO:0051320"},{"relation_name":"part_of","term_name":"meiotic interphase","termid":"GO:0051328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051328"}],"interesting_parent_ids":["GO:0051328","GO:0008150"],"is_obsolete":false,"name":"meiotic S phase","synonyms":[{"name":"S phase of meiotic cell cycle","type":"exact"},{"name":"S-phase of meiotic cell cycle","type":"exact"},{"name":"premeiotic S-phase","type":"exact"}],"termid":"GO:0051332"}


id: PR:O74806
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidyl-tRNA hydrolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-tRNA hydrolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.15c","secondary_identifiers":["UniProtKB:O74806"],"synonyms":[{"name":"PTH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PTRH1","type":"exact"}],"termid":"PR:O74806"}


id: PBO:0046362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH domain containing 1","termid":"PBO:0046362"}


id: PBO:0049439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 16","termid":"PBO:0049439"}


id: PBO:0060353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO18B antisense RNA 1","termid":"PBO:0060353"}


id: PBO:0079783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A4","termid":"PBO:0079783"}


id: GO:0006229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dUTP, deoxyuridine (5'-)triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate biosynthetic process","termid":"GO:0009212"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dUTP metabolic process","termid":"GO:0046080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dUTP biosynthetic process","synonyms":[{"name":"dUTP anabolism","type":"exact"},{"name":"dUTP biosynthesis","type":"exact"},{"name":"dUTP formation","type":"exact"},{"name":"dUTP synthesis","type":"exact"}],"termid":"GO:0006229"}


id: PBO:0031496
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_methyl_methanesulfonate","termid":"PBO:0031496"}


id: GO:0060738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell where it is interpreted and contributes to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial-mesenchymal cell signaling","termid":"GO:0060684"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"epithelial-mesenchymal signaling involved in prostate gland development","synonyms":[{"name":"epithelial-mesenchymal signalling involved in prostate gland development","type":"exact"}],"termid":"GO:0060738"}


id: PR:O74959
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A retinol dehydrogenase 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C736.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.13","secondary_identifiers":["UniProtKB:O74959"],"synonyms":[{"name":"Spom972h-RDH13","type":"exact"}],"termid":"PR:O74959"}


id: GO:0005656
data:
  {"annotated_genes":["SJAG_02348","SJAG_05301","SJAG_02800","SJAG_00857","SJAG_01354","SJAG_03927","SJAG_00884","SJAG_02394","SJAG_04210","SJAG_02607","SJAG_01267","SJAG_01762","SJAG_02074","SJAG_04062","SJAG_03451"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57178,58462,61155,61379,62847,66342,72058,74144,103659,108194,108414,110931,111760,112017,113557],"is_not":false,"summary":null,"term":"GO:0005656"}]},"cv_name":"cellular_component","definition":"A protein-DNA complex assembled at eukaryotic DNA replication origins during late mitosis and G1, allowing the origin to become competent, or 'licensed', for replication. The complex normally includes the origin recognition complex (ORC), Cdc6, Cdt1 and the MiniChromosome Maintenance (Mcm2-7) proteins.","definition_xrefs":["PMID:15222894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex","termid":"GO:0036387"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01762":null,"SJAG_02074":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_02800":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_04062":null,"SJAG_04210":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"nuclear pre-replicative complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"eukaryotic pre-replicative complex","type":"exact"},{"name":"pre-RC","type":"related"},{"name":"pre-replicative complex","type":"broad"}],"termid":"GO:0005656","terms_by_termid":{"GO:0005656":null}}


id: PBO:0042693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxyl ester lipase","termid":"PBO:0042693"}


id: PBO:0042711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin EGF LAG seven-pass G-type receptor 2","termid":"PBO:0042711"}


id: GO:0034698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gonadotropin stimulus.","definition_xrefs":["GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to gonadotropin","synonyms":[{"name":"response to gonadotropin stimulus","type":"exact"}],"termid":"GO:0034698"}


id: GO:0003709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to initiate or regulate RNA polymerase III transcription.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III transcription factor activity (obsolete GO:0003709)","synonyms":[{"name":"RNA polymerase III transcription factor activity","type":"exact"}],"termid":"GO:0003709"}


id: PBO:0075614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted phosphoprotein 2","termid":"PBO:0075614"}


id: PR:Q9P7L5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ornithine aminotransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03865","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine aminotransferase car2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.08c","secondary_identifiers":["UniProtKB:Q9P7L5"],"synonyms":[{"name":"Spom972h-OAT","type":"exact"},{"name":"ornithine--oxo-acid aminotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7L5"}


id: GO:0047504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-menthol + NADP+ = (2S,5R)-menthone + H+ + NADPH.","definition_xrefs":["EC:1.1.1.207","RHEA:13917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"(-)-menthol dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r1182","KEGG_REACTION:R02177","MetaCyc:--MENTHOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(-)-menthol:NADP+ oxidoreductase activity","type":"related"},{"name":"monoterpenoid dehydrogenase activity","type":"broad"}],"termid":"GO:0047504"}


id: MONDO:0013225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital generalized lipodystrophy in which the cause of the disease is a mutation in the CAVIN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"excluded_subClassOf","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"congenital generalized lipodystrophy","termid":"MONDO:0006536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"congenital generalized lipodystrophy type 4","secondary_identifiers":["MEDGEN:412871","MESH:C567642","OMIM:613327","Orphanet:228429","UMLS:C2750069","DOID:0111138","GARD:10937"],"synonyms":[{"name":"BSCL4","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy type 4 with muscular dystrophy","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy, type 4, with muscular dystrophy","type":"related"},{"name":"CAVIN1 congenital generalised lipodystrophy (disease)","type":"exact"},{"name":"CAVIN1 congenital generalized lipodystrophy (disease)","type":"exact"},{"name":"CGL4","type":"exact"},{"name":"GCL4","type":"exact"},{"name":"congenital generalised lipodystrophy (disease) caused by mutation in CAVIN1","type":"exact"},{"name":"congenital generalized lipodystrophy (disease) caused by mutation in CAVIN1","type":"exact"},{"name":"generalised congenital lipodystrophy type 4","type":"exact"},{"name":"generalised congenital lipodystrophy with myopathy","type":"exact"},{"name":"generalized congenital lipodystrophy type 4","type":"exact"},{"name":"generalized congenital lipodystrophy with myopathy","type":"exact"},{"name":"lipodystrophy, Berardinelli-Seip congenital, type 4, with muscular dystrophy","type":"related"},{"name":"lipodystrophy, congenital generalized, type 4","type":"related"}],"termid":"MONDO:0013225","xrefs":{"Monarch":{"xref_id":"0013225"}}}


id: MONDO:0012671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"essential tremor","termid":"MONDO:0003233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, hereditary essential, 3","secondary_identifiers":["OMIM:611456","DOID:0111430","UMLS:C1969617","MESH:C566949","MEDGEN:409870"],"synonyms":[{"name":"ETM3","type":"exact"},{"name":"essential tremor, hereditary, 3","type":"exact"},{"name":"tremor, hereditary essential, 3","type":"exact"}],"termid":"MONDO:0012671","xrefs":{"Monarch":{"xref_id":"0012671"}}}


id: PBO:0043864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crumbs cell polarity complex component 2","termid":"PBO:0043864"}


id: PBO:0048248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 12I","termid":"PBO:0048248"}


id: PBO:0082570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Checkpoint protein; involved in the activation of the DNA damage and meiotic pachytene checkpoints; with Mec3p and Ddc1p, forms a clamp that is loaded onto partial duplex DNA; homolog of human and S. pombe Rad1 and U. maydis Rec1 proteins","termid":"PBO:0082570"}


id: PBO:0085462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted protein kinase; negatively regulates the hexosamine biosynthetic pathway (HBP), which converts fructose-6-phosphate into UDP-N-acetylglucosamine, a precursor of chitin biosynthesis, GPI-anchor formation and glycosylation; interacts genetically with GFA1, encoding the first enzyme in the HBP; involved in Gfa1p phosphorylation (S332, T334); contains a Pho85p-regulated SCF-CDC4 phosphodegron; unstable, cell cycle regulated protein, peaking at G1/S","termid":"PBO:0085462"}


id: PBO:0066158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP8 pseudogene 1","termid":"PBO:0066158"}


id: PBO:0075192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 4","termid":"PBO:0075192"}


id: PBO:0048948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic-oxaloacetic transaminase 1 like 1","termid":"PBO:0048948"}


id: GO:0043661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane that surrounds one or more bacteroids (such as nitrogen-fixing bacteroids within legume root nodule cells).","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle membrane","termid":"GO:0030666"},{"relation_name":"part_of","term_name":"bacteroid-containing symbiosome","termid":"GO:0043660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"peribacteroid membrane","termid":"GO:0043661"}


id: PBO:0117388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like domain 6, lysophospholipase","termid":"PBO:0117388"}


id: PBO:0073425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3a subunit 1","termid":"PBO:0073425"}


id: PBO:0065597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 13","termid":"PBO:0065597"}


id: MONDO:0006947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"High blood pressure secondary to renal artery stenosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal hypertension","termid":"MONDO:0001105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renovascular hypertension","secondary_identifiers":["NANDO:2200141","HP:0100817","ICD9:405.91","MEDGEN:43786","SCTID:123799005","DOID:1591","NANDO:2100016","EFO:1001153","ICD10CM:I15.0","UMLS:C0020545"],"synonyms":[{"name":"renovascular hypertension","type":"exact"},{"name":"renovascular hypertension (disease)","type":"exact"}],"termid":"MONDO:0006947","xrefs":{"Monarch":{"xref_id":"0006947"}}}


id: PBO:0117114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTAD2 antisense RNA 1","termid":"PBO:0117114"}


id: PBO:0082087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase; synthesizes PRPP, which is required for nucleotide, histidine, and tryptophan biosynthesis; plays a key role in cell wall integrity (CWI) pathway; one of five related enzymes, which are active as heteromultimeric complexes; missense mutations in human homolog PRPS1 are associated with neuropathic Arts syndrome and Charcot-Marie Tooth (CMTX5) disease","termid":"PBO:0082087"}


id: MONDO:0024568
data:
  {"annotated_genes":["SJAG_02015"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86256],"is_not":false,"summary":null,"term":"MONDO:0024568"}]},"cv_name":"mondo","definition":"Any infantile liver failure in which the cause of the disease is a mutation in the LARS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infantile liver failure","termid":"MONDO:0000023"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02015":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"infantile liver failure syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3809522","MEDGEN:815852","OMIM:615438","GARD:13114","DOID:0080717","Orphanet:370088"],"synonyms":[{"name":"ILFS1","type":"related"},{"name":"LARS infantile liver failure","type":"exact"},{"name":"Lars infantile liver failure","type":"exact"},{"name":"acute infantile liver failure - multisystemic involvement syndrome","type":"related"},{"name":"infantile liver failure caused by mutation in LARS","type":"exact"},{"name":"infantile liver failure caused by mutation in Lars","type":"exact"},{"name":"infantile liver failure syndrome 1","type":"exact"},{"name":"infantile liver failure syndrome type 1","type":"exact"}],"termid":"MONDO:0024568","terms_by_termid":{"MONDO:0024568":null},"xrefs":{"Monarch":{"xref_id":"0024568"}}}


id: GO:0050565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N2-citryl-N6-acetyl-N6-hydroxy-L-lysine + N6-acetyl-N6-hydroxy-L-lysine = aerobactin + AMP + diphosphate + H+.","definition_xrefs":["RHEA:32167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"aerobactin synthase activity","synonyms":[{"name":"citrate:6-N-acetyl-6-N-hydroxy-L-lysine ligase (ADP-forming)","type":"exact"},{"name":"citrate:N6-acetyl-N6-hydroxy-L-lysine ligase (ADP-forming)","type":"exact"}],"termid":"GO:0050565"}


id: GO:0048649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individuals, having the potential to develop any of several distinct developmental paths, have their individual developmental fate determined in response to genetic cues. Individuals with distinct developmental fates perform different functions in a colony of social insects.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"caste determination","termid":"GO:0048648"},{"relation_name":"is_a","term_name":"polyphenic determination, influence by genetic factors","termid":"GO:0048652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caste determination, influence by genetic factors","termid":"GO:0048649"}


id: PBO:0040709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 like 14","termid":"PBO:0040709"}


id: GO:1904912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of RNA localization to telomere.","definition_xrefs":["PMID:26586433","GO_REF:0000058","GOC:BHF","GOC:rph","GOC:BHF_telomere","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of establishment of RNA localization to telomere","termid":"GO:1904910"},{"relation_name":"positively_regulates","term_name":"establishment of RNA localization to telomere","termid":"GO:0097694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of establishment of RNA localization to telomere","synonyms":[{"name":"activation of establishment of RNA localisation to telomere","type":"narrow"},{"name":"activation of establishment of RNA localization to telomere","type":"narrow"},{"name":"positive regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"up-regulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"up-regulation of establishment of RNA localization to telomere","type":"exact"},{"name":"upregulation of establishment of RNA localisation to telomere","type":"exact"},{"name":"upregulation of establishment of RNA localization to telomere","type":"exact"}],"termid":"GO:1904912"}


id: MOD:00056
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to N-acetyl-L-isoleucine.","definition_xrefs":["PubMed:8034631","RESID:AA0047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-isoleucine","synonyms":[{"name":"(2S,3S)-2-acetamido-3-methylpentanoic acid","type":"exact"},{"name":"2-acetylamino-3-methylpentanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-methylpentanoic acid","type":"exact"},{"name":"AcIle","type":"exact"},{"name":"N-acetyl-L-isoleucine","type":"exact"},{"name":"N-acetylated L-isoleucine","type":"exact"},{"name":"acetylisoleucine","type":"exact"}],"termid":"MOD:00056"}


id: GO:0003963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA 3'-terminal-phosphate = AMP + diphosphate + RNA terminal-2',3'-cyclic-phosphate.","definition_xrefs":["EC:6.5.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"ligase activity, forming phosphoric ester bonds","termid":"GO:0016886"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0009975","GO:0003824","GO:0016874","GO:0140098"],"is_obsolete":false,"name":"RNA-3'-phosphate cyclase activity","secondary_identifiers":["MetaCyc:RNA-3-PHOSPHATE-CYCLASE-RXN","RHEA:23976"],"synonyms":[{"name":"RNA 3'-terminal phosphate cyclase activity","type":"related"},{"name":"RNA cyclase activity","type":"related"},{"name":"RNA-3'-phosphate:RNA ligase (cyclizing, AMP-forming)","type":"related"}],"termid":"GO:0003963"}


id: SO:0000461
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal deletion whereby a chromosome generated by recombination between two inversions; has a deficiency at each end of the inversion.","definition_xrefs":["FB:km"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_deletion","termid":"SO:1000029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_derived_bipartite_deficiency","synonyms":[{"name":"inversion derived bipartite deficiency","type":"exact"}],"termid":"SO:0000461"}


id: PBO:0110243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex histone fold subunit Php5","termid":"PBO:0110243"}


id: PBO:0066625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIC8 guanine nucleotide exchange factor B","termid":"PBO:0066625"}


id: GO:0002730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated immunity","termid":"GO:0002703"},{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"regulates","term_name":"dendritic cell cytokine production","termid":"GO:0002371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of dendritic cell cytokine production","termid":"GO:0002730"}


id: FYPO:0004772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-histidine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular histidine level","termid":"FYPO:0001567"},{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased vacuolar histidine level","synonyms":[{"name":"increased level of histidine in vacuole","type":"exact"},{"name":"increased vacuolar L-histidine level","type":"exact"},{"name":"increased vacuolar histidine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar histidine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004772"}


id: PBO:0065360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine aminotransferase 1 pseudogene 1","termid":"PBO:0065360"}


id: MONDO:0020101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A group of inherited hemolytic anemias caused by erythrocyte membrane defects. This includes hereditary pyropoikilocytosis, hereditary spherocytosis and hereditary elliptocytosis.","definition_xrefs":["NCIT:C101218"],"gene_count":0,"genotype_count":0,"name":"obsolete constitutional hemolytic anemia due to membrane defect (obsolete MONDO:0020101)","secondary_identifiers":["SCTID:111575000","Orphanet:98364"],"synonyms":[{"name":"anemia due to membrane defect","type":"exact"},{"name":"hemolytic anemia due to erythrocyte membrane defect","type":"exact"},{"name":"hemolytic anemia due to membrane defect","type":"exact"},{"name":"rare constitutional hemolytic anemia due to a red cell membrane anomaly","type":"exact"}],"termid":"MONDO:0020101","xrefs":{"Monarch":{"xref_id":"0020101"}}}


id: GO:0140145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of copper ions out of the vacuole across the vacuolar membrane.","definition_xrefs":["PMID:12244050","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"copper ion export from vacuole","termid":"GO:0140145"}


id: PBO:0042630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 5 pseudogene","termid":"PBO:0042630"}


id: MONDO:1011978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central retinal degeneration, non-human animal","secondary_identifiers":["OMIA:000867"],"termid":"MONDO:1011978","xrefs":{"Monarch":{"xref_id":"1011978"}}}


id: FYPO:0004096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cytoskeleton is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to cytoskeleton","synonyms":[{"name":"normal protein localisation to cytoskeleton","type":"exact"}],"termid":"FYPO:0004096"}


id: GO:0090229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of red or far-red light signaling pathway","termid":"GO:0090227"},{"relation_name":"negatively_regulates","term_name":"red or far-red light signaling pathway","termid":"GO:0010017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of red or far-red light signaling pathway","synonyms":[{"name":"negative regulation of phytochrome signaling pathway","type":"exact"},{"name":"negative regulation of red or far-red light signalling pathway","type":"exact"}],"termid":"GO:0090229"}


id: GO:0045496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the analia of the male over time, from formation to the mature structure. The analia is the posterior-most vertral appendage that develops from the genital disc. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11494318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"analia development","termid":"GO:0007487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male analia development","termid":"GO:0045496"}


id: PBO:0055096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2514","termid":"PBO:0055096"}


id: FYPO:0007754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which phase II of mitotic spindle assembly does not occur. During phase II, the spindle is normally maintained at a constant length during mitotic metaphase.","definition_xrefs":["PomBase:mah","PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished mitotic spindle assembly","termid":"FYPO:0001683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000337","FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000641"],"is_obsolete":false,"name":"abolished mitotic spindle formation phase II","synonyms":[{"name":"abnormal mitotic spindle formation, without spindle phase II","type":"exact"},{"name":"abolished mitotic spindle assembly phase II","type":"exact"},{"name":"abolished mitotic spindle formation (spindle phase two)","type":"exact"}],"termid":"FYPO:0007754"}


id: PBO:0073373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTAD4 antisense RNA 1","termid":"PBO:0073373"}


id: PBO:0079497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin interacting protein","termid":"PBO:0079497"}


id: MONDO:0021197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease by cellular component affected (obsolete MONDO:0021197)","termid":"MONDO:0021197","xrefs":{"Monarch":{"xref_id":"0021197"}}}


id: GO:0052149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in host peptidase activity, the catalysis of the hydrolysis of peptide bonds in a protein. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host peptidase activity (obsolete GO:0052149)","synonyms":[{"name":"modulation by symbiont of host protease activity","type":"narrow"}],"termid":"GO:0052149"}


id: GO:0120079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of microfilament motor activity.","definition_xrefs":["PMID:8621557","GOC:mah","PMID:20705471"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microfilament motor activity (obsolete GO:0120079)","synonyms":[{"name":"regulation of actin filament motor activity","type":"exact"},{"name":"regulation of actin-activated ATPase activity","type":"related"},{"name":"regulation of actin-dependent ATPase activity","type":"related"},{"name":"regulation of actin-filament motor activity","type":"exact"},{"name":"regulation of muscle motor activity","type":"narrow"},{"name":"regulation of myosin ATPase activity","type":"related"}],"termid":"GO:0120079"}


id: PR:Q7LKX0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1639.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7LKX0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation of fatty acids protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1639.01c","synonyms":[{"name":"3-keto acyl-CoA synthase SPAC1639.01c (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC1639.01c","type":"exact"},{"name":"very-long-chain 3-oxoacyl-CoA synthase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q7LKX0"}


id: PBO:0042674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 8","termid":"PBO:0042674"}


id: GO:0033695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces a quinone or similar acceptor molecule.","definition_xrefs":["GOC:mah","EC:1.17.5.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor","termid":"GO:0033695"}


id: GO:0120542
data:
  {"annotated_genes":["SJAG_03822","SJAG_03370","SJAG_01414","SJAG_00240"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99063,99064,115002,115003],"is_not":false,"summary":null,"term":"GO:0120542"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ethanol + NAD+ = acetaldehyde + NADH + H+.","definition_xrefs":["RHEA:25290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_03370":null,"SJAG_03822":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"ethanol dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120542","terms_by_termid":{"GO:0120542":null}}


id: MONDO:0000860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neural tube defect (obsolete MONDO:0000860)","termid":"MONDO:0000860","xrefs":{"Monarch":{"xref_id":"0000860"}}}


id: PBO:0051723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin receptor related receptor","termid":"PBO:0051723"}


id: FYPO:0000651
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of septum assembly is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum assembly","termid":"FYPO:0000117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"increased duration of septum assembly","secondary_identifiers":["FYPO:0000649"],"synonyms":[{"name":"increased division septum formation involved in mitotic cytokinesis","type":"related"},{"name":"increased duration of division septum assembly","type":"exact"},{"name":"increased duration of division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"increased duration of septation","type":"broad"},{"name":"increased duration of septum assembly during mitotic cell cycle","type":"related"},{"name":"increased duration of septum assembly during vegetative growth","type":"exact"},{"name":"increased duration of septum formation","type":"broad"},{"name":"increased septation","type":"related"},{"name":"increased septum formation","type":"related"},{"name":"prolonged septum assembly","type":"exact"}],"termid":"FYPO:0000651"}


id: PR:Q09749
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adiponectin receptor protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03283","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADIPOR-like receptor SPBC12C2.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.09c","secondary_identifiers":["UniProtKB:Q09749"],"synonyms":[{"name":"Spom972h-ADIPOR2","type":"exact"}],"termid":"PR:Q09749"}


id: GO:0150019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a basal dendrite are generated and organized.","definition_xrefs":["GOC:aruk","PMID:22683681","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite morphogenesis","termid":"GO:0048813"},{"relation_name":"part_of","term_name":"basal dendrite development","termid":"GO:0150018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basal dendrite morphogenesis","termid":"GO:0150019"}


id: PBO:0004537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocitrate synthase (predicted)","termid":"PBO:0004537"}


id: MONDO:0030785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 75, with neuropsychiatric features and variant lissencephaly","secondary_identifiers":["DOID:0081234","MEDGEN:1808159","UMLS:C5676961","OMIM:619827"],"synonyms":[{"name":"MRT75","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 75, with neuropsychiatric features and variant lissencephaly","type":"exact"}],"termid":"MONDO:0030785","xrefs":{"Monarch":{"xref_id":"0030785"}}}


id: MONDO:0044987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the face.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete face disorder (obsolete MONDO:0044987)","secondary_identifiers":["SCTID:118930001"],"synonyms":[{"name":"disease of face","type":"exact"},{"name":"disease or disorder of face","type":"exact"},{"name":"disorder of face","type":"exact"},{"name":"face disease","type":"exact"},{"name":"face disease or disorder","type":"exact"}],"termid":"MONDO:0044987","xrefs":{"Monarch":{"xref_id":"0044987"}}}


id: PBO:0067022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 35, pseudogene","termid":"PBO:0067022"}


id: PBO:0060709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 6","termid":"PBO:0060709"}


id: GO:0060955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of neural crest cells to cardiac glial cell fates and their capacity to differentiate into cardiac glial cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac glial cell fate commitment","termid":"GO:0060953"},{"relation_name":"part_of","term_name":"neural crest-derived cardiac glial cell differentiation","termid":"GO:0060951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest-derived cardiac glial cell fate commitment","termid":"GO:0060955"}


id: MONDO:0011520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 2","secondary_identifiers":["UMLS:C1854577","MEDGEN:343159","OMIM:605218"],"synonyms":[{"name":"SLEB2","type":"exact"},{"name":"susceptibility to systemic lupus erythematosus 2","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 2","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0011520","xrefs":{"Monarch":{"xref_id":"0011520"}}}


id: MONDO:0036870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm arising from the lymphatic vessels.","definition_xrefs":["NCIT:C3723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"},{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphatic vessel neoplasm","secondary_identifiers":["MEDGEN:64616","UMLS:C0206619"],"synonyms":[{"name":"lymph vessel neoplasm","type":"exact"},{"name":"lymph vessel tumor","type":"exact"},{"name":"lymph vessel tumour","type":"exact"},{"name":"lymphatic vessel neoplasm","type":"exact"},{"name":"lymphatic vessel tumor","type":"exact"},{"name":"lymphatic vessel tumour","type":"exact"},{"name":"neoplasm of lymph vessel","type":"exact"},{"name":"neoplasm of lymphatic vessel","type":"exact"},{"name":"neoplasm of the lymph vessel","type":"exact"},{"name":"neoplasm of the lymphatic vessel","type":"exact"},{"name":"tumor of lymph vessel","type":"exact"},{"name":"tumor of lymphatic vessel","type":"exact"},{"name":"tumor of the lymph vessel","type":"exact"},{"name":"tumor of the lymphatic vessel","type":"exact"},{"name":"tumour of lymph vessel","type":"exact"},{"name":"tumour of lymphatic vessel","type":"exact"},{"name":"tumour of the lymph vessel","type":"exact"},{"name":"tumour of the lymphatic vessel","type":"exact"}],"termid":"MONDO:0036870","xrefs":{"Monarch":{"xref_id":"0036870"}}}


id: FYPO:0002869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the site of cell division is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to cell division site","synonyms":[{"name":"decreased protein localisation to cell division site","type":"exact"},{"name":"decreased protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell division site during vegetative growth","type":"exact"},{"name":"decreased protein recruitment to cell division site","type":"related"},{"name":"reduced protein localization to cell division site","type":"exact"}],"termid":"FYPO:0002869"}


id: PBO:0064385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 7","termid":"PBO:0064385"}


id: PBO:0026674
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0026674"}


id: PBO:0055934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 40","termid":"PBO:0055934"}


id: MONDO:0012499
data:
  {"annotated_genes":["SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87594],"is_not":false,"summary":null,"term":"MONDO:0012499"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01007":null},"genotype_count":0,"is_obsolete":false,"name":"Buruli ulcer, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1864868","OMIM:610446","MEDGEN:355851"],"synonyms":[{"name":"BUD","type":"related"},{"name":"Buruli ulcer, susceptibility to","type":"exact"},{"name":"Mycobacterium ulcerans, susceptibility to","type":"related"}],"termid":"MONDO:0012499","terms_by_termid":{"MONDO:0012499":null},"xrefs":{"Monarch":{"xref_id":"0012499"}}}


id: MONDO:0015682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary peritoneal tumor (obsolete MONDO:0015682)","secondary_identifiers":["Orphanet:168803"],"termid":"MONDO:0015682","xrefs":{"Monarch":{"xref_id":"0015682"}}}


id: MONDO:0009846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pentosuria is an inborn error of metabolism which is characterized by the excretion of 1 to 4 g of the pentose L-xylulose in the urine per day.","definition_xrefs":["Orphanet:2843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of pentose phosphate metabolism","termid":"MONDO:0019231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"pentosuria","secondary_identifiers":["UMLS:C0268162","GARD:418","MedDRA:10064170","DOID:0111258","MESH:C536652","MEDGEN:78646","ICD9:271.8","OMIM:260800","SCTID:190764000"],"synonyms":[{"name":"L-Xylulosuria","type":"related"},{"name":"L-xylulose reductase deficiency","type":"related"},{"name":"PNTSU","type":"related"},{"name":"essential pentosuria","type":"exact"},{"name":"pentosuria","type":"exact"},{"name":"xylitol dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0009846","xrefs":{"Monarch":{"xref_id":"0009846"}}}


id: PBO:0057628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1203","termid":"PBO:0057628"}


id: PBO:0029587
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_binding","termid":"PBO:0029587"}


id: GO:0006780
data:
  {"annotated_genes":["SJAG_05283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75133],"is_not":false,"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of uroporphyrinogen III.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound biosynthetic process","termid":"GO:0006779"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"uroporphyrinogen III metabolic process","termid":"GO:0046502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0033013"],"is_obsolete":false,"name":"uroporphyrinogen III biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"uroporphyrinogen III anabolism","type":"exact"},{"name":"uroporphyrinogen III biosynthesis","type":"exact"},{"name":"uroporphyrinogen III formation","type":"exact"},{"name":"uroporphyrinogen III synthesis","type":"exact"}],"termid":"GO:0006780","terms_by_termid":{"GO:0006780":null}}


id: PBO:0076525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 38","termid":"PBO:0076525"}


id: MONDO:0013548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acetyltransferase-2 deficiency","secondary_identifiers":["OMIM:614055","MESH:C536005","UMLS:C0342735","MEDGEN:90995"],"synonyms":[{"name":"ACAT2","type":"related"},{"name":"ACAT2 deficiency, Isolated cases","type":"exact"},{"name":"ACAT2D","type":"related"},{"name":"ACETYL-CoA acetyltransferase-2 deficiency","type":"related"},{"name":"Acat2 deficiency","type":"related"},{"name":"Acetocoenzyme A acetyltransferase 2","type":"related"},{"name":"Acetyl CoA acetyltransferase 2 deficiency","type":"related"},{"name":"acetoacetyl CoA thiolase, cytosolic","type":"related"},{"name":"acetyl-CoA acetyltransferase-2 deficiency","type":"exact"}],"termid":"MONDO:0013548","xrefs":{"Monarch":{"xref_id":"0013548"}}}


id: GO:0102972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A12 + 2-oxoglutarate + O2 = gibberellin A110 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A12,2-oxoglutarate:oxygen oxidoreductase activity (gibberellin A110-forming) (obsolete GO:0102972)","termid":"GO:0102972"}


id: MONDO:0001413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tularemia that results in painful regional lymphadenopathy and an ulcerated skin lesion.","definition_xrefs":["DOID:11990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tularemia","termid":"MONDO:0018077"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulceroglandular tularemia","secondary_identifiers":["ICD9:021.0","UMLS:C0152941","MEDGEN:509087","ICD10CM:A21.0","SCTID:37722001"],"termid":"MONDO:0001413","xrefs":{"Monarch":{"xref_id":"0001413"}}}


id: PBO:0015227
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(2), RING domain-dependent","termid":"PBO:0015227"}


id: MOD:01349
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:320#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolyzed N-ethylmaleimide adduct","termid":"MOD:00631"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"hydrolyzed N-ethylmaleimide cysteine adduct","synonyms":[{"name":"Nethylmaleimide+water","type":"related"},{"name":"Nethylmaleimidehydrolysis","type":"related"}],"termid":"MOD:01349"}


id: MONDO:0006195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign nodular lesion protruding above the surface of the endometrium. It is composed of a fibrous stroma that contains thick-walled blood vessels and dilated endometrial glands. Polypectomy is the treatment of choice. Only few cases with recurrence have been reported.","definition_xrefs":["NCIT:C6433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"},{"relation_name":"is_a","term_name":"uterine polyp","termid":"MONDO:0004701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrial polyp","secondary_identifiers":["MEDGEN:312370","UMLS:C1704273","EFO:1000237"],"synonyms":[{"name":"endometrial polyp","type":"exact"},{"name":"endometrial stromal polyp","type":"exact"},{"name":"endometrium polyp","type":"exact"},{"name":"polyp of endometrium","type":"exact"},{"name":"polyp of the endometrium","type":"exact"},{"name":"polyp, endometrial stromal, benign","type":"exact"}],"termid":"MONDO:0006195","xrefs":{"Monarch":{"xref_id":"0006195"}}}


id: PBO:0086955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of mitochondrial proline metabolism; tethered with Put7p to inner mitochondrial membrane in large hetero-oligomeric complex, abundance of which is regulated by proline; involved in mitochondrial proline homeostasis and cellular redox balance; null exhibits pronounced defect in proline utilization, and can be functionally complemented by expression of human homolog MCUR1","termid":"PBO:0086955"}


id: PBO:0011491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supeoxide dismutase mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0011491"}


id: PBO:0040698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 apoptosis regulator","termid":"PBO:0040698"}


id: PBO:0029089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_spheroid_cell","termid":"PBO:0029089"}


id: PBO:0001472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S5 (predicted)","termid":"PBO:0001472"}


id: PR:O74333
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fhn1 gene.","definition_xrefs":["UniProtKB:O74333","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-classical export protein 2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.13","synonyms":[{"name":"Spom972h-fhn1","type":"exact"}],"termid":"PR:O74333"}


id: MONDO:1011286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leber hereditary optic neuropathy that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber hereditary optic neuropathy, non-human animal","termid":"MONDO:1010358"},{"relation_name":"is_a","term_name":"dilated cardiomyopathy, cattle","termid":"MONDO:1010451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leber hereditary optic neuropathy, cattle","secondary_identifiers":["OMIA:002557-9913"],"termid":"MONDO:1011286","xrefs":{"Monarch":{"xref_id":"1011286"}}}


id: PBO:0049405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 2A","termid":"PBO:0049405"}


id: PR:P87115
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA cytidine acetyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00570","PRO:DNx","PANTHER:PTHR10925:SF5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA cytidine acetyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.09c","secondary_identifiers":["UniProtKB:P87115"],"synonyms":[{"name":"18S rRNA cytosine acetyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NAT10","type":"exact"}],"termid":"PR:P87115"}


id: GO:0038141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric complex containing two monomers of the tyrosine kinase receptor ERBB4 (also called HER4).","definition_xrefs":["PMID:16460914","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"ERBB4-ERBB4 complex","synonyms":[{"name":"ERBB4 homodimer","type":"exact"}],"termid":"GO:0038141"}


id: MONDO:0015757
data:
  {"annotated_genes":["SJAG_00980","SJAG_02460","SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86512,86513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011508"},{"annotations":[87658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic and lymphoid system neoplasm","termid":"MONDO:0002334"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_02460":null,"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"lymphoid hemopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20131","MEDGEN:1842533","Orphanet:171898","UMLS:C5680515"],"termid":"MONDO:0015757","terms_by_termid":{"MONDO:0009693":null,"MONDO:0011508":null},"xrefs":{"Monarch":{"xref_id":"0015757"}}}


id: PBO:0028449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_recombination_at_silent_mating-type_cassette","termid":"PBO:0028449"}


id: MONDO:0016755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intraneural or extraneural neoplasm arising from nerve tissues and neural sheaths. It is composed of perineurial-like fibroblasts and Schwann cells. It usually presents as a localized cutaneous lesion and less often as a circumscribed peripheral nerve mass. Patients with neurofibromatosis type 1 present with multiple masses. Neurofibromas which arise from major nerves and plexiform neurofibromas are precursor lesions to malignant peripheral nerve sheath tumors.","definition_xrefs":["NCIT:C3272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nerve sheath neoplasm","termid":"MONDO:0002547"},{"relation_name":"is_a","term_name":"benign peripheral nerve sheath tumor","termid":"MONDO:0016752"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibroma","secondary_identifiers":["DOID:962","ICD9:215.9","MedDRA:10029267","MESH:D009455","MEDGEN:45058","ONCOTREE:NFIB","ICDO:9540/0","Orphanet:252183","GARD:7191","UMLS:C0027830","icd11.foundation:221014277","SCTID:404029005"],"synonyms":[{"name":"NFIB","type":"related"},{"name":"neurofibroma","type":"exact"},{"name":"neurofibroma (WHO grade I)","type":"exact"},{"name":"neurofibroma, benign","type":"exact"}],"termid":"MONDO:0016755","xrefs":{"Monarch":{"xref_id":"0016755"}}}


id: SO:0000442
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A double stranded oligonucleotide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligo","termid":"SO:0000696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ds_oligo","synonyms":[{"name":"double stranded oligonucleotide","type":"exact"},{"name":"ds oligo","type":"exact"},{"name":"ds-oligonucleotide","type":"exact"}],"termid":"SO:0000442"}


id: PBO:0084185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone demethylase and transcription factor; regulates genes during nutrient limitation; activity modulated by proteasome-mediated proteolysis; has JmjC and JmjN domain in N-terminus that interact, promoting stability and proper transcriptional activity; contains two transactivating domains downstream of Jmj domains and a C-terminal DNA binding domain; relocalizes to the cytosol in response to hypoxia; GIS1 has a paralog, RPH1, that arose from the whole genome duplication","termid":"PBO:0084185"}


id: PATO:0001474
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's axis being positioned forward.","definition_xrefs":["bdid:bdid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anteverted","termid":"PATO:0001474"}


id: GO:0018993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotypes in an organism's soma.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic sex determination","termid":"GO:0018993"}


id: PBO:0002103
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds DRE 5'-NG[GT]T[G/A]-3'","termid":"PBO:0002103"}


id: PBO:0053867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1142","termid":"PBO:0053867"}


id: PBO:0048240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 10","termid":"PBO:0048240"}


id: PBO:0034450
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_meiosis_I","termid":"PBO:0034450"}


id: PBO:0053412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 349","termid":"PBO:0053412"}


id: MONDO:0002720
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that occurs in sella turcica. Representative examples include craniopharyngioma and pituitary gland adenoma.","definition_xrefs":["NCIT:C4944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base neoplasm","termid":"MONDO:0002785"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"sella turcica neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:148188","DOID:3643","UMLS:C0748616","ONCOTREE:SELT"],"synonyms":[{"name":"neoplasm of sella turcica","type":"exact"},{"name":"neoplasm of the sella turcica","type":"exact"},{"name":"sella turcica neoplasm","type":"exact"},{"name":"sella turcica tumor","type":"exact"},{"name":"sella turcica tumour","type":"exact"},{"name":"sellar neoplasm","type":"exact"},{"name":"sellar tumor","type":"exact"},{"name":"sellar tumour","type":"exact"},{"name":"selt","type":"related"},{"name":"tumor of sella turcica","type":"exact"},{"name":"tumor of the sella turcica","type":"exact"},{"name":"tumour of sella turcica","type":"exact"},{"name":"tumour of the sella turcica","type":"exact"}],"termid":"MONDO:0002720","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0002720"}}}


id: PBO:0069349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 609, pseudogene","termid":"PBO:0069349"}


id: PBO:0083983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutamine-fructose-6-phosphate amidotransferase; catalyzes the formation of glucosamine-6-P and glutamate from fructose-6-P and glutamine in the first step of chitin biosynthesis; GFA1 has a paralogous region, comprising ORFs YMR084W-YMR085W, that arose from the whole genome duplication","termid":"PBO:0083983"}


id: PR:O13892
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C20G4.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.08","synonyms":[{"name":"Spom972h-pdc1","type":"exact"}],"termid":"PR:O13892"}


id: PBO:0055391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2821","termid":"PBO:0055391"}


id: PBO:0058499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5692a-2","termid":"PBO:0058499"}


id: GO:0031016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pancreas over time, from its formation to the mature structure. The pancreas is an endoderm derived structure that produces precursors of digestive enzymes and blood glucose regulating hormones.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreas development","secondary_identifiers":["Wikipedia:Pancreas"],"termid":"GO:0031016"}


id: PBO:0091239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zn(2)-C6 fungal-type, truncated","termid":"PBO:0091239"}


id: GO:0061043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of angiogenesis","termid":"GO:0045765"},{"relation_name":"is_a","term_name":"regulation of wound healing","termid":"GO:0061041"},{"relation_name":"regulates","term_name":"vascular wound healing","termid":"GO:0061042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular wound healing","termid":"GO:0061043"}


id: FYPO:0004274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore release from an ascus does not occur.","definition_xrefs":["PomBase:mah","GO:0071998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abolished ascospore release from ascus","synonyms":[{"name":"absent ascospore release from ascus","type":"exact"},{"name":"ascospore release from ascus abolished","type":"exact"}],"termid":"FYPO:0004274"}


id: MONDO:0016345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"restrictive cardiomyopathy","termid":"MONDO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"non-familial restrictive cardiomyopathy","secondary_identifiers":["NANDO:1200294","UMLS:C5680885","GARD:20535","icd11.foundation:2097520643","MEDGEN:1843079","Orphanet:217720"],"termid":"MONDO:0016345","xrefs":{"Monarch":{"xref_id":"0016345"}}}


id: GO:0005260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables passage of a chloride ion through a transmembrane channel that opens when ATP is bound by the channel complex or one of its constituent parts on the intracellular side of the plasma membrane.","definition_xrefs":["PMID:24727426","PMID:9922375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"},{"relation_name":"is_a","term_name":"intracellularly ATP-gated ion channel activity","termid":"GO:0099142"},{"relation_name":"is_a","term_name":"polypeptide conformation or assembly isomerase activity","termid":"GO:0120544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0003824","GO:0016853","GO:0022857"],"is_obsolete":false,"name":"intracellularly ATP-gated chloride channel activity","secondary_identifiers":["MetaCyc:3.6.3.49-RXN","EC:5.6.1.6","GO:0005224","TC:3.A.1.202.1","Wikipedia:Cystic_fibrosis_transmembrane_conductance_regulator"],"synonyms":[{"name":"CFTR","type":"exact"},{"name":"channel-conductance-controlling ATPase activity","type":"related"},{"name":"cystic fibrosis transmembrane conductance regulator","type":"narrow"}],"termid":"GO:0005260"}


id: GO:0030596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing alpha-L-rhamnose residues in alpha-L-rhamnosides.","definition_xrefs":["EC:3.2.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-L-rhamnosidase activity","secondary_identifiers":["KEGG_REACTION:R02436","MetaCyc:3.2.1.40-RXN","RHEA:17465"],"synonyms":[{"name":"alpha-L-rhamnosidase N","type":"related"},{"name":"alpha-L-rhamnosidase T","type":"related"},{"name":"alpha-L-rhamnoside rhamnohydrolase activity","type":"related"}],"termid":"GO:0030596"}


id: PBO:0015706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein blinkin, Spc7","termid":"PBO:0015706"}


id: GO:0033008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of mast cell activation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mast cell activation","termid":"GO:0033005"},{"relation_name":"is_a","term_name":"regulation of mast cell activation involved in immune response","termid":"GO:0033006"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"mast cell activation involved in immune response","termid":"GO:0002279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell activation involved in immune response","synonyms":[{"name":"positive regulation of mast cell activation during immune response","type":"related"}],"termid":"GO:0033008"}


id: PBO:0051988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"janus kinase and microtubule interacting protein 1","termid":"PBO:0051988"}


id: MONDO:0043251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, slow growing, and painless hamartomatous tumor occurring in tooth-bearing areas of the jaws. According to the presence or absence of tooth-like structures, it is classified as complex type or compound type. Odontoma of complex type is characterized by the presence of enamel and dentin and the absence of tooth-like structures. It is treated with local excision. If it is incompletely removed, it may recur. Odontoma of compound type is characterized by the presence of tooth-like structures. It is treated by local excision. Recurrences have not been reported.","definition_xrefs":["NCIT:C3287"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"odontogenic neoplasm","termid":"MONDO:0021192"},{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odontoma","secondary_identifiers":["UMLS:C0028882","ICDO:9280/0","MEDGEN:45181","MESH:D009810"],"synonyms":[{"name":"ameloblastic fibro-odontoma","type":"related"},{"name":"ameloblastic fibro-odontomas","type":"related"},{"name":"compound odontoma","type":"related"},{"name":"compound odontomas","type":"related"},{"name":"fibro odontoma","type":"related"},{"name":"fibro odontoma, ameloblastic","type":"related"},{"name":"fibro-odontoma","type":"exact"},{"name":"fibro-odontoma, ameloblastic","type":"related"},{"name":"fibro-odontomas","type":"related"},{"name":"fibro-odontomas, ameloblastic","type":"related"},{"name":"fibroodontoma","type":"exact"},{"name":"fibroodontomas","type":"related"},{"name":"odontoma","type":"exact"},{"name":"odontoma, benign","type":"exact"},{"name":"odontoma, compound","type":"related"},{"name":"odontomas","type":"related"},{"name":"odontomas, compound","type":"related"}],"termid":"MONDO:0043251","xrefs":{"Monarch":{"xref_id":"0043251"}}}


id: PBO:0089525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP complex ATPase subunit Brr2","termid":"PBO:0089525"}


id: GO:0048780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of erythrophore differentiation.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of erythrophore differentiation","termid":"GO:0048778"},{"relation_name":"is_a","term_name":"positive regulation of pigment cell differentiation","termid":"GO:0050942"},{"relation_name":"positively_regulates","term_name":"erythrophore differentiation","termid":"GO:0048773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of erythrophore differentiation","synonyms":[{"name":"activation of erythrophore differentiation","type":"narrow"},{"name":"stimulation of erythrophore differentiation","type":"narrow"},{"name":"up regulation of erythrophore differentiation","type":"exact"},{"name":"up-regulation of erythrophore differentiation","type":"exact"},{"name":"upregulation of erythrophore differentiation","type":"exact"}],"termid":"GO:0048780"}


id: PBO:0076825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENT5C divergent transcript","termid":"PBO:0076825"}


id: PBO:0028427
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_sodium_fluoride","termid":"PBO:0028427"}


id: MONDO:0006017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete western equine encephalitis (obsolete MONDO:0006017)","termid":"MONDO:0006017","xrefs":{"Monarch":{"xref_id":"0006017"}}}


id: PBO:0091405
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by D. melanogaster Cdc5","termid":"PBO:0091405"}


id: MONDO:0002669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma arising from the ampulla of Vater. Morphologically, it is characterized by the presence of mucin-containing signet-ring cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrahepatic bile duct signet ring cell carcinoma","termid":"MONDO:0002664"},{"relation_name":"is_a","term_name":"ampulla of vater adenocarcinoma","termid":"MONDO:0002670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515","MONDO:0004992"],"is_obsolete":false,"name":"ampullary signet ring cell adenocarcinoma","secondary_identifiers":["DOID:3501","UMLS:C1332249","NCIT:C6656","MEDGEN:231057"],"synonyms":[{"name":"ampulla of Vater signet Ring cell carcinoma","type":"exact"},{"name":"ampullary signet Ring cell carcinoma","type":"exact"},{"name":"ampullary signet ring cell carcinoma","type":"exact"}],"termid":"MONDO:0002669","xrefs":{"Monarch":{"xref_id":"0002669"}}}


id: GO:0001927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of various polypeptides into the exocyst complex.","definition_xrefs":["PMID:9700152","Wikipedia:Exocyst","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"vesicle docking involved in exocytosis","termid":"GO:0006904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0140056","GO:0044085","GO:0008150","GO:0065003","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"exocyst assembly","termid":"GO:0001927"}


id: GO:0006413
data:
  {"annotated_genes":["SJAG_01576","SJAG_03658","SJAG_01487","SJAG_04772","SJAG_01954","SJAG_02026","SJAG_02263","SJAG_03869","SJAG_02072","SJAG_00466","SJAG_04744","SJAG_03629","SJAG_00912","SJAG_01249","SJAG_03794","SJAG_02592","SJAG_03472","SJAG_00507","SJAG_05003","SJAG_01517","SJAG_00887","SJAG_02856","SJAG_02638","SJAG_01436","SJAG_00892","SJAG_01942","SJAG_03788","SJAG_04900","SJAG_02376","SJAG_02201","SJAG_00690","SJAG_04981","SJAG_04929","SJAG_01117","SJAG_02471","SJAG_00786","SJAG_04891","SJAG_03534","SJAG_04093","SJAG_02061","SJAG_02307","SJAG_03678","SJAG_03996","SJAG_04383","SJAG_00169","SJAG_04873","SJAG_02164","SJAG_03147","SJAG_01368","SJAG_00662","SJAG_02390","SJAG_04959","SJAG_01643","SJAG_01659","SJAG_04635","SJAG_02995","SJAG_03433","SJAG_03223","SJAG_03732","SJAG_00105","SJAG_02628"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72050],"is_not":false,"summary":null,"term":"GO:0006413"},{"annotations":[98707,110987,90684,114359,97557,103556,105968,118912,93101,107672,103738,90226,105109,100845,103871,96993,87844,107382,74282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002183"},{"annotations":[64171,69847,63984,97183,99262,75456,59908,59208,59642,68829,72283,62487],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001732"},{"annotations":[73878,78717,118461,71801,96418,78295],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001731"},{"annotations":[102252,107640,99035,105943,91325,74478,101640,78847,108710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070124"},{"annotations":[91636,112534],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904689"},{"annotations":[110042,94698,116005,70344,99667,75586],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1990625"},{"annotations":[100799],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0070134"},{"annotations":[73144],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045948"},{"annotations":[103671,95560,104303],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1990611"},{"annotations":[103440],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1990983"},{"annotations":[75457,73879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002188"}]},"cv_name":"biological_process","definition":"The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.","definition_xrefs":["ISBN:019879276X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":61,"genes_by_uniquename":{"SJAG_00105":null,"SJAG_00169":null,"SJAG_00466":null,"SJAG_00507":null,"SJAG_00662":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_00887":null,"SJAG_00892":null,"SJAG_00912":null,"SJAG_01117":null,"SJAG_01249":null,"SJAG_01368":null,"SJAG_01436":null,"SJAG_01487":null,"SJAG_01517":null,"SJAG_01576":null,"SJAG_01643":null,"SJAG_01659":null,"SJAG_01942":null,"SJAG_01954":null,"SJAG_02026":null,"SJAG_02061":null,"SJAG_02072":null,"SJAG_02164":null,"SJAG_02201":null,"SJAG_02263":null,"SJAG_02307":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02471":null,"SJAG_02592":null,"SJAG_02628":null,"SJAG_02638":null,"SJAG_02856":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03223":null,"SJAG_03433":null,"SJAG_03472":null,"SJAG_03534":null,"SJAG_03629":null,"SJAG_03658":null,"SJAG_03678":null,"SJAG_03732":null,"SJAG_03788":null,"SJAG_03794":null,"SJAG_03869":null,"SJAG_03996":null,"SJAG_04093":null,"SJAG_04383":null,"SJAG_04635":null,"SJAG_04744":null,"SJAG_04772":null,"SJAG_04873":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04929":null,"SJAG_04959":null,"SJAG_04981":null,"SJAG_05003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"translational initiation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006440","GO:0006454","Reactome:R-HSA-72613"],"synonyms":[{"name":"biopolymerisation","type":"broad"},{"name":"biopolymerization","type":"broad"},{"name":"protein synthesis initiation","type":"broad"},{"name":"translation initiation","type":"exact"}],"termid":"GO:0006413","terms_by_termid":{"GO:0001731":null,"GO:0001732":null,"GO:0002183":null,"GO:0002188":null,"GO:0006413":null,"GO:0045948":null,"GO:0070124":null,"GO:0070134":null,"GO:1904689":null,"GO:1990611":null,"GO:1990625":null,"GO:1990983":null}}


id: GO:0035250
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047220"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactose group from UDP-galactose to an acceptor molecule.","definition_xrefs":["PMID:19858195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"UDP-galactosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0035250","terms_by_termid":{"GO:0047220":null}}


id: PBO:0051130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2-26","termid":"PBO:0051130"}


id: PBO:0082176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector; involved in the secretory and endocytic pathways; contains C2C2H2 cysteine/histidine motif","termid":"PBO:0082176"}


id: MONDO:0007366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any benign neonatal seizures in which the cause of the disease is a mutation in the KCNQ3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neonatal seizures","termid":"MONDO:0016027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial neonatal, 2","secondary_identifiers":["GARD:15054","OMIM:121201","UMLS:C1852581","MEDGEN:377707"],"synonyms":[{"name":"BFNS2","type":"related"},{"name":"KCNQ3 benign neonatal seizures","type":"exact"},{"name":"benign neonatal seizures caused by mutation in KCNQ3","type":"exact"},{"name":"convulsions, benign familial neonatal, 2","type":"related"},{"name":"seizures, benign familial neonatal, 2","type":"exact"},{"name":"seizures, benign familial neonatal, type 2","type":"exact"},{"name":"seizures, benign neonatal, 2","type":"exact"}],"termid":"MONDO:0007366","xrefs":{"Monarch":{"xref_id":"0007366"}}}


id: PBO:0041069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain protein I3 pseudogene 2","termid":"PBO:0041069"}


id: MONDO:0000758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that is caused by infection with Bartonella, and which is characterized by vascular proliferation, usually in immunocompromised individuals.","definition_xrefs":["NCIT:C3477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bartonellosis","termid":"MONDO:0005664"},{"relation_name":"is_a","term_name":"benign neoplasm of skin","termid":"MONDO:0021440"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"},{"relation_name":"is_a","term_name":"angiomatosis","termid":"MONDO:0024461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"bacillary angiomatosis","secondary_identifiers":["SCTID:58213005","icd11.foundation:1416616903","MESH:D016917","UMLS:C0085434","DOID:0060345","ICD9:083.8","MEDGEN:88409"],"synonyms":[{"name":"Bartonella angiomatosis","type":"exact"},{"name":"Bartonella caused angiomatosis","type":"exact"},{"name":"angiomatoses, bacillary","type":"related"},{"name":"angiomatoses, bacillary epithelioid","type":"related"},{"name":"angiomatoses, epithelioid","type":"related"},{"name":"angiomatosis, bacillary epithelioid","type":"related"},{"name":"angiomatosis, epithelioid","type":"related"},{"name":"bacillary Angiomatoses","type":"related"},{"name":"bacillary angiomatosis","type":"exact"},{"name":"bacillary epithelioid Angiomatoses","type":"related"},{"name":"bacillary epithelioid angiomatosis","type":"exact"},{"name":"epithelioid Angiomatoses","type":"related"},{"name":"epithelioid Angiomatoses, bacillary","type":"related"},{"name":"epithelioid angiomatosis","type":"exact"},{"name":"epithelioid angiomatosis, bacillary","type":"related"}],"termid":"MONDO:0000758","xrefs":{"Monarch":{"xref_id":"0000758"}}}


id: PBO:0031706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_necrotic_cell_death_(obsolete_FYPO:0000504)","termid":"PBO:0031706"}


id: PBO:0080006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP12 pseudogene 1","termid":"PBO:0080006"}


id: PBO:0048680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLE1 RNA export mediator","termid":"PBO:0048680"}


id: GO:0035776
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the pronephric proximal tubule over time, from its formation to the mature structure. A pronephric nephron tubule is an epithelial tube that is part of the pronephros.","definition_xrefs":["PMID:18787069","GOC:mtg_kidney_jan10","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephric nephron tubule development","termid":"GO:0039020"},{"relation_name":"is_a","term_name":"proximal tubule development","termid":"GO:0072014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric proximal tubule development","termid":"GO:0035776"}


id: PBO:0058066
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4285","termid":"PBO:0058066"}


id: GO:1900000
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anthocyanin catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of anthocyanin metabolic process","termid":"GO:0031537"},{"relation_name":"regulates","term_name":"anthocyanin-containing compound catabolic process","termid":"GO:0046284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anthocyanin catabolic process","synonyms":[{"name":"regulation of anthocyanin breakdown","type":"exact"},{"name":"regulation of anthocyanin catabolism","type":"exact"},{"name":"regulation of anthocyanin degradation","type":"exact"}],"termid":"GO:1900000"}


id: FYECO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which anidulafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers at sub lethal dose for the assayed cell density.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ anidulafungin","termid":"FYECO:0000398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ anidulafungin SLD","termid":"FYECO:0000399"}


id: PBO:0003008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER unfolded protein response protein (predicted)","termid":"PBO:0003008"}


id: PBO:0085485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Processing alpha glucosidase I; ER type II integral membrane N-glycoprotein involved in assembly of cell wall beta 1,6 glucan and asparagine-linked protein glycosylation; also involved in ER protein quality control and sensing of ER stress","termid":"PBO:0085485"}


id: MONDO:0014004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral striopallidodentate calcinosis","termid":"MONDO:0008947"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"basal ganglia calcification, idiopathic, 4","secondary_identifiers":["GARD:15893","MEDGEN:767235","UMLS:C3554321","OMIM:615007"],"synonyms":[{"name":"IBGC4","type":"related"},{"name":"basal ganglia calcification, idiopathic, 4","type":"exact"},{"name":"basal ganglia calcification, idiopathic, type 4","type":"exact"}],"termid":"MONDO:0014004","xrefs":{"Monarch":{"xref_id":"0014004"}}}


id: MONDO:0011391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Megalencephalic leukoencephalopathy with subcortical cysts (MLC) is a form of leukodystrophy that is characterized by infantile-onset macrocephaly, often with mild neurologic signs at presentation (such as mild motor delay), which worsen with time, leading to poor ambulation, falls, ataxia, spasticity, increasing seizures and cognitive decline. Brain magnetic resonance imaging reveals diffusely abnormal and mildly swollen white matter as well as subcortical cysts in the anterior temporal and frontoparietal regions.","definition_xrefs":["Orphanet:2478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukoencephalopathy, megalencephalic","termid":"MONDO:0000137"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"megalencephalic leukoencephalopathy with subcortical cysts","secondary_identifiers":["NANDO:2200837","SCTID:703536004","DOID:0080315","NANDO:1200950","UMLS:C1858854","MEDGEN:347006","GARD:3445","MESH:C536141"],"synonyms":[{"name":"MLC","type":"exact"},{"name":"MLC1","type":"related"},{"name":"Vacuolating megalencephalic leukoencephalopathy with subcortical cysts","type":"exact"},{"name":"Van der Knaap syndrome","type":"exact"},{"name":"megalencephalic leukodystrophy","type":"exact"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts 1","type":"related"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts type 1","type":"exact"},{"name":"megalencephaly-cystic leukodystrophy","type":"related"},{"name":"megalencephaly-cystic leukodystrophy syndrome","type":"exact"}],"termid":"MONDO:0011391","xrefs":{"Monarch":{"xref_id":"0011391"}}}


id: PBO:0017637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin family protein Mpd1 (predicted)","termid":"PBO:0017637"}


id: PBO:0071218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 59","termid":"PBO:0071218"}


id: FYPO:0002040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of deadenylation-independent decapping of nuclear-transcribed mRNA is increased. All RNA decapping may be increased, or one or more specific RNA molecules may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"FYPO:0002038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased deadenylation-independent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"increased deadenylation-independent decapping of nuclear-transcribed mRNA during mitotic cell cycle","type":"related"},{"name":"increased deadenylation-independent decapping of nuclear-transcribed mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0002040"}


id: PR:O94332
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrn11 gene.","definition_xrefs":["UniProtKB:O94332","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I-specific transcription initiation factor rrn11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.17c","synonyms":[{"name":"Spom972h-rrn11","type":"exact"}],"termid":"PR:O94332"}


id: PBO:0040462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase 13A4","termid":"PBO:0040462"}


id: GO:0006753
data:
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id: PR:Q10344
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translationally-controlled tumor protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01574","PANTHER:PTHR11991:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally-controlled tumor protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.02c","secondary_identifiers":["UniProtKB:Q10344"],"synonyms":[{"name":"Spom972h-TPT1","type":"exact"},{"name":"TCTP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p23fyp (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10344"}


id: MONDO:0013675
data:
  {"annotated_genes":["SJAG_01147"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86005],"is_not":false,"summary":null,"term":"MONDO:0013675"}]},"cv_name":"mondo","definition":"Any fatal multiple mitochondrial dysfunctions syndrome in which the cause of the disease is a mutation in the BOLA3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01147":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0002525"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3280378","DOID:0080134","GARD:17662","MEDGEN:482008","OMIM:614299","Orphanet:401874"],"synonyms":[{"name":"BOLA3 deficiency","type":"exact"},{"name":"BOLA3 fatal multiple mitochondrial dysfunctions syndrome","type":"exact"},{"name":"MMDS2","type":"related"},{"name":"fatal multiple mitochondrial dysfunctions syndrome caused by mutation in BOLA3","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome 2","type":"exact"},{"name":"multiple mitochondrial dysfunctions syndrome 2 with hyperglycinemia","type":"related"},{"name":"multiple mitochondrial dysfunctions syndrome type 2","type":"exact"}],"termid":"MONDO:0013675","terms_by_termid":{"MONDO:0013675":null},"xrefs":{"Monarch":{"xref_id":"0013675"}}}


id: GO:0062198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A region of heterochromatin associated with sites in rDNA repeats where replication forks pause.","definition_xrefs":["PMID:25417108"],"gene_count":0,"genotype_count":0,"name":"obsolete rDNA replication pause site heterochromatin (obsolete GO:0062198)","termid":"GO:0062198"}


id: PBO:0086451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative membrane glycoprotein; has strong similarity to Vth1p and Pep1p/Vps10p; may be involved in vacuolar protein sorting","termid":"PBO:0086451"}


id: PBO:0059131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase phosphoprotein 8","termid":"PBO:0059131"}


id: PBO:0056153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage immunometabolism regulator","termid":"PBO:0056153"}


id: FYPO:0004863
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form microtubules that are longer than normal and are curved, i.e. follow a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"has_part","term_name":"curved microtubules","termid":"FYPO:0004862"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0002399"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0002399","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"long curved microtubules","synonyms":[{"name":"elongated curved microtubules","type":"exact"},{"name":"long curved microtubules during mitotic cell cycle","type":"related"},{"name":"long curved microtubules during vegetative growth","type":"exact"},{"name":"microtubule organization defects, long curved microtubules","type":"exact"}],"termid":"FYPO:0004863"}


id: PBO:0066035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN pseudogene 4","termid":"PBO:0066035"}


id: PBO:0077634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and ubiquitin like domain containing 2","termid":"PBO:0077634"}


id: PBO:0055315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2743","termid":"PBO:0055315"}


id: FYPO:0004845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which lagging strand elongation during nuclear DNA replication is abnormal at telomeric regions.","definition_xrefs":["PMID:26041456","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication lagging strand elongation","termid":"FYPO:0004844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"abnormal mitotic DNA replication lagging strand elongation at telomere","synonyms":[{"name":"abnormal DNA replication lagging strand elongation at telomere during mitotic cell cycle","type":"exact"},{"name":"abnormal DNA replication lagging strand elongation at telomere during vegetative growth","type":"exact"},{"name":"abnormal mitotic DNA replication lagging strand synthesis at telomere","type":"exact"}],"termid":"FYPO:0004845"}


id: FYPO:0001697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a topoisomerase inhibitor. Cells stop growing (and may die) at a concentration of a topoisomerase inhibitor that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to topoisomerase inhibitor","synonyms":[{"name":"hypersensitive to topoisomerase inhibitor","type":"exact"},{"name":"sensitive to topoisomerase inhibitor during mitotic cell cycle","type":"related"},{"name":"sensitive to topoisomerase inhibitor during vegetative growth","type":"exact"}],"termid":"FYPO:0001697"}


id: PBO:0063739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 4","termid":"PBO:0063739"}


id: PR:O59836
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dfp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hsk1-interacting molecule 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.13","synonyms":[{"name":"DNA repair protein rad35 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dfp1","type":"exact"}],"termid":"PR:O59836"}


id: MONDO:0020487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pontiac fever (PF) is a mild form of legionellosis manifesting with flu-like symptoms such as nausea, myalgia, fever, cough and headache but without pneumonia.","definition_xrefs":["Orphanet:99748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"legionellosis","termid":"MONDO:0005823"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pontiac fever","secondary_identifiers":["ICD9:041.89","GARD:13588","DOID:0050150","MEDGEN:575661","icd11.foundation:1670562980","NCIT:C128335","SCTID:240447002","MedDRA:10054161","UMLS:C0343528"],"termid":"MONDO:0020487","xrefs":{"Monarch":{"xref_id":"0020487"}}}


id: PBO:0075703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum response factor","termid":"PBO:0075703"}


id: MONDO:0022953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete delta-1-pyrroline-5-carboxylate dehydrogenase deficiency (obsolete MONDO:0022953)","termid":"MONDO:0022953","xrefs":{"Monarch":{"xref_id":"0022953"}}}


id: MONDO:1012907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy due to abnormal glycosylation of α-dystroglycan that occurs in dogs due to a mutation in the LARGE1 gene.","definition_xrefs":["PMID:34654610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, dog","termid":"MONDO:1010911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy, LARGE1-related, dog","secondary_identifiers":["OMIA:002460-9615"],"termid":"MONDO:1012907","xrefs":{"Monarch":{"xref_id":"1012907"}}}


id: PBO:0002506
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.4.11","termid":"PBO:0002506"}


id: GO:0014832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary bladder. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary bladder is a musculomembranous sac along the urinary tract.","definition_xrefs":["GOC:mr","GOC:mtg_muscle","PMID:11768524","PMID:18276178","PMID:538956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary tract smooth muscle contraction","termid":"GO:0014848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urinary bladder smooth muscle contraction","termid":"GO:0014832"}


id: PBO:0066813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 112","termid":"PBO:0066813"}


id: PBO:0029235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_lysis_during_cellular_response_to_salt_stress","termid":"PBO:0029235"}


id: GO:0090495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a low-density lipoprotein particle into its constituent components.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle disassembly","termid":"GO:0071829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle disassembly","termid":"GO:0090495"}


id: GO:0160256
data:
  {"annotated_genes":["SJAG_00543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108269],"is_not":false,"summary":null,"term":"GO:0160256"}]},"cv_name":"biological_process","definition":"The process in which L-lysine is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["PMID:24652292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"},{"relation_name":"is_a","term_name":"L-lysine transmembrane transport","termid":"GO:1903401"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"L-lysine transmembrane import into the mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0160256","terms_by_termid":{"GO:0160256":null}}


id: MONDO:1012291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal hepatitis, non-human animal","termid":"MONDO:1011779"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal hepatitis, dog","secondary_identifiers":["OMIA:001094-9615"],"termid":"MONDO:1012291","xrefs":{"Monarch":{"xref_id":"1012291"}}}


id: PBO:0013762
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae FUR4","termid":"PBO:0013762"}


id: MONDO:0016453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Foodborne botulism is the most common form of botulism, a rare acquired neuromuscular junction disease with descending flaccid paralysis due to botulinum neurotoxins (BoNTs). It is caused by consumption of contaminated food containing BoNTs.","definition_xrefs":["Orphanet:228371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"botulism","termid":"MONDO:0005498"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foodborne botulism","secondary_identifiers":["icd11.foundation:2033726602","SCTID:398523009","NCIT:C128341","ICD9:005.1","DOID:0050352","UMLS:C1739094","MEDGEN:320728","GARD:20591"],"synonyms":[{"name":"intoxication botulism","type":"exact"}],"termid":"MONDO:0016453","xrefs":{"Monarch":{"xref_id":"0016453"}}}


id: MONDO:0006073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, slow growing neoplasm arising from tooth-forming tissues. The vast majority of cases are intraosseous and most often grow in the maxilla. It is characterized by the presence of odontogenic epithelium which is embedded in a connective tissue stroma. Local excision is curative and recurrences are very rare.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"oral cavity cancer","termid":"MONDO:0005515"},{"relation_name":"is_a","term_name":"benign neoplasm of oral cavity","termid":"MONDO:0021445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenomatoid odontogenic tumor","secondary_identifiers":["ICDO:9300/0","MESH:C538229","EFO:1000072","MEDGEN:137782","NCIT:C4310","UMLS:C0334565"],"synonyms":[{"name":"adenomatoid odontogenic neoplasm","type":"exact"}],"termid":"MONDO:0006073","xrefs":{"Monarch":{"xref_id":"0006073"}}}


id: PBO:0060475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NANOG neighbor homeobox","termid":"PBO:0060475"}


id: MONDO:0005910
data:
  {"annotated_genes":["SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010600"}]},"cv_name":"mondo","definition":"Disorders in which phagocytic cells cannot kill ingested bacteria; characterized by frequent recurring infection with formulation of granulomas.","definition_xrefs":["MESH:D010585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"phagocytic cell dysfunction","termid":"MONDO:0024627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"phagocyte bactericidal dysfunction","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0007433","DOID:3262","MEDGEN:14713","UMLS:C0031306"],"synonyms":[{"name":"phagocytic dysfunction","type":"exact"}],"termid":"MONDO:0005910","terms_by_termid":{"MONDO:0010600":null},"xrefs":{"Monarch":{"xref_id":"0005910"}}}


id: PBO:0080114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV radiation resistance associated","termid":"PBO:0080114"}


id: PBO:0066129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 8","termid":"PBO:0066129"}


id: GO:0061941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of c-di-GMP signaling.","definition_xrefs":["PMID:22864416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"regulation of c-di-GMP signaling","termid":"GO:0061940"},{"relation_name":"positively_regulates","term_name":"c-di-GMP signaling","termid":"GO:0061939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of c-di-GMP signaling","termid":"GO:0061941"}


id: PR:Q10143
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12409:SF0","OMA:SCHPO00236","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.07c","secondary_identifiers":["UniProtKB:Q10143"],"synonyms":[{"name":"Spom972h-VBP1","type":"exact"}],"termid":"PR:Q10143"}


id: MONDO:0016147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of dystrophin","secondary_identifiers":["NANDO:1200487","Orphanet:207085","GARD:2031","MEDGEN:1826053","UMLS:C5679787"],"synonyms":[{"name":"dystrophinopathy","type":"exact"}],"termid":"MONDO:0016147","xrefs":{"Monarch":{"xref_id":"0016147"}}}


id: GO:0099586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium ions sequestered in the endoplasmic reticulum, Golgi apparatus or mitochondria are released into the postsynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"release of sequestered calcium ion into postsynaptic cytosol","termid":"GO:0099586"}


id: GO:1905620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of alpha-(1->3)-fucosyltransferase activity.","definition_xrefs":["PMID:15364955","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of alpha-(1->3)-fucosyltransferase activity (obsolete GO:1905620)","synonyms":[{"name":"down regulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"down regulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"down regulation of alpha-(1->3)-fucosyltransferase activity","type":"exact"},{"name":"down regulation of alpha-1,3-fucosyltransferase activity","type":"exact"},{"name":"down-regulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"down-regulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"down-regulation of alpha-(1->3)-fucosyltransferase activity","type":"exact"},{"name":"down-regulation of alpha-1,3-fucosyltransferase activity","type":"exact"},{"name":"downregulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"downregulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"downregulation of alpha-(1->3)-fucosyltransferase activity","type":"exact"},{"name":"downregulation of alpha-1,3-fucosyltransferase activity","type":"exact"},{"name":"inhibition of alpha(1,3)-fucosyltransferase activity","type":"narrow"},{"name":"inhibition of alpha-(1,3)-fucosyltransferase activity","type":"narrow"},{"name":"inhibition of alpha-(1->3)-fucosyltransferase activity","type":"narrow"},{"name":"inhibition of alpha-1,3-fucosyltransferase activity","type":"narrow"},{"name":"negative regulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"negative regulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"negative regulation of alpha-1,3-fucosyltransferase activity","type":"exact"}],"termid":"GO:1905620"}


id: PBO:0049111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 173","termid":"PBO:0049111"}


id: GO:0033547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 1D myo-inositol 1,2,3,4,5,6-hexakisphosphate, phytate, by a pathway using inositol 1,4,5-trisphosphate produced from phosphatidylinositol 4,5-biphosphate hydrolysis by phospholipase C; in this pathway, inositol 1,4,5-trisphosphate is successively phosphorylated to yield inositol hexakisphosphate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-4541"],"gene_count":0,"genotype_count":0,"name":"obsolete myo-inositol hexakisphosphate biosynthetic process, via direct phosphorylation of inositol 1,4,5-trisphosphate (obsolete GO:0033547)","synonyms":[{"name":"myo-inositol hexakisphosphate anabolism, via direct phosphorylation of inositol 1,4,5-trisphosphate","type":"exact"},{"name":"myo-inositol hexakisphosphate biosynthesis, via direct phosphorylation of inositol 1,4,5-trisphosphate","type":"exact"},{"name":"myo-inositol hexakisphosphate biosynthetic process, via direct phosphorylation of inositol 1,4,5-trisphosphate","type":"exact"},{"name":"myo-inositol hexakisphosphate formation, via direct phosphorylation of inositol 1,4,5-trisphosphate","type":"exact"},{"name":"myo-inositol hexakisphosphate synthesis, via direct phosphorylation of inositol 1,4,5-trisphosphate","type":"exact"},{"name":"phytate biosynthesis, via direct phosphorylation of inositol 1,4,5-trisphosphate","type":"exact"},{"name":"phytate biosynthetic process, via direct phosphorylation of inositol 1,4,5-trisphosphate","type":"exact"}],"termid":"GO:0033547"}


id: PBO:0040058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 4","termid":"PBO:0040058"}


id: PBO:0030099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_ornithine_level","termid":"PBO:0030099"}


id: PBO:0073108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 9C member 7","termid":"PBO:0073108"}


id: GO:0043400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of cortisol, a steroid hormone that in humans is the major circulating hormone of the cortex, or outer layer, of the adrenal gland.","definition_xrefs":["PMID:11027914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"glucocorticoid secretion","termid":"GO:0035933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"cortisol secretion","synonyms":[{"name":"hydrocortisone secretion","type":"exact"}],"termid":"GO:0043400"}


id: GO:0036140
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-asparagine + 2-oxoglutarate + O2 = peptidyl 3-hydroxy-L-asparagine + succinate + CO2.","definition_xrefs":["RHEA:54260","PMID:12215170","GOC:reh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"[protein]-asparagine 3-dioxygenase activity","secondary_identifiers":["GO:0102113"],"synonyms":[{"name":"hypoxia-inducible factor-asparagine oxygenase activity","type":"narrow"},{"name":"peptidyl-asparagine 3-dioxygenase activity","type":"exact"}],"termid":"GO:0036140"}


id: GO:0004520
data:
  {"annotated_genes":["SJAG_03724","SJAG_02828","SJAG_00623","SJAG_03665","SJAG_01173","SJAG_03994","SJAG_01262","SJAG_01948","SJAG_02556","SJAG_02031","SJAG_03675","SJAG_05373","SJAG_04752","SJAG_01832","SJAG_05237","SJAG_01648","SJAG_02708","SJAG_01044","SJAG_04183","SJAG_02298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990599"},{"annotations":[74780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[104503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990601"},{"annotations":[73179,74908,78687,71692,66732,75955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"},{"annotations":[65884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140078"},{"annotations":[95072,101513,79515,59718,74775,78890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008821"},{"annotations":[106305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033892"},{"annotations":[73595,80252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003906"},{"annotations":[101515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106332"},{"annotations":[79743,72259,110408,111200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000014"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of ester linkages within deoxyribonucleic acid by creating internal breaks.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease activity","termid":"GO:0004519"},{"relation_name":"is_a","term_name":"DNA nuclease activity","termid":"GO:0004536"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_01044":null,"SJAG_01173":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_01948":null,"SJAG_02031":null,"SJAG_02298":null,"SJAG_02556":null,"SJAG_02708":null,"SJAG_02828":null,"SJAG_03665":null,"SJAG_03675":null,"SJAG_03724":null,"SJAG_03994":null,"SJAG_04183":null,"SJAG_04752":null,"SJAG_05237":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"DNA endonuclease activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6782204","Reactome:R-HSA-9023941","Reactome:R-HSA-5686657","Reactome:R-HSA-5690988","Reactome:R-HSA-5693584","Reactome:R-HSA-6782224","Reactome:R-HSA-5687464","Reactome:R-HSA-5693608","Reactome:R-HSA-110359","Reactome:R-HSA-5686440"],"synonyms":[{"name":"DNA nicking activity","type":"related"},{"name":"endodeoxyribonuclease activity","type":"exact"},{"name":"endonuclease G activity","type":"related"}],"termid":"GO:0004520","terms_by_termid":{"GO:0000014":null,"GO:0003906":null,"GO:0008821":null,"GO:0017108":null,"GO:0033892":null,"GO:0048257":null,"GO:0106332":null,"GO:0140078":null,"GO:1990599":null,"GO:1990601":null}}


id: PBO:0091769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type region small non-coding RNA (predicted)","termid":"PBO:0091769"}


id: PBO:0063109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARL pseudogene 2","termid":"PBO:0063109"}


id: GO:1904113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of muscle filament sliding.","definition_xrefs":["PMID:25717181","GO_REF:0000058","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle filament sliding","termid":"GO:0032971"},{"relation_name":"is_a","term_name":"negative regulation of muscle contraction","termid":"GO:0045932"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"muscle filament sliding","termid":"GO:0030049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle filament sliding","synonyms":[{"name":"down regulation of muscle filament sliding","type":"exact"},{"name":"down-regulation of muscle filament sliding","type":"exact"},{"name":"downregulation of muscle filament sliding","type":"exact"},{"name":"inhibition of muscle filament sliding","type":"narrow"}],"termid":"GO:1904113"}


id: MONDO:1010213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic monocytic leukemia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia, non-human animal","termid":"MONDO:0700100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic monocytic leukemia, non-human animal","secondary_identifiers":["OMIA:001573"],"termid":"MONDO:1010213","xrefs":{"Monarch":{"xref_id":"1010213"}}}


id: GO:0021920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of neuronal precursors to association neurons in the dorsal spinal cord.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","PMID:12593981","GOC:dgh","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in spinal cord association neuron specification (obsolete GO:0021920)","termid":"GO:0021920"}


id: MONDO:0012775
data:
  {"annotated_genes":["SJAG_02744"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86637],"is_not":false,"summary":null,"term":"MONDO:0012775"}]},"cv_name":"mondo","definition":"Any thrombocytopenia in which the cause of the disease is a mutation in the CYCS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02744":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:394329","UMLS:C2677608","OMIM:612004","MESH:C567438","GARD:18289"],"synonyms":[{"name":"CYCS thrombocytopenia","type":"exact"},{"name":"THC4","type":"related"},{"name":"thrombocytopenia 4","type":"exact"},{"name":"thrombocytopenia caused by mutation in CYCS","type":"exact"},{"name":"thrombocytopenia type 4","type":"exact"},{"name":"thrombocytopenia, autosomal dominant, 4","type":"related"}],"termid":"MONDO:0012775","terms_by_termid":{"MONDO:0012775":null},"xrefs":{"Monarch":{"xref_id":"0012775"}}}


id: MONDO:0017681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete erythrokeratoderma variabilis progressiva (obsolete MONDO:0017681)","termid":"MONDO:0017681","xrefs":{"Monarch":{"xref_id":"0017681"}}}


id: GO:0006329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete satellite DNA binding (obsolete GO:0006329)","synonyms":[{"name":"satellite DNA binding","type":"exact"}],"termid":"GO:0006329"}


id: MONDO:1012522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"turning calves syndrome, cattle","secondary_identifiers":["OMIA:002150-9913"],"synonyms":[{"name":"syndrome des veaux tourneurs","type":"exact"}],"termid":"MONDO:1012522","xrefs":{"Monarch":{"xref_id":"1012522"}}}


id: MONDO:0100350
data:
  {"annotated_genes":["SJAG_01537","SJAG_05289","SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015353"},{"annotations":[86501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013884"},{"annotations":[86031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030860"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal dominant","termid":"MONDO:0015362"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01352":null,"SJAG_01537":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, type 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C563443","GARD:16955","DOID:0111203","MEDGEN:318838","Orphanet:139536","UMLS:C1833308"],"synonyms":[{"name":"dHMN5","type":"broad"},{"name":"distal HMN V","type":"exact"},{"name":"distal hereditary motor neuropathy type V","type":"exact"},{"name":"distal spinal muscular atrophy type 5","type":"exact"}],"termid":"MONDO:0100350","terms_by_termid":{"MONDO:0013884":null,"MONDO:0015353":null,"MONDO:0030860":null},"xrefs":{"Monarch":{"xref_id":"0100350"}}}


id: PBO:0068425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein with serine rich domain 1 pseudogene 1","termid":"PBO:0068425"}


id: GO:1902225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of acrosome reaction.","definition_xrefs":["GOC:TermGenie","PMID:23430248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acrosome reaction","termid":"GO:0060046"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acrosome reaction","synonyms":[{"name":"down regulation of acrosome reaction","type":"exact"},{"name":"down-regulation of acrosome reaction","type":"exact"},{"name":"downregulation of acrosome reaction","type":"exact"},{"name":"inhibition of acrosome reaction","type":"narrow"}],"termid":"GO:1902225"}


id: MONDO:0013550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal myopathy with posterior leg and anterior hand involvement, also named distal ABD-filaminopathy, is a neuromuscular disease characterized by a progressive symmetric muscle weakness of anterior upper and posterior lower limbs.","definition_xrefs":["Orphanet:63273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"distal myopathy with posterior leg and anterior hand involvement","secondary_identifiers":["UMLS:C3279722","OMIM:614065","DOID:0111190","GARD:16666","MEDGEN:481352","SCTID:733489002"],"synonyms":[{"name":"MPD4","type":"related"},{"name":"Williams distal myopathy","type":"related"},{"name":"distal ABD-filaminopathy","type":"exact"},{"name":"myopathy, distal, 4","type":"related"},{"name":"myopathy, distal, type 4","type":"exact"}],"termid":"MONDO:0013550","xrefs":{"Monarch":{"xref_id":"0013550"}}}


id: PATO:0001072
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001072 absolute energy (obsolete PATO:0001072)","termid":"PATO:0001072"}


id: GO:0072485
data:
  {"annotated_genes":["SJAG_03048","SJAG_01805","SJAG_04140","SJAG_00082","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117068,94135,111578,102722,90324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of spindle assembly checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to spindle checkpoint signaling","termid":"GO:0072417"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to signal involved in spindle assembly checkpoint","type":"exact"},{"name":"spindle assembly checkpoint effector process","type":"exact"}],"termid":"GO:0072485","terms_by_termid":{"GO:0140429":null}}


id: SO:0001351
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methyl_2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methyl_2_thiouridine","secondary_identifiers":["RNAMOD:059"],"synonyms":[{"name":"5-methyl-2-thiouridine","type":"exact"},{"name":"five methyl 2 thiouridine","type":"exact"},{"name":"m5s2U","type":"exact"}],"termid":"SO:0001351"}


id: PBO:0088284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase Pgm2","termid":"PBO:0088284"}


id: MONDO:0010416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, cataract, retinitis pigmentosa, and sperm abnormalities","secondary_identifiers":["MEDGEN:395517","MESH:C567467","OMIM:300719","UMLS:C2678011"],"synonyms":[{"name":"deafness, cataract, retinitis pigmentosa, and sperm abnormalities","type":"exact"},{"name":"deafness, cataract, retinitis pigmentosa, and sperm abnormalities, X-linked recessive","type":"exact"}],"termid":"MONDO:0010416","xrefs":{"Monarch":{"xref_id":"0010416"}}}


id: PBO:0063606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet factor 4","termid":"PBO:0063606"}


id: PR:O42911
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm25 gene.","definition_xrefs":["UniProtKB:O42911","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S25, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.04","synonyms":[{"name":"Spom972h-rsm25","type":"exact"}],"termid":"PR:O42911"}


id: MONDO:0030298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary angioedema","termid":"MONDO:0019623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angioedema, hereditary, 8","secondary_identifiers":["UMLS:C5543528","MEDGEN:1780930","OMIM:619367"],"synonyms":[{"name":"HAE8","type":"exact"},{"name":"angioedema, hereditary, 8","type":"exact"}],"termid":"MONDO:0030298","xrefs":{"Monarch":{"xref_id":"0030298"}}}


id: PBO:0035899
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_secretion_during_vegetative_growth","termid":"PBO:0035899"}


id: MONDO:0001976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare movement disorder developed during pregnancy, characterized by involuntary jerky motion (chorea) and inability to maintain stable position of body parts (athetosis). rheumatic fever and collagen vascular disorders are frequently associated with this disease. Chorea may vary from mild to severe and occurs in approximately 1 per 2,000 to 3,000 pregnancies. (From Md Med J 1997 Sep;46(8):436-9)","definition_xrefs":["MESH:D020150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choreatic disease","termid":"MONDO:0001595"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorea gravidarum","secondary_identifiers":["SCTID:25113000","DOID:14483","icd11.foundation:113562578","ICD9:646.80","UMLS:C0264746","MEDGEN:75545"],"termid":"MONDO:0001976","xrefs":{"Monarch":{"xref_id":"0001976"}}}


id: GO:1900859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of brevianamide F biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of brevianamide F biosynthetic process (obsolete GO:1900859)","synonyms":[{"name":"down regulation of brevianamide F biosynthetic process","type":"exact"},{"name":"down-regulation of brevianamide F biosynthetic process","type":"exact"},{"name":"downregulation of brevianamide F biosynthetic process","type":"exact"}],"termid":"GO:1900859"}


id: GO:1900550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N',N'',N'''-triacetylfusarinine C.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"N',N'',N'''-triacetylfusarinine C metabolic process","termid":"GO:1900549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"N',N'',N'''-triacetylfusarinine C catabolic process","synonyms":[{"name":"N',N'',N'''-triacetylfusarinine C breakdown","type":"exact"},{"name":"N',N'',N'''-triacetylfusarinine C catabolism","type":"exact"},{"name":"N',N'',N'''-triacetylfusarinine C degradation","type":"exact"}],"termid":"GO:1900550"}


id: MONDO:0043106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited ichthyosis","termid":"MONDO:0015947"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis linearis circumflexa","secondary_identifiers":["SCTID:54336006","UMLS:C0265962","GARD:2967","MEDGEN:78578"],"synonyms":[{"name":"ichthyosis linearis circumflexa","type":"exact"}],"termid":"MONDO:0043106","xrefs":{"Monarch":{"xref_id":"0043106"}}}


id: GO:1903854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of stress response to copper ion.","definition_xrefs":["GOC:kmv","PMID:23437011","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of stress response to copper ion","termid":"GO:1903853"},{"relation_name":"negatively_regulates","term_name":"stress response to copper ion","termid":"GO:1990169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stress response to copper ion","synonyms":[{"name":"down regulation of response to copper ion stress","type":"exact"},{"name":"down regulation of response to copper toxicity","type":"related"},{"name":"down regulation of stress response to copper ion","type":"exact"},{"name":"down-regulation of response to copper ion stress","type":"exact"},{"name":"down-regulation of response to copper toxicity","type":"related"},{"name":"down-regulation of stress response to copper ion","type":"exact"},{"name":"downregulation of response to copper ion stress","type":"exact"},{"name":"downregulation of response to copper toxicity","type":"related"},{"name":"downregulation of stress response to copper ion","type":"exact"},{"name":"inhibition of response to copper ion stress","type":"narrow"},{"name":"inhibition of response to copper toxicity","type":"related"},{"name":"inhibition of stress response to copper ion","type":"narrow"},{"name":"negative regulation of response to copper ion stress","type":"exact"},{"name":"negative regulation of response to copper toxicity","type":"related"}],"termid":"GO:1903854"}


id: PBO:0018150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated sorting nexin Atg20 (predicted)","termid":"PBO:0018150"}


id: MONDO:0009547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Macrosomia-microphthalmia-cleft palate syndrome is a rare, genetic, multiple congenital anomalies/dysmorphic syndrome characterized by early macrosomia, bilateral severe microphthalmia and a protuberant abdomen with hepatomegaly. Additional reported features include brachycephaly, large fontanelles, prominent forehead, upturned nose and median cleft palate. Cyanotic apneic spells and overwhelming infection lead to death within the first 6 months of life. There have been no further descriptions in the literature since 1989.","definition_xrefs":["Orphanet:2432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrosomia-microphthalmia-cleft palate syndrome","secondary_identifiers":["GARD:177","MEDGEN:340874","UMLS:C1855467","MESH:C537830","OMIM:248110"],"synonyms":[{"name":"Teebi Al-Saleh Hassoon syndrome","type":"related"},{"name":"Teebi-Al Saleh-Hassoon syndrome","type":"exact"},{"name":"macrosomia microphthalmia cleft palate","type":"related"},{"name":"macrosomia with lethal microphthalmia","type":"related"},{"name":"macrosomia with microphthalmia, lethal","type":"related"}],"termid":"MONDO:0009547","xrefs":{"Monarch":{"xref_id":"0009547"}}}


id: GO:0051841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates or increases the frequency, rate or extent of cytolysis by that organism of cells in its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of cytolysis of symbiont cells (obsolete GO:0051841)","synonyms":[{"name":"activation by host of cytolysis of symbiont cells","type":"narrow"},{"name":"stimulation by host of cytolysis of symbiont cells","type":"narrow"},{"name":"up regulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"up-regulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"upregulation by host of cytolysis of symbiont cells","type":"exact"}],"termid":"GO:0051841"}


id: PBO:0062229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 2","termid":"PBO:0062229"}


id: MONDO:0013900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any alternating hemiplegia of childhood in which the cause of the disease is a mutation in the ATP1A3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alternating hemiplegia of childhood","termid":"MONDO:0016241"},{"relation_name":"is_a","term_name":"ATP1A3-associated neurological disorder","termid":"MONDO:0700002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"alternating hemiplegia of childhood 2","secondary_identifiers":["MEDGEN:766702","OMIM:614820","UMLS:C3553788","GARD:15845"],"synonyms":[{"name":"AHC2","type":"related"},{"name":"ATP1A3 alternating hemiplegia of childhood","type":"exact"},{"name":"alternating hemiplegia of childhood 2","type":"exact"},{"name":"alternating hemiplegia of childhood caused by mutation in ATP1A3","type":"exact"},{"name":"alternating hemiplegia of childhood type 2","type":"exact"}],"termid":"MONDO:0013900","xrefs":{"Monarch":{"xref_id":"0013900"}}}


id: GO:0051993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: abscisic acid glucose ester + H2O = abscisic acid + beta-D-glucose.","definition_xrefs":["PMID:16990135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"abscisic acid glucose ester beta-glucosidase activity","secondary_identifiers":["EC:3.2.1.175","MetaCyc:RXN-11469","RHEA:31347"],"synonyms":[{"name":"ABA-GE beta-glucosidase activity","type":"exact"}],"termid":"GO:0051993"}


id: PBO:0113758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin-like histone chaperone/CENP-A amino terminus domain (NTD) isomerase Ani1/Fkbp39","termid":"PBO:0113758"}


id: PBO:0088413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular leucine-rich repeat domain, receptor L domain-like Ecm33","termid":"PBO:0088413"}


id: MONDO:0000801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a green mud crab.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete green mud crab allergy (obsolete MONDO:0000801)","secondary_identifiers":["DOID:0060526"],"synonyms":[{"name":"Scylla paramamosain allergy","type":"exact"},{"name":"allergy of green mud crab","type":"exact"},{"name":"crab allergy","type":"related"},{"name":"green mud crab allergic disease","type":"exact"}],"termid":"MONDO:0000801","xrefs":{"Monarch":{"xref_id":"0000801"}}}


id: PBO:0082355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atypical protein kinase; along with its paralog, ALK1, required for proper spindle positioning and nuclear segregation following mitotic arrest, proper organization of cell polarity factors in mitosis, proper localization of formins and polarity factors, and survival in cells that activate spindle assembly checkpoint; negatively regulates the morphogenesis checkpoint in response to polarity insults in opposition to ALK1; phosphorylated in response to DNA damage; similar to mammalian haspins","termid":"PBO:0082355"}


id: PBO:0108570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Las1","termid":"PBO:0108570"}


id: MONDO:0011825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"streptococcus, group A, severity of infection by","secondary_identifiers":["MEDGEN:375858","OMIM:607395","UMLS:C1846298"],"synonyms":[{"name":"streptococcus, group A, severity of infection by","type":"exact"}],"termid":"MONDO:0011825","xrefs":{"Monarch":{"xref_id":"0011825"}}}


id: GO:0030132
data:
  {"annotated_genes":["SJAG_01167","SJAG_00104","SJAG_00800","SJAG_02805"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[108699,58348,74706,78441],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"The coat found on coated pits and the coated vesicles derived from coated pits; comprises clathrin and the AP-2 adaptor complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coat","termid":"GO:0030118"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"clathrin-coated pit","termid":"GO:0005905"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"clathrin coat of coated pit","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030132","terms_by_termid":{"GO:0030122":null}}


id: MOD:00373
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links L-tyrosine residues with an ether bond to form 3'-(O4'-L-tyrosinyl)-L-tyrosine.","definition_xrefs":["PubMed:8702710","PubMed:12719529","RESID:AA0368","DeltaMass:0","PubMed:7115340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-(O4'-L-tyrosinyl)-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-[3-(4-[(2S)-2-amino-2-carboxyethyl]phenoxy)-4-hydroxyphenyl]propanoic acid","type":"exact"},{"name":"2-amino-3-[4-(5-[(2S)-2-amino-2-carboxyethyl]-2-hydroxyphenoxy)phenyl]propanoic acid","type":"exact"},{"name":"3'-(L-tyros-O4'-yl)-L-tyrosine","type":"exact"},{"name":"CROSSLNK Isodityrosine (Tyr-Tyr)","type":"exact"},{"name":"IsodiTyr (Crosslink)","type":"exact"},{"name":"O-(5-(2-amino-2-carboxyethyl)-2-hydroxyphenyl)-L-tyrosine","type":"exact"},{"name":"isodityrosine","type":"exact"}],"termid":"MOD:00373"}


id: PBO:0012566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex subunit, Csc4","termid":"PBO:0012566"}


id: PR:P79058
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug134 gene.","definition_xrefs":["UniProtKB:P79058","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA stability protein mug134 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.16","synonyms":[{"name":"Spom972h-mug134","type":"exact"},{"name":"initiation of G zero protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P79058"}


id: PR:O13785
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vesicle transport protein USE1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13050:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein use1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.07c","secondary_identifiers":["UniProtKB:O13785"],"synonyms":[{"name":"SPAC17G6.07c","type":"related"},{"name":"Spom972h-USE1","type":"exact"}],"termid":"PR:O13785"}


id: MONDO:0001528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the vulva.","definition_xrefs":["NCIT:C7502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"vulvar neoplasm","termid":"MONDO:0021049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulva cancer","secondary_identifiers":["MEDGEN:91196","MESH:D014846","SCTID:363367000","UMLS:C0375071","ICD9:184.4","DOID:1245"],"synonyms":[{"name":"Ca vulva","type":"exact"},{"name":"cancer of mammalian vulva","type":"exact"},{"name":"malignant mammalian vulva neoplasm","type":"exact"},{"name":"malignant neoplasm of mammalian vulva","type":"exact"},{"name":"malignant neoplasm of the vulva","type":"exact"},{"name":"malignant neoplasm of vulva","type":"exact"},{"name":"malignant neoplasm of vulva unspecified","type":"exact"},{"name":"malignant neoplasm of vulva, unspecified","type":"exact"},{"name":"malignant tumor of the vulva","type":"exact"},{"name":"malignant tumor of vulva","type":"exact"},{"name":"malignant tumour of the vulva","type":"exact"},{"name":"malignant tumour of vulva","type":"exact"},{"name":"malignant vulva neoplasm","type":"exact"},{"name":"malignant vulva tumor","type":"exact"},{"name":"malignant vulva tumour","type":"exact"},{"name":"malignant vulvar neoplasm","type":"exact"},{"name":"malignant vulvar tumor","type":"exact"},{"name":"malignant vulvar tumour","type":"exact"},{"name":"mammalian vulva cancer","type":"exact"},{"name":"neoplasm of vulva","type":"broad"},{"name":"vulval cancer","type":"exact"},{"name":"vulval neoplasm","type":"broad"},{"name":"vulvar cancer","type":"exact"},{"name":"vulvar tumour","type":"broad"}],"termid":"MONDO:0001528","xrefs":{"Monarch":{"xref_id":"0001528"}}}


id: GO:1904925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of autophagy of the mitochondrion in response to mitochondrial depolarization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:PARL","GOC:pad","PMID:22020285"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of autophagy of mitochondrion in response to mitochondrial depolarization (obsolete GO:1904925)","termid":"GO:1904925"}


id: GO:0001052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a bacterial-type plastid PEP RNA polymerase core enzyme, typically consisting of two alpha, one beta, one beta prime, and one double prime subunit.","definition_xrefs":["PMID:20701995","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial-type RNA polymerase core enzyme binding","termid":"GO:0001000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"plastid PEP RNA polymerase core enzyme binding","termid":"GO:0001052"}


id: GO:1903747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of protein localization to mitochondrion.","definition_xrefs":["PMID:16857185","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of protein localization","termid":"GO:0070201"},{"relation_name":"regulates","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of protein localization to mitochondrion","synonyms":[{"name":"regulation of establishment of protein localisation to mitochondrion","type":"exact"},{"name":"regulation of establishment of protein localization in mitochondrion","type":"exact"}],"termid":"GO:1903747"}


id: PBO:0066928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 230","termid":"PBO:0066928"}


id: PBO:0059854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 7","termid":"PBO:0059854"}


id: PBO:0073499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGSM3 antisense RNA 1","termid":"PBO:0073499"}


id: PBO:0054169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1541","termid":"PBO:0054169"}


id: PBO:0044653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 4","termid":"PBO:0044653"}


id: PBO:0030029
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_adenylyl_cyclase_activity","termid":"PBO:0030029"}


id: PBO:0079369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 3","termid":"PBO:0079369"}


id: FYPO:0003065
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the microtubule cytoskeleton is abnormal during conjugation with cellular fusion.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology","termid":"FYPO:0003064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0002399"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton morphology during mating","synonyms":[{"name":"abnormal microtubule cytoskeleton morphology during conjugation with cellular fusion","type":"exact"},{"name":"abnormal microtubule cytoskeleton morphology during karyogamy","type":"related"}],"termid":"FYPO:0003065"}


id: PBO:0083435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YLR040C","termid":"PBO:0083435"}


id: MONDO:0005085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A wedge-shaped fibrovascular lesion arising from the bulbar conjunctiva and extending to the cornea. It is caused by chronic exposure to solar ultraviolet radiation, heat, and dust. It may cause severe vision loss. Studies have linked pterygium to neoplastic proliferation and suggest that it may be a stem cell disorder.","definition_xrefs":["NCIT:C133744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign conjunctival neoplasm","termid":"MONDO:0006105"},{"relation_name":"is_a","term_name":"benign neoplasm of cornea","termid":"MONDO:0021452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pterygium","secondary_identifiers":["ICD9:372.40","UMLS:C0033999","DOID:0002116","ICD9:372.4","MEDGEN:46202","SCTID:77489003","ICD10CM:H11.0","icd11.foundation:1207385905","MESH:D011625","EFO:0000678"],"synonyms":[{"name":"pterygium of conjunctiva and cornea","type":"exact"},{"name":"surfer's eye","type":"exact"}],"termid":"MONDO:0005085","xrefs":{"Monarch":{"xref_id":"0005085"}}}


id: PBO:0066607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member V","termid":"PBO:0066607"}


id: GO:0046390
data:
  {"annotated_genes":["SJAG_00533","SJAG_00542","SJAG_00964","SJAG_03355","SJAG_02038","SJAG_00694","SJAG_03925","SJAG_04709","SJAG_07003","SJAG_03811","SJAG_04123","SJAG_03140","SJAG_03759","SJAG_05024","SJAG_01081","SJAG_00197","SJAG_00444","SJAG_03708","SJAG_02887","SJAG_01298","SJAG_03114","SJAG_MIT15","SJAG_01070","SJAG_00915","SJAG_06634","SJAG_00985","SJAG_03164","SJAG_04634","SJAG_04422","SJAG_MIT09","SJAG_02564","SJAG_00438","SJAG_04713","SJAG_01814","SJAG_05204","SJAG_00044","SJAG_04882","SJAG_02364","SJAG_04845","SJAG_04849","SJAG_04681","SJAG_00779","SJAG_04122","SJAG_01661","SJAG_02850","SJAG_00836","SJAG_02598","SJAG_MIT37","SJAG_04970","SJAG_04354","SJAG_02105","SJAG_00133","SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74507],"is_not":false,"summary":null,"term":"GO:0046390"},{"annotations":[79163,77147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[63432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[77119,60172,65604,58024,57119,64592,72115,70325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[62025,57253,59192,61265,59526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[74226,63663,72780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006015"},{"annotations":[72292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[74298,57108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[80744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[68257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[64652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[68259,93300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[73054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[59525,63169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[101533,75993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[64650,102577,75213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[65105,75994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[118401],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[104021,93610,94198,89453,105366,119469,119475,108172,109156,116233,102158,103377,95181,103995,108264,93183,119463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[80746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[68258,87785,88772,92299,93301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[64651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"},{"annotations":[75995,108640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ribose phosphate, any phosphorylated ribose sugar.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribose phosphate metabolic process","termid":"GO:0019693"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic 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phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"ribose phosphate anabolism","type":"exact"},{"name":"ribose phosphate biosynthesis","type":"exact"},{"name":"ribose phosphate formation","type":"exact"},{"name":"ribose phosphate synthesis","type":"exact"}],"termid":"GO:0046390","terms_by_termid":{"GO:0006015":null,"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006189":null,"GO:0006225":null,"GO:0006228":null,"GO:0006241":null,"GO:0009224":null,"GO:0009398":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0042776":null,"GO:0044205":null,"GO:0044206":null,"GO:0044208":null,"GO:0044209":null,"GO:0044210":null,"GO:0044211":null,"GO:0046390":null,"GO:0046705":null,"GO:1905707":null}}


id: SO:1001190
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is alternately spliced, and encodes more than one polypeptide, that have overlapping peptide sequences, but use different stop codons.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encodes_overlapping_peptides","termid":"SO:1001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_different_polypeptides_different_stop","synonyms":[{"name":"encodes different polypeptides different stop","type":"exact"}],"termid":"SO:1001190"}


id: FYPO:0002046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells in a population show decreased sensitivity to a stress. Typically, a cell population is deemed resistant to a stress if cells in the population grow and divide when exposed to the stress at an intensity at which wild-type cells stop growing (and may die).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell population growth","termid":"FYPO:0000045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to stress","synonyms":[{"name":"increased cell population growth during cellular response to stress","type":"exact"},{"name":"increased growth during cellular response to stress","type":"exact"},{"name":"resistant to stress","type":"exact"},{"name":"stress resistance: increased","type":"related"}],"termid":"FYPO:0002046"}


id: GO:0003951
data:
  {"annotated_genes":["SJAG_01582","SJAG_03946","SJAG_01566"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71475,78282,80188],"is_not":false,"summary":null,"term":"GO:0003951"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + NAD+ = ADP + H+ + NADP+.","definition_xrefs":["RHEA:18629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01566":null,"SJAG_01582":null,"SJAG_03946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NAD+ kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:NAD-KIN-RXN","Reactome:R-HSA-197198","EC:2.7.1.23","Reactome:R-HSA-8955030","KEGG_REACTION:R00104"],"synonyms":[{"name":"ATP:NAD+ 2'-phosphotransferase activity","type":"related"},{"name":"DPN kinase activity","type":"related"},{"name":"NAD kinase activity","type":"exact"},{"name":"NADK","type":"related"},{"name":"nicotinamide adenine dinucleotide kinase (phosphorylating)","type":"related"},{"name":"nicotinamide adenine dinucleotide kinase activity","type":"related"}],"termid":"GO:0003951","terms_by_termid":{"GO:0003951":null}}


id: GO:1904601
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108503,116569],"is_not":false,"summary":null,"term":"GO:1904601"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to a location within an actin fusion focus.","definition_xrefs":["GOC:TermGenie","PMID:25825517","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"protein transport to mating projection actin fusion focus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in actin fusion focus","type":"exact"},{"name":"protein localisation to actin fusion focus","type":"exact"},{"name":"protein localization in actin fusion focus","type":"exact"}],"termid":"GO:1904601","terms_by_termid":{"GO:1904601":null}}


id: MONDO:0957274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 89, autosomal recessive","secondary_identifiers":["MEDGEN:1841167","OMIM:620379","DOID:0070458","UMLS:C5830531"],"termid":"MONDO:0957274","xrefs":{"Monarch":{"xref_id":"0957274"}}}


id: PBO:0025473
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase deficiency","termid":"PBO:0025473"}


id: MONDO:0800328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 94, variable age at onset","secondary_identifiers":["MEDGEN:1805655","UMLS:C5676889"],"synonyms":[{"name":"RP94","type":"exact"}],"termid":"MONDO:0800328","xrefs":{"Monarch":{"xref_id":"0800328"}}}


id: MONDO:0014376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual developmental disorder with microcephaly and with or without ocular malformations or hypogonadotropic hypogonadism","secondary_identifiers":["OMIM:615866","GARD:16023","UMLS:C4014528","MEDGEN:862965","DOID:0070057"],"synonyms":[{"name":"CSS9","type":"exact"},{"name":"Coffin-Siris syndrome 9","type":"exact"},{"name":"MRD27","type":"exact"},{"name":"autosomal dominant intellectual disability 27","type":"exact"},{"name":"autosomal dominant mental retardation 27","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 27","type":"related"},{"name":"intellectual disability, autosomal dominant 27","type":"exact"},{"name":"intellectual disability, autosomal dominant type 27","type":"exact"},{"name":"mental retardation, autosomal dominant 27","type":"related"},{"name":"mental retardation, autosomal dominant type 27","type":"exact"}],"termid":"MONDO:0014376","xrefs":{"Monarch":{"xref_id":"0014376"}}}


id: MONDO:0011469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital amegakaryocytic thrombocytopenia (obsolete MONDO:0011469)","secondary_identifiers":["NANDO:2200651"],"termid":"MONDO:0011469","xrefs":{"Monarch":{"xref_id":"0011469"}}}


id: GO:0035341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of inosine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleoside transport","termid":"GO:0032245"},{"relation_name":"regulates","term_name":"inosine transport","termid":"GO:0035340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of inosine transport","synonyms":[{"name":"regulation of hypoxanthine riboside transport","type":"exact"}],"termid":"GO:0035341"}


id: GO:0039512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host protein tyrosine kinase activity.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host protein tyrosine kinase activity (obsolete GO:0039512)","synonyms":[{"name":"down-regulation by virus of host protein tyrosine kinase activity","type":"exact"},{"name":"downregulation by virus of host protein tyrosine kinase activity","type":"exact"},{"name":"inhibition by virus of host protein tyrosine kinase activity","type":"narrow"},{"name":"negative regulation by virus of host protein tyrosine kinase activity","type":"exact"}],"termid":"GO:0039512"}


id: MONDO:0010685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 1, X-linked","secondary_identifiers":["MEDGEN:326540","MESH:C564091","OMIM:310460","UMLS:C1839612"],"synonyms":[{"name":"MYP1","type":"exact"},{"name":"myopia 1, X-linked","type":"exact"},{"name":"myopia-1, X-linked recessive","type":"exact"}],"termid":"MONDO:0010685","xrefs":{"Monarch":{"xref_id":"0010685"}}}


id: PBO:0034327
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_starts_during_or_after","termid":"PBO:0034327"}


id: PBO:0074687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 67","termid":"PBO:0074687"}


id: GO:0001680
data:
  {"annotated_genes":["SJAG_01704","SJAG_02288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70658,75285],"is_not":false,"summary":null,"term":"GO:0001680"}]},"cv_name":"biological_process","definition":"Post-transcriptional addition of the terminal 3' CCA sequence to a tRNA which does not encode this sequence within the primary transcript. CCA addition proceeds by the sequential addition of CTP, CTP, and then ATP to the 3' end of the tRNA, yielding a diphosphate with each nucleotide addition.","definition_xrefs":["PMID:2247609","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA 3'-end processing","termid":"GO:0042780"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01704":null,"SJAG_02288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA 3'-terminal CCA addition","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0001680","terms_by_termid":{"GO:0001680":null}}


id: PBO:0072394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 20","termid":"PBO:0072394"}


id: PBO:0054920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2334","termid":"PBO:0054920"}


id: MONDO:0013034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any striate palmoplantar keratoderma in which the cause of the disease is a mutation in the DSP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striate palmoplantar keratoderma","termid":"MONDO:0018865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratosis palmoplantaris striata 2","secondary_identifiers":["MEDGEN:343725","GARD:15590","DOID:0081109","MESH:C565102","OMIM:612908","UMLS:C1852127"],"synonyms":[{"name":"DSP striate palmoplantar keratoderma","type":"exact"},{"name":"PPKS2","type":"related"},{"name":"keratoderma, palmoplantar, striate form 2","type":"related"},{"name":"keratosis palmoplantaris striata II","type":"related"},{"name":"keratosis palmoplantaris striata type 2","type":"exact"},{"name":"striate palmoplantar keratoderma 2","type":"related"},{"name":"striate palmoplantar keratoderma caused by mutation in DSP","type":"exact"}],"termid":"MONDO:0013034","xrefs":{"Monarch":{"xref_id":"0013034"}}}


id: PBO:0090245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase inhibitor and disassembly protein linked to MTOR","termid":"PBO:0090245"}


id: MONDO:0013139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant severe congenital neutropenia in which the cause of the disease is a mutation in the GFI1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant severe congenital neutropenia","termid":"MONDO:0008742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0000426","MONDO:0005046"],"is_obsolete":false,"name":"neutropenia, severe congenital, 2, autosomal dominant","secondary_identifiers":["GARD:15616","DOID:0112131","MEDGEN:413975","MESH:C567748","OMIM:613107","UMLS:C2751288"],"synonyms":[{"name":"GFI1 autosomal dominant severe congenital neutropenia","type":"exact"},{"name":"SCN2","type":"related"},{"name":"autosomal dominant severe congenital neutropenia caused by mutation in GFI1","type":"exact"},{"name":"neutropenia, severe congenital 2, autosomal dominant","type":"exact"},{"name":"neutropenia, severe congenital, 2, autosomal dominant","type":"exact"}],"termid":"MONDO:0013139","xrefs":{"Monarch":{"xref_id":"0013139"}}}


id: MONDO:0023238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hamartoma","termid":"MONDO:0006499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"giant mammary hamartoma","secondary_identifiers":["MESH:C536818","MEDGEN:419055","UMLS:C2931343"],"synonyms":[{"name":"giant hamartoma of the breast","type":"related"}],"termid":"MONDO:0023238","xrefs":{"Monarch":{"xref_id":"0023238"}}}


id: PBO:0026651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_binding_during_cellular_response_to_hydroxyurea","termid":"PBO:0026651"}


id: GO:0030363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity required for the process of mRNA cleavage.","definition_xrefs":["PMID:10357856","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-mRNA cleavage factor activity (obsolete GO:0030363)","synonyms":[{"name":"pre-mRNA cleavage factor activity","type":"exact"}],"termid":"GO:0030363"}


id: PBO:0065083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis associated non-protein coding RNA induced by stress","termid":"PBO:0065083"}


id: MONDO:0004674
data:
  {"annotated_genes":["SJAG_00856","SJAG_01756"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009624"},{"annotations":[85587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014592"}]},"cv_name":"mondo","definition":"Inflammation of the distal posterior uveal tract (choroid) and its structural and vascular attachments to the retina. It is usually caused by infection and though rare, it is clinically significant due to its most serious sequela: loss of vision.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveitis","termid":"MONDO:0020283"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"chorioretinitis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0012424","UMLS:C0008513","MESH:D002825","NCIT:C110923","ICD9:363.20","SCTID:46627006","GARD:6060","MEDGEN:942","DOID:8886"],"synonyms":[{"name":"chorioretinitis","type":"exact"},{"name":"chorioretinitis (disease)","type":"exact"},{"name":"retinochoroiditis","type":"exact"}],"termid":"MONDO:0004674","terms_by_termid":{"MONDO:0009624":null,"MONDO:0014592":null},"xrefs":{"Monarch":{"xref_id":"0004674"}}}


id: RO:0002608
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Inverse of 'causal agent in'","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_causal_agent","termid":"RO:0002608"}


id: PBO:0053549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 556","termid":"PBO:0053549"}


id: MOD:00336
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts three L-cysteine residues, an L-aspartic acid residue and a two-iron two-sulfur cluster to tris-L-cysteinyl L-aspartato diiron disulfide.","definition_xrefs":["PubMed:10968624","PubMed:7947772","RESID:AA0331","PubMed:1312028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-aspartato diiron disulfide","synonyms":[{"name":"METAL Iron-sulfur (2Fe-2S)","type":"exact"},{"name":"di-mu-sulfido(bis-S-cysteinyliron)(S-cysteinyl-O4-aspartatoiron)","type":"exact"},{"name":"tris-L-cysteinyl L-aspartato diiron disulfide","type":"exact"}],"termid":"MOD:00336"}


id: PBO:0076684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 3","termid":"PBO:0076684"}


id: GO:0102083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydromonapterin = glycolaldehyde + 2-amino-6-(hydroxymethyl)-7,8-dihydropteridin-4-ol.","definition_xrefs":["GOC:pz","PMID:15107504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"7,8-dihydromonapterin aldolase activity","secondary_identifiers":["MetaCyc:RXN-10857"],"termid":"GO:0102083"}


id: GO:1905125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of glucosylceramidase activity.","definition_xrefs":["GOC:bf","GOC:PARL","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glucosylceramidase activity (obsolete GO:1905125)","synonyms":[{"name":"activation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"narrow"},{"name":"activation of GlcCer-beta-glucosidase activity","type":"narrow"},{"name":"activation of acid beta-glucosidase activity","type":"narrow"},{"name":"activation of beta-D-glucocerebrosidase activity","type":"narrow"},{"name":"activation of beta-glucocerebrosidase activity","type":"narrow"},{"name":"activation of beta-glucosylceramidase activity","type":"narrow"},{"name":"activation of ceramide glucosidase activity","type":"narrow"},{"name":"activation of glucocerebrosidase activity","type":"narrow"},{"name":"activation of glucosphingosine glucosylhydrolase activity","type":"narrow"},{"name":"activation of glucosylceramidase activity","type":"narrow"},{"name":"activation of glucosylcerebrosidase activity","type":"narrow"},{"name":"activation of glucosylsphingosine beta-D-glucosidase activity","type":"narrow"},{"name":"activation of glucosylsphingosine beta-glucosidase activity","type":"narrow"},{"name":"activation of psychosine hydrolase activity","type":"narrow"},{"name":"positive regulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"positive regulation of GCase activity","type":"exact"},{"name":"positive regulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"positive regulation of acid beta-glucosidase activity","type":"exact"},{"name":"positive regulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"positive regulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"positive regulation of beta-glucosylceramidase activity","type":"exact"},{"name":"positive regulation of ceramide glucosidase activity","type":"exact"},{"name":"positive regulation of glucocerebrosidase activity","type":"exact"},{"name":"positive regulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"positive regulation of glucosylcerebrosidase activity","type":"exact"},{"name":"positive regulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"positive regulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"positive regulation of psychosine hydrolase activity","type":"exact"},{"name":"up regulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"up regulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"up regulation of acid beta-glucosidase activity","type":"exact"},{"name":"up regulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"up regulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"up regulation of beta-glucosylceramidase activity","type":"exact"},{"name":"up regulation of ceramide glucosidase activity","type":"exact"},{"name":"up regulation of glucocerebrosidase activity","type":"exact"},{"name":"up regulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"up regulation of glucosylceramidase activity","type":"exact"},{"name":"up regulation of glucosylcerebrosidase activity","type":"exact"},{"name":"up regulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"up regulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"up regulation of psychosine hydrolase activity","type":"exact"},{"name":"up-regulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"up-regulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"up-regulation of acid beta-glucosidase activity","type":"exact"},{"name":"up-regulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"up-regulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"up-regulation of beta-glucosylceramidase activity","type":"exact"},{"name":"up-regulation of ceramide glucosidase activity","type":"exact"},{"name":"up-regulation of glucocerebrosidase activity","type":"exact"},{"name":"up-regulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"up-regulation of glucosylceramidase activity","type":"exact"},{"name":"up-regulation of glucosylcerebrosidase activity","type":"exact"},{"name":"up-regulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"up-regulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"up-regulation of psychosine hydrolase activity","type":"exact"},{"name":"upregulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"upregulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"upregulation of acid beta-glucosidase activity","type":"exact"},{"name":"upregulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"upregulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"upregulation of beta-glucosylceramidase activity","type":"exact"},{"name":"upregulation of ceramide glucosidase activity","type":"exact"},{"name":"upregulation of glucocerebrosidase activity","type":"exact"},{"name":"upregulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"upregulation of glucosylceramidase activity","type":"exact"},{"name":"upregulation of glucosylcerebrosidase activity","type":"exact"},{"name":"upregulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"upregulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"upregulation of psychosine hydrolase activity","type":"exact"}],"termid":"GO:1905125"}


id: PBO:0003714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vezatin family","termid":"PBO:0003714"}


id: GO:0018261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The guanylylation of peptidyl-lysine to form peptidyl-N6-(phospho-5'-guanosine)-L-lysine.","definition_xrefs":["RESID:AA0228"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine guanylylation (obsolete GO:0018261)","termid":"GO:0018261"}


id: GO:0005753
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A proton-transporting ATP synthase complex found in the mitochondrial membrane.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial proton-transporting ATP synthase complex (obsolete GO:0005753)","synonyms":[{"name":"mitochondrial respiratory chain complex V","type":"exact"}],"termid":"GO:0005753"}


id: GO:0019070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes involved in creating a mature, stable viral genome. Begins after genome replication with a newly synthesized nucleic acid and ends when the genome is ready to be packaged. Includes the addition of proteins to the newly synthesized genome, and DNA repair processes.","definition_xrefs":["GOC:pk","PMID:21490093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"virion assembly","termid":"GO:0019068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome maturation","secondary_identifiers":["Reactome:R-HSA-168330"],"termid":"GO:0019070"}


id: GO:0120518
data:
  {"annotated_genes":["SJAG_04131","SJAG_01826"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103924,115734],"is_not":false,"summary":null,"term":"GO:0120518"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + N-terminal L-methionyl-[protein] = CoA + H+ + N-terminal N(alpha)-acetyl-L-methionyl-[protein].","definition_xrefs":["RHEA:75239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N-terminal amino-acid acetyltransferase activity","termid":"GO:0004596"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01826":null,"SJAG_04131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0034212","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"protein N-terminal-methionine acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"peptide-methionine-alpha-N-acetyltransferase activity","type":"exact"}],"termid":"GO:0120518","terms_by_termid":{"GO:0120518":null}}


id: GO:0085001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a stylet, a hollow protrusible spear-like symbiont structure projected into the host cell for the purpose of obtaining nutrients. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of specialized structure for nutrient acquisition","termid":"GO:0052093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of stylet for nutrient acquisition","synonyms":[{"name":"formation by symbiont of stylet for nutrient acquisition from host","type":"related"}],"termid":"GO:0085001"}


id: MONDO:0007728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial acne inversa in which the cause of the disease is a mutation in the NCSTN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial acne inversa","termid":"MONDO:0024516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acne inversa, familial, 1","secondary_identifiers":["OMIM:142690","MEDGEN:1631104","UMLS:C4551962"],"synonyms":[{"name":"ACNINV1","type":"related"},{"name":"NCSTN familial acne inversa","type":"exact"},{"name":"acne inversa, familial","type":"related"},{"name":"acne inversa, familial, 1","type":"exact"},{"name":"acne inversa, familial, type 1","type":"exact"},{"name":"familial acne inversa caused by mutation in NCSTN","type":"exact"},{"name":"hidradenitis suppurativa, familial","type":"related"}],"termid":"MONDO:0007728","xrefs":{"Monarch":{"xref_id":"0007728"}}}


id: GO:0102838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-16:2-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-16:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-16:2-monogalactosyldiacylglycerol desaturase activity (obsolete GO:0102838)","termid":"GO:0102838"}


id: GO:0032225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dopaminergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter dopamine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"synaptic transmission, dopaminergic","termid":"GO:0001963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic transmission, dopaminergic","termid":"GO:0032225"}


id: FYPO:0005336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular histone level","termid":"FYPO:0004981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal level of histone H3 in cell","synonyms":[{"name":"normal accumulation of histone H3 in cell","type":"related"},{"name":"normal cellular histone H3 level","type":"exact"},{"name":"normal histone H3 level during vegetative growth","type":"exact"},{"name":"normal level of histone H3 in cell during mitotic cell cycle","type":"related"},{"name":"normal level of histone H3 in cell during vegetative growth","type":"exact"}],"termid":"FYPO:0005336"}


id: PBO:0076212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ubiquitin like modifier 3","termid":"PBO:0076212"}


id: GO:1901101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving gramicidin S.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00102"],"gene_count":0,"genotype_count":0,"name":"obsolete gramicidin S metabolic process (obsolete GO:1901101)","synonyms":[{"name":"gramicidin S metabolism","type":"exact"}],"termid":"GO:1901101"}


id: GO:0072048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate into the anatomical structures of the renal system.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system pattern specification","synonyms":[{"name":"renal system pattern formation","type":"related"}],"termid":"GO:0072048"}


id: MONDO:0011332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dyserythropoiesis, congenital, with ultrastructurally normal erythroblast heterochromatin","secondary_identifiers":["MEDGEN:813565","OMIM:603529","UMLS:C3807235"],"synonyms":[{"name":"Dyserythropoiesis, congenital, with ultrastructurally normal erythroblast heterochromatin","type":"exact"}],"termid":"MONDO:0011332","xrefs":{"Monarch":{"xref_id":"0011332"}}}


id: MONDO:0001735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the paranasal sinus.","direct_ancestors":[{"relation_name":"is_a","term_name":"nasal disorder","termid":"MONDO:0002436"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"skull disorder","termid":"MONDO:0024654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paranasal sinus disorder","secondary_identifiers":["MEDGEN:14608","NCIT:C26843","ICD9:478.1","UMLS:C0030469","SCTID:7393007","DOID:1352","MESH:D010254","EFO:0009481"],"synonyms":[{"name":"disease of paranasal sinus","type":"exact"},{"name":"disease or disorder of paranasal sinus","type":"exact"},{"name":"disorder of nasal sinus","type":"exact"},{"name":"disorder of paranasal sinus","type":"exact"},{"name":"paranasal sinus disease","type":"exact"},{"name":"paranasal sinus disease or disorder","type":"exact"},{"name":"paranasal sinus disorder","type":"exact"},{"name":"sinus disorder","type":"exact"}],"termid":"MONDO:0001735","xrefs":{"Monarch":{"xref_id":"0001735"}}}


id: PBO:0041227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 43","termid":"PBO:0041227"}


id: MONDO:0015190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete leiomyosarcoma of small intestine (obsolete MONDO:0015190)","termid":"MONDO:0015190","xrefs":{"Monarch":{"xref_id":"0015190"}}}


id: FYPO:0004592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell becomes cut after it has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal mitosis following normal mitosis","termid":"FYPO:0004588"},{"relation_name":"is_a","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype following normal mitosis","termid":"FYPO:0004593"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000032","FYPO:0000004","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0000641","FYPO:0000337"],"is_obsolete":false,"name":"cut following normal mitosis","synonyms":[{"name":"cut following normal mitosis and interphase","type":"exact"},{"name":"cut following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"cut following normal mitosis during vegetative growth","type":"exact"},{"name":"cut following normal mitotic nuclear division","type":"exact"},{"name":"cut following normal nuclear division during mitotic cell cycle","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation with normal mitosis","type":"exact"}],"termid":"FYPO:0004592"}


id: GO:0140460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a Gram-negative bacterium.","definition_xrefs":["PMID:23664307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterium","termid":"GO:0009617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Gram-negative bacterium","termid":"GO:0140460"}


id: GO:0040011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of a cell or organism from one location to another.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotion","termid":"GO:0040011"}


id: FYPO:0008406
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abnorma and some of the protein is present in the cytoplasmic aggregates instead.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to endoplasmic reticulum with cytoplasmic aggregation","termid":"FYPO:0008406"}


id: PBO:0039604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member D","termid":"PBO:0039604"}


id: MONDO:0016974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm arising from the thymus. It may be associated with myasthenia gravis, pure red cell aplasia, and hypogammaglobulinemia. It includes thymoma type B1 which is a thymoma of low grade malignant potential, thymoma type B2 which is a thymoma of moderate malignancy, and thymoma type B3 which is also known as well differentiated thymic carcinoma.","definition_xrefs":["NCIT:C7114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"thymoma","termid":"MONDO:0006456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thymoma type B","secondary_identifiers":["ICD10CM:D15.0","MEDGEN:231253","Orphanet:263317","UMLS:C1328042","GARD:20893","DOID:3282"],"synonyms":[{"name":"Dendritic cell thymoma","type":"exact"},{"name":"dendritic cell thymoma","type":"exact"},{"name":"dendritic cell thymoma (disease)","type":"exact"},{"name":"epithelioid thymoma","type":"exact"},{"name":"plump cell thymoma","type":"exact"},{"name":"primary thymic epithelial neoplasm type B","type":"exact"},{"name":"primary thymic epithelial tumor type B","type":"exact"},{"name":"primary thymic epithelial tumour type B","type":"exact"},{"name":"thymoma type B","type":"exact"}],"termid":"MONDO:0016974","xrefs":{"Monarch":{"xref_id":"0016974"}}}


id: PBO:0028332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_sorbitol","termid":"PBO:0028332"}


id: MONDO:0012981
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85805],"is_not":false,"summary":null,"term":"MONDO:0012981"}]},"cv_name":"mondo","definition":"Any hereditary spherocytosis in which the cause of the disease is a mutation in the SLC4A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spherocytosis","termid":"MONDO:0019350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"hereditary spherocytosis type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15576","DOID:0110919","MEDGEN:436375","MESH:C567208","UMLS:C2675212","OMIM:612653"],"synonyms":[{"name":"HS4","type":"exact"},{"name":"SLC4A1 hereditary spherocytosis","type":"exact"},{"name":"SPH4","type":"exact"},{"name":"hereditary spherocytosis 4","type":"exact"},{"name":"hereditary spherocytosis caused by mutation in SLC4A1","type":"exact"},{"name":"spherocytosis, hereditary, 4","type":"related"},{"name":"spherocytosis, type 4","type":"related"}],"termid":"MONDO:0012981","terms_by_termid":{"MONDO:0012981":null},"xrefs":{"Monarch":{"xref_id":"0012981"}}}


id: PBO:0031864
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-qualifier","termid":"PBO:0031864"}


id: GO:0016110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tetraterpenoid compounds, terpenoids with eight isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetraterpenoid metabolic process","termid":"GO:0016108"},{"relation_name":"is_a","term_name":"terpenoid catabolic process","termid":"GO:0016115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"tetraterpenoid catabolic process","synonyms":[{"name":"tetraterpene catabolic process","type":"narrow"},{"name":"tetraterpene catabolism","type":"narrow"},{"name":"tetraterpenoid breakdown","type":"exact"},{"name":"tetraterpenoid catabolism","type":"exact"},{"name":"tetraterpenoid degradation","type":"exact"}],"termid":"GO:0016110"}


id: PBO:0083768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential non-ATPase regulatory subunit of the 26S proteasome; similar to another S. cerevisiae regulatory subunit, Rpn5p, as well as to mammalian proteasome subunits","termid":"PBO:0083768"}


id: PBO:0063210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP3 antisense RNA 1","termid":"PBO:0063210"}


id: PBO:0084399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lumazine synthase (DMRL synthase); catalyzes synthesis of immediate precursor to riboflavin; DMRL synthase stands for 6,7-dimethyl-8-ribityllumazine synthase","termid":"PBO:0084399"}


id: MONDO:1011211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coloboma that occurs in snow leopard.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coloboma, non-human animal","termid":"MONDO:1010319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coloboma, snow leopard","secondary_identifiers":["OMIA:000219-29064"],"termid":"MONDO:1011211","xrefs":{"Monarch":{"xref_id":"1011211"}}}


id: GO:0052794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of alpha-(2->3)-glycosidic linkages of terminal sialic residues in substrates.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete exo-alpha-(2->3)-sialidase activity (obsolete GO:0052794)","synonyms":[{"name":"exo-alpha-(2,3)-sialidase activity","type":"exact"},{"name":"exo-alpha-2,3-sialidase activity","type":"exact"}],"termid":"GO:0052794"}


id: GO:0006496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The glycosylation of a nitrogen atom of a free alpha amino terminal of a peptide.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete protein amino acid terminal N-glycosylation (obsolete GO:0006496)","synonyms":[{"name":"protein amino acid terminal N-glycosylation","type":"exact"}],"termid":"GO:0006496"}


id: PBO:0055779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LON peptidase N-terminal domain and ring finger 1","termid":"PBO:0055779"}


id: GO:1904764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a chaperone-mediated autophagy translocation complex into its constituent components.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","PMID:18644871","GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chaperone-mediated autophagy translocation complex disassembly","synonyms":[{"name":"CMA receptor complex disassembly","type":"related"},{"name":"CMA translocation complex disassembly","type":"exact"},{"name":"chaperone-mediated autophagy receptor complex disassembly","type":"related"}],"termid":"GO:1904764"}


id: GO:0045276
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A part of the respiratory chain located in the plasma membrane, containing about 10 polypeptide subunits including four redox centers: cytochrome b/b6, cytochrome c1 and an 2Fe-2S cluster. Catalyzes the oxidation of ubiquinol by oxidized cytochrome c1. Examples of this component are found in bacterial species.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane respiratory chain complex III (obsolete GO:0045276)","synonyms":[{"name":"plasma membrane coenzyme Q-cytochrome c oxidoreductase complex","type":"exact"},{"name":"plasma membrane coenzyme Q-cytochrome c reductase complex","type":"exact"},{"name":"plasma membrane cytochrome bc1 complex","type":"exact"},{"name":"plasma membrane ubiquinol-cytochrome-c reductase complex","type":"exact"},{"name":"respiratory chain complex III","type":"broad"},{"name":"ubiquinol-cytochrome c oxidoreductase complex","type":"broad"},{"name":"ubiquinol-cytochrome-c reductase complex","type":"broad"}],"termid":"GO:0045276"}


id: MONDO:0018335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete deep dermatophytosis (obsolete MONDO:0018335)","termid":"MONDO:0018335","xrefs":{"Monarch":{"xref_id":"0018335"}}}


id: MOD:00090
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to L-alanine amide.","definition_xrefs":["PubMed:952951","PubMed:2069951","RESID:AA0081","PubMed:8472537","PubMed:1377792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanine amide","synonyms":[{"name":"(2S)-2-aminopropanamide","type":"exact"},{"name":"AlaN","type":"exact"},{"name":"L-alanine amide","type":"exact"},{"name":"MOD_RES Alanine amide","type":"exact"},{"name":"alaninamide","type":"exact"},{"name":"amidated L-alanine","type":"exact"}],"termid":"MOD:00090"}


id: GO:0051464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of cortisol from a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cortisol secretion","termid":"GO:0051462"},{"relation_name":"is_a","term_name":"positive regulation of glucocorticoid secretion","termid":"GO:2000851"},{"relation_name":"positively_regulates","term_name":"cortisol secretion","termid":"GO:0043400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of cortisol secretion","synonyms":[{"name":"activation of cortisol secretion","type":"narrow"},{"name":"stimulation of cortisol secretion","type":"narrow"},{"name":"up regulation of cortisol secretion","type":"exact"},{"name":"up-regulation of cortisol secretion","type":"exact"},{"name":"upregulation of cortisol secretion","type":"exact"}],"termid":"GO:0051464"}


id: FYPO:0002095
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"increased protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"increased protein phosphorylation during cellular response to DNA damaging agent","type":"related"},{"name":"increased protein phosphorylation during response to DNA damage stimulus","type":"exact"}],"termid":"FYPO:0002095"}


id: PR:Q9UTN0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTN0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C139.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC139.03","synonyms":[{"name":"Spom972h-toe2","type":"exact"}],"termid":"PR:Q9UTN0"}


id: MONDO:0019857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypothyroidism due to transplacental passage of maternal thyroid-stimulating hormone (TSH)-binding inhibitory antibodies is a type of transient congenital hypothyroidism, a thyroid hormone deficiency that is not permanent.","definition_xrefs":["Orphanet:95715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transient congenital hypothyroidism due to maternal factor","termid":"MONDO:0016555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypothyroidism due to transplacental passage of maternal TSH-binding inhibitory antibodies","secondary_identifiers":["SCTID:717333002","UMLS:C4273914","MEDGEN:903571","GARD:19297"],"termid":"MONDO:0019857","xrefs":{"Monarch":{"xref_id":"0019857"}}}


id: PBO:0004174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER oxidoreductin Ero1a","termid":"PBO:0004174"}


id: PBO:0016989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG1 family mitochondrial ATPase Afg1 (predicted)","termid":"PBO:0016989"}


id: PBO:0080246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 9 pseudogene","termid":"PBO:0080246"}


id: GO:0070316
data:
  {"annotated_genes":["SJAG_03356","SJAG_03689","SJAG_02621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116371,99897,118494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070317"}]},"cv_name":"biological_process","definition":"A cell cycle process that modulates the rate or extent of the transition from the G0 quiescent state to the G1 phase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"G0 to G1 transition","termid":"GO:0045023"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03356":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of G0 to G1 transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070316","terms_by_termid":{"GO:0070317":null}}


id: PBO:0085646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in meiotic progression; mutants are delayed in meiotic nuclear division and are defective in synaptonemal complex assembly; possible membrane-localized protein; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0085646"}


id: PBO:0116191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-oxoprolinase (ATP-hydrolizing), Oxp1","termid":"PBO:0116191"}


id: RO:0008506
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship describing organisms that often occur together at the same time and space or in the same environment.","direct_ancestors":[{"relation_name":"is_a","term_name":"ecologically_related_to","termid":"RO:0002321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-occurs","termid":"RO:0008506"}


id: MONDO:0005618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A category of psychiatric disorders which are characterized by anxious feelings or fear often accompanied by physical symptoms associated with anxiety.","definition_xrefs":["NCIT:C2878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mental disorder","termid":"MONDO:0005084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anxiety disorder","secondary_identifiers":["SCTID:197480006","UMLS:C0003469","EFO:0006788","DOID:2030","ICD9:300.09","MEDGEN:361","MESH:D001008"],"synonyms":[{"name":"anxiety","type":"broad"},{"name":"anxiety disorder","type":"exact"},{"name":"anxiety state","type":"exact"}],"termid":"MONDO:0005618","xrefs":{"Monarch":{"xref_id":"0005618"}}}


id: GO:2000014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endosperm development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"endosperm development","termid":"GO:0009960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endosperm development","termid":"GO:2000014"}


id: PR:Q01663
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-1-like transcription factor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:1899230","PMID:15165244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AP-1-like transcription factor","termid":"PR:000027897"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1-like transcription factor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.07c","secondary_identifiers":["PR:000027898","UniProtKB:Q01663"],"synonyms":[{"name":"SPAC1783.07C","type":"related"},{"name":"Spom972h-pap1","type":"exact"}],"termid":"PR:Q01663"}


id: GO:0048294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching to IgE isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of isotype switching","termid":"GO:0045829"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgE isotypes","termid":"GO:0048293"},{"relation_name":"negatively_regulates","term_name":"isotype switching to IgE isotypes","termid":"GO:0048289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0010467","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of isotype switching to IgE isotypes","synonyms":[{"name":"down regulation of isotype switching to IgE isotypes","type":"exact"},{"name":"down-regulation of isotype switching to IgE isotypes","type":"exact"},{"name":"downregulation of isotype switching to IgE isotypes","type":"exact"},{"name":"inhibition of isotype switching to IgE isotypes","type":"narrow"},{"name":"negative regulation of class switch recombination to IgE isotypes","type":"exact"},{"name":"negative regulation of class switching to IgE isotypes","type":"exact"},{"name":"negative regulation of isotype switch recombination to IgE isotypes","type":"exact"}],"termid":"GO:0048294"}


id: PBO:0068065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 370","termid":"PBO:0068065"}


id: PBO:0094340
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malacards_human_source_gene","termid":"PBO:0094340"}


id: GO:0046329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the JNK cascade.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of JNK cascade","termid":"GO:0046328"},{"relation_name":"negatively_regulates","term_name":"JNK cascade","termid":"GO:0007254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of JNK cascade","synonyms":[{"name":"down regulation of JNK cascade","type":"exact"},{"name":"down-regulation of JNK cascade","type":"exact"},{"name":"downregulation of JNK cascade","type":"exact"},{"name":"inhibition of JNK cascade","type":"narrow"}],"termid":"GO:0046329"}


id: FYPO:0006161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is abolished during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin","termid":"FYPO:0001678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to chromatin during meiosis I","synonyms":[{"name":"abolished protein localisation to chromatin during meiosis I","type":"exact"},{"name":"abolished protein localization to chromatin during first meiotic nuclear division","type":"exact"},{"name":"protein localization to chromatin during meiosis I replication abolished","type":"exact"}],"termid":"FYPO:0006161"}


id: FYPO:0007853
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to centromere","synonyms":[{"name":"normal protein localisation to centromere","type":"exact"},{"name":"normal protein localisation to chromosome, centromeric region","type":"exact"},{"name":"normal protein localization to chromosome, centric region","type":"exact"},{"name":"normal protein localization to chromosome, centromeric region","type":"exact"}],"termid":"FYPO:0007853"}


id: GO:0001062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a plastid PEP-A RNA polymerase II specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH","PMID:20701995"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid PEP-A RNA polymerase activity (obsolete GO:0001062)","termid":"GO:0001062"}


id: MONDO:0019075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bosley-Salih-Alorainy syndrome (BSAS) is characterized by variable horizontal gaze dysfunction, profound and bilateral sensorineural deafness associated commonly with severe inner ear maldevelopment, cerebrovascular anomalies (ranging from unilateral internal carotid artery hypoplasia to bilateral agenesis), cardiac malformation, developmental delay and occasionally autism. The syndrome is caused by homozygous mutations in the HOXA1 gene (7p15.2) and is transmitted in an autosomal recessive manner. The syndrome overlaps clinically and genetically with Athabaskan brain dysfunction syndrome (ABDS,). However unlike ABDS, BSAS does not manifest central hypoventilation.","definition_xrefs":["Orphanet:69737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human HOXA1 syndromes","termid":"MONDO:0011099"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bosley-Salih-Alorainy syndrome","secondary_identifiers":["GARD:16684","icd11.foundation:1771217937","UMLS:C1832216","MEDGEN:321908"],"synonyms":[{"name":"BSAS","type":"exact"}],"termid":"MONDO:0019075","xrefs":{"Monarch":{"xref_id":"0019075"}}}


id: PBO:0077216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated 7 homolog B","termid":"PBO:0077216"}


id: PBO:0113098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrouridine synthase; member of a widespread family of conserved proteins including Smm1p, Dus1p, and Dus4p; modifies pre-tRNAs at U47 of the variable arm; contains a consensus oleate response element (ORE) in its promoter region; forms nuclear foci upon DNA replication stress","termid":"PBO:0113098"}


id: GO:0004802
data:
  {"annotated_genes":["SJAG_03934"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79870],"is_not":false,"summary":null,"term":"GO:0004802"}]},"cv_name":"molecular_function","definition":"Catalysis of the reversible transfer of a 2-carbon ketol group (CH2OH-CO-) from a ketose phosphate donor to an aldose phosphate acceptor.","definition_xrefs":["GOC:fmc","EC:2.2.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03934":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016744"],"is_obsolete":false,"name":"transketolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-163751","Reactome:R-HSA-71324","Reactome:R-HSA-163741","Reactome:R-HSA-71335"],"synonyms":[{"name":"fructose 6-phosphate:D-glyceraldehyde-3-phosphate glycolaldehydetransferase activity","type":"narrow"},{"name":"glycoaldehyde transferase activity","type":"related"},{"name":"glycolaldehydetransferase activity","type":"related"},{"name":"sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glycolaldehydetransferase activity","type":"narrow"}],"termid":"GO:0004802","terms_by_termid":{"GO:0004802":null}}


id: GO:0032609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-gamma due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Interferon-gamma is also known as type II interferon.","definition_xrefs":["PMID:15546383","GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"type II interferon production","secondary_identifiers":["GO:0042095","GO:0072643"],"synonyms":[{"name":"IFNG production","type":"exact"},{"name":"interferon-gamma biosynthetic process","type":"narrow"},{"name":"interferon-gamma production","type":"exact"},{"name":"interferon-gamma secretion","type":"narrow"},{"name":"type II IFN production","type":"exact"}],"termid":"GO:0032609"}


id: PBO:0042911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1 pseudogene 8","termid":"PBO:0042911"}


id: GO:0060099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phagocytosis","termid":"GO:0050764"},{"relation_name":"is_a","term_name":"regulation of membrane invagination","termid":"GO:1905153"},{"relation_name":"regulates","term_name":"phagocytosis, engulfment","termid":"GO:0006911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"regulation of phagocytosis, engulfment","termid":"GO:0060099"}


id: GO:0004461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + D-glucose = UDP + lactose.","definition_xrefs":["EC:2.4.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"lactose synthase activity","secondary_identifiers":["RHEA:12404","Reactome:R-HSA-5653878","MetaCyc:LACTOSE-SYNTHASE-RXN"],"synonyms":[{"name":"UDP-galactose-glucose galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:D-glucose 4-beta-D-galactotransferase activity","type":"related"},{"name":"UDPgalactose-glucose galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:D-glucose 4-beta-D-galactotransferase activity","type":"related"},{"name":"lactose synthetase activity","type":"related"},{"name":"uridine diphosphogalactose-glucose galactosyltransferase activity","type":"related"}],"termid":"GO:0004461"}


id: PBO:0050366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 69","termid":"PBO:0050366"}


id: PR:O13876
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypt4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.11c","synonyms":[{"name":"Spom972h-ypt4","type":"exact"}],"termid":"PR:O13876"}


id: MONDO:0018450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal muscular atrophy with respiratory distress type 2 is a rare, genetic, motor neuron disease characterized by progressive early respiratory failure associated with diaphragm paralysis, distal muscular weakness, joint contractures, and axial hypotonia with preserved antigravity limb movements. Phenotype overlaps considerably with SMARD type 1 but is differentiated by a mutation in a different gene.","definition_xrefs":["Orphanet:404521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spinal muscular atrophy with respiratory distress type 2","secondary_identifiers":["GARD:21723","MEDGEN:1658540","UMLS:C4749434"],"synonyms":[{"name":"SMARD2","type":"exact"},{"name":"X-linked spinal muscular atrophy with respiratory distress","type":"exact"},{"name":"diaphragmatic spinal muscular atrophy type 2","type":"exact"},{"name":"severe infantile axonal neuropathy with respiratory failure type 2","type":"exact"}],"termid":"MONDO:0018450","xrefs":{"Monarch":{"xref_id":"0018450"}}}


id: PBO:0065590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 6","termid":"PBO:0065590"}


id: PBO:0001655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQGAP","termid":"PBO:0001655"}


id: GO:0002155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a thyroid hormone mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"thyroid hormone receptor signaling pathway","termid":"GO:0002154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of thyroid hormone receptor signaling pathway","synonyms":[{"name":"regulation of thyroid hormone mediated signaling pathway","type":"exact"},{"name":"regulation of thyroid hormone mediated signalling pathway","type":"exact"}],"termid":"GO:0002155"}


id: PBO:0087404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Structural component of the meiotic outer plaque; outer plaque is a membrane-organizing center that assembles on the cytoplasmic face of the spindle pole body during meiosis II and triggers the formation of the prospore membrane","termid":"PBO:0087404"}


id: PBO:0042632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 7 pseudogene","termid":"PBO:0042632"}


id: GO:0010884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of lipid storage. Lipid storage is the accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid storage","termid":"GO:0010883"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of lipid localization","termid":"GO:1905954"},{"relation_name":"positively_regulates","term_name":"lipid storage","termid":"GO:0019915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipid storage","synonyms":[{"name":"positive regulation of lipid sequestration","type":"narrow"}],"termid":"GO:0010884"}


id: PBO:0039812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 4 pseudogene 3","termid":"PBO:0039812"}


id: PBO:0039914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 12","termid":"PBO:0039914"}


id: GO:0019436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sophorosyloxydocosanoate, 13-sophorosyloxydocosanoate 6',6''-diacetate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid catabolic process","termid":"GO:0019377"},{"relation_name":"is_a","term_name":"sophorosyloxydocosanoate metabolic process","termid":"GO:0019434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sophorosyloxydocosanoate catabolic process","secondary_identifiers":["MetaCyc:SOPHOROSYLOXYDOCOSANOATE-DEG-PWY"],"synonyms":[{"name":"sophorosyloxydocosanoate breakdown","type":"exact"},{"name":"sophorosyloxydocosanoate catabolism","type":"exact"},{"name":"sophorosyloxydocosanoate degradation","type":"exact"}],"termid":"GO:0019436"}


id: MONDO:0002482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises in the area of the nipple.","definition_xrefs":["NCIT:C5212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nipple neoplasm","secondary_identifiers":["UMLS:C1112166","MEDGEN:205111","DOID:3003"],"synonyms":[{"name":"neoplasm of nipple","type":"exact"},{"name":"neoplasm of the nipple","type":"exact"},{"name":"nipple neoplasm","type":"exact"},{"name":"nipple neoplasm (disease)","type":"exact"},{"name":"nipple tumor","type":"exact"},{"name":"nipple tumour","type":"exact"},{"name":"tumor of nipple","type":"exact"},{"name":"tumor of the nipple","type":"exact"},{"name":"tumour of nipple","type":"exact"},{"name":"tumour of the nipple","type":"exact"}],"termid":"MONDO:0002482","xrefs":{"Monarch":{"xref_id":"0002482"}}}


id: PBO:0085209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oxidoreductase of the mitochondrial inner membrane; involved in cytoplasmic and mitochondrial iron homeostasis and required for activity of Fe-S cluster-containing enzymes; one of the few mitochondrial proteins essential for viability","termid":"PBO:0085209"}


id: PBO:0056615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYST/Esa1-associated factor 6 pseudogene 1","termid":"PBO:0056615"}


id: MONDO:0019895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 4","termid":"MONDO:0016903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 4q","secondary_identifiers":["MEDGEN:1680190","Orphanet:96145","GARD:19327","UMLS:C5190514"],"synonyms":[{"name":"distal deletion 4q","type":"exact"},{"name":"distal monosomy type 4q","type":"exact"},{"name":"monosomy 4qter","type":"exact"},{"name":"telomeric deletion 4q","type":"exact"}],"termid":"MONDO:0019895","xrefs":{"Monarch":{"xref_id":"0019895"}}}


id: PBO:0059553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Thr (ACN)","termid":"PBO:0059553"}


id: PBO:0013452
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AceTaldehyde Dehydrogenase","termid":"PBO:0013452"}


id: PBO:0062283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 7 pseudogene","termid":"PBO:0062283"}


id: GO:0019320
data:
  {"annotated_genes":["SJAG_01310","SJAG_03373","SJAG_04334","SJAG_00839","SJAG_02796","SJAG_04192","SJAG_02107","SJAG_00461","SJAG_04495","SJAG_02135","SJAG_02950","SJAG_03903","SJAG_03828","SJAG_03660","SJAG_02369","SJAG_02945","SJAG_02954","SJAG_02951","SJAG_02009","SJAG_06622","SJAG_00027","SJAG_00605","SJAG_03818","SJAG_06621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103983,109760,103726,106182,116738,94858,106181,109759,105811,109765,95352,109762,109764,78197,98595,98324,109763,105812,109761,105810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[114115,114097,114104,114103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033499"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of hexose, any monosaccharide with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03818":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"hexose catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"hexose breakdown","type":"exact"},{"name":"hexose catabolism","type":"exact"},{"name":"hexose degradation","type":"exact"}],"termid":"GO:0019320","terms_by_termid":{"GO:0033499":null,"GO:0061621":null}}


id: PBO:0034604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_CRE_promoter","termid":"PBO:0034604"}


id: PBO:0034294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-visited_by","termid":"PBO:0034294"}


id: MONDO:0019147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The infection of a fly larva (maggot) in human tissue, which most commonly occurs in tropical climates. Affected tissues most commonly include skin, especially if open wounds are present, nasal passages, ears, and eyes.","definition_xrefs":["NCIT:C128400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic ectoparasitic infectious disease","termid":"MONDO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"myiasis","secondary_identifiers":["DOID:11080","SCTID:60412004","Orphanet:75110","MedDRA:10028586","UMLS:C0027030","MEDGEN:10148","EFO:0007389","icd11.foundation:1367149207","ICD9:134.0","GARD:18924","MESH:D009198"],"synonyms":[{"name":"infestation by fly larvae","type":"exact"},{"name":"infestation by maggots","type":"exact"},{"name":"maggot infestation","type":"exact"},{"name":"myiasis, unspecified","type":"exact"}],"termid":"MONDO:0019147","xrefs":{"Monarch":{"xref_id":"0019147"}}}


id: PBO:0011083
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate Km, ATP Km 1.9 mM","termid":"PBO:0011083"}


id: PBO:0066380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radixin","termid":"PBO:0066380"}


id: PBO:0041156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 11","termid":"PBO:0041156"}


id: PBO:0081671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF593 opposite strand","termid":"PBO:0081671"}


id: PBO:0062829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oncostatin M receptor","termid":"PBO:0062829"}


id: PBO:0083752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential core component of mitochondrial TIM22 complex; involved in insertion of polytopic proteins into inner membrane; forms channel through which proteins are imported; different regions of Tim22p have functionally diverse roles in recruiting partner subunits to core channel","termid":"PBO:0083752"}


id: PBO:0110107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane 1-phosphatidylinositol 4-kinase, type III-alpha Stt4","termid":"PBO:0110107"}


id: GO:0072507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent cations within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete divalent inorganic cation homeostasis (obsolete GO:0072507)","termid":"GO:0072507"}


id: PBO:0047973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1","termid":"PBO:0047973"}


id: GO:0043740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + 3 H2O = 2-amino-5-formylamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one + 2 H+ + 2 phosphate.","definition_xrefs":["EC:3.5.4.29","RHEA:22468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP cyclohydrolase activity","termid":"GO:0003933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"GTP cyclohydrolase IIa activity","secondary_identifiers":["MetaCyc:RXN-10055","KEGG_REACTION:R07306"],"synonyms":[{"name":"GTP 8,9-dihydrolase (phosphate-forming)","type":"related"},{"name":"GTP 8,9-hydrolase (phosphate-forming)","type":"exact"},{"name":"GTP cyclohydrolase III activity","type":"narrow"}],"termid":"GO:0043740"}


id: GO:0050558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-maltose = beta-maltose.","definition_xrefs":["EC:5.1.3.21","RHEA:21228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"maltose epimerase activity","secondary_identifiers":["KEGG_REACTION:R07319","MetaCyc:5.1.3.21-RXN"],"synonyms":[{"name":"maltose 1-epimerase activity","type":"related"}],"termid":"GO:0050558"}


id: MONDO:0010256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the IL1RAPL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 21","secondary_identifiers":["MEDGEN:1790509","GARD:22669","DOID:0112022","UMLS:C5551510","OMIM:300143"],"synonyms":[{"name":"IL1RAPL1 non-syndromic X-linked intellectual disability","type":"exact"},{"name":"MRX21","type":"related"},{"name":"intellectual developmental disorder, X-linked 21, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 21","type":"exact"},{"name":"intellectual disability, X-linked 34","type":"related"},{"name":"intellectual disability, X-linked type 21","type":"exact"},{"name":"mental retardation, X-linked 21","type":"related"},{"name":"mental retardation, X-linked 34","type":"related"},{"name":"mental retardation, X-linked type 21","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in IL1RAPL1","type":"exact"}],"termid":"MONDO:0010256","xrefs":{"Monarch":{"xref_id":"0010256"}}}


id: PBO:0066454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REXO1 like 6, pseudogene","termid":"PBO:0066454"}


id: MONDO:0003789
data:
  {"annotated_genes":["SJAG_01144"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86491],"is_not":false,"summary":null,"term":"MONDO:0003789"}]},"cv_name":"mondo","definition":"A familial carcinoma inherited in an autosomal dominant trait. It is characterized by the development of multiple, bilateral papillary renal cell carcinomas. The carcinomas range from microscopic lesions to clinically symptomatic tumors. It is associated with activating mutations of the MET oncogene.","definition_xrefs":["NCIT:C9222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary renal cell carcinoma","termid":"MONDO:0003008"},{"relation_name":"is_a","term_name":"papillary renal cell carcinoma","termid":"MONDO:0017884"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01144":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"hereditary papillary renal cell carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:6163","OMIM:605074","UMLS:C0879257","GARD:13157","MEDGEN:163907","SCTID:715561008","Orphanet:47044"],"synonyms":[{"name":"familial renal papillary carcinoma","type":"exact"},{"name":"hereditary kidney papillary carcinoma","type":"exact"},{"name":"hereditary papillary carcinoma of kidney","type":"exact"},{"name":"hereditary papillary carcinoma of the kidney","type":"exact"},{"name":"hereditary papillary renal carcinoma","type":"exact"},{"name":"hereditary papillary renal cell cancer","type":"exact"},{"name":"hereditary papillary renal cell carcinoma","type":"exact"},{"name":"renal cell carcinoma, papillary","type":"exact"},{"name":"renal cell carcinoma, papillary, 1, familial and somatic","type":"exact"}],"termid":"MONDO:0003789","terms_by_termid":{"MONDO:0003789":null},"xrefs":{"Monarch":{"xref_id":"0003789"}}}


