# terms

id: PBO:0109221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex component 2","termid":"PBO:0109221"}


id: PBO:0050013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, A","termid":"PBO:0050013"}


id: PBO:0031289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_sister_chromatid_segregation","termid":"PBO:0031289"}


id: PBO:0055877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 3C","termid":"PBO:0055877"}


id: PBO:0055746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA regulator of hepatic lineages 1","termid":"PBO:0055746"}


id: MONDO:0007574
data:
  {"annotated_genes":["SJAG_02885","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85978,85979],"is_not":false,"summary":null,"term":"MONDO:0007574"}]},"cv_name":"mondo","definition":"A subtype of autosomal dominant cerebellar ataxia type I (ADCA type I), characterized by papulosquamous, ichthyosiform plaques on the limbs appearing shortly after birth and later manifestations including progressive ataxia, dysarthria, nystagmus and decreased reflexes.","definition_xrefs":["Orphanet:1955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrokeratoderma","termid":"MONDO:0019270"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005093","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia type 34","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1851481","DOID:0050981","MESH:C535738","GARD:59","MEDGEN:338703","OMIM:133190","SCTID:719255000"],"synonyms":[{"name":"Erythrokeratodermia with Ataxia","type":"exact"},{"name":"Giroux Barbeau syndrome","type":"related"},{"name":"SCA34","type":"exact"},{"name":"erythrokeratodermia - ataxia","type":"related"},{"name":"erythrokeratodermia with ataxia","type":"exact"},{"name":"spinocerebellar ataxia 34","type":"related"},{"name":"spinocerebellar ataxia and erythrokeratodermia","type":"exact"},{"name":"spinocerebellar ataxia type 34","type":"exact"}],"termid":"MONDO:0007574","terms_by_termid":{"MONDO:0007574":null},"xrefs":{"Monarch":{"xref_id":"0007574"}}}


id: PBO:0075304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 2 pseudogene 2","termid":"PBO:0075304"}


id: FYPO:0005583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains higher levels of saturated fatty acids, and lower levels of unsaturated fatty acids, than normal.","definition_xrefs":["PMID:27053105","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased fatty acid saturation","synonyms":[{"name":"increased fatty acid saturation during mitotic cell cycle","type":"related"},{"name":"increased fatty acid saturation during vegetative growth","type":"exact"},{"name":"increased level of saturated fatty acids and decreased level of unsaturated fatty acids","type":"exact"},{"name":"increased saturated:unsaturated fatty acid ratio","type":"exact"}],"termid":"FYPO:0005583"}


id: MONDO:0043310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transient complete or partial monocular blindness due to retinal ischemia. This may be caused by emboli from the CAROTID ARTERY (usually in association with CAROTID STENOSIS) and other locations that enter the central RETINAL ARTERY. (From Adams et al., Principles of Neurology, 6th ed, p245)","definition_xrefs":["MESH:D020757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blindness (disorder)","termid":"MONDO:0001941"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amaurosis fugax","secondary_identifiers":["SCTID:88032003","icd11.foundation:691084626","NCIT:C84550","UMLS:C0149793","MEDGEN:57702"],"synonyms":[{"name":"amaurosis fugax","type":"exact"},{"name":"amaurosis fugax (one sided temporary vision loss)","type":"related"},{"name":"blindness, monocular, transient","type":"related"},{"name":"blindness, transient monocular","type":"related"},{"name":"momentary blindness","type":"related"},{"name":"monocular blindness, transient","type":"related"},{"name":"transient monocular blindness","type":"related"}],"termid":"MONDO:0043310","xrefs":{"Monarch":{"xref_id":"0043310"}}}


id: MONDO:0957978
data:
  {"annotated_genes":["SJAG_02007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86388],"is_not":false,"summary":null,"term":"MONDO:0957978"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"optic atrophy 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620629","MEDGEN:1851641","UMLS:C5882723"],"termid":"MONDO:0957978","terms_by_termid":{"MONDO:0957978":null},"xrefs":{"Monarch":{"xref_id":"0957978"}}}


id: PR:P48010
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A septin-14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.15c","secondary_identifiers":["UniProtKB:P48010"],"synonyms":[{"name":"Spom972h-SEPT14","type":"exact"},{"name":"mei4-dependent protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic expression up-regulated protein 28 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P48010"}


id: PBO:0084056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein (GAP) for Cin4p; tubulin folding factor C involved in beta-tubulin (Tub2p) folding; mutants display increased chromosome loss and benomyl sensitivity; human homolog RP2 complements yeast null mutant","termid":"PBO:0084056"}


id: PBO:0075035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-46","termid":"PBO:0075035"}


id: PBO:0045448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropyrimidinase","termid":"PBO:0045448"}


id: PBO:0052800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 40","termid":"PBO:0052800"}


id: MOD:00684
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to L-aspartic acid.","definition_xrefs":["RESID:AA0004#ASN","PubMed:9582379","PubMed:4399050","PubMed:5764436","PubMed:8089117","Unimod:7#N","PubMed:9521123","PubMed:6692818","PubMed:339692","PubMed:1097438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-aspartic acid residue","termid":"MOD:00013"},{"relation_name":"is_a","term_name":"deamidated residue","termid":"MOD:00400"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deamidated L-asparagine","synonyms":[{"name":"(2S)-2-aminobutanedioic acid","type":"exact"},{"name":"2-azanylbutanedioic acid","type":"exact"},{"name":"L-aspartic acid","type":"exact"},{"name":"MOD_RES Deamidated asparagine","type":"exact"},{"name":"aminosuccinic acid","type":"exact"},{"name":"dNAsn","type":"exact"}],"termid":"MOD:00684"}


id: GO:0060940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an epicardial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will mature into a cardiac fibroblast.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"},{"relation_name":"part_of","term_name":"epicardium-derived cardiac fibroblast cell development","termid":"GO:0060939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial to mesenchymal transition involved in cardiac fibroblast development","termid":"GO:0060940"}


id: PBO:0084518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; required for respiratory growth; null mutant displays induction of the unfolded protein response; homologous to worm Y62E10A.10/EMC-3, fly CG6750, human TMEM111","termid":"PBO:0084518"}


id: PBO:0012842
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Renal cell cancer","termid":"PBO:0012842"}


id: PBO:0082243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of farnesyltransferase and geranylgeranyltransferase-I; farnesyltransferase (Ram2p-Ram1p heterodimer) catalyzes the addition of 15-carbon isoprenoid farnesyl to substrate proteins containing a CAAX consensus motif; type I geranylgeranyltransferase (Ram2p-Cdc43p heterodimer) catalyzes the addition of the 20-carbon isoprenoid geranylgeranyl to substrate proteins containing a CaaL consensus motif; required for membrane localization of Ras proteins and a-factor","termid":"PBO:0082243"}


id: PBO:0062187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily P member 1 pseudogene","termid":"PBO:0062187"}


id: FYPO:0005543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of actomyosin contractile ring contraction is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000032","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0004803"],"is_obsolete":false,"name":"increased duration of actomyosin contractile ring contraction","synonyms":[{"name":"increased duration of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"increased duration of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"increased duration of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"prolonged actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0005543"}


id: SO:0001678
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element that is not part of the core promoter, but provides the promoter with a specific regulatory region.","definition_xrefs":["PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_promoter_element","synonyms":[{"name":"regulatory promoter element","type":"related"}],"termid":"SO:0001678"}


id: PBO:0080416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 subunit of GARP complex","termid":"PBO:0080416"}


id: GO:1900055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leaf senescence.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"leaf senescence","termid":"GO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leaf senescence","termid":"GO:1900055"}


id: GO:0060640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the formation of a tooth bud by the secretion of a signal from a mesenchymal cell and its reception and subsequent change in the identity of an epithelial cell of the tooth bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of odontogenesis of dentin-containing tooth","termid":"GO:0042488"},{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of dentin-containing tooth bud formation by mesenchymal-epithelial signaling","synonyms":[{"name":"positive regulation of dentine-containing tooth bud formation by mesenchymal-epithelial signaling","type":"related"},{"name":"positive regulation of dentine-containing tooth bud formation by mesenchymal-epithelial signalling","type":"exact"}],"termid":"GO:0060640"}


id: MONDO:0016604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysraphism-cleft lip/palate-limb reduction defects syndrome","secondary_identifiers":["MEDGEN:1809965","Orphanet:2476","UMLS:C5679624","GARD:3438"],"synonyms":[{"name":"Medeira-Dennis-Donnai syndrome","type":"exact"},{"name":"dysraphism, cleft lip/palate, limb reduction defects","type":"related"}],"termid":"MONDO:0016604","xrefs":{"Monarch":{"xref_id":"0016604"}}}


id: PBO:0046716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 2","termid":"PBO:0046716"}


id: FYPO:0003432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to histone H3 methylated on the lysine at position 9 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"normal histone H3K9me binding","synonyms":[{"name":"normal K9-methylated histone H3 binding","type":"exact"},{"name":"normal methylated histone H3K9me binding","type":"exact"}],"termid":"FYPO:0003432"}


id: PR:Q9USJ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4B3.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USJ6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)H-dependent FMN reductase C4B3.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.06c","synonyms":[{"name":"FMN reductase C4B3.06c (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FMN reductase [NAD(P)H] (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC4B3.06c","type":"exact"},{"name":"azoreductase C4B3.06c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USJ6"}


id: FYPO:0005880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form microtubules that are longer than normal and are curved, i.e. follow a smooth bend rather than a straight line, and extend around one or both ends of the cell, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:14663827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long curved interphase microtubules","termid":"FYPO:0004511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"long interphase microtubules curved around cell end","synonyms":[{"name":"elongated interphase microtubules curved around cell end","type":"exact"},{"name":"long cytoplasmic microtubules curved around cell end during interphase of mitotic cell cycle","type":"exact"},{"name":"long cytoplasmic microtubules curved around cell end during mitotic interphase","type":"exact"},{"name":"long interphase cytoplasmic microtubules curved around cell end","type":"exact"},{"name":"long interphase microtubules curved around cell end during vegetative growth","type":"exact"},{"name":"long interphase microtubules curved around cell tip","type":"exact"}],"termid":"FYPO:0005880"}


id: PBO:0044557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0044557"}


id: PBO:0027337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_phosphorylation_during_cellular_response_to_hydroxyurea","termid":"PBO:0027337"}


id: MONDO:0021542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma that involves the optic choroid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of choroid","termid":"MONDO:0021487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hemangioma of choroid","secondary_identifiers":["SCTID:255022003","UMLS:C0346390","ICD9:228.09","MEDGEN:83424","NCIT:C4562"],"synonyms":[{"name":"angioma of choroid","type":"exact"},{"name":"angioma of the choroid","type":"exact"},{"name":"benign angioma of choroid","type":"exact"},{"name":"benign angioma of the choroid","type":"exact"},{"name":"benign choroid angioma","type":"exact"},{"name":"benign choroid hemangioma","type":"exact"},{"name":"benign hemangioma of choroid","type":"exact"},{"name":"benign hemangioma of the choroid","type":"exact"},{"name":"choroid angioma","type":"exact"},{"name":"choroid hemangioma","type":"exact"},{"name":"hemangioma of optic choroid","type":"exact"},{"name":"hemangioma of the choroid","type":"exact"},{"name":"hemangioma, choroid, benign","type":"exact"},{"name":"optic choroid hemangioma","type":"exact"}],"termid":"MONDO:0021542","xrefs":{"Monarch":{"xref_id":"0021542"}}}


id: PBO:0027424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_salt_stress","termid":"PBO:0027424"}


id: GO:0099167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane of a symmetric synapse consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic specialization membrane of symmetric synapse (obsolete GO:0099167)","termid":"GO:0099167"}


id: PBO:0011115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic dynein intermediate light chain Dli1/Dil1","termid":"PBO:0011115"}


id: FYPO:0007033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of fluconazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to fluconazole","synonyms":[{"name":"resistance to fluconazole during mitotic cell cycle","type":"related"},{"name":"resistance to fluconazole during vegetative growth","type":"exact"},{"name":"resistant to fluconazole","type":"exact"}],"termid":"FYPO:0007033"}


id: SO:0000112
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo to which new deoxyribonucleotides can be added by DNA polymerase.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ss_oligo","termid":"SO:0000441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primer","secondary_identifiers":["http://en.wikipedia.org/wiki/Primer_(molecular_biology)"],"synonyms":[{"name":"DNA primer","type":"exact"},{"name":"primer oligonucleotide","type":"exact"},{"name":"primer polynucleotide","type":"exact"},{"name":"primer sequence","type":"exact"}],"termid":"SO:0000112"}


id: GO:0045838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane potential","synonyms":[{"name":"activation of membrane potential","type":"narrow"},{"name":"elevation of membrane potential","type":"exact"},{"name":"stimulation of membrane potential","type":"narrow"},{"name":"up regulation of membrane potential","type":"exact"},{"name":"up-regulation of membrane potential","type":"exact"},{"name":"upregulation of membrane potential","type":"exact"}],"termid":"GO:0045838"}


id: GO:0060689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features that characterize the cells of the salivary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"salivary gland development","termid":"GO:0007431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation involved in salivary gland development","termid":"GO:0060689"}


id: PBO:0065117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C theta","termid":"PBO:0065117"}


id: PBO:0077506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 223","termid":"PBO:0077506"}


id: GO:1905242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',5-triiodo-L-thyronine stimulus.","definition_xrefs":["PMID:21382270","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 3,3',5-triiodo-L-thyronine","synonyms":[{"name":"response to Liothyronin","type":"exact"},{"name":"response to Liothyronine","type":"exact"},{"name":"response to Liothyroninum","type":"exact"}],"termid":"GO:1905242"}


id: PBO:0069165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 417, pseudogene","termid":"PBO:0069165"}


id: PBO:0113132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of the nuclear pore complex (NPC) permeability barrier; involved in gene tethering at the nuclear periphery; relocalizes to the cytosol in response to hypoxia; Cdc5p-mediated phosphorylation leads to detachment and reattachment of nuclear basket during meiosis; both NUP1 and NUP60 are homologous to human NUP153","termid":"PBO:0113132"}


id: MONDO:0024404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete meningitis caused by anaerobic bacteria (obsolete MONDO:0024404)","termid":"MONDO:0024404","xrefs":{"Monarch":{"xref_id":"0024404"}}}


id: MONDO:0010840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic neurological disorder characterized by the presence of diffuse pachygyria and arachnoid cysts, psychomotor developmental delay and intellectual disability. Seizures (absence, atonic and generalized tonic-clonic) and, on occasion, headache are also associated.","definition_xrefs":["Orphanet:2798"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pachygyria-intellectual disability-epilepsy syndrome","secondary_identifiers":["MEDGEN:333107","MESH:C538091","SCTID:763861000","UMLS:C1838491","OMIM:600176","GARD:409"],"synonyms":[{"name":"Kuzniecky syndrome","type":"exact"},{"name":"pachygyria with intellectual disability and seizures","type":"related"},{"name":"pachygyria with intellectual disability, seizures, and arachnoid cysts","type":"related"},{"name":"pachygyria with mental retardation and seizures","type":"related"},{"name":"pachygyria with mental retardation, seizures, and arachnoid cysts","type":"related"},{"name":"pachygyria, intellectual disability and epilepsy","type":"related"},{"name":"pachygyria, mental retardation and epilepsy","type":"related"}],"termid":"MONDO:0010840","xrefs":{"Monarch":{"xref_id":"0010840"}}}


id: GO:0017041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-galactosyl-D-galactosyl-D-glucosyl-N-acylsphingosine + H2O = lactosyl-N-acylsphingosine + D-galactose.","definition_xrefs":["EC:3.2.1.47"],"gene_count":0,"genotype_count":0,"name":"obsolete galactosylgalactosylglucosylceramidase activity (obsolete GO:0017041)","synonyms":[{"name":"D-galactosyl-D-galactosyl-D-glucosyl-N-acylsphingosine galactohydrolase activity","type":"related"},{"name":"ceramide trihexosidase activity","type":"related"},{"name":"ceramidetrihexosidase activity","type":"related"},{"name":"ceramidetrihexoside alpha-galactosidase activity","type":"related"},{"name":"trihexosyl ceramide galactosidase activity","type":"related"},{"name":"trihexosylceramide alpha-galactosidase activity","type":"related"}],"termid":"GO:0017041"}


id: PBO:0003528
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localization dependent on F-actin","termid":"PBO:0003528"}


id: PBO:0052420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kirre like nephrin family adhesion molecule 2","termid":"PBO:0052420"}


id: PBO:0084937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mu3-like subunit of the clathrin associated protein complex (AP-3); functions in transport of alkaline phosphatase to the vacuole via the alternate pathway","termid":"PBO:0084937"}


id: PBO:0068575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 26, pseudogene","termid":"PBO:0068575"}


id: _global:never_in_taxon
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"never_in_taxon","secondary_identifiers":["RO:0002161"],"termid":"_global:never_in_taxon","xrefs":{"Monarch":{"xref_id":"never_in_taxon"}}}


id: GO:0048673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which outgrowths develop from the axons of intact undamaged neurons as a result of injury to an axon. The collateral sprouts typically appear from undamaged axons in a tissue which has had part of its nerve supply removed, and they can often innervate successfully any cells that have lost some or all of their original synaptic input.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon regeneration","termid":"GO:0031103"},{"relation_name":"is_a","term_name":"collateral sprouting","termid":"GO:0048668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collateral sprouting of intact axon in response to injury","termid":"GO:0048673"}


id: GO:0004821
data:
  {"annotated_genes":["SJAG_00103"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78958],"is_not":false,"summary":null,"term":"GO:0004821"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His).","definition_xrefs":["EC:6.1.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00103":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0140101","GO:0140098","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histidine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-380234","Reactome:R-HSA-379844","RHEA:17313","MetaCyc:HISTIDINE--TRNA-LIGASE-RXN"],"synonyms":[{"name":"L-histidine:tRNAHis ligase (AMP-forming)","type":"related"},{"name":"histidine translase activity","type":"related"},{"name":"histidyl-tRNA synthetase activity","type":"exact"},{"name":"histidyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004821","terms_by_termid":{"GO:0004821":null}}


id: GO:0021723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the medullary reticular formation over time, from its formation to the mature structure. The medullary reticular formation is a series of brain nuclei located in the medulla oblongata.","definition_xrefs":["GOC:jid","GOC:curators","GOC:dph","GO_REF:0000021","GOC:cls","Wikipedia:Rhombencephalon","GOC:dgh","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medullary reticular formation development","synonyms":[{"name":"rhombencephalic reticular formation development","type":"broad"}],"termid":"GO:0021723"}


id: GO:0110143
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bound organelle that envelops particles of magnetic iron minerals in magnetotactic bacteria. Magnetosomes form linear chains that align along the cellular motility axis at midcell and function in bacterial navigation along the Earth's magnetic field. They are formed by invagination of the cell inner membrane; in some species they remain connected to the inner membrane, in others they pinch off to form independent intracellular vesicles.","definition_xrefs":["GOC:aa","PMID:27620945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"magnetosome","termid":"GO:0110143"}


id: MONDO:0003820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ovarian teratoma which may be cystic, composed entirely of well differentiated, adult-type tissues, without evidence of fetal-type tissues.","definition_xrefs":["NCIT:C8112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature teratoma","termid":"MONDO:0003517"},{"relation_name":"is_a","term_name":"ovarian biphasic or triphasic teratoma","termid":"MONDO:0003821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature ovarian teratoma","secondary_identifiers":["UMLS:C1334637","ONCOTREE:OMT","MEDGEN:233672","DOID:6231"],"synonyms":[{"name":"mature ovarian teratoma","type":"exact"},{"name":"mature teratoma","type":"related"},{"name":"mature teratoma of ovary","type":"exact"},{"name":"mature teratoma of the ovary","type":"related"},{"name":"ovary mature teratoma","type":"exact"}],"termid":"MONDO:0003820","xrefs":{"Monarch":{"xref_id":"0003820"}}}


id: GO:0071821
data:
  {"annotated_genes":["SJAG_02294","SJAG_02465","SJAG_00935"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58960,100979,117833],"is_not":false,"summary":null,"term":"GO:0071821"}]},"cv_name":"cellular_component","definition":"A protein complex contains the proteins FANCM and MHF, or their orthologs, plays an essential role in DNA remodeling, protects replication forks, and is conserved in eukaryotes.","definition_xrefs":["PMID:20347428","GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00935":null,"SJAG_02294":null,"SJAG_02465":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"FANCM-MHF complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0071821","terms_by_termid":{"GO:0071821":null}}


id: SO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A snoRNA primary transcript that also encodes pre-miR sequence that is processed to form functionally active miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miR_encoding_snoRNA_primary_transcript","synonyms":[{"name":"miR encoding snoRNA primary transcript","type":"exact"}],"termid":"SO:0002034"}


id: GO:0031471
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle found in bacteria consisting of a proteinaceous coat containing enzymes for the degradation of ethanolamine whose purpose is the protection of the rest of the cell from the toxic acetaldehyde product of the enzyme ethanolamine ammonia lyase.","definition_xrefs":["PMID:11844753","GOC:js"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial microcompartment","termid":"GO:0031469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ethanolamine degradation polyhedral organelle","synonyms":[{"name":"ethanolamine metabolosome","type":"related"}],"termid":"GO:0031471"}


id: _global:has_ontology_root_term
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_ontology_root_term","secondary_identifiers":["IAO:0000700"],"termid":"_global:has_ontology_root_term"}


id: MONDO:0022809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Colver Steer Godman syndrome","termid":"MONDO:0022809","xrefs":{"Monarch":{"xref_id":"0022809"}}}


id: MONDO:0003425
data:
  {"annotated_genes":["SJAG_02050","SJAG_06022","SJAG_04183","SJAG_04665","SJAG_04816","SJAG_02658","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014062"},{"annotations":[86864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024528"},{"annotations":[85498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012238"},{"annotations":[85867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013117"},{"annotations":[86679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009783"},{"annotations":[85460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014656"},{"annotations":[86750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020845"},{"annotations":[86392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957993"}]},"cv_name":"mondo","definition":"Weakness or paralysis of at least one of the muscles controlling the movement of the eye. It results from degeneration of the muscles or the neural pathways involved in the eye movement. Representative disorders causing ophthalmoplegia include ocular myopathies and multiple sclerosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular motility disease","termid":"MONDO:0001584"},{"relation_name":"is_a","term_name":"palsy","termid":"MONDO:0006496"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02050":null,"SJAG_02658":null,"SJAG_04183":null,"SJAG_04665":null,"SJAG_04816":null,"SJAG_06022":null},"genotype_count":0,"is_obsolete":false,"name":"ophthalmoplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:45205","MESH:D009886","icd11.foundation:1848588735","ICD9:378.56","SCTID:78097002","UMLS:C0029089","DOID:539"],"synonyms":[{"name":"oculomotor paralysis","type":"related"},{"name":"total ophthalmoplegia","type":"exact"}],"termid":"MONDO:0003425","terms_by_termid":{"MONDO:0009783":null,"MONDO:0012238":null,"MONDO:0013117":null,"MONDO:0014062":null,"MONDO:0014656":null,"MONDO:0020845":null,"MONDO:0024528":null,"MONDO:0957993":null},"xrefs":{"Monarch":{"xref_id":"0003425"}}}


id: PBO:0062557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 4","termid":"PBO:0062557"}


id: PBO:0058285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4661","termid":"PBO:0058285"}


id: MONDO:0009494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Ketoadipicaciduria (obsolete MONDO:0009494)","termid":"MONDO:0009494","xrefs":{"Monarch":{"xref_id":"0009494"}}}


id: PBO:0085562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing SH3-domains; involved in establishing cell polarity and morphogenesis; functions as a scaffold protein for complexes that include Cdc24p, Ste5p, Ste20p, and Rsr1p","termid":"PBO:0085562"}


id: GO:0075220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of zoospore encystment on host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore encystment on host","termid":"GO:0075216"},{"relation_name":"is_a","term_name":"modulation of zoospore encystment on host","termid":"GO:0075219"},{"relation_name":"positively_regulates","term_name":"zoospore encystment on host","termid":"GO:0075218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of zoospore encystment on host","termid":"GO:0075220"}


id: MONDO:0004232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the breast parenchyma and is characterized by the presence of large malignant cells that exhibit keratinization.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratinizing squamous cell carcinoma","termid":"MONDO:0005056"},{"relation_name":"is_a","term_name":"squamous cell breast carcinoma","termid":"MONDO:0006056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"large cell keratinizing variant squamous cell breast carcinoma","secondary_identifiers":["DOID:7461","MEDGEN:274269","NCIT:C40357","UMLS:C1519486"],"synonyms":[{"name":"squamous cell breast carcinoma, large cell keratinizing variant","type":"exact"}],"termid":"MONDO:0004232","xrefs":{"Monarch":{"xref_id":"0004232"}}}


id: GO:0015190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-leucine from one side of a membrane to the other. L-leucine is 2-amino-4-methylpentanoic acid.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"branched-chain amino acid transmembrane transporter activity","termid":"GO:0015658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-leucine transmembrane transporter activity","synonyms":[{"name":"L-leucine transporter activity","type":"broad"},{"name":"leucine/isoleucine/valine porter activity","type":"narrow"},{"name":"leucine/valine/isoleucine permease activity","type":"narrow"}],"termid":"GO:0015190"}


id: PATO:0002281
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cuscpidate quality inhering in a bearer by virtue of the bearer possessing two cusps.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicuspidate","termid":"PATO:0002257"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biscupidate","synonyms":[{"name":"bicuspid","type":"exact"}],"termid":"PATO:0002281"}


id: PBO:0042063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 126","termid":"PBO:0042063"}


id: GO:1990905
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small, flexible, finger-like projection of cytoplasm containing an array of microtubles and located near the flagellar pores in some photosynthetic as well as nonphotosynthetic dinoflagellate species. Its functions are not fully understood, but it has been associated with feeding behavior (phagotrophy).","definition_xrefs":["GOC:at","PMID:1480107","Wikipedia:Dinoflagellate"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate peduncle","termid":"GO:1990905"}


id: MONDO:0019193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired generalized lipodystrophy belongs to a group of lipodystrophic syndromes characterized by loss of adipose tissue, and is a syndrome of insulin resistance that leads to increased cardiovascular risk. Acquired generalized lipodystrophy is related to a selective loss of subcutaneous adipose tissue occurring exclusively at the extremities (face, legs, arms, palms and sometimes soles).","definition_xrefs":["Orphanet:79086"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"acquired lipodystrophy","termid":"MONDO:0020089"},{"relation_name":"is_a","term_name":"generalized lipodystrophy","termid":"MONDO:0027766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"acquired generalized lipodystrophy","secondary_identifiers":["DOID:0080300","NANDO:1200860","NCIT:C131089","SCTID:86907008","MEDGEN:543499","GARD:12603","UMLS:C0271693"],"synonyms":[{"name":"Lawrence syndrome","type":"exact"},{"name":"Lawrence-Seip syndrome","type":"exact"},{"name":"acquired generalized lipodystrophy","type":"exact"},{"name":"acquired lipoatrophic diabetes","type":"exact"}],"termid":"MONDO:0019193","xrefs":{"Monarch":{"xref_id":"0019193"}}}


id: MONDO:0019449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly type 3-familial fetal akinesia sequence syndrome is characterized by the association of microencephaly, agenesis of the corpus callosum, brainstem hypoplasia, cystic cerebellum and fetal akinesia sequence. Less than 10 cases have been described so far. The syndrome is transmitted as an autosomal recessive trait and may be an allelic variant of Neu-Laxova syndrome and lissencephaly type III with metacarpal bone dysplasia.","definition_xrefs":["Orphanet:86821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly type 3","termid":"MONDO:0015148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly type 3-familial fetal akinesia sequence syndrome","secondary_identifiers":["GARD:19067","MEDGEN:930924","SCTID:718719001","UMLS:C4305255"],"termid":"MONDO:0019449","xrefs":{"Monarch":{"xref_id":"0019449"}}}


id: MONDO:1040052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by autosomal recessive variants in the PROM1 gene.","definition_xrefs":["PMID:10587575","PMID:38072963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"PROM1-related retinopathy","termid":"MONDO:1040056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"PROM1-related recessive retinopathy","synonyms":[{"name":"PROM1-related recessive retinopathy","type":"exact"}],"termid":"MONDO:1040052","xrefs":{"Monarch":{"xref_id":"1040052"}}}


id: GO:0060307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in the polarizing direction towards the resting potential in a ventricular cardiomyocyte.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell membrane repolarization","termid":"GO:0099623"},{"relation_name":"regulates","term_name":"ventricular cardiac muscle cell membrane repolarization","termid":"GO:0099625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ventricular cardiac muscle cell membrane repolarization","synonyms":[{"name":"electrocardiogram T wave","type":"related"},{"name":"regulation of ventricular cardiac muscle cell repolarization","type":"exact"},{"name":"regulation of ventricular cardiac muscle repolarization","type":"related"},{"name":"regulation of ventricular cardiomyocyte membrane repolarization","type":"exact"},{"name":"ventricular repolarization","type":"related"}],"termid":"GO:0060307"}


id: PBO:0078598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 11, Y-linked","termid":"PBO:0078598"}


id: MONDO:0018631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal dominant hair loss disorder characterized by the absence or scarcity of scalp hair, eyebrows, and eyelashes at birth; coarse and wiry hair during childhood; and progressive hair loss beginning around puberty.","definition_xrefs":["Orphanet:444"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"alopecia","termid":"MONDO:0004907"},{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marie Unna hereditary hypotrichosis","secondary_identifiers":["MEDGEN:419706","MESH:C535912","GARD:3390","UMLS:C2931059"],"synonyms":[{"name":"HR hypotrichosis","type":"exact"},{"name":"MUHH","type":"exact"},{"name":"Marie Unna congenital hypotrichosis","type":"exact"},{"name":"hypotrichosis caused by mutation in HR","type":"exact"},{"name":"hypotrichosis, Marie Unna type","type":"exact"}],"termid":"MONDO:0018631","xrefs":{"Monarch":{"xref_id":"0018631"}}}


id: MONDO:0001551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar disease","termid":"MONDO:0002187"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulceration of vulva","secondary_identifiers":["DOID:12566","ICD10CM:N76.6","MEDGEN:510247","ICD9:616.50","ICD9:616.51","SCTID:68640004","UMLS:C0156339"],"synonyms":[{"name":"ulceration of vulva","type":"exact"},{"name":"vulvar ulceration","type":"related"}],"termid":"MONDO:0001551","xrefs":{"Monarch":{"xref_id":"0001551"}}}


id: PBO:0066245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif single stranded interacting protein 2","termid":"PBO:0066245"}


id: PBO:0082857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factors for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); human homology TRAPPC1 complements yeast null mutant","termid":"PBO:0082857"}


id: MONDO:0010446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked cone dysfunction syndrome with myopia is characterized by moderate to high myopia associated with astigmatism and deuteranopia. Less than 10 families have been described so far. Transmission is X-linked recessive and the locus has been mapped to Xq28.","definition_xrefs":["Orphanet:90001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked cone dysfunction syndrome with myopia","secondary_identifiers":["SCTID:718718009","MEDGEN:463611","GARD:16782","OMIM:300843","UMLS:C3159311","MESH:C564092","icd11.foundation:290885874"],"synonyms":[{"name":"BORNHOLM eye disease","type":"related"},{"name":"Bornholm eye disease","type":"exact"},{"name":"Bornholm eye disease, X-linked recessive","type":"exact"},{"name":"bed","type":"related"},{"name":"myopia, high, with nonprogressive cone dysfunction","type":"related"}],"termid":"MONDO:0010446","xrefs":{"Monarch":{"xref_id":"0010446"}}}


id: GO:0035697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a CD8-positive, alpha-beta T cell from the blood vessels into the surrounding tissue.","definition_xrefs":["CL:0000625","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell extravasation","termid":"GO:0072683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, alpha-beta T cell extravasation","termid":"GO:0035697"}


id: PBO:0065524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patched 1","termid":"PBO:0065524"}


id: MONDO:0100048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing graft vs. host disease.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"graft-versus-host disease, susceptibility to","secondary_identifiers":["OMIM:614395","UMLS:C3280677","MEDGEN:482307"],"synonyms":[{"name":"GVHDS","type":"exact"}],"termid":"MONDO:0100048","xrefs":{"Monarch":{"xref_id":"0100048"}}}


id: SO:0001610
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An elongation of a polypeptide sequence at the C terminus deriving from a sequence variant extending the CDS.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"CDS_three_prime_extension","termid":"SO:0002229"},{"relation_name":"is_a","term_name":"elongated_polypeptide","termid":"SO:0001609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_polypeptide_C_terminal","synonyms":[{"name":"elongated polypeptide C terminal","type":"exact"}],"termid":"SO:0001610"}


id: GO:0061605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP [molybdopterin-synthase sulfur-carrier protein]-Gly-Gly = diphosphate [molybdopterin-synthase sulfur-carrier protein]-Gly-Gly-AMP.","definition_xrefs":["PMID:22370186","GOC:dph","EC:2.7.7.80","PMID:18154309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"molybdopterin-synthase adenylyltransferase activity","secondary_identifiers":["RHEA:43616"],"termid":"GO:0061605"}


id: GO:0046199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cresol, a mixture of the aromatic alcohol isoforms o-, p-, and m-cresol, which is obtained from coal tar or petroleum. The isomers are used as disinfectants, textile scouring agents, surfactants and as intermediates in the manufacture of salicylaldehyde, coumarin, and herbicides as well as being a major component of creosote.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"cresol metabolic process","termid":"GO:0042212"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cresol catabolic process","synonyms":[{"name":"cresol breakdown","type":"exact"},{"name":"cresol catabolism","type":"exact"},{"name":"cresol degradation","type":"exact"}],"termid":"GO:0046199"}


id: GO:1990124
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A ribonucleoprotein complex containing both protein and messenger RNA (mRNA) molecules.","definition_xrefs":["PMID:21915786","PMID:15574591","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete messenger ribonucleoprotein complex (obsolete GO:1990124)","synonyms":[{"name":"mRNA-protein complex","type":"exact"},{"name":"mRNP","type":"exact"},{"name":"mRNP complex","type":"exact"},{"name":"messenger ribonucleoprotein particle","type":"related"}],"termid":"GO:1990124"}


id: GO:0021875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands that contributes to the self renewal of neuroblasts in the forebrain.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dph","PMID:16226447","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"forebrain neuroblast division","termid":"GO:0021873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in forebrain neuroblast division","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway in forebrain neuroblast division","type":"exact"}],"termid":"GO:0021875"}


id: GO:0050427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3'-phosphoadenosine 5'-phosphosulfate, a naturally occurring mixed anhydride. It is an intermediate in the formation of a variety of sulfo compounds in biological systems.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate metabolic process","termid":"GO:0034035"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate metabolic process","secondary_identifiers":["Reactome:R-HSA-156584"],"synonyms":[{"name":"3'-phosphoadenosine 5'-phosphosulfate metabolism","type":"exact"},{"name":"3'-phosphoadenosine 5'-phosphosulphate metabolic process","type":"exact"},{"name":"3'-phosphoadenosine 5'-phosphosulphate metabolism","type":"exact"},{"name":"3'-phosphoadenylyl-sulfate metabolic process","type":"exact"},{"name":"3'-phosphoadenylyl-sulfate metabolism","type":"exact"},{"name":"PAPS metabolic process","type":"exact"},{"name":"PAPS metabolism","type":"exact"},{"name":"adenosine 3'-phosphate 5'-phosphosulfate metabolic process","type":"exact"},{"name":"adenosine 3'-phosphate 5'-phosphosulfate metabolism","type":"exact"},{"name":"phosphoadenosine phosphosulfate metabolic process","type":"exact"},{"name":"phosphoadenosine phosphosulfate metabolism","type":"exact"}],"termid":"GO:0050427"}


id: PBO:0056304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase 1","termid":"PBO:0056304"}


id: PBO:0084182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone chaperone for Htz1p/H2A-H2B dimer; required for the stabilization of the Chz1p-Htz1-H2B complex; has overlapping function with Nap1p; null mutant displays weak sensitivity to MMS and benomyl; contains a highly conserved CHZ motif; protein abundance increases in response to DNA replication stress","termid":"PBO:0084182"}


id: MONDO:1012504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hydrallantois, non-human animal","termid":"MONDO:1011672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrallantois, goat","secondary_identifiers":["OMIA:002053-9925"],"termid":"MONDO:1012504","xrefs":{"Monarch":{"xref_id":"1012504"}}}


id: PBO:0089697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, human NT5E family","termid":"PBO:0089697"}


id: PBO:0086571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YPR053C is not an essential gene; partially overlaps verified ORF NHP6A/YPR052C","termid":"PBO:0086571"}


id: PBO:0077456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 6","termid":"PBO:0077456"}


id: PBO:0002127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTA1-like protein","termid":"PBO:0002127"}


id: MONDO:0021530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the subglottis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subglottis neoplasm","termid":"MONDO:0000933"},{"relation_name":"is_a","term_name":"benign laryngeal neoplasm","termid":"MONDO:0002354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of subglottis","secondary_identifiers":["MEDGEN:83388","UMLS:C0345749","SCTID:92412003","NCIT:C4427"],"synonyms":[{"name":"benign neoplasm of the subglottis","type":"exact"},{"name":"benign subglottic neoplasm","type":"exact"},{"name":"benign subglottic tumor","type":"exact"},{"name":"benign subglottic tumour","type":"exact"},{"name":"benign subglottis neoplasm","type":"exact"},{"name":"benign subglottis tumor","type":"exact"},{"name":"benign subglottis tumour","type":"exact"},{"name":"benign tumor of subglottis","type":"exact"},{"name":"benign tumor of the subglottis","type":"exact"},{"name":"benign tumour of subglottis","type":"exact"},{"name":"benign tumour of the subglottis","type":"exact"},{"name":"subglottis benign neoplasm","type":"exact"}],"termid":"MONDO:0021530","xrefs":{"Monarch":{"xref_id":"0021530"}}}


id: GO:0031086
data:
  {"annotated_genes":["SJAG_04640","SJAG_02370","SJAG_03023"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79297,76308],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031087"},{"annotations":[92000],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"A pathway of degradation of nuclear-transcribed mRNAs that proceeds through a series of steps that is independent of deadenylation, but requires decapping followed by transcript decay, and that can regulate mRNA stability.","definition_xrefs":["GOC:krc","PMID:15225544","PMID:15225542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03023":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, deadenylation-independent decay","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"deadenylation-independent mRNA decay","type":"exact"},{"name":"deadenylylation-independent mRNA decay","type":"exact"},{"name":"mRNA breakdown, deadenylation-independent decay","type":"exact"},{"name":"mRNA catabolic process, deadenylation-independent","type":"exact"},{"name":"mRNA catabolic process, deadenylylation-independent","type":"exact"},{"name":"mRNA catabolism, deadenylation-independent","type":"exact"},{"name":"mRNA catabolism, deadenylation-independent decay","type":"exact"},{"name":"mRNA catabolism, deadenylylation-independent","type":"exact"},{"name":"mRNA degradation, deadenylation-independent decay","type":"exact"},{"name":"nuclear mRNA catabolic process, deadenylation-independent decay","type":"exact"}],"termid":"GO:0031086","terms_by_termid":{"GO:0031087":null,"GO:0036450":null}}


id: PBO:0038499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 8","termid":"PBO:0038499"}


id: GO:0019434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sophorosyloxydocosanoate, 13-sophorosyloxydocosanoate 6',6''-diacetate, an aromatic hydrocarbon.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sophorosyloxydocosanoate metabolic process","synonyms":[{"name":"sophorosyloxydocosanoate metabolism","type":"exact"}],"termid":"GO:0019434"}


id: MONDO:1012476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"attention deficit hyperactivity disorder, non-human animal","termid":"MONDO:1011638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attention deficit hyperactivity disorder, dog","secondary_identifiers":["OMIA:001882-9615"],"termid":"MONDO:1012476","xrefs":{"Monarch":{"xref_id":"1012476"}}}


id: PBO:0077487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 207","termid":"PBO:0077487"}


id: PBO:0046414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A1","termid":"PBO:0046414"}


id: PBO:0040094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosyltransferase 1","termid":"PBO:0040094"}


id: PBO:0031611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_vacuolar_transport","termid":"PBO:0031611"}


id: MONDO:0859290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypoalphalipoproteinemia","termid":"MONDO:0017773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"familial apolipoprotein gene cluster deletion syndrome","secondary_identifiers":["OMIM:620058","UMLS:C5774318","MEDGEN:1824091"],"termid":"MONDO:0859290","xrefs":{"Monarch":{"xref_id":"0859290"}}}


id: MONDO:0007998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microspherophakia - metaphyseal dysplasia is a very rare syndrome associating bone dysplasia with micromelic dwarfism and eye defects.","definition_xrefs":["Orphanet:2551"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete lens size anomaly (obsolete MONDO:0020235)","termid":"MONDO:0020235"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microspherophakia-metaphyseal dysplasia syndrome","secondary_identifiers":["UMLS:C1834880","GARD:5481","OMIM:157151","MESH:C536540","MEDGEN:322520"],"synonyms":[{"name":"Verloes Van Maldergem Marneffe syndrome","type":"related"},{"name":"Verloes-Van Maldergem-de Marneffe syndrome","type":"exact"},{"name":"dominantly inherited bone dysplasia with severe eye involvement","type":"related"},{"name":"microspherophakia-metaphyseal dysplasia","type":"related"}],"termid":"MONDO:0007998","xrefs":{"Monarch":{"xref_id":"0007998"}}}


id: PBO:0090131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit c' (proteolipid subunit)","termid":"PBO:0090131"}


id: GO:1902839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nuclear migration along microtubule.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23087209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of nuclear migration along microtubule","termid":"GO:1902838"},{"relation_name":"negatively_regulates","term_name":"nuclear migration along microtubule","termid":"GO:0030473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of nuclear migration along microtubule","synonyms":[{"name":"down regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"down regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"down regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"down regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"down regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"down regulation of nuclear migration along microtubule","type":"exact"},{"name":"down regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"down regulation of transport of nucleus by microtubules","type":"exact"},{"name":"down regulation of transport of nucleus, microtubule-mediated","type":"exact"},{"name":"down-regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"down-regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"down-regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"down-regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"down-regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"down-regulation of nuclear migration along microtubule","type":"exact"},{"name":"down-regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"down-regulation of transport of nucleus by microtubules","type":"exact"},{"name":"down-regulation of transport of nucleus, microtubule-mediated","type":"exact"},{"name":"downregulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"downregulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"downregulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"downregulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"downregulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"downregulation of nuclear migration along microtubule","type":"exact"},{"name":"downregulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"downregulation of transport of nucleus by microtubules","type":"exact"},{"name":"downregulation of transport of nucleus, microtubule-mediated","type":"exact"},{"name":"inhibition of microtubule cytoskeleton-dependent nuclear positioning","type":"narrow"},{"name":"inhibition of microtubule cytoskeleton-dependent nucleus positioning","type":"narrow"},{"name":"inhibition of microtubule-dependent nuclear positioning","type":"narrow"},{"name":"inhibition of microtubule-dependent nucleus positioning","type":"narrow"},{"name":"inhibition of microtubule-mediated nuclear migration","type":"narrow"},{"name":"inhibition of nuclear migration along microtubule","type":"narrow"},{"name":"inhibition of nuclear migration, microtubule-mediated","type":"narrow"},{"name":"inhibition of transport of nucleus by microtubules","type":"narrow"},{"name":"inhibition of transport of nucleus, microtubule-mediated","type":"narrow"},{"name":"negative regulation of microtubule cytoskeleton-dependent nuclear positioning","type":"exact"},{"name":"negative regulation of microtubule cytoskeleton-dependent nucleus positioning","type":"exact"},{"name":"negative regulation of microtubule-dependent nuclear positioning","type":"exact"},{"name":"negative regulation of microtubule-dependent nucleus positioning","type":"exact"},{"name":"negative regulation of microtubule-mediated nuclear migration","type":"exact"},{"name":"negative regulation of nuclear migration, microtubule-mediated","type":"exact"},{"name":"negative regulation of transport of nucleus by microtubules","type":"exact"},{"name":"negative regulation of transport of nucleus, microtubule-mediated","type":"exact"}],"termid":"GO:1902839"}


id: PBO:0083331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF YER137C","termid":"PBO:0083331"}


id: MONDO:0000884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myeloid and lymphoid neoplasms associated with FGFR1 abnormalities (obsolete MONDO:0000884)","termid":"MONDO:0000884","xrefs":{"Monarch":{"xref_id":"0000884"}}}


id: PBO:0073466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sideroflexin 2","termid":"PBO:0073466"}


id: GO:0031265
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed upon binding of Fas/CD95/APO-1 to its ligand. The complex includes FADD/Mort1, procaspase-8/10 and c-FLIP in addition to the ligand-bound receptor.","definition_xrefs":["PMID:12628743","PMID:12655293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death-inducing signaling complex","termid":"GO:0031264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"CD95 death-inducing signaling complex","synonyms":[{"name":"CD95 DISC","type":"exact"},{"name":"CD95 death-inducing signalling complex","type":"exact"},{"name":"Fas death-inducing signaling complex","type":"exact"}],"termid":"GO:0031265"}


id: GO:0045460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sterigmatocystin, a carcinogenic mycotoxin produced in high yields by strains of the common molds.","definition_xrefs":["PMID:10618248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"sterigmatocystin metabolic process","synonyms":[{"name":"sterigmatocystin metabolism","type":"exact"}],"termid":"GO:0045460"}


id: PBO:0005370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing coactivator SRRM1 (predicted)","termid":"PBO:0005370"}


id: GO:0106159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent small RNA loading onto RISC.","definition_xrefs":["GOC:ha","PMID:29775584"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of small RNA loading onto RISC (obsolete GO:0106159)","termid":"GO:0106159"}


id: GO:0044052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released via symbiont membrane budding, the evagination of a membrane resulting in formation of a vesicle.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance released by membrane budding (obsolete GO:0044052)","synonyms":[{"name":"interaction with host via substance released by symbiont membrane budding","type":"exact"}],"termid":"GO:0044052"}


id: PBO:0027330
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rRNA_transcription","termid":"PBO:0027330"}


id: MOD:00624
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 113.0-113.1 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.1 Da","termid":"MOD:00616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 113.0-113.1 Da","termid":"MOD:00624"}


id: GO:0043842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (KDO)-lipid IVA + CMP-3-deoxy-D-manno-octulosonate = KDO2-lipid IVA + CMP, and lipid IVA + CMP-3-deoxy-D-manno-octulosonate = (KDO)-lipid IVA + CMP.","definition_xrefs":["PMID:9195966","PMID:2033061","PMID:1577828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"Kdo transferase activity","synonyms":[{"name":"3-deoxy-D-manno-octulosonic-acid transferase activity","type":"exact"},{"name":"WaaA","type":"related"},{"name":"kdtA","type":"related"}],"termid":"GO:0043842"}


id: SO:0000025
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An internal RNA loop where the extent of the loop on both stands is the same size.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_internal_loop","termid":"SO:0000020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symmetric_RNA_internal_loop","synonyms":[{"name":"A-minor RNA motif","type":"exact"}],"termid":"SO:0000025"}


id: MOD:01785
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(L-isoglutamyl)-L-threonine, using free L-glutamine and releasing ammonia.","definition_xrefs":["RESID:AA0536#THR","PubMed:8706862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"O-(L-isoglutamyl)-L-threonine","termid":"MOD:01979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoglutamyl)-L-threonine (active site intermediate)","synonyms":[{"name":"(2S)-2-amino-5-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-5-oxopentanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-4-amino-4-carboxybutanoyl]oxy)-propanoic acid","type":"exact"},{"name":"5-(threon-O3-yl)glutamate","type":"exact"},{"name":"O(beta)-(gamma-glutamyl)threonine","type":"exact"},{"name":"O-(L-isoglutamyl)-L-threonine","type":"exact"},{"name":"O3-(isoglutamyl)threonine","type":"exact"}],"termid":"MOD:01785"}


id: GO:0099075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vesicle-mediated transport of cargo from the mitochondrion by a mitochondrion-derived vesicle.","definition_xrefs":["GOC:bc","GOC:pad","GOC:PARL-UCL","PMID:20619655","PMID:37131163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitochondrion-derived vesicle mediated transport","termid":"GO:0099075"}


id: PBO:0046655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"establishment of sister chromatid cohesion N-acetyltransferase 2","termid":"PBO:0046655"}


id: MONDO:0022461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by bilateral anophthalmos, hypospadias, bifid scrotum, micrognathia, and cleft palate with normal chromosomes.","definition_xrefs":["PMID:7891380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anophthalmia cleft palate micrognathia","termid":"MONDO:0022461","xrefs":{"Monarch":{"xref_id":"0022461"}}}


id: GO:0050403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-zeatin + UDP-D-glucose = O-beta-D-glucosyl-trans-zeatin + H+ + UDP.","definition_xrefs":["EC:2.4.1.203","RHEA:23224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"trans-zeatin O-beta-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4723","KEGG_REACTION:R02118"],"synonyms":[{"name":"UDP-glucose:trans-zeatin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:trans-zeatin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-zeatin O-glucosyltransferase activity","type":"related"},{"name":"zeatin O-b-D-glucosyltransferase activity","type":"exact"},{"name":"zeatin O-beta-D-glucosyltransferase activity","type":"related"},{"name":"zeatin O-glucosyltransferase activity","type":"related"}],"termid":"GO:0050403"}


id: GO:0075305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which the symbiont regulates the increase in its size or mass, or its progression from an initial condition to a later condition, on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of growth or development of symbiont on or near host (obsolete GO:0075305)","synonyms":[{"name":"modulation of growth or development of symbiont on or near host","type":"exact"},{"name":"modulation of growth or development of symbiont on or near host surface","type":"exact"}],"termid":"GO:0075305"}


id: GO:0044249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular biosynthetic process (obsolete GO:0044249)","synonyms":[{"name":"cellular anabolism","type":"exact"},{"name":"cellular biosynthesis","type":"exact"},{"name":"cellular formation","type":"exact"},{"name":"cellular synthesis","type":"exact"}],"termid":"GO:0044249"}


id: FYPO:0004257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one nucleus and has a larger volume than normal.","definition_xrefs":["PMID:10503548","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"has_part","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"swollen multinucleate vegetative cell","synonyms":[{"name":"enlarged multinucleate cell","type":"related"},{"name":"large multinucleate cell","type":"related"},{"name":"multinucleate cell with increased cell size","type":"related"},{"name":"multinucleate cell with increased cell volume","type":"exact"},{"name":"swollen multinucleate cell during vegetative growth","type":"exact"},{"name":"swollen multinucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004257"}


id: PBO:0051330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-24","termid":"PBO:0051330"}


id: GO:0009398
data:
  {"annotated_genes":["SJAG_04845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73054],"is_not":false,"summary":null,"term":"GO:0009398"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of FMN, the oxidized form of flavin mononucleotide (riboflavin 5'-(dihydrogen phosphate)), which acts as a coenzyme for a number of oxidative enzymes including NADH dehydrogenase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside monophosphate biosynthetic process","termid":"GO:0009156"},{"relation_name":"is_a","term_name":"ribonucleotide biosynthetic process","termid":"GO:0009260"},{"relation_name":"is_a","term_name":"flavin-containing compound biosynthetic process","termid":"GO:0042727"},{"relation_name":"is_a","term_name":"FMN metabolic process","termid":"GO:0046444"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"FMN biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"FMN anabolism","type":"exact"},{"name":"FMN biosynthesis","type":"exact"},{"name":"FMN formation","type":"exact"},{"name":"FMN synthesis","type":"exact"}],"termid":"GO:0009398","terms_by_termid":{"GO:0009398":null}}


id: PBO:0088515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S7","termid":"PBO:0088515"}


id: PBO:0065475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMD12 pseudogene 1","termid":"PBO:0065475"}


id: MONDO:0011792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial thyroid dyshormonogenesis in which the cause of the disease is a mutation in the DUOX2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial thyroid dyshormonogenesis","termid":"MONDO:0010132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"thyroid dyshormonogenesis 6","secondary_identifiers":["MESH:C564608","OMIM:607200","UMLS:C1846632","DOID:0112189","GARD:18193","MEDGEN:375935"],"synonyms":[{"name":"DUOX2 familial thyroid dyshormonogenesis","type":"exact"},{"name":"TDH6","type":"related"},{"name":"familial thyroid dyshormonogenesis caused by mutation in DUOX2","type":"exact"},{"name":"hypothyroidism, congenital, due to dyshormonogenesis, 6","type":"related"},{"name":"thyroid dyshormonogenesis 6","type":"exact"},{"name":"thyroid dyshormonogenesis type 6","type":"exact"},{"name":"thyroid hormonogenesis, genetic defect in, 6","type":"related"}],"termid":"MONDO:0011792","xrefs":{"Monarch":{"xref_id":"0011792"}}}


id: PBO:0069869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1156, pseudogene","termid":"PBO:0069869"}


id: PBO:0049273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase kinase 3 beta","termid":"PBO:0049273"}


id: MONDO:0006071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm characterized by the presence of connective tissue stroma and epithelial structures. It occurs in the ovary, fallopian tube, uterine corpus, and cervix. Cases of adenofibroma of the ovary with low grade malignant potential have also been reported.","definition_xrefs":["NCIT:C8984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign female reproductive system neoplasm","termid":"MONDO:0000624"},{"relation_name":"is_a","term_name":"fibroma","termid":"MONDO:0005167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenofibroma","secondary_identifiers":["ICDO:9013/0","MEDGEN:1325","MESH:D000232","UMLS:C0001422","EFO:1000070","DOID:2683"],"synonyms":[{"name":"adenofibroma, benign","type":"exact"},{"name":"adenofibroma, no ICD-O subtype","type":"exact"},{"name":"adenofibroma, no ICD-O subtype (morphologic abnormality)","type":"exact"},{"name":"benign mixed Muellerian tumor","type":"exact"},{"name":"benign mixed Muellerian tumour","type":"exact"},{"name":"female reproductive system adenofibroma","type":"exact"}],"termid":"MONDO:0006071","xrefs":{"Monarch":{"xref_id":"0006071"}}}


id: PBO:0070825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 3","termid":"PBO:0070825"}


id: PBO:0054310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1702","termid":"PBO:0054310"}


id: GO:0072252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a metanephric juxtaglomerulus cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerulus cell development","termid":"GO:0072142"},{"relation_name":"part_of","term_name":"metanephric juxtaglomerulus cell differentiation","termid":"GO:0072251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric juxtaglomerulus cell development","termid":"GO:0072252"}


id: GO:0050795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of behavior, the internally coordinated responses (actions or inactions) of whole living organisms (individuals or groups) to internal or external stimuli.","definition_xrefs":["GOC:pr","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of behavior","synonyms":[{"name":"regulation of behaviour","type":"exact"}],"termid":"GO:0050795"}


id: PBO:0057413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548o","termid":"PBO:0057413"}


id: PBO:0031103
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_osmotic_stress","termid":"PBO:0031103"}


id: PBO:0039076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase 4","termid":"PBO:0039076"}


id: GO:0048497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of a floral organ is maintained. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["PO:0025395","GOC:PO_curators","GOC:tair_curators","PMID:9090883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of plant organ identity","termid":"GO:0090700"},{"relation_name":"part_of","term_name":"floral organ development","termid":"GO:0048437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of floral organ identity","termid":"GO:0048497"}


id: GO:0080140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving jasmonic acid.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"regulates","term_name":"jasmonic acid metabolic process","termid":"GO:0009694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of jasmonic acid metabolic process","termid":"GO:0080140"}


id: MONDO:0032798
data:
  {"annotated_genes":["SJAG_02885","SJAG_01356"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87295,87296],"is_not":false,"summary":null,"term":"MONDO:0032798"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"is_obsolete":false,"name":"ichthyotic keratoderma, spasticity, hypomyelination, and dysmorphic facial features","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618527","MEDGEN:1682428","UMLS:C5193147"],"synonyms":[{"name":"ICHTHYOTIC KERATODERMA, SPASTICITY, HYPOMYELINATION, AND DYSMORPHIC FACIAL FEATURES","type":"related"},{"name":"IKSHD","type":"related"},{"name":"ichthyotic keratoderma, spasticity, hypomyelination, and dysmorphic facies","type":"exact"}],"termid":"MONDO:0032798","terms_by_termid":{"MONDO:0032798":null},"xrefs":{"Monarch":{"xref_id":"0032798"}}}


id: GO:0015340
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (Zn2+ or Cd2+)(out) = (Zn2+ or Cd2+)(in). The activity is driven by proton motive force, possibly by proton symport.","definition_xrefs":["TC:2.A.4.2.2"],"gene_count":0,"genotype_count":0,"name":"obsolete zinc, cadmium uptake permease activity (obsolete GO:0015340)","synonyms":[{"name":"zinc, cadmium uptake permease activity","type":"exact"}],"termid":"GO:0015340"}


id: GO:0016502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a nucleotide and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. A nucleotide is a compound that consists of a nucleoside esterified with a phosphate molecule.","definition_xrefs":["ISBN:0198506732","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"nucleotide receptor activity","termid":"GO:0016502"}


id: MONDO:0007948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Marfan syndrome","termid":"MONDO:0007947"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marfanoid hypermobility syndrome","secondary_identifiers":["MEDGEN:120632","OMIM:154750","MESH:C531742","UMLS:C0268365"],"synonyms":[{"name":"marfanoid hypermobility syndrome","type":"exact"}],"termid":"MONDO:0007948","xrefs":{"Monarch":{"xref_id":"0007948"}}}


id: GO:0018948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving xylene, a mixture of three colorless, aromatic hydrocarbon liquids, ortho-, meta- and para-xylene.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylene metabolic process","synonyms":[{"name":"xylene metabolism","type":"exact"}],"termid":"GO:0018948"}


id: PBO:0055981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat neuronal 4","termid":"PBO:0055981"}


id: GO:0000147
data:
  {"annotated_genes":["SJAG_04001","SJAG_03146","SJAG_02075","SJAG_01964","SJAG_00649","SJAG_02228","SJAG_03044","SJAG_02511","SJAG_00521","SJAG_02245","SJAG_03119","SJAG_01384","SJAG_01732","SJAG_03086","SJAG_04465","SJAG_04886","SJAG_04052","SJAG_04100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73659,73865,75593,77629,79717,88469,90997,95134,98246,100017,100199,103406,103597,103653,105518,111061,112544,112568],"is_not":false,"summary":null,"term":"GO:0000147"}]},"cv_name":"biological_process","definition":"Assembly of an actin cortical patch, a discrete actin-containing structure found at the plasma membrane of fungal cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"cortical actin cytoskeleton organization","termid":"GO:0030866"},{"relation_name":"is_a","term_name":"actin cortical patch organization","termid":"GO:0044396"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00521":null,"SJAG_00649":null,"SJAG_01384":null,"SJAG_01732":null,"SJAG_01964":null,"SJAG_02075":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_02511":null,"SJAG_03044":null,"SJAG_03086":null,"SJAG_03119":null,"SJAG_03146":null,"SJAG_04001":null,"SJAG_04052":null,"SJAG_04100":null,"SJAG_04465":null,"SJAG_04886":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"actin cortical patch assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000147","terms_by_termid":{"GO:0000147":null}}


id: PBO:0057354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548a-2","termid":"PBO:0057354"}


id: GO:1905094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apolipoprotein A-I-mediated signaling pathway.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA","GOC:bc","GOC:TermGenie","PMID:25084135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"apolipoprotein A-I-mediated signaling pathway","termid":"GO:0038027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of apolipoprotein A-I-mediated signaling pathway","synonyms":[{"name":"regulation of apolipoprotein A-I-mediated signalling pathway","type":"exact"}],"termid":"GO:1905094"}


id: MONDO:0010511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital bilateral absence of vas deferens","termid":"MONDO:0018801"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vas deferens, congenital bilateral aplasia of, X-linked","secondary_identifiers":["GARD:15279","DOID:0111863","MEDGEN:934782","OMIM:300985","UMLS:C4310815"],"synonyms":[{"name":"CBAVDX","type":"exact"},{"name":"congenital bilateral absence of vas deferens, X-linked","type":"exact"},{"name":"vas deferens, congenital bilateral aplasia of, X-linked","type":"exact"},{"name":"vas deferens, congenital bilateral aplasia of, X-linked; CBAVDX","type":"exact"}],"termid":"MONDO:0010511","xrefs":{"Monarch":{"xref_id":"0010511"}}}


id: PBO:0027781
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_dephosphorylation","termid":"PBO:0027781"}


id: FYPO:0004384
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of single-stranded DNA binding by a gene product is normal (i.e. indistinguishable from wild type). The relevant gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA binding","termid":"FYPO:0000655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal single-stranded DNA binding","synonyms":[{"name":"normal ssDNA binding","type":"exact"}],"termid":"FYPO:0004384"}


id: MONDO:0007567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Epstein-Barr virus insertion site 1 (obsolete MONDO:0007567)","secondary_identifiers":["OMIM:132850"],"synonyms":[{"name":"EBVS1","type":"related"},{"name":"Epstein-Barr VIRUS insertion site 1","type":"related"},{"name":"Epstein-Barr Virus insertion site type 1","type":"exact"},{"name":"Epstein-Barr Virus integration site","type":"related"},{"name":"Epstein-Barr virus insertion site 1","type":"exact"}],"termid":"MONDO:0007567","xrefs":{"Monarch":{"xref_id":"0007567"}}}


id: FYPO:0007440
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the directed movement of sterols within cells is abnormal.","definition_xrefs":["GO:0032366","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal intracellular sterol transport","synonyms":[{"name":"abnormal intracellular sterol transport during mitotic cell cycle","type":"related"},{"name":"abnormal intracellular sterol transport during vegetative growth","type":"exact"}],"termid":"FYPO:0007440"}


id: PBO:0059473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL complex subunit 3","termid":"PBO:0059473"}


id: PBO:0053347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 235","termid":"PBO:0053347"}


id: GO:0002167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ternary complex consisting of VRK3, VHR (Dusp3), and ERK1 (Mapk3) existing in neuronal cells, and is involved in regulation of the ERK signaling pathway.","definition_xrefs":["GOC:hjd","PMID:16845380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"VRK3/VHR/ERK complex","termid":"GO:0002167"}


id: GO:0044510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of signal transduction in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj"],"gene_count":0,"genotype_count":0,"name":"obsolete venom-mediated activation of signal transduction in another organism (obsolete GO:0044510)","synonyms":[{"name":"envenomation resulting in positive regulation of signal transduction in another organism","type":"exact"},{"name":"envenomation resulting in positive regulation of signal transduction in other organism","type":"exact"}],"termid":"GO:0044510"}


id: PBO:0042284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD1d molecule","termid":"PBO:0042284"}


id: PBO:0030337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_organization_during_nitrogen_starvation","termid":"PBO:0030337"}


id: PBO:0064012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 46","termid":"PBO:0064012"}


id: PBO:0051765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 8 pseudogene 1","termid":"PBO:0051765"}


id: MONDO:0017266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratinopathic ichthyosis","secondary_identifiers":["Orphanet:281103","GARD:21107","UMLS:C4511307","NANDO:1200610","NANDO:2200987","SCTID:724837004","icd11.foundation:992865924","MEDGEN:1393111"],"synonyms":[{"name":"KPI","type":"exact"}],"termid":"MONDO:0017266","xrefs":{"Monarch":{"xref_id":"0017266"}}}


id: MONDO:0021096
data:
  {"annotated_genes":["SJAG_01144"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01144":null},"genotype_count":0,"is_obsolete":false,"name":"papillary epithelial neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1335324","MEDGEN:235456","NCIT:C8429"],"synonyms":[{"name":"papillary epithelial neoplasm","type":"exact"}],"termid":"MONDO:0021096","terms_by_termid":{"MONDO:0003789":null},"xrefs":{"Monarch":{"xref_id":"0021096"}}}


id: MONDO:0024888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial neoplasm of the female reproductive system arising from mesonephric remnants.","definition_xrefs":["NCIT:C4295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"mesonephric neoplasm","secondary_identifiers":["MEDGEN:137779","UMLS:C0334531","ICDO:9110/1"],"synonyms":[{"name":"Wolffian duct neoplasm","type":"exact"},{"name":"Wolffian duct tumor","type":"exact"},{"name":"Wolffian duct tumour","type":"exact"},{"name":"mesonephric duct neoplasm","type":"exact"},{"name":"mesonephric duct tumor","type":"exact"},{"name":"mesonephric duct tumour","type":"exact"},{"name":"mesonephric neoplasm","type":"exact"},{"name":"mesonephric tumor","type":"exact"},{"name":"mesonephric tumour","type":"exact"},{"name":"mesonephroma","type":"exact"},{"name":"neoplasm of mesonephric duct","type":"exact"},{"name":"tumor of mesonephric duct","type":"exact"},{"name":"tumour of mesonephric duct","type":"exact"}],"termid":"MONDO:0024888","xrefs":{"Monarch":{"xref_id":"0024888"}}}


id: GO:0030652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of peptides with antibiotic activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic catabolic process","termid":"GO:0017001"},{"relation_name":"is_a","term_name":"peptide antibiotic metabolic process","termid":"GO:0030650"},{"relation_name":"is_a","term_name":"peptide catabolic process","termid":"GO:0043171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide antibiotic catabolic process","synonyms":[{"name":"peptide antibiotic breakdown","type":"exact"},{"name":"peptide antibiotic catabolism","type":"exact"},{"name":"peptide antibiotic degradation","type":"exact"}],"termid":"GO:0030652"}


id: PBO:0113508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Twin Cx(9)C protein involved in cytochrome c oxidase organization; organization includes assembly or stability; localizes to the mitochondrial intermembrane space via the Mia40p-Erv1p system; interacts genetically with CYC1 and with cytochrome c oxidase assembly factors; mutation can be complemented by human COA4","termid":"PBO:0113508"}


id: PBO:0091808
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by C. albicans CAS5","termid":"PBO:0091808"}


id: FYPO:0002227
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119545],"is_not":false,"summary":null,"term":"FYPO:0002227"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more triglycerides measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00426":null},"genotype_count":1,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular triglyceride level during vegetative growth","references_by_uniquename":{"PMID:25318672":null},"single_locus_annotated_genes":["SJAG_00426"],"single_locus_genotype_uniquenames":["bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased cellular TAG level during vegetative growth","type":"exact"},{"name":"increased cellular triacylglycerol level during vegetative growth","type":"exact"},{"name":"increased cellular triglyceride level during mitotic cell cycle","type":"related"},{"name":"increased triglyceride accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0002227","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000006":null,"FYECO:0000162":null,"FYPO:0002227":null}}


id: MONDO:0001007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of meningitis (disease).","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"infectious meningitis","termid":"MONDO:0004796"},{"relation_name":"is_a","term_name":"meningitis","termid":"MONDO:0021108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic meningitis","secondary_identifiers":["MEDGEN:509621","DOID:10341","icd11.foundation:1597945150","SCTID:21664006","UMLS:C0154653","ICD10CM:G03.1","ICD9:322.2"],"synonyms":[{"name":"chronic meningitis (disease)","type":"exact"},{"name":"meningitis (disease), chronic","type":"exact"}],"termid":"MONDO:0001007","xrefs":{"Monarch":{"xref_id":"0001007"}}}


id: PBO:0076553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tax1 binding protein 1","termid":"PBO:0076553"}


id: PBO:0041210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper and W2 domains 1 pseudogene 2","termid":"PBO:0041210"}


id: PBO:0062133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily E member 2","termid":"PBO:0062133"}


id: GO:0071500
data:
  {"annotated_genes":["SJAG_04063"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102558],"is_not":false,"summary":null,"term":"GO:0071500"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrosative stress stimulus. Nitrosative stress is a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrosative stress","termid":"GO:0051409"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitrosative stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071500","terms_by_termid":{"GO:0071500":null}}


id: MONDO:0015328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of bone development disease that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare bone development disorder (obsolete MONDO:0015328)","secondary_identifiers":["NCIT:C34432","Orphanet:139012"],"synonyms":[{"name":"bone development disorder","type":"exact"},{"name":"rare bone development disease","type":"exact"},{"name":"rare skeletal development disorder","type":"exact"}],"termid":"MONDO:0015328","xrefs":{"Monarch":{"xref_id":"0015328"}}}


id: PBO:0084165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly-conserved N-terminally anchored AAA-ATPase; distributed in the mitochondrial outer membrane and peroxisomes; involved in mitochondrial protein sorting; functions as an extraction engine in local organelle surveillance to remove and initiate degradation of mistargeted proteins, ensuring fidelity of organelle-specific localization of tail-anchored proteins; contains an N-terminal transmembrane domain and C-terminal cytoplasmic ATPase domain","termid":"PBO:0084165"}


id: GO:0047746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chlorophyll + H2O = phytol + chlorophyllide.","definition_xrefs":["RHEA:19605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"chlorophyllase activity","secondary_identifiers":["EC:3.1.1.14","MetaCyc:CHLOROPHYLLASE-RXN"],"synonyms":[{"name":"chlorophyll chlorophyllidohydrolase activity","type":"related"}],"termid":"GO:0047746"}


id: PBO:0081398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF236 divergent transcript","termid":"PBO:0081398"}


id: PBO:0003709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA transporter (predicted)","termid":"PBO:0003709"}


id: GO:0102076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-carotene + O2 = 10'-apo-beta-carotenal + beta-ionone.","definition_xrefs":["EC:1.13.11.71","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"beta,beta-carotene-9',10'-cleaving oxygenase activity","secondary_identifiers":["MetaCyc:RXN-10741","RHEA:26389"],"termid":"GO:0102076"}


id: PBO:0046387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eomesodermin","termid":"PBO:0046387"}


id: MONDO:0006279
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A rare, aggressive, poorly differentiated, non-small cell lung carcinoma characterized by the presence of a sarcomatoid component often associated with giant cell differentiation. There is a male to female ratio of 4:1. Clinical symptoms include cough, hemoptysis, chest pain, progressive dyspnea and fever secondary to recurrent pneumonia. Cigarette smoking is a major risk factor.","definition_xrefs":["NCIT:C45540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung large cell carcinoma","termid":"MONDO:0003050"},{"relation_name":"is_a","term_name":"sarcomatoid carcinoma","termid":"MONDO:0006406"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung sarcomatoid carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:707460002","DOID:0080777","UMLS:C1708781","ICD9:162.9","MEDGEN:353871","ONCOTREE:SARCL","EFO:1000336"],"synonyms":[{"name":"lung sarcomatoid carcinoma","type":"exact"},{"name":"sarcomatoid carcinoma of the lung","type":"related"}],"termid":"MONDO:0006279","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0006279"}}}


id: PBO:0075756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine racemase","termid":"PBO:0075756"}


id: GO:0034067
data:
  {"annotated_genes":["SJAG_01516"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99051],"is_not":false,"summary":null,"term":"GO:0034067"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the Golgi apparatus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to Golgi apparatus","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000042","GO:0072600"],"synonyms":[{"name":"establishment of protein localisation to Golgi","type":"narrow"},{"name":"establishment of protein localization in Golgi","type":"narrow"},{"name":"establishment of protein localization to Golgi","type":"narrow"},{"name":"establishment of protein localization to Golgi apparatus","type":"narrow"},{"name":"protein localisation in Golgi apparatus","type":"exact"},{"name":"protein localization in Golgi apparatus","type":"exact"},{"name":"protein targeting to Golgi","type":"related"},{"name":"protein-Golgi targeting","type":"related"}],"termid":"GO:0034067","terms_by_termid":{"GO:0034067":null}}


id: PBO:0082787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; responsible for recognition and initial import steps for all mitochondrially directed proteins; promotes assembly and stability of the TOM complex","termid":"PBO:0082787"}


id: MONDO:0032636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 33","secondary_identifiers":["MEDGEN:1648420","DOID:0112097","GARD:16332","OMIM:618253","UMLS:C4748840"],"synonyms":[{"name":"MC1DN33","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 33","type":"related"}],"termid":"MONDO:0032636","xrefs":{"Monarch":{"xref_id":"0032636"}}}


id: PBO:0052816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 82","termid":"PBO:0052816"}


id: FYPO:0008233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain a normal number of microtubule bundles.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"microtubule bundles present in normal numbers","termid":"FYPO:0008233"}


id: PATO:0000114
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000114 temperature sensitivity (obsolete PATO:0000114)","termid":"PATO:0000114"}


id: GO:1990351
data:
  {"annotated_genes":["SJAG_02564","SJAG_02897","SJAG_05204","SJAG_01913","SJAG_02504","SJAG_03490","SJAG_01763","SJAG_02105","SJAG_00542","SJAG_03962","SJAG_00438","SJAG_02023","SJAG_03337","SJAG_01355","SJAG_01471","SJAG_01817","SJAG_02782","SJAG_02646","SJAG_04122","SJAG_MIT37","SJAG_MIT20","SJAG_03925","SJAG_02524","SJAG_04677","SJAG_02516","SJAG_00836","SJAG_02598","SJAG_00915","SJAG_05629","SJAG_00136","SJAG_00985","SJAG_MIT09","SJAG_02693","SJAG_01490","SJAG_03050","SJAG_03324","SJAG_00080","SJAG_04208","SJAG_00212","SJAG_05294","SJAG_01731","SJAG_00687","SJAG_07006","SJAG_00891","SJAG_03114","SJAG_07003","SJAG_MIT03","SJAG_01077","SJAG_04955","SJAG_00976","SJAG_07007","SJAG_01949","SJAG_MIT15","SJAG_MIT04","SJAG_01397","SJAG_03406","SJAG_00601","SJAG_00755","SJAG_MIT13","SJAG_00516","SJAG_01447","SJAG_04675","SJAG_00133","SJAG_04015","SJAG_05315","SJAG_01190","SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78251,78010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033573"},{"annotations":[88978,90714,116654,93115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042719"},{"annotations":[97285,70981,96806,76103],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990429"},{"annotations":[102674,98255,105436,94754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990531"},{"annotations":[60068,65280,119473,66851,67510,116232,95180,67174,104020,60533,57315,57875,64541,64038,119468,108263,119462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045259"},{"annotations":[113785,119458,76031,72465,61925,76184,74068,104418,118076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045275"},{"annotations":[119453,119481,115041,114611,72393,74652,108651,115846,119431,89546,68249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045277"},{"annotations":[95982,100280,104249,96163,62042,90483,92379],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[71599,88355,103010,119127,99246,96943,110241,60676],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"},{"annotations":[74816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"A protein complex facilitating transport of molecules (proteins, small molecules, nucleic acids) into, out of or within a cell, or between cells.","definition_xrefs":["PMID:15449578","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":67,"genes_by_uniquename":{"SJAG_00080":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00212":null,"SJAG_00438":null,"SJAG_00516":null,"SJAG_00542":null,"SJAG_00601":null,"SJAG_00687":null,"SJAG_00755":null,"SJAG_00836":null,"SJAG_00891":null,"SJAG_00915":null,"SJAG_00976":null,"SJAG_00985":null,"SJAG_01077":null,"SJAG_01190":null,"SJAG_01355":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01490":null,"SJAG_01731":null,"SJAG_01763":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_01949":null,"SJAG_02023":null,"SJAG_02105":null,"SJAG_02504":null,"SJAG_02516":null,"SJAG_02524":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02646":null,"SJAG_02693":null,"SJAG_02782":null,"SJAG_02897":null,"SJAG_03050":null,"SJAG_03114":null,"SJAG_03324":null,"SJAG_03337":null,"SJAG_03406":null,"SJAG_03490":null,"SJAG_03925":null,"SJAG_03962":null,"SJAG_04015":null,"SJAG_04122":null,"SJAG_04208":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04955":null,"SJAG_05204":null,"SJAG_05229":null,"SJAG_05294":null,"SJAG_05315":null,"SJAG_05629":null,"SJAG_07003":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT09":null,"SJAG_MIT13":null,"SJAG_MIT15":null,"SJAG_MIT20":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transporter complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"termid":"GO:1990351","terms_by_termid":{"GO:0000220":null,"GO:0000221":null,"GO:0005891":null,"GO:0033573":null,"GO:0042719":null,"GO:0045259":null,"GO:0045275":null,"GO:0045277":null,"GO:1990429":null,"GO:1990531":null}}


id: GO:0014874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus. This occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"},{"relation_name":"part_of","term_name":"regulation of muscle adaptation","termid":"GO:0043502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to stimulus involved in regulation of muscle adaptation","synonyms":[{"name":"response to stimulus involved in regulation of muscle plasticity","type":"related"}],"termid":"GO:0014874"}


id: PBO:0089392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synembryn family GEF, Ric8","termid":"PBO:0089392"}


id: PBO:0013107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3B","termid":"PBO:0013107"}


id: PBO:0043783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase B2","termid":"PBO:0043783"}


id: PBO:0001377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthine phosphoribosyltransferase (predicted)","termid":"PBO:0001377"}


id: PBO:0050534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15-hydroxyprostaglandin dehydrogenase","termid":"PBO:0050534"}


id: GO:2000088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mesonephric glomerulus development.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glomerulus development","termid":"GO:0090194"},{"relation_name":"is_a","term_name":"regulation of mesonephric glomerulus development","termid":"GO:2000087"},{"relation_name":"negatively_regulates","term_name":"mesonephric glomerulus development","termid":"GO:0061224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesonephric glomerulus development","termid":"GO:2000088"}


id: GO:1990328
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that cycles between the nucleus where it is part of the RNA polymerase II and the cytoplasmic mRNA processing body where it mediates the two major cytoplasmic mRNA decay pathways.","definition_xrefs":["GOC:bhm","PMID:15591044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RPB4-RPB7 complex","synonyms":[{"name":"RNA polymerase II, RPB4-RPB7 subcomplex","type":"narrow"}],"termid":"GO:1990328"}


id: MONDO:0008827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive pseudorheumatoid arthropathy (dysplasia) of childhood (PPAC; PPD) presents as spondyloepiphyseal dysplasia (SED) tarda with progressive arthropathy and is described as a specific autosomal recessive subtype of SED.","definition_xrefs":["Orphanet:1159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"progressive pseudorheumatoid arthropathy of childhood","secondary_identifiers":["GARD:9184","ICD9:756.9","UMLS:C0432215","MESH:C535387","OMIM:208230","icd11.foundation:280808713","MEDGEN:96581","DOID:0090004","SCTID:254065005"],"synonyms":[{"name":"PPAC","type":"related"},{"name":"PPD","type":"related"},{"name":"SEDT-PA","type":"related"},{"name":"arthropathy, progressive pseudorheumatoid, of childhood","type":"related"},{"name":"progressive pseudorheumatoid arthropathy of childhood","type":"exact"},{"name":"progressive pseudorheumatoid chondrodysplasia","type":"related"},{"name":"progressive pseudorheumatoid dysplasia","type":"related"},{"name":"spondyloepiphyseal dysplasia tarda - progressive arthropathy","type":"related"},{"name":"spondyloepiphyseal dysplasia tarda with progressive arthropathy","type":"related"},{"name":"spondyloepiphyseal dysplasia tarda-progressive arthropathy syndrome","type":"exact"}],"termid":"MONDO:0008827","xrefs":{"Monarch":{"xref_id":"0008827"}}}


id: PR:P87311
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC31F10.10c gene.","definition_xrefs":["UniProtKB:P87311","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYND-type zinc finger protein C31F10.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.10c","synonyms":[{"name":"Spom972h-SPBC31F10.10c","type":"exact"}],"termid":"PR:P87311"}


id: MOD:01644
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-phenylalanine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-phenylalanine removal","termid":"MOD:01644"}


id: GO:0018981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving triethanolamine, a combustible, hygroscopic, colorless liquid commonly used in dry-cleaning solutions, cosmetics, detergents, textile processing, wool scouring, and as a corrosion inhibitor and pharmaceutical alkalizing agent.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete triethanolamine metabolic process (obsolete GO:0018981)","synonyms":[{"name":"triethanolamine metabolism","type":"exact"}],"termid":"GO:0018981"}


id: PBO:0000993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent 3' to 5' DNA helicase, FANCM ortholog Fml1","termid":"PBO:0000993"}


id: PBO:0071138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 1","termid":"PBO:0071138"}


id: GO:0103106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: brassinolide + UDP-alpha-D-glucose = brassinolide-23-O-glucoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete brassinolide 23-O-glucosyltransferase activity (obsolete GO:0103106)","termid":"GO:0103106"}


id: PBO:0062350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily M member 1","termid":"PBO:0062350"}


id: PBO:0090694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial proton-transporting ATP synthase inhibitor Inh1","termid":"PBO:0090694"}


id: MONDO:0006523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory skin condition affecting children. It is often associated with Epstein-Barr virus infection, hepatitis B infection or cytomegalovirus infection. It is characterized by the presence of cutaneous rashes and patches on the palms and soles. The trunk is not affected.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acrodermatitis","secondary_identifiers":["SCTID:8197001","DOID:2722","ICD9:686.8","MEDGEN:1301","EFO:1000664","NCIT:C84532","CSP:4008-0032","MESH:D000169","UMLS:C0001197"],"termid":"MONDO:0006523","xrefs":{"Monarch":{"xref_id":"0006523"}}}


id: PBO:0003508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin (predicted)","termid":"PBO:0003508"}


id: GO:2000921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arabinoxylan-containing compound catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xylan catabolic process","termid":"GO:2001000"},{"relation_name":"regulates","term_name":"arabinoxylan-containing compound catabolic process","termid":"GO:2000888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of arabinoxylan-containing compound catabolic process","synonyms":[{"name":"regulation of arabinoxylan catabolism","type":"exact"}],"termid":"GO:2000921"}


id: GO:0060468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of fertilization process that takes place as part of egg activation, ensuring that only a single sperm fertilizes the egg.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fertilization","termid":"GO:0060467"},{"relation_name":"part_of","term_name":"egg activation","termid":"GO:0007343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prevention of polyspermy","synonyms":[{"name":"negative regulation of fertilization involved in egg activation","type":"exact"},{"name":"polyspermy block","type":"exact"}],"termid":"GO:0060468"}


id: GO:0015737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which galacturonate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexuronate transmembrane transport","termid":"GO:0015736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"galacturonate transmembrane transport","synonyms":[{"name":"galacturonate transport","type":"related"}],"termid":"GO:0015737"}


id: FYPO:0000344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"},{"relation_name":"is_a","term_name":"enlarged nucleus","termid":"FYPO:0002255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002403","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"enlarged nucleus during vegetative growth","synonyms":[{"name":"enlarged nuclei during vegetative growth","type":"exact"},{"name":"enlarged nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000344"}


id: GO:0060325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the face are generated and organized. The face is the ventral division of the head.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"head morphogenesis","termid":"GO:0060323"},{"relation_name":"part_of","term_name":"face development","termid":"GO:0060324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"face morphogenesis","termid":"GO:0060325"}


id: FYPO:0007434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells do not change the length at which they divide to the same extent as normal upon shifting from a good nitrogen source to a poor nitrogen source. Normally, cells divide at a smaller size after shifting to a poor nitrogen source; in mutants the size difference is less pronounced between media with good versus poor nitrogen sources. Good (or rich) nitrogen sources are distinguished from poor sources based on how readily nitrogen is assimilated into cellular metabolism. In microorganisms, good nitrogen sources generally support higher cell population growth rates than poor sources. In fission yeast, cells divide at a smaller size when grown on a poor nitrogen source than in nitrogen-rich media; proline is commonly used as a poor nitrogen source.","definition_xrefs":["PMID:10640599","PMID:25639242","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation upon nitrogen source shift","termid":"FYPO:0005206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"attenuated change in cell size at division upon shift to poor nitrogen source","synonyms":[{"name":"attenuated change in cell size at division upon shift to poor nitrogen source during mitotic cell cycle","type":"related"},{"name":"attenuated change in cell size at division upon shift to poor nitrogen source during vegetative growth","type":"exact"},{"name":"decreased change in cell length at division after shift to poor nitrogen source","type":"exact"}],"termid":"FYPO:0007434"}


id: PBO:0035969
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H4-K20_methylation_during_vegetative_growth","termid":"PBO:0035969"}


id: _global:gained
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X gained Y if X is a variant_of X' and Y part of X but not X'.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gained","termid":"_global:gained"}


id: GO:0010937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytoplasmic microtubule depolymerization.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule depolymerization","termid":"GO:0031114"},{"relation_name":"regulates","term_name":"cytoplasmic microtubule depolymerization","termid":"GO:0010938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"regulation of cytoplasmic microtubule depolymerization","termid":"GO:0010937"}


id: PBO:0080754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-C motif chemokine ligand 2","termid":"PBO:0080754"}


id: PBO:0063679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 3","termid":"PBO:0063679"}


id: MONDO:0014784
data:
  {"annotated_genes":["SJAG_04500"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86110],"is_not":false,"summary":null,"term":"MONDO:0014784"}]},"cv_name":"mondo","definition":"Severe hypotonia-psychomotor developmental delay-strabismus-cardiac septal defect syndrome is a rare, genetic, non-dystrophic congenital myopathy disorder characterized by a neonatal-onset of severe generalized hypotonia associated with mild psychomotor delay, congenital strabismus with abducens nerve palsy, and atrial and/or ventricular septal defects. Cryptorchidism is commonly reported in male patients and muscle biopsy typically reveals increased variability in muscle fiber size.","definition_xrefs":["Orphanet:467176"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04500":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005336"],"is_obsolete":false,"name":"severe hypotonia-psychomotor developmental delay-strabismus-cardiac septal defect syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:902080","GARD:17840","OMIM:616816","UMLS:C4225196"],"synonyms":[{"name":"IHPMR","type":"exact"},{"name":"hypotonia, infantile, with psychomotor retardation","type":"exact"}],"termid":"MONDO:0014784","terms_by_termid":{"MONDO:0014784":null},"xrefs":{"Monarch":{"xref_id":"0014784"}}}


id: GO:0031895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a V1B vasopressin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasopressin receptor binding","termid":"GO:0031893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"V1B vasopressin receptor binding","synonyms":[{"name":"V1B vasopressin receptor ligand","type":"narrow"}],"termid":"GO:0031895"}


id: PBO:0083253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by sequence comparison with hemiascomycetous yeast species","termid":"PBO:0083253"}


id: GO:0044332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell contributing to the establishment, maintenance and elaboration of the dorsal/ventral axis.","definition_xrefs":["GOC:jl","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in dorsal/ventral axis specification (obsolete GO:0044332)","synonyms":[{"name":"Wnt receptor signaling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"Wnt receptor signalling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"Wnt-activated signaling pathway involved in dorsal/ventral axis specification","type":"exact"}],"termid":"GO:0044332"}


id: MONDO:1011121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Orchitis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orchitis, non-human animal","termid":"MONDO:1010277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orchitis, domestic cat","secondary_identifiers":["OMIA:000745-9685"],"termid":"MONDO:1011121","xrefs":{"Monarch":{"xref_id":"1011121"}}}


id: PBO:0050868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin degrading enzyme","termid":"PBO:0050868"}


id: MONDO:0009838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder characterized by rigid, thick skin that covers the entire body and affects movements. The movement of the chest and abdomen is severely restricted. Affected individuals develop respiratory insufficiency which may lead to death.","definition_xrefs":["NCIT:C126559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Parana hard-skin syndrome","secondary_identifiers":["OMIM:260530","Orphanet:2812","MEDGEN:337964","MESH:C564905","UMLS:C1850079","GARD:2598"],"synonyms":[{"name":"Parana hard skin syndrome","type":"related"},{"name":"Parana hard-skin syndrome","type":"exact"},{"name":"hard skin syndrome Parana type","type":"exact"},{"name":"hard skin syndrome, Parana type","type":"exact"},{"name":"hard-skin syndrome, Parana type","type":"exact"}],"termid":"MONDO:0009838","xrefs":{"Monarch":{"xref_id":"0009838"}}}


id: GO:0032328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of alanine, 2-aminopropanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"alanine transport","termid":"GO:0032328"}


id: RO:0002244
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Any relationship between an exposure event or process and any other entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related_via_exposure_to","termid":"RO:0002244"}


id: GO:0007281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an immature germ cell over time, from its formation to the mature structure (gamete). A germ cell is any reproductive cell in a multicellular organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ cell development","secondary_identifiers":["Reactome:R-HSA-9827857"],"synonyms":[{"name":"gametogenesis","type":"narrow"},{"name":"germ-cell development","type":"exact"},{"name":"primordial germ cell development","type":"narrow"}],"termid":"GO:0007281"}


id: PBO:0088506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger, RING-type, Rad16-like","termid":"PBO:0088506"}


id: GO:0046602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the separation of duplicated centrosome components at the beginning of mitosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"mitotic centrosome separation","termid":"GO:0007100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic centrosome separation","termid":"GO:0046602"}


id: GO:0042781
data:
  {"annotated_genes":["SJAG_00997","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70511,80679],"is_not":false,"summary":null,"term":"GO:0042781"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA, removing extra 3' nucleotides from tRNA precursor, generating 3' termini of tRNAs. A 3'-hydroxy group is left at the tRNA terminus and a 5'-phosphoryl group is left at the trailer molecule.","definition_xrefs":["EC:3.1.26.11","PMID:12032089","PMID:21208191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA-specific ribonuclease activity","termid":"GO:0004549"},{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016891"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0140098","GO:0140101","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"3'-tRNA processing endoribonuclease activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:3.1.26.11-RXN"],"synonyms":[{"name":"3 tRNase activity","type":"related"},{"name":"3' tRNA processing endoribonuclease activity","type":"exact"},{"name":"3' tRNase activity","type":"exact"},{"name":"RNase Z activity","type":"broad"},{"name":"ribonuclease Z activity","type":"broad"},{"name":"tRNA 3 endonuclease activity","type":"related"},{"name":"tRNA 3' endonuclease activity","type":"exact"},{"name":"tRNAse Z","type":"related"}],"termid":"GO:0042781","terms_by_termid":{"GO:0042781":null}}


id: GO:0097105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a presynaptic membrane, including any proteins associated with the membrane, but excluding other cellular components. A presynaptic membrane is a specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction.","definition_xrefs":["PMID:15797875","GOC:pr","PMID:18550748","GOC:BHF","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"is_a","term_name":"presynaptic membrane organization","termid":"GO:0097090"},{"relation_name":"part_of","term_name":"presynapse assembly","termid":"GO:0099054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"presynaptic membrane assembly","synonyms":[{"name":"pre-synaptic membrane assembly","type":"exact"}],"termid":"GO:0097105"}


id: GO:0014706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a striated muscle over time, from its formation to the mature structure. Striated muscle contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle. Skeletal muscle myoblasts fuse to form myotubes and eventually multinucleated muscle fibers. The fusion of cardiac cells is very rare and can only form binucleate cells.","definition_xrefs":["CL:0000737","GOC:dph","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue development","termid":"GO:0060537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle tissue development","termid":"GO:0014706"}


id: PBO:0058813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7855","termid":"PBO:0058813"}


id: GO:0016490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the peritrophic membrane, a tubular sheath of cuticle that shields the epithelial cells of the midgut from the gut contents. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of peritrophic membrane","synonyms":[{"name":"structural constituent of peritrophic matrix","type":"related"}],"termid":"GO:0016490"}


id: PBO:0082388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta-adaptin; large subunit of the clathrin associated protein complex (AP-2); involved in vesicle mediated transport; similar to mammalian beta-chain of the clathrin associated protein complex","termid":"PBO:0082388"}


id: MONDO:0017222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The classic form of Pelizaeus-Merzbacher disease (PMD) is the infantile form of PMD.","definition_xrefs":["Orphanet:280219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Pelizeaus-Merzbacher spectrum disorder","termid":"MONDO:0010714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Pelizaeus-Merzbacher disease, classic form","secondary_identifiers":["icd11.foundation:1613420896","GARD:21073","MEDGEN:155959","UMLS:C0751916","SCTID:87607002"],"synonyms":[{"name":"classic PMD","type":"exact"}],"termid":"MONDO:0017222","xrefs":{"Monarch":{"xref_id":"0017222"}}}


id: MONDO:0017258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic panuveitis is a rare inflammatory eye disease, of unknown etiology, characterized by generalized inflammation of the uvea (iris, ciliary body, choroid), retina and vitreous with consequent ciliary spasm and posterior synechiae formation, leading to acute or chronic, unilateral or bilateral visual impairment and ocular discomfort or pain. Patients present an increased risk of development of cataracts, secondary glaucoma, cystoid macular edema and/or retinal detachment. It could potentially result in vision loss.","definition_xrefs":["Orphanet:280921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"panuveitis","termid":"MONDO:0017255"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"idiopathic panuveitis","secondary_identifiers":["MEDGEN:1633708","UMLS:C4707884","GARD:21100","SCTID:766933000"],"termid":"MONDO:0017258","xrefs":{"Monarch":{"xref_id":"0017258"}}}


id: PBO:0069756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1039, pseudogene","termid":"PBO:0069756"}


id: PBO:0001173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA/TPR/DNAJ domain protein Ucp7","termid":"PBO:0001173"}


id: PBO:0027878
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleosome_binding","termid":"PBO:0027878"}


id: PBO:0076419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 9b pseudogene 2","termid":"PBO:0076419"}


id: PBO:0088214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger C2H2-type","termid":"PBO:0088214"}


id: GO:0032187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a contractile ring is positioned or maintained in a specific location, in the context of cytokinesis that takes place as part of a cell cycle.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete actomyosin contractile ring localization (obsolete GO:0032187)","synonyms":[{"name":"contractile ring localisation involved in cell cycle cytokinesis","type":"exact"},{"name":"contractile ring localization involved in cell cycle cytokinesis","type":"exact"}],"termid":"GO:0032187"}


id: PBO:0091823
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by A. thaliana cdc2aAt","termid":"PBO:0091823"}


id: PBO:0076354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 1","termid":"PBO:0076354"}


id: PBO:0074598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 10","termid":"PBO:0074598"}


id: PBO:0061061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NKAIN1 pseudogene 1","termid":"PBO:0061061"}


id: GO:0051270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the movement of a cellular component.","definition_xrefs":["GOC:jl","GOC:ai","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular component movement (obsolete GO:0051270)","synonyms":[{"name":"regulation of cell movement","type":"related"},{"name":"regulation of cellular component motion","type":"exact"}],"termid":"GO:0051270"}


id: GO:0018498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate + NAD+ = 3-(2,3-dihydroxyphenyl)propanoate + H+ + NADH. Also converts (2E)-3-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)prop-2-enoate to (2E)-3-(2,3-dihydroxyphenyl)prop-2-enoate.","definition_xrefs":["EC:1.3.1.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase activity","secondary_identifiers":["UM-BBD_enzymeID:r0436","UM-BBD_enzymeID:r1620","MetaCyc:PHENPRODIOLDEHYDROG-RXN"],"termid":"GO:0018498"}


id: PBO:0001692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SnoRNA (predicted)","termid":"PBO:0001692"}


id: PATO:0000891
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male fertility quality inhering in a male by virtue of the bearer's being capable of initiating, sustaining, or supporting reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male fertility","termid":"PATO:0000279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male fertile","termid":"PATO:0000891"}


id: PBO:0036190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_phosphorylation_during_vegetative_growth","termid":"PBO:0036190"}


id: GO:0018197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-aspartic acid.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-aspartic acid modification","termid":"GO:0018197"}


id: PBO:0071555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 20","termid":"PBO:0071555"}


id: MONDO:0014480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 9","secondary_identifiers":["GARD:18361","MEDGEN:863566","OMIM:616067","UMLS:C4015129","DOID:0111770"],"synonyms":[{"name":"46,XY SEX reversal 9","type":"related"},{"name":"46,XY Sex reversal type 9","type":"exact"},{"name":"46,XY Sex reversal, Zfpm2-related","type":"related"},{"name":"46,XY sex reversal 9","type":"exact"},{"name":"46XY sex reversal 9","type":"exact"},{"name":"SRXY9","type":"related"}],"termid":"MONDO:0014480","xrefs":{"Monarch":{"xref_id":"0014480"}}}


id: FYECO:0000421
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which (R,Z)-10-hydroxyoctadec-8-enoic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ (8E,10S)-10-hydroxy-8-octadecenoic acid","synonyms":[{"name":"+ (R,Z)-10-hydroxyoctadec-8-enoic acid","type":"exact"}],"termid":"FYECO:0000421"}


id: PBO:0057720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-5","termid":"PBO:0057720"}


id: GO:0010738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of protein kinase A signaling. PKA signaling is the series of reactions, mediated by the intracellular serine/threonine kinase protein kinase A, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"protein kinase A signaling","termid":"GO:0010737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of protein kinase A signaling","synonyms":[{"name":"regulation of PKA signaling cascade","type":"related"},{"name":"regulation of protein kinase A signaling cascade","type":"related"},{"name":"regulation of protein kinase A signalling cascade","type":"related"}],"termid":"GO:0010738"}


id: MONDO:0018944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diverse group of pregnancy-related tumors characterized by excessive proliferation of trophoblasts. Representative examples include hydatidiform mole, gestational choriocarcinoma, and placental site trophoblastic tumor.","definition_xrefs":["NCIT:C4699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trophoblastic neoplasm","termid":"MONDO:0002872"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gestational trophoblastic neoplasm","secondary_identifiers":["MEDGEN:210107","GARD:6498","icd11.foundation:1972855304","NCIT:C3110","ICD9:630","Orphanet:59305","DOID:3590","SCTID:609519004","UMLS:C1135868","MedDRA:10061988","MESH:D006828","SCTID:44782008"],"synonyms":[{"name":"GTN","type":"exact"},{"name":"GTT","type":"exact"},{"name":"gestational trophoblastic disease","type":"broad"},{"name":"gestational trophoblastic neoplasia","type":"exact"},{"name":"gestational trophoblastic tumor","type":"exact"},{"name":"gestational trophoblastic tumour","type":"exact"},{"name":"hydatidiform mole","type":"related"},{"name":"molar pregnancy","type":"related"}],"termid":"MONDO:0018944","xrefs":{"Monarch":{"xref_id":"0018944"}}}


id: PBO:0031293
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_cell_cycle_checkpoint_phenotype","termid":"PBO:0031293"}


id: GO:0032247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a purine nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleoside transport","termid":"GO:0032243"},{"relation_name":"is_a","term_name":"regulation of purine nucleoside transport","termid":"GO:0032245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of purine nucleoside transport","synonyms":[{"name":"down regulation of purine nucleoside transport","type":"exact"},{"name":"down-regulation of purine nucleoside transport","type":"exact"},{"name":"downregulation of purine nucleoside transport","type":"exact"},{"name":"inhibition of purine nucleoside transport","type":"narrow"}],"termid":"GO:0032247"}


id: GO:0106319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (4R)-limonene + NADH + H+ + O2 = NAD+ + H2O + (4R)-limonene-1,2-epoxide.","definition_xrefs":["RHEA:26093"],"gene_count":0,"genotype_count":0,"name":"obsolete (R)-limonene 1,2-monooxygenase NADH activity (obsolete GO:0106319)","termid":"GO:0106319"}


id: GO:0060500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the branching morphogenesis by which the initial primordium of the lung is formed.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in lung bud formation (obsolete GO:0060500)","termid":"GO:0060500"}


id: GO:0009239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of enterobactin, a catechol-derived siderochrome of Enterobacteria; enterobactin (N',N',N''-(2,6,10-trioxo-1,5,9-triacyclodecane-3,7,11-triyl)tris(2,3-dihydroxy)benzamide) is a self-triester of 2,3-dihydroxy-N-benzoyl-L-serine and a product of the shikimate pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enterobactin metabolic process","termid":"GO:0009238"},{"relation_name":"is_a","term_name":"catechol-containing siderophore biosynthetic process","termid":"GO:0019540"},{"relation_name":"is_a","term_name":"macrolide biosynthetic process","termid":"GO:0033068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"enterobactin biosynthetic process","secondary_identifiers":["GO:0031191","MetaCyc:ENTBACSYN-PWY","GO:0031192"],"synonyms":[{"name":"enterobactin anabolism","type":"exact"},{"name":"enterobactin biosynthesis","type":"exact"},{"name":"enterobactin biosynthetic process, peptide formation","type":"narrow"},{"name":"enterobactin biosynthetic process, peptide modification","type":"narrow"},{"name":"enterobactin formation","type":"exact"},{"name":"enterobactin synthesis","type":"exact"},{"name":"enterobactin synthetase","type":"related"},{"name":"enterochelin biosynthesis","type":"exact"},{"name":"enterochelin biosynthetic process","type":"exact"}],"termid":"GO:0009239"}


id: PBO:0049806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 1 pseudogene 1","termid":"PBO:0049806"}


id: FYPO:0008399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a lipid peroxidation is increased during stationary phase.","definition_xrefs":["PMID:35657410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased lipid peroxidation","termid":"FYPO:0008397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased lipid peroxidation during stationary phase","termid":"FYPO:0008399"}


id: GO:0032628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-24 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-24 production","secondary_identifiers":["GO:0072622","GO:0045524"],"synonyms":[{"name":"IL-24 production","type":"exact"},{"name":"MDA7 production","type":"narrow"},{"name":"ST16 production","type":"narrow"},{"name":"interleukin-24 biosynthetic process","type":"narrow"},{"name":"interleukin-24 secretion","type":"narrow"}],"termid":"GO:0032628"}


id: GO:1990893
data:
  {"annotated_genes":["SJAG_00646","SJAG_00207"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88325,112062],"is_not":false,"summary":null,"term":"GO:1990893"}]},"cv_name":"biological_process","definition":"The cell cycle process in which centromere chromatin structure is compacted prior to and during mitosis.","definition_xrefs":["PMID:21633354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000070","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic chromosome centromere condensation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic chromosome condensation at kinetochore","type":"exact"}],"termid":"GO:1990893","terms_by_termid":{"GO:1990893":null}}


id: GO:2001246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylcholine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"is_a","term_name":"negative regulation of phosphatidylcholine metabolic process","termid":"GO:0150174"},{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine biosynthetic process","termid":"GO:2001245"},{"relation_name":"negatively_regulates","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylcholine biosynthetic process","synonyms":[{"name":"negative regulation of phosphatidylcholine anabolism","type":"exact"},{"name":"negative regulation of phosphatidylcholine biosynthesis","type":"exact"},{"name":"negative regulation of phosphatidylcholine formation","type":"exact"},{"name":"negative regulation of phosphatidylcholine synthesis","type":"exact"}],"termid":"GO:2001246"}


id: PBO:0072868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAT1 divergent transcript","termid":"PBO:0072868"}


id: PBO:0029792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_actin_cortical_patch","termid":"PBO:0029792"}


id: PBO:0000867
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.14","termid":"PBO:0000867"}


id: PBO:0043010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase 1","termid":"PBO:0043010"}


id: PBO:0059027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 16","termid":"PBO:0059027"}


id: PBO:0030838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_adenine_import","termid":"PBO:0030838"}


id: PBO:0050588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein 1","termid":"PBO:0050588"}


id: GO:0072635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-31 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","GOC:BHF","PMID:30328794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-31 production","secondary_identifiers":["GO:0072636"],"synonyms":[{"name":"IL-31 production","type":"exact"},{"name":"interleukin-31 secretion","type":"narrow"}],"termid":"GO:0072635"}


id: GO:0034922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,5-dihydroxypyrene + O2 = phenanthrene-4,5-dicarboxylate + 2 H+.","definition_xrefs":["UM-BBD_reactionID:r0936"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,5-dihydroxypyrene dioxygenase activity (obsolete GO:0034922)","termid":"GO:0034922"}


id: GO:0098575
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the lysosomal membrane that faces the lumen.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of membrane","termid":"GO:0098576"},{"relation_name":"part_of","term_name":"lysosomal membrane","termid":"GO:0005765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"lumenal side of lysosomal membrane","synonyms":[{"name":"internal leaflet of lysosomal membrane","type":"exact"},{"name":"internal side of lysosomal membrane","type":"exact"}],"termid":"GO:0098575"}


id: MONDO:0019774
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Holmes-Gang syndrome is an X-linked mental retardation (XLMR) syndrome belonging to the group of conditions characterized by the association of intellectual deficit with hypotonic facies (Mental retardation, X-linked-hypotonic facies).","definition_xrefs":["Orphanet:93970"],"gene_count":0,"genotype_count":0,"name":"obsolete Holmes-Gang syndrome (obsolete MONDO:0019774)","termid":"MONDO:0019774","xrefs":{"Monarch":{"xref_id":"0019774"}}}


id: PR:P87074
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tumor suppressor p53-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"DNA repair protein Crb2 (Schizosaccharomyces pombe)","termid":"PR:000029999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein Crb2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC342.05","secondary_identifiers":["UniProtKB:P87074"],"synonyms":[{"name":"DNA repair protein rhp9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TP53BP1","type":"exact"}],"termid":"PR:P87074"}


id: GO:0006591
data:
  {"annotated_genes":["SJAG_00635","SJAG_00695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98500],"is_not":false,"summary":null,"term":"GO:0006591"},{"annotations":[72558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00635":null,"SJAG_00695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ornithine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ornithine metabolism","type":"exact"}],"termid":"GO:0006591","terms_by_termid":{"GO:0006591":null,"GO:0006592":null}}


id: MONDO:0018868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare lysosomal storage disorder characterized by intralysosomal accumulation of sulfatides in various tissues, leading to progressive deterioration of motor and neurocognitive function.","definition_xrefs":["Orphanet:512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"sphingolipidosis","termid":"MONDO:0019255"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0002525","MONDO:0005244","MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"metachromatic leukodystrophy","secondary_identifiers":["NANDO:1200078","UMLS:C0023522","GARD:3230","icd11.foundation:172326564","MedDRA:10067609","DOID:10581","MESH:D007966","NORD:1369","NCIT:C61251","SCTID:396338004","MEDGEN:6071","SCTID:238031009","NANDO:2200560","SCTID:66521008"],"synonyms":[{"name":"MLD","type":"exact"},{"name":"Scholz cerebral sclerosis","type":"exact"},{"name":"arylsulfatase A deficiency","type":"exact"},{"name":"deficiency of cerebroside-sulfatase","type":"exact"},{"name":"sulfatide lipoidosis","type":"exact"}],"termid":"MONDO:0018868","xrefs":{"Monarch":{"xref_id":"0018868"}}}


id: GO:0007287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of mitochondria during insect spermatid differentiation to form two masses, which wrap around each other to form a densely packed sphere called the Nebenkern.","definition_xrefs":["GOC:bf","ISBN:0879694238","PMID:9550716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"Nebenkern assembly","synonyms":[{"name":"Nebenkern formation","type":"related"}],"termid":"GO:0007287"}


id: MONDO:1011457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glaucoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, non-human animal","secondary_identifiers":["OMIA:000411"],"termid":"MONDO:1011457","xrefs":{"Monarch":{"xref_id":"1011457"}}}


id: PBO:0074912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 83A","termid":"PBO:0074912"}


id: GO:0034691
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphaE subunit and one beta7 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"integrin alphaE-beta7 complex","synonyms":[{"name":"Itgae-Itgb7 complex","type":"narrow"}],"termid":"GO:0034691"}


id: PBO:0045348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol kinase","termid":"PBO:0045348"}


id: PBO:0086840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein with sequence similar to hydroxyacid dehydrogenases; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086840"}


id: PBO:0039282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 11, pseudogene","termid":"PBO:0039282"}


id: PBO:0076110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 17","termid":"PBO:0076110"}


id: MONDO:0018815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A locally aggressive and destructive benign cystic lesion of the bone. It is characterized by the formation of multiloculated hemorrhagic cystic spaces which are separated by fibrous septa. It can arise from any bone, but usually affects the metaphysis of long bones. It manifests with pain and swelling and may recur following curettage.","definition_xrefs":["NCIT:C3516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneurysmal bone cyst","secondary_identifiers":["GARD:21982","OMIM:606179","Orphanet:480553","HP:0012063","icd11.foundation:1603788294","MEDGEN:57758","EFO:1001760","UMLS:C0152244","ICD9:733.22","MESH:D017824","SCTID:203468000"],"synonyms":[{"name":"ABC","type":"exact"},{"name":"aneurysmal bone cyst","type":"exact"},{"name":"aneurysmal bone cyst (disease)","type":"exact"},{"name":"aneurysmal bone cysts","type":"exact"},{"name":"aneurysmal cyst of bone","type":"exact"},{"name":"aneurysmal cyst of the bone","type":"exact"}],"termid":"MONDO:0018815","xrefs":{"Monarch":{"xref_id":"0018815"}}}


id: PBO:0089767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor poly(A) polymerase Pla1","termid":"PBO:0089767"}


id: GO:1901724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation involved in kidney development.","definition_xrefs":["GOC:TermGenie","PMID:18182616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"},{"relation_name":"positively_regulates","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation involved in kidney development","synonyms":[{"name":"activation of cell proliferation involved in kidney development","type":"narrow"},{"name":"up regulation of cell proliferation involved in kidney development","type":"exact"},{"name":"up-regulation of cell proliferation involved in kidney development","type":"exact"},{"name":"upregulation of cell proliferation involved in kidney development","type":"exact"}],"termid":"GO:1901724"}


id: MONDO:0014372
data:
  {"annotated_genes":["SJAG_01897"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86767],"is_not":false,"summary":null,"term":"MONDO:0014372"}]},"cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the TTLL5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"TTLL5-related retinopathy","termid":"MONDO:1040038"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 19","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4014501","MEDGEN:862938","GARD:16022","OMIM:615860","DOID:0111025"],"synonyms":[{"name":"CORD19","type":"exact"},{"name":"TTLL5 cone-rod dystrophy","type":"exact"},{"name":"cone-rod dystrophy 19","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in TTLL5","type":"exact"},{"name":"cone-rod dystrophy type 19","type":"exact"}],"termid":"MONDO:0014372","terms_by_termid":{"MONDO:0014372":null},"xrefs":{"Monarch":{"xref_id":"0014372"}}}


id: MONDO:0023557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process affecting the vagina. Symptoms include pain and purulent discharge.","definition_xrefs":["NCIT:C84353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginitis","termid":"MONDO:0002234"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infective vaginitis","secondary_identifiers":["UMLS:C0404521","icd11.foundation:1436361154","MEDGEN:140795","SCTID:237091009"],"synonyms":[{"name":"Infective vaginitis","type":"related"},{"name":"PV - Vaginal infection","type":"related"},{"name":"Vaginal Infection","type":"related"},{"name":"Vaginal infection","type":"related"},{"name":"vaginal infection","type":"exact"}],"termid":"MONDO:0023557","xrefs":{"Monarch":{"xref_id":"0023557"}}}


id: FYPO:0004261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during G2 phase of the mitotic cell cycle and during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during cellular response to ionizing radiation","termid":"FYPO:0002470"},{"relation_name":"is_a","term_name":"decreased protein phosphorylation during mitotic G2 phase","termid":"FYPO:0004111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during mitotic G2 phase during cellular response to ionizing radiation","synonyms":[{"name":"decreased protein phosphorylation during cellular response to ionizing radiation during G2 phase of mitotic cell cycle","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to ionizing radiation during mitotic G2 phase","type":"exact"},{"name":"decreased protein phosphorylation during mitotic G2 phase during cellular response to IR","type":"exact"},{"name":"decreased protein phosphorylation during mitotic G2 phase during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during mitotic G2 phase during cellular response to IR","type":"exact"},{"name":"reduced protein phosphorylation during mitotic G2 phase during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004261"}


id: GO:0018253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein active site cross-link from the alpha-carboxyl carbon of residue n, an alanine, serine or cysteine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with an oxidation of residue n+1 to form an active aldehyde.","definition_xrefs":["RESID:AA0187","RESID:AA0188","RESID:AA0184"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 5-imidazolinone glycine (obsolete GO:0018253)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 5-imidazolinone glycine","type":"exact"}],"termid":"GO:0018253"}


id: GO:0006436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling tryptophan to tryptophanyl-tRNA, catalyzed by tryptophanyl-tRNA synthetase. The tryptophanyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a tryptophan-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399","GO:0006520"],"is_obsolete":false,"name":"tryptophanyl-tRNA aminoacylation","termid":"GO:0006436"}


id: GO:0032299
data:
  {"annotated_genes":["SJAG_01884","SJAG_00400","SJAG_02039"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60645,70701,80563],"is_not":false,"summary":null,"term":"GO:0032299"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses ribonuclease H activity, in which the catalytic subunit is a member of the RNase H2 (or HII) class. For example, in Saccharomyces the complex contains Rnh201p, Rnh202p and Rnh203p.","definition_xrefs":["GOC:mah","PMID:14734815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00400":null,"SJAG_01884":null,"SJAG_02039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ribonuclease H2 complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"RNase H2 complex","type":"exact"}],"termid":"GO:0032299","terms_by_termid":{"GO:0032299":null}}


id: PBO:0082940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic glutaredoxin; thioltransferase, glutathione-dependent disulfide oxidoreductase involved in maintaining redox state of target proteins, also exhibits glutathione peroxidase activity, expression induced in response to stress; GRX2 has two in-frame start codons resulting in a shorter isoform that is retained in the cytosol and a longer form translocated to the mitochondrial matrix; GRX2 has a paralog, GRX1, that arose from the whole genome duplication","termid":"PBO:0082940"}


id: PR:Q09840
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aah2 gene.","definition_xrefs":["UniProtKB:Q09840","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.14c","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aah2","type":"exact"}],"termid":"PR:Q09840"}


id: GO:0018186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linkage of heme to peroxidase.","definition_xrefs":["RESID:AA0280","RESID:AA0279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-heme linkage","termid":"GO:0017003"},{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"peroxidase-heme linkage","synonyms":[{"name":"peroxidase-haem linkage","type":"exact"}],"termid":"GO:0018186"}


id: PBO:0074498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptosome associated protein 29","termid":"PBO:0074498"}


id: MONDO:0013555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Hermansky-Pudlak syndrome in which the cause of the disease is a mutation in the HPS3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hermansky-Pudlak syndrome without pulmonary fibrosis","termid":"MONDO:0016502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"Hermansky-Pudlak syndrome 3","secondary_identifiers":["DOID:0060541","GARD:18333","MEDGEN:854708","UMLS:C3888001","OMIM:614072"],"synonyms":[{"name":"HPS3","type":"related"},{"name":"HPS3 Hermansky-Pudlak syndrome","type":"exact"},{"name":"Hermansky-Pudlak syndrome 3","type":"exact"},{"name":"Hermansky-Pudlak syndrome caused by mutation in HPS3","type":"exact"},{"name":"Hermansky-Pudlak syndrome type 3","type":"exact"}],"termid":"MONDO:0013555","xrefs":{"Monarch":{"xref_id":"0013555"}}}


id: PBO:0080195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VENT homeobox pseudogene 3","termid":"PBO:0080195"}


id: PBO:0060267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 1","termid":"PBO:0060267"}


id: MONDO:0007271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial cutaneous collagenoma is a connective tissue nevus characterized by multiple, flesh-colored asymptomatic nodules distributed symmetrically on the trunk and upper arms (mainly on the upper two-thirds of the back), manifesting around adolescence. The skin biopsy reveals an accumulation of collagen fibers with reduction in the number of elastic fibers. Cardiac anomalies may be observed. Familial cutaneous collagenoma follows an autosomal dominant mode of transmission.","definition_xrefs":["Orphanet:53296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial cutaneous collagenoma","secondary_identifiers":["UMLS:C0406817","MESH:C562925","GARD:9799","MEDGEN:96073","OMIM:115250","SCTID:239139000","icd11.foundation:982220551"],"synonyms":[{"name":"collagenoma, familial cutaneous","type":"related"}],"termid":"MONDO:0007271","xrefs":{"Monarch":{"xref_id":"0007271"}}}


id: PBO:0088721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-1-phosphate guanyltransferase","termid":"PBO:0088721"}


id: PBO:0090360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UbiE family methyltransferase","termid":"PBO:0090360"}


id: FYPO:0005564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which stable microtubule bundles are shorter and thinner than normal. Stable microtubule bundles, also called Q-MT bundles, are found in quiescent cells.","definition_xrefs":["PomBase:mah","PMID:26124291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thin stable microtubule bundle","termid":"FYPO:0005560"},{"relation_name":"is_a","term_name":"short stable microtubule bundle","termid":"FYPO:0005562"},{"relation_name":"is_a","term_name":"short disorganized microtubule bundle","termid":"FYPO:0005796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0002399","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"short, thin stable microtubule bundle","synonyms":[{"name":"decreased stable microtubule bundle length and thickness","type":"exact"},{"name":"short, thin Q-MT bundles","type":"exact"},{"name":"short, thin quiescent cell MT bundle","type":"exact"},{"name":"short, thin quiescent cell microtubule bundle","type":"exact"},{"name":"short, thin stable microtubule array","type":"related"},{"name":"short, thin static microtubule bundle","type":"exact"}],"termid":"FYPO:0005564"}


id: PBO:0002961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps51 (predicted)","termid":"PBO:0002961"}


id: PBO:0045385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase 7","termid":"PBO:0045385"}


id: PBO:0091764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type region non-coding RNA","termid":"PBO:0091764"}


id: PBO:0090545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S21","termid":"PBO:0090545"}


id: GO:0080085
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of a protein and RNA component which binds the signal sequence of some proteins and facilitates their export to the chloroplast.","definition_xrefs":["PMID:17513500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal recognition particle","termid":"GO:0048500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"signal recognition particle, chloroplast targeting","termid":"GO:0080085"}


id: PR:O74381
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pof9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein pof9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.06c","synonyms":[{"name":"Spom972h-pof9","type":"exact"}],"termid":"PR:O74381"}


id: MONDO:0100335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poisoning that is caused by exposure to a local anesthetic.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"local anesthetic poisoning","synonyms":[{"name":"local anesthetic poisoning","type":"exact"}],"termid":"MONDO:0100335","xrefs":{"Monarch":{"xref_id":"0100335"}}}


id: PBO:0011105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADHX epimerase (predicted)","termid":"PBO:0011105"}


id: GO:1990021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of axon of a CA3 pyramidal neuron that projects to hippocampal area CA1.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon collateral","termid":"GO:0044303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Schaffer axon collateral","synonyms":[{"name":"Schaffer collateral","type":"broad"}],"termid":"GO:1990021"}


id: PBO:0057157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302c","termid":"PBO:0057157"}


id: GO:0032627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-23 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-23 production","secondary_identifiers":["GO:0072621","GO:0042240"],"synonyms":[{"name":"IL-23 production","type":"exact"},{"name":"interleukin-23 biosynthetic process","type":"narrow"},{"name":"interleukin-23 secretion","type":"narrow"}],"termid":"GO:0032627"}


id: MONDO:0033558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammation, immune dysregulation, and eosinophilia","secondary_identifiers":["OMIM:618999","MEDGEN:1750270","UMLS:C5436572"],"synonyms":[{"name":"AIIDE","type":"related"},{"name":"AUTOINFLAMMATION, IMMUNE DYSREGULATION, AND EOSINOPHILIA","type":"related"},{"name":"Atopic Dermatitis, Enteritis, Colitis, and Eosinophilia","type":"related"}],"termid":"MONDO:0033558","xrefs":{"Monarch":{"xref_id":"0033558"}}}


id: PBO:0002991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline specific plasma membrane permease Put4 (predicted)","termid":"PBO:0002991"}


id: PBO:0089151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi nucleoside-diphosphatase Gda1","termid":"PBO:0089151"}


id: PBO:0059396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S30","termid":"PBO:0059396"}


id: GO:0000954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce carboxylic acids with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When methionine is used as the substrate, 3-methylthiopropanoate is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of carboxylic acids, sometimes collectively referred to as fusel acids. Depending on the redox state of the cells, alcohol derivatives may be produced instead of carboxylic acids.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000948"},{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"methionine catabolic process","termid":"GO:0009087"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006790","GO:0006520","GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"methionine catabolic process to 3-methylthiopropanoate","termid":"GO:0000954"}


id: PBO:0030848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_translation","termid":"PBO:0030848"}


id: GO:2000908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucomannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucomannan catabolic process","termid":"GO:2000898"},{"relation_name":"is_a","term_name":"positive regulation of mannan catabolic process","termid":"GO:2000996"},{"relation_name":"positively_regulates","term_name":"glucomannan catabolic process","termid":"GO:2000884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucomannan catabolic process","synonyms":[{"name":"positive regulation of glucomannan catabolism","type":"exact"}],"termid":"GO:2000908"}


id: FYPO:0003121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region such as the sme2 locus.","definition_xrefs":["PMID:24173580","PMID:22582262","PomBase:mah","PMID:23117617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal rate of homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"normal rate of homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"normal rate of homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"normal rate of synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003121"}


id: GO:0031441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mRNA 3'-end processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA 3'-end processing","termid":"GO:0031440"},{"relation_name":"is_a","term_name":"negative regulation of mRNA processing","termid":"GO:0050686"},{"relation_name":"negatively_regulates","term_name":"mRNA 3'-end processing","termid":"GO:0031124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mRNA 3'-end processing","synonyms":[{"name":"down regulation of mRNA 3'-end processing","type":"exact"},{"name":"down-regulation of mRNA 3'-end processing","type":"exact"},{"name":"downregulation of mRNA 3'-end processing","type":"exact"},{"name":"inhibition of mRNA 3'-end processing","type":"narrow"}],"termid":"GO:0031441"}


id: PBO:0067014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 23, pseudogene","termid":"PBO:0067014"}


id: PBO:0067538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 683, pseudogene","termid":"PBO:0067538"}


id: MONDO:0000591
data:
  {"annotated_genes":["SJAG_MIT13","SJAG_01209","SJAG_02536","SJAG_01139","SJAG_04231","SJAG_01671","SJAG_03703","SJAG_00930","SJAG_02611","SJAG_03077","SJAG_00547","SJAG_01181","SJAG_03824","SJAG_MIT03","SJAG_02923","SJAG_01240","SJAG_02785","SJAG_02342","SJAG_00993","SJAG_03145","SJAG_04567","SJAG_02431","SJAG_04621","SJAG_03453","SJAG_01754","SJAG_02919","SJAG_01665","SJAG_MIT15","SJAG_03126","SJAG_03815","SJAG_00228","SJAG_01322","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:8000015"},{"annotations":[85360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014112"},{"annotations":[85362,85363,85361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014113"},{"annotations":[85367,85368,85366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014114"},{"annotations":[86603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032592"},{"annotations":[86886,86885],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030300"},{"annotations":[85888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859358"},{"annotations":[86703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957545"},{"annotations":[86670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030330"},{"annotations":[86029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012557"},{"annotations":[86214,86215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"},{"annotations":[85524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009026"},{"annotations":[86523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012808"},{"annotations":[86793,86794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013198"},{"annotations":[87369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013339"},{"annotations":[85482,85483,85481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014073"},{"annotations":[86503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013261"},{"annotations":[86505,86504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013262"},{"annotations":[86020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012556"},{"annotations":[85563,85564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009290"},{"annotations":[85502,85503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008647"},{"annotations":[86781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012112"},{"annotations":[86543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012799"},{"annotations":[86791,86790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013197"},{"annotations":[85676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010946"},{"annotations":[86786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012111"},{"annotations":[85881,85880,85882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010788"},{"annotations":[87590,87591,87589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[86109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[86979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[86776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[85847,85848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"},{"annotations":[87524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013968"}]},"cv_name":"mondo","definition":"A cardiomyopathy that is due to abnormalities in heart muscle 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cardiomyopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060036"],"synonyms":[{"name":"intrinsic cardiomyopathy","type":"exact"},{"name":"primary 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id: PBO:0038616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiotensin converting enzyme 2","termid":"PBO:0038616"}


id: PR:O94733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC191.01 gene.","definition_xrefs":["UniProtKB:O94733","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C191.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.01","synonyms":[{"name":"Spom972h-SPCC191.01","type":"exact"}],"termid":"PR:O94733"}


id: CHEBI:38338
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminopyrimidine","termid":"CHEBI:38338"}


id: GO:0022626
data:
  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id: GO:0006220
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id: PR:Q9UUD6
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id: PBO:0082027
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id: MOD:01251
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id: GO:0018493
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id: GO:1905010
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id: SO:0001806
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id: FYPO:0002420
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id: PBO:0113761
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id: GO:0045956
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id: MONDO:0003679
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id: PBO:0076834
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TERF1 pseudogene 1","termid":"PBO:0076834"}


id: MONDO:0011632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the MATR3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 21","secondary_identifiers":["GARD:18619","UMLS:C3807521","OMIM:606070","MEDGEN:813851","NCIT:C168755","DOID:0060212"],"synonyms":[{"name":"ALS21","type":"exact"},{"name":"MATR3 amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 21","type":"related"},{"name":"amyotrophic lateral sclerosis caused by mutation in MATR3","type":"exact"},{"name":"amyotrophic lateral sclerosis type 21","type":"exact"},{"name":"myopathy, distal, 2","type":"related"},{"name":"myopathy, distal, 2, formerly","type":"related"},{"name":"vocal cord and pharyngeal dysfunction with distal myopathy","type":"related"},{"name":"vocal cord and pharyngeal dysfunction with distal myopathy, formerly","type":"related"}],"termid":"MONDO:0011632","xrefs":{"Monarch":{"xref_id":"0011632"}}}


id: PBO:0090101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe subcomplex subunit Cut9/Apc6","termid":"PBO:0090101"}


id: GO:0004046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid.","definition_xrefs":["EC:3.5.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aminoacylase activity","secondary_identifiers":["MetaCyc:AMINOACYLASE-RXN","Reactome:R-HSA-5433074","RHEA:15565","Reactome:R-HSA-9638046","Reactome:R-HSA-5579081","Reactome:R-HSA-9753944"],"synonyms":[{"name":"L-amino-acid acylase activity","type":"related"},{"name":"L-aminoacylase activity","type":"related"},{"name":"N-acyl-L-amino-acid amidohydrolase activity","type":"related"},{"name":"acylase I activity","type":"narrow"},{"name":"alpha-N-acylaminoacid hydrolase activity","type":"related"},{"name":"amido acid deacylase activity","type":"related"},{"name":"aminoacylase I activity","type":"narrow"},{"name":"benzamidase activity","type":"related"},{"name":"dehydropeptidase II activity","type":"narrow"},{"name":"hippurase activity","type":"related"},{"name":"histozyme activity","type":"related"},{"name":"long acyl amidoacylase activity","type":"related"},{"name":"short acyl amidoacylase activity","type":"related"}],"termid":"GO:0004046"}


id: GO:0034323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a butyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"butanoyltransferase activity","termid":"GO:0034326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"O-butanoyltransferase activity","termid":"GO:0034323"}


id: FYPO:0008257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a greater extent than normal at long terminal repeat (LTR) regions.","definition_xrefs":["PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K4 acetylation during vegetative growth","termid":"FYPO:0004238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H3-K4 acetylation at LTR during vegetative growth","termid":"FYPO:0008257"}


id: PBO:0091822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf3/6 docking factor","termid":"PBO:0091822"}


id: PBO:0053358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 265","termid":"PBO:0053358"}


id: PBO:0042993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHEK2 pseudogene 6","termid":"PBO:0042993"}


id: GO:0050393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: vinylacetyl-CoA = (2E)-butenoyl-CoA.","definition_xrefs":["RHEA:10572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"vinylacetyl-CoA delta-isomerase activity","secondary_identifiers":["MetaCyc:VINYLACETYL-COA-DELTA-ISOMERASE-RXN","EC:5.3.3.3","KEGG_REACTION:R03031"],"synonyms":[{"name":"delta3-cis-delta2-trans-enoyl-CoA isomerase","type":"broad"},{"name":"vinylacetyl coenzyme A delta-isomerase activity","type":"related"},{"name":"vinylacetyl coenzyme A isomerase activity","type":"related"},{"name":"vinylacetyl-CoA D-isomerase activity","type":"exact"},{"name":"vinylacetyl-CoA delta3-delta2-isomerase activity","type":"related"}],"termid":"GO:0050393"}


id: PBO:0050733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 19","termid":"PBO:0050733"}


id: MONDO:0011528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hyper-IgM syndrome characterized by the absence of immunoglobulin class switch recombination, the lack of immunoglobulin somatic hypermutations, and lymph node hyperplasia caused by the presence of giant germinal centers.","definition_xrefs":["Wikipedia:Hyper-IgM_syndrome_type_2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyper-IgM syndrome","termid":"MONDO:0003947"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0006025"],"is_obsolete":false,"name":"hyper-IgM syndrome type 2","secondary_identifiers":["GARD:10578","DOID:0060758","OMIM:605258","SCTID:403836001","UMLS:C1720956","Orphanet:101089","MEDGEN:354548","NCIT:C129074"],"synonyms":[{"name":"AICDA hyper-IgM syndrome","type":"exact"},{"name":"Activation-induced cytidine deaminase deficiency","type":"exact"},{"name":"HIGM2","type":"exact"},{"name":"activation-induced cytidine deaminase deficiency","type":"exact"},{"name":"aid deficiency","type":"exact"},{"name":"hyper IgM syndrome 2","type":"related"},{"name":"hyper-IgM syndrome 2","type":"related"},{"name":"hyper-IgM syndrome caused by mutation in AICDA","type":"exact"},{"name":"hyper-IgM syndrome type 2","type":"exact"},{"name":"immunodeficiency with hyper IgM type 2","type":"related"},{"name":"immunodeficiency with hyper-IgM type 2","type":"related"},{"name":"immunodeficiency with hyper-IgM, type 2","type":"related"}],"termid":"MONDO:0011528","xrefs":{"Monarch":{"xref_id":"0011528"}}}


id: GO:0050767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neurogenesis, the generation of cells in the nervous system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system development","termid":"GO:0051960"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"neurogenesis","termid":"GO:0022008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neurogenesis","termid":"GO:0050767"}


id: PR:O14450
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prefoldin subunit 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01436","PANTHER:PTHR21431:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.13","secondary_identifiers":["UniProtKB:O14450"],"synonyms":[{"name":"Spom972h-PFDN6","type":"exact"}],"termid":"PR:O14450"}


id: PBO:0007592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA Mue16","termid":"PBO:0007592"}


id: SO:0000404
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A family of RNAs are found as part of the enigmatic vault ribonucleoprotein complex. The complex consists of a major vault protein (MVP), two minor vault proteins (VPARP and TEP1), and several small untranslated RNA molecules. It has been suggested that the vault complex is involved in drug resistance.","direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vault_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Vault_RNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:vault_RNA","type":"exact"},{"name":"vault RNA","type":"exact"}],"termid":"SO:0000404"}


id: PBO:0090513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosyltransferase 34 family","termid":"PBO:0090513"}


id: PR:O94597
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.07","synonyms":[{"name":"Spom972h-SPCC622.07","type":"exact"}],"termid":"PR:O94597"}


id: PBO:0085119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; constituent of 66S pre-ribosomal particles; depletion leads to defects in rRNA processing and a block in the assembly of large ribosomal subunits; possesses a sigma(70)-like RNA-binding motif","termid":"PBO:0085119"}


id: PR:O74754
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit gamma, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02710","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit gamma, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.13","secondary_identifiers":["UniProtKB:O74754"],"synonyms":[{"name":"F-ATPase gamma subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATP5C1","type":"exact"}],"termid":"PR:O74754"}


id: MONDO:0008851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autism (obsolete MONDO:0008851)","termid":"MONDO:0008851","xrefs":{"Monarch":{"xref_id":"0008851"}}}


id: GO:0010224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 280 to 315 nm.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV","termid":"GO:0009411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to UV-B","synonyms":[{"name":"response to UV-B light stimulus","type":"exact"},{"name":"response to UV-B radiation stimulus","type":"exact"},{"name":"response to UVB light stimulus","type":"exact"},{"name":"response to UVB radiation stimulus","type":"exact"},{"name":"response to medium wave ultraviolet light stimulus","type":"exact"},{"name":"response to medium wave ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:0010224"}


id: PBO:0056869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICAL like 2","termid":"PBO:0056869"}


id: GO:0035849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nephric duct grows along its axis. A nephric duct is a tube that drains a primitive kidney.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","PMID:16216236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"nephric duct morphogenesis","termid":"GO:0072178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephric duct elongation","termid":"GO:0035849"}


id: MONDO:0003132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rapidly progressive glomerulonephritis (obsolete MONDO:0003132)","termid":"MONDO:0003132","xrefs":{"Monarch":{"xref_id":"0003132"}}}


id: GO:0032433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The end of a filopodium distal to the body of the cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"filopodium","termid":"GO:0030175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"filopodium tip","termid":"GO:0032433"}


id: GO:0090268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts the inactive process of a mitotic cell cycle spindle assembly checkpoint.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle spindle assembly checkpoint","termid":"GO:0090267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0044772","GO:0000070","GO:0023052"],"is_obsolete":false,"name":"activation of mitotic cell cycle spindle assembly checkpoint","termid":"GO:0090268"}


id: PBO:0026943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-G2-exit_meiosis_with_abolished_premeiotic_DNA_replication","termid":"PBO:0026943"}


id: MONDO:0021155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked form of cone-rod dystrophy.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked cone-rod dystrophy","synonyms":[{"name":"cone-rod dystrophy, X-linked","type":"exact"}],"termid":"MONDO:0021155","xrefs":{"Monarch":{"xref_id":"0021155"}}}


id: PBO:0047115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 162 member B","termid":"PBO:0047115"}


id: PBO:0040379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit OSCP","termid":"PBO:0040379"}


id: GO:0031611
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The subunits of the regulatory particle that directly associate with the core complex of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome regulatory particle, base subcomplex (obsolete GO:0031611)","termid":"GO:0031611"}


id: RO:0002202
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x develops from y if and only if either (a) x directly develops from y or (b) there exists some z such that x directly develops from z and z develops from y","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_preceded_by","termid":"RO:0002258"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"develops_from","termid":"RO:0002202"}


id: PBO:0053517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 507","termid":"PBO:0053517"}


id: MONDO:0030625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dyskinesia with orofacial involvement","termid":"MONDO:0031115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyskinesia with orofacial involvement, autosomal recessive","secondary_identifiers":["MEDGEN:1794246","OMIM:619647","UMLS:C5562036"],"synonyms":[{"name":"DSKOR","type":"exact"},{"name":"dyskinesia with orofacial involvement, autosomal recessive","type":"exact"}],"termid":"MONDO:0030625","xrefs":{"Monarch":{"xref_id":"0030625"}}}


id: PBO:0075510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase complex subunit 2 pseudogene 1","termid":"PBO:0075510"}


id: PBO:0087645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GPI:protein transamidase complex; removes the GPI-anchoring signal and attaches GPI (glycosylphosphatidylinositol) to proteins in the ER; human homolog GPAA1 can complement growth defects of yeast thermosensitive mutant at restrictive temperature","termid":"PBO:0087645"}


id: MONDO:0010055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal muscular atrophy with microcephaly and mental subnormality","secondary_identifiers":["MESH:C564806","OMIM:271110","UMLS:C5935682","MEDGEN:1856346"],"synonyms":[{"name":"spinal muscular atrophy with microcephaly and mental subnormality","type":"exact"}],"termid":"MONDO:0010055","xrefs":{"Monarch":{"xref_id":"0010055"}}}


id: PBO:0070668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 39","termid":"PBO:0070668"}


id: PBO:0060303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 12A","termid":"PBO:0060303"}


id: PBO:0077570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 276","termid":"PBO:0077570"}


id: PBO:0053440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 385","termid":"PBO:0053440"}


id: MONDO:8000011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of chronic intestinal pseudoobstruction caused by a developmental failure of the enteric neurons to differentiate or migrate properly and manifests as a bowel obstruction.","definition_xrefs":["Orphanet:99811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal intestinal dysplasia","termid":"MONDO:0000858"},{"relation_name":"is_a","term_name":"chronic intestinal pseudoobstruction","termid":"MONDO:0017574"},{"relation_name":"is_a","term_name":"visceral neuropathy, familial","termid":"MONDO:0023961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"visceral neuropathy, familial, 1, autosomal recessive","secondary_identifiers":["GARD:3928","MESH:C537394","UMLS:C1855733","DOID:0080679","MEDGEN:340946","OMIM:243180"],"synonyms":[{"name":"Argyrophil myenteric plexus deficiency of","type":"related"},{"name":"Argyrophil myenteric plexus, deficiency of","type":"related"},{"name":"NID A","type":"related"},{"name":"intestinal pseudoobstruction due to neuronal disease","type":"related"},{"name":"neuronal intestinal dysplasia, type a","type":"related"},{"name":"pseudoobstruction chronic idiopathic intestinal neuronal type","type":"related"},{"name":"pseudoobstruction, chronic idiopathic intestinal, neuronal type","type":"related"},{"name":"visceral neuropathy familial","type":"related"},{"name":"visceral neuropathy, familial, autosomal recessive","type":"related"}],"termid":"MONDO:8000011","xrefs":{"Monarch":{"xref_id":"8000011"}}}


id: PBO:0055332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2760","termid":"PBO:0055332"}


id: GO:0046774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that results in the inhibition of interferon activity within the host cell.","definition_xrefs":["PMID:10859382"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host intracellular interferon activity (obsolete GO:0046774)","synonyms":[{"name":"negative regulation by virus of intracellular interferon activity","type":"exact"},{"name":"suppression by virus of intracellular interferon activity in host","type":"exact"}],"termid":"GO:0046774"}


id: MONDO:0011308
data:
  {"annotated_genes":["SJAG_01405"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86282],"is_not":false,"summary":null,"term":"MONDO:0011308"}]},"cv_name":"mondo","definition":"GRACILE syndrome is an inherited lethal mitochondrial disorder characterized by fetal growth restriction (GR), aminoaciduria (A), cholestasis (C), iron overload (I), lactacidosis (L), and early death (E).","definition_xrefs":["Orphanet:53693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"mitochondrial disease","termid":"MONDO:0044970"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01405":null},"genotype_count":0,"is_obsolete":false,"name":"GRACILE syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C537934","GARD:1","ICD9:759.89","SCTID:703388005","OMIM:603358","UMLS:C1864002","DOID:0111455","MEDGEN:400428"],"synonyms":[{"name":"FLNMS","type":"related"},{"name":"Fellman disease","type":"exact"},{"name":"Fellman syndrome","type":"related"},{"name":"Finnish lactic acidosis with hepatic hemosiderosis","type":"related"},{"name":"Finnish lethal neonatal metabolic syndrome","type":"related"},{"name":"Growth delay-aminoaciduria-cholestasis-iron overload-lactic acidosis-early death syndrome","type":"exact"},{"name":"Growth restriction-aminoaciduria-cholestasis-iron overload-lactic acidosis-early death syndrome","type":"exact"},{"name":"Growth retardation, amino aciduria, cholestasis, iron overload, lactic acidosis, and early death","type":"related"},{"name":"Growth retardation, aminoaciduria, cholestasis, iron overload, lactic acidosis and early death","type":"related"},{"name":"gracile syndrome","type":"exact"},{"name":"lactic acidosis, Finnish, with hepatic hemosiderosis","type":"related"}],"termid":"MONDO:0011308","terms_by_termid":{"MONDO:0011308":null},"xrefs":{"Monarch":{"xref_id":"0011308"}}}


id: PBO:0058325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4698","termid":"PBO:0058325"}


id: FYPO:0003882
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of cyclosporin A binding by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased cyclosporin A binding","termid":"FYPO:0003882"}


id: FYPO:0008157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone deacetylation is abnormal at the silent-mating type locus.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone deacetylation during vegetative growth","termid":"FYPO:0000201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone deacetylation at the silent mating-type locus during vegetative growth","termid":"FYPO:0008157"}


id: GO:0031907
data:
  {"annotated_genes":["SJAG_00706","SJAG_02630","SJAG_04823","SJAG_00702","SJAG_02496","SJAG_00326","SJAG_00947"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[118690,71107,105660,112224,112206,115131,116148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005782"}]},"cv_name":"cellular_component","definition":"The volume enclosed by the membranes of a microbody.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"microbody","termid":"GO:0042579"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00706":null,"SJAG_00947":null,"SJAG_02496":null,"SJAG_02630":null,"SJAG_04823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"microbody lumen","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031907","terms_by_termid":{"GO:0005782":null}}


id: PATO:0001708
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an bearer by virtue of the bearer's extension in one dimension.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-D extent","synonyms":[{"name":"1-D size","type":"exact"}],"termid":"PATO:0001708"}


id: MOD:01389
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-isoleucine residue to form L-isoleucine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:11320328","RESID:AA0466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-isoleucine residue","termid":"MOD:02049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-isoleucine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S,2S)-1-amino-2-methylbutyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-zanyl-2-methylbutyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Ile-Cys)","type":"exact"},{"name":"L-isoleucine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01389"}


id: PBO:0053921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1218","termid":"PBO:0053921"}


id: PR:O14321
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol 24-C-methyltransferase erg6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.05","synonyms":[{"name":"Spom972h-erg6","type":"exact"},{"name":"delta(24)-sterol C-methyltransferase erg6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ergosterol biosynthesis protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14321"}


id: MONDO:0008398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salivary substance, Clostridium botulinum type","secondary_identifiers":["MEDGEN:356679","OMIM:180950","UMLS:C1867056"],"synonyms":[{"name":"salivary substance, Clostridium botulinum type","type":"exact"}],"termid":"MONDO:0008398","xrefs":{"Monarch":{"xref_id":"0008398"}}}


id: PR:Q9Y7S9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aah3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7S9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.02c","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aah3","type":"exact"}],"termid":"PR:Q9Y7S9"}


id: MOD:00199
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to a D-allo-isoleucine.","definition_xrefs":["RESID:AA0192","ChEBI:30007","PubMed:8223491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-allo-isoleucine","synonyms":[{"name":"(2R,3S)-2-amino-3-methylpentanoic acid","type":"exact"},{"name":"2-azanyl-3-methylpentanoic acid","type":"exact"},{"name":"3-methyl-norvaline","type":"exact"},{"name":"D-Ile","type":"exact"},{"name":"D-allo-isoleucine","type":"exact"},{"name":"D-threo-isoleucine","type":"exact"},{"name":"MOD_RES D-allo-isoleucine","type":"exact"},{"name":"allo-D-isoleucine","type":"exact"},{"name":"alpha-amino-beta-methylvaleric acid","type":"exact"}],"termid":"MOD:00199"}


id: SO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Base sequence at the 3' end of a tRNA. The 3'-hydroxyl group on the terminal adenosine is the attachment point for the amino acid.","definition_xrefs":["ISBN:0716719207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCA_tail","synonyms":[{"name":"CCA sequence","type":"exact"},{"name":"CCA tail","type":"exact"}],"termid":"SO:0001175"}


id: MONDO:0009424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bartter syndrome in which the cause of the disease is a mutation in the KCNJ1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bartter syndrome","termid":"MONDO:0015231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Bartter disease type 2","secondary_identifiers":["OMIM:241200","MESH:C537651","UMLS:C1855849","DOID:0110143","SCTID:700109009","MEDGEN:343428","GARD:22483","Orphanet:620220"],"synonyms":[{"name":"BARTS2","type":"exact"},{"name":"Bartter disease type 2","type":"exact"},{"name":"Bartter syndrome antenatal type 2","type":"related"},{"name":"Bartter syndrome caused by mutation in KCNJ1","type":"exact"},{"name":"Bartter syndrome type 2","type":"exact"},{"name":"Bartter syndrome type 2 antenatal","type":"exact"},{"name":"Bartter syndrome, antenatal, type 2","type":"related"},{"name":"Bartter syndrome, type 2","type":"exact"},{"name":"Bartter syndrome, type 2, antenatal","type":"related"},{"name":"KCNJ1 Bartter syndrome","type":"exact"},{"name":"hyperprostaglandin E syndrome 2","type":"exact"},{"name":"hypokalemic alkalosis with hypercalciuria 2 antenatal","type":"exact"},{"name":"hypokalemic alkalosis with hypercalciuria 2, antenatal","type":"related"},{"name":"hypokalemic alkalosis with hypercalciuria antenatal 2","type":"related"},{"name":"hypokalemic alkalosis with hypercalciuria, antenatal, 2","type":"related"}],"termid":"MONDO:0009424","xrefs":{"Monarch":{"xref_id":"0009424"}}}


id: PBO:0053285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA inflammatory and mucous response associated, antisense to ICAM1","termid":"PBO:0053285"}


id: MONDO:0005241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adrenocortical carcinoma (obsolete MONDO:0005241)","synonyms":[{"name":"obsolete adrenocortical carcinoma (disease)","type":"exact"}],"termid":"MONDO:0005241","xrefs":{"Monarch":{"xref_id":"0005241"}}}


id: GO:0030077
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane protein-pigment complex that may be closely or peripherally associated to photosynthetic reaction centers that participate in harvesting and transferring radiant energy to the reaction center. Examples of this complex are found in bacterial species.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"light-harvesting complex","termid":"GO:0030076"},{"relation_name":"part_of","term_name":"cytoplasmic vesicle","termid":"GO:0031410"},{"relation_name":"part_of","term_name":"plasma membrane-derived chromatophore","termid":"GO:0042716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"plasma membrane light-harvesting complex","termid":"GO:0030077"}


id: MONDO:0957231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte/zygote/embryo maturation arrest 19","secondary_identifiers":["MEDGEN:1841078","UMLS:C5830442","OMIM:620333"],"termid":"MONDO:0957231","xrefs":{"Monarch":{"xref_id":"0957231"}}}


id: PBO:0083977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosidase II beta subunit, forms a complex with alpha subunit Rot2p; involved in removal of two glucose residues from N-linked glycans during glycoprotein biogenesis in the ER; relocalizes from ER to cytoplasm upon DNA replication stress","termid":"PBO:0083977"}


id: PR:P40901
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asc-type amino acid transporter 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual differentiation process putative amino-acid permease isp5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.09","secondary_identifiers":["UniProtKB:P40901"],"synonyms":[{"name":"Spom972h-SLC7A10","type":"exact"}],"termid":"PR:P40901"}


id: PBO:0073120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine dehydratase like","termid":"PBO:0073120"}


id: MONDO:0009578
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85798],"is_not":false,"summary":null,"term":"MONDO:0009578"}]},"cv_name":"mondo","definition":"Neurocutaneous melanocytosis (NCM) is a rare congenital neurological disorder characterized by abnormal aggregations of nevomelanocytes within the central nervous system (leptomeningeal melanocytosis) associated with large or giant congenital melanocytic nevi (CMN). NCM can be asymptomatic or present as variably severe and progressive neurological impairment, sometimes resulting in death.","definition_xrefs":["Orphanet:2481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system benign neoplasm","termid":"MONDO:0000648"},{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"neurocutaneous syndrome","termid":"MONDO:0042983"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"neurocutaneous melanocytosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:7186","OMIM:249400","UMLS:C0544862","MEDGEN:154259","NCIT:C175215","icd11.foundation:403221860","NANDO:2200827","MESH:C537387"],"synonyms":[{"name":"NCM","type":"exact"},{"name":"NCMS","type":"related"},{"name":"Neuromelanosis","type":"related"},{"name":"melanosis, neurocutaneous","type":"related"},{"name":"neurocutaneous melanosis","type":"exact"},{"name":"neurocutaneous melanosis syndrome","type":"related"},{"name":"neurocutaneous melanosis, somatic","type":"exact"}],"termid":"MONDO:0009578","terms_by_termid":{"MONDO:0009578":null},"xrefs":{"Monarch":{"xref_id":"0009578"}}}


id: PBO:0082160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenosine 5'-monophosphoramidase; interacts physically and genetically with Kin28p, a CDK and TFIIK subunit, and genetically with CAK1; member of histidine triad (HIT) superfamily of nucleotide-binding proteins; protein abundance increases in response to DNA replication stress; human homolog HINT1 can complement yeast hnt1 mutant","termid":"PBO:0082160"}


id: FYPO:0008056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a poly(A)-specific ribonuclease activity is absent.","definition_xrefs":["PMID:19307292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished ribonuclease activity","termid":"FYPO:0006301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"abolished poly(A)-specific ribonuclease activity","termid":"FYPO:0008056"}


id: PBO:0087225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Second largest subunit of DNA polymerase II (DNA polymerase epsilon); required for maintenance of fidelity of chromosomal replication; essential motif in C-terminus is required for formation of the four-subunit Pol epsilon; expression peaks at the G1/S phase boundary; Cdc28p substrate","termid":"PBO:0087225"}


id: GO:0018553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-(2,3-dihydroxyphenyl)propionate + O2 = 2-hydroxy-6-keto-nona-2,4-dienedioate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-(2,3-dihydroxyphenyl)propionate 1,2-dioxygenase activity (obsolete GO:0018553)","termid":"GO:0018553"}


id: PBO:0003879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CGI-48 family (predicted)","termid":"PBO:0003879"}


id: FYPO:0004683
data:
  {"alleles_by_uniquename":{"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119560,119801],"is_not":false,"summary":null,"term":"FYPO:0004683"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the nucleolus is partitioned to daughter cells unequally during cell division.","definition_xrefs":["PMID:16478992","PomBase:mah","PMID:1661641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03449":null,"SJAG_03575":null},"genotype_count":2,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"unequal nucleolus inheritance","references_by_uniquename":{"PMID:23786411":null,"PMID:24184107":null},"single_locus_annotated_genes":["SJAG_03575","SJAG_03449"],"single_locus_genotype_uniquenames":["man1delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"unequal mitotic nucleolar partitioning","type":"exact"},{"name":"unequal mitotic nucleolar segregation","type":"exact"},{"name":"unequal nucleolar inheritance","type":"exact"},{"name":"unequal nucleolus distribution","type":"exact"},{"name":"unequal nucleolus inheritance during mitotic cell cycle","type":"related"},{"name":"unequal nucleolus inheritance during vegetative growth","type":"exact"},{"name":"unequal nucleolus partitioning","type":"exact"},{"name":"unequal nucleolus segregation","type":"exact"},{"name":"unequal rDNA segregation","type":"related"}],"termid":"FYPO:0004683","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0004683":null}}


id: PBO:0060089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 36","termid":"PBO:0060089"}


id: PR:Q09700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gep3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2F7.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.09c","synonyms":[{"name":"Spom972h-gep3","type":"exact"}],"termid":"PR:Q09700"}


id: MONDO:0008365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recombinant 8 (rec(8)) syndrome, also known as San Luis Valley syndrome, is a complex chromosomal disorder that is due to a parental pericentric inversion of chromosome 8 and is characterized by major congenital heart anomalies, urogenital malformations, moderate to severe intellectual deficiency and mild craniofacial dysmorphism.","definition_xrefs":["Orphanet:96167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombinant 8 syndrome","secondary_identifiers":["OMIM:179613","UMLS:C0795822","MESH:C535296","SCTID:718189004","GARD:9698","MEDGEN:167070"],"synonyms":[{"name":"Duplication 8q/deletion 8p","type":"exact"},{"name":"RECOMBINANT chromosome 8 syndrome","type":"related"},{"name":"Rec(8) syndrome","type":"exact"},{"name":"Rec8 syndrome","type":"exact"},{"name":"Recombinant chromosome 8 syndrome","type":"exact"},{"name":"San Luis Valley recombinant chromosome 8 syndrome","type":"related"},{"name":"San Luis Valley syndrome","type":"exact"},{"name":"chromosome 8Q22.1-qter Duplication and 8Pter-p23.1 deletion","type":"related"}],"termid":"MONDO:0008365","xrefs":{"Monarch":{"xref_id":"0008365"}}}


id: GO:0039621
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=13 symmetry. The T=13 capsid is composed of 12 pentameric and 120 hexameric capsomeres.","definition_xrefs":["VZ:260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=13 icosahedral viral capsid","termid":"GO:0039621"}


id: MONDO:0018955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recurrent respiratory papillomatosis is a rare respiratory disease characterized by the development of exophytic papillomas, affecting the mucosa of the upper aero-digestive tract (with a strong predilection for the larynx), caused by an infection with human papilloma virus. Symptoms at presentation may include hoarseness, chronic cough, dyspnea, recurrent upper respiratory infections, pneumonia, dysphagia, stridor, and/or failure to thrive.","definition_xrefs":["Orphanet:60032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"papillomatosis","termid":"MONDO:0021098"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recurrent respiratory papillomatosis","secondary_identifiers":["ICD9:078.19","icd11.foundation:151039887","MEDGEN:216998","NORD:1651","MedDRA:10059314","MESH:C535297","SCTID:472827002","GARD:111","NCIT:C128637","UMLS:C1168198"],"synonyms":[{"name":"AORRP (type)","type":"related"},{"name":"JORRP (type)","type":"related"},{"name":"RRP","type":"exact"},{"name":"adult-onset recurrent respiratory papillomatosis (type)","type":"related"},{"name":"juvenile laryngeal papilloma","type":"related"},{"name":"juvenile-onset recurrent respiratory papillomatosis (type)","type":"related"},{"name":"laryngeal papilloma, recurrent","type":"related"},{"name":"recurrent respiratory papillomatosis","type":"exact"},{"name":"respiratory papillomatosis, recurrent","type":"related"}],"termid":"MONDO:0018955","xrefs":{"Monarch":{"xref_id":"0018955"}}}


id: MONDO:0019990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-amyloid fibrillary glomerulopathy (non-amyloid FGP) is a rare cause of glomerulonephritis (GN) characterized by glomerular accumulation of non-amyloid fibrils in the mesangium and the glomerular (and rarely tubular) basement membrane, that mainly presents with renal insufficiency, micro-hematuria and nephrotic range proteinuria. Non-amyloid FGP and immunotactoid glomerulopathy (ITG) are often grouped together as pathogenetically related diseases.","definition_xrefs":["Orphanet:97566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunotactoid or fibrillary glomerulopathy","termid":"MONDO:0019605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"non-amyloid fibrillary glomerulopathy","secondary_identifiers":["MEDGEN:907201","SCTID:718192000","UMLS:C4273674","GARD:12740","NORD:2024"],"synonyms":[{"name":"Congo red-negative amyloidosis-like glomerulopathy","type":"exact"},{"name":"Fibrillary Glomerulonephritis ","type":"exact"},{"name":"fibrillary glomerulonephritis","type":"related"},{"name":"non-amyloid fibrillary glomerulonephritis","type":"exact"}],"termid":"MONDO:0019990","xrefs":{"Monarch":{"xref_id":"0019990"}}}


id: GO:0002790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a peptide from a cell or a tissue.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"},{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"peptide secretion","termid":"GO:0002790"}


id: PATO:0000928
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000928 absolute photosensitivity (obsolete PATO:0000928)","termid":"PATO:0000928"}


id: PATO:0001116
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001116 relative impulse value (obsolete PATO:0001116)","termid":"PATO:0001116"}


id: PBO:0058095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4311","termid":"PBO:0058095"}


id: GO:0000953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce carboxylic acids with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When a branched chain family amino acid, leucine, isoleucine, or valine, is used as the substrate, 3-methylbutanoate, 2-methylbutanoate, or 2-methylpropanoate, respectively, is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of carboxylic acids, sometimes collectively referred to as fusel acids. Depending on the redox state of the cells, alcohol derivatives may be produced instead of carboxylic acids.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000948"},{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"branched-chain amino acid catabolic process to carboxylic acid via Ehrlich pathway","synonyms":[{"name":"branched chain family amino acid catabolic process to carboxylic acid via Ehrlich pathway","type":"exact"}],"termid":"GO:0000953"}


id: PBO:0034570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology_during_meiotic_cell_cycle","termid":"PBO:0034570"}


id: PBO:0074391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 2","termid":"PBO:0074391"}


id: MONDO:0013598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myostatin-related muscle hypertrophy is a rare condition characterized by reduced body fat and increased muscle size. Affected individuals have up to twice the usual amount of muscle mass in their bodies. They also tend to have increased muscle strength. This condition is not known to cause any medical problems, and affected individuals are intellectually normal. Myostatin-related muscle hypertrophy is caused by mutations in the MSTN gene. It follows an incomplete autosomal dominant pattern of inheritance.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"muscle tissue disorder","termid":"MONDO:0003939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myostatin-related muscle hypertrophy","secondary_identifiers":["SCTID:699185005","MESH:C536106","DOID:0111072","ICD9:756.89","Orphanet:275534","UMLS:C2931112","OMIM:614160","MEDGEN:418994","HGNC:4223"],"synonyms":[{"name":"MSLHP","type":"exact"},{"name":"muscle hypertrophy","type":"related"}],"termid":"MONDO:0013598","xrefs":{"Monarch":{"xref_id":"0013598"}}}


id: MONDO:0011001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Brugada syndrome in which the cause of the disease is a mutation in the SCN5A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Brugada syndrome","termid":"MONDO:0015263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Brugada syndrome 1","secondary_identifiers":["UMLS:C4551804","MEDGEN:1646402","DOID:0110218","OMIM:601144"],"synonyms":[{"name":"BRGDA1","type":"exact"},{"name":"Brugada syndrome 1","type":"exact"},{"name":"Brugada syndrome caused by mutation in SCN5A","type":"exact"},{"name":"Brugada syndrome type 1","type":"exact"},{"name":"Cardiac conduction defect, nonspecific","type":"related"},{"name":"SCN5A Brugada syndrome","type":"exact"},{"name":"right bundle branch block, St segment elevation, and sudden death syndrome","type":"related"},{"name":"sudden unexplained nocturnal death syndrome","type":"related"}],"termid":"MONDO:0011001","xrefs":{"Monarch":{"xref_id":"0011001"}}}


id: PBO:0063668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-GPI attachment to proteins 6","termid":"PBO:0063668"}


id: GO:0007608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive an olfactory stimulus, convert it to a molecular signal, and recognize and characterize the signal. Olfaction involves the detection of chemical composition of an organism's ambient medium by chemoreceptors. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of chemical stimulus","termid":"GO:0007606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of smell","secondary_identifiers":["Wikipedia:Olfaction"],"synonyms":[{"name":"olfaction","type":"exact"},{"name":"scent perception","type":"exact"},{"name":"sense of smell","type":"exact"},{"name":"smell perception","type":"exact"}],"termid":"GO:0007608"}


id: PBO:0041689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding and coiled-coil domain 2","termid":"PBO:0041689"}


id: PBO:0043734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 13","termid":"PBO:0043734"}


id: GO:0075245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of oospore formation, a process in which male and female gametangia develop and fuse to form a thick-walled resting spore of oomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043941"},{"relation_name":"is_a","term_name":"regulation of oospore formation","termid":"GO:0075244"},{"relation_name":"positively_regulates","term_name":"oospore formation","termid":"GO:0075243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of oospore formation","termid":"GO:0075245"}


id: FYPO:0003624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues of one or more specific proteins is decreased during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation during cellular response to heat (obsolete FYPO:0003624)","synonyms":[{"name":"decreased protein threonine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased protein threonine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"reduced protein threonine phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0003624"}


id: PBO:0050492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B2","termid":"PBO:0050492"}


id: MONDO:1011724
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunodeficiency disease, non-human animal","secondary_identifiers":["OMIA:000550"],"termid":"MONDO:1011724","xrefs":{"Monarch":{"xref_id":"1011724"}}}


id: FYPO:0003161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is too low to detect. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"RNA absent from cell","termid":"FYPO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"RNA absent from cell during vegetative growth","secondary_identifiers":["FYPO:0004509"],"synonyms":[{"name":"RNA absent from cell during mitotic cell cycle","type":"related"},{"name":"mRNA absent from cell","type":"narrow"},{"name":"mRNA absent from cell during mitotic cell cycle","type":"related"},{"name":"mRNA absent from cell during vegetative growth","type":"narrow"},{"name":"mRNA transcripts absent from cell","type":"narrow"},{"name":"messenger RNA absent from cell","type":"narrow"},{"name":"transcripts absent from cell during vegetative growth","type":"exact"},{"name":"undetectable RNA level during vegetative growth","type":"exact"},{"name":"undetectable mRNA level","type":"narrow"}],"termid":"FYPO:0003161"}


id: GO:2000114
data:
  {"annotated_genes":["SJAG_00845","SJAG_01373","SJAG_00317","SJAG_04522","SJAG_03126","SJAG_02536","SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94916,112344],"is_not":false,"summary":null,"term":"GO:2000114"},{"annotations":[91289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904846"},{"annotations":[104041,112856,107974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061173"},{"annotations":[107975,116975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000784"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of cell polarity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity","termid":"GO:0032878"},{"relation_name":"regulates","term_name":"establishment of cell polarity","termid":"GO:0030010"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00317":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_02536":null,"SJAG_03126":null,"SJAG_03581":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"regulation of establishment of cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of bud site selection/establishment of cell polarity","type":"related"},{"name":"regulation of cell polarization","type":"exact"}],"termid":"GO:2000114","terms_by_termid":{"GO:0061173":null,"GO:1904846":null,"GO:2000114":null,"GO:2000784":null}}


id: PBO:0042400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 6","termid":"PBO:0042400"}


id: GO:0044498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of the force with which blood travels through the circulatory system of the bitten/stung organism.","definition_xrefs":["PMID:19837656","GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete venom-mediated perturbation of blood pressure in another organism (obsolete GO:0044498)","synonyms":[{"name":"envenomation resulting in modulation of blood pressure in another organism","type":"exact"},{"name":"envenomation resulting in modulation of blood pressure in other organism","type":"exact"},{"name":"envenomation resulting in regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044498"}


id: PBO:0046723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ecotropic viral integration site 2A","termid":"PBO:0046723"}


id: GO:0010702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of the breakdown of tissues; usually, if not always, accompanied by cell death.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histolysis (obsolete GO:0010702)","termid":"GO:0010702"}


id: PBO:0033787
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_large-Y_replication_intermediates","termid":"PBO:0033787"}


id: PBO:0057725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR1302-9 host gene","termid":"PBO:0057725"}


id: PBO:0001478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"up-frameshift suppressor 3 family protein (predicted)","termid":"PBO:0001478"}


id: MONDO:0024255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic skin disease (obsolete MONDO:0024255)","termid":"MONDO:0024255","xrefs":{"Monarch":{"xref_id":"0024255"}}}


id: MONDO:0013554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any psoriasis in which the cause of the disease is a mutation in the TRAF3IP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 13, susceptibility to","secondary_identifiers":["OMIM:614070","DOID:0111287","UMLS:C3279754","MEDGEN:481384"],"synonyms":[{"name":"PSORS13","type":"related"},{"name":"TRAF3IP2 psoriasis","type":"exact"},{"name":"psoriasis 13, susceptibility to","type":"exact"},{"name":"psoriasis caused by mutation in TRAF3IP2","type":"exact"},{"name":"psoriasis susceptibility 13","type":"exact"},{"name":"susceptibility to psoriasis 13","type":"related"}],"termid":"MONDO:0013554","xrefs":{"Monarch":{"xref_id":"0013554"}}}


id: GO:0000718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of the oligonucleotide that contains the DNA damage. The oligonucleotide is formed by dual incisions that flank the site of DNA damage.","definition_xrefs":["PMID:10197977","GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide-excision repair, DNA damage removal (obsolete GO:0000718)","termid":"GO:0000718"}


id: MONDO:0000123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete factor V and Factor VIII, combined deficiency of (obsolete MONDO:0000123)","termid":"MONDO:0000123","xrefs":{"Monarch":{"xref_id":"0000123"}}}


id: GO:0018256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a formyl group to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acylation","termid":"GO:0043543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein formylation","synonyms":[{"name":"protein amino acid formylation","type":"exact"}],"termid":"GO:0018256"}


id: PBO:0040204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astacin like metalloendopeptidase","termid":"PBO:0040204"}


id: MONDO:0042717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Saul-Wilkes-Stevenson syndrome","secondary_identifiers":["MEDGEN:419372","MESH:C536617","UMLS:C2931266"],"synonyms":[{"name":"Saul Wilkes Stevenson syndrome","type":"related"}],"termid":"MONDO:0042717","xrefs":{"Monarch":{"xref_id":"0042717"}}}


id: MONDO:0008048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited neuromuscular disorder defined by numerous centrally placed nuclei on muscle biopsy and clinical features of a congenital myopathy.","definition_xrefs":["Orphanet:169189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"congenital structural myopathy","termid":"MONDO:0002921"},{"relation_name":"is_a","term_name":"centronuclear myopathy","termid":"MONDO:0018947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005336"],"is_obsolete":false,"name":"autosomal dominant centronuclear myopathy","secondary_identifiers":["UMLS:C4551952","OMIM:160150","GARD:12719","DOID:0111223","DOID:0111217","NCIT:C126689","OMIM:614408","MEDGEN:1645741","SCTID:716696006"],"synonyms":[{"name":"AD-CNM","type":"exact"},{"name":"CNM1","type":"exact"},{"name":"CNM3","type":"related"},{"name":"DNM2-related centronuclear myopathy","type":"related"},{"name":"autosomal dominant centronuclear myopathy","type":"exact"},{"name":"autosomal dominant centronuclear myopathy caused by mutation in MYF6","type":"exact"},{"name":"centronuclear myopathy 1","type":"exact"},{"name":"centronuclear myopathy, autosomal dominant","type":"exact"},{"name":"centronuclear myopathy, autosomal, modifier of","type":"exact"},{"name":"myopathy, centronuclear, 1","type":"exact"},{"name":"myopathy, centronuclear, 3","type":"exact"},{"name":"myopathy, centronuclear, autosomal dominant","type":"exact"},{"name":"myopathy, centronuclear, type 1","type":"exact"},{"name":"myopathy, centronuclear, type 3","type":"exact"},{"name":"myotubular myopathy, autosomal dominant","type":"exact"}],"termid":"MONDO:0008048","xrefs":{"Monarch":{"xref_id":"0008048"}}}


id: PBO:0043943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptochrome circadian regulator 2","termid":"PBO:0043943"}


id: PBO:0043009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer hallmarks in lung lncRNA 1","termid":"PBO:0043009"}


id: GO:1990666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of the serine protease PCSK9 (proprotein convertase subtilisin/kexin-9) and a low-density lipoprotein receptor (LDLR). Interaction typically occurs through the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR, and complex formation promotes degradation of the LDLR through the endosome/lysosome pathway.","definition_xrefs":["PMID:18250299","PMID:24440079","GOC:BHF","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PCSK9-LDLR complex","synonyms":[{"name":"PCSK9.LDLR complex","type":"exact"},{"name":"PCSK9/LDL-R complex","type":"exact"},{"name":"PCSK9:EGF-A complex","type":"related"},{"name":"PCSK9:low-density lipoprotein receptor complex","type":"exact"}],"termid":"GO:1990666"}


id: GO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of a series of septin structures that are localized in the bud neck of a budding fungal cell during the cell cycle.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cellular bud neck","termid":"GO:0005935"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cellular bud neck septin structure","termid":"GO:0000399"}


id: PBO:0081371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 209, pseudogene","termid":"PBO:0081371"}


id: GO:0071690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the myosin-based thick filaments of myofibrils in cardiac muscle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle myosin thick filament assembly","termid":"GO:0071688"},{"relation_name":"part_of","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0044085","GO:0065003","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"cardiac muscle myosin thick filament assembly","termid":"GO:0071690"}


id: SO:0000525
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one VJ-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VJ_J_cluster","synonyms":[{"name":"V VJ J cluster","type":"exact"},{"name":"V-(VJ)-J-CLUSTER","type":"exact"}],"termid":"SO:0000525"}


id: GO:0042300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3-epoxysqualene = beta-amyrin.","definition_xrefs":["PMID:9746369","RHEA:31007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"beta-amyrin synthase activity","secondary_identifiers":["EC:5.4.99.39","MetaCyc:RXN-7570"],"synonyms":[{"name":"2,3-oxidosqualene beta-amyrin cyclase","type":"exact"},{"name":"oxidosqualene:beta-amyrin cyclase activity","type":"exact"}],"termid":"GO:0042300"}


id: MONDO:0017087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"neurenteric cyst","secondary_identifiers":["icd11.foundation:172158971","Orphanet:268865","MEDGEN:14343","GARD:20975","UMLS:C0027806"],"termid":"MONDO:0017087","xrefs":{"Monarch":{"xref_id":"0017087"}}}


id: MONDO:0012657
data:
  {"annotated_genes":["SJAG_01067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85824],"is_not":false,"summary":null,"term":"MONDO:0012657"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01067":null},"genotype_count":0,"is_obsolete":false,"name":"Mungan syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:369554","OMIM:611376","MESH:C548078","UMLS:C1969653"],"synonyms":[{"name":"MGS","type":"exact"},{"name":"MUNGAN syndrome","type":"exact"},{"name":"pseudoobstruction chronic idiopathic intestinal with Barrett esophagus and cardiac abnormalities","type":"related"},{"name":"pseudoobstruction chronic idiopathic intestinal with Barrett oesophagus and cardiac abnormalities","type":"related"},{"name":"pseudoobstruction, chronic idiopathic intestinal, with Barrett esophagus and Cardiac abnormalities","type":"related"},{"name":"pseudoobstruction, chronic idiopathic intestinal, with Barrett oesophagus and Cardiac abnormalities","type":"related"},{"name":"visceral Neuromyopathy, familial, with pseudoobstruction, Megaduodenum, Barrett esophagus, and Cardiac abnormalities","type":"related"},{"name":"visceral neuromyopathy familial with pseudoobstruction megaduodenum Barrett esophagus and cardiac abnormalities","type":"related"},{"name":"visceral neuromyopathy familial with pseudoobstruction megaduodenum Barrett oesophagus and cardiac abnormalities","type":"related"}],"termid":"MONDO:0012657","terms_by_termid":{"MONDO:0012657":null},"xrefs":{"Monarch":{"xref_id":"0012657"}}}


id: GO:0052688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-isopropenyl-6-oxoheptanoate + CoA-SH + ATP = H2O + AMP + diphosphate + (3R)-3-isopropenyl-6-oxoheptanoyl-CoA.","definition_xrefs":["KEGG_REACTION:R06515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"(3R)-3-isopropenyl-6-oxoheptanoate:CoA ligase (AMP-forming) activity","synonyms":[{"name":"3-isopropenyl-6-oxoheptanoyl-CoA synthetase activity","type":"broad"}],"termid":"GO:0052688"}


id: PBO:0058413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4782","termid":"PBO:0058413"}


id: GO:0072492
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the host cell mitochondrial envelope.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host cell mitochondrial envelope","termid":"GO:0044190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell mitochondrial intermembrane space","termid":"GO:0072492"}


id: GO:0044417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a molecule(s) produced by an organism to a location inside its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc","PMID:18406478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with host","termid":"GO:0051701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"translocation of molecules into host","secondary_identifiers":["GO:0051836"],"synonyms":[{"name":"translocation of molecules into other organism during symbiotic interaction","type":"broad"},{"name":"translocation of molecules into other organism involved in symbiotic interaction","type":"broad"},{"name":"transport of molecules into host","type":"exact"},{"name":"transport of molecules into other organism during symbiotic interaction","type":"broad"}],"termid":"GO:0044417"}


id: PBO:0109830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-stranded telomeric binding protein Tcg1","termid":"PBO:0109830"}


id: MONDO:0042966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of mitral valve disease that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve disorder","termid":"MONDO:0003767"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"inherited mitral valve disease","secondary_identifiers":["SCTID:75372006","UMLS:C0265845","MEDGEN:539532"],"synonyms":[{"name":"congenital anomaly of mitral valve","type":"exact"},{"name":"congenital malformation of mitral valve","type":"related"},{"name":"congenital mitral valve abnormality","type":"related"},{"name":"hereditary mitral valve disease","type":"exact"}],"termid":"MONDO:0042966","xrefs":{"Monarch":{"xref_id":"0042966"}}}


id: GO:1900485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein targeting to vacuolar membrane.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein targeting to membrane","termid":"GO:0090314"},{"relation_name":"is_a","term_name":"positive regulation of intracellular protein transport","termid":"GO:0090316"},{"relation_name":"is_a","term_name":"regulation of protein targeting to vacuolar membrane","termid":"GO:1900483"},{"relation_name":"is_a","term_name":"positive regulation of vacuolar transport","termid":"GO:1903337"},{"relation_name":"positively_regulates","term_name":"protein targeting to vacuolar membrane","termid":"GO:0044395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0006605"],"is_obsolete":false,"name":"positive regulation of protein targeting to vacuolar membrane","synonyms":[{"name":"activation of protein targeting to vacuolar membrane","type":"narrow"},{"name":"up regulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"up-regulation of protein targeting to vacuolar membrane","type":"exact"},{"name":"upregulation of protein targeting to vacuolar membrane","type":"exact"}],"termid":"GO:1900485"}


id: GO:0043834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Co(I)-[trimethylamine-specific corrinoid protein] + H+ + trimethylamine = dimethylamine + methyl-Co(III)-[trimethylamine-specific corrinoid protein].","definition_xrefs":["PMID:9006042","RHEA:39287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"trimethylamine methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8102","EC:2.1.1.250"],"synonyms":[{"name":"MT1","type":"broad"},{"name":"TMA methyltransferase 1","type":"exact"},{"name":"mttB1","type":"related"},{"name":"trimethylamine-specific methylcobalamin:coenzyme M methyltransferase activity","type":"narrow"},{"name":"trimethylamine:corrinoid methyltransferase activity","type":"exact"}],"termid":"GO:0043834"}


id: PBO:0063290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 4","termid":"PBO:0063290"}


id: FYPO:0007916
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of  dihydrosphingosine-1-phosphate (DHS-1P) measured in a cell is higher than normal.","definition_xrefs":["PMID:35008733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular dihydrosphingosine-1-phosphate level","synonyms":[{"name":"increased cellular level of DHS-1P","type":"exact"}],"termid":"FYPO:0007916"}


id: GO:0018290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron and molybdenum into a Mo-7Fe-8S iron-molybdenum-sulfur cluster via L-cysteinyl homocitryl molybdenum-heptairon-nonasulfide, found in nitrogenase.","definition_xrefs":["RESID:AA0141"],"gene_count":0,"genotype_count":0,"name":"obsolete iron and molybdenum incorporation into iron-molybdenum-sulfur cluster via L-cysteinyl homocitryl molybdenum-heptairon-nonasulfide (obsolete GO:0018290)","synonyms":[{"name":"iron and molybdenum incorporation into iron-molybdenum-sulphur cluster via L-cysteinyl homocitryl molybdenum-heptairon-nonasulphide","type":"exact"}],"termid":"GO:0018290"}


id: GO:0102421
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: curcumin 4'-O-beta-D-gentiobioside + UDP-alpha-D-glucose = curcumin 4'-O-beta-D-gentiotrioside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete curcumin-4'-O-beta-D-gentiobioside 1,6-glucosyltransferase activity (obsolete GO:0102421)","termid":"GO:0102421"}


id: GO:0098645
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A supramolecular complex that consists of collagen triple helices associated to form a network.","definition_xrefs":["GOC:dos","PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex of collagen trimers","termid":"GO:0098644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"collagen network","termid":"GO:0098645"}


id: PBO:0059807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 33","termid":"PBO:0059807"}


id: GO:0018686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 6-hydroxypseudooxynicotine + O2 = 2 2,6-dihydroxypseudooxynicotine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-hydroxy pseudo-oxynicotine monooxygenase activity (obsolete GO:0018686)","termid":"GO:0018686"}


id: GO:0048724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the epistomal sclerite over time, from its formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epistomal sclerite development","termid":"GO:0048724"}


id: MONDO:1010225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cystic hygroma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm, non-human animal","termid":"MONDO:0700098"},{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"},{"relation_name":"is_a","term_name":"lymphoid system disorder, non-human animal","termid":"MONDO:1011330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystic hygroma, non-human animal","secondary_identifiers":["OMIA:002369"],"termid":"MONDO:1010225","xrefs":{"Monarch":{"xref_id":"1010225"}}}


id: MONDO:0014209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Early-onset progressive neurodegeneration-blindness-ataxia-spasticity syndrome is a genetic neurodegenerative disease characterized by normal early development followed by childhood onset optic atrophy with progressive vision loss and eventually blindness, followed by progressive neurological decline that typically includes cerebellar ataxia, nystagmus, dorsal column dysfunction (decreased vibration and position sense), spastic paraplegia and finally tetraparesis.","definition_xrefs":["Orphanet:352654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"early-onset progressive neurodegeneration-blindness-ataxia-spasticity syndrome","secondary_identifiers":["UMLS:C3809665","OMIM:615491","DOID:0112344","GARD:17523","MEDGEN:815995"],"synonyms":[{"name":"NDGOA","type":"related"},{"name":"SPG79","type":"related"},{"name":"neurodegeneration with optic atrophy, childhood-onset","type":"related"},{"name":"spastic paraplegia 79, autosomal recessive","type":"related"}],"termid":"MONDO:0014209","xrefs":{"Monarch":{"xref_id":"0014209"}}}


id: PBO:0003953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine aminopeptidase Fma2 (predicted)","termid":"PBO:0003953"}


id: FYPO:0001879
data:
  {"alleles_by_uniquename":{"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119517,119524,119518],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0001877"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has a smaller diameter (thickness; width) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"abnormal cell size","termid":"FYPO:0001127"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_03581":null,"SJAG_04280":null},"genotype_count":3,"genotypes_by_uniquename":{"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc2-1w(G146D aa)","display_uniquename":"cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03048:allele-1","expression":"Not assayed or wild type"}]}]},"gef1delta":{"display_name":"gef1delta","display_uniquename":"gef1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03581:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"thin cell","references_by_uniquename":{"PMID:30664646":null},"single_locus_annotated_genes":["SJAG_04280","SJAG_03581","SJAG_03048"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","gef1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"decreased cell diameter","type":"exact"},{"name":"decreased cell thickness","type":"exact"},{"name":"decreased cell width","type":"exact"}],"termid":"FYPO:0001879","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000338":null,"FYPO:0001877":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PATO:0002337
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting a continuous convex surface with an axis of symmetry and one axis longer than the other; characterized with an egg-shaped form crossed with a lance-head shaped form.","definition_xrefs":["PATOC:DD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lanceolate","termid":"PATO:0001877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lance-ovate","termid":"PATO:0002337"}


id: GO:0009072
data:
  {"annotated_genes":["SJAG_00337","SJAG_02734","SJAG_04747","SJAG_01346","SJAG_03055","SJAG_04842","SJAG_03743","SJAG_02505","SJAG_03580","SJAG_01455","SJAG_03312","SJAG_03485","SJAG_02400","SJAG_03775","SJAG_00224","SJAG_02408","SJAG_05007","SJAG_00518","SJAG_00592","SJAG_04652","SJAG_03124","SJAG_00248","SJAG_01137","SJAG_03167"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008153"},{"annotations":[72999,77272,60145,75366,78656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009073"},{"annotations":[77015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009074"},{"annotations":[71564,71919,74234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[60037,76187,78774,76943,64511,80633,71523,57898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000105"},{"annotations":[98674,78258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[73651,77545,79565,74593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[79111,77014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00224":null,"SJAG_00248":null,"SJAG_00337":null,"SJAG_00518":null,"SJAG_00592":null,"SJAG_01137":null,"SJAG_01346":null,"SJAG_01455":null,"SJAG_02400":null,"SJAG_02408":null,"SJAG_02505":null,"SJAG_02734":null,"SJAG_03055":null,"SJAG_03124":null,"SJAG_03167":null,"SJAG_03312":null,"SJAG_03485":null,"SJAG_03580":null,"SJAG_03743":null,"SJAG_03775":null,"SJAG_04652":null,"SJAG_04747":null,"SJAG_04842":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aromatic amino acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8963691"],"synonyms":[{"name":"aromatic amino acid family metabolic process","type":"exact"},{"name":"aromatic amino acid family metabolism","type":"exact"}],"termid":"GO:0009072","terms_by_termid":{"GO:0000105":null,"GO:0000162":null,"GO:0000949":null,"GO:0006571":null,"GO:0008153":null,"GO:0009073":null,"GO:0009074":null,"GO:0009094":null}}


id: PBO:0035837
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_deubiquitination_following_cellular_response_to_methyl_methanesulfonate_during_vegetative_growth","termid":"PBO:0035837"}


id: MONDO:0003197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma characterized by the presence of malignant epithelial cells with granular cytoplasm.","definition_xrefs":["NCIT:C3681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granular cell cancer","termid":"MONDO:0003252"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"granular cell carcinoma","secondary_identifiers":["ICDO:8320/3","DOID:4903","MEDGEN:104695","UMLS:C0205644"],"synonyms":[{"name":"granular cell adenocarcinoma","type":"exact"},{"name":"granular cell carcinoma","type":"exact"},{"name":"granular cell carcinoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003197","xrefs":{"Monarch":{"xref_id":"0003197"}}}


id: FYPO:0009041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of 2,2′-dipyridyl than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to 2,2′-dipyridyl","synonyms":[{"name":"resistance to 2,2′-dipyridyl during mitotic cell cycle","type":"related"},{"name":"resistance to 2,2′-dipyridyl during vegetative growth","type":"exact"},{"name":"resistant to 2,2′-dipyridyl","type":"exact"}],"termid":"FYPO:0009041"}


id: FYPO:0001311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which plasmids are lost at a lower frequency than normal. Plasmid loss occurs when one or both daughter cells do not inherit copies of a plasmid from the mother cell, and may result from failure of plasmid replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased plasmid loss","synonyms":[{"name":"decreased plasmid loss during mitotic cell cycle","type":"related"},{"name":"decreased plasmid loss during vegetative growth","type":"exact"},{"name":"reduced plasmid loss","type":"exact"}],"termid":"FYPO:0001311"}


id: PBO:0043989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colony stimulating factor 3","termid":"PBO:0043989"}


id: GO:0050022
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinose + NAD+ = L-arabinono-1,4-lactone + NADH.","definition_xrefs":["MetaCyc:L-ARABINOSE-1-DEHYDROGENASE-RXN","EC:1.1.1.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"L-arabinose 1-dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:17925"],"synonyms":[{"name":"L-arabinose 1-dehydrogenase activity","type":"broad"},{"name":"L-arabinose:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0050022"}


id: PBO:0089276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent protein kinase Pho85/PhoA-like Pef1","termid":"PBO:0089276"}


id: PBO:0004764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mago-nashi homolog (predicted)","termid":"PBO:0004764"}


id: GO:0031599
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The regulatory subcomplex of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome regulatory particle (obsolete GO:0031599)","termid":"GO:0031599"}


id: GO:0006354
data:
  {"annotated_genes":["SJAG_00483","SJAG_01713","SJAG_04933","SJAG_01610","SJAG_03211","SJAG_00540","SJAG_01444","SJAG_01151","SJAG_02393","SJAG_00119","SJAG_02319","SJAG_03128","SJAG_00293","SJAG_00320","SJAG_00913","SJAG_01213","SJAG_03144","SJAG_03006","SJAG_04353","SJAG_04261","SJAG_02871","SJAG_01948","SJAG_01698","SJAG_03118","SJAG_03481","SJAG_01765","SJAG_00925","SJAG_04038","SJAG_02691","SJAG_02416","SJAG_04670","SJAG_02057","SJAG_03944","SJAG_00139","SJAG_02698","SJAG_01313","SJAG_00914","SJAG_01149","SJAG_02873","SJAG_01562","SJAG_02238","SJAG_02653","SJAG_02101","SJAG_03967","SJAG_02097","SJAG_02314","SJAG_04257","SJAG_03578","SJAG_00150","SJAG_01128","SJAG_03956","SJAG_02070","SJAG_00731","SJAG_01707","SJAG_04106","SJAG_03061"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79307],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001193"},{"annotations":[118329],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0034244"},{"annotations":[80107,70664],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0032786"},{"annotations":[117388,78414,71924,71381,106407,79917],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0032968"},{"annotations":[111054,77867,92364,103684,114601,106152,90705,115917,70423,105240,74925,113520,103025,95548,113898,75530,113899,114185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006362"},{"annotations":[107189,113569,92976,108061,92304,95549,111857,100271,114456,114783,99480,105860,94276,108253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006368"},{"annotations":[94943,119247,111651,117293,91568,113989,93720,109145,92709,109150,116599,95816,103906,90389,114929],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140673"}]},"cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at a DNA-dependent RNA polymerase promoter by the addition of ribonucleotides catalyzed by an RNA polymerase.","definition_xrefs":["GOC:txnOH","PMID:15020047","GOC:mah","PMID:18280161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00119":null,"SJAG_00139":null,"SJAG_00150":null,"SJAG_00293":null,"SJAG_00320":null,"SJAG_00483":null,"SJAG_00540":null,"SJAG_00731":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_01128":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01213":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01610":null,"SJAG_01698":null,"SJAG_01707":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_01948":null,"SJAG_02057":null,"SJAG_02070":null,"SJAG_02097":null,"SJAG_02101":null,"SJAG_02238":null,"SJAG_02314":null,"SJAG_02319":null,"SJAG_02393":null,"SJAG_02416":null,"SJAG_02653":null,"SJAG_02691":null,"SJAG_02698":null,"SJAG_02871":null,"SJAG_02873":null,"SJAG_03006":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03128":null,"SJAG_03144":null,"SJAG_03211":null,"SJAG_03481":null,"SJAG_03578":null,"SJAG_03944":null,"SJAG_03956":null,"SJAG_03967":null,"SJAG_04038":null,"SJAG_04106":null,"SJAG_04257":null,"SJAG_04261":null,"SJAG_04353":null,"SJAG_04670":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"DNA-templated transcription elongation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001124"],"synonyms":[{"name":"DNA-dependent transcription, elongation","type":"exact"},{"name":"DNA-templated transcription, elongation","type":"exact"},{"name":"RNA elongation","type":"broad"},{"name":"RNA elongation from bacterial-type RNA polymerase promoter","type":"narrow"},{"name":"transcription elongation from bacterial-type RNA polymerase promoter","type":"narrow"},{"name":"transcription elongation, DNA-dependent","type":"exact"},{"name":"transcriptional elongation, DNA-dependent","type":"exact"}],"termid":"GO:0006354","terms_by_termid":{"GO:0001193":null,"GO:0006362":null,"GO:0006368":null,"GO:0032786":null,"GO:0032968":null,"GO:0034244":null,"GO:0140673":null}}


id: GO:0030839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of intermediate filaments by the addition of monomers to a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein polymerization","termid":"GO:0032271"},{"relation_name":"is_a","term_name":"regulation of intermediate filament polymerization or depolymerization","termid":"GO:0045108"},{"relation_name":"regulates","term_name":"intermediate filament polymerization","termid":"GO:0045107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of intermediate filament polymerization","termid":"GO:0030839"}


id: MONDO:0017725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Tay-Sachs disease","termid":"MONDO:0010100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005244","MONDO:0005328","MONDO:0002525","MONDO:0002039","MONDO:0002561","MONDO:0005559"],"is_obsolete":false,"name":"Tay-Sachs disease, b variant, juvenile form","secondary_identifiers":["MEDGEN:1863740","UMLS:C5925030","Orphanet:309185","SCTID:238022009","GARD:21325"],"synonyms":[{"name":"GM2 gangliosidosis, B variant, juvenile form","type":"exact"},{"name":"hexosaminidase A deficiency, juvenile form","type":"exact"}],"termid":"MONDO:0017725","xrefs":{"Monarch":{"xref_id":"0017725"}}}


id: MONDO:0008085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neuropathy, hereditary sensorimotor, with upper motor neuron, visual pathway and autonomic disturbance (obsolete MONDO:0008085)","secondary_identifiers":["OMIM:162380","MESH:C563517"],"synonyms":[{"name":"neuropathy, hereditary sensorimotor, with upper motor neuron, visual pathway and autonomic disturbance","type":"exact"}],"termid":"MONDO:0008085","xrefs":{"Monarch":{"xref_id":"0008085"}}}


id: PBO:0067392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 497, pseudogene","termid":"PBO:0067392"}


id: GO:0098670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a virion attaches to a host cell by binding to a receptor on the host cell surface that mediates/triggers viral entry by endocytosis/pinocytosis or by inducing fusion/penetration.","definition_xrefs":["VZ:3942","PMID:18351291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated virion attachment to host cell","termid":"GO:0046813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry receptor-mediated virion attachment to host cell","synonyms":[{"name":"viral attachment to host entry receptor","type":"exact"}],"termid":"GO:0098670"}


id: PBO:0076349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 15","termid":"PBO:0076349"}


id: FYPO:0004173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to heat","synonyms":[{"name":"decreased protein phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to heat stress","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0004173"}


id: GO:0046062
data:
  {"annotated_genes":["SJAG_02874","SJAG_00885","SJAG_04665"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95822,92767,107618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dCDP, deoxycytidine 5'-diphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009196"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dCDP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dCDP metabolism","type":"exact"}],"termid":"GO:0046062","terms_by_termid":{"GO:0006240":null}}


id: PBO:0041981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 25","termid":"PBO:0041981"}


id: GO:0042072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cell adhesion receptor inhibitor activity (obsolete GO:0042072)","synonyms":[{"name":"cell adhesion receptor inhibitor activity","type":"exact"}],"termid":"GO:0042072"}


id: PATO:0001730
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to shed body parts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shedability","termid":"PATO:0001729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deciduous (generic)","termid":"PATO:0001730"}


id: GO:0160064
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that mediates the insertion of multi-pass transmembrane proteins into endoplasmic reticulum (ER) membrane. Substrates enter via the lateral gate of the Sec61 translocon. The complex comprises the GEL subcomplex (composed of RAB5IF/OPTI and TMCO1), the BOS subcomplex (composed of NCLN/Nicalin, NOMO and TMEM147) and the PAT subcomplex (composed of WDR83OS/Asterix and CCDC47).","definition_xrefs":["PMID:36261528","PMID:36261522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER membrane insertion complex","termid":"GO:0072379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005829","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"multi-pass translocon complex","synonyms":[{"name":"MPT complex","type":"exact"},{"name":"TMCO1 translocon","type":"related"}],"termid":"GO:0160064"}


id: GO:1901739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myoblast fusion.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:21364645","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060142"},{"relation_name":"regulates","term_name":"myoblast fusion","termid":"GO:0007520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myoblast fusion","termid":"GO:1901739"}


id: MONDO:0060702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, di rocco type","secondary_identifiers":["UMLS:C4693799","MEDGEN:1646454","OMIM:617974"],"synonyms":[{"name":"SEMDDR","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, Di Rocco type","type":"related"}],"termid":"MONDO:0060702","xrefs":{"Monarch":{"xref_id":"0060702"}}}


id: GO:1903231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A translation repressor activity that acts by base-pairing with an mRNA. The binding can result in targeting the mRNA for degradation or interfering with mRNA translation, hence resulting in posttranscriptional gene silencing.","definition_xrefs":["PMID:20533884","GOC:BHF","PMID:18197166","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific mRNA binding","termid":"GO:1990825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"mRNA base-pairing post-transcriptional repressor activity","secondary_identifiers":["GO:0150100"],"synonyms":[{"name":"RNA binding involved in PTGS","type":"broad"},{"name":"RNA binding involved in cosuppression","type":"broad"},{"name":"RNA binding involved in post-transcriptional gene silencing","type":"broad"},{"name":"RNA binding involved in posttranscriptional gene silencing","type":"broad"},{"name":"RNA binding involved in quelling","type":"broad"},{"name":"mRNA base-pairing posttranscriptional repressor activity","type":"exact"},{"name":"mRNA base-pairing translational repressor activity","type":"narrow"},{"name":"mRNA binding involved in PTGS","type":"exact"},{"name":"mRNA binding involved in cosuppression","type":"related"},{"name":"mRNA binding involved in post-transcriptional gene silencing","type":"exact"},{"name":"mRNA binding involved in posttranscriptional gene silencing","type":"exact"},{"name":"mRNA binding involved in quelling","type":"exact"},{"name":"mRNA binding translation repressor activity","type":"broad"},{"name":"translational inhibitor activity via mRNA base-pairing","type":"exact"}],"termid":"GO:1903231"}


id: FYPO:0002125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane","termid":"FYPO:0004838"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery during vegetative growth","termid":"FYPO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to plasma membrane during vegetative growth","synonyms":[{"name":"abnormal protein localisation to plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal protein localization in plasma membrane during vegetative growth","type":"exact"},{"name":"abnormal protein localization to plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002125"}


id: PBO:0089143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPRY domain membrane protein, specificity factor required for ubiquitination Ear1","termid":"PBO:0089143"}


id: PATO:0000287
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000287 absolute litter size (obsolete PATO:0000287)","termid":"PATO:0000287"}


id: GO:0005353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fructose from one side of a membrane to the other. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"fructose transmembrane transporter activity","secondary_identifiers":["GO:0015585","GO:0019192","Reactome:R-HSA-189222"],"synonyms":[{"name":"fructose permease activity","type":"exact"},{"name":"fructose porter activity","type":"exact"}],"termid":"GO:0005353"}


id: PBO:0081694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 616","termid":"PBO:0081694"}


id: GO:0004452
data:
  {"annotated_genes":["SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75059],"is_not":false,"summary":null,"term":"GO:0004452"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isopentenyl diphosphate = dimethylallyl diphosphate.","definition_xrefs":["RHEA:23284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"isopentenyl-diphosphate delta-isomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R01123","MetaCyc:IPPISOM-RXN","Reactome:R-HSA-191382","EC:5.3.3.2"],"synonyms":[{"name":"IPP isomerase activity","type":"related"},{"name":"isopentenyl-diphosphate D-isomerase activity","type":"exact"},{"name":"isopentenyl-diphosphate delta3-delta2-isomerase activity","type":"related"},{"name":"isopentenylpyrophosphate delta-isomerase activity","type":"related"},{"name":"isopentenylpyrophosphate isomerase activity","type":"related"},{"name":"methylbutenylpyrophosphate isomerase activity","type":"related"}],"termid":"GO:0004452","terms_by_termid":{"GO:0004452":null}}


id: MONDO:0044749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked congenital stationary night blindness (XLCSNB) is a disorder of the retina. People with this condition typically experience night blindness and other vision problems, including loss of sharpness (reduced visual acuity), severe nearsightedness (myopia), nystagmus,and strabismus. Color vision is typically not affected. These vision problems are usually evident at birth, but tend to be stable (stationary) over time. There aretwo major types of XLCSNB: the complete form and the incomplete form. Bothtypes have very similar signs and symptoms. However, everyone with the complete form has night blindness, while not all people with the incomplete form have night blindness. The types are distinguished by their genetic cause.","definition_xrefs":["GARD:0003995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"X-linked congenital stationary night blindness","secondary_identifiers":["GARD:3995"],"synonyms":[{"name":"X-linked CSNB","type":"exact"},{"name":"XLCSNB","type":"exact"},{"name":"congenital stationary night blindness, X-linked","type":"exact"}],"termid":"MONDO:0044749","xrefs":{"Monarch":{"xref_id":"0044749"}}}


id: GO:0070125
data:
  {"annotated_genes":["SJAG_03461","SJAG_02353","SJAG_04351","SJAG_05271"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73902,80315,80487,92315],"is_not":false,"summary":null,"term":"GO:0070125"}]},"cv_name":"biological_process","definition":"The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis in a mitochondrion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational elongation","termid":"GO:0006414"},{"relation_name":"part_of","term_name":"mitochondrial translation","termid":"GO:0032543"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02353":null,"SJAG_03461":null,"SJAG_04351":null,"SJAG_05271":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0010467"],"is_obsolete":false,"name":"mitochondrial translational elongation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5389840"],"synonyms":[{"name":"mitochondrial translation elongation","type":"exact"}],"termid":"GO:0070125","terms_by_termid":{"GO:0070125":null}}


id: GO:1903238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of leukocyte tethering or rolling.","definition_xrefs":["GOC:als","PMID:18308860","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte tethering or rolling","termid":"GO:1903236"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904996"},{"relation_name":"positively_regulates","term_name":"leukocyte tethering or rolling","termid":"GO:0050901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of leukocyte tethering or rolling","synonyms":[{"name":"activation of leukocyte tethering or rolling","type":"narrow"},{"name":"up regulation of leukocyte tethering or rolling","type":"exact"},{"name":"up-regulation of leukocyte tethering or rolling","type":"exact"},{"name":"upregulation of leukocyte tethering or rolling","type":"exact"}],"termid":"GO:1903238"}


id: MONDO:0022676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cataract - glaucoma (obsolete MONDO:0022676)","termid":"MONDO:0022676","xrefs":{"Monarch":{"xref_id":"0022676"}}}


id: PBO:0028803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_replication_fork_arrest_at_mating-type_locus","termid":"PBO:0028803"}


