# terms

id: PBO:0074013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 4","termid":"PBO:0074013"}


id: GO:0097232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a lamellar body. A lamellar body is a membrane-bounded organelle, specialized for the storage and secretion of various substances (surfactant phospholipids, glycoproteins and acid phosphates) which are arranged in the form of tightly packed, concentric, membrane sheets or lamellae. Has some similar properties to, but is distinct from, a lysosome.","definition_xrefs":["PMID:11940594","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"lamellar body","termid":"GO:0042599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"lamellar body membrane","termid":"GO:0097232"}


id: MONDO:0009179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe generalized recessive dystrophic epidermolysis bullosa (RDEB-sev gen) is the most severe subtype of dystrophic epidermolysis bullosa (DEB), formerly known as the Hallopeau-Siemens type, and is characterized by generalized cutaneous and mucosal blistering and scarring associated with severe deformities and major extracutaneous involvement.","definition_xrefs":["Orphanet:79408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"recessive dystrophic epidermolysis bullosa","secondary_identifiers":["OMIM:226600","SCTID:48528004","UMLS:C0079474","ICD9:757.39","MEDGEN:36311","NANDO:1200238","NANDO:2201383","DOID:0060642","GARD:6308"],"synonyms":[{"name":"EBD inversa","type":"exact"},{"name":"RDEB","type":"related"},{"name":"RDEB generalisata gravis","type":"exact"},{"name":"RDEB, Hallopeau-Siemens type","type":"exact"},{"name":"RDEB, severe generalised","type":"related"},{"name":"RDEB, severe generalized","type":"related"},{"name":"RDEB-sev gen","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa generalisata gravis","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa, Hallopeau-Siemens type","type":"exact"},{"name":"autosomal recessive dystrophic epidermolysis bullosa, Hallopeau-Siemens type (formerly)","type":"related"},{"name":"dystrophic epidermolysis bullosa, autosomal recessive","type":"related"},{"name":"epidermolysis bullosa dystrophica inversa, autosomal recessive","type":"related"},{"name":"epidermolysis bullosa dystrophica, AR","type":"exact"},{"name":"epidermolysis bullosa dystrophica, Hallopeau-Siemens type","type":"related"},{"name":"epidermolysis bullosa dystrophica, autosomal recessive","type":"related"},{"name":"epidermolysis bullosa dystrophica, autosomal recessive, Localisata variant","type":"related"},{"name":"epidermolysis bullosa dystrophica, autosomal recessive, modifier of","type":"exact"},{"name":"epidermolysis bullosa dystrophica, generalised severe, autosomal recessive","type":"related"},{"name":"epidermolysis bullosa dystrophica, generalized severe, autosomal recessive","type":"related"},{"name":"recessive dystrophic epidermolysis bullosa, severe generalised","type":"related"},{"name":"recessive dystrophic epidermolysis bullosa, severe generalized","type":"related"},{"name":"severe generalised RDEB","type":"narrow"},{"name":"severe generalised recessive dystrophic epidermolysis bullosa","type":"narrow"},{"name":"severe generalized RDEB","type":"narrow"},{"name":"severe generalized recessive dystrophic epidermolysis bullosa","type":"narrow"}],"termid":"MONDO:0009179","xrefs":{"Monarch":{"xref_id":"0009179"}}}


id: _global:is_measurement_of
data:
  {"annotation_feature_type":"gene","cv_name":"pato.ontology","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_measurement_of","termid":"_global:is_measurement_of"}


id: PBO:0111805
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase kinase 3 (GSK-3) subfamily","termid":"PBO:0111805"}


id: MONDO:0017670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant diffuse mutilating palmoplantar keratoderma (obsolete MONDO:0017670)","secondary_identifiers":["Orphanet:307773"],"synonyms":[{"name":"autosomal dominant diffuse mutilating palmoplantar hyperkeratosis","type":"exact"}],"termid":"MONDO:0017670","xrefs":{"Monarch":{"xref_id":"0017670"}}}


id: GO:0048381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the lateral mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm structural organization","termid":"GO:0048338"},{"relation_name":"part_of","term_name":"lateral mesoderm morphogenesis","termid":"GO:0048369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesoderm structural organization","synonyms":[{"name":"lateral mesoderm structural organisation","type":"exact"},{"name":"lateral plate mesoderm structural organization","type":"exact"}],"termid":"GO:0048381"}


id: PBO:0071237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 78","termid":"PBO:0071237"}


id: GO:0061584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of orexin from a cell or a tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion","termid":"GO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"orexin secretion","synonyms":[{"name":"hypocretin secretion","type":"exact"}],"termid":"GO:0061584"}


id: GO:1902984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any pre-replicative complex assembly involved in meiotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-replicative complex assembly involved in nuclear cell cycle DNA replication","termid":"GO:0006267"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"premeiotic DNA replication","termid":"GO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0065003","GO:0008150","GO:0006259","GO:0044085","GO:0006260"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in premeiotic DNA replication","synonyms":[{"name":"nuclear pre-replicative complex assembly involved in meiotic cell cycle","type":"exact"},{"name":"pre-RC complex assembly involved in meiosis","type":"broad"},{"name":"pre-replicative complex assembly involved in meiosis","type":"broad"},{"name":"pre-replicative complex assembly involved in meiotic cell cycle DNA replication","type":"exact"},{"name":"pre-replicative complex formation involved in meiosis","type":"broad"}],"termid":"GO:1902984"}


id: PBO:0003920
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds M-box 5'-ACAAT-3'","termid":"PBO:0003920"}


id: GO:0006058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a mannoprotein, a protein that contains covalently bound mannose residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannoprotein metabolic process","termid":"GO:0006056"},{"relation_name":"is_a","term_name":"glycoprotein catabolic process","termid":"GO:0006516"},{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"mannoprotein catabolic process","synonyms":[{"name":"mannoprotein breakdown","type":"exact"},{"name":"mannoprotein catabolism","type":"exact"},{"name":"mannoprotein degradation","type":"exact"}],"termid":"GO:0006058"}


id: PBO:0088964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Noc1","termid":"PBO:0088964"}


id: PBO:0088919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT and tudor domain DNA checkpoint protein Crb2","termid":"PBO:0088919"}


id: GO:0016458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process carried out at the cellular level that results in either long-term transcriptional repression via action on chromatin structure or RNA mediated, post-transcriptional repression of gene expression.","definition_xrefs":["GOC:tb","GOC:dph","GOC:dos","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete gene silencing (obsolete GO:0016458)","secondary_identifiers":["Wikipedia:Gene_silencing"],"termid":"GO:0016458"}


id: PBO:0073933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 17 member 6","termid":"PBO:0073933"}


id: MONDO:0018259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"didymosis aplasticosebacea","secondary_identifiers":["GARD:21591","Orphanet:370046","MEDGEN:1650408","UMLS:C4751600"],"synonyms":[{"name":"aplasia cutis congenita-nevus sebaceus syndrome","type":"exact"}],"termid":"MONDO:0018259","xrefs":{"Monarch":{"xref_id":"0018259"}}}


id: GO:0018012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The trimethylation of the N-terminal alanine of proteins to form the derivative peptidyl-N,N,N-trimethyl-L-alanine.","definition_xrefs":["RESID:AA0062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-alanine methylation","termid":"GO:0018011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-alanine trimethylation","termid":"GO:0018012"}


id: PBO:0084858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; required for mitochondrial genome integrity, respiratory growth, and mitochondrial redox homeostasis, partially overlaps verified gene YPR099C","termid":"PBO:0084858"}


id: GO:1900152
data:
  {"annotated_genes":["SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.","definition_xrefs":["GOC:mcc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","termid":"GO:1900151"},{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"},{"relation_name":"negatively_regulates","term_name":"nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","termid":"GO:0000288"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"down regulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"down regulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"down regulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"down regulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"down regulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"down regulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"down regulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"down regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"down-regulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"down-regulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"down-regulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"down-regulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"down-regulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"down-regulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"down-regulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"down-regulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"down-regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"downregulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"downregulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"downregulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"downregulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"downregulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"downregulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"downregulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"downregulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"downregulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","type":"exact"},{"name":"inhibition of deadenylation-dependent mRNA decay","type":"narrow"},{"name":"inhibition of mRNA breakdown, deadenylation-dependent decay","type":"narrow"},{"name":"inhibition of mRNA catabolic process, deadenylation-dependent","type":"narrow"},{"name":"inhibition of mRNA catabolic process, deadenylylation-dependent","type":"narrow"},{"name":"inhibition of mRNA catabolism, deadenylation-dependent","type":"narrow"},{"name":"inhibition of mRNA catabolism, deadenylylation-dependent","type":"narrow"},{"name":"inhibition of mRNA degradation, deadenylation-dependent decay","type":"narrow"},{"name":"inhibition of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"narrow"},{"name":"inhibition of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay","type":"narrow"},{"name":"negative regulation of deadenylation-dependent mRNA decay","type":"exact"},{"name":"negative regulation of mRNA breakdown, deadenylation-dependent decay","type":"exact"},{"name":"negative regulation of mRNA catabolic process, deadenylation-dependent","type":"exact"},{"name":"negative regulation of mRNA catabolic process, deadenylylation-dependent","type":"exact"},{"name":"negative regulation of mRNA catabolism, deadenylation-dependent","type":"exact"},{"name":"negative regulation of mRNA catabolism, deadenylylation-dependent","type":"exact"},{"name":"negative regulation of mRNA degradation, deadenylation-dependent decay","type":"exact"},{"name":"negative regulation of nuclear mRNA catabolic process, deadenylation-dependent decay","type":"exact"}],"termid":"GO:1900152","terms_by_termid":{"GO:0060212":null}}


id: PBO:0082259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Amidase; removes the amide group from N-terminal asparagine and glutamine residues to generate proteins with N-terminal aspartate and glutamate residues that are targets of ubiquitin-mediated degradation","termid":"PBO:0082259"}


id: MONDO:0001375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the trigone of urinary bladder.","direct_ancestors":[{"relation_name":"is_a","term_name":"bladder dome cancer","termid":"MONDO:0001380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder trigone cancer","secondary_identifiers":["MEDGEN:635606","UMLS:C0496826","DOID:11813","SCTID:188239000","ICD9:188.0"],"synonyms":[{"name":"cancer of trigone of urinary bladder","type":"exact"},{"name":"malignant neoplasm of trigone of urinary bladder","type":"exact"},{"name":"malignant trigone of urinary bladder neoplasm","type":"exact"},{"name":"trigone of urinary bladder cancer","type":"exact"}],"termid":"MONDO:0001375","xrefs":{"Monarch":{"xref_id":"0001375"}}}


id: FYPO:0008289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a guanyl-nucleotide exchange factor activity is abnormal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal guanyl-nucleotide exchange factor activity","synonyms":[{"name":"abnormal GEF activity","type":"exact"}],"termid":"FYPO:0008289"}


id: PBO:0088354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate kinase/IP8 pyrophosphatase","termid":"PBO:0088354"}


id: GO:0016172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Inhibits the growth and recrystallization of ice crystals, thereby lowering the freezing point of water and preventing cellular damage at subzero temperatures. This activity is observed in various cold-adapted organisms, including certain fish, insects, and plants, and contributes to survival in extreme cold environments by stabilizing supercooled liquid states.","definition_xrefs":["GOC:cjm","PMID:33317024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ice binding","termid":"GO:0050825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"antifreeze activity","termid":"GO:0016172"}


id: PBO:0000578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family","termid":"PBO:0000578"}


id: PBO:0069568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 840, pseudogene","termid":"PBO:0069568"}


id: MONDO:0003971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the pylorus.","definition_xrefs":["NCIT:C6795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastric pylorus carcinoma","secondary_identifiers":["UMLS:C1333787","MEDGEN:234301","DOID:6703"],"synonyms":[{"name":"cancer of gastric pylorus","type":"exact"},{"name":"cancer of pylorus of stomach","type":"exact"},{"name":"cancer of the gastric pylorus","type":"exact"},{"name":"cancer of the pylorus of the stomach","type":"exact"},{"name":"carcinoma of gastric pylorus","type":"exact"},{"name":"carcinoma of pylorus of stomach","type":"exact"},{"name":"carcinoma of the gastric pylorus","type":"exact"},{"name":"carcinoma of the pylorus of the stomach","type":"exact"},{"name":"gastric pylorus (stomach) cancer","type":"exact"},{"name":"gastric pylorus cancer","type":"exact"},{"name":"gastric pylorus carcinoma","type":"exact"}],"termid":"MONDO:0003971","xrefs":{"Monarch":{"xref_id":"0003971"}}}


id: PBO:0071407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 13","termid":"PBO:0071407"}


id: PBO:0013022
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human DHODH","termid":"PBO:0013022"}


id: PBO:0043803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexin 3","termid":"PBO:0043803"}


id: GO:0046258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene, a highly explosive pale yellow crystalline solid, in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic 2,4,6-trinitrotoluene metabolic process","termid":"GO:0018975"},{"relation_name":"is_a","term_name":"2,4,6-trinitrotoluene catabolic process","termid":"GO:0046256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic 2,4,6-trinitrotoluene catabolic process","synonyms":[{"name":"anaerobic 2,4,6-trinitrotoluene breakdown","type":"exact"},{"name":"anaerobic 2,4,6-trinitrotoluene catabolism","type":"exact"},{"name":"anaerobic 2,4,6-trinitrotoluene degradation","type":"exact"}],"termid":"GO:0046258"}


id: MONDO:0001786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine inflammatory disease","secondary_identifiers":["DOID:13736","MEDGEN:541692","ICD9:615.9","UMLS:C0269047","EFO:0009572","SCTID:28783002"],"synonyms":[{"name":"inflammatory disease of the uterus","type":"exact"}],"termid":"MONDO:0001786","xrefs":{"Monarch":{"xref_id":"0001786"}}}


id: PBO:0091249
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-One, Three-Galactosyltransferase","termid":"PBO:0091249"}


id: GO:0009827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events leading to chemical and structural alterations of an existing cellulose and pectin-containing cell wall that can result in loosening, increased extensibility or disassembly. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:lr","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall organization","termid":"GO:0009664"},{"relation_name":"is_a","term_name":"cell wall modification","termid":"GO:0042545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"plant-type cell wall modification","synonyms":[{"name":"cellulose and pectin-containing cell wall modification","type":"exact"}],"termid":"GO:0009827"}


id: PBO:0002641
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.71","termid":"PBO:0002641"}


id: GO:2000223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of BMP signaling pathway involved in heart jogging.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of BMP signaling pathway involved in heart jogging (obsolete GO:2000223)","synonyms":[{"name":"regulation of BMP signalling pathway involved in heart jogging pathway involved in somitogenesis","type":"exact"}],"termid":"GO:2000223"}


id: GO:0006928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed, self-propelled movement of a cell or subcellular component without the involvement of an external agent such as a transporter or a pore.","definition_xrefs":["GOC:dph","GOC:jl","GOC:dgh","GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete movement of cell or subcellular component (obsolete GO:0006928)","synonyms":[{"name":"cell movement","type":"related"},{"name":"cellular component motion","type":"exact"},{"name":"cellular component movement","type":"exact"}],"termid":"GO:0006928"}


id: PBO:0051296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-27 (pseudogene)","termid":"PBO:0051296"}


id: PBO:0068731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 2, pseudogene","termid":"PBO:0068731"}


id: GO:0005230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"extracellular ligand-gated monoatomic ion channel activity","synonyms":[{"name":"extracellular ligand-gated ion channel activity","type":"broad"}],"termid":"GO:0005230"}


id: GO:0009869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction between a pollen grain and pistil that results in inhibition of pollen germination/growth.","definition_xrefs":["PMID:10375566"],"gene_count":0,"genotype_count":0,"name":"obsolete incompatible pollen-pistil interaction (obsolete GO:0009869)","synonyms":[{"name":"incompatible pollen-pistil interaction","type":"exact"}],"termid":"GO:0009869"}


id: PBO:0071251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 92","termid":"PBO:0071251"}


id: GO:0002883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of hypersensitivity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to antigenic stimulus","termid":"GO:0002864"},{"relation_name":"regulates","term_name":"hypersensitivity","termid":"GO:0002524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hypersensitivity","termid":"GO:0002883"}


id: PBO:0069901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1192, pseudogene","termid":"PBO:0069901"}


id: MOD:00972
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to a monobrominated L-phenylalanine, such as L-2'-bromophenylalanine.","definition_xrefs":["Unimod:340#F"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated phenylalanine","termid":"MOD:01066"},{"relation_name":"is_a","term_name":"monobrominated residue","termid":"MOD:01912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monobrominated L-phenylalanine","synonyms":[{"name":"Br1Phe","type":"exact"},{"name":"Bromo","type":"related"},{"name":"bromination","type":"related"}],"termid":"MOD:00972"}


id: PBO:0078567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif-containing 51","termid":"PBO:0078567"}


id: MONDO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Heimler syndrome (obsolete MONDO:0000202)","termid":"MONDO:0000202","xrefs":{"Monarch":{"xref_id":"0000202"}}}


id: PBO:0067880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 182","termid":"PBO:0067880"}


id: GO:0102304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = 7-epi-sesquithujene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.102","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sesquithujene synthase activity","secondary_identifiers":["RHEA:31991","MetaCyc:RXN-12838"],"termid":"GO:0102304"}


id: MONDO:0008687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Woronets trait","secondary_identifiers":["OMIM:194320","UMLS:C1860237","MEDGEN:348570"],"synonyms":[{"name":"Woronets trait","type":"exact"}],"termid":"MONDO:0008687","xrefs":{"Monarch":{"xref_id":"0008687"}}}


id: GO:0044172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex system of membrane-bounded compartments located between host cell endoplasmic reticulum (ER) and the host Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport.","definition_xrefs":["GOC:jl","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endoplasmic reticulum-Golgi intermediate compartment","synonyms":[{"name":"host ER-Golgi intermediate compartment","type":"exact"},{"name":"host cell ER-Golgi intermediate compartment","type":"exact"}],"termid":"GO:0044172"}


id: PBO:0062224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AS member 1","termid":"PBO:0062224"}


id: PBO:0036315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exomer complex BRCT domain subunit Cfr1","termid":"PBO:0036315"}


id: GO:0032307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of a prostaglandin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of icosanoid secretion","termid":"GO:0032304"},{"relation_name":"is_a","term_name":"regulation of prostaglandin secretion","termid":"GO:0032306"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"negatively_regulates","term_name":"prostaglandin secretion","termid":"GO:0032310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of prostaglandin secretion","synonyms":[{"name":"down regulation of prostaglandin secretion","type":"exact"},{"name":"down-regulation of prostaglandin secretion","type":"exact"},{"name":"downregulation of prostaglandin secretion","type":"exact"},{"name":"inhibition of prostaglandin secretion","type":"narrow"},{"name":"negative regulation of prostacyclin secretion","type":"narrow"}],"termid":"GO:0032307"}


id: MONDO:0030839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid hormone metabolism, abnormal","termid":"MONDO:0031432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone metabolism, abnormal, 2","secondary_identifiers":["MEDGEN:1812066","OMIM:619855","UMLS:C5676976"],"synonyms":[{"name":"THMA2","type":"exact"},{"name":"thyroid hormone metabolism, abnormal, 2","type":"exact"}],"termid":"MONDO:0030839","xrefs":{"Monarch":{"xref_id":"0030839"}}}


id: PBO:0090210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA snoRNP assembly protein Shq1","termid":"PBO:0090210"}


id: PBO:0060388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myeloid zinc finger 1","termid":"PBO:0060388"}


id: PBO:0083180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the dubious ORF YIL100C-A","termid":"PBO:0083180"}


id: PBO:0071734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 32","termid":"PBO:0071734"}


id: PBO:0030442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_tRNA_methylation","termid":"PBO:0030442"}


id: FYPO:0003988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has actin cortical patches in one or more abnormal locations.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"mislocalized actin cortical patches","termid":"FYPO:0006771"},{"relation_name":"output_of","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0004803"],"is_obsolete":false,"name":"mislocalized actin cortical patches during vegetative growth","synonyms":[{"name":"abnormal actin cortical patch location during vegetative growth","type":"exact"},{"name":"abnormal actin cortical patch position during vegetative growth","type":"exact"},{"name":"mislocalised actin cortical patches during vegetative growth","type":"exact"},{"name":"mislocalized F-actin patches during vegetative growth","type":"exact"},{"name":"mislocalized actin cortical patches during mitotic cell cycle","type":"related"},{"name":"mislocalized actin patches during vegetative growth","type":"exact"}],"termid":"FYPO:0003988"}


id: FYPO:0000189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mRNA splicing via the spliceosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA splicing, via spliceosome","termid":"FYPO:0002915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000294","FYPO:0006551"],"is_obsolete":false,"name":"abnormal mRNA splicing, via spliceosome","synonyms":[{"name":"abnormal mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"abnormal mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"abnormal nuclear mRNA splicing, via spliceosome","type":"exact"}],"termid":"FYPO:0000189"}


id: GO:0072753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glutathione stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glutathione","termid":"GO:1901370"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glutathione","termid":"GO:0072753"}


id: SO:0001605
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant within a CDS resulting in the gain of an amino acid to the resulting polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequence_variant","termid":"SO:0001603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_insertion","synonyms":[{"name":"amino acid insertion","type":"exact"}],"termid":"SO:0001605"}


id: GO:1901738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vitamin A metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:18093975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"regulates","term_name":"vitamin A metabolic process","termid":"GO:0006776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"regulation of vitamin A metabolic process","synonyms":[{"name":"regulation of vitamin A metabolism","type":"exact"}],"termid":"GO:1901738"}


id: GO:0090547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of low humidity stimulus, reduced moisture in the atmosphere.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to humidity","termid":"GO:0009270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to low humidity","termid":"GO:0090547"}


id: PBO:0108624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1101/ mitochondrial ribosome assembly protein Rsm22 fusion protein","termid":"PBO:0108624"}


id: MOD:01141
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride, Pmc chloride, to form omega-N-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-arginine.","definition_xrefs":["DeltaMass:314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride derivatized residue","termid":"MOD:01120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"omega-N-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-arginine","synonyms":[{"name":"PMC arginyl","type":"exact"},{"name":"PmcArg","type":"exact"}],"termid":"MOD:01141"}


id: PBO:0069967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1262, pseudogene","termid":"PBO:0069967"}


id: _global:directly_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"_global:regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_regulated_by","secondary_identifiers":["RO:0002022"],"termid":"_global:directly_regulated_by"}


id: PBO:0041521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 54","termid":"PBO:0041521"}


id: GO:0017128
data:
  {"annotated_genes":["SJAG_01470","SJAG_03076","SJAG_03100"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73556,101759,103935],"is_not":false,"summary":null,"term":"GO:0017128"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of phospholipids from one membrane bilayer leaflet to the other, by an ATP-independent mechanism.","definition_xrefs":["GOC:cjm","PMID:20043909","PMID:20302864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"intramembrane lipid transporter activity","termid":"GO:0140303"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01470":null,"SJAG_03076":null,"SJAG_03100":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0140303"],"is_obsolete":false,"name":"phospholipid scramblase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0017128","terms_by_termid":{"GO:0017128":null}}


id: PBO:0040048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1A pseudogene 4","termid":"PBO:0040048"}


id: PBO:0088981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L43","termid":"PBO:0088981"}


id: PBO:0088437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dubious, no evidence for translation on annotated strand","termid":"PBO:0088437"}


id: PBO:0078175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-6","termid":"PBO:0078175"}


id: PBO:0058501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5692c-1","termid":"PBO:0058501"}


id: PR:O13750
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11117:SF3","PRO:DNx","OMA:SCHPO01475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinyl-CoA ligase [ADP-forming] subunit alpha, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.17c","secondary_identifiers":["UniProtKB:O13750"],"synonyms":[{"name":"SCS-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SUCLG1","type":"exact"},{"name":"succinyl-CoA synthetase subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13750"}


id: PBO:0056139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper tumor suppressor 1","termid":"PBO:0056139"}


id: PBO:0110985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cis-acting regulatory lncRNA nam1, byr2 repressing","termid":"PBO:0110985"}


id: FYPO:0005400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to the presence of DNA double-strand breaks is abnormal.","definition_xrefs":["PMID:12628934","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to DNA double-strand break","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to DNA double-strand break","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to DNA double-strand break during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to DNA double-strand break during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to DNA double-strand break","type":"exact"}],"termid":"FYPO:0005400"}


id: PBO:0091727
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Upregulated During Septation","termid":"PBO:0091727"}


id: PBO:0074024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 15 pseudogene 2","termid":"PBO:0074024"}


id: MONDO:1012264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"androgen insensitivity syndrome, non-human animal","termid":"MONDO:1011919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen insensitivity syndrome, dog","secondary_identifiers":["OMIA:000991-9615"],"synonyms":[{"name":"AIS, dog","type":"exact"}],"termid":"MONDO:1012264","xrefs":{"Monarch":{"xref_id":"1012264"}}}


id: GO:0021595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the rhombomere structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates.","definition_xrefs":["GOC:dph","GOC:jid","ISBN:0838580343","GOC:cls","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"rhombomere morphogenesis","termid":"GO:0021593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere structural organization","synonyms":[{"name":"rhombomere structural organisation","type":"exact"}],"termid":"GO:0021595"}


id: PR:Q9P6J7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1683.03c gene.","definition_xrefs":["UniProtKB:Q9P6J7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C1683.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.03c","synonyms":[{"name":"Spom972h-SPBC1683.03c","type":"exact"}],"termid":"PR:Q9P6J7"}


id: MONDO:0030487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylometaphyseal dysplasia, pagnamenta type","secondary_identifiers":["UMLS:C5562030","OMIM:619638","MEDGEN:1794240"],"synonyms":[{"name":"SMDP","type":"exact"}],"termid":"MONDO:0030487","xrefs":{"Monarch":{"xref_id":"0030487"}}}


id: GO:0048939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a glial cell in the anterior lateral line nerve over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell development","termid":"GO:0048937"},{"relation_name":"part_of","term_name":"anterior lateral line nerve glial cell differentiation","termid":"GO:0048913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line nerve glial cell development","termid":"GO:0048939"}


id: PBO:0045297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 49","termid":"PBO:0045297"}


id: PBO:0077209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 7 superfamily member 3","termid":"PBO:0077209"}


id: PBO:0047170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 3","termid":"PBO:0047170"}


id: SO:0001862
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A dinucleotide repeat region composed of GT repeating elements.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide_repeat_microsatellite_feature","termid":"SO:0000290"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GT_dinucleotide_repeat","synonyms":[{"name":"d(GT)n","type":"exact"}],"termid":"SO:0001862"}


id: GO:0045232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an S-layer enveloping the cell. The S-layer is a crystalline protein layer surrounding some bacteria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure organization","termid":"GO:0045229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"S-layer organization","synonyms":[{"name":"S-layer organisation","type":"exact"},{"name":"S-layer organization and biogenesis","type":"related"}],"termid":"GO:0045232"}


id: MONDO:0019479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant neoplasm with a poor response to therapy, usually presenting as stage III/IV disease. It is characterized by the presence of neoplastic cells with morphologic and immunophenotypic characteristics similar to those seen in mature histiocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytic and dendritic cell neoplasm","termid":"MONDO:0006247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"histiocytic sarcoma","secondary_identifiers":["icd11.foundation:911785965","NCIT:C27349","UMLS:C0334663","Orphanet:86896","DOID:0080915","MEDGEN:137793","ONCOTREE:HS","icd11.foundation:1925254893","ICD10CM:C96.A","ICD9:171.9","MESH:D054747","ICDO:9755/3","GARD:19080","SCTID:109988003"],"synonyms":[{"name":"histiocytic sarcoma","type":"exact"},{"name":"sarcoma, histiocytic, malignant","type":"exact"}],"termid":"MONDO:0019479","xrefs":{"Monarch":{"xref_id":"0019479"}}}


id: GO:0046786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of organizing and assembling viral replication proteins in preparation for viral replication.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral replication complex formation and maintenance","termid":"GO:0046786"}


id: GO:0015896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of nalidixic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nalidixic acid is a synthetic antibiotic that interferes with DNA gyrase and inhibits prokaryotic replication.","definition_xrefs":["GOC:curators","PMID:12702699","PubChem_Compound:4221"],"gene_count":0,"genotype_count":0,"name":"obsolete nalidixic acid transport (obsolete GO:0015896)","termid":"GO:0015896"}


id: MONDO:0016682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare histological variant of glioblastoma (WHO grade IV) with a predominance of bizarre, multinucleated giant cells, an occasionally abundant stromal reticulin network, and a high frequency of TP53 mutations. (WHO)","definition_xrefs":["NCIT:C4325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain glioblastoma","termid":"MONDO:0002501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"giant cell glioblastoma","secondary_identifiers":["DOID:3074","UMLS:C0334588","Orphanet:251579","GARD:20705","ICDO:9441/3","icd11.foundation:565094124","MEDGEN:83169"],"synonyms":[{"name":"Monstrocellular sarcoma","type":"exact"},{"name":"Monstrocellular sarcoma [obs]","type":"exact"}],"termid":"MONDO:0016682","xrefs":{"Monarch":{"xref_id":"0016682"}}}


id: FYPO:0001201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to calcium ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to calcium ion starvation","synonyms":[{"name":"decreased growth during cellular response to calcium ion starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to calcium ion starvation","type":"exact"},{"name":"hypersensitive to calcium ion starvation","type":"exact"},{"name":"reduced growth in low calcium","type":"related"},{"name":"sensitive to calcium ion depletion","type":"exact"},{"name":"sensitive to calcium ion deprivation","type":"exact"},{"name":"sensitive to calcium ion starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to calcium ion starvation during vegetative growth","type":"exact"},{"name":"sensitive to calcium starvation","type":"exact"}],"termid":"FYPO:0001201"}


id: MONDO:0018720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete common cystic lymphatic malformation (obsolete MONDO:0018720)","secondary_identifiers":["Orphanet:458833"],"termid":"MONDO:0018720","xrefs":{"Monarch":{"xref_id":"0018720"}}}


id: GO:0071935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of octopamine to a receptor on the surface of the target cell that contributes to a response to a food stimulus.","definition_xrefs":["PMID:19609300","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octopamine signaling pathway","termid":"GO:0071927"},{"relation_name":"part_of","term_name":"response to food","termid":"GO:0032094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"octopamine signaling pathway involved in response to food","synonyms":[{"name":"octopamine signalling pathway involved in response to food","type":"exact"}],"termid":"GO:0071935"}


id: MONDO:0010784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloramphenicol toxicity","secondary_identifiers":["MEDGEN:374104","OMIM:515000","UMLS:C1838989"],"synonyms":[{"name":"anemia, chloramphenicol-induced","type":"related"},{"name":"chloramphenicol resistance","type":"related"},{"name":"chloramphenicol toxicity","type":"exact"}],"termid":"MONDO:0010784","xrefs":{"Monarch":{"xref_id":"0010784"}}}


id: PBO:0003442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anamorsin family protein, involved in iron-sulphur cluster assembly (predicted)","termid":"PBO:0003442"}


id: GO:0141212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with activation of phospholipase C (PLC) activity and ends with the activation of protein kinase C (PKC). PLC produces inositol 1,4,5-trisphosphate (IP3) and diacylglycerol (DAG). IP3 regulates the opening of calcium channels in intracellular calcium store, leading to the release of calcium into the cytosol. Calcium and DAG activate protein kinase C (PKC), which in turn activates downstream effectors. This cassette is often part of the phospholipase C-activating G protein-coupled receptor signaling pathway.","definition_xrefs":["PMID:26605346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C/protein kinase C signal transduction","synonyms":[{"name":"PLC/PKC signaling","type":"exact"},{"name":"PLC/PKC/PKD signaling","type":"exact"}],"termid":"GO:0141212"}


id: PBO:0072304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S25 pseudogene 1","termid":"PBO:0072304"}


id: PBO:0073535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain containing kinase binding protein 1","termid":"PBO:0073535"}


id: GO:0045897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription during mitotic cell cycle (obsolete GO:0045897)","synonyms":[{"name":"activation of transcription during mitosis","type":"narrow"},{"name":"mitotic activation of transcription","type":"exact"},{"name":"positive regulation of transcription, mitotic","type":"exact"},{"name":"stimulation of transcription during mitosis","type":"narrow"},{"name":"up regulation of transcription during mitosis","type":"exact"},{"name":"up-regulation of transcription during mitosis","type":"exact"},{"name":"upregulation of transcription during mitosis","type":"exact"}],"termid":"GO:0045897"}


id: PBO:0059502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded ATP synthase membrane subunit 6","termid":"PBO:0059502"}


id: MONDO:0015455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the conjunctiva in a newborn due to Neisseria gonorrhoeae which was acquired during labor and delivery.","definition_xrefs":["NCIT:C116816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"bacterial conjunctivitis","termid":"MONDO:0006668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"gonococcal conjunctivitis","secondary_identifiers":["GARD:2546","ICD10EXP:A54.3+","ICD10CM:A54.31","icd11.foundation:884042621","MEDGEN:1830271","Orphanet:1482","UMLS:C5779547","ICD10EXP:H13.1*","SCTID:231858009"],"synonyms":[{"name":"conjunctivitis gonococcal","type":"exact"},{"name":"gonococcal ophthalmia neonatorum","type":"exact"}],"termid":"MONDO:0015455","xrefs":{"Monarch":{"xref_id":"0015455"}}}


id: FYPO:0003116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to plumbagin. Cells stop growing (and may die) at a concentration of plumbagin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to plumbagin","synonyms":[{"name":"hypersensitive to plumbagin","type":"exact"},{"name":"sensitive to plumbagin during mitotic cell cycle","type":"related"},{"name":"sensitive to plumbagin during vegetative growth","type":"exact"}],"termid":"FYPO:0003116"}


id: MONDO:0011623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar ataxia, autosomal recessive 1 (obsolete MONDO:0011623)","termid":"MONDO:0011623","xrefs":{"Monarch":{"xref_id":"0011623"}}}


id: GO:0140517
data:
  {"annotated_genes":["SJAG_01249","SJAG_04601","SJAG_03629","SJAG_01638","SJAG_00943","SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104647,108462],"is_not":false,"summary":null,"term":"GO:0140517"},{"annotations":[118527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990247"},{"annotations":[100801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160134"},{"annotations":[97560,107686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180014"}]},"cv_name":"molecular_function","definition":"The binding activity of a protein that brings together another protein and an RNA, permitting those molecules to function in a coordinated way.","definition_xrefs":["PMID:24470144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00943":null,"SJAG_01249":null,"SJAG_01638":null,"SJAG_02622":null,"SJAG_03629":null,"SJAG_04601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"protein-RNA adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140517","terms_by_termid":{"GO:0140517":null,"GO:0160134":null,"GO:0180014":null,"GO:1990247":null}}


id: PBO:0075380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 18","termid":"PBO:0075380"}


id: PBO:0040573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-galactosyltransferase 7","termid":"PBO:0040573"}


id: FYPO:0002071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a nucleus in an abnormal location. The normal location of a single nucleus is at the midpoint of the long axis of the cell (during mitotic telophase, daughter nuclei normally move away from the cell division site).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"},{"relation_name":"output_of","term_name":"abnormal nucleus positioning during vegetative growth","termid":"FYPO:0001338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"mislocalized nucleus during vegetative growth","synonyms":[{"name":"abnormal nucleus location during vegetative growth","type":"exact"},{"name":"abnormal nucleus position during vegetative growth","type":"exact"},{"name":"displaced nucleus during vegetative growth","type":"exact"},{"name":"mislocalised nucleus during vegetative growth","type":"exact"},{"name":"mislocalized nucleus during mitotic cell cycle","type":"related"},{"name":"misplaced nuclei during vegetative growth","type":"exact"},{"name":"misplaced nucleus during vegetative growth","type":"exact"},{"name":"nuclear displacement during vegetative growth","type":"exact"}],"termid":"FYPO:0002071"}


id: GO:0032951
data:
  {"annotated_genes":["SJAG_04659","SJAG_04668","SJAG_01255","SJAG_04509","SJAG_04771","SJAG_01787","SJAG_04666","SJAG_00610","SJAG_04462","SJAG_03705"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88214],"is_not":false,"summary":null,"term":"GO:0032951"},{"annotations":[92750,87839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[118436,118302,105700,103188,91096,92734,106275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways relusting in the formation of beta-glucans.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucan biosynthetic process","termid":"GO:0010962"},{"relation_name":"is_a","term_name":"regulation of beta-glucan metabolic process","termid":"GO:0032950"},{"relation_name":"regulates","term_name":"beta-glucan biosynthetic process","termid":"GO:0051274"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01255":null,"SJAG_01787":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of beta-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of beta-glucan anabolism","type":"exact"},{"name":"regulation of beta-glucan biosynthesis","type":"exact"},{"name":"regulation of beta-glucan formation","type":"exact"},{"name":"regulation of beta-glucan synthesis","type":"exact"}],"termid":"GO:0032951","terms_by_termid":{"GO:0032951":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0064392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 14","termid":"PBO:0064392"}


id: PBO:0050660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 beta family member 3, pseudogene","termid":"PBO:0050660"}


id: PBO:0051726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitory synaptic factor 2A","termid":"PBO:0051726"}


id: GO:0039536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the RIG-I signaling pathway.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"is_a","term_name":"regulation of RIG-I signaling pathway","termid":"GO:0039535"},{"relation_name":"negatively_regulates","term_name":"RIG-I signaling pathway","termid":"GO:0039529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of RIG-I signaling pathway","synonyms":[{"name":"negative regulation of DDX58 signaling pathway","type":"exact"},{"name":"negative regulation of RIG-I signalling pathway","type":"exact"},{"name":"negative regulation of retinoic acid inducible gene I signaling pathway","type":"exact"}],"termid":"GO:0039536"}


id: PBO:0060417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 80, NatH catalytic subunit","termid":"PBO:0060417"}


id: MOD:01358
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label - Use when labelling post-digest","definition_xrefs":["Unimod:687#N-term","PubMed:15602776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, medium form - site N-term","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, medium form","type":"related"},{"name":"ICPL:2H(4)","type":"related"}],"termid":"MOD:01358"}


id: PBO:0042181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B1 interacting protein 1 pseudogene 1","termid":"PBO:0042181"}


id: PBO:0040261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 14","termid":"PBO:0040261"}


id: PBO:0018037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght2","termid":"PBO:0018037"}


id: PBO:0083583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; transcription of both YLK153W and the overlapping essential gene GPM1 is reduced in the gcr1 null mutant","termid":"PBO:0083583"}


id: FYPO:0005435
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that has an elongated germ tube and a nucleus that is broken into multiple small fragments, and does not go on to give rise to a viable cell population.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination with elongated germ tube","termid":"FYPO:0000314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination with elongated germ tube and fragmented nucleus","synonyms":[{"name":"inviable after spore germination with elongated germ tube and fragmented nuclear DNA","type":"related"},{"name":"inviable after spore germination with elongated germ tube and fragmented nuclear material","type":"exact"},{"name":"inviable after spore germination with elongated germ tube and fragmented nuclei","type":"exact"},{"name":"inviable after spore germination, elongated cell with fragmented nucleus","type":"exact"},{"name":"inviable following spore germination with elongated germ tube and fragmented nucleus","type":"exact"},{"name":"inviable germinated spore with elongated germ tube and fragmented nucleus","type":"exact"},{"name":"lethal after spore germination with elongated germ tube and fragmented nucleus","type":"exact"}],"termid":"FYPO:0005435"}


id: PBO:0028628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0028628"}


id: GO:1990065
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is involved in the MEP pathway of IPP biosynthesis. It catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP).","definition_xrefs":["GOC:bhm","PMID:15339150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Dxr protein complex","synonyms":[{"name":"1-deoxy-D-xylulose 5-phosphate reductoisomerase complex","type":"exact"}],"termid":"GO:1990065"}


id: GO:0070116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thylakoid located in an organellar chromatophore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid","termid":"GO:0009579"},{"relation_name":"part_of","term_name":"organellar chromatophore","termid":"GO:0070111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"organellar chromatophore thylakoid","synonyms":[{"name":"Paulinella-type chromatophore thylakoid","type":"exact"}],"termid":"GO:0070116"}


id: PBO:0059837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTFR1 pseudogene 1","termid":"PBO:0059837"}


id: PBO:0027597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_telomere_during_vegetative_growth","termid":"PBO:0027597"}


id: MONDO:0034819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare familial intestinal malformation characterized by failure of the rotation of the developing gastrointestinal tract around the superior mesenteric artery during embryonic development, resulting in a spectrum of abnormalities of intestinal position and fixation. Patients most typically present in the neonatal period with midgut volvulus, which can lead to short bowel syndrome or even death. Signs and symptoms include bilious vomiting, feeding intolerance, failure to thrive, constipation, bloody stools, or intermittent apnea. The condition may also manifest later in life with complications like kinking or hernias and a broad range of intestinal symptoms. It can be an isolated finding or occur in association with other anomalies.","definition_xrefs":["Orphanet:508410"],"gene_count":0,"genotype_count":0,"name":"obsolete familial intestinal malrotation (obsolete MONDO:0034819)","termid":"MONDO:0034819","xrefs":{"Monarch":{"xref_id":"0034819"}}}


id: PR:Q9US00
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- amt2 gene.","definition_xrefs":["UniProtKB:Q9US00","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.14","synonyms":[{"name":"Spom972h-amt2","type":"exact"}],"termid":"PR:Q9US00"}


id: GO:0035220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Progression of the wing disc over time, from its initial formation through to its metamorphosis to form adult structures including the wing hinge, wing blade and pleura.","definition_xrefs":["GOC:bf","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc development","termid":"GO:0007444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc development","termid":"GO:0035220"}


id: GO:0042891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of an antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete antibiotic transport (obsolete GO:0042891)","termid":"GO:0042891"}


id: PBO:0081434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 285D, pseudogene","termid":"PBO:0081434"}


id: PBO:0073621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 7","termid":"PBO:0073621"}


id: PBO:0072101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 32","termid":"PBO:0072101"}


id: PBO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.10","termid":"PBO:0000918"}


id: MONDO:0017166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare tumor of salivary glands (obsolete MONDO:0017166)","secondary_identifiers":["Orphanet:276142"],"termid":"MONDO:0017166","xrefs":{"Monarch":{"xref_id":"0017166"}}}


id: PBO:0017437
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-related_via_localization_to","termid":"PBO:0017437"}


id: MONDO:0042979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypokalemic periodic paralysis","termid":"MONDO:0008223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypokalemic periodic paralysis, type 1","secondary_identifiers":["OMIM:170400","UMLS:C3714580","MEDGEN:811387"],"synonyms":[{"name":"HOKPP1","type":"related"},{"name":"hypokalemic periodic paralysis, type 1","type":"exact"}],"termid":"MONDO:0042979","xrefs":{"Monarch":{"xref_id":"0042979"}}}


id: PBO:0036298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg101","termid":"PBO:0036298"}


id: GO:0018653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-methyl-2-oxo-1,2-dihydroquinoline + O2 + 2 H+ + 2 e- = H2O + 6-hydroxy-3-methyl-2-oxo-1,2-dihydroquinoline.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-methyl-2-oxo-1,2-dihydroquinoline 6-monooxygenase activity (obsolete GO:0018653)","termid":"GO:0018653"}


id: PATO:0000090
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000090 relative sensitivity (obsolete PATO:0000090)","termid":"PATO:0000090"}


id: PBO:0005630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 2, Pre8 (predicted)","termid":"PBO:0005630"}


id: PR:Q9HDW4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB2B4.07 gene.","definition_xrefs":["UniProtKB:Q9HDW4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB2B4.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.07","synonyms":[{"name":"Spom972h-SPAPB2B4.07","type":"exact"}],"termid":"PR:Q9HDW4"}


id: PBO:0046747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 3 like 2","termid":"PBO:0046747"}


id: PBO:0013473
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A delays mitotic entry in cdc25-22 mutant","termid":"PBO:0013473"}


id: MONDO:0032896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 42","secondary_identifiers":["MEDGEN:1684744","DOID:0111923","GARD:18413","UMLS:C5231488","OMIM:618745"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 42","type":"related"},{"name":"SPGF42","type":"related"}],"termid":"MONDO:0032896","xrefs":{"Monarch":{"xref_id":"0032896"}}}


id: GO:0034123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor signaling pathway","termid":"GO:0034121"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor signaling pathway","synonyms":[{"name":"positive regulation of TLR signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034123"}


id: PBO:0051376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3/OR22-2 (pseudogene)","termid":"PBO:0051376"}


id: GO:0010232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances, into, out of or within a cell, either in a vascular tissue or in the vascular membrane.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"vascular transport","termid":"GO:0010232"}


id: PBO:0030820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_sodium_export","termid":"PBO:0030820"}


id: MONDO:0007608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A desmoid tumor (DT) is a benign, locally invasive soft tissue tumor associated with a high recurrence rate but with no metastatic potential.","definition_xrefs":["Orphanet:873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibromatosis","termid":"MONDO:0005031"},{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoid tumor","secondary_identifiers":["NCIT:C9182","ICDO:8821/1","MEDGEN:38187","EFO:0009907","UMLS:C0079218","OMIM:135290","GARD:1820","DOID:0080366","ONCOTREE:DES"],"synonyms":[{"name":"FIF","type":"related"},{"name":"aggressive fibromatosis","type":"exact"},{"name":"deep fibromatosis","type":"exact"},{"name":"deep fibromatosis/desmoid tumor","type":"exact"},{"name":"deep fibromatosis/desmoid tumour","type":"exact"},{"name":"desmoid disease, hereditary","type":"related"},{"name":"desmoid disorder, hereditary","type":"related"},{"name":"desmoid fibromatosis","type":"exact"},{"name":"desmoid tumor","type":"exact"},{"name":"desmoid type fibromatosis","type":"exact"},{"name":"desmoid-type fibromatosis","type":"exact"},{"name":"desmoid/aggressive fibromatosis","type":"related"},{"name":"familial infiltrative fibromatosis","type":"related"},{"name":"fibromatosis, familial infiltrative","type":"related"}],"termid":"MONDO:0007608","xrefs":{"Monarch":{"xref_id":"0007608"}}}


id: FYPO:0007157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"abnormal histone binding","termid":"FYPO:0007157"}


id: GO:1904554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemotaxis to arachidonic acid.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16382163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"regulation of chemotaxis to arachidonate","termid":"GO:1904552"},{"relation_name":"positively_regulates","term_name":"chemotaxis to arachidonate","termid":"GO:0034670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemotaxis to arachidonate","synonyms":[{"name":"activation of chemotaxis to arachidonic acid","type":"narrow"},{"name":"positive regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"up regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"up-regulation of chemotaxis to arachidonic acid","type":"exact"},{"name":"upregulation of chemotaxis to arachidonic acid","type":"exact"}],"termid":"GO:1904554"}


id: FYPO:0000975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to mercury ions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000298","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular response to mercury ion","synonyms":[{"name":"normal cellular response to mercury","type":"exact"},{"name":"normal cellular response to mercury ion during mitotic cell cycle","type":"related"},{"name":"normal cellular response to mercury ion during vegetative growth","type":"exact"}],"termid":"FYPO:0000975"}


id: MONDO:0003156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenosquamous carcinoma (obsolete MONDO:0003156)","termid":"MONDO:0003156","xrefs":{"Monarch":{"xref_id":"0003156"}}}


id: MONDO:0800442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heart disease that is present at birth that is caused by a variation in MYH-6. Representative examples include atrial septal defect, ventricular septal defect, tetralogy of Fallot and hypoplastic left heart syndrome.","definition_xrefs":["PMID:22194935","PMID:34384224","PMID:35863714","PMID:29505555","PMID:29590334","PMID:34481090","PMID:31638415","PMID:29969989","PMID:15735645","PMID:20656787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart defects, multiple types","termid":"MONDO:0000119"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"MYH-6 related congenital heart defects","synonyms":[{"name":"MYH6 related congenital heart defects","type":"exact"}],"termid":"MONDO:0800442","xrefs":{"Monarch":{"xref_id":"0800442"}}}


id: PBO:0052455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 6","termid":"PBO:0052455"}


id: PBO:0026879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_regulation_during_cellular_response_to_latrunculin_A","termid":"PBO:0026879"}


id: MONDO:0002706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endometriosis that affects the cervix. Most patients are asymptomatic. Some patients may present with recurrent minimal uterine bleeding.","definition_xrefs":["NCIT:C27623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"},{"relation_name":"is_a","term_name":"endometriosis","termid":"MONDO:0005133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervix endometriosis","secondary_identifiers":["DOID:361","SCTID:61640006","UMLS:C0269107","MEDGEN:78705"],"synonyms":[{"name":"cervical endometriosis","type":"exact"},{"name":"endometriosis (disease) of uterine cervix","type":"exact"},{"name":"endometriosis of cervix","type":"exact"},{"name":"uterine cervix endometriosis (disease)","type":"exact"}],"termid":"MONDO:0002706","xrefs":{"Monarch":{"xref_id":"0002706"}}}


id: GO:1904178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of adipose tissue development.","definition_xrefs":["GO_REF:0000058","PMID:23081848","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of adipose tissue development","termid":"GO:1904177"},{"relation_name":"negatively_regulates","term_name":"adipose tissue development","termid":"GO:0060612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adipose tissue development","synonyms":[{"name":"down regulation of adipogenesis","type":"related"},{"name":"down regulation of adipose tissue development","type":"exact"},{"name":"down-regulation of adipogenesis","type":"related"},{"name":"down-regulation of adipose tissue development","type":"exact"},{"name":"downregulation of adipogenesis","type":"related"},{"name":"downregulation of adipose tissue development","type":"exact"},{"name":"inhibition of adipogenesis","type":"related"},{"name":"inhibition of adipose tissue development","type":"narrow"},{"name":"negative regulation of adipogenesis","type":"related"}],"termid":"GO:1904178"}


id: MOD:01900
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-threonine residue to form L-cysteine 5-methyloxazole-4-carboxylic acid.","definition_xrefs":["PubMed:21568297","RESID:AA0571","PubMed:21950656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Thr)","termid":"MOD:01422"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine 5-methyloxazole-4-carboxylic acid","synonyms":[{"name":"2-[(1R)-1-amino-2-sulfanylethyl]-5-methyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-[(1R)-1-azanyl-2-sulfanylethyl]-5-methyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-methyloxazole-4-carboxylic acid (Cys-Thr)","type":"exact"},{"name":"L-cysteine 5-methyloxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01900"}


id: PBO:0040357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 6","termid":"PBO:0040357"}


id: GO:1901630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of presynaptic membrane organization.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of presynaptic membrane organization","termid":"GO:1901629"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"presynaptic membrane organization","termid":"GO:0097090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of presynaptic membrane organization","synonyms":[{"name":"down regulation of presynaptic membrane organisation","type":"exact"},{"name":"down regulation of presynaptic membrane organization","type":"exact"},{"name":"down-regulation of presynaptic membrane organisation","type":"exact"},{"name":"down-regulation of presynaptic membrane organization","type":"exact"},{"name":"downregulation of presynaptic membrane organisation","type":"exact"},{"name":"downregulation of presynaptic membrane organization","type":"exact"},{"name":"inhibition of presynaptic membrane organisation","type":"narrow"},{"name":"inhibition of presynaptic membrane organization","type":"narrow"},{"name":"negative regulation of pre-synaptic membrane organization","type":"exact"},{"name":"negative regulation of presynaptic membrane organisation","type":"exact"}],"termid":"GO:1901630"}


id: PBO:0062008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily J member 2","termid":"PBO:0062008"}


id: SO:0001726
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 27th residue (a lysine), from the start of the H3 histone protein is di-methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K27_methylation_site","termid":"SO:0001732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K27_dimethylation_site","synonyms":[{"name":"H3K27 di-methylation site","type":"exact"},{"name":"H3K27Me2","type":"related"}],"termid":"SO:0001726"}


id: MONDO:0032925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respiratory papillomatosis, juvenile recurrent, congenital","secondary_identifiers":["MEDGEN:1719353","OMIM:618803","UMLS:C5394112"],"synonyms":[{"name":"JRRP","type":"related"},{"name":"RESPIRATORY PAPILLOMATOSIS, JUVENILE RECURRENT, CONGENITAL","type":"related"}],"termid":"MONDO:0032925","xrefs":{"Monarch":{"xref_id":"0032925"}}}


id: GO:0061277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a mesonephric nephron tubule from unspecified parts. A mesonephric nephron tubule is an epithelial tube that is part of a nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule formation","termid":"GO:0072172"},{"relation_name":"part_of","term_name":"mesonephric nephron tubule morphogenesis","termid":"GO:0061240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron tubule formation","termid":"GO:0061277"}


id: PBO:0050573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HCLS1 binding protein 3","termid":"PBO:0050573"}


id: FYPO:0002149
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are inviable and elongated in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable elongated vegetative cell population (obsolete FYPO:0002149)","termid":"FYPO:0002149"}


id: PR:Q10302
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22H10.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.09","synonyms":[{"name":"Spom972h-SPAC22H10.09","type":"exact"}],"termid":"PR:Q10302"}


id: FYPO:0001457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tunicamycin. Cells stop growing (and may die) at a concentration of tunicamycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to tunicamycin","synonyms":[{"name":"hypersensitive to tunicamycin","type":"exact"},{"name":"sensitive to tunicamycin during mitotic cell cycle","type":"related"},{"name":"sensitive to tunicamycin during vegetative growth","type":"exact"}],"termid":"FYPO:0001457"}


id: SO:1000125
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000125 sequence_variant_causing_gain_of_function_of_polypeptide (obsolete SO:1000125)","synonyms":[{"name":"gain of function of polypeptide","type":"exact"},{"name":"mutation causing gain of function of polypeptide","type":"related"},{"name":"sequence variant causing gain of function of polypeptide","type":"exact"}],"termid":"SO:1000125"}


id: PBO:0067972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 274","termid":"PBO:0067972"}


id: PBO:0055910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 34 pseudogene 1","termid":"PBO:0055910"}


id: PBO:0083348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene ECM38","termid":"PBO:0083348"}


id: GO:0010348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Li+(in) + H+(out) = Li+(out) + H+(in).","definition_xrefs":["PMID:17270011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"lithium:proton antiporter activity","synonyms":[{"name":"lithium:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0010348"}


id: MONDO:0001369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent laryngitis usually caused by smoking, heavy alcohol consumption, voice abuse, or gastroesophageal reflux disease. It results in hoarseness and other voice changes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngitis","termid":"MONDO:0002647"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic laryngitis","secondary_identifiers":["ICD9:476.0","UMLS:C0155836","SCTID:29951006","ICD10CM:J37.0","icd11.foundation:2009723608","DOID:11797","MEDGEN:102342","NCIT:C26975"],"synonyms":[{"name":"laryngitis, chronic","type":"exact"}],"termid":"MONDO:0001369","xrefs":{"Monarch":{"xref_id":"0001369"}}}


id: GO:0061191
data:
  {"annotated_genes":["SJAG_02433","SJAG_03137"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97956,110638],"is_not":false,"summary":null,"term":"GO:0061191"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the fusion of two vacuole membranes to form a single vacuole.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vacuole fusion, non-autophagic","termid":"GO:0032889"},{"relation_name":"is_a","term_name":"positive regulation of vacuole organization","termid":"GO:0044090"},{"relation_name":"positively_regulates","term_name":"vacuole fusion, non-autophagic","termid":"GO:0042144"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02433":null,"SJAG_03137":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vacuole fusion, non-autophagic","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061191","terms_by_termid":{"GO:0061191":null}}


id: GO:0043960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-erythro-3-methylmalyl-CoA = mesaconyl-CoA + H2O.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"L-erythro-3-methylmalyl-CoA dehydratase activity","termid":"GO:0043960"}


id: GO:0009773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A photosynthetic electron transport chain in which electrons move from the primary electron acceptor (Quinone, X) through a chain of electron transport molecules in the thylakoid membrane until they reach ferredoxin which passes the electron to the ultimate electron acceptor; NADP.","definition_xrefs":["GOC:jid","ISBN:0716731363","ISBN:0816017360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthetic electron transport chain","termid":"GO:0009767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosynthetic electron transport in photosystem I","termid":"GO:0009773"}


id: MONDO:0010921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermoid cyst that involves the nose.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nasal disorder","termid":"MONDO:0002436"},{"relation_name":"is_a","term_name":"facial dermoid cyst","termid":"MONDO:0015380"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal dermoid cyst","secondary_identifiers":["UMLS:C1833473","GARD:16970","MEDGEN:371575","MESH:C563455","OMIM:600679","Orphanet:141103"],"synonyms":[{"name":"dermoid cysts, familial frontonasal","type":"related"},{"name":"nasal dermoid sinus cyst","type":"exact"}],"termid":"MONDO:0010921","xrefs":{"Monarch":{"xref_id":"0010921"}}}


id: MONDO:0011831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any arrhythmogenic right ventricular cardiomyopathy in which the cause of the disease is a mutation in the DSP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arrhythmogenic right ventricular dysplasia 8","secondary_identifiers":["DOID:0110076","MESH:C564400","MEDGEN:336069","OMIM:607450","UMLS:C1843896"],"synonyms":[{"name":"ARVC8","type":"exact"},{"name":"ARVD8","type":"exact"},{"name":"DSP arrhythmogenic right ventricular cardiomyopathy","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy 8","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy caused by mutation in DSP","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia 8","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia type 8","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 8","type":"related"},{"name":"arrhythmogenic right ventricular dysplasia, familial, type 8","type":"exact"},{"name":"familial arrhythmogenic right ventricular dysplasia 8","type":"exact"}],"termid":"MONDO:0011831","xrefs":{"Monarch":{"xref_id":"0011831"}}}


id: MONDO:0100477
data:
  {"annotated_genes":["SJAG_04608"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018767"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that has its basis in the disruption of methylamine metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of peptide and amine metabolism","termid":"MONDO:0100473"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of methylamine metabolism","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100477","terms_by_termid":{"MONDO:0018767":null},"xrefs":{"Monarch":{"xref_id":"0100477"}}}


id: GO:0016123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xanthophylls, oxygen-containing carotenoids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"xanthophyll biosynthetic process","synonyms":[{"name":"xanthophyll anabolism","type":"exact"},{"name":"xanthophyll biosynthesis","type":"exact"},{"name":"xanthophyll formation","type":"exact"},{"name":"xanthophyll synthesis","type":"exact"}],"termid":"GO:0016123"}


id: GO:0000322
data:
  {"annotated_genes":["SJAG_01183","SJAG_01941","SJAG_01319","SJAG_01027","SJAG_02344","SJAG_02330","SJAG_04616","SJAG_02694","SJAG_02231","SJAG_02943","SJAG_02103","SJAG_02440","SJAG_03250","SJAG_03400","SJAG_01145","SJAG_02196","SJAG_05184","SJAG_02060","SJAG_01219","SJAG_01080","SJAG_03403","SJAG_02578","SJAG_02656","SJAG_01619","SJAG_03447","SJAG_03450","SJAG_02782","SJAG_03508","SJAG_01095","SJAG_03363","SJAG_00821","SJAG_04502","SJAG_01505","SJAG_01913","SJAG_00771","SJAG_03951","SJAG_05294","SJAG_03256","SJAG_01817","SJAG_02581","SJAG_03725","SJAG_04785","SJAG_01868","SJAG_01400","SJAG_03511","SJAG_03022","SJAG_01990","SJAG_01978","SJAG_03072","SJAG_04167","SJAG_05342","SJAG_00570","SJAG_03405","SJAG_02132","SJAG_03608","SJAG_02565","SJAG_01983","SJAG_02414","SJAG_04471","SJAG_00209","SJAG_02853","SJAG_03355","SJAG_03895","SJAG_02114","SJAG_07012","SJAG_00212","SJAG_00029","SJAG_02432","SJAG_01509","SJAG_03138","SJAG_05194","SJAG_01299","SJAG_00018","SJAG_03137","SJAG_00688","SJAG_05245","SJAG_00534","SJAG_03100","SJAG_03976","SJAG_01078","SJAG_02902","SJAG_01072","SJAG_04867","SJAG_02076","SJAG_01088","SJAG_00516","SJAG_01344","SJAG_02100","SJAG_04975","SJAG_01493","SJAG_04966","SJAG_00115","SJAG_03406","SJAG_01571","SJAG_03009","SJAG_01507","SJAG_01032","SJAG_00877","SJAG_04725","SJAG_01036","SJAG_04910","SJAG_01783","SJAG_05213","SJAG_02289","SJAG_01320","SJAG_02029","SJAG_03667","SJAG_03442","SJAG_01324","SJAG_01991","SJAG_03928","SJAG_03785","SJAG_01795","SJAG_00132","SJAG_02603","SJAG_02495","SJAG_00587","SJAG_03848","SJAG_02356","SJAG_02957","SJAG_02962","SJAG_03899","SJAG_00402","SJAG_00620","SJAG_00457","SJAG_04643","SJAG_04714","SJAG_03909","SJAG_00181","SJAG_00732","SJAG_01407","SJAG_04506","SJAG_02665","SJAG_01112","SJAG_00299","SJAG_04717","SJAG_03371","SJAG_03987","SJAG_03960","SJAG_04790","SJAG_03089","SJAG_05210","SJAG_01803","SJAG_02433","SJAG_00589","SJAG_04312","SJAG_01471","SJAG_04955","SJAG_02117","SJAG_03652","SJAG_04637","SJAG_04426","SJAG_00824","SJAG_03586","SJAG_00051","SJAG_04963","SJAG_01033","SJAG_01236","SJAG_03656","SJAG_01612","SJAG_00638","SJAG_02716","SJAG_04232","SJAG_03316","SJAG_02023","SJAG_03497","SJAG_04015","SJAG_04023","SJAG_02699","SJAG_03606","SJAG_04698","SJAG_04819"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95154,70636,71021,70876,88455,76198,72820,73244,90458,79808,96402,97291,80287,98864,107899,101853,74022,101212,107987,109803,102184,104337,76725,103274,104736,109705,109820,110169,112723,118346,109185,78905,80630,97932,113243,113111,98859,114553,117213,75387,72229,88257,75612,88762,74329,96824,104105,95416,77028,90459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000324"},{"annotations":[102002,94244,114557,113688,116238,106110,87795,98172,114830,97963,71061],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000328"},{"annotations":[94357,99154,96430,99025,78788,72544,74798,100565,113801,118603,107509,93857,96355,71137,80587,76797,80061,92378,96468,117412,108209,105485,90718,97682,114726,63319,95981,80656,112162,117998,118201,73152,73340,79448,73253,72955,108645,96313,113617,113938,91826,99194,80394,101967,94036,107553,94924,70936,94094,107759,89458,73806,79943,117772,78937,104248,98371,76619,104134,70570,69919,73367,100279,105327,106068,107044,109658,72900,98880,88336,110239,96747,88354,110628,115260,116582,116937,117009,102307,105256,70781,75228,117646,94381,99904,71382,72324,93307,94955,96096,96229,103927,107037,89471,109047,110765,117939,89410,94095,75603,94221,80133,89389,93223,100312,109743,74362,103350,114719,88049,97952],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000329"}]},"cv_name":"cellular_component","definition":"A vacuole that functions primarily in the storage of materials, including nutrients, pigments, waste products, and small 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id: GO:0033650
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id: PBO:0059279
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id: PR:O13684
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id: FYPO:0005014
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id: PBO:0067094
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id: GO:0019442
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id: PBO:0017041
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Tam11","termid":"PBO:0017041"}


id: PBO:0030027
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id: MONDO:1010896
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lysosomal storage disease consistent with sphingomyelin lipidosis that occurs in raccoons.","definition_xrefs":["PMID:23582974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin lipidosis, raccoon","secondary_identifiers":["OMIA:001795-9654"],"synonyms":[{"name":"Niemann-Pick disease, type A, raccoon","type":"related"}],"termid":"MONDO:1010896","xrefs":{"Monarch":{"xref_id":"1010896"}}}


id: FYPO:0007857
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id: PBO:0076916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor AP-2 delta","termid":"PBO:0076916"}


id: FYPO:0002737
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type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__mid2delta":{"display_name":"mid1delta mid2delta","display_uniquename":"mid1delta__mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"mid2delta":{"display_name":"mid2delta","display_uniquename":"mid2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00118:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_00118","SJAG_04522","SJAG_04280","SJAG_02392","SJAG_03596"],"name":"abnormal mitotic cell cycle process","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:32109380":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_03596","SJAG_02392","SJAG_01956","SJAG_04522","SJAG_01330","SJAG_00118","SJAG_03575","SJAG_02592","SJAG_01143","SJAG_03449","SJAG_03351"],"single_locus_genotype_uniquenames":["pom1delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","sty1delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","mid1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","rga4delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","mid2delta","mad2delta"],"synonyms":[{"name":"abnormal mitotic cell cycle process during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle process during vegetative growth","type":"exact"}],"termid":"FYPO:0002737","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0004318":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0031336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving sulfur amino acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sulfur amino acid metabolic process","termid":"GO:0031335"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"sulfur amino acid metabolic process","termid":"GO:0000096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sulfur amino acid metabolic process","synonyms":[{"name":"down regulation of sulfur amino acid metabolic process","type":"exact"},{"name":"down-regulation of sulfur amino acid metabolic process","type":"exact"},{"name":"downregulation of sulfur amino acid metabolic process","type":"exact"},{"name":"inhibition of sulfur amino acid metabolic process","type":"narrow"},{"name":"negative regulation of sulfur amino acid metabolism","type":"exact"}],"termid":"GO:0031336"}


id: GO:0018702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,1-dichloro-2,2-bis(4-chlorophenyl)ethene + H+ + 2 e- = Cl- + 1-chloro-2,2-bis(4-chlorophenyl)ethene. 1,1-dichloro-2,2-bis(4-chlorophenyl)ethene is also known as DDE; 1-chloro-2,2-bis(4-chlorophenyl)ethene is also known as DDMU.","definition_xrefs":["UM-BBD_reactionID:r0440"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,1-dichloro-2,2-bis(4-chlorophenyl)ethene dehalogenase activity (obsolete GO:0018702)","synonyms":[{"name":"1,1-dichloro-2,2-bis(4-chlorophenyl)ethylene dehalogenase activity","type":"exact"},{"name":"DDE dehalogenase activity","type":"exact"}],"termid":"GO:0018702"}


id: PBO:0079799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B10","termid":"PBO:0079799"}


id: GO:0097648
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038038"}]},"cv_name":"cellular_component","definition":"A protein complex that contains G protein-coupled receptors.","definition_xrefs":["GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"G protein-coupled receptor complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"G-protein coupled receptor complex","type":"exact"}],"termid":"GO:0097648","terms_by_termid":{"GO:0038038":null}}


id: MONDO:0015475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare head and neck malformation (obsolete MONDO:0015475)","secondary_identifiers":["Orphanet:155832"],"termid":"MONDO:0015475","xrefs":{"Monarch":{"xref_id":"0015475"}}}


id: PBO:0001163
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structure conflict","termid":"PBO:0001163"}


id: PBO:0039334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha kinase 1","termid":"PBO:0039334"}


id: GO:0019379
data:
  {"annotated_genes":["SJAG_04060","SJAG_04953"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80269,100340],"is_not":false,"summary":null,"term":"GO:0019379"}]},"cv_name":"biological_process","definition":"The pathway by which inorganic sulfate is processed and incorporated into sulfated compounds, where the phosphoadenylyl sulfate reduction step is catalyzed by the enzyme phosphoadenylyl-sulfate reductase (thioredoxin) (EC:1.8.4.8).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate assimilation","termid":"GO:0000103"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04060":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:SO4ASSIM-PWY"],"synonyms":[{"name":"sulphate assimilation, phosphoadenylyl sulphate reduction by a phosphoadenylyl-sulphate reductase (thioredoxin)","type":"exact"}],"termid":"GO:0019379","terms_by_termid":{"GO:0019379":null}}


id: FYPO:0008100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature, polyadenylated 5S rRNA measured in a cell is higher than normal during phosphate starvation.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased polyadenylated rRNA level","termid":"FYPO:0008091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased polyadenylated 5S rRNA level during cellular response to phosphate starvation","termid":"FYPO:0008100"}


id: GO:0050922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a motile cell or organism in response to a specific chemical concentration gradient.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"negative regulation of locomotion","termid":"GO:0040013"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"negatively_regulates","term_name":"chemotaxis","termid":"GO:0006935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chemotaxis","synonyms":[{"name":"down regulation of chemotaxis","type":"exact"},{"name":"down-regulation of chemotaxis","type":"exact"},{"name":"downregulation of chemotaxis","type":"exact"},{"name":"inhibition of chemotaxis","type":"narrow"}],"termid":"GO:0050922"}


id: GO:0031367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of an amino group from the side chain of an N-terminal glutamine residue of a protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-glutamine deamination (obsolete GO:0031367)","termid":"GO:0031367"}


id: GO:0030328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of prenylcysteine, 3-methyl-2-buten-1-yl-cysteine, a derivative of the amino acid cysteine formed by the covalent addition of a prenyl residue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenylcysteine metabolic process","termid":"GO:0030329"},{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prenylcysteine catabolic process","synonyms":[{"name":"prenylcysteine breakdown","type":"exact"},{"name":"prenylcysteine catabolism","type":"exact"},{"name":"prenylcysteine degradation","type":"exact"}],"termid":"GO:0030328"}


id: PBO:0051120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-5 (non-functional)","termid":"PBO:0051120"}


id: MOD:00603
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 283 is redundant with Unimod 280. Remap to MOD:00600","definition_xrefs":["Unimod:283"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00603 N-ethylation (obsolete MOD:00603)","termid":"MOD:00603"}


id: PBO:0110349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMPK1 pseudogene 1","termid":"PBO:0110349"}


id: GO:0019456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown, via the compound cystine, of L-cysteine, catalyzed by the enzyme cysteine transaminase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process via cystine","termid":"GO:0019453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"L-cysteine catabolic process via cystine, using cysteine transaminase","synonyms":[{"name":"L-cysteine breakdown via cystine, using cysteine transaminase","type":"exact"},{"name":"L-cysteine degradation via cystine, using cysteine transaminase","type":"exact"}],"termid":"GO:0019456"}


id: PBO:0084980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent aldehyde reductase; reduces many aldehyde compounds including glycolaldehyde, formaldehyde and furfural; transcription unregulated by furfural, 5-hydroxymethylfurfural (HMF) and the mycotoxin patulin; expression increased by multidrug resistance transcription factors Yrm1p and Yrr1p; member of atypical subgroup 7 of the short-chain dehydrogenase/reductase (SDR) family; localizes to the cytoplasm; SWAT-GFP and mCherry fusion proteins localize to the ER and vacuole respectively","termid":"PBO:0084980"}


id: GO:0060383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of DNA strand elongation. DNA strand elongation is the DNA metabolic process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA metabolic process","termid":"GO:0051054"},{"relation_name":"is_a","term_name":"regulation of DNA strand elongation","termid":"GO:0060382"},{"relation_name":"positively_regulates","term_name":"DNA strand elongation","termid":"GO:0022616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA strand elongation","termid":"GO:0060383"}


id: MONDO:0001771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urethral stricture","termid":"MONDO:0002127"},{"relation_name":"is_a","term_name":"post-infectious disorder","termid":"MONDO:0021669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infective urethral stricture","secondary_identifiers":["MEDGEN:588592","SCTID:80375002","DOID:13658","UMLS:C0403696","ICD9:598.01","ICD9:136.9","ICD9:598.00"],"termid":"MONDO:0001771","xrefs":{"Monarch":{"xref_id":"0001771"}}}


id: PBO:0071958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 8","termid":"PBO:0071958"}


id: PR:Q9P7N6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mgr3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7N6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat-containing protein P27G11.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.02","synonyms":[{"name":"Spom972h-mgr3","type":"exact"}],"termid":"PR:Q9P7N6"}


id: PR:Q9P7Y2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein ACN9, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03084","PRO:DNx","PANTHER:PTHR13137:SF6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase assembly factor 3, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.03c","secondary_identifiers":["UniProtKB:Q9P7Y2"],"synonyms":[{"name":"SDH assembly factor 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SDHAF3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ACN9","type":"exact"}],"termid":"PR:Q9P7Y2"}


id: MONDO:0014549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lethal congenital contracture syndrome in which the cause of the disease is a mutation in the ZBTB42 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 6","secondary_identifiers":["OMIM:616248","UMLS:C4015686","MEDGEN:864123"],"synonyms":[{"name":"LCCS6","type":"related"},{"name":"ZBTB42 lethal congenital contracture syndrome","type":"exact"},{"name":"lethal congenital contracture syndrome 6","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in ZBTB42","type":"exact"},{"name":"lethal congenital contracture syndrome type 6","type":"exact"}],"termid":"MONDO:0014549","xrefs":{"Monarch":{"xref_id":"0014549"}}}


id: PBO:0054594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1997","termid":"PBO:0054594"}


id: PR:Q10489
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase E1 component subunit alpha, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.03","secondary_identifiers":["UniProtKB:Q10489"],"synonyms":[{"name":"PDHE1-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC26F1.03","type":"related"},{"name":"Spom972h-PDHA2","type":"exact"}],"termid":"PR:Q10489"}


id: PBO:0004182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"18S rRNA dimethylase (predicted)","termid":"PBO:0004182"}


id: MONDO:0010201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multicentric osteolysis-nodulosis-arthropathy spectrum","termid":"MONDO:0018298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Winchester syndrome","secondary_identifiers":["MEDGEN:98152","DOID:0080696","OMIM:277950","GARD:7894","SCTID:254151006","UMLS:C0432289","ICD9:733.29","MESH:C536709","NCIT:C170731"],"synonyms":[{"name":"Al-Qeel Sewairi syndrome","type":"related"},{"name":"MMP14-related multicentric osteolysis, nodulosis, and arthropathy","type":"exact"},{"name":"MONA, MMP14-related","type":"exact"},{"name":"NOA syndrome","type":"related"},{"name":"WNCHRS","type":"exact"},{"name":"Winchester syndrome","type":"exact"},{"name":"multicentric osteolysis, nodulosis and arthropathy","type":"related"},{"name":"multicentric osteolysis, nodulosis and arthropathy, MMP14-related","type":"exact"},{"name":"nodulosis arthropathy osteolysis syndrome","type":"related"}],"termid":"MONDO:0010201","xrefs":{"Monarch":{"xref_id":"0010201"}}}


id: PBO:0053251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX4 antisense RNA 1","termid":"PBO:0053251"}


id: MONDO:0009316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hair defect-photosensitivity-intellectual disability syndrome (obsolete MONDO:0009316)","termid":"MONDO:0009316","xrefs":{"Monarch":{"xref_id":"0009316"}}}


id: MONDO:0010514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to moesin deficiency","secondary_identifiers":["Orphanet:504530","UMLS:C5568123","DOID:0112001","GARD:17939","MEDGEN:1799546","OMIM:300988"],"synonyms":[{"name":"CID due to Moesin deficiency","type":"exact"},{"name":"IMD50","type":"exact"},{"name":"MSN-related combined immunodeficiency","type":"exact"},{"name":"X-linked Moesin-associated immunodeficiency","type":"exact"},{"name":"immunodeficiency 50","type":"exact"},{"name":"immunodeficiency 50, X-linked recessive","type":"related"},{"name":"immunodeficiency type 50","type":"exact"}],"termid":"MONDO:0010514","xrefs":{"Monarch":{"xref_id":"0010514"}}}


id: GO:0008423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the inactivation of bleomycin B2 (a cytotoxic glycometallopeptide) by hydrolysis of a peptide bond of beta-aminoalanine, but also shows general aminopeptidase activity. The specificity varies somewhat with source, but amino acid arylamides of Met, Leu and Ala are preferred.","definition_xrefs":["EC:3.4.22.40"],"gene_count":0,"genotype_count":0,"name":"obsolete bleomycin hydrolase activity (obsolete GO:0008423)","synonyms":[{"name":"aminopeptidase C (Lactococcus lactis)","type":"narrow"},{"name":"bleomycin hydrolase activity","type":"exact"}],"termid":"GO:0008423"}


id: PBO:0057046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 135a-1","termid":"PBO:0057046"}


id: PBO:0030535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_GDP_binding","termid":"PBO:0030535"}


id: PBO:0056239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mago homolog, exon junction complex subunit","termid":"PBO:0056239"}


id: FYPO:0003849
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing fluconazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0002058","FYPO:0000003","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on fluconazole","synonyms":[{"name":"normal cell population growth in presence of fluconazole","type":"exact"},{"name":"normal cell population growth on fluconazole","type":"exact"},{"name":"normal cellular response to fluconazole","type":"related"},{"name":"normal vegetative cell population growth on fluconazole","type":"exact"}],"termid":"FYPO:0003849"}


id: MONDO:0003196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the vermiform appendix","direct_ancestors":[{"relation_name":"is_a","term_name":"appendix cancer","termid":"MONDO:0001235"},{"relation_name":"is_a","term_name":"cecum carcinoma","termid":"MONDO:0006029"},{"relation_name":"is_a","term_name":"epithelial tumor of the appendix","termid":"MONDO:0018511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"appendix carcinoma","secondary_identifiers":["DOID:4902","UMLS:C0728951","NCIT:C9330","MEDGEN:196398","SCTID:448992002"],"synonyms":[{"name":"Ca appendix","type":"exact"},{"name":"appendix cancer","type":"broad"},{"name":"appendix carcinoma","type":"exact"},{"name":"carcinoma of appendix","type":"exact"},{"name":"carcinoma of the appendix","type":"exact"},{"name":"carcinoma of vermiform appendix","type":"exact"},{"name":"vermiform appendix carcinoma","type":"exact"}],"termid":"MONDO:0003196","xrefs":{"Monarch":{"xref_id":"0003196"}}}


id: GO:0098793
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a synapse that is part of the presynaptic cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynapse","synonyms":[{"name":"presynaptic terminal","type":"exact"}],"termid":"GO:0098793"}


id: GO:0004766
data:
  {"annotated_genes":["SJAG_04481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75193],"is_not":false,"summary":null,"term":"GO:0004766"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosylmethioninamine + putrescine = 5'-methylthioadenosine + spermidine.","definition_xrefs":["EC:2.5.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016765","GO:0003674"],"is_obsolete":false,"name":"spermidine synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:12721","Reactome:R-HSA-351215","MetaCyc:SPERMIDINESYN-RXN"],"synonyms":[{"name":"S-adenosylmethioninamine:putrescine 3-aminopropyltransferase activity","type":"related"},{"name":"SpeE","type":"related"},{"name":"aminopropyltransferase activity","type":"related"},{"name":"putrescine aminopropyltransferase activity","type":"related"},{"name":"spermidine synthetase activity","type":"related"}],"termid":"GO:0004766","terms_by_termid":{"GO:0004766":null}}


id: GO:0016538
data:
  {"annotated_genes":["SJAG_00439","SJAG_00973","SJAG_03699","SJAG_05978","SJAG_04140","SJAG_03618","SJAG_00613","SJAG_03525","SJAG_01716","SJAG_01210","SJAG_00100","SJAG_01213","SJAG_04614","SJAG_02057","SJAG_03591","SJAG_02404","SJAG_01401"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62468,70577,70988,71851,74169,79436,106625,108730],"is_not":false,"summary":null,"term":"GO:0016538"},{"annotations":[117467,113351,101966,111581,70665,80108,66373,74361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"},{"annotations":[109265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"}]},"cv_name":"molecular_function","definition":"Modulates the activity of a cyclin-dependent protein serine/threonine kinase, enzymes of the protein kinase family that are regulated through association with cyclins and other proteins.","definition_xrefs":["GOC:pr","GOC:rn","PMID:9442875","PMID:7877684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00439":null,"SJAG_00613":null,"SJAG_00973":null,"SJAG_01210":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_01716":null,"SJAG_02057":null,"SJAG_02404":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03618":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_04614":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"cyclin-dependent protein serine/threonine kinase regulator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0003753","Reactome:R-HSA-3215385","GO:0003752","GO:0003751"],"synonyms":[{"name":"G1/S-specific cyclin","type":"narrow"},{"name":"G2/M-specific cyclin","type":"narrow"},{"name":"cyclin","type":"broad"},{"name":"cyclin-dependent protein kinase regulator activity","type":"broad"},{"name":"cyclin-dependent protein kinase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0016538","terms_by_termid":{"GO:0004861":null,"GO:0016538":null,"GO:0061575":null}}


id: PBO:0005787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Snf22","termid":"PBO:0005787"}


id: PBO:0066259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX like 2","termid":"PBO:0066259"}


id: PBO:0088268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic histidine-tRNA ligase Hrs1","termid":"PBO:0088268"}


id: GO:0001060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of RNA from a DNA template by RNA polymerase V, originating at a Pol V-specific promoter.","definition_xrefs":["GOC:txnOH","PMID:19110459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"transcription by RNA polymerase V","synonyms":[{"name":"transcription from RNA pol V promoter","type":"exact"},{"name":"transcription from RNA polymerase V promoter","type":"exact"}],"termid":"GO:0001060"}


id: FYPO:0007317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translation in the cytoplasm is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased translation","termid":"FYPO:0001798"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic translation","termid":"FYPO:0003124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased cytoplasmic translation","synonyms":[{"name":"decreased cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"decreased cytoplasmic translation during vegetative growth","type":"exact"},{"name":"reduced cytoplasmic translation","type":"exact"}],"termid":"FYPO:0007317"}


id: PBO:0079850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-80 homolog, NALCN channel complex subunit","termid":"PBO:0079850"}


id: PBO:0029184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_trehalose_6-phosphate_level_during_heat_shock","termid":"PBO:0029184"}


id: PBO:0030742
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_morphology_during_nitrogen_starvation","termid":"PBO:0030742"}


id: PBO:0109191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh4","termid":"PBO:0109191"}


id: PBO:0085430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine oxidase; converts spermine to spermidine, which is required for the essential hypusination modification of translation factor eIF-5A; also involved in pantothenic acid biosynthesis","termid":"PBO:0085430"}


id: MONDO:1040036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by an autosomal dominant variant in the IMPG1 gene.","definition_xrefs":["PMID:36109576","PMID:32817297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0000426"],"is_obsolete":false,"name":"IMPG1-related dominant retinopathy","synonyms":[{"name":"IMPG1-related dominant retinopathy","type":"exact"}],"termid":"MONDO:1040036","xrefs":{"Monarch":{"xref_id":"1040036"}}}


id: GO:0009810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving stilbenes, a class of polyketides formed from a molecule of cinnamic acid and three molecules of malonyl-CoA.","definition_xrefs":["ISBN:3110116251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stilbene metabolic process","synonyms":[{"name":"stilbene metabolism","type":"exact"}],"termid":"GO:0009810"}


id: GO:0052835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 3,4,6-trisphosphate + ATP = 1D-myo-inositol 1,3,4,6-tetrakisphosphate + ADP + H+.","definition_xrefs":["PMID:11909533","RHEA:70287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol-3,4,6-trisphosphate 1-kinase activity","secondary_identifiers":["Reactome:R-HSA-1855169","MetaCyc:RXN-10984"],"synonyms":[{"name":"1D-myo-inositol-trisphosphate 1-kinase activity","type":"broad"},{"name":"IP3 1-kinase activity","type":"broad"},{"name":"Ins(3,4,6)P3 1-kinase activity","type":"related"},{"name":"inositol 3,4,6-trisphosphate 1-kinase activity","type":"exact"},{"name":"inositol-trisphosphate 1-kinase activity","type":"broad"},{"name":"ins(3,4,6)P(3) 1-kinase activity","type":"related"}],"termid":"GO:0052835"}


id: PBO:0047113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM161 centrosomal protein B","termid":"PBO:0047113"}


id: PBO:0001329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin Cnx1","termid":"PBO:0001329"}


id: GO:0061642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuron growth cone is directed to a specific target site in response to an attractive chemical signal.","definition_xrefs":["GOC:dph","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of axon","termid":"GO:0061642"}


id: GO:0140818
data:
  {"annotated_genes":["SJAG_04488"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99317],"is_not":false,"summary":null,"term":"GO:0140818"}]},"cv_name":"molecular_function","definition":"A 5'-end triphospho-[mRNA] + H2O = a 5'-end diphospho-[mRNA] + H+ + phosphate.","definition_xrefs":["PMID:9473487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0140098"],"is_obsolete":false,"name":"mRNA 5'-triphosphate monophosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:67004","EC:3.6.1.74","MetaCyc:POLYNUCLEOTIDE-5-PHOSPHATASE-RXN"],"synonyms":[{"name":"mRNA 5'-phosphatase activity","type":"exact"}],"termid":"GO:0140818","terms_by_termid":{"GO:0140818":null}}


id: GO:0009696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving of salicylic acid (2-hydroxybenzoic acid), a derivative of benzoic acid.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"salicylic acid metabolic process","synonyms":[{"name":"salicylic acid metabolism","type":"exact"}],"termid":"GO:0009696"}


id: PBO:0072882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET binding factor 1 pseudogene 1","termid":"PBO:0072882"}


id: GO:0033944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal non-reducing beta-D-galactofuranosides, releasing galactose.","definition_xrefs":["EC:3.2.1.146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"beta-galactofuranosidase activity","secondary_identifiers":["MetaCyc:3.2.1.146-RXN"],"synonyms":[{"name":"beta-D-galactofuranosidase activity","type":"related"},{"name":"beta-D-galactofuranoside hydrolase activity","type":"related"},{"name":"exo-beta-D-galactofuranosidase activity","type":"related"},{"name":"exo-beta-galactofuranosidase activity","type":"related"}],"termid":"GO:0033944"}


id: GO:0008125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins, including elastin. Preferential cleavage: Ala-Xaa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pancreatic elastase I activity (obsolete GO:0008125)","synonyms":[{"name":"elaszym","type":"related"},{"name":"pancreatic elastase I activity","type":"exact"},{"name":"pancreatopeptidase E activity","type":"related"},{"name":"serine elastase","type":"broad"}],"termid":"GO:0008125"}


id: PBO:0045723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 6","termid":"PBO:0045723"}


id: GO:1903471
data:
  {"annotated_genes":["SJAG_03581","SJAG_03631","SJAG_04597","SJAG_00845","SJAG_03936","SJAG_04776"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[87855,94744,110897,94914,113747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring contraction.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cell_cycle","PMID:1234","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actomyosin contractile ring contraction","termid":"GO:0031991"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"regulates","term_name":"mitotic actomyosin contractile ring contraction","termid":"GO:1902404"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03936":null,"SJAG_04597":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000281","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic actomyosin contractile ring contraction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"regulation of mitotic actomyosin contractile ring constriction","type":"exact"}],"termid":"GO:1903471","terms_by_termid":{"GO:1903472":null,"GO:1903473":null}}


id: GO:1901001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of response to salt stress.","definition_xrefs":["PMID:22627139","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to salt stress","termid":"GO:1901000"},{"relation_name":"negatively_regulates","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to salt stress","synonyms":[{"name":"down regulation of response to ionic osmotic stress","type":"exact"},{"name":"down regulation of response to salt stress","type":"exact"},{"name":"down regulation of salinity response","type":"exact"},{"name":"down-regulation of response to ionic osmotic stress","type":"exact"},{"name":"down-regulation of response to salt stress","type":"exact"},{"name":"down-regulation of salinity response","type":"exact"},{"name":"downregulation of response to ionic osmotic stress","type":"exact"},{"name":"downregulation of response to salt stress","type":"exact"},{"name":"downregulation of salinity response","type":"exact"},{"name":"inhibition of response to ionic osmotic stress","type":"exact"},{"name":"inhibition of response to salt stress","type":"narrow"},{"name":"inhibition of salinity response","type":"exact"},{"name":"negative regulation of response to ionic osmotic stress","type":"exact"},{"name":"negative regulation of salinity response","type":"exact"}],"termid":"GO:1901001"}


id: PBO:0112694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyldihydroxybenzoate methyltransferase Coq3","termid":"PBO:0112694"}


id: FYPO:0006117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid and has two or more septa.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"septated spheroid vegetative cell","termid":"FYPO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000032","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"multiseptate spheroid vegetative cell","synonyms":[{"name":"multiseptate rounded vegetative cell","type":"exact"}],"termid":"FYPO:0006117"}


id: MONDO:0010786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic diarrhea with villous atrophy is a rare, genetic gastroenterological disease characterized by the early onset of chronic diarrhea, vomiting, anorexia, lactic acidosis, renal insufficiency and hepatic involvement (mild elevation of liver enzymes, steatosis, hepatomegaly). Partial villous atrophy (with eosinophilic infiltration) is observed on intestinal biopsy. Although diarrhea may resolve, the development of neurologic symptoms (cerebellar ataxia, sensorineural deafness, seizures), retinitis pigmentosa and muscle weakness may complicate disease course and lead to death. There have been no further descriptions in the literature since 1994.","definition_xrefs":["Orphanet:1670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"chronic diarrhea with villous atrophy","secondary_identifiers":["GARD:16576","MESH:C564019","OMIM:520100","UMLS:C1838912","MEDGEN:325129","ICD10CM:K59.1"],"synonyms":[{"name":"diarrhea, chronic, with villous atrophy","type":"related"}],"termid":"MONDO:0010786","xrefs":{"Monarch":{"xref_id":"0010786"}}}


id: FYPO:0006701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of UMP measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular UMP level","synonyms":[{"name":"decreased cellular UMP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular UMP level during vegetative growth","type":"exact"},{"name":"reduced cellular UMP level","type":"exact"}],"termid":"FYPO:0006701"}


id: GO:0102495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A5 + O2 + 2-oxoglutarate = gibberellin A3 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete GA5 3beta-hydroxylase activity (obsolete GO:0102495)","termid":"GO:0102495"}


id: PBO:0058872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9983","termid":"PBO:0058872"}


id: PBO:0060281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 15","termid":"PBO:0060281"}


id: PBO:0044180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTNNBL1 pseudogene 1","termid":"PBO:0044180"}


id: GO:1901520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of aspyridone B.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"},{"relation_name":"is_a","term_name":"aspyridone B metabolic process","termid":"GO:1901519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"aspyridone B catabolic process","synonyms":[{"name":"aspyridone B breakdown","type":"exact"},{"name":"aspyridone B catabolism","type":"exact"},{"name":"aspyridone B degradation","type":"exact"}],"termid":"GO:1901520"}


id: PBO:0079913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 pseudogene 3","termid":"PBO:0079913"}


id: PBO:0071158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 23","termid":"PBO:0071158"}


id: PBO:0045540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual oxidase maturation factor 2","termid":"PBO:0045540"}


id: GO:0047153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dCMP + H2O = (6S)-5,6,7,8-tetrahydrofolate + 5-hydroxymethyldeoxycytidylate.","definition_xrefs":["RHEA:11280","EC:2.1.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"deoxycytidylate 5-hydroxymethyltransferase activity","secondary_identifiers":["MetaCyc:2.1.2.8-RXN","KEGG_REACTION:R01669"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate:deoxycytidylate 5-hydroxymethyltransferase activity","type":"related"},{"name":"d-cytidine 5'-monophosphate hydroxymethylase activity","type":"related"},{"name":"dCMP hydroxymethylase activity","type":"related"},{"name":"deoxyCMP hydroxymethylase activity","type":"related"},{"name":"deoxycytidylate hydroxymethylase activity","type":"related"},{"name":"deoxycytidylate hydroxymethyltransferase activity","type":"exact"},{"name":"deoxycytidylic hydroxymethylase activity","type":"related"}],"termid":"GO:0047153"}


id: MONDO:0018913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malakoplakia is a chronic multisystem granulomatous inflammatory disease characterized by the presence of single or multiple soft plaques on various organs of the body.","definition_xrefs":["Orphanet:556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"malakoplakia","secondary_identifiers":["MESH:D008287","NCIT:C84833","SCTID:716766007","GARD:6960","EFO:1001807","UMLS:C0024525","MEDGEN:44257"],"synonyms":[{"name":"malacoplakia","type":"related"}],"termid":"MONDO:0018913","xrefs":{"Monarch":{"xref_id":"0018913"}}}


id: PBO:0042906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1 pseudogene 3","termid":"PBO:0042906"}


id: PBO:0079544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like modifier activating enzyme 6","termid":"PBO:0079544"}


id: GO:2000378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of reactive oxygen species metabolic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of reactive oxygen species metabolic process","termid":"GO:2000377"},{"relation_name":"negatively_regulates","term_name":"reactive oxygen species metabolic process","termid":"GO:0072593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of reactive oxygen species metabolic process","synonyms":[{"name":"negative regulation of ROS metabolic process","type":"exact"},{"name":"negative regulation of reactive oxygen species metabolism","type":"exact"}],"termid":"GO:2000378"}


id: FYPO:0008405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abolished.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum","termid":"FYPO:0006377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum","termid":"FYPO:0008405"}


id: PBO:0086416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase; associates with free 60S ribosomal subunits in the nucleolus and is required for 60S ribosomal subunit biogenesis; constituent of 66S pre-ribosomal particles; member of the ODN family of nucleolar G-proteins","termid":"PBO:0086416"}


id: MONDO:0011810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Horizontal gaze palsy with progressive scoliosis (HGPPS) is a rare congenital autosomal recessive disease, presenting in children and adolescents, and characterized by progressive scoliosis along with the absence of conjugate horizontal eye movements and associated with failure of the somatosensory and corticospinal neuronal tracts to decussate in the medulla.","definition_xrefs":["Orphanet:2744"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horizontal gaze palsy with progressive scoliosis","secondary_identifiers":["ICD9:737.43","GARD:12682","SCTID:702381007","OMIMPS:607313","icd11.foundation:226403142","MEDGEN:1683615","UMLS:C4760875","ICD10CM:H49.4","MESH:C564593"],"synonyms":[{"name":"HGPPS","type":"exact"},{"name":"gaze palsy, familial horizontal, with progressive scoliosis","type":"related"},{"name":"gaze palsy, horizontal, with progressive scoliosis","type":"related"},{"name":"ophthalmoplegia, progressive external, and scoliosis","type":"related"},{"name":"progressive external ophthalmoplegia and scoliosis","type":"exact"}],"termid":"MONDO:0011810","xrefs":{"Monarch":{"xref_id":"0011810"}}}


id: PBO:0043526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 7","termid":"PBO:0043526"}


id: PBO:0086812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YJR115W has a paralog, ECM13, that arose from the whole genome duplication","termid":"PBO:0086812"}


id: MONDO:0003625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0003625 (obsolete MONDO:0003625)","termid":"MONDO:0003625","xrefs":{"Monarch":{"xref_id":"0003625"}}}


id: PBO:0043870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP responsive element binding protein 1","termid":"PBO:0043870"}


id: MONDO:0006823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sex chromosome disorder caused by the presence of an extra X chromosome in the male karyotype. Affected individuals are infertile and have a small penis and testes. They tend to have tall stature and long legs and may have difficulties with speech and language development. Gynecomastia may be present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"sex chromosome disorder of sex development","termid":"MONDO:0017975"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Klinefelter syndrome","secondary_identifiers":["MESH:D007713","EFO:1001006","SCTID:405769009","icd11.foundation:1937385304","MedDRA:10023463","NANDO:2200386","NCIT:C34752","DOID:1921","ICD9:758.7","MEDGEN:44033","UMLS:C0022735"],"synonyms":[{"name":"47,XXY syndrome","type":"exact"},{"name":"Klinefelter syndrome","type":"exact"},{"name":"Klinefelter's syndrome","type":"exact"},{"name":"Klinefelter's syndrome, XXY","type":"exact"},{"name":"XXY syndrome","type":"exact"},{"name":"XXY syndrome (Klinefelter syndrome)","type":"exact"},{"name":"XXY trisomy","type":"exact"},{"name":"hypogonadotropic hypogonadism","type":"related"}],"termid":"MONDO:0006823","xrefs":{"Monarch":{"xref_id":"0006823"}}}


id: PBO:0042802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline/ethanolamine phosphotransferase 1","termid":"PBO:0042802"}


id: FYPO:0001847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ferric-chelate reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abnormal ferric-chelate reductase activity","termid":"FYPO:0001847"}


id: GO:0019027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A RNA genome that contains coding regions that are either positive sense or negative sense on the same RNA molecule.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete ambisense viral genome (obsolete GO:0019027)","termid":"GO:0019027"}


id: PBO:0027891
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_kinetochore_during_meiosis_I","termid":"PBO:0027891"}


id: GO:0150057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A G protein-coupled receptor complex that serves as a receptor for amylin polypeptide (AMY) and consists of a calcitonin receptor (CTR/CALCR) and a receptor activity-modifying protein (RAMP) 2. Amylin receptor complex 2 (AMY2) also serves as a receptor for adrenomedullin (AM/ADM).","definition_xrefs":["GOC:bc","PMID:22500019","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor complex","termid":"GO:1903440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"amylin receptor complex 2","synonyms":[{"name":"AMY2 complex","type":"exact"}],"termid":"GO:0150057"}


id: PBO:0082178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor GTPase activating protein (ARF GAP); involved in ER-Golgi transport; required for prospore membrane formation; regulates phospholipase Spo14p; shares functional similarity with Glo3p; GCS1 has a paralog, SPS18, that arose from the whole genome duplication","termid":"PBO:0082178"}


id: GO:0043024
data:
  {"annotated_genes":["SJAG_03658","SJAG_02061","SJAG_05000","SJAG_01117"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74854,77852,99783,103874],"is_not":false,"summary":null,"term":"GO:0043024"}]},"cv_name":"molecular_function","definition":"Binding to a small ribosomal subunit.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosome binding","termid":"GO:0043022"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01117":null,"SJAG_02061":null,"SJAG_03658":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ribosomal small subunit binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043024","terms_by_termid":{"GO:0043024":null}}


id: PBO:0001388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in potassium ion transport Mdm28 (predicted)","termid":"PBO:0001388"}


id: PBO:0051101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-8","termid":"PBO:0051101"}


id: MONDO:0003410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cervical adenocarcinoma that arises from mesonephric remnants. It is usually characterized by the presence of tubular glands lined by cuboidal epithelial cells.","definition_xrefs":["NCIT:C40254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"},{"relation_name":"is_a","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"},{"relation_name":"is_a","term_name":"mesonephric adenocarcinoma","termid":"MONDO:0005613"},{"relation_name":"is_a","term_name":"mesonephric neoplasm","termid":"MONDO:0024888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"Wolffian duct adenocarcinoma","secondary_identifiers":["MEDGEN:273908","DOID:5368","UMLS:C1516419"],"synonyms":[{"name":"Wolffian duct adenocarcinoma","type":"exact"},{"name":"cervical mesonephric adenocarcinoma","type":"exact"},{"name":"mesonephric duct adenocarcinoma","type":"exact"}],"termid":"MONDO:0003410","xrefs":{"Monarch":{"xref_id":"0003410"}}}


id: PBO:0014247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational activator, zf-CCHC type zinc finger protein (predicted)","termid":"PBO:0014247"}


id: PBO:0068832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 70, pseudogene","termid":"PBO:0068832"}


id: PR:Q9P7H8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome-associated protein ECM29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome component ecm29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.01","secondary_identifiers":["UniProtKB:Q9P7H8"],"synonyms":[{"name":"SPAC1782.01","type":"related"},{"name":"Spom972h-ECM29","type":"exact"}],"termid":"PR:Q9P7H8"}


id: PBO:0069750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1032, pseudogene","termid":"PBO:0069750"}


id: GO:0039544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by a virus resulting in the hydrolysis of the host RIG-I protein (also known as DDX58) by cleavage of peptide bonds, thereby inhibiting RIG-I signal transduction.","definition_xrefs":["PMID:19628239"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host RIG-I activity by RIG-I proteolysis (obsolete GO:0039544)","synonyms":[{"name":"cleavage of RIG-I by viral proteinase","type":"exact"},{"name":"inhibition by virus of host RIG-I activity by RIG-I proteolysis","type":"related"}],"termid":"GO:0039544"}


id: GO:1903995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of non-membrane spanning protein tyrosine kinase activity.","definition_xrefs":["GOC:BHF","GOC:nc","GOC:TermGenie","PMID:10518561","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of non-membrane spanning protein tyrosine kinase activity (obsolete GO:1903995)","synonyms":[{"name":"regulation of ATP:protein-L-tyrosine O-phosphotransferase (non-specific) activity","type":"exact"},{"name":"regulation of ATP:protein-tyrosine O-phosphotransferase activity","type":"broad"},{"name":"regulation of Bruton's tyrosine kinase activity","type":"narrow"},{"name":"regulation of cytoplasmic protein tyrosine kinase activity","type":"narrow"},{"name":"regulation of focal adhesion kinase activity","type":"narrow"},{"name":"regulation of janus kinase 1 activity","type":"narrow"},{"name":"regulation of janus kinase 2 activity","type":"narrow"},{"name":"regulation of janus kinase 3 activity","type":"narrow"},{"name":"regulation of non-specific protein-tyrosine kinase activity","type":"exact"},{"name":"regulation of p60c-src protein tyrosine kinase activity","type":"narrow"}],"termid":"GO:1903995"}


id: GO:0018773
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73217],"is_not":false,"summary":null,"term":"GO:0018773"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetylpyruvate + H2O = acetate + H+ + pyruvate.","definition_xrefs":["RHEA:16097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"acetylpyruvate hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.7.1.6","KEGG_REACTION:R00324","MetaCyc:ACETYLPYRUVATE-HYDROLASE-RXN","UM-BBD_reactionID:r0095"],"synonyms":[{"name":"2,4-dioxopentanoate acetylhydrolase activity","type":"related"}],"termid":"GO:0018773","terms_by_termid":{"GO:0018773":null}}


id: GO:0047660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-amidino-L-aspartate + H2O = L-aspartate + urea.","definition_xrefs":["RHEA:14849","EC:3.5.3.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"amidinoaspartase activity","secondary_identifiers":["KEGG_REACTION:R00777","MetaCyc:AMIDINOASPARTASE-RXN"],"synonyms":[{"name":"N-amidino-L-aspartate amidinohydrolase activity","type":"related"},{"name":"amidinoaspartic amidinohydrolase activity","type":"related"}],"termid":"GO:0047660"}


id: GO:0043508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of JUN kinase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAP kinase activity","termid":"GO:0043407"},{"relation_name":"is_a","term_name":"regulation of JUN kinase activity","termid":"GO:0043506"},{"relation_name":"is_a","term_name":"negative regulation of JNK cascade","termid":"GO:0046329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of JUN kinase activity","synonyms":[{"name":"down regulation of JNK activity","type":"exact"},{"name":"down-regulation of JNK activity","type":"exact"},{"name":"downregulation of JNK activity","type":"exact"},{"name":"inhibition of JNK activity","type":"narrow"},{"name":"negative regulation of JUNK activity","type":"exact"}],"termid":"GO:0043508"}


id: PBO:0057665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1256","termid":"PBO:0057665"}


id: MONDO:0004847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract with no obvious cause occurring in persons over 50 years old.","direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"senile cataract","secondary_identifiers":["SCTID:39450006","DOID:9669","MEDGEN:11372","NCIT:C35012","UMLS:C0036646","ICD9:366.1","ICD9:366.10"],"termid":"MONDO:0004847","xrefs":{"Monarch":{"xref_id":"0004847"}}}


id: GO:0002010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the molecular signal from the arterial baroreceptors is relayed to the vasomotor center causing it to signal increase arterial pressure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"baroreceptor response to decreased systemic arterial blood pressure","termid":"GO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"excitation of vasomotor center by baroreceptor signaling","synonyms":[{"name":"excitation of vasomotor center by baroreceptor signalling","type":"exact"}],"termid":"GO:0002010"}


id: GO:0052158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a symbiont modulates the frequency, rate or extent of the resistance gene-dependent defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defenses","termid":"GO:0030682"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host resistance gene-dependent defense response","secondary_identifiers":["GO:0052297"],"synonyms":[{"name":"modulation by organism of defense response in host by specific elicitors","type":"exact"},{"name":"modulation by organism of host gene-for-gene resistance","type":"exact"},{"name":"modulation by organism of pathogen-race/host plant cultivar-specific resistance in symbiont","type":"exact"},{"name":"modulation by organism of resistance gene-dependent defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of host resistance gene-dependent defense response","type":"exact"}],"termid":"GO:0052158"}


id: PBO:0043085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic delta subunit","termid":"PBO:0043085"}


id: SO:0002202
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat region that is prone to expansions and/or contractions.","direct_ancestors":[{"relation_name":"is_a","term_name":"tandem_repeat","termid":"SO:0000705"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repeat_instability_region","synonyms":[{"name":"INSDC_feature:misc_feature","type":"broad"},{"name":"INSDC_note:repeat_instability_region","type":"exact"},{"name":"repeat instability region","type":"exact"}],"termid":"SO:0002202"}


id: PBO:0071478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 19","termid":"PBO:0071478"}


id: PBO:0005856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf18","termid":"PBO:0005856"}


id: GO:1990352
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex composed of the E3 ubiquitin-protein ligase BRE1. Plays a role in regulating association of RNA polymerase II with active genes.","definition_xrefs":["PMID:19531475","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BRE1 E3 ubiquitin ligase complex","synonyms":[{"name":"BRE1 E3 ubiquitin-protein ligase complex","type":"exact"},{"name":"BRE1 oligomer","type":"exact"}],"termid":"GO:1990352"}


id: PBO:0089438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRC ubiquitin ligase complex subunit Raf2","termid":"PBO:0089438"}


id: PBO:0055088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2506","termid":"PBO:0055088"}


id: GO:0061339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of monopolar intracellular organization or cell growth patterns. Monopolar cell organization is directional organization along an axis.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment or maintenance of monopolar cell polarity","termid":"GO:0061339"}


id: FYPO:0002991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the G1/S transition of the mitotic cell cycle begins earlier than normal, during a cellular response to hydrogen peroxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premature mitotic G1/S phase transition","termid":"FYPO:0000398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"premature mitotic G1/S phase transition during cellular response to hydrogen peroxide","synonyms":[{"name":"advanced mitotic G1/S phase transition during cellular response to hydrogen peroxide","type":"exact"},{"name":"premature G1/S phase transition during cellular response to hydrogen peroxide during mitotic cell cycle","type":"exact"},{"name":"premature cell cycle progression through mitotic G1/S phase transition during cellular response to hydrogen peroxide","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to H2O2","type":"exact"},{"name":"premature mitotic G1/S phase transition during cellular response to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0002991"}


id: PBO:0051111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-67 (pseudogene)","termid":"PBO:0051111"}


id: GO:0052121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a chemical on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis in host environment (obsolete GO:0052121)","synonyms":[{"name":"positive chemotaxis in response to host environment","type":"exact"}],"termid":"GO:0052121"}


id: GO:0047777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S)-citramalyl-CoA = acetyl-CoA + pyruvate.","definition_xrefs":["EC:4.1.3.25","RHEA:22612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"(S)-citramalyl-CoA lyase activity","secondary_identifiers":["MetaCyc:CITRAMALYL-COA-LYASE-RXN","KEGG_REACTION:R00237"],"synonyms":[{"name":"(+)-CMA-CoA lyase activity","type":"related"},{"name":"(3S)-citramalyl-CoA lyase activity","type":"related"},{"name":"(3S)-citramalyl-CoA pyruvate-lyase (acetyl-CoA-forming)","type":"related"},{"name":"(3S)-citramalyl-CoA pyruvate-lyase activity","type":"related"},{"name":"citramalyl coenzyme A lyase activity","type":"related"},{"name":"citramalyl-CoA lyase activity","type":"broad"}],"termid":"GO:0047777"}


id: GO:1990504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The secretion of molecules (e.g. neuropeptides, insulin-related peptides or neuromodulators such as serotonin and dopamine) contained within a membrane-bounced dense core granule by fusion of the granule with the plasma membrane of a cell in response to increased cytosolic calcium levels.","definition_xrefs":["PMID:17553987","PMID:24653208","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"},{"relation_name":"is_a","term_name":"dense core granule localization","termid":"GO:0032253"},{"relation_name":"is_a","term_name":"establishment of vesicle localization","termid":"GO:0051650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"dense core granule exocytosis","synonyms":[{"name":"dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1990504"}


id: PBO:0087326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorbitol dehydrogenase; protein sequence is 99% identical to the Sor1p sorbitol dehydrogenase","termid":"PBO:0087326"}


id: MONDO:0005009
data:
  {"annotated_genes":["SJAG_04757","SJAG_03866"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86966,86967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009935"}]},"cv_name":"mondo","definition":"Failure of the heart to pump a sufficient amount of blood to meet the needs of the body tissues, resulting in tissue congestion and edema. Signs and symptoms include shortness of breath, pitting edema, enlarged tender liver, engorged neck veins, and pulmonary rales.","definition_xrefs":["NCIT:C3080"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart failure","termid":"MONDO:0005252"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03866":null,"SJAG_04757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congestive heart failure","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:2136808878","ICD9:428.9","ICD9:404.13","MEDGEN:9169","EFO:0000373","ICD9:404.01","HP:0001635","ICD9:404.11","SCTID:42343007","UMLS:C0018802","ICD9:428.0","ICD9:428","DOID:6000"],"synonyms":[{"name":"CHF","type":"exact"},{"name":"cardiac failure, congestive","type":"exact"},{"name":"congestive heart disease","type":"exact"},{"name":"failure, congestive heart","type":"exact"},{"name":"heart failure, congestive","type":"exact"},{"name":"weak heart","type":"exact"}],"termid":"MONDO:0005009","terms_by_termid":{"MONDO:0009935":null},"xrefs":{"Monarch":{"xref_id":"0005009"}}}


id: PR:O14320
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coa1 gene.","definition_xrefs":["UniProtKB:O14320","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.03c","synonyms":[{"name":"Spom972h-coa1","type":"exact"}],"termid":"PR:O14320"}


id: MONDO:0016248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of ovarian cancer that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited gynecological tumor (obsolete MONDO:0015981)","termid":"MONDO:0015981"},{"relation_name":"excluded_subClassOf","term_name":"malignant non-epithelial tumor of ovary","termid":"MONDO:0018365"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"familial ovarian cancer","secondary_identifiers":["icd11.foundation:1484739866","GARD:20467","Orphanet:213517","MEDGEN:1803368","UMLS:C5679802"],"synonyms":[{"name":"familial ovarian cancer","type":"exact"},{"name":"familial ovarian malignant tumor","type":"exact"},{"name":"familial ovarian malignant tumour","type":"exact"},{"name":"hereditary ovarian cancer","type":"exact"}],"termid":"MONDO:0016248","xrefs":{"Monarch":{"xref_id":"0016248"}}}


id: FYPO:0008029
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119507],"is_not":false,"summary":null,"term":"FYPO:0008029"}]},"cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed during fungal hyphal growth phase in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost.","definition_xrefs":["PMID:36058798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell lysis","termid":"FYPO:0002488"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"cell lysis during hyphal growth phase","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"termid":"FYPO:0008029","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0008029":null}}


id: MONDO:0010649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated congenital megalocornea is a genetic, non-syndromic developmental defect of the anterior eye segment characterized by bilateral enlargement of the corneal diameter (>12.5 mm) and a deep anterior eye chamber, without an elevation in intraocular pressure. It can manifest with mild to moderate myopia as well as photophobia and iridodonesis (due to iris hypoplasia). Associated complications include lens dislocation, retinal detachment, presenile cataract development, and secondary glaucoma.","definition_xrefs":["Orphanet:91489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megalocornea","termid":"MONDO:0009576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated congenital megalocornea","secondary_identifiers":["OMIM:309300","MEDGEN:1385311","GARD:12648","UMLS:C4518341","SCTID:734026006"],"synonyms":[{"name":"MGC1","type":"related"},{"name":"Mgcn","type":"related"},{"name":"congenital anterior megalophthalmia","type":"exact"},{"name":"isolated congenital megalocornea","type":"exact"},{"name":"megalocornea","type":"related"},{"name":"megalocornea 1, X-linked, X-linked recessive","type":"exact"}],"termid":"MONDO:0010649","xrefs":{"Monarch":{"xref_id":"0010649"}}}


id: GO:0019392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glucarate, the dianion of glucaric acid, an aldaric acid derived from either glucose or gulose. There are two enantiomers L- and D-glucarate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glucarate metabolic process","secondary_identifiers":["GO:0019581"],"synonyms":[{"name":"glucarate metabolism","type":"exact"}],"termid":"GO:0019392"}


id: GO:0140868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3 H+ + 15-cis-4,4'-diapophytoene + 3 FAD = 4,4'-diapolycopene + 3 FADH2. This reaction consists of three successive dehydrogenations that lead to the introduction of three double bonds into 4,4'-diapophytoene (dehydrosqualene), with 4,4'-diapophytofluene and 4,4'-diapo-zeta-carotene as intermediates, and 4,4'-diaponeurosporene (the major deep-yellow pigment in staphylococci strains) as the end product.","definition_xrefs":["PMID:15933032"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,4'-diapophytoene desaturase (4,4'-diapolycopene-forming) (obsolete GO:0140868)","synonyms":[{"name":"4,4'-diapophytoene desaturase activity","type":"broad"}],"termid":"GO:0140868"}


id: PBO:0090559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall alpha-1,3-glucan synthase Mok13","termid":"PBO:0090559"}


id: PBO:0055851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 1B","termid":"PBO:0055851"}


id: SO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory element that acts in response to a stimulus, usually via transcription factor binding.","direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"response_element","synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:response_element","type":"exact"},{"name":"response element","type":"exact"}],"termid":"SO:0002205"}


id: GO:0014855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of striated muscle cells, resulting in the expansion of a cell population. Striated muscles contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle.","definition_xrefs":["GOC:ef","CL:0000737","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell proliferation","termid":"GO:0033002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle cell proliferation","termid":"GO:0014855"}


id: MONDO:0008171
data:
  {"annotated_genes":["SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86828,86827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020722"}]},"cv_name":"mondo","definition":"The presence of a calculus in the pelvis of the kidney; this is most often composed of mineral salts and proteins.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"urolithiasis","termid":"MONDO:0024647"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrolithiasis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0392525","ICD9:592","MEDGEN:98227","MESH:D053040","SCTID:266556005","DOID:585","EFO:0004253","NCIT:C114667"],"synonyms":[{"name":"CAON","type":"related"},{"name":"Stone - kidney/ureter","type":"exact"},{"name":"calculus of kidney and ureter","type":"exact"},{"name":"kidney stone","type":"exact"},{"name":"kidney stones","type":"exact"},{"name":"nephrolithiasis, calcium oxalate","type":"related"},{"name":"renal calculi","type":"exact"},{"name":"urolithiasis, calcium oxalate","type":"related"}],"termid":"MONDO:0008171","terms_by_termid":{"MONDO:0020722":null},"xrefs":{"Monarch":{"xref_id":"0008171"}}}


id: FYPO:0006067
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule, does not occur.","definition_xrefs":["PMID:22696680","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule polymerization during vegetative growth","termid":"FYPO:0004614"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished microtubule polymerization","synonyms":[{"name":"abolished microtubule catastrophe","type":"related"},{"name":"abolished microtubule polymerisation","type":"exact"},{"name":"abolished microtubule polymerization","type":"related"},{"name":"abolished microtubule polymerization during mitotic cell cycle","type":"related"},{"name":"abolished microtubule polymerization during vegetative growth","type":"exact"},{"name":"abolished microtubule shrinkage","type":"related"},{"name":"microtubule polymerization abolished","type":"exact"}],"termid":"FYPO:0006067"}


id: PBO:0030205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_multinucleate_vegetative_cell","termid":"PBO:0030205"}


id: PBO:0049800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex P5B","termid":"PBO:0049800"}


id: GO:1903344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein polyglycylation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein polyglycylation","termid":"GO:0018094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein polyglycylation","termid":"GO:1903344"}


id: GO:1905396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a flavonoid stimulus.","definition_xrefs":["PMID:22700048","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to flavonoid","termid":"GO:1905395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to flavonoid","termid":"GO:1905396"}


id: PBO:0045713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 1","termid":"PBO:0045713"}


id: GO:0008636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of the activity of a caspase, a group of cysteine proteases involved in apoptosis, by the addition of a phosphate group.","definition_xrefs":["GOC:jl","GOC:dph","PMID:14744432","Wikipedia:Caspase","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of caspase activity by protein phosphorylation (obsolete GO:0008636)","synonyms":[{"name":"activation of caspase activity by protein amino acid phosphorylation","type":"exact"},{"name":"activation of caspase activity by protein phosphorylation","type":"exact"},{"name":"caspase activation via phosphorylation","type":"exact"}],"termid":"GO:0008636"}


id: PBO:0003324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCN5-related N-acetyltransferase (predicted)","termid":"PBO:0003324"}


id: PBO:0072691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX family transcription factor 2","termid":"PBO:0072691"}


id: PBO:0029571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spore_population","termid":"PBO:0029571"}


id: PBO:0054238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1620","termid":"PBO:0054238"}


id: SO:0001392
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified threonine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_threonine","secondary_identifiers":["MOD:00917"],"synonyms":[{"name":"ModThr","type":"exact"},{"name":"modified L threonine","type":"exact"},{"name":"modified L-threonine","type":"exact"}],"termid":"SO:0001392"}


id: MONDO:0016289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that involves the uterine cervix.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical cancer","termid":"MONDO:0002974"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant germ cell tumor of cervix uteri","secondary_identifiers":["GARD:20501","UMLS:C4750752","Orphanet:213837","ICD10CM:C53.0","MEDGEN:1662294"],"synonyms":[{"name":"cervical germ cell cancer","type":"exact"},{"name":"cervical malignant germ cell tumor","type":"exact"},{"name":"cervical malignant germ cell tumour","type":"exact"},{"name":"germ cell cancer of cervix uteri","type":"exact"},{"name":"germ cell cancer of the cervix uteri","type":"exact"},{"name":"malignant germ cell tumor of the cervix uteri","type":"related"},{"name":"malignant germ cell tumour of the cervix uteri","type":"related"},{"name":"uterine cervix malignant germ cell tumor","type":"exact"},{"name":"uterine cervix malignant germ cell tumour","type":"exact"}],"termid":"MONDO:0016289","xrefs":{"Monarch":{"xref_id":"0016289"}}}


id: GO:0033789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 1,4-benzoquinone + H2O + phenylacetyl-CoA = 2 hydroquinone + phenylglyoxylyl-CoA.","definition_xrefs":["RHEA:15705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor","termid":"GO:0033695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"phenylacetyl-CoA dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R07222","MetaCyc:1.17.5.1-RXN","EC:1.17.5.1"],"synonyms":[{"name":"phenylacetyl-CoA:acceptor oxidoreductase activity","type":"related"},{"name":"phenylacetyl-CoA:quinone oxidoreductase activity","type":"related"}],"termid":"GO:0033789"}


id: GO:0001509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins and small-molecule substrates at Asn-Xaa bonds.","definition_xrefs":["EC:3.4.22.34"],"gene_count":0,"genotype_count":0,"name":"obsolete legumain activity (obsolete GO:0001509)","synonyms":[{"name":"PRSC1 gene product (Homo sapiens)","type":"related"},{"name":"asparaginyl endopeptidase activity","type":"related"},{"name":"bean endopeptidase activity","type":"related"},{"name":"citvac","type":"related"},{"name":"hemoglobinase activity","type":"related"},{"name":"legumain activity","type":"exact"},{"name":"phaseolin activity","type":"related"},{"name":"proteinase B","type":"related"},{"name":"vicilin peptidohydrolase activity","type":"related"}],"termid":"GO:0001509"}


id: GO:0034454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell by attachment to a centrosome.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule anchoring at microtubule organizing center","termid":"GO:0072393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"microtubule anchoring at centrosome","termid":"GO:0034454"}


id: PBO:0061859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 3","termid":"PBO:0061859"}


id: PBO:0005442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene A-4 hydrolase (predicted)","termid":"PBO:0005442"}


id: GO:0140141
data:
  {"annotated_genes":["SJAG_02445"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94550],"is_not":false,"summary":null,"term":"GO:0140141"}]},"cv_name":"biological_process","definition":"The process in which a potassium ion is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:20197279","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02445":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mitochondrial potassium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140141","terms_by_termid":{"GO:0140141":null}}


id: GO:0140819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of UDP-beta-L-arabinofuranose from one side of a membrane to the other.","definition_xrefs":["PMID:28373556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"UDP-beta-L-arabinofuranose transporter activity","termid":"GO:0140819"}


id: MONDO:0008925
data:
  {"annotated_genes":["SJAG_01745"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86322],"is_not":false,"summary":null,"term":"MONDO:0008925"}]},"cv_name":"mondo","definition":"Any early-onset non-syndromic cataract in which the cause of the disease is a mutation in the LEMD2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset non-syndromic cataract","termid":"MONDO:0011060"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 46 juvenile-onset","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:98987","UMLS:C0220721","DOID:0110243","OMIM:212500","MESH:C538286","GARD:1150","MEDGEN:113102"],"synonyms":[{"name":"CTRCT46","type":"exact"},{"name":"LEMD2 early-onset non-syndromic cataract","type":"exact"},{"name":"cataract 46, juvenile-onset","type":"related"},{"name":"cataract Hutterite type","type":"related"},{"name":"cataract, congenital or juvenile","type":"related"},{"name":"cataract, juvenile, Hutterite type","type":"related"},{"name":"early-onset non-syndromic cataract caused by mutation in LEMD2","type":"exact"},{"name":"juvenilae cataract Hutterite type","type":"exact"}],"termid":"MONDO:0008925","terms_by_termid":{"MONDO:0008925":null},"xrefs":{"Monarch":{"xref_id":"0008925"}}}


id: GO:0097159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an organic cyclic compound, any molecular entity that contains carbon arranged in a cyclic molecular structure.","definition_xrefs":["PMID:7583672","GOC:sjw"],"gene_count":0,"genotype_count":0,"name":"obsolete organic cyclic compound binding (obsolete GO:0097159)","secondary_identifiers":["Reactome:R-HSA-1497796"],"termid":"GO:0097159"}


id: PBO:0076569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3J, pseudogene","termid":"PBO:0076569"}


id: GO:0009640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The control of plant growth, development, and differentiation by the duration and nature of light, independent of photosynthesis.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"},{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photomorphogenesis","secondary_identifiers":["Wikipedia:Photomorphogenesis"],"synonyms":[{"name":"plant development in response to light","type":"exact"}],"termid":"GO:0009640"}


id: PBO:0074212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 43 member 1","termid":"PBO:0074212"}


id: GO:0030091
data:
  {"annotated_genes":["SJAG_00419","SJAG_00365","SJAG_01628"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65874,95898,113847],"is_not":false,"summary":null,"term":"GO:0030091"}]},"cv_name":"biological_process","definition":"The process of restoring a protein to its original state after damage by such things as oxidation or spontaneous decomposition of residues.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00365":null,"SJAG_00419":null,"SJAG_01628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein repair","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5676934"],"termid":"GO:0030091","terms_by_termid":{"GO:0030091":null}}


id: PBO:0003081
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Hsf1","termid":"PBO:0003081"}


id: PBO:0116638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF guanine nucleotide exchange factor 1","termid":"PBO:0116638"}


id: SO:0000647
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a micro RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA_primary_transcript","secondary_identifiers":["SO:0000648"],"synonyms":[{"name":"miRNA primary transcript","type":"exact"},{"name":"micro RNA primary transcript","type":"exact"},{"name":"small temporal RNA primary transcript","type":"exact"},{"name":"stRNA primary transcript","type":"exact"},{"name":"stRNA_primary_transcript","type":"exact"}],"termid":"SO:0000647"}


id: PBO:0051066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 4-23 (non-functional)","termid":"PBO:0051066"}


id: MONDO:0008651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebral hypoplasia with lumbar kyphosis","secondary_identifiers":["OMIM:192900","MEDGEN:348622","MESH:C566002","UMLS:C1860463"],"synonyms":[{"name":"vertebral hypoplasia with lumbar kyphosis","type":"exact"}],"termid":"MONDO:0008651","xrefs":{"Monarch":{"xref_id":"0008651"}}}


id: PBO:0078449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 2","termid":"PBO:0078449"}


id: GO:1905004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of picolinic acid.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","GO_REF:0000068","PMID:19843166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"},{"relation_name":"is_a","term_name":"picolinic acid metabolic process","termid":"GO:1905003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"picolinic acid biosynthetic process","synonyms":[{"name":"picolinate biosynthesis","type":"exact"},{"name":"picolinate biosynthetic process","type":"exact"},{"name":"picolinic acid anabolism","type":"exact"},{"name":"picolinic acid biosynthesis","type":"exact"},{"name":"picolinic acid formation","type":"exact"},{"name":"picolinic acid synthesis","type":"exact"}],"termid":"GO:1905004"}


id: RO:0002170
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a is connected to b if and only if a and b are discrete structure, and there exists some connecting structure c, such that c connects a and b","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connected_to","termid":"RO:0002170"}


id: GO:1901863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle tissue development.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:23150719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"positively_regulates","term_name":"muscle tissue development","termid":"GO:0060537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle tissue development","synonyms":[{"name":"activation of muscle tissue development","type":"narrow"},{"name":"up regulation of muscle tissue development","type":"exact"},{"name":"up-regulation of muscle tissue development","type":"exact"},{"name":"upregulation of muscle tissue development","type":"exact"}],"termid":"GO:1901863"}


id: GO:0018974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene, a highly explosive pale yellow crystalline solid. It is prepared from toluene treated with concentrated sulfuric and nitric acids and is used in shells, bombs, and blasting explosives.","definition_xrefs":["ISBN:0333781767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trinitrotoluene metabolic process","termid":"GO:0018973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2,4,6-trinitrotoluene metabolic process","synonyms":[{"name":"2,4,6-trinitrotoluene metabolism","type":"exact"},{"name":"TNT metabolic process","type":"exact"},{"name":"TNT metabolism","type":"exact"}],"termid":"GO:0018974"}


id: GO:1901466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ferulate catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"ferulate catabolic process","termid":"GO:1901067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of ferulate catabolic process","synonyms":[{"name":"regulation of ferulate breakdown","type":"exact"},{"name":"regulation of ferulate catabolism","type":"exact"},{"name":"regulation of ferulate degradation","type":"exact"}],"termid":"GO:1901466"}


id: PBO:0110374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSPBAP1 pseudogene 1","termid":"PBO:0110374"}


id: GO:2000242
data:
  {"annotated_genes":["SJAG_01311","SJAG_01330","SJAG_01254","SJAG_00526","SJAG_02426","SJAG_04394","SJAG_04126","SJAG_03327","SJAG_00364","SJAG_02723","SJAG_02921","SJAG_03048","SJAG_02481","SJAG_00600","SJAG_02266","SJAG_00266","SJAG_04287","SJAG_01082","SJAG_04312","SJAG_02773","SJAG_00472","SJAG_02730","SJAG_04682","SJAG_02771","SJAG_00975","SJAG_01754","SJAG_01680","SJAG_01699","SJAG_00990","SJAG_01919","SJAG_00145","SJAG_03438","SJAG_04280","SJAG_01515","SJAG_04140","SJAG_03854","SJAG_01084","SJAG_04259","SJAG_02444","SJAG_04026","SJAG_01837","SJAG_01401","SJAG_03081","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114882,106679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[106979,116446,91757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[114644,89383,116447,106980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[75746,117058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[111575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"},{"annotations":[92417,102704,93546,96725,105268,89134,116953,101962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031138"},{"annotations":[95493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140538"},{"annotations":[78822,70986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110031"},{"annotations":[88525,107015,107211,115922,109382,106861,94700,94558,106168,114855,116458,102189,91736,100880,104847,106266,93257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010515"},{"annotations":[116770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051447"},{"annotations":[99023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[93652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[108336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[114170],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[101678],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of reproductive process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"negatively_regulates","term_name":"reproductive process","termid":"GO:0022414"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00266":null,"SJAG_00364":null,"SJAG_00472":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00975":null,"SJAG_00990":null,"SJAG_01082":null,"SJAG_01084":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01330":null,"SJAG_01401":null,"SJAG_01515":null,"SJAG_01680":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_01837":null,"SJAG_01919":null,"SJAG_02266":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02771":null,"SJAG_02773":null,"SJAG_02921":null,"SJAG_03048":null,"SJAG_03081":null,"SJAG_03327":null,"SJAG_03438":null,"SJAG_03854":null,"SJAG_04026":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04312":null,"SJAG_04394":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of reproductive process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:2000242","terms_by_termid":{"GO:0010515":null,"GO:0031138":null,"GO:0033315":null,"GO:0033316":null,"GO:0045128":null,"GO:0051447":null,"GO:0051598":null,"GO:0075297":null,"GO:0090029":null,"GO:0110031":null,"GO:0140538":null,"GO:1902103":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0064501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit D","termid":"PBO:0064501"}


id: PBO:0044072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSTB pseudogene 1","termid":"PBO:0044072"}


id: PBO:0057663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1255b-1","termid":"PBO:0057663"}


id: PBO:0047035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 98 member C","termid":"PBO:0047035"}


id: PBO:0000496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain","termid":"PBO:0000496"}


id: MONDO:0958344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare closed dysraphism with stalk characterized by a dorsal midline dermal sinus tract lined by keratinizing stratified squamous epithelium extending to the the intrathecal space. Other components such as hair follicles and shafts, mesenchymal derivatives (blood vessels and fibrous tissue) and occasionally nerve fibers can be observed. Inflamed granulation tissue containing mixed neutrophils, plasma cells, lymphocytes, and histiocytes is consistently found in the tract. It can also be associated with an intradural dermoid cyst. This malformation is at risk to cause intrathecal infections (meningitis, empyema) that justify a prophylactic surgery.","definition_xrefs":["Orphanet:645188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysraphism with stalk","termid":"MONDO:0958259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"spinal dermal sinus","termid":"MONDO:0958344","xrefs":{"Monarch":{"xref_id":"0958344"}}}


id: GO:2000323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nuclear receptor-mediated glucocorticoid signaling pathway.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033144"},{"relation_name":"is_a","term_name":"regulation of nuclear receptor-mediated glucocorticoid signaling pathway","termid":"GO:2000322"},{"relation_name":"negatively_regulates","term_name":"nuclear receptor-mediated glucocorticoid signaling pathway","termid":"GO:0042921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nuclear receptor-mediated glucocorticoid signaling pathway","synonyms":[{"name":"negative regulation of glucocorticoid receptor signaling pathway","type":"exact"},{"name":"negative regulation of glucocorticoid receptor signalling pathway","type":"exact"}],"termid":"GO:2000323"}


id: MONDO:1010075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia B that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia B, non-human animal","secondary_identifiers":["OMIA:000438"],"termid":"MONDO:1010075","xrefs":{"Monarch":{"xref_id":"1010075"}}}


id: GO:0036511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of the first alpha-1,2-linked mannose from the A-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.","definition_xrefs":["PMID:12829701","GOC:bf","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete trimming of first mannose on A branch (obsolete GO:0036511)","synonyms":[{"name":"conversion of (Man)9(GlcNAc)2 to (Man)8A(GlcNAc)2","type":"related"},{"name":"conversion of M9 to M8A","type":"related"},{"name":"glycoprotein mannose trimming on A branch","type":"broad"}],"termid":"GO:0036511"}


id: PBO:0116972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRD1 antisense RNA 2","termid":"PBO:0116972"}


id: PBO:0017070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, double strand break localizing Dbl1","termid":"PBO:0017070"}


id: GO:0044813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycolytic fermentation beginning with the anaerobic conversion of glucose to pyruvate by the glycolytic pathway, continuing with pyruvate:ferredoxin oxidoreductase (PFOR) activity. This pathway is found in strict anaerobes such as Clostridia species.","definition_xrefs":["GOC:mengo_curators","PMID:20692761","PMID:20395274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"glycolytic fermentation via PFOR pathway","secondary_identifiers":["MetaCyc:CENTFERM-PWY"],"termid":"GO:0044813"}


id: PBO:0034180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_homology_relationship_with","termid":"PBO:0034180"}


id: GO:0010735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of the specifically regulated synthesis of RNA from DNA encoding a specific set of genes as a result of a transcription factor interacting with a serum response element (SRE). A serum response element is a short sequence with dyad symmetry found in the promoters of some of the cellular immediate-early genes, regulated by serum.","definition_xrefs":["GOC:dph","GOC:tb","GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription via serum response element binding (obsolete GO:0010735)","termid":"GO:0010735"}


id: PBO:0005242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pho85/PhoA-like cyclin-dependent kinase Pef1","termid":"PBO:0005242"}


id: GO:0000305
data:
  {"annotated_genes":["SJAG_04632","SJAG_04403","SJAG_00668","SJAG_01734","SJAG_04788","SJAG_05181","SJAG_03653","SJAG_03303","SJAG_04399"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93466,89306,74671,89727,99606,69273,65335,61054,58105],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen radical stimulus. An oxygen radical is any oxygen species that carries a free electron; examples include hydroxyl radicals and the superoxide anion.","definition_xrefs":["GOC:krc","ISBN:0124325653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to reactive oxygen species","termid":"GO:0000302"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_01734":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxygen radical","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0000305","terms_by_termid":{"GO:0019430":null}}


id: GO:0048103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a somatic stem cell, a stem cell that can give rise to cell types of the body other than those of the germ-line.","definition_xrefs":["GOC:jid","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell division","termid":"GO:0017145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic stem cell division","synonyms":[{"name":"somatic stem cell renewal","type":"exact"}],"termid":"GO:0048103"}


id: MONDO:0020107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemolytic anemia due to an erythrocyte nucleotide metabolism disorder (obsolete MONDO:0020107)","secondary_identifiers":["Orphanet:98374"],"synonyms":[{"name":"hemolytic anemia due to an erythroenzymopathy","type":"exact"}],"termid":"MONDO:0020107","xrefs":{"Monarch":{"xref_id":"0020107"}}}


id: PBO:0085998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to bacterial nitroreductases; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; protein becomes insoluble upon intracellular iron depletion; protein abundance increases in response to DNA replication stress","termid":"PBO:0085998"}


id: PBO:0003071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fizzy-related protein Mfr1","termid":"PBO:0003071"}


id: PBO:0116326
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of High Pi","termid":"PBO:0116326"}


id: GO:0120159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a uridine in rRNA = a pseudouridine in rRNA. Conversion of uridine in an rRNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.","definition_xrefs":["PMID:28432181","RHEA:54568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudouridine synthase activity","termid":"GO:0009982"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140098","GO:0016853"],"is_obsolete":false,"name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}


id: PBO:0040632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BarH like homeobox 1","termid":"PBO:0040632"}


id: SO:0001508
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of alteration of one or more chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alteration_attribute","synonyms":[{"name":"alteration attribute","type":"exact"}],"termid":"SO:0001508"}


id: PATO:0000177
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000177 physiological function (obsolete PATO:0000177)","termid":"PATO:0000177"}


id: PBO:0040315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 10","termid":"PBO:0040315"}


id: PBO:0061668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 50 pseudogene 1","termid":"PBO:0061668"}


id: PBO:0049815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 7","termid":"PBO:0049815"}


id: GO:2000965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellooligosaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of cellooligosaccharide metabolic process","termid":"GO:2000962"},{"relation_name":"is_a","term_name":"regulation of cellooligosaccharide catabolic process","termid":"GO:2000963"},{"relation_name":"positively_regulates","term_name":"cellooligosaccharide catabolic process","termid":"GO:2000903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellooligosaccharide catabolic process","synonyms":[{"name":"positive regulation of cellooligosaccharide catabolism","type":"exact"}],"termid":"GO:2000965"}


id: GO:0018748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: iprodione + OH- = 3,5-dichlorophenylcarboximide + N-isopropylcarbamate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete iprodione amidohydrolase activity (obsolete GO:0018748)","termid":"GO:0018748"}


id: MONDO:0021221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the vestibulocochlear nerve.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibulocochlear nerve disorder","termid":"MONDO:0001563"},{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibulocochlear nerve neoplasm","secondary_identifiers":["MEDGEN:91099","NCIT:C5120","UMLS:C0346330","SCTID:387891008"],"synonyms":[{"name":"Vestibuloacoustic nerve neoplasms","type":"exact"},{"name":"acoustic nerve neoplasm","type":"exact"},{"name":"acoustic nerve tumor","type":"exact"},{"name":"acoustic nerve tumour","type":"exact"},{"name":"cranial nerve eight neoplasms","type":"exact"},{"name":"eighth cranial nerve neoplasm","type":"exact"},{"name":"eighth cranial nerve neoplasms","type":"exact"},{"name":"eighth cranial nerve tumor","type":"exact"},{"name":"eighth cranial nerve tumour","type":"exact"},{"name":"neoplasm of acoustic nerve","type":"exact"},{"name":"neoplasm of eighth cranial nerve","type":"exact"},{"name":"neoplasm of the acoustic nerve","type":"exact"},{"name":"neoplasm of the eighth cranial nerve","type":"exact"},{"name":"neoplasm of the vestibulocochlear nerve","type":"exact"},{"name":"neoplasm of vestibulocochlear nerve","type":"exact"},{"name":"tumor of acoustic nerve","type":"exact"},{"name":"tumor of eighth cranial nerve","type":"exact"},{"name":"tumor of the acoustic nerve","type":"exact"},{"name":"tumor of the eighth cranial nerve","type":"exact"},{"name":"tumor of the vestibulocochlear nerve","type":"exact"},{"name":"tumor of vestibulocochlear nerve","type":"exact"},{"name":"tumour of acoustic nerve","type":"exact"},{"name":"tumour of eighth cranial nerve","type":"exact"},{"name":"tumour of the acoustic nerve","type":"exact"},{"name":"tumour of the eighth cranial nerve","type":"exact"},{"name":"tumour of the vestibulocochlear nerve","type":"exact"},{"name":"tumour of vestibulocochlear nerve","type":"exact"},{"name":"vestibulocochlear nerve neoplasm (disease)","type":"exact"},{"name":"vestibulocochlear nerve neoplasms","type":"exact"},{"name":"vestibulocochlear nerve tumor","type":"exact"},{"name":"vestibulocochlear nerve tumour","type":"exact"}],"termid":"MONDO:0021221","xrefs":{"Monarch":{"xref_id":"0021221"}}}


id: PBO:0030391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mononucleate_vegetative_cell_with_mislocalized_septum","termid":"PBO:0030391"}


id: PBO:0089778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific serine/threonine protein kinase (NDR family) Mug27/Slk1","termid":"PBO:0089778"}


id: MONDO:0008297
data:
  {"annotated_genes":["SJAG_02876"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86069],"is_not":false,"summary":null,"term":"MONDO:0008297"},{"annotations":[86714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957577"}]},"cv_name":"mondo","definition":"Variegate porphyria is a form of acute hepatic porphyria characterized by the occurrence of neuro-visceral attacks with or without the presence of cutaneous lesions.","definition_xrefs":["Orphanet:79473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic porphyria","termid":"MONDO:0002520"},{"relation_name":"is_a","term_name":"inherited porphyria","termid":"MONDO:0019142"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02876":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0005093","MONDO:0005066","MONDO:0019142"],"is_obsolete":false,"name":"variegate porphyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0162532","icd11.foundation:1227474618","MESH:D046350","NANDO:1200814","MEDGEN:58118","GARD:7848","NCIT:C85219","OMIM:176200","NANDO:2201265","SCTID:58275005","DOID:4346"],"synonyms":[{"name":"PPOX deficiency","type":"related"},{"name":"Protocoproporphyria","type":"exact"},{"name":"VP","type":"related"},{"name":"porphyria variegata","type":"related"},{"name":"porphyria variegata, susceptibility to","type":"related"},{"name":"porphyria variegate","type":"related"},{"name":"porphyria, South African type","type":"related"},{"name":"protoporphyrinogen oxidase deficiency","type":"exact"},{"name":"variegate porphyria","type":"exact"},{"name":"variegate porphyria, homozygous variant","type":"related"}],"termid":"MONDO:0008297","terms_by_termid":{"MONDO:0008297":null,"MONDO:0957577":null},"xrefs":{"Monarch":{"xref_id":"0008297"}}}


id: PBO:0079370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 4","termid":"PBO:0079370"}


id: PR:P10505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division cycle protein 27 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01865","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.01c","secondary_identifiers":["UniProtKB:P10505"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CDC27","type":"exact"},{"name":"nuclear alteration protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nuclear scaffold-like protein p76 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P10505"}


id: PBO:0053342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 216","termid":"PBO:0053342"}


id: GO:0098562
data:
  {"annotated_genes":["SJAG_01307","SJAG_01738","SJAG_03056","SJAG_02605","SJAG_01312","SJAG_04583","SJAG_00554","SJAG_02102","SJAG_04018","SJAG_00747","SJAG_03311","SJAG_04077","SJAG_01178","SJAG_02444","SJAG_02587","SJAG_01260","SJAG_04509","SJAG_04732","SJAG_03596","SJAG_02163","SJAG_00754","SJAG_03464","SJAG_04821","SJAG_01940","SJAG_01774","SJAG_03081","SJAG_05268","SJAG_03328","SJAG_01242","SJAG_02196","SJAG_04026","SJAG_03345","SJAG_04666","SJAG_00605","SJAG_02989","SJAG_00948","SJAG_00368","SJAG_05207","SJAG_02233","SJAG_01134"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94226,110217,95415,117125,76407,98667,106193,114510,99007,98107,108379,111377,102638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098554"},{"annotations":[90900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010009"},{"annotations":[100864,101681,106156,89577,102844,105166,104811,99588,106287,106949,116157,118069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032473"},{"annotations":[88200,90052,99308,92739,78581,80090,76636,111235,71146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009898"},{"annotations":[106951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[110911],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[75658,80705,106859,74639],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"The side of a membrane that faces the cytoplasm.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_00554":null,"SJAG_00605":null,"SJAG_00747":null,"SJAG_00754":null,"SJAG_00948":null,"SJAG_01134":null,"SJAG_01178":null,"SJAG_01242":null,"SJAG_01260":null,"SJAG_01307":null,"SJAG_01312":null,"SJAG_01738":null,"SJAG_01774":null,"SJAG_01940":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02196":null,"SJAG_02233":null,"SJAG_02444":null,"SJAG_02587":null,"SJAG_02605":null,"SJAG_02989":null,"SJAG_03056":null,"SJAG_03081":null,"SJAG_03311":null,"SJAG_03328":null,"SJAG_03345":null,"SJAG_03464":null,"SJAG_03596":null,"SJAG_04018":null,"SJAG_04026":null,"SJAG_04077":null,"SJAG_04509":null,"SJAG_04583":null,"SJAG_04666":null,"SJAG_04732":null,"SJAG_04821":null,"SJAG_05207":null,"SJAG_05268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098562","terms_by_termid":{"GO:0005834":null,"GO:0009898":null,"GO:0010009":null,"GO:0031234":null,"GO:0032473":null,"GO:0098554":null,"GO:0106186":null}}


id: GO:0033104
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of proteins that permits the transfer of proteins into the extracellular milieu or directly into host cells via the type VI secretion system. Proteins secreted by this complex do not require an N-terminal signal sequence.","definition_xrefs":["PMID:16432199","PMID:16763151","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"type VI protein secretion system complex","synonyms":[{"name":"T6SS complex","type":"exact"}],"termid":"GO:0033104"}


id: MONDO:0008320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protrusio acetabuli","secondary_identifiers":["HP:0003179","SCTID:59606006","UMLS:C0409495","MEDGEN:98369","OMIM:177050"],"synonyms":[{"name":"PROTRUSIO acetabuli","type":"related"},{"name":"Protrusio acetabuli","type":"exact"},{"name":"Protrusio acetabuli (disease)","type":"exact"}],"termid":"MONDO:0008320","xrefs":{"Monarch":{"xref_id":"0008320"}}}


id: MONDO:0006735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retrograde flow of duodenal contents (bile acids; pancreatic juice) into the stomach.","definition_xrefs":["MESH:D004383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duodenal disorder","termid":"MONDO:0002866"},{"relation_name":"is_a","term_name":"gastroesophageal reflux disease","termid":"MONDO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"duodenogastric reflux","secondary_identifiers":["UMLS:C0013299","MedDRA:10060865","EFO:1000909","DOID:4071","MEDGEN:4420"],"synonyms":[{"name":"duodenogastric reflux (finding)","type":"exact"}],"termid":"MONDO:0006735","xrefs":{"Monarch":{"xref_id":"0006735"}}}


id: GO:0016973
data:
  {"annotated_genes":["SJAG_02534","SJAG_04480","SJAG_00178","SJAG_01715","SJAG_04379","SJAG_02704","SJAG_04148","SJAG_03002","SJAG_01185","SJAG_04115","SJAG_04347","SJAG_01529","SJAG_04656","SJAG_00298","SJAG_04017","SJAG_04202","SJAG_00641","SJAG_03986","SJAG_04721","SJAG_05328","SJAG_03847","SJAG_01083","SJAG_00093","SJAG_01449","SJAG_00992","SJAG_04310","SJAG_01584","SJAG_04536","SJAG_01374","SJAG_02209"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70208,71795,73383,73545,73997,74311,74581,74847,75072,76056,77655,80749,92523,96867,97278,101736,102204,102991,104284,107996,110229,110799,111498,112126,114844,116189,116442,116701,118421,119328],"is_not":false,"summary":null,"term":"GO:0016973"}]},"cv_name":"biological_process","definition":"The directed movement of poly(A)+ mRNA out of the nucleus into the cytoplasm.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA export from nucleus","termid":"GO:0006406"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02534":null,"SJAG_02704":null,"SJAG_03002":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04379":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0010467","GO:0006913"],"is_obsolete":false,"name":"poly(A)+ mRNA export from nucleus","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"poly(A) mRNA export from nucleus","type":"exact"},{"name":"poly(A)+ mRNA export from cell nucleus","type":"exact"},{"name":"poly(A)+ mRNA export out of nucleus","type":"exact"},{"name":"poly(A)+ mRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"poly(A)+ mRNA-nucleus export","type":"exact"},{"name":"polyadenylated mRNA export from nucleus","type":"related"}],"termid":"GO:0016973","terms_by_termid":{"GO:0016973":null}}


id: PBO:0040800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BHLHE22 antisense RNA 1","termid":"PBO:0040800"}


id: PBO:0049642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 45","termid":"PBO:0049642"}


id: PBO:0001131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Lysine","termid":"PBO:0001131"}


id: GO:0018379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The linkage of cytochromes and other heme proteins to heme via heme-bis-L-cysteine.","definition_xrefs":["RESID:AA0134"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c-heme linkage via heme-bis-L-cysteine (obsolete GO:0018379)","synonyms":[{"name":"cytochrome c-haem linkage via haem-bis-L-cysteine","type":"exact"}],"termid":"GO:0018379"}


id: PBO:0058821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7978","termid":"PBO:0058821"}


id: PBO:0111755
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein","termid":"PBO:0111755"}


id: PBO:0052540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 13","termid":"PBO:0052540"}


id: PBO:0038855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS like 2","termid":"PBO:0038855"}


id: PBO:0031695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_import","termid":"PBO:0031695"}


id: GO:0007614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The memory process that deals with the storage, retrieval and modification of information received a short time (up to about 30 minutes) ago. This type of memory is typically dependent on direct, transient effects of second messenger activation.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"memory","termid":"GO:0007613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"short-term memory","secondary_identifiers":["Wikipedia:Short-term_memory"],"termid":"GO:0007614"}


id: GO:1904322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a forskolin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:15937517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to forskolin","termid":"GO:1904321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to forskolin","termid":"GO:1904322"}


id: PBO:0073426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3a subunit 2","termid":"PBO:0073426"}


id: GO:0009086
data:
  {"annotated_genes":["SJAG_04042","SJAG_02293","SJAG_03712","SJAG_03152","SJAG_00881","SJAG_00395","SJAG_00309","SJAG_04425","SJAG_01404","SJAG_02290","SJAG_03881","SJAG_02972","SJAG_03671","SJAG_04459","SJAG_01466","SJAG_02689","SJAG_03614"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71441,72250,74901,79378,112349],"is_not":false,"summary":null,"term":"GO:0009086"},{"annotations":[68792,65632,111468,106354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[101009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[79562,58782,78207,78657,80442,77258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[98854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid biosynthetic process","termid":"GO:0000097"},{"relation_name":"is_a","term_name":"methionine metabolic process","termid":"GO:0006555"},{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_00395":null,"SJAG_00881":null,"SJAG_01404":null,"SJAG_01466":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_02972":null,"SJAG_03152":null,"SJAG_03614":null,"SJAG_03671":null,"SJAG_03712":null,"SJAG_03881":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"methionine biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"methionine anabolism","type":"exact"},{"name":"methionine biosynthesis","type":"exact"},{"name":"methionine formation","type":"exact"},{"name":"methionine synthesis","type":"exact"}],"termid":"GO:0009086","terms_by_termid":{"GO:0009086":null,"GO:0019280":null,"GO:0019284":null,"GO:0019509":null,"GO:0071266":null}}


id: GO:0098664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a G protein-coupled serotonin receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled serotonin receptor signaling pathway","synonyms":[{"name":"G-protein coupled serotonin receptor signaling pathway","type":"exact"}],"termid":"GO:0098664"}


id: MONDO:0015376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"first branchial cleft anomaly","secondary_identifiers":["SCTID:73371000119103","MEDGEN:848144","Orphanet:141013","UMLS:C3874320","GARD:19934","icd11.foundation:1956658224"],"synonyms":[{"name":"first branchial cleft cyst","type":"exact"},{"name":"first branchial cleft fistula","type":"exact"}],"termid":"MONDO:0015376","xrefs":{"Monarch":{"xref_id":"0015376"}}}


id: MONDO:0002862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma that involves the bile duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver sarcoma","termid":"MONDO:0002397"},{"relation_name":"is_a","term_name":"bile duct cancer","termid":"MONDO:0003059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"bile duct sarcoma","secondary_identifiers":["NCIT:C5029","DOID:4064"],"synonyms":[{"name":"bile duct sarcoma","type":"exact"},{"name":"sarcoma of bile duct","type":"exact"},{"name":"sarcoma of the bile duct","type":"exact"}],"termid":"MONDO:0002862","xrefs":{"Monarch":{"xref_id":"0002862"}}}


id: PBO:0067757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 56","termid":"PBO:0067757"}


id: FYPO:0004792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is smaller than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PMID:22959349","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased telomere-nuclear envelope distance during mitotic G2 phase","synonyms":[{"name":"decreased distance between telomeres and nuclear envelope during mitotic G2 phase","type":"exact"},{"name":"decreased telomere-nuclear envelope distance during G2 phase during mitotic cell cycle","type":"related"},{"name":"decreased telomere-nuclear envelope distance during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"reduced telomere-nuclear envelope distance during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0004792"}


id: PBO:0082804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U1 snRNP required for mRNA splicing via spliceosome; yeast specific, no metazoan counterpart; interacts with mRNA in commitment complex","termid":"PBO:0082804"}


id: MONDO:0019470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, highly aggressive, Epstein-Barr virus-associated leukemia, also known as aggressive NK-cell leukemia/lymphoma; it may represent the leukemic counterpart of nasal type extranodal NK/T-cell lymphomas. It affects primarily teenagers and young adults. It is characterized by the systemic proliferation of NK cells in the peripheral blood, bone marrow, liver, and spleen.","definition_xrefs":["NCIT:C8647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature T-cell and NK-cell non-Hodgkin lymphoma","termid":"MONDO:0000430"},{"relation_name":"is_a","term_name":"chronic leukemia","termid":"MONDO:0001014"},{"relation_name":"is_a","term_name":"precursor T-lymphoblastic lymphoma/leukemia","termid":"MONDO:0003537"},{"relation_name":"is_a","term_name":"T-cell acute lymphoblastic leukemia","termid":"MONDO:0004963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"aggressive NK-cell leukemia","secondary_identifiers":["UMLS:C1292777","MEDGEN:266235","DOID:1035","icd11.foundation:153957345","ICDO:9948/3","GARD:10493","MedDRA:10028811","NANDO:2200012","ONCOTREE:ANKL","Orphanet:86873","SCTID:721310007"],"synonyms":[{"name":"ANKCL","type":"exact"},{"name":"ANKL","type":"related"},{"name":"NK cell leukaemia","type":"exact"},{"name":"NK cell leukemia","type":"exact"},{"name":"NK-cell LGL leukaemia","type":"exact"},{"name":"NK-cell LGL leukemia","type":"exact"},{"name":"NK-cell large granular lymphocyte leukaemia","type":"exact"},{"name":"NK-cell large granular lymphocyte leukemia","type":"exact"},{"name":"NK-cell leukaemia","type":"exact"},{"name":"NK-cell leukemia","type":"exact"},{"name":"aggressive NK cell leukaemia","type":"related"},{"name":"aggressive NK cell leukemia","type":"related"},{"name":"aggressive NK-cell leukaemia (morphologic abnormality)","type":"exact"},{"name":"aggressive NK-cell leukemia","type":"exact"},{"name":"aggressive NK-cell leukemia (morphologic abnormality)","type":"exact"},{"name":"aggressive NK-cell leukemia/lymphoma","type":"exact"},{"name":"aggressive NK-cell lymphoma","type":"exact"},{"name":"aggressive natural killer cell leukaemia","type":"related"},{"name":"aggressive natural killer cell leukemia","type":"related"},{"name":"large granular lymphocyte leukemia, NK-cell type","type":"exact"},{"name":"leukaemia (disease) of natural killer cell","type":"exact"},{"name":"leukemia (disease) of natural killer cell","type":"exact"},{"name":"natural Killer cell leukaemia","type":"exact"},{"name":"natural Killer cell leukemia","type":"exact"},{"name":"natural killer cell leukaemia","type":"exact"},{"name":"natural killer cell leukaemia (disease)","type":"exact"},{"name":"natural killer cell leukemia","type":"exact"},{"name":"natural killer cell leukemia (disease)","type":"exact"}],"termid":"MONDO:0019470","xrefs":{"Monarch":{"xref_id":"0019470"}}}


id: MONDO:0010796
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Parkinson disease","termid":"MONDO:0005180"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease, mitochondrial","secondary_identifiers":["MEDGEN:333199","UMLS:C1838867","MESH:C564015","OMIM:556500"],"synonyms":[{"name":"Parkinson disease, mitochondrial","type":"exact"}],"termid":"MONDO:0010796","xrefs":{"Monarch":{"xref_id":"0010796"}}}


id: PBO:0049102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR158 antisense RNA 1","termid":"PBO:0049102"}


id: PBO:0012306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper binding protein of the mitochondrial inner membrane Cmc2 (predicted)","termid":"PBO:0012306"}


id: MONDO:0017097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated focal cortical dysplasia type I","termid":"MONDO:0017095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated focal cortical dysplasia type Ib","secondary_identifiers":["GARD:20985","UMLS:C5679765","MEDGEN:1842666","NANDO:1200566","Orphanet:268980"],"synonyms":[{"name":"FCD type IB","type":"exact"}],"termid":"MONDO:0017097","xrefs":{"Monarch":{"xref_id":"0017097"}}}


id: GO:1905748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which a hard palate is generated and organized.","definition_xrefs":["GO_REF:0000083","PMID:23419067","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hard palate morphogenesis","synonyms":[{"name":"palatum durum morphogenesis","type":"exact"}],"termid":"GO:1905748"}


id: FYPO:0003352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which DNA double-strand break formation occurs to a lower extent than normal during gene conversion at the mating-type locus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased mating type switching","termid":"FYPO:0000470"},{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"decreased DNA double-strand break formation at mating-type locus","synonyms":[{"name":"decreased DNA double-strand break formation at mating-type locus during gene conversion","type":"exact"},{"name":"decreased DNA double-strand break formation at mating-type locus during mitotic cell cycle","type":"related"},{"name":"decreased DNA double-strand break formation at mating-type locus during vegetative growth","type":"exact"},{"name":"decreased DNA double-strand break formation during gene conversion at mating-type locus","type":"exact"},{"name":"decreased DSB formation at mat1","type":"exact"},{"name":"decreased DSB formation at mating-type locus","type":"exact"},{"name":"decreased DSB formation proximal to mat1","type":"exact"},{"name":"decreased gene conversion at mating-type locus, DNA double-strand break formation","type":"exact"},{"name":"reduced DNA double-strand break formation at mating-type locus","type":"exact"}],"termid":"FYPO:0003352"}


id: PBO:0029348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_nuclear_tRNA_processing_intermediates_with_3'_extensions","termid":"PBO:0029348"}


id: MONDO:0003244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant mesenchymal neoplasm originating in the central nervous system or the meninges and showing fibrous, fibrohistiocytic, adipose, myoid, endothelial, chondroid or osseous, but not meningothelial differentiation. Depending on the histological features and clinical behavior of these neoplasms, their grade ranges from benign (WHO grade I) to highly malignant (WHO grade IV). (Adapted from WHO)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"central nervous system cancer","termid":"MONDO:0002714"},{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system mesenchymal non-meningothelial tumor","secondary_identifiers":["DOID:502","MEDGEN:234104","NCIT:C5449","UMLS:C1332893"],"synonyms":[{"name":"CNS soft tissue neoplasm","type":"exact"},{"name":"CNS soft tissue tumor","type":"exact"},{"name":"CNS soft tissue tumour","type":"exact"},{"name":"central nervous system mesenchymal, non-meningothelial neoplasm","type":"exact"},{"name":"central nervous system mesenchymal, non-meningothelial tumor","type":"exact"},{"name":"central nervous system mesenchymal, non-meningothelial tumour","type":"exact"},{"name":"central nervous system soft tissue neoplasm","type":"exact"},{"name":"central nervous system soft tissue tumor","type":"exact"},{"name":"central nervous system soft tissue tumour","type":"exact"},{"name":"mesenchymal non-meningothelial tumor of the central nervous system","type":"exact"},{"name":"mesenchymal non-meningothelial tumour of the central nervous system","type":"exact"},{"name":"mesenchymal, non-meningothelial tumor of CNS","type":"exact"},{"name":"mesenchymal, non-meningothelial tumor of central nervous system","type":"exact"},{"name":"mesenchymal, non-meningothelial tumor of the CNS","type":"exact"},{"name":"mesenchymal, non-meningothelial tumour of CNS","type":"exact"},{"name":"mesenchymal, non-meningothelial tumour of central nervous system","type":"exact"},{"name":"mesenchymal, non-meningothelial tumour of the CNS","type":"exact"},{"name":"non-meningothelial mesenchymal tumor","type":"exact"},{"name":"non-meningothelial mesenchymal tumour","type":"exact"},{"name":"soft tissue neoplasm of CNS","type":"exact"},{"name":"soft tissue neoplasm of central nervous system","type":"exact"},{"name":"soft tissue neoplasm of the CNS","type":"exact"},{"name":"soft tissue neoplasm of the central nervous system","type":"exact"},{"name":"soft tissue tumor of CNS","type":"exact"},{"name":"soft tissue tumor of central nervous system","type":"exact"},{"name":"soft tissue tumor of the CNS","type":"exact"},{"name":"soft tissue tumor of the central nervous system","type":"exact"},{"name":"soft tissue tumour of CNS","type":"exact"},{"name":"soft tissue tumour of central nervous system","type":"exact"},{"name":"soft tissue tumour of the CNS","type":"exact"},{"name":"soft tissue tumour of the central nervous system","type":"exact"}],"termid":"MONDO:0003244","xrefs":{"Monarch":{"xref_id":"0003244"}}}


id: MONDO:0007720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hernia, double inguinal","secondary_identifiers":["MEDGEN:163567","OMIM:142350","UMLS:C0860251","MESH:C563164"],"synonyms":[{"name":"hernia, double inguinal","type":"exact"}],"termid":"MONDO:0007720","xrefs":{"Monarch":{"xref_id":"0007720"}}}


id: GO:0052815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain fatty acyl-CoA + H2O = a medium-chain fatty acid + CoA + H+. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["RHEA:68184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"medium-chain fatty acyl-CoA hydrolase activity","secondary_identifiers":["MetaCyc:3.1.2.19-RXN"],"synonyms":[{"name":"medium-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"medium-chain acyl-thioester hydrolase activity","type":"related"},{"name":"medium-chain hydrolase activity","type":"related"},{"name":"medium-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0052815"}


id: GO:0001686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete axonemal dynein light chain (obsolete GO:0001686)","synonyms":[{"name":"axonemal dynein light chain","type":"exact"}],"termid":"GO:0001686"}


id: GO:0007436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the larva, by which the anatomical structures of the salivary gland are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland morphogenesis","termid":"GO:0007435"},{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"instar larval development","termid":"GO:0002168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval salivary gland morphogenesis","termid":"GO:0007436"}


id: PBO:0066520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repulsive guidance molecule BMP co-receptor a","termid":"PBO:0066520"}


id: PBO:0040801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix family member e23","termid":"PBO:0040801"}


id: GO:0008579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: JUN kinase serine/threonine/tyrosine phosphate + H2O = JUN kinase serine/threonine/tyrosine + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine/serine/threonine phosphatase activity","termid":"GO:0008138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016787","GO:0004721","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"JUN kinase phosphatase activity","termid":"GO:0008579"}


id: GO:0060014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a granulosa cell, a supporting cell for the developing female gamete in the ovary of mammals.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell differentiation","termid":"GO:0060014"}


id: PBO:0079378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha pseudogene 13","termid":"PBO:0079378"}


id: MONDO:0020816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"miliaria","termid":"MONDO:0006580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"miliaria papulosa","secondary_identifiers":["UMLS:C0406494","SCTID:201192006","MEDGEN:590456"],"termid":"MONDO:0020816","xrefs":{"Monarch":{"xref_id":"0020816"}}}


id: MONDO:0015809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of mycosis fungoides, characterized by an exclusively intraepidermal atypical (cerebriform) lymphocytic infiltrate. Patients present with a localized psoriasiform or hyperkeratotic patch or plaque, usually in the extremities. Extracutaneous dissemination of the disease has never been reported.","definition_xrefs":["NCIT:C35794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycosis fungoides variant","termid":"MONDO:0045071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"localized pagetoid reticulosis","secondary_identifiers":["SCTID:404120006","ICD10CM:C84.0","Orphanet:178517","ICD9:202.70","MEDGEN:699349","UMLS:C1276140","MESH:D056267","GARD:20155"],"synonyms":[{"name":"localised reticulosis","type":"exact"},{"name":"localized reticulosis","type":"exact"},{"name":"pagetoid reticulosis","type":"exact"},{"name":"pagetoid reticulosis, Woringer-Kolopp type","type":"exact"}],"termid":"MONDO:0015809","xrefs":{"Monarch":{"xref_id":"0015809"}}}


id: MONDO:0020422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aortopulmonary coronary arterial course is a rare coronary artery congenital malformation characterized by anomalous origin of the coronary artery from the contralateral sinus of Valsalva with course between the aorta and the pulmonary artery. The anomaly is associated with increased risk of sudden cardiac death, especially during exercise.","definition_xrefs":["Orphanet:99086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortopulmonary coronary arterial course","secondary_identifiers":["MEDGEN:1668023","UMLS:C4757971"],"termid":"MONDO:0020422","xrefs":{"Monarch":{"xref_id":"0020422"}}}


id: PBO:0017941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain-binding protein Wbp4 (predicted)","termid":"PBO:0017941"}


id: GO:0043275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-acetyl-L-Asp-L-Glu + H2O = N-acetyl-L-Asp + L-Glu.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate carboxypeptidase II activity (obsolete GO:0043275)","synonyms":[{"name":"N-acetylated alpha-linked acidic dipeptidase activity","type":"related"},{"name":"N-acetylated-alpha-linked-amino dipeptidase activity","type":"related"},{"name":"N-acetylated-gamma-linked-acidic dipeptidase (NAALADase)","type":"related"},{"name":"N-acetylated-gamma-linked-acidic dipeptidase activity","type":"related"},{"name":"NAALA dipeptidase activity","type":"related"},{"name":"NAALADase activity","type":"related"},{"name":"PSM antigen","type":"related"},{"name":"PSMA","type":"related"},{"name":"acetylaspartylglutamate dipeptidase activity","type":"exact"},{"name":"folate hydrolase activity","type":"related"},{"name":"folylpolyglutamate hydrolase activity","type":"related"},{"name":"glutamate carboxypeptidase II activity","type":"exact"},{"name":"mGCP","type":"related"},{"name":"membrane glutamate carboxypeptidase","type":"narrow"},{"name":"microsomal gamma-glutamyl carboxypeptidase","type":"narrow"},{"name":"prostate-specific membrane antigen","type":"related"},{"name":"prostrate-specific membrane antigen","type":"related"},{"name":"pteroylpoly-gamma-glutamate carboxypeptidase activity","type":"related"},{"name":"pteroylpoly-gamma-glutamate hydrolase activity","type":"related"},{"name":"pteroylpolygammaglutamyl hydrolase activity","type":"related"},{"name":"pteroylpolyglutamate hydrolase activity","type":"related"},{"name":"pteroylpolyglutamic acid hydrolase activity","type":"related"},{"name":"rat NAAG peptidase","type":"narrow"}],"termid":"GO:0043275"}


id: GO:0032997
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of a subunit or subunits capable of binding the Fc portion of an immunoglobulin with additional signaling components. The complex functions as a receptor for immunoglobulin.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"Fc receptor complex","synonyms":[{"name":"Fc-receptor complex","type":"exact"},{"name":"FcR complex","type":"exact"},{"name":"immunoglobulin receptor complex","type":"broad"}],"termid":"GO:0032997"}


id: MONDO:0007978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant mesothelioma (obsolete MONDO:0007978)","termid":"MONDO:0007978","xrefs":{"Monarch":{"xref_id":"0007978"}}}


id: PBO:0048076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 27","termid":"PBO:0048076"}


id: MONDO:0023833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multifocal choroiditis (MFC) is an inflammatory disorder characterized by swelling of the eye (called uveitis) and multiple lesions in the choroid, a layer of blood vessels between the white of the eye and the retina. Symptoms include blurry vision, floaters, sensitivity to light, blind spots and mild eye discomfort. Though the cause is unknown, multifocal choroiditis is seen most frequently in women ages 20 to 60, and usually affects both eyes. MFC is generally treated with steroid medication that can be taken orally or injected into the eye. Multifocal choroiditis is a chronic condition, thus symptoms may return or worsen even after successful treatment.","definition_xrefs":["GARD:0009824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choroiditis","termid":"MONDO:0001280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"multifocal choroiditis","secondary_identifiers":["MESH:D000080364","SCTID:414783007","UMLS:C1533060","GARD:9824","icd11.foundation:1197219411","MEDGEN:288551","MESH:C537374"],"termid":"MONDO:0023833","xrefs":{"Monarch":{"xref_id":"0023833"}}}


id: PBO:0091995
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tfb6 annotation seems tenuous, SGD have not annotated","termid":"PBO:0091995"}


id: MONDO:0000262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fungus infection of the external ear, usually by aspergillus species","definition_xrefs":["MESH:D059249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otitis externa","termid":"MONDO:0004795"},{"relation_name":"is_a","term_name":"tinea infection","termid":"MONDO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"otomycosis","secondary_identifiers":["DOID:0050147","icd11.foundation:107388709","SCTID:53316003","UMLS:C0029895","ICD9:111.8","MEDGEN:452110"],"synonyms":[{"name":"Singapore ear","type":"related"},{"name":"external ear fungal infectious disease","type":"exact"},{"name":"otitis mycotic externa","type":"related"}],"termid":"MONDO:0000262","xrefs":{"Monarch":{"xref_id":"0000262"}}}


id: GO:0099106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulates the activity of a channel via direct interaction with it. A channel catalyzes energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"channel regulator activity","termid":"GO:0016247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674"],"is_obsolete":false,"name":"ion channel regulator activity","termid":"GO:0099106"}


id: PBO:0064997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM4 antisense RNA 1","termid":"PBO:0064997"}


id: MONDO:0017096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated focal cortical dysplasia type I","termid":"MONDO:0017095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated focal cortical dysplasia type Ia","secondary_identifiers":["MEDGEN:1843115","NANDO:1200565","GARD:20984","Orphanet:268973","UMLS:C5679767"],"synonyms":[{"name":"FCD type Ia","type":"exact"}],"termid":"MONDO:0017096","xrefs":{"Monarch":{"xref_id":"0017096"}}}


id: PBO:0068642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 23, pseudogene","termid":"PBO:0068642"}


id: MONDO:0007065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenosine deaminase, elevated, hemolytic anemia due to (obsolete MONDO:0007065)","termid":"MONDO:0007065","xrefs":{"Monarch":{"xref_id":"0007065"}}}


id: PBO:0046929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 47 member C","termid":"PBO:0046929"}


id: PBO:0039186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 17A","termid":"PBO:0039186"}


id: GO:0006700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of C21-steroid hormones, steroid compounds containing 21 carbons which function as hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C21-steroid hormone metabolic process","termid":"GO:0008207"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"steroid hormone biosynthetic process","termid":"GO:0120178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"C21-steroid hormone biosynthetic process","secondary_identifiers":["Reactome:R-HSA-196108"],"synonyms":[{"name":"C21-steroid hormone anabolism","type":"exact"},{"name":"C21-steroid hormone biosynthesis","type":"exact"},{"name":"C21-steroid hormone formation","type":"exact"},{"name":"C21-steroid hormone synthesis","type":"exact"}],"termid":"GO:0006700"}


id: GO:0050129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formyl-L-glutamate + H2O = L-glutamate + formate.","definition_xrefs":["EC:3.5.1.68","RHEA:12476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-formylglutamate deformylase activity","secondary_identifiers":["KEGG_REACTION:R00525","MetaCyc:N-FORMYLGLUTAMATE-DEFORMYLASE-RXN"],"synonyms":[{"name":"N-formyl-L-glutamate amidohydrolase activity","type":"related"},{"name":"N-formylglutamate hydrolase activity","type":"related"},{"name":"beta-citryl-L-glutamate amidase activity","type":"related"},{"name":"beta-citryl-L-glutamate amidohydrolase activity","type":"related"},{"name":"beta-citryl-L-glutamate hydrolase activity","type":"related"},{"name":"beta-citryl-L-glutamate-hydrolyzing enzyme","type":"related"},{"name":"beta-citrylglutamate amidase activity","type":"related"},{"name":"formylglutamate deformylase activity","type":"related"}],"termid":"GO:0050129"}


id: PBO:0113055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of ESCRT-II complex; contains GLUE (GRAM Like Ubiquitin binding in EAP45) domain which is involved in interactions with ESCRT-I and ubiquitin-dependent sorting of proteins into endosome; plays role in lager yeast flocculation under brewing conditions; plays role in formation of mutant huntingtin (Htt) aggregates in yeast","termid":"PBO:0113055"}


id: GO:0061767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that decreases the force with which blood travels through the lungs.","definition_xrefs":["GOC:BHF_miRNA","GOC:dph","GOC:BHF","PMID:22161164","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lung blood pressure","termid":"GO:0014916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lung blood pressure","synonyms":[{"name":"negative regulation of pulmonary blood pressure","type":"exact"}],"termid":"GO:0061767"}


id: PBO:0001370
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates sdh41","termid":"PBO:0001370"}


id: PBO:0091443
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Staurosporine-related Protein Kinase","termid":"PBO:0091443"}


id: MONDO:1011581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteogenesis imperfecta that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, dog","termid":"MONDO:1011194"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta, non-human animal","termid":"MONDO:1011454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteogenesis imperfecta, dog","secondary_identifiers":["OMIA:000754-9615"],"termid":"MONDO:1011581","xrefs":{"Monarch":{"xref_id":"1011581"}}}


id: PBO:0052277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 5D","termid":"PBO:0052277"}


id: PATO:0001277
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of orange hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orange","termid":"PATO:0000953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated orange","synonyms":[{"name":"bright orange","type":"related"}],"termid":"PATO:0001277"}


id: PBO:0084951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multi-spanning vacuolar membrane protease; glycosylated transmembrane protein bearing homology to the M28 family of metalloproteases; has a lumenal-facing protease domain; proposed role in vacuole physiology","termid":"PBO:0084951"}


id: GO:0050987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient sulfation of peptidyl-serine to form O-sulfo-L-serine.","definition_xrefs":["RESID:AA0361"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-sulfo-L-serine (obsolete GO:0050987)","termid":"GO:0050987"}


id: PBO:0040011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen receptor regulated long noncoding RNA 1","termid":"PBO:0040011"}


id: PBO:0068971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 215, pseudogene","termid":"PBO:0068971"}


id: MONDO:0000342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with O'nyong-nyong virus.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alphavirus infectious disease","termid":"MONDO:0005643"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O'nyong'nyong fever","secondary_identifiers":["UMLS:C0276286","ICD10CM:A92.1","MEDGEN:547234","DOID:0050516","SCTID:85579005"],"synonyms":[{"name":"O'nyong-nyong virus caused disease or disorder","type":"exact"},{"name":"O'nyong-nyong virus disease or disorder","type":"exact"},{"name":"O'nyong-nyong virus infectious disease","type":"exact"}],"termid":"MONDO:0000342","xrefs":{"Monarch":{"xref_id":"0000342"}}}


id: PBO:0063594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 7","termid":"PBO:0063594"}


id: PBO:0113553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex, dolichyl-diphosphooligosaccharide-protein glycotransferase catalytic subunit, Stt3","termid":"PBO:0113553"}


id: PATO:0002053
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being flattened along dorso-ventral axis.","definition_xrefs":["PATOC:MSP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorso-ventrally flattened","termid":"PATO:0002053"}


id: MONDO:0010566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked cone-rod dystrophy","termid":"MONDO:0021155"},{"relation_name":"is_a","term_name":"RPGR-related retinopathy","termid":"MONDO:0100437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked cone-rod dystrophy 1","secondary_identifiers":["UMLS:C1844776","MESH:C564438","OMIM:304020","MEDGEN:336777","DOID:0111008","GARD:10652"],"synonyms":[{"name":"COD1","type":"exact"},{"name":"CORDX1","type":"exact"},{"name":"X-linked cone dystrophy 1","type":"exact"},{"name":"X-linked cone-rod dystrophy type 1","type":"exact"},{"name":"cone dystrophy 1, X-linked","type":"related"},{"name":"cone dystrophy X-linked 1","type":"related"},{"name":"cone-rod dystrophy X-linked 1","type":"related"},{"name":"cone-rod dystrophy, X-linked, 1","type":"related"},{"name":"cone-rod dystrophy, X-linked, 1, X-linked recessive","type":"exact"},{"name":"cone-rod dystrophy, X-linked, type 1","type":"exact"}],"termid":"MONDO:0010566","xrefs":{"Monarch":{"xref_id":"0010566"}}}


id: PBO:0073606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shootin 1","termid":"PBO:0073606"}


id: PBO:0062342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily K member 1 pseudogene","termid":"PBO:0062342"}


id: MONDO:0004264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute endometritis","termid":"MONDO:0004265"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute gonococcal endometritis","secondary_identifiers":["SCTID:65295003","UMLS:C0153196","ICD9:098.16","DOID:7527","MEDGEN:509198"],"synonyms":[{"name":"acute gonorrhea of uterus","type":"exact"},{"name":"acute gonorrhoea of uterus","type":"exact"},{"name":"gonococcal endometritis","type":"exact"},{"name":"gonococcal endometritis (acute)","type":"exact"},{"name":"uterus - acute gonorrhea","type":"exact"},{"name":"uterus - acute gonorrhoea","type":"exact"}],"termid":"MONDO:0004264","xrefs":{"Monarch":{"xref_id":"0004264"}}}


id: PBO:0085318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 3-phosphate binding protein; formation of a distinct complex with TORC1, induced by glutamine in dose-dependent manner, results in TORC1 activation, suggesting dual roles as both a glutamine sensor and a direct TORC1 activator; involved in leucine- and glutamine-responsive TORC1 activation, independent of the Gtr/Ego pathway; related to human PLEKHF1, a lysosomal membrane permeabilization regulator; contains a PtdIns3P binding FYVE domain; similar to Fab1p and Vps27p","termid":"PBO:0085318"}


id: MONDO:0001185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by a retrospective gap in memory of important personal information, usually of a traumatic or stressful nature; the memory loss far exceeds ordinary forgetfulness and is not the result of substance use or the consequence of a medical condition.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dissociative disorder","termid":"MONDO:0001160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dissociative amnesia","secondary_identifiers":["ICD9:300.12","MEDGEN:66743","icd11.foundation:626975732","NCIT:C94328","DOID:11037","ICD10CM:F44.0","UMLS:C0236795","SCTID:84209002"],"synonyms":[{"name":"psychogenic amnesia","type":"exact"}],"termid":"MONDO:0001185","xrefs":{"Monarch":{"xref_id":"0001185"}}}


id: GO:0019489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylgallate, trihydroxymethylbenzoate, the anion of methylgallic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methylgallate metabolic process","synonyms":[{"name":"methylgallate metabolism","type":"exact"}],"termid":"GO:0019489"}


id: GO:1905861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an intranuclear rod.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie","PMID:28074884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"intranuclear rod assembly","synonyms":[{"name":"intranuclear actin rod assembly","type":"exact"},{"name":"intranuclear actin rod formation","type":"exact"},{"name":"intranuclear rod formation","type":"exact"}],"termid":"GO:1905861"}


id: PBO:0050376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3","termid":"PBO:0050376"}


id: PBO:0047713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 4","termid":"PBO:0047713"}


id: GO:0002256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the kinin cascade.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acute inflammatory response","termid":"GO:0002673"},{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"regulates","term_name":"kinin cascade","termid":"GO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"regulation of kinin cascade","termid":"GO:0002256"}


id: PBO:0083002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Damaged-DNA binding subunit of Nuclear Excision Repair Factor 2; recognizes and binds damaged DNA with Rad23p during nucleotide excision repair (NER); also involved with Rad23p in turnover of ubiquitylated proteins; Rad4p-Rad23p heterodimer binds to promoters of DNA damage response genes to repress their transcription in the absence of DNA damage; RAD4 and RAD51 pathways confer resistance to benzo[a]pyrene dihydrodiol","termid":"PBO:0083002"}


id: PBO:0049998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 4","termid":"PBO:0049998"}


id: GO:1901515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of poly-beta-1,6-N-acetyl-D-glucosamine from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","PMID:15090514","PMID:18359807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"poly-beta-1,6-N-acetyl-D-glucosamine transmembrane transporter activity","termid":"GO:1901515"}


id: FYPO:0003066
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which asci that contain one, two, or three spores form following conjugation and subsequent sporulation.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus with more or fewer than four spores","termid":"FYPO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000121","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus with fewer than four spores","synonyms":[{"name":"abnormal ascospore formation resulting in formation of asci with fewer than four spores","type":"exact"},{"name":"abnormal sporulation resulting in formation of asci with fewer than four spores","type":"exact"}],"termid":"FYPO:0003066"}


id: PBO:0067334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 426, pseudogene","termid":"PBO:0067334"}


id: MONDO:0022406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aksu von stockhausen syndrome (obsolete MONDO:0022406)","termid":"MONDO:0022406","xrefs":{"Monarch":{"xref_id":"0022406"}}}


id: GO:0099175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the physical form of a postsynapse.","definition_xrefs":["GOC:ai","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse organization","termid":"GO:0050807"},{"relation_name":"regulates","term_name":"postsynapse organization","termid":"GO:0099173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of postsynapse organization","synonyms":[{"name":"regulation of postsynapse organisation","type":"exact"},{"name":"regulation of postsynapse organization and biogenesis","type":"related"},{"name":"regulation of postsynapse structure","type":"exact"}],"termid":"GO:0099175"}


id: GO:0042959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of an alkanesulfonate from one side of a membrane to the other according to the reaction: ATP + H2O + alkanesulfonate(out) = ADP + phosphate + alkanesulfonate(in).","definition_xrefs":["PMID:10506196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"ATPase-coupled organic acid transmembrane transporter activity","termid":"GO:0033283"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type alkanesulfonate transporter transporter activity","synonyms":[{"name":"alkanesulfonate transmembrane transporter activity","type":"broad"},{"name":"alkanesulfonate transporter activity","type":"related"},{"name":"alkanesulphonate transporter activity","type":"exact"}],"termid":"GO:0042959"}


id: MONDO:0018558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with wooly hair (obsolete MONDO:0018558)","secondary_identifiers":["Orphanet:434809"],"termid":"MONDO:0018558","xrefs":{"Monarch":{"xref_id":"0018558"}}}


id: GO:1905678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of adaptive immune effector response.","definition_xrefs":["ISBN:9781405196833","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response","termid":"GO:0002820"},{"relation_name":"is_a","term_name":"regulation of adaptive immune effector response","termid":"GO:1905677"},{"relation_name":"negatively_regulates","term_name":"adaptive immune effector response","termid":"GO:0090718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adaptive immune effector response","synonyms":[{"name":"down regulation of adaptive immune effector response","type":"exact"},{"name":"down-regulation of adaptive immune effector response","type":"exact"},{"name":"downregulation of adaptive immune effector response","type":"exact"},{"name":"inhibition of adaptive immune effector response","type":"narrow"}],"termid":"GO:1905678"}


id: MOD:00737
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with an N-acetylneuraminic acid (sialic acid) group through a glycosidic bond.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N-acetylneuraminylated","synonyms":[{"name":"N-acetylneuraminic acid (Sialic acid, NeuAc, NANA, SA)","type":"exact"},{"name":"NeuNAc","type":"exact"}],"termid":"MOD:00737"}


id: PBO:0041568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 144","termid":"PBO:0041568"}


id: GO:0060056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The tissue remodeling that removes differentiated mammary epithelia during weaning.","definition_xrefs":["PMID:15282149","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"},{"relation_name":"part_of","term_name":"mammary gland morphogenesis","termid":"GO:0060443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland involution","termid":"GO:0060056"}


id: PR:O13736
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor, arginine/serine-rich 19 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cytoskeleton-regulatory complex protein sla1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.01","secondary_identifiers":["UniProtKB:O13736"],"synonyms":[{"name":"SPAC16E8.01","type":"related"},{"name":"Spom972h-SCAF1","type":"exact"}],"termid":"PR:O13736"}


id: PBO:0072437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 1","termid":"PBO:0072437"}


id: PBO:0002639
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.3.4","termid":"PBO:0002639"}


id: PBO:0061677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 88","termid":"PBO:0061677"}


id: PBO:0029775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_branched,_curved,_elongated_cells_(obsolete_FYPO:0002464)","termid":"PBO:0029775"}


id: PBO:0065931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 5","termid":"PBO:0065931"}


id: PBO:0073731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 1 member 1","termid":"PBO:0073731"}


id: PBO:0088671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex mu subunit Apm4","termid":"PBO:0088671"}


id: MONDO:0019892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 7","termid":"MONDO:0016889"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 7p","secondary_identifiers":["Orphanet:96126","GARD:19325","MEDGEN:1683031","UMLS:C5190515"],"synonyms":[{"name":"distal deletion 7p","type":"exact"},{"name":"distal monosomy type 7p","type":"exact"},{"name":"monosomy 7pter","type":"exact"},{"name":"telomeric deletion 7p","type":"exact"}],"termid":"MONDO:0019892","xrefs":{"Monarch":{"xref_id":"0019892"}}}


id: GO:0042311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in the internal diameter of blood vessels, especially arterioles or capillaries, due to relaxation of smooth muscle cells that line the vessels, and usually resulting in a decrease in blood pressure.","definition_xrefs":["ISBN:0192800981","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel diameter maintenance","termid":"GO:0097746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasodilation","secondary_identifiers":["Wikipedia:Vasodilation","GO:0045909"],"synonyms":[{"name":"positive regulation of blood vessel size","type":"exact"},{"name":"vasodilatation","type":"exact"}],"termid":"GO:0042311"}


id: PBO:0091570
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein Light Intermediate chain","termid":"PBO:0091570"}


id: GO:0001730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP = pppA(2'p5'A)n oligomers. This reaction requires the binding of double-stranded RNA.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"2'-5'-oligoadenylate synthetase activity","secondary_identifiers":["MetaCyc:RXN-13648","Reactome:R-HSA-8985104","EC:2.7.7.84","RHEA:34407","Reactome:R-HSA-8985091","Reactome:R-HSA-8983680"],"synonyms":[{"name":"(2-5')oligo(A) synthetase activity","type":"exact"},{"name":"2'-5' oligoadenylate synthetase activity","type":"exact"},{"name":"2-5A synthetase activity","type":"exact"},{"name":"oligo-2',5'-adenylate synthetase activity","type":"exact"}],"termid":"GO:0001730"}


id: PR:000027549
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:21516229","PMID:15226425","PMID:19965387","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-beta (Schizosaccharomyces pombe 972h-)","termid":"PR:P04910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-beta unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC19G12.06c","synonyms":[{"name":"Spom-HTA2/UnMod","type":"exact"}],"termid":"PR:000027549"}


id: MONDO:0014311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive cerebellar ataxia-epilepsy-intellectual disability syndrome in which the cause of the disease is a mutation in the RUBCN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia - epilepsy - intellectual disability syndrome","termid":"MONDO:0018446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive spinocerebellar ataxia 15","secondary_identifiers":["DOID:0080057","GARD:17678","MEDGEN:816656","Orphanet:404499","UMLS:C3810326","OMIM:615705"],"synonyms":[{"name":"RUBCN autosomal recessive cerebellar ataxia - epilepsy - intellectual disability syndrome","type":"exact"},{"name":"RUBCN autosomal recessive cerebellar ataxia-epilepsy-intellectual disability syndrome","type":"exact"},{"name":"SCAR15","type":"exact"},{"name":"Salih ataxia","type":"related"},{"name":"autosomal recessive cerebellar ataxia - epilepsy - intellectual disability syndrome caused by mutation in RUBCN","type":"exact"},{"name":"autosomal recessive cerebellar ataxia - epilepsy - intellectual disability syndrome due to KIAA0226 deficiency","type":"related"},{"name":"autosomal recessive cerebellar ataxia-epilepsy-intellectual disability syndrome caused by mutation in RUBCN","type":"exact"},{"name":"autosomal recessive cerebellar ataxia-epilepsy-intellectual disability syndrome due to RUBCN deficiency","type":"related"},{"name":"autosomal recessive spinocerebellar ataxia type 15","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 15","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive type 15","type":"exact"}],"termid":"MONDO:0014311","xrefs":{"Monarch":{"xref_id":"0014311"}}}


id: PATO:0001614
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of the bearer's lacking or not exhibiting variation of color.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability of color","termid":"PATO:0001611"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invariant color","termid":"PATO:0001614"}


id: MONDO:0015003
data:
  {"annotated_genes":["SJAG_02007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87344],"is_not":false,"summary":null,"term":"MONDO:0015003"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipoic acid biosynthesis defect","termid":"MONDO:0018424"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0003441"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0002525","MONDO:0004069","MONDO:0003441"],"is_obsolete":false,"name":"dystonia, childhood-onset, with optic atrophy and basal ganglia abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617282","UMLS:C4310634","Orphanet:508093","GARD:13488","DOID:0081419","MEDGEN:934601"],"synonyms":[{"name":"DYTOABG","type":"exact"},{"name":"dystonia 29, childhood-onset","type":"related"},{"name":"dystonia, childhood-onset, with optic atrophy and basal ganglia abnormalities","type":"exact"},{"name":"dystonia, childhood-onset, with optic atrophy and basal ganglia abnormalities; DYTOABG","type":"exact"}],"termid":"MONDO:0015003","terms_by_termid":{"MONDO:0015003":null},"xrefs":{"Monarch":{"xref_id":"0015003"}}}


id: MONDO:0010486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Olmsted syndrome","termid":"MONDO:0031421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Olmsted syndrome, X-linked","secondary_identifiers":["GARD:15273","DOID:0112012","MEDGEN:813075","UMLS:C3806745","OMIM:300918"],"synonyms":[{"name":"Olmsted syndrome, X-linked","type":"exact"},{"name":"Olmsted syndrome, X-linked, X-linked recessive","type":"exact"},{"name":"palmoplantar keratoderma, mutilating, with periorificial keratotic plaques, X-linked","type":"exact"}],"termid":"MONDO:0010486","xrefs":{"Monarch":{"xref_id":"0010486"}}}


id: GO:0016032
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66072],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0075523"}]},"cv_name":"biological_process","definition":"A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.","definition_xrefs":["GOC:bf","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral process","references_by_uniquename":{"GO_REF:0000043":null},"secondary_identifiers":["Wikipedia:Viral_life_cycle","GO:0022415","Reactome:R-HSA-162906"],"synonyms":[{"name":"viral infection","type":"related"},{"name":"virulence","type":"related"},{"name":"virus process","type":"exact"}],"termid":"GO:0016032","terms_by_termid":{"GO:0075523":null}}


id: GO:0070765
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that has aspartic-type endopeptidase activity and contains a presenilin catalytic subunit (either PSEN1 or PSEN2), an APH1 subunit (multiple genes and splice variants exist), nicastrin (NCT), and presenilin enhancer (aka PEN-2 or Psenen), as the core complex. Variants of the complex with different subunit compositions differ in localization and specific substrates. Additionally, variants of the complex exist that contain a additional regulatory subunit as well as the four core subunits; known regulatory subunits include gamma-secretase-activating protein (aka gSAP), TMP1 (aka TMED10), and CD147 antigen (aka basigin). Gamma-secretase cleaves type I transmembrane protein substrates, including the cell surface receptor Notch and the amyloid-beta precursor protein.","definition_xrefs":["PMID:15286082","PMID:15890777","PMID:22122073","PMID:32616437","PMID:25565961","PMID:28320827","PMID:17047368","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"gamma-secretase complex","synonyms":[{"name":"CD147-gamma-secretase complex (APH-1a, PS-1, PEN-2, NCT variant)","type":"narrow"},{"name":"PS1 complex","type":"narrow"},{"name":"PS2 complex","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN1, PSENEN, NCSTN variant)","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN1, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"presenilin complex","type":"exact"}],"termid":"GO:0070765"}


id: GO:0033425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CAU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0060090","GO:0003723"],"is_obsolete":false,"name":"CAU codon-amino acid adaptor activity","synonyms":[{"name":"CAT codon-amino acid adaptor activity","type":"exact"},{"name":"histidine tRNA","type":"related"}],"termid":"GO:0033425"}


id: MONDO:0005616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung carcinoma characterized by the presence of malignant non-keratinizing squamoid cells, mucin-producing cells and intermediate type cells.","definition_xrefs":["NCIT:C45544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"},{"relation_name":"is_a","term_name":"lung colloid adenocarcinoma","termid":"MONDO:0027772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pulmonary mucoepidermoid carcinoma","secondary_identifiers":["ONCOTREE:LUMEC","MEDGEN:310949","UMLS:C1708778","DOID:0050932","EFO:0006740"],"synonyms":[{"name":"lung mucoepidermoid cancer","type":"exact"},{"name":"lung mucoepidermoid carcinoma","type":"exact"},{"name":"mucoepidermoid carcinoma of the lung","type":"related"}],"termid":"MONDO:0005616","xrefs":{"Monarch":{"xref_id":"0005616"}}}


id: FYPO:0006458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects histone modification.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"abnormal histone modification","termid":"FYPO:0006458"}


id: PBO:0079508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 6","termid":"PBO:0079508"}


id: PBO:0040864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix ARNT like 1","termid":"PBO:0040864"}


id: MONDO:0006488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive mixed epithelial and mesenchymal neoplasm that arises from the vagina and is characterized by the presence of a malignant epithelial component and a malignant mesenchymal component.","definition_xrefs":["NCIT:C40278"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"vaginal carcinoma","termid":"MONDO:0015867"},{"relation_name":"is_a","term_name":"malignant vaginal mixed epithelial and mesenchymal neoplasm","termid":"MONDO:0037746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vaginal carcinosarcoma","secondary_identifiers":["MEDGEN:275573","UMLS:C1519918","DOID:136"],"synonyms":[{"name":"malignant vaginal mixed epithelial and mesenchymal tumor","type":"related"},{"name":"malignant vaginal mixed epithelial and mesenchymal tumour","type":"related"},{"name":"vaginal carcinosarcoma","type":"exact"},{"name":"vaginal malignant mixed Mullerian tumor","type":"related"},{"name":"vaginal malignant mixed Mullerian tumour","type":"related"},{"name":"vaginal malignant mixed mesodermal (Mullerian) tumor","type":"related"},{"name":"vaginal malignant mixed mesodermal (Mullerian) tumour","type":"related"},{"name":"vaginal malignant mixed mesodermal (Müllerian) tumor","type":"exact"},{"name":"vaginal malignant mixed mesodermal (Müllerian) tumour","type":"exact"},{"name":"vaginal mixed epithelial and mesenchymal tumor","type":"related"},{"name":"vaginal mixed epithelial and mesenchymal tumour","type":"related"}],"termid":"MONDO:0006488","xrefs":{"Monarch":{"xref_id":"0006488"}}}


id: GO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Replication of rDNA following its excision from the chromosome of dividing cells as they age. Extrachromosomal rDNA forms a circle that contains at least one autonomously replicating sequence (ARS), which supports replication independent of chromosomal replication.","definition_xrefs":["GOC:jh","PMID:12044934"],"gene_count":0,"genotype_count":0,"name":"obsolete replication of extrachromosomal rDNA circles involved in replicative cell aging (obsolete GO:0001312)","synonyms":[{"name":"replication of extrachromosomal rDNA circles during replicative cell ageing","type":"related"},{"name":"replication of extrachromosomal rDNA circles during replicative cell aging","type":"related"},{"name":"replication of extrachromosomal ribosomal DNA circles during replicative cell aging","type":"related"}],"termid":"GO:0001312"}


id: GO:0031948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucocorticoids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucocorticoid metabolic process","termid":"GO:0031945"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid biosynthetic process","termid":"GO:0031946"},{"relation_name":"is_a","term_name":"positive regulation of steroid hormone biosynthetic process","termid":"GO:0090031"},{"relation_name":"positively_regulates","term_name":"glucocorticoid biosynthetic process","termid":"GO:0006704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucocorticoid biosynthetic process","synonyms":[{"name":"activation of glucocorticoid biosynthetic process","type":"narrow"},{"name":"stimulation of glucocorticoid biosynthetic process","type":"narrow"},{"name":"up regulation of glucocorticoid biosynthetic process","type":"exact"},{"name":"up-regulation of glucocorticoid biosynthetic process","type":"exact"},{"name":"upregulation of glucocorticoid biosynthetic process","type":"exact"}],"termid":"GO:0031948"}


id: GO:1903525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane tubulation.","definition_xrefs":["PMID:18388313","GO_REF:0000058","GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane organization","termid":"GO:1903729"},{"relation_name":"regulates","term_name":"plasma membrane tubulation","termid":"GO:0097320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of membrane tubulation","synonyms":[{"name":"regulation of plasma membrane tubulation","type":"exact"},{"name":"regulation of vesicle scission","type":"related"}],"termid":"GO:1903525"}


id: PBO:0067818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 120","termid":"PBO:0067818"}


id: GO:0072292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to metanephric proximal tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration involved in proximal tubule morphogenesis","termid":"GO:0072159"},{"relation_name":"is_a","term_name":"epithelial cell migration involved in metanephric nephron tubule morphogenesis","termid":"GO:0072290"},{"relation_name":"part_of","term_name":"metanephric proximal tubule morphogenesis","termid":"GO:0072288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in metanephric proximal tubule morphogenesis","termid":"GO:0072292"}


id: PBO:0001228
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheochromocytoma","termid":"PBO:0001228"}


id: PR:000050502
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the dis1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG/XMAP215 microtubule plus end tracking polymerase Dis1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC736.14","synonyms":[{"name":"SPCC736.14","type":"related"},{"name":"Spom-dis1","type":"exact"},{"name":"dis1","type":"related"},{"name":"phosphoprotein p99","type":"exact"}],"termid":"PR:000050502"}


id: PBO:0051366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3-34 (pseudogene)","termid":"PBO:0051366"}


id: GO:0010755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of plasminogen activation. Plasminogen activation is the process in which plasminogen is processed to plasmin.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"regulates","term_name":"plasminogen activation","termid":"GO:0031639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"regulation of plasminogen activation","termid":"GO:0010755"}


id: PBO:0072068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 6","termid":"PBO:0072068"}


id: GO:1904052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein targeting to vacuole involved in autophagy.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:PARL","GOC:pad","PMID:22020285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"negative regulation of vacuolar transport","termid":"GO:1903336"},{"relation_name":"is_a","term_name":"regulation of protein targeting to vacuole involved in autophagy","termid":"GO:1904051"},{"relation_name":"negatively_regulates","term_name":"protein targeting to vacuole involved in autophagy","termid":"GO:0071211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006605"}],"interesting_parent_ids":["GO:0006605","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of protein targeting to vacuole involved in autophagy","synonyms":[{"name":"down regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"down-regulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"downregulation of protein targeting to vacuole involved in autophagy","type":"exact"},{"name":"inhibition of protein targeting to vacuole involved in autophagy","type":"narrow"}],"termid":"GO:1904052"}


id: PBO:0029600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sodium:hydrogen_antiporter_activity","termid":"PBO:0029600"}


id: PBO:0076897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 51","termid":"PBO:0076897"}


id: PBO:0113466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the signal peptidase complex (SPC); SPC cleaves the signal sequence from proteins targeted to the endoplasmic reticulum (ER); regulates cellular levels of membrane proteins; homolog of the SPC12 subunit of mammalian signal peptidase complex; protein abundance increases in response to DNA replication stress","termid":"PBO:0113466"}


id: PBO:0004114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transketolase (predicted)","termid":"PBO:0004114"}


id: MONDO:0021486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the ciliary body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary body neoplasm","termid":"MONDO:0021229"},{"relation_name":"is_a","term_name":"benign neoplasm of iris","termid":"MONDO:0021485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"benign neoplasm of ciliary body","secondary_identifiers":["SCTID:92060009","MEDGEN:96927","NCIT:C4779","icd11.foundation:1138156221","UMLS:C0496894","ICD9:224.0"],"synonyms":[{"name":"benign ciliary body neoplasm","type":"exact"},{"name":"benign ciliary body tumor","type":"exact"},{"name":"benign ciliary body tumour","type":"exact"},{"name":"benign neoplasm of the ciliary body","type":"exact"},{"name":"benign tumor of ciliary body","type":"exact"},{"name":"benign tumor of the ciliary body","type":"exact"},{"name":"benign tumour of ciliary body","type":"exact"},{"name":"benign tumour of the ciliary body","type":"exact"},{"name":"ciliary body benign neoplasm","type":"exact"}],"termid":"MONDO:0021486","xrefs":{"Monarch":{"xref_id":"0021486"}}}


id: PR:P46595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P46595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.02","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc4","type":"exact"},{"name":"ubiquitin carrier protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P46595"}


id: FYPO:0006259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the length of the mitotic spindle is normal (i.e. indistinguishable from wild type) during metaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic spindle morphology","termid":"FYPO:0007106"},{"relation_name":"part_of","term_name":"normal mitotic spindle","termid":"FYPO:0001399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic spindle length during metaphase","synonyms":[{"name":"normal mitotic spindle length during metaphase during vegetative growth","type":"exact"},{"name":"normal spindle length during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal spindle length during mitotic metaphase","type":"exact"}],"termid":"FYPO:0006259"}


id: GO:0044305
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The terminal specialization of a calyciferous axon which forms large synapses in the mammalian auditory central nervous system.","definition_xrefs":["PMID:11823805","NIF_Subcellular:sao1684283879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon terminus","termid":"GO:0043679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"calyx of Held","termid":"GO:0044305"}


id: PBO:0003012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo/keto reductase family protein","termid":"PBO:0003012"}


id: PBO:0110417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNCRIP pseudogene 1","termid":"PBO:0110417"}


id: GO:0009877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of nitrogen-fixing root nodules on plant roots.","definition_xrefs":["PMID:21856632","PMID:33317178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nodulation","secondary_identifiers":["GO:0009878"],"synonyms":[{"name":"nodule development","type":"exact"},{"name":"nodule formation","type":"exact"},{"name":"nodule morphogenesis","type":"related"}],"termid":"GO:0009877"}


id: PBO:0059547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Asn (AAU/C)","termid":"PBO:0059547"}


id: FYPO:0000947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a sphere, and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"swollen spheroid vegetative cell","termid":"FYPO:0000945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"swollen spherical vegetative cell","synonyms":[{"name":"enlarged spherical vegetative cell","type":"related"},{"name":"enlarged volume spherical vegetative cell","type":"exact"},{"name":"large spherical vegetative cell","type":"related"},{"name":"spherical vegetative cell with increased cell size","type":"related"},{"name":"spherical vegetative cell with increased cell volume","type":"exact"},{"name":"swollen orb during vegetative growth","type":"exact"},{"name":"swollen spherical cell during vegetative growth","type":"exact"},{"name":"swollen spherical vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000947"}


