# terms

id: PBO:0078737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 1","termid":"PBO:0078737"}


id: FYPO:0000006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any mitotic DNA damage checkpoint is abnormal. A mitotic DNA damage checkpoint normally regulates progression through the mitotic cell cycle in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal response to DNA damage stimulus during vegetative growth","termid":"FYPO:0000157"},{"relation_name":"is_a","term_name":"abnormal mitotic DNA integrity checkpoint","termid":"FYPO:0000643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000298","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic DNA damage checkpoint","synonyms":[{"name":"abnormal DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic DNA damage checkpoint activation","type":"exact"},{"name":"abnormal mitotic DNA damage checkpoint during cellular response to DNA damage","type":"exact"},{"name":"abnormal mitotic DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"mitotic DNA damage checkpoint defects","type":"exact"}],"termid":"FYPO:0000006"}


id: GO:0005713
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense structure that is associated with meiotic chromosomes.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"recombination nodule","termid":"GO:0005713"}


id: FYPO:0004985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form telomeres that become entwined and resistant to separation.","definition_xrefs":["PomBase:mah","PMID:21098121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology during vegetative growth","termid":"FYPO:0002254"},{"relation_name":"is_a","term_name":"abnormal telomere structure","termid":"FYPO:0006510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0000641","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"entangled telomeres during vegetative growth","synonyms":[{"name":"entangled telomeres during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004985"}


id: PBO:0057358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ab","termid":"PBO:0057358"}


id: PBO:0042510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 4","termid":"PBO:0042510"}


id: MONDO:0004493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the testis and is characterized by the presence of numerous papillary structures that are lined by cells with prominent nucleoli.","definition_xrefs":["NCIT:C39928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular yolk sac tumor","termid":"MONDO:0003402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular yolk sac tumor, papillary pattern","secondary_identifiers":["UMLS:C1515310","DOID:8193","MEDGEN:308262"],"synonyms":[{"name":"papillary pattern testicular yolk sac tumor","type":"related"},{"name":"papillary pattern testicular yolk sac tumour","type":"related"},{"name":"testicular yolk sac tumor, papillary pattern","type":"exact"}],"termid":"MONDO:0004493","xrefs":{"Monarch":{"xref_id":"0004493"}}}


id: PBO:0054512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1912","termid":"PBO:0054512"}


id: FYECO:0000100
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing water only.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"water medium","termid":"FYECO:0000100"}


id: GO:0017170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to Ku70, a protein involved in non-homologous DNA end joining.","definition_xrefs":["GOC:mah","PMID:14739985"],"gene_count":0,"genotype_count":0,"name":"obsolete KU70 binding (obsolete GO:0017170)","synonyms":[{"name":"KU70 binding","type":"exact"}],"termid":"GO:0017170"}


id: FYPO:0002895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal during a cellular response to calcium ions. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"increased transcription during cellular response to calcium ion","synonyms":[{"name":"increased transcription during cellular response to calcium","type":"exact"},{"name":"increased transcription during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"increased transcription during cellular response to calcium ion during vegetative growth","type":"exact"},{"name":"increased transcription in response to calcium","type":"exact"}],"termid":"FYPO:0002895"}


id: PBO:0055446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2877","termid":"PBO:0055446"}


id: MONDO:0043731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dissolution of bone that particularly involves the removal or loss of calcium.","definition_xrefs":["MESH:D010014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone resorption disease","termid":"MONDO:0000837"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lytic metastatic bone lesion","secondary_identifiers":["MEDGEN:137065","NCIT:C35371","SCTID:203522001","UMLS:C0302313"],"synonyms":[{"name":"Osteolyses","type":"related"},{"name":"lytic metastatic bone lesion","type":"exact"},{"name":"osteolysis","type":"exact"},{"name":"osteolytic lesion","type":"exact"}],"termid":"MONDO:0043731","xrefs":{"Monarch":{"xref_id":"0043731"}}}


id: MONDO:0007330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital pseudoarthrosis of the clavicle is a rare benign condition, characterized by a painless mass or swelling over the clavicle.","definition_xrefs":["Orphanet:66630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital pseudoarthrosis of clavicle","secondary_identifiers":["OMIM:118980","icd11.foundation:1844778103","GARD:16673","SCTID:70794004","UMLS:C0265565","MEDGEN:75577","MESH:C562548"],"synonyms":[{"name":"clavicle, pseudarthrosis of, congenital","type":"related"},{"name":"congenital pseudarthrosis of the clavicle","type":"exact"},{"name":"congenital pseudoarthrosis of the clavicle","type":"related"}],"termid":"MONDO:0007330","xrefs":{"Monarch":{"xref_id":"0007330"}}}


id: GO:0097427
data:
  {"annotated_genes":["SJAG_02761","SJAG_03540","SJAG_01196","SJAG_02737","SJAG_03073","SJAG_03264","SJAG_04841","SJAG_02624"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905720"},{"annotations":[101773,113150,100714,97608,114429,117331,118545,119059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099070"}]},"cv_name":"cellular_component","definition":"An arrangement of closely apposed microtubules running parallel to each other.","definition_xrefs":["NIF_Subcellular:sao1872343973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01196":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03540":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"microtubule bundle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule fascicle","type":"exact"}],"termid":"GO:0097427","terms_by_termid":{"GO:0099070":null,"GO:1905720":null}}


id: MONDO:0015151
data:
  {"annotated_genes":["SJAG_04228","SJAG_03470"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0021018"},{"annotations":[86122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012034"}]},"cv_name":"mondo","definition":"Autosomal dominant form of limb-girdle muscular dystrophy.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"limb-girdle muscular dystrophy","termid":"MONDO:0016971"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03470":null,"SJAG_04228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"muscular dystrophy, limb-girdle, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0110273","GARD:19824","icd11.foundation:537908479","MEDGEN:1826162","OMIMPS:603511","Orphanet:102014","UMLS:C5675009"],"synonyms":[{"name":"autosomal dominant limb-girdle muscular dystrophy","type":"exact"},{"name":"limb-girdle muscular dystrophy, autosomal dominant","type":"exact"},{"name":"muscular dystrophy, limb-girdle, autosomal dominant","type":"exact"}],"termid":"MONDO:0015151","terms_by_termid":{"MONDO:0012034":null,"MONDO:0021018":null},"xrefs":{"Monarch":{"xref_id":"0015151"}}}


id: PBO:0066469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C 5 pseudogene 1","termid":"PBO:0066469"}


id: PBO:0044049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine and glycine rich protein 2","termid":"PBO:0044049"}


id: GO:0004782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-sulfino-L-alanine = hypotaurine + CO2.","definition_xrefs":["EC:4.1.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"sulfinoalanine decarboxylase activity","secondary_identifiers":["Reactome:R-HSA-1655443","RHEA:16877","MetaCyc:SULFINOALANINE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"3-sulfino-L-alanine carboxy-lyase (hypotaurine-forming)","type":"related"},{"name":"3-sulfino-L-alanine carboxy-lyase activity","type":"related"},{"name":"CADCase/CSADCase activity","type":"related"},{"name":"CSAD","type":"related"},{"name":"CSADCase activity","type":"related"},{"name":"L-cysteinesulfinic acid decarboxylase activity","type":"related"},{"name":"cysteic decarboxylase activity","type":"related"},{"name":"cysteine-sulfinate decarboxylase activity","type":"related"},{"name":"cysteinesulfinate decarboxylase activity","type":"related"},{"name":"cysteinesulfinic acid decarboxylase activity","type":"related"},{"name":"sulfoalanine decarboxylase activity","type":"related"},{"name":"sulphinoalanine decarboxylase activity","type":"exact"}],"termid":"GO:0004782"}


id: GO:0044061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of excretion, the elimination by the host organism of the waste products that arise as a result of metabolic activity.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host excretion (obsolete GO:0044061)","synonyms":[{"name":"regulation by symbiont of host excretion","type":"exact"}],"termid":"GO:0044061"}


id: GO:0048166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stage in oogenesis when the antrum is swollen with follicular fluid. The ovum is ready to erupt from the ovary and is arrested at metaphase of the second meiotic division.","definition_xrefs":["ISBN:0198542771","GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammalian oogenesis stage","termid":"GO:0022605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature follicle stage","synonyms":[{"name":"mammalian oogenesis stage 9","type":"exact"}],"termid":"GO:0048166"}


id: PBO:0049181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GREM1 antisense RNA 1","termid":"PBO:0049181"}


id: MONDO:0003281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma that arises from the ovary and is characterized by the presence of cystic structures. Representative example is the dermoid cyst.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mature ovarian teratoma","termid":"MONDO:0003820"},{"relation_name":"is_a","term_name":"cystic teratoma","termid":"MONDO:0002379"},{"relation_name":"is_a","term_name":"ovarian germ cell tumor","termid":"MONDO:0011366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian cystic teratoma","secondary_identifiers":["DOID:5118","MEDGEN:235415","NCIT:C7283","UMLS:C1335155"],"synonyms":[{"name":"ovary cystic teratoma","type":"exact"}],"termid":"MONDO:0003281","xrefs":{"Monarch":{"xref_id":"0003281"}}}


id: PBO:0111932
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIT family","termid":"PBO:0111932"}


id: GO:0141025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to its host by binding to a glycoprotein on the host cell surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17630833","PMID:12010488","PMID:15487949","PMID:29184850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host cell surface via host glycoprotein","termid":"GO:0141025"}


id: PBO:0064029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 63","termid":"PBO:0064029"}


id: FYPO:0000117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septum assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis during vegetative growth","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0000032","FYPO:0005447"],"is_obsolete":false,"name":"abnormal septum assembly","secondary_identifiers":["FYPO:0000170"],"synonyms":[{"name":"abnormal division septum assembly","type":"exact"},{"name":"abnormal division septum formation involved in mitotic cytokinesis","type":"exact"},{"name":"abnormal septation","type":"broad"},{"name":"abnormal septum assembly during mitotic cell cycle","type":"related"},{"name":"abnormal septum assembly during vegetative growth","type":"exact"},{"name":"septation defects","type":"broad"},{"name":"septum formation: abnormal","type":"related"}],"termid":"FYPO:0000117"}


id: PBO:0075411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm acrosome associated 7","termid":"PBO:0075411"}


id: GO:0061780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The protein localization to chromatin by which a cohesin ring complex is topologically linked to DNA as part of the mitotic cell cycle.","definition_xrefs":["GOC:vw","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cohesin loading (obsolete GO:0061780)","termid":"GO:0061780"}


id: GO:0016024
data:
  {"annotated_genes":["SJAG_03563","SJAG_01233","SJAG_00168","SJAG_00426"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80403,113401,115062,119541],"is_not":false,"summary":null,"term":"GO:0016024"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of CDP-diacylglycerol, CDP-1,2-diacylglycerol, a substance composed of diacylglycerol in glycosidic linkage with cytidine diphosphate.","definition_xrefs":["PMID:24533860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-diacylglycerol metabolic process","termid":"GO:0046341"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00426":null,"SJAG_01233":null,"SJAG_03563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"CDP-diacylglycerol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25318672":null},"synonyms":[{"name":"CDP-diacylglycerol anabolism","type":"exact"},{"name":"CDP-diacylglycerol biosynthesis","type":"exact"},{"name":"CDP-diacylglycerol formation","type":"exact"},{"name":"CDP-diacylglycerol synthesis","type":"exact"}],"termid":"GO:0016024","terms_by_termid":{"GO:0016024":null}}


id: PBO:0042883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 276","termid":"PBO:0042883"}


id: PBO:0089190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHD family chromatin remodeller Hrp3","termid":"PBO:0089190"}


id: SO:0002279
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The hAT terminal inverted repeat transposon superfamily elements were first found in maize (the Ac/Ds elements). Members of the hAT superfamily have TSDs of 8 bp, relatively short TIRs of 5–27 bp and overall lengths of less than 4 kb.","definition_xrefs":["PMID:11454746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hAT_TIR_transposon","synonyms":[{"name":"Ac transposon","type":"exact"},{"name":"Ac/Ds transposon","type":"exact"},{"name":"DTA transposon","type":"exact"},{"name":"Ds transposon","type":"exact"},{"name":"hAT TIR transposon","type":"exact"},{"name":"hAT transposon","type":"exact"},{"name":"hAT-Ac transposon","type":"exact"}],"termid":"SO:0002279"}


id: GO:0018512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,6-dihydroxy-5-methylcyclohexa-2,4-dienecarboxylate + NAD+ = 3-methylcatechol + CO2 + NADH + H+.","definition_xrefs":["EC:1.3.1.59"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,6-dihydroxy-5-methylcyclohexa-2,4-dienecarboxylate dehydrogenase activity (obsolete GO:0018512)","synonyms":[{"name":"1,2-dihydroxy-3-methylcyclohexa-3,5-diene-carboxylate dehydrogenase activity","type":"exact"},{"name":"1,6-dihydroxy-5-methylcyclohexa-2,4-dienecarboxylate dehydrogenase activity","type":"exact"}],"termid":"GO:0018512"}


id: PBO:0087604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CCR4-NOT transcriptional regulatory complex; CCR4-NOT complex is evolutionarily-conserved and involved in controlling mRNA initiation, elongation, and degradation","termid":"PBO:0087604"}


id: PBO:0060182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 3A, cell surface associated","termid":"PBO:0060182"}


id: GO:0120310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphological, biochemical and genetic changes that induce the differentiation of metacyclic parasites into amastigotes in some of the Trypanosomatidae species such as Leishmania parasites and Trypanosoma cruzi. This process occurs inside the cells of the mammalian hosts, particularly in macrophages and other phagocytic cells for Leishmania parasites.","definition_xrefs":["PMID:12377273","PMID:13129524","GOC:krc","PMID:26752404","GOC:ach","DOI:10.5772/intechopen.84639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of symbiont in host","termid":"GO:0044114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amastigogenesis","termid":"GO:0120310"}


id: GO:0060499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a fibroblast growth factor-type receptor binding to one of its physiological ligands resulting in the formation of the lung bud along the lateral-esophageal sulcus.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete fibroblast growth factor receptor signaling pathway involved in lung induction (obsolete GO:0060499)","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in lung induction","type":"exact"}],"termid":"GO:0060499"}


id: PBO:0069187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 441, pseudogene","termid":"PBO:0069187"}


id: PBO:0054056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1398","termid":"PBO:0054056"}


id: FYPO:0006750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more transfer RNA precursor(s) (pre-tRNA) measured in a cell that is subject to nitrogen starvation is normal (i.e. indistinguishable from wild type). Total pre-tRNA or a specific pre-tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during nitrogen starvation","termid":"FYPO:0001096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal pre-tRNA level during nitrogen starvation","synonyms":[{"name":"normal pre-tRNA accumulation during nitrogen starvation","type":"related"},{"name":"normal pre-tRNA level during nitrogen depletion","type":"exact"},{"name":"normal pre-tRNA level during nitrogen deprivation","type":"exact"},{"name":"normal pre-tRNA transcript level during nitrogen starvation","type":"exact"},{"name":"normal tRNA level during nitrogen starvation","type":"broad"},{"name":"normal tRNA primary transcript level during nitrogen starvation","type":"exact"},{"name":"normal transfer RNA precursor level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006750"}


id: GO:0050351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + trimetaphosphate = 2 H+ + triphosphate.","definition_xrefs":["EC:3.6.1.2","RHEA:11088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trimetaphosphatase activity","secondary_identifiers":["KEGG_REACTION:R02504","MetaCyc:TRIMETAPHOSPHATASE-RXN"],"synonyms":[{"name":"inorganic trimetaphosphatase activity","type":"related"},{"name":"trimetaphosphate hydrolase activity","type":"related"}],"termid":"GO:0050351"}


id: PBO:0047257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 241 member B","termid":"PBO:0047257"}


id: GO:0015718
data:
  {"annotated_genes":["SJAG_04905","SJAG_01924","SJAG_02779","SJAG_00671","SJAG_01505","SJAG_05175","SJAG_04920","SJAG_00276","SJAG_04593","SJAG_02780","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72167,79578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"},{"annotations":[92389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905136"},{"annotations":[92821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140270"},{"annotations":[88733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990556"},{"annotations":[72872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098717"},{"annotations":[93668,76951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990536"},{"annotations":[99028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006847"},{"annotations":[90251],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0035432"},{"annotations":[77105,63126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006850"}]},"cv_name":"biological_process","definition":"The directed movement of monocarboxylic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_00671":null,"SJAG_01505":null,"SJAG_01924":null,"SJAG_01960":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_04593":null,"SJAG_04905":null,"SJAG_04920":null,"SJAG_05175":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"monocarboxylic acid transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015718","terms_by_termid":{"GO:0006847":null,"GO:0006850":null,"GO:0035432":null,"GO:0098717":null,"GO:0140270":null,"GO:1905135":null,"GO:1905136":null,"GO:1990536":null,"GO:1990556":null}}


id: PR:Q9P7S7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar protein 58 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10894:SF0","OMA:SCHPO00338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 58 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.06","secondary_identifiers":["UniProtKB:Q9P7S7"],"synonyms":[{"name":"Spom972h-NOP58","type":"exact"}],"termid":"PR:Q9P7S7"}


id: PBO:0072501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 30","termid":"PBO:0072501"}


id: PATO:0001822
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of whether the bearer's being covered by a liquid.","definition_xrefs":["wordreference.com:wordreference.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wetness","termid":"PATO:0001822"}


id: PBO:0091687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element (with segmental deletion) Wtf2","termid":"PBO:0091687"}


id: GO:0051261
data:
  {"annotated_genes":["SJAG_03025","SJAG_01993","SJAG_04841","SJAG_03380","SJAG_05296","SJAG_02336","SJAG_01297","SJAG_00279","SJAG_01224","SJAG_02624","SJAG_04312","SJAG_00723","SJAG_02700","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70363,73781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[76683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[92654,80536,79503,76055],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[80067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072318"},{"annotations":[98951,118551,89945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007019"},{"annotations":[104243,108632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070462"},{"annotations":[102191],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"The process in which protein polymers, compounds composed of a large number of component monomers, are broken down. Depolymerization occurs by the successive removal of monomers from an existing poly- or oligomeric protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00723":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02336":null,"SJAG_02624":null,"SJAG_02700":null,"SJAG_03025":null,"SJAG_03380":null,"SJAG_04312":null,"SJAG_04841":null,"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein depolymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein polymer breakdown","type":"exact"},{"name":"protein polymer catabolic process","type":"exact"},{"name":"protein polymer catabolism","type":"exact"},{"name":"protein polymer degradation","type":"exact"}],"termid":"GO:0051261","terms_by_termid":{"GO:0007019":null,"GO:0030042":null,"GO:0031117":null,"GO:0051016":null,"GO:0060172":null,"GO:0070462":null,"GO:0072318":null}}


id: GO:0008633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The conversion of proteins that induce or sustain apoptosis to an active form.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of pro-apoptotic gene products (obsolete GO:0008633)","synonyms":[{"name":"activation of pro-apoptotic gene products","type":"exact"},{"name":"induction of pro-apoptotic gene products","type":"related"}],"termid":"GO:0008633"}


id: GO:0048438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a floral whorl over time, from its formation to the mature structure. A floral whorl is a circular arrangement of parts of a flower arising from a stem of a plant.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:PO_curators","GOC:dph","PO:0025023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral whorl development","secondary_identifiers":["GO:0048413"],"synonyms":[{"name":"collective phyllome structure development","type":"broad"}],"termid":"GO:0048438"}


id: FYPO:0006742
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more MluI cell cycle box factor elements (MCBs) is normal (i.e. indistinguishable from wild type) in extent, timing, start or termination site, etc.","definition_xrefs":["PomBase:mah","PMID:30134042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal transcription from MCB promoter","synonyms":[{"name":"normal expression of MBF target genes","type":"related"},{"name":"normal transcription from MCB promoter during mitotic cell cycle","type":"related"},{"name":"normal transcription from MCB promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0006742"}


id: MONDO:0958354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central precocious puberty","termid":"MONDO:0019165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genetic central precocious puberty in female","secondary_identifiers":["Orphanet:650077","MEDGEN:1853156","UMLS:C5816765"],"termid":"MONDO:0958354","xrefs":{"Monarch":{"xref_id":"0958354"}}}


id: FYPO:0003360
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which superoxide dismutase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal superoxide dismutase activity","termid":"FYPO:0003281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000652","FYPO:0005447","FYPO:0000707","FYPO:0000654","FYPO:0000298","FYPO:0000661"],"is_obsolete":false,"name":"abolished superoxide dismutase activity","synonyms":[{"name":"superoxide dismutase activity abolished","type":"exact"}],"termid":"FYPO:0003360"}


id: MONDO:0023011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilson-Mikity syndrome","secondary_identifiers":["MEDGEN:78714","icd11.foundation:846899990","SCTID:51577008","UMLS:C0270171","GARD:10495"],"synonyms":[{"name":"Pulmonary dysmaturity","type":"related"},{"name":"Pulmonary dysmaturity syndrome","type":"related"},{"name":"Wilson-Mikity syndrome","type":"exact"},{"name":"pulmonary dysmaturity","type":"related"},{"name":"wilson-mikity syndrome","type":"exact"}],"termid":"MONDO:0023011","xrefs":{"Monarch":{"xref_id":"0023011"}}}


id: PBO:0088923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane associated ubiquitin-protein ligase E3, MARCH family","termid":"PBO:0088923"}


id: GO:0003715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that brings about termination of transcription.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription termination factor activity (obsolete GO:0003715)","synonyms":[{"name":"transcription termination factor activity","type":"exact"},{"name":"transcriptional termination factor activity","type":"exact"}],"termid":"GO:0003715"}


id: PR:O74325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1685.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain-containing protein C1685.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.05","synonyms":[{"name":"Spom972h-SPBC1685.05","type":"exact"}],"termid":"PR:O74325"}


id: PBO:0038632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA:amino acid N-acyltransferase pseudogene","termid":"PBO:0038632"}


id: GO:0003786
data:
  {"annotated_genes":["SJAG_04621"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77567],"is_not":false,"summary":null,"term":"GO:0003786"}]},"cv_name":"molecular_function","definition":"Binding to an actin filament along its length.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament binding","termid":"GO:0051015"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003779"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003779","GO:0008092","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"actin lateral binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0003786","terms_by_termid":{"GO:0003786":null}}


id: PBO:0071884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 22","termid":"PBO:0071884"}


id: FYPO:0001533
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to zinc starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to zinc starvation","synonyms":[{"name":"decreased growth during cellular response to zinc starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to zinc starvation","type":"exact"},{"name":"hypersensitive to zinc starvation","type":"exact"},{"name":"sensitive to zinc depletion","type":"exact"},{"name":"sensitive to zinc deprivation","type":"exact"},{"name":"sensitive to zinc ion starvation","type":"exact"},{"name":"sensitive to zinc starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to zinc starvation during vegetative growth","type":"exact"}],"termid":"FYPO:0001533"}


id: PBO:0054993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2408","termid":"PBO:0054993"}


id: MONDO:0020431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juxtaposition of the atrial appendages is a rare atrial appendage anomaly when both appendages are located on the left or the right side of the great arteries. It is asymptomatic and is usually diagnosed incidentally, but is frequently associated with other congenital heart diseases.","definition_xrefs":["Orphanet:99100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juxtaposition of the atrial appendages","secondary_identifiers":["MEDGEN:712843","UMLS:C1290478","GARD:19648"],"synonyms":[{"name":"juxtaposition of the atrial auricles","type":"exact"}],"termid":"MONDO:0020431","xrefs":{"Monarch":{"xref_id":"0020431"}}}


id: MONDO:0008412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intestinal infection that is caused by Schistosoma japonicum.","definition_xrefs":["NCIT:C35001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schistosomiasis","termid":"MONDO:0015254"},{"relation_name":"is_a","term_name":"intestinal helminthiasis","termid":"MONDO:0024271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal schistosomiasis","secondary_identifiers":["SCTID:52179003","MEDGEN:116602","SCTID:268058007","ICD9:120.1","NCIT:C35364","SCTID:240796008","SCTID:750009","NCIT:C35002","ICD9:120.2","UMLS:C0242497","DOID:0050597","MESH:D012554","MESH:D012555"],"synonyms":[{"name":"Katayama fever","type":"exact"},{"name":"Schistosoma mansoni infection, susceptibility/resistance to","type":"related"},{"name":"Schistosoma mansoni, intensity of infection by","type":"related"},{"name":"schistosomiasis japonica","type":"exact"}],"termid":"MONDO:0008412","xrefs":{"Monarch":{"xref_id":"0008412"}}}


id: MONDO:1010632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor VII deficiency that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor VII deficiency, non-human animal","termid":"MONDO:1010071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor VII deficiency, dog","secondary_identifiers":["OMIA:000361-9615"],"termid":"MONDO:1010632","xrefs":{"Monarch":{"xref_id":"1010632"}}}


id: GO:0140986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a chemorepellent binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. cytoskeleton reorganization.","definition_xrefs":["PMID:30462573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled chemorepellent receptor signaling pathway","termid":"GO:0140986"}


id: PBO:0018043
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POlyPloidy","termid":"PBO:0018043"}


id: MONDO:0017065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida aperta","termid":"MONDO:0017062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lumbosacral spina bifida aperta","secondary_identifiers":["GARD:20954","icd11.foundation:417689735","Orphanet:268388","UMLS:C5439434","MEDGEN:1748032"],"termid":"MONDO:0017065","xrefs":{"Monarch":{"xref_id":"0017065"}}}


id: MONDO:0014523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile-onset diabetes mellitus-central and peripheral neurodegeneration syndrome","secondary_identifiers":["GARD:17768","Orphanet:445062","OMIM:616192","UMLS:C4015436","MEDGEN:863873"],"synonyms":[{"name":"ACPHD","type":"related"},{"name":"ataxia, combined cerebellar and peripheral, with hearing loss and diabetes mellitus","type":"related"},{"name":"combined cerebellar and peripheral ataxia-hearing loss-diabetes mellitus syndrome","type":"exact"}],"termid":"MONDO:0014523","xrefs":{"Monarch":{"xref_id":"0014523"}}}


id: GO:0004118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate; catalytic activity is increased in the presence of cGMP.","definition_xrefs":["PMID:35216259","GOC:mah","PMID:15210692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3',5'-cGMP-stimulated cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004118"}


id: GO:0160139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(2605) in 23S rRNA = pseudouridine(2605) in 23S rRNA.","definition_xrefs":["EC:5.4.99.22","RHEA:42520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"23S rRNA pseudouridine(2605) synthase activity","termid":"GO:0160139"}


id: GO:0009937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gibberellic acid mediated signaling.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"gibberellic acid mediated signaling pathway","termid":"GO:0009740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of gibberellic acid mediated signaling pathway","synonyms":[{"name":"regulation of gibberellic acid mediated signalling","type":"exact"}],"termid":"GO:0009937"}


id: PBO:0048951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT2 pseudogene 2","termid":"PBO:0048951"}


id: FYPO:0006946
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is swollen, is elongated, and contains more than one septum. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multiseptate vegetative cell","termid":"FYPO:0001494"},{"relation_name":"is_a","term_name":"inviable swollen elongated septated vegetative cell","termid":"FYPO:0002845"},{"relation_name":"is_a","term_name":"swollen elongated multiseptate vegetative cell","termid":"FYPO:0007436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000005","FYPO:0000004","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"inviable swollen elongated multiseptate vegetative cell","synonyms":[{"name":"inviable large elongated multiseptate vegetative cell","type":"related"},{"name":"lethal; swollen elongated multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0006946"}


id: GO:0030731
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanidinoacetate = S-adenosyl-L-homocysteine + creatine + H+.","definition_xrefs":["RHEA:10656","EC:2.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"guanidinoacetate N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01883","MetaCyc:GUANIDINOACETATE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"GA methylpherase activity","type":"related"},{"name":"S-adenosyl-L-methionine:N-guanidinoacetate methyltransferase activity","type":"related"},{"name":"guanidinoacetate methyltransferase activity","type":"related"},{"name":"guanidinoacetate transmethylase activity","type":"related"},{"name":"guanidoacetate methyltransferase activity","type":"related"},{"name":"methionine-guanidinoacetic transmethylase activity","type":"related"}],"termid":"GO:0030731"}


id: PBO:0085699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in retrograde transport to the cis-Golgi network; forms heterodimer with Rgp1p that acts as a GTP exchange factor for Ypt6p; involved in transcription of rRNA and ribosomal protein genes","termid":"PBO:0085699"}


id: MONDO:0015287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vulvar intraepithelial neoplasia (obsolete MONDO:0015287)","termid":"MONDO:0015287","xrefs":{"Monarch":{"xref_id":"0015287"}}}


id: MONDO:0043174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pfeiffer Tietze Welte syndrome","secondary_identifiers":["UMLS:C2931657","MEDGEN:419859","MESH:C537891"],"synonyms":[{"name":"sagittal craniostenosis, bilateral coloboma of the iris, craniofacial dysmorphy, asymmetrical split hand malformation, bilateral syndactyly of 2nd-4th","type":"related"}],"termid":"MONDO:0043174","xrefs":{"Monarch":{"xref_id":"0043174"}}}


id: PBO:0002298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease kappa ortholog (predicted)","termid":"PBO:0002298"}


id: PBO:0041452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 putative open reading frame 55","termid":"PBO:0041452"}


id: PBO:0044543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAOA antisense RNA 1","termid":"PBO:0044543"}


id: PR:000050457
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protection of telomeres protein tpz1 (Schizosaccharomyces pombe 972h-) that has been post-translationally modified to include sumoylated lysine at position 242 of the amino acid sequence represented by UniProtKB:Q13426. UniProtKB:O14246, Lys-242, MOD:01149.","definition_xrefs":["PMID:24925530","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sumoylated protein","termid":"PR:000037078"},{"relation_name":"is_a","term_name":"protection of telomeres protein tpz1 (Schizosaccharomyces pombe 972h-)","termid":"PR:O14246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tpz1/Sumo(K242)","pombase_gene_id":"SPAC6F6.16c","synonyms":[{"name":"PomBase_original_PRO_term_name: protection of telomeres protein tpz1 sumoylated 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tpz1/Sumo(K242)","type":"exact"}],"termid":"PR:000050457"}


id: PBO:0053146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A pseudogene 2","termid":"PBO:0053146"}


id: PBO:0088202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc transporter; localizes to the ER; null mutant is sensitive to calcofluor white, leads to zinc accumulation in cytosol; ortholog of the mouse KE4 and member of the ZIP (ZRT, IRT-like Protein) family","termid":"PBO:0088202"}


id: MONDO:0030916
data:
  {"annotated_genes":["SJAG_02920","SJAG_04179"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85452,85453],"is_not":false,"summary":null,"term":"MONDO:0030916"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02920":null,"SJAG_04179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 50","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1616989","UMLS:C4540470","DOID:0080233","OMIM:617787"],"synonyms":[{"name":"MRD50","type":"related"},{"name":"autosomal dominant intellectual disability 50","type":"related"},{"name":"autosomal dominant mental retardation 50","type":"related"},{"name":"intellectual developmental disorder, autosomal dominant 50, with behavioral abnormalities","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 50, with behavioural abnormalities","type":"exact"},{"name":"intellectual disability, autosomal dominant 50","type":"exact"},{"name":"mental retardation, autosomal dominant 50","type":"related"}],"termid":"MONDO:0030916","terms_by_termid":{"MONDO:0030916":null},"xrefs":{"Monarch":{"xref_id":"0030916"}}}


id: GO:0042971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of lactone from one side of a membrane to the other. A lactone is a cyclic ester of a hydroxy carboxylic acid, containing a 1-oxacycloalkan-2-one structure, or an analogue having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lactone transmembrane transporter activity (obsolete GO:0042971)","termid":"GO:0042971"}


id: MOD:00987
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-tyrosine residue with a chlorine atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated residue","termid":"MOD:00753"},{"relation_name":"is_a","term_name":"halogenated tyrosine","termid":"MOD:00985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chlorinated tyrosine","synonyms":[{"name":"ClTyr","type":"exact"}],"termid":"MOD:00987"}


id: PBO:0061286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 7","termid":"PBO:0061286"}


id: MONDO:1010661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thrombocytopenia that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia, non-human animal","termid":"MONDO:1010080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombocytopenia, horse","secondary_identifiers":["OMIA:001001-9796"],"termid":"MONDO:1010661","xrefs":{"Monarch":{"xref_id":"1010661"}}}


id: PBO:0028569
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleotide-excision_repair_during_cellular_response_to_UV","termid":"PBO:0028569"}


id: PBO:0075951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG3L5P-PVRIG2P-PILRB readthrough","termid":"PBO:0075951"}


id: PBO:0047508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fer3 like bHLH transcription factor","termid":"PBO:0047508"}


id: PR:Q10486
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17C9.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17C9.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.15c","synonyms":[{"name":"Spom972h-SPAC17C9.15c","type":"exact"}],"termid":"PR:Q10486"}


id: PBO:0066911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 212","termid":"PBO:0066911"}


id: PBO:0017488
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-positively_regulates","termid":"PBO:0017488"}


id: GO:0006157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyadenosine metabolic process","termid":"GO:0046090"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside catabolic process","termid":"GO:0046124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"deoxyadenosine catabolic process","secondary_identifiers":["GO:0006159"],"synonyms":[{"name":"deoxyadenosine breakdown","type":"exact"},{"name":"deoxyadenosine catabolism","type":"exact"},{"name":"deoxyadenosine degradation","type":"exact"},{"name":"deoxyadenosine phosphorolysis","type":"related"}],"termid":"GO:0006157"}


id: MONDO:0020121
data:
  {"annotated_genes":["SJAG_02043","SJAG_02919","SJAG_00831","SJAG_01918","SJAG_02396","SJAG_04316","SJAG_04228","SJAG_02431","SJAG_03188","SJAG_04053","SJAG_03703","SJAG_00804","SJAG_03715","SJAG_03815","SJAG_05219","SJAG_04567","SJAG_00044","SJAG_02096","SJAG_03470","SJAG_02103","SJAG_01491","SJAG_04601","SJAG_03145","SJAG_04003","SJAG_01939"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0021018"},{"annotations":[86122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012034"},{"annotations":[85532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[86997,86998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[86279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[85624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014023"},{"annotations":[86463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014896"},{"annotations":[86215,86214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"},{"annotations":[85496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013049"},{"annotations":[86484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008030"},{"annotations":[87097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010912"},{"annotations":[86680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011246"},{"annotations":[86092,86091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009682"},{"annotations":[86898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957270"},{"annotations":[86186,86184,86185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[86272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[86991,86992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013154"},{"annotations":[85584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033556"},{"annotations":[86996],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013159"},{"annotations":[86277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014141"},{"annotations":[86994,86995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013160"},{"annotations":[85595,85594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008050"},{"annotations":[86540,86539,86538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012130"},{"annotations":[86436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014877"},{"annotations":[86576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011266"},{"annotations":[85955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958176"},{"annotations":[86130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014800"},{"annotations":[85776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010684"}]},"cv_name":"mondo","definition":"Muscular dystrophy (MD) refers to a group of more than 30 genetic diseases characterized by progressive weakness and degeneration of the skeletal muscles that control movement. Some forms of MD are seen in newborns, infants or children, while others have late-onset and may not appear until middle age or later. The disorders differ in terms of the distribution and extent of muscle weakness (some forms of MD also affect cardiac muscle), age of onset, rate of progression, and pattern of inheritance. The prognosis for people with MD varies according to the type and progression of the disorder. There is no specific treatment to stop or reverse any form of MD. Treatment is supportive and may include physical therapy, respiratory therapy, speech therapy, orthopedic appliances used for support, corrective orthopedic surgery, and medicationsincluding corticosteroids, anticonvulsants (seizure medications), immunosuppressants, and antibiotics. Some individuals may need assisted ventilation to treat respiratory muscle weaknessor a pacemaker for cardiac (heart)abnormalities.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pulmonary disease, chronic obstructive, susceptibility to","termid":"MONDO:0100167"},{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00804":null,"SJAG_00831":null,"SJAG_01491":null,"SJAG_01918":null,"SJAG_01939":null,"SJAG_02043":null,"SJAG_02096":null,"SJAG_02103":null,"SJAG_02396":null,"SJAG_02431":null,"SJAG_02919":null,"SJAG_03145":null,"SJAG_03188":null,"SJAG_03470":null,"SJAG_03703":null,"SJAG_03715":null,"SJAG_03815":null,"SJAG_04003":null,"SJAG_04053":null,"SJAG_04228":null,"SJAG_04316":null,"SJAG_04567":null,"SJAG_04601":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:44527","icd11.foundation:1464662404","ICD10CM:G71.0","MESH:D009136","Orphanet:98473","ICD9:359.1","NANDO:2100233","MedDRA:10028356","NCIT:C84910","SCTID:73297009","UMLS:C0026850","DOID:9884","GARD:7922","NANDO:1200486"],"termid":"MONDO:0020121","terms_by_termid":{"MONDO:0008030":null,"MONDO:0008050":null,"MONDO:0008409":null,"MONDO:0009364":null,"MONDO:0009682":null,"MONDO:0010684":null,"MONDO:0010912":null,"MONDO:0011246":null,"MONDO:0011266":null,"MONDO:0012034":null,"MONDO:0012130":null,"MONDO:0012248":null,"MONDO:0013049":null,"MONDO:0013154":null,"MONDO:0013159":null,"MONDO:0013160":null,"MONDO:0013162":null,"MONDO:0014023":null,"MONDO:0014140":null,"MONDO:0014141":null,"MONDO:0014142":null,"MONDO:0014800":null,"MONDO:0014877":null,"MONDO:0014896":null,"MONDO:0021018":null,"MONDO:0033556":null,"MONDO:0957270":null,"MONDO:0958176":null},"xrefs":{"Monarch":{"xref_id":"0020121"}}}


id: PBO:0076080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"striatin interacting protein 2","termid":"PBO:0076080"}


id: MONDO:0014783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any preimplantation embryonic lethality in which the cause of the disease is a mutation in the TLE6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"gene_count":0,"genotype_count":0,"name":"obsolete preimplantation embryonic lethality 1 (obsolete MONDO:0014783)","secondary_identifiers":["OMIM:616814"],"synonyms":[{"name":"PREMBL1","type":"exact"},{"name":"Prembl","type":"related"},{"name":"TLE6 preimplantation embryonic lethality","type":"exact"},{"name":"preimplantation embryonic lethality","type":"broad"},{"name":"preimplantation embryonic lethality 1","type":"exact"},{"name":"preimplantation embryonic lethality 1; PREMBL1","type":"exact"},{"name":"preimplantation embryonic lethality caused by mutation in TLE6","type":"exact"},{"name":"preimplantation embryonic lethality type 1","type":"exact"}],"termid":"MONDO:0014783","xrefs":{"Monarch":{"xref_id":"0014783"}}}


id: GO:0070785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the process in which cells remain attached after division and form thread-like filaments that may penetrate into a solid growth medium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900429"},{"relation_name":"negatively_regulates","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070785"}


id: PBO:0090835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane iron transmembrane transporter Fip1","termid":"PBO:0090835"}


id: PBO:0089621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apl6","termid":"PBO:0089621"}


id: PR:Q9USM5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp1 gene.","definition_xrefs":["UniProtKB:Q9USM5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase Ubp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.12c","synonyms":[{"name":"SPCC16A11.12c","type":"related"},{"name":"Spom972h-ubp1","type":"exact"},{"name":"deubiquitinating enzyme 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin carboxyl-terminal hydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"related"},{"name":"ubiquitin thioesterase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USM5"}


id: PBO:0081661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF584 divergent transcript","termid":"PBO:0081661"}


id: PBO:0076715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 21","termid":"PBO:0076715"}


id: MONDO:0001183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal edema","termid":"MONDO:0006712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"contact lens corneal edema","secondary_identifiers":["DOID:11034","MEDGEN:633950","UMLS:C0474442","SCTID:49362009","ICD9:371.24"],"termid":"MONDO:0001183","xrefs":{"Monarch":{"xref_id":"0001183"}}}


id: MONDO:0021838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease characterized by cherubism (disorder characterized by abnormal bone tissue in the lower part of the face. Beginning in early childhood, both the lower jaw (the mandible) and the upper jaw (the maxilla) become enlarged as bone is replaced with painless, cyst-like growths.), visual impairment due to optic atrophy and short stature. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["PMID:8281276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"cherubism","termid":"MONDO:0007315"},{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy","termid":"MONDO:0020250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"Al Gazali Khidr Prem Chandran syndrome","secondary_identifiers":["UMLS:C2930951","MESH:C535616","GARD:586","MEDGEN:419678"],"synonyms":[{"name":"cherubism, optic atrophy and short stature","type":"related"}],"termid":"MONDO:0021838","xrefs":{"Monarch":{"xref_id":"0021838"}}}


id: MONDO:0859155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1p36 deletion syndrome, proximal","secondary_identifiers":["OMIM:619343","UMLS:C5562114","MEDGEN:1794324"],"termid":"MONDO:0859155","xrefs":{"Monarch":{"xref_id":"0859155"}}}


id: PBO:0044530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DACT3 antisense RNA 1","termid":"PBO:0044530"}


id: GO:0050596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + vinorine = H2O + NADP+ + vomilenine.","definition_xrefs":["EC:1.14.14.104","RHEA:17257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"vinorine hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.13.75-RXN","KEGG_REACTION:R05877"],"synonyms":[{"name":"vinorine,NADPH:oxygen oxidoreductase (21alpha-hydroxylating)","type":"related"}],"termid":"GO:0050596"}


id: FYPO:0007275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitochondrion inheritance is abnormal during the meiotic cell cycle. Mitochondrion inheritance is a cellular process that results in the distribution of mitochondria into daughter cells after mitosis or meiosis, mediated by interactions between mitochondria and the cytoskeleton.","definition_xrefs":["PomBase:mah","GO:0000001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"},{"relation_name":"is_a","term_name":"abnormal mitochondrion inheritance","termid":"FYPO:0007274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitochondrion inheritance during meiotic cell cycle","synonyms":[{"name":"abnormal mitochondrial inheritance during meiotic cell cycle","type":"exact"},{"name":"abnormal mitochondrion inheritance during meiosis","type":"related"}],"termid":"FYPO:0007275"}


id: GO:0140831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(in) + L-asparagine(out) + Na+(out) = H+(out) + L-asparagine(in) + Na+(in).","definition_xrefs":["PMID:10619430","PMID:11742981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-asparagine transmembrane transporter activity","termid":"GO:0015182"},{"relation_name":"is_a","term_name":"sodium:proton antiporter activity","termid":"GO:0015385"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-asparagine, sodium:proton antiporter activity","secondary_identifiers":["RHEA:71131"],"termid":"GO:0140831"}


id: GO:1902680
data:
  {"annotated_genes":["SJAG_03143","SJAG_04388","SJAG_03519","SJAG_03241","SJAG_00987","SJAG_00698","SJAG_02608","SJAG_00163","SJAG_04099","SJAG_04191","SJAG_02709","SJAG_00792","SJAG_04839","SJAG_03484","SJAG_00909","SJAG_01694","SJAG_00266","SJAG_00822","SJAG_03622","SJAG_00766","SJAG_03067","SJAG_04421","SJAG_04813","SJAG_01113","SJAG_02415","SJAG_03538","SJAG_02592","SJAG_03346","SJAG_02810","SJAG_03118","SJAG_04551","SJAG_01150","SJAG_00297","SJAG_03735","SJAG_03289","SJAG_06576","SJAG_02773","SJAG_03421","SJAG_01243","SJAG_04206","SJAG_01213","SJAG_04647","SJAG_03590","SJAG_01151","SJAG_00973","SJAG_02326","SJAG_04749","SJAG_04249","SJAG_00156","SJAG_01771","SJAG_02406","SJAG_01740","SJAG_04009","SJAG_05341","SJAG_04820","SJAG_05203","SJAG_01778","SJAG_01199","SJAG_02551","SJAG_02057","SJAG_03897","SJAG_02938","SJAG_02048","SJAG_01583","SJAG_01193","SJAG_03183","SJAG_03061","SJAG_04705","SJAG_02138","SJAG_00164","SJAG_00802","SJAG_06638","SJAG_02311","SJAG_00269","SJAG_02391","SJAG_01307","SJAG_04036","SJAG_03981","SJAG_05313","SJAG_02254","SJAG_01764","SJAG_04855","SJAG_02196","SJAG_04755","SJAG_01952","SJAG_05288","SJAG_02472","SJAG_01916","SJAG_02218","SJAG_02474","SJAG_02956","SJAG_01938","SJAG_00693","SJAG_00641","SJAG_05247","SJAG_02849","SJAG_00210","SJAG_06599","SJAG_00150","SJAG_01149","SJAG_01062","SJAG_01403","SJAG_02671","SJAG_05153","SJAG_05343","SJAG_03126","SJAG_05187","SJAG_03501","SJAG_02255","SJAG_01805","SJAG_01878","SJAG_04611","SJAG_02494","SJAG_00904","SJAG_03967","SJAG_02723","SJAG_02730","SJAG_03879","SJAG_00342","SJAG_03573","SJAG_02252","SJAG_04712","SJAG_04092","SJAG_02698","SJAG_01441","SJAG_00613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70664,80107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032786"},{"annotations":[93822,88279,89787,107023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060963"},{"annotations":[90034,79906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[112343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"},{"annotations":[76400,78296,78875,79875,73532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045943"},{"annotations":[77790,63150,98907,119496,80104,75996,95419,69089,96023,108943,112127,109175,71163,76253,97852,75260,97257,79434,102487,78397,98747,111098,79833,74167,70757,115217,104789,94138,62200,119497,94040,61304,70661,74204,97855,95863,71759,109413,73315,100838,107939,108829,117379,65583,116665,67860,69833,112676,73787,87737,118634,66695,94706,100827,75190,71839,72858,78935,99627,76158,68968,107778,71208,102614,117764,80193,108338,72275,97853,97854,77107,77754,97856,99835,102567,103510,73772,97622,116856,93081,109002,110059,76577,103038,112257,63422,72502,69624,79948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045944"},{"annotations":[78414,71924,79917,106407,71381,117388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"},{"annotations":[96195,106735,119334,95715,106408,87774,94783,115118,115683,91005,99357,104016,106051,109090,90691,94668,106598,109117,99005,103757,102296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of RNA biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GO:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of RNA biosynthetic process","termid":"GO:2001141"},{"relation_name":"positively_regulates","term_name":"RNA biosynthetic process","termid":"GO:0032774"}],"gene_count":126,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00156":null,"SJAG_00163":null,"SJAG_00164":null,"SJAG_00210":null,"SJAG_00266":null,"SJAG_00269":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00613":null,"SJAG_00641":null,"SJAG_00693":null,"SJAG_00698":null,"SJAG_00766":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00822":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_00973":null,"SJAG_00987":null,"SJAG_01062":null,"SJAG_01113":null,"SJAG_01149":null,"SJAG_01150":null,"SJAG_01151":null,"SJAG_01193":null,"SJAG_01199":null,"SJAG_01213":null,"SJAG_01243":null,"SJAG_01307":null,"SJAG_01403":null,"SJAG_01441":null,"SJAG_01583":null,"SJAG_01694":null,"SJAG_01740":null,"SJAG_01764":null,"SJAG_01771":null,"SJAG_01778":null,"SJAG_01805":null,"SJAG_01878":null,"SJAG_01916":null,"SJAG_01938":null,"SJAG_01952":null,"SJAG_02048":null,"SJAG_02057":null,"SJAG_02138":null,"SJAG_02196":null,"SJAG_02218":null,"SJAG_02252":null,"SJAG_02254":null,"SJAG_02255":null,"SJAG_02311":null,"SJAG_02326":null,"SJAG_02391":null,"SJAG_02406":null,"SJAG_02415":null,"SJAG_02472":null,"SJAG_02474":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02592":null,"SJAG_02608":null,"SJAG_02671":null,"SJAG_02698":null,"SJAG_02709":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02810":null,"SJAG_02849":null,"SJAG_02938":null,"SJAG_02956":null,"SJAG_03061":null,"SJAG_03067":null,"SJAG_03118":null,"SJAG_03126":null,"SJAG_03143":null,"SJAG_03183":null,"SJAG_03241":null,"SJAG_03289":null,"SJAG_03346":null,"SJAG_03421":null,"SJAG_03484":null,"SJAG_03501":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_03735":null,"SJAG_03879":null,"SJAG_03897":null,"SJAG_03967":null,"SJAG_03981":null,"SJAG_04009":null,"SJAG_04036":null,"SJAG_04092":null,"SJAG_04099":null,"SJAG_04191":null,"SJAG_04206":null,"SJAG_04249":null,"SJAG_04388":null,"SJAG_04421":null,"SJAG_04551":null,"SJAG_04611":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04712":null,"SJAG_04749":null,"SJAG_04755":null,"SJAG_04813":null,"SJAG_04820":null,"SJAG_04839":null,"SJAG_04855":null,"SJAG_05153":null,"SJAG_05187":null,"SJAG_05203":null,"SJAG_05247":null,"SJAG_05288":null,"SJAG_05313":null,"SJAG_05341":null,"SJAG_05343":null,"SJAG_06576":null,"SJAG_06599":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of RNA biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of RNA anabolism","type":"narrow"},{"name":"activation of RNA biosynthesis","type":"narrow"},{"name":"activation of RNA biosynthetic process","type":"narrow"},{"name":"activation of RNA formation","type":"narrow"},{"name":"activation of RNA synthesis","type":"narrow"},{"name":"positive regulation of RNA anabolism","type":"exact"},{"name":"positive regulation of RNA biosynthesis","type":"exact"},{"name":"positive regulation of RNA formation","type":"exact"},{"name":"positive regulation of RNA synthesis","type":"exact"},{"name":"up regulation of RNA anabolism","type":"exact"},{"name":"up regulation of RNA biosynthesis","type":"exact"},{"name":"up regulation of RNA biosynthetic process","type":"exact"},{"name":"up regulation of RNA formation","type":"exact"},{"name":"up regulation of RNA synthesis","type":"exact"},{"name":"up-regulation of RNA anabolism","type":"exact"},{"name":"up-regulation of RNA biosynthesis","type":"exact"},{"name":"up-regulation of RNA biosynthetic process","type":"exact"},{"name":"up-regulation of RNA formation","type":"exact"},{"name":"up-regulation of RNA synthesis","type":"exact"},{"name":"upregulation of RNA anabolism","type":"exact"},{"name":"upregulation of RNA biosynthesis","type":"exact"},{"name":"upregulation of RNA biosynthetic process","type":"exact"},{"name":"upregulation of RNA formation","type":"exact"},{"name":"upregulation of RNA synthesis","type":"exact"}],"termid":"GO:1902680","terms_by_termid":{"GO:0032786":null,"GO:0032968":null,"GO:0045899":null,"GO:0045943":null,"GO:0045944":null,"GO:0060261":null,"GO:0060963":null,"GO:1904595":null}}


id: PBO:0049279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 to S phase transition 2","termid":"PBO:0049279"}


id: GO:0033322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-homomethionine, a non-protein amino acid synthesized from L-methionine via chain elongation.","definition_xrefs":["MetaCyc:PWY-1186","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homomethionine metabolic process","termid":"GO:0033321"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-homomethionine biosynthetic process","synonyms":[{"name":"homomethionine anabolism","type":"exact"},{"name":"homomethionine biosynthesis","type":"exact"},{"name":"homomethionine biosynthetic process","type":"exact"},{"name":"homomethionine formation","type":"exact"},{"name":"homomethionine synthesis","type":"exact"}],"termid":"GO:0033322"}


id: FYPO:0002844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells which are septated, elongated, and have a larger than normal cell volume. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, swollen elongated septated cells (obsolete FYPO:0002844)","synonyms":[{"name":"inviable microcolony, enlarged long septated vegetative cells","type":"related"},{"name":"inviable microcolony, large elongated septated vegetative cells","type":"related"},{"name":"inviable microcolony, swollen elongated septated vegetative cells","type":"exact"}],"termid":"FYPO:0002844"}


id: PR:P87112
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- not1 gene.","definition_xrefs":["UniProtKB:P87112","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general negative regulator of transcription subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.06","synonyms":[{"name":"Spom972h-not1","type":"exact"}],"termid":"PR:P87112"}


id: GO:0140815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidyl-[protein] + NAD+ = H+ + Nt-(ADP-D-ribosyl)-L-histidyl-[protein] + nicotinamide.","definition_xrefs":["RHEA:72071","PMID:35393539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein mono-ADP-ribosyltransferase activity","termid":"GO:1990404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"NAD+-protein-histidine ADP-ribosyltransferase activity","termid":"GO:0140815"}


id: PBO:0067994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 296","termid":"PBO:0067994"}


id: GO:0071586
data:
  {"annotated_genes":["SJAG_03396","SJAG_00730"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70525,75303],"is_not":false,"summary":null,"term":"GO:0071586"}]},"cv_name":"biological_process","definition":"The second process in a series of specific posttranslational modifications to the CAAX box region of CAAX box proteins, in which the last three amino acids of the protein (AAX) are removed by proteolysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"},{"relation_name":"part_of","term_name":"CAAX-box protein maturation","termid":"GO:0080120"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00730":null,"SJAG_03396":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"CAAX-box protein processing","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0071586","terms_by_termid":{"GO:0071586":null}}


id: FYPO:0002073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the nucleus is observed there during a cellular response to copper ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to nucleus during cellular response to copper ion","synonyms":[{"name":"ectopic protein localization to nucleus during cellular response to copper","type":"exact"},{"name":"nuclear protein accumulation in response to copper","type":"related"},{"name":"protein mislocalised to nucleus during cellular response to copper ion","type":"exact"},{"name":"protein mislocalised to nucleus during cellular response to copper ion during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleus during cellular response to copper","type":"exact"},{"name":"protein mislocalized to nucleus during cellular response to copper during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to nucleus during cellular response to copper ion during vegetative growth","type":"exact"}],"termid":"FYPO:0002073"}


id: PBO:0068145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 452","termid":"PBO:0068145"}


id: PBO:0034475
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_phosphatidylethanolamine_level","termid":"PBO:0034475"}


id: PBO:0066621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIC1 homolog, RAB6A GEF complex partner 1","termid":"PBO:0066621"}


id: GO:0052789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of (1->3)-beta-D-mannosidic linkages in mannans, releasing mannose.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete mannan 1,3-beta-mannosidase activity (obsolete GO:0052789)","termid":"GO:0052789"}


id: GO:0141029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts focal adhesion in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:19489119","PMID:24573681","PMID:24905543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical structure","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host focal adhesion","synonyms":[{"name":"disruption by symbiont of host focal adhesion","type":"exact"}],"termid":"GO:0141029"}


id: PBO:0039314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog 8, tRNA methyltransferase","termid":"PBO:0039314"}


id: GO:0007188
data:
  {"annotated_genes":["SJAG_02426","SJAG_02481","SJAG_01699","SJAG_01245","SJAG_02311","SJAG_04026","SJAG_02444","SJAG_01754","SJAG_04312","SJAG_00472","SJAG_00574","SJAG_01254","SJAG_03081","SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109889,94557,109381,102188,106263,107210,106860,115921,116952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010619"},{"annotations":[92416,100778,93080,116769,108334],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway in which the signal is transmitted via the activation or inhibition of adenylyl cyclase activity and a subsequent change in the intracellular concentration of cyclic AMP (cAMP).","definition_xrefs":["ISBN:0815316194","GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_01245":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02481":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-modulating G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G protein signaling, coupled to cAMP nucleotide second messenger","type":"exact"},{"name":"G protein signaling, coupled to cyclic AMP nucleotide second messenger","type":"exact"},{"name":"G protein signalling, coupled to cAMP nucleotide second messenger","type":"exact"},{"name":"G protein signalling, coupled to cyclic AMP nucleotide second messenger","type":"exact"},{"name":"G-protein signaling, coupled to cAMP nucleotide second messenger","type":"exact"},{"name":"G-protein signaling, coupled to cyclic AMP nucleotide second messenger","type":"exact"},{"name":"G-protein signalling, coupled to cAMP nucleotide second messenger","type":"exact"},{"name":"G-protein signalling, coupled to cyclic AMP nucleotide second messenger","type":"exact"},{"name":"GPCR signaling pathway via cAMP second messenger","type":"exact"},{"name":"GPCR signaling pathway via modulation of adenylate cyclase activity","type":"exact"},{"name":"adenylate cyclase-modulating GPCR signaling pathway","type":"exact"}],"termid":"GO:0007188","terms_by_termid":{"GO:0010619":null,"GO:0110034":null}}


id: MONDO:0800455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Birt-Hogg-Dube syndrome caused by the mutations in PRDM10.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Birt-Hogg-Dube syndrome","termid":"MONDO:0800444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Birt-Hogg-Dube syndrome 2","secondary_identifiers":["OMIM:620459","UMLS:C5830676","MEDGEN:1841312"],"synonyms":[{"name":"BHD2","type":"exact"}],"termid":"MONDO:0800455","xrefs":{"Monarch":{"xref_id":"0800455"}}}


id: MONDO:0016175
data:
  {"annotated_genes":["SJAG_00516","SJAG_00212","SJAG_01471","SJAG_00660","SJAG_03457","SJAG_02399","SJAG_00120"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87563,87562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[87410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018163"},{"annotations":[85499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013051"},{"annotations":[87145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027462"},{"annotations":[87144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027451"},{"annotations":[86329,86330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014706"},{"annotations":[87423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010572"},{"annotations":[86958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013755"},{"annotations":[85937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010208"}]},"cv_name":"mondo","definition":"Cutis laxa (CL) is an inherited or acquired connective tissue disorder characterized by wrinkled, redundant and sagging inelastic skin associated with skeletal and developmental anomalies and, in some cases, with severe systemic involvement. Several different forms of inherited CL have been described, differentiated on the basis of the mode of inheritance and differences in the extent of internal organ involvement, associated anomalies and disease severity.","definition_xrefs":["Orphanet:209"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic diaphragmatic or abdominal wall malformation (obsolete MONDO:0015216)","termid":"MONDO:0015216"},{"relation_name":"excluded_subClassOf","term_name":"congenital entropion","termid":"MONDO:0020159"},{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_00660":null,"SJAG_01471":null,"SJAG_02399":null,"SJAG_03457":null},"genotype_count":0,"is_obsolete":false,"name":"cutis laxa","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C84663","MedDRA:10011692","GARD:6227","SCTID:58588007","UMLS:C0010495","icd11.foundation:1227401566","MEDGEN:8206","DOID:3144","MESH:D003483","NORD:1022"],"synonyms":[{"name":"cutis laxa","type":"exact"},{"name":"elastolysis","type":"exact"},{"name":"generalised elastolysis","type":"related"},{"name":"generalized elastolysis","type":"related"},{"name":"loose skin","type":"exact"}],"termid":"MONDO:0016175","terms_by_termid":{"MONDO:0009053":null,"MONDO:0010208":null,"MONDO:0010572":null,"MONDO:0013051":null,"MONDO:0013755":null,"MONDO:0014706":null,"MONDO:0018163":null,"MONDO:0027451":null,"MONDO:0027462":null},"xrefs":{"Monarch":{"xref_id":"0016175"}}}


id: SO:0002175
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration_artifact","termid":"SO:0002172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_artifact","synonyms":[{"name":"insertion artifact","type":"exact"}],"termid":"SO:0002175"}


id: FYPO:0009012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which a lower than normal proportion of cells is viable when the medium contains galactose as carbon source. In High Throughput Phenotyping this is typically assessed using phloxine as a dye.","definition_xrefs":["PMID:34984977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population viability","termid":"FYPO:0009007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"decreased vegetative cell population viability on galactose carbon source","synonyms":[{"name":"decreased viability on galactose carbon source","type":"broad"}],"termid":"FYPO:0009012"}


id: PBO:0040433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 8A1","termid":"PBO:0040433"}


id: MONDO:0004593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distension of the Bartholin gland duct caused by an accumulation of mucus in the duct, usually as a result of obstruction of the gland duct orifice.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bartholin duct cyst","secondary_identifiers":["ICD9:616.2","ICD10CM:N75.0","MEDGEN:14032","SCTID:57044006","UMLS:C0004767","DOID:851"],"synonyms":[{"name":"Bartholin's cyst","type":"exact"},{"name":"Bartholin's duct cyst","type":"exact"},{"name":"cyst of Bartholin's gland","type":"exact"},{"name":"cyst of Bartholin's gland duct","type":"exact"}],"termid":"MONDO:0004593","xrefs":{"Monarch":{"xref_id":"0004593"}}}


id: MONDO:0012430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dysequilibrium syndrome in which the cause of the disease is a mutation in the WDR81 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, intellectual disability, and dysequilibrium","termid":"MONDO:0009133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome 2","secondary_identifiers":["DOID:0070557","GARD:15473","OMIM:610185","UMLS:C2750234","MESH:C567656","MEDGEN:412914"],"synonyms":[{"name":"CAMRQ2","type":"related"},{"name":"WDR81 dysequilibrium syndrome","type":"exact"},{"name":"cerebellar ataxia and intellectual disability with or without quadrupedal locomotion 2","type":"related"},{"name":"cerebellar ataxia and mental retardation with or without quadrupedal locomotion 2","type":"related"},{"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome 2","type":"exact"},{"name":"cerebellar ataxia, intellectual disability, and dysequilibrium syndrome type 2","type":"exact"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium syndrome 2","type":"exact"},{"name":"cerebellar ataxia, mental retardation, and dysequilibrium syndrome type 2","type":"exact"},{"name":"dysequilibrium syndrome caused by mutation in WDR81","type":"exact"}],"termid":"MONDO:0012430","xrefs":{"Monarch":{"xref_id":"0012430"}}}


id: GO:0097374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a sensory neuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A sensory neuron is an afferent neuron conveying sensory impulses.","definition_xrefs":["GOC:pr","CL:0000101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory neuron axon guidance","termid":"GO:0097374"}


id: MONDO:0035293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infection-related hemolytic uremic syndrome","termid":"MONDO:0034103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"streptococcus pneumoniae-associated hemolytic uremic syndrome","secondary_identifiers":["UMLS:C5680164","ICD10CM:D58.8","GARD:22235","MEDGEN:1842720","Orphanet:544493"],"synonyms":[{"name":"S. pneumoniae-associated HUS","type":"exact"},{"name":"SP-HUS","type":"exact"}],"termid":"MONDO:0035293","xrefs":{"Monarch":{"xref_id":"0035293"}}}


id: PBO:0051187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR15-7 (pseudogene)","termid":"PBO:0051187"}


id: GO:0098004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a virus tail fiber.","definition_xrefs":["GOC:bm","VZ:3956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral tail assembly","termid":"GO:0098003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"virus tail fiber assembly","termid":"GO:0098004"}


id: PR:P33886
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin light chain kinase 2, skeletal/cardiac muscle that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase wis1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.07c","secondary_identifiers":["UniProtKB:P33886"],"synonyms":[{"name":"SPBC409.07c","type":"related"},{"name":"Spom972h-MYLK2","type":"exact"},{"name":"protein kinase sty2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"spc2","type":"related"},{"name":"sty2","type":"related"}],"termid":"PR:P33886"}


id: PBO:0051529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 2 receptor subunit alpha","termid":"PBO:0051529"}


id: PBO:0002689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex subunit Arp2","termid":"PBO:0002689"}


id: MONDO:0000265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of lung inflammation resulting from the aspiration of food, liquid, or gastric contents into the upper respiratory tract.","definition_xrefs":["MESH:D011015"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pneumonia","termid":"MONDO:0005249"},{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspiration pneumonia","secondary_identifiers":["HP:0011951","SCTID:422588002","UMLS:C0032290","MEDGEN:10814","DOID:0050152"],"synonyms":[{"name":"Mendelson syndrome","type":"exact"},{"name":"Mendelson's syndrome","type":"exact"},{"name":"Mendelsons syndrome","type":"exact"},{"name":"Pneumonias, aspiration","type":"exact"},{"name":"acid aspiration syndrome","type":"exact"},{"name":"acid aspiration syndromes","type":"exact"},{"name":"aspiration Pneumonias","type":"exact"},{"name":"aspiration pneumonia","type":"exact"},{"name":"aspiration pneumonia (disease)","type":"exact"},{"name":"gastric acid aspiration syndrome","type":"exact"},{"name":"inhalation pneumonia","type":"related"},{"name":"syndrome, Mendelson","type":"exact"},{"name":"syndrome, Mendelson's","type":"exact"},{"name":"syndrome, acid aspiration","type":"exact"},{"name":"syndromes, acid aspiration","type":"exact"}],"termid":"MONDO:0000265","xrefs":{"Monarch":{"xref_id":"0000265"}}}


id: PBO:0000598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Mot2 (predicted)","termid":"PBO:0000598"}


id: PBO:0079057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 12-1","termid":"PBO:0079057"}


id: FYPO:0001845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which kinetochore organization is normal (i.e. indistinguishable from wild type). Kinetochore organization is the assembly, arrangement of constituent parts, or disassembly of kinetochores and their associated proteins.","definition_xrefs":["GO:0051383","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal kinetochore organization","synonyms":[{"name":"normal kinetochore organisation","type":"exact"},{"name":"normal kinetochore organization during mitotic cell cycle","type":"related"},{"name":"normal kinetochore organization during vegetative growth","type":"exact"}],"termid":"FYPO:0001845"}


id: PBO:0075320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1 pseudogene 2","termid":"PBO:0075320"}


id: MONDO:0020085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mastocytosis (obsolete MONDO:0020085)","termid":"MONDO:0020085","xrefs":{"Monarch":{"xref_id":"0020085"}}}


id: PBO:0044214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortactin","termid":"PBO:0044214"}


id: FYECO:0000067
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which lauric acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ lauric acid","termid":"FYECO:0000067"}


id: MONDO:0041186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of lupus erythematosus (discoid or systemic) with annular lesions of the skin like erythema multiforme associated with a characteristic pattern of immunological abnormalities.","definition_xrefs":["Wikipedia:Rowell%27s_syndrome","PMID:19891909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous lupus erythematosus","termid":"MONDO:0005282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Rowell syndrome","secondary_identifiers":["MEDGEN:590567","Orphanet:658584","SCTID:238926009","UMLS:C0406637"],"synonyms":[{"name":"Rowell's syndrome","type":"related"},{"name":"lupus erythematosus and erythema multiforme-like syndrome","type":"exact"}],"termid":"MONDO:0041186","xrefs":{"Monarch":{"xref_id":"0041186"}}}


id: PBO:0113141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-quadruplex (G4) DNA binding protein; maintains genome integrity by promoting the stability of G4-DNA regions; involved in nucleosome displacement during double-strand break repair; involved in fructose-1,6-bisphosphatase (FBPase) transport from the cytosol to Vid (vacuole import and degradation) vesicles during degradation; glycosylated integral membrane protein of the plasma membrane; localizes to the nucleus; contains a BED-type zinc finger domain and a RNase H-like domain","termid":"PBO:0113141"}


id: PBO:0026724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_histone_H2A_in_cell","termid":"PBO:0026724"}


id: GO:0044439
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a peroxisome, a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal part (obsolete GO:0044439)","synonyms":[{"name":"peroxisome component","type":"exact"}],"termid":"GO:0044439"}


id: PBO:0038365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_primary_substance_added","termid":"PBO:0038365"}


id: PBO:0065825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB5 interacting factor","termid":"PBO:0065825"}


id: PBO:0068144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 451","termid":"PBO:0068144"}


id: GO:1903557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tumor necrosis factor superfamily cytokine production.","definition_xrefs":["GOC:TermGenie","PMID:24187568","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"positively_regulates","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of tumor necrosis factor superfamily cytokine production","synonyms":[{"name":"activation of TNF superfamily production","type":"related"},{"name":"activation of TNFSF cytokine production","type":"narrow"},{"name":"activation of tumor necrosis factor superfamily cytokine production","type":"narrow"},{"name":"positive regulation of TNF superfamily production","type":"related"},{"name":"positive regulation of TNFSF cytokine production","type":"exact"},{"name":"up regulation of TNF superfamily production","type":"related"},{"name":"up regulation of TNFSF cytokine production","type":"exact"},{"name":"up regulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"up-regulation of TNF superfamily production","type":"related"},{"name":"up-regulation of TNFSF cytokine production","type":"exact"},{"name":"up-regulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"upregulation of TNF superfamily production","type":"related"},{"name":"upregulation of TNFSF cytokine production","type":"exact"},{"name":"upregulation of tumor necrosis factor superfamily cytokine production","type":"exact"}],"termid":"GO:1903557"}


id: SO:0001800
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of a 21 nucleotide double stranded, polyadenylated non coding RNA, transcribed from the TAS gene.","definition_xrefs":["PMID:16145017"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tasiRNA_primary_transcript","termid":"SO:0001801"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tasiRNA","synonyms":[{"name":"trans acting small interfering RNA","type":"related"}],"termid":"SO:0001800"}


id: MONDO:0019933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acromegaly is an acquired disorder related to excessive production of growth hormone (GH) and characterized by progressive somatic disfigurement (mainly involving the face and extremities) and systemic manifestations.","definition_xrefs":["Orphanet:963"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"growth hormone secreting pituitary adenoma 1","termid":"MONDO:0007052"},{"relation_name":"is_a","term_name":"hyperpituitarism","termid":"MONDO:0006793"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acromegaly","secondary_identifiers":["NANDO:2200315","DOID:2449","EFO:1001485","GARD:5725","MedDRA:10000599","NORD:723","MEDGEN:1304","UMLS:C0001206","MESH:D000172","NCIT:C84533","NANDO:2100112","SCTID:74107003"],"synonyms":[{"name":"Growth hormone excess","type":"related"},{"name":"pituitary giant","type":"related"},{"name":"somatotroph adenoma","type":"related"}],"termid":"MONDO:0019933","xrefs":{"Monarch":{"xref_id":"0019933"}}}


id: PBO:0069270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 526, pseudogene","termid":"PBO:0069270"}


id: MONDO:0002764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, moderately differentiated, or poorly differentiated squamous cell carcinoma that arises from the male or female urethra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"carcinoma of urethra","termid":"MONDO:0021327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"urethra squamous cell carcinoma","secondary_identifiers":["NCIT:C6165","UMLS:C1336890","ONCOTREE:USCC","DOID:3750","MEDGEN:234975"],"synonyms":[{"name":"USCC","type":"related"},{"name":"epidermoid carcinoma of the urethra","type":"exact"},{"name":"epidermoid carcinoma of urethra","type":"exact"},{"name":"squamous cell carcinoma of the urethra","type":"exact"},{"name":"squamous cell carcinoma of urethra","type":"exact"},{"name":"urethra epidermoid carcinoma","type":"exact"},{"name":"urethra squamous cell carcinoma","type":"exact"},{"name":"urethral epidermoid carcinoma","type":"exact"},{"name":"urethral squamous cell cancer","type":"exact"},{"name":"urethral squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0002764","xrefs":{"Monarch":{"xref_id":"0002764"}}}


id: PBO:0060804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S7","termid":"PBO:0060804"}


id: GO:0015424
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + amino acid(out/in) = ADP + phosphate + amino acid(in/out).","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type amino acid transporter activity","secondary_identifiers":["GO:0032518","GO:0032520"],"synonyms":[{"name":"ATP-dependent amino acid transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled amino acid transmembrane transporter activity","type":"related"},{"name":"amino acid ABC transporter","type":"narrow"},{"name":"amino acid-exporting ATPase activity","type":"related"},{"name":"amino acid-importing ATPase activity","type":"related"},{"name":"amino acid-transporting ATPase activity","type":"exact"}],"termid":"GO:0015424"}


id: PBO:0029001
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_histone_H3_at_dh_repeat","termid":"PBO:0029001"}


id: PBO:0034403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_target_sequence_feature_(obsolete_requires_target_sequence_feature)","termid":"PBO:0034403"}


id: RO:0003001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a produced_by b iff some process that occurs_in b has_output a.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"produced_by","termid":"RO:0003001"}


id: MONDO:0003983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carcinoma that is detected in one breast within two months from the diagnosis of carcinoma in the other breast.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral breast carcinoma","termid":"MONDO:0003982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"synchronous bilateral breast carcinoma","secondary_identifiers":["MEDGEN:271163","UMLS:C1515107","NCIT:C40370","DOID:6742"],"termid":"MONDO:0003983","xrefs":{"Monarch":{"xref_id":"0003983"}}}


id: PR:Q1RKN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tlh2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1RKN3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase tlh2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBCPT2R1.08c","synonyms":[{"name":"Spom972h-tlh2","type":"exact"},{"name":"Sub-telomeric helicase RecQ homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q1RKN3"}


id: GO:1901290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of succinyl-CoA.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinyl-CoA metabolic process","termid":"GO:0006104"},{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"succinyl-CoA biosynthetic process","secondary_identifiers":["Reactome:R-HSA-9853506"],"synonyms":[{"name":"succinyl-CoA anabolism","type":"exact"},{"name":"succinyl-CoA biosynthesis","type":"exact"},{"name":"succinyl-CoA formation","type":"exact"},{"name":"succinyl-CoA synthesis","type":"exact"}],"termid":"GO:1901290"}


id: PBO:0043576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type X alpha 1 chain","termid":"PBO:0043576"}


id: GO:0046436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-alanine, the D-enantiomer of the amino acid alanine, i.e. (2R)-2-aminopropanoic acid.","definition_xrefs":["GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"D-alanine metabolic process","synonyms":[{"name":"D-alanine metabolism","type":"exact"}],"termid":"GO:0046436"}


id: MONDO:0020681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, musculocontractural type","termid":"MONDO:0011142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005267","MONDO:0005066"],"is_obsolete":false,"name":"Ehlers-Danlos syndrome, musculocontractural type 1","secondary_identifiers":["DOID:0080736","NCIT:C168975","OMIM:601776"],"synonyms":[{"name":"Arthrogryposis, Distal, with peculiar facies and hydronephrosis","type":"related"},{"name":"Dundar syndrome","type":"related"},{"name":"EDSMC","type":"related"},{"name":"EDSMC1","type":"related"},{"name":"Ehlers-Danlos syndrome, musculocontractural type, 1","type":"related"},{"name":"Ehlers-Danlos syndrome, type Vib","type":"related"},{"name":"Ehlers-Danlos syndrome, type Vib, formerly","type":"related"},{"name":"adducted thumb, clubfoot, and Progressive Joint and skin laxity syndrome","type":"related"},{"name":"adducted thumb-clubfoot syndrome","type":"related"}],"termid":"MONDO:0020681","xrefs":{"Monarch":{"xref_id":"0020681"}}}


id: GO:0048179
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as an activin receptor. Heterodimeric activin receptors, comprising one Type I activin receptor and one Type II receptor polypeptide, and heterotrimeric receptors have been observed.","definition_xrefs":["PMID:8307945","PMID:8622651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"},{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"activin receptor complex","termid":"GO:0048179"}


id: PBO:0087109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein P2 beta; a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; free (non-ribosomal) P2 stimulates the phosphorylation of the eIF2 alpha subunit (Sui2p) by Gcn2p; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm","termid":"PBO:0087109"}


id: GO:0090539
data:
  {"annotated_genes":["SJAG_02602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107548],"is_not":false,"summary":null,"term":"GO:0090539"}]},"cv_name":"biological_process","definition":"The directed movement of a peptide pheromone across a membrane and out of a cell.","definition_xrefs":["GOC:tb","GOC:al","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide pheromone export","termid":"GO:0000770"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"peptide pheromone export by transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"peptide pheromone export by membrane transport","type":"exact"}],"termid":"GO:0090539","terms_by_termid":{"GO:0090539":null}}


id: PBO:0062558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 5","termid":"PBO:0062558"}


id: GO:0007566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Attachment of the blastocyst to the uterine lining.","definition_xrefs":["GOC:isa_complete","PMID:10882512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"},{"relation_name":"part_of","term_name":"female pregnancy","termid":"GO:0007565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo implantation","synonyms":[{"name":"blastocyst implantation","type":"exact"}],"termid":"GO:0007566"}


id: PBO:0003210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex Spc98/GCP3 subunit Alp6","termid":"PBO:0003210"}


id: PBO:0083478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene SUE1/YPR151C","termid":"PBO:0083478"}


id: MONDO:0022794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A structural cytogenetic abnormality characterized by partial or complete loss of chromosome 8.","definition_xrefs":["NCIT:C36535"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"monosomy","termid":"MONDO:0020639"}],"gene_count":0,"genotype_count":0,"name":"obsolete chromosome 8 deletion (obsolete MONDO:0022794)","secondary_identifiers":["MESH:C537823"],"synonyms":[{"name":"Anomaly of chromosome pair 8","type":"related"},{"name":"Deletions of chromosome 8","type":"related"},{"name":"del(8)","type":"related"},{"name":"loss of chromosome 8","type":"related"}],"termid":"MONDO:0022794","xrefs":{"Monarch":{"xref_id":"0022794"}}}


id: PBO:0116715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 39","termid":"PBO:0116715"}


id: PBO:0040846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 1","termid":"PBO:0040846"}


id: PBO:0089714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-dependent NAD(+) synthetase Qns1","termid":"PBO:0089714"}


id: PBO:0000608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2c homolog 3","termid":"PBO:0000608"}


id: PBO:0002858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human CCDC55 ortholog","termid":"PBO:0002858"}


id: MONDO:0011664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency due to CD25 deficiency","secondary_identifiers":["DOID:0111968","MEDGEN:377894","UMLS:C1853392","OMIM:606367","icd11.foundation:1705860123","MESH:C565232","NANDO:2200736","GARD:17049","Orphanet:169100"],"synonyms":[{"name":"CD25 deficiency","type":"related"},{"name":"IL2RA deficiency","type":"related"},{"name":"IMD41","type":"related"},{"name":"Interleukin 2 receptor, alpha, deficiency of","type":"related"},{"name":"Interleukin-2 receptor alpha chain deficiency","type":"exact"},{"name":"immunodeficiency 41 with lymphoproliferation and autoimmunity","type":"related"},{"name":"immunodeficiency due to CD25 deficiency","type":"exact"}],"termid":"MONDO:0011664","xrefs":{"Monarch":{"xref_id":"0011664"}}}


id: PBO:0076593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 14","termid":"PBO:0076593"}


id: PBO:0082574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin synthase II; catalyzes transfer of N-acetylglucosamine (GlcNAc) to chitin upon activation of zymogenic form; required for chitin synthesis in the primary septum during cytokinesis; localization regulated by Cdk1p during mitosis; phosphorylation by Dbf2p kinase regulates its dynamics and chitin synthesis during cytokinesis","termid":"PBO:0082574"}


id: PBO:0084834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein that interacts with mitochondrial RNA polymerase; interacts with an N-terminal region of mitochondrial RNA polymerase (Rpo41p) and couples RNA processing and translation to transcription","termid":"PBO:0084834"}


id: FYPO:0007249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the level of X-shaped DNA replication intermediates is normal (i.e. indistinguishable from wild type). X-shaped intermediates may be formed by replication forks moving bidirectionally from outside the region, or by the increased formation or persistence of Holliday junctions or similar recombination intermediates.","definition_xrefs":["PomBase:mah","PMID:23071723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal level of X-shaped replication intermediates","synonyms":[{"name":"normal level of X-shaped DNA replication intermediates","type":"exact"},{"name":"normal level of X-shaped replication intermediates during mitotic cell cycle","type":"related"},{"name":"normal level of X-shaped replication intermediates during vegetative growth","type":"exact"},{"name":"normal proportion of X-shaped replication intermediates","type":"related"}],"termid":"FYPO:0007249"}


id: PBO:0042433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 37 pseudogene 2","termid":"PBO:0042433"}


id: MONDO:1010731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any severe combined immunodeficiency disease in dogs in which the cause of the disease is a mutation in the IL2RG gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency disease, dog","termid":"MONDO:1011596"},{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked severe combined immunodeficiency disease, IL2RG-related, dog","secondary_identifiers":["OMIA:000899-9615"],"termid":"MONDO:1010731","xrefs":{"Monarch":{"xref_id":"1010731"}}}


id: MONDO:0006633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the gallbladder in the absence of gallstones.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholecystitis","termid":"MONDO:0002155"},{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"acalculous cholecystitis","secondary_identifiers":["SCTID:19968009","UMLS:C0267841","MedDRA:10000347","EFO:1000790","NCIT:C35578","DOID:2828","MESH:D042101","MEDGEN:82762"],"synonyms":[{"name":"acute acalculous cholecystitis","type":"narrow"},{"name":"acute cholecystitis without calculus","type":"exact"},{"name":"cholecystitis without calculus","type":"exact"}],"termid":"MONDO:0006633","xrefs":{"Monarch":{"xref_id":"0006633"}}}


id: GO:1900752
data:
  {"annotated_genes":["SJAG_01406","SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098715"},{"annotations":[65050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901553"}]},"cv_name":"biological_process","definition":"The directed movement of a malonic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:9573154","GOC:TermGenie","PMID:9128730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00671":null,"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"malonic acid transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"C3H4O4 transport","type":"related"},{"name":"H2malo transport","type":"related"},{"name":"HOOC-CH2-COOH transport","type":"related"},{"name":"propanedioic acid transport","type":"exact"}],"termid":"GO:1900752","terms_by_termid":{"GO:0098715":null,"GO:1901553":null}}


id: MONDO:0021183
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"deltaretrovirus infections","termid":"MONDO:0021184"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTLV-2 infection","secondary_identifiers":["UMLS:C0020102","SCTID:425740005","MESH:D015491","EFO:1001349","MEDGEN:42515"],"synonyms":[{"name":"HTLV II INFECT","type":"related"},{"name":"HTLV-2 infection","type":"exact"},{"name":"HTLV-II Infection","type":"related"},{"name":"HTLV-II Infections","type":"related"},{"name":"HTLV-II infection","type":"related"},{"name":"Human T lymphotropic Virus 2 Infection","type":"related"},{"name":"Human T lymphotropic Virus 2 Infections","type":"related"},{"name":"Human T-lymphotropic Virus 2 Infection","type":"related"},{"name":"Human T-lymphotropic Virus 2 Infections","type":"related"},{"name":"Human T-lymphotropic virus 2 infection","type":"related"},{"name":"INFECT HTLV II","type":"related"},{"name":"Infection, HTLV-II","type":"related"},{"name":"Infections, HTLV II","type":"related"},{"name":"Infections, HTLV-II","type":"related"}],"termid":"MONDO:0021183","xrefs":{"Monarch":{"xref_id":"0021183"}}}


id: PBO:0057687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1276","termid":"PBO:0057687"}


id: GO:0052027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts a signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host signal transduction pathway","secondary_identifiers":["GO:0052250"],"synonyms":[{"name":"modulation by symbiont of host signal transduction","type":"related"},{"name":"modulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"modulation of host signal transduction by symbiont","type":"exact"},{"name":"modulation of signal transduction in other organism involved in symbiotic interaction","type":"broad"},{"name":"perturbation of host signal transduction pathway","type":"exact"},{"name":"regulation by symbiont of host signal transduction pathway","type":"exact"}],"termid":"GO:0052027"}


id: PBO:0059412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S35 pseudogene 2","termid":"PBO:0059412"}


id: PBO:0072802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"senescence associated long non-coding RNA 1","termid":"PBO:0072802"}


id: GO:0075247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a dikaryotic spore of typically a rust fungus is produced in an aecium; in heteroecious rusts, the aeciospore is a spore stage that infects the alternate host.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aeciospore formation","termid":"GO:0075247"}


id: GO:0090353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of polygalacturonase.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0004857","GO:0140678","GO:0030234"],"is_obsolete":false,"name":"polygalacturonase inhibitor activity","termid":"GO:0090353"}


id: GO:0061552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of ganglion are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"ganglion development","termid":"GO:0061548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ganglion morphogenesis","synonyms":[{"name":"ganglia morphogenesis","type":"related"}],"termid":"GO:0061552"}


id: MONDO:0007763
data:
  {"annotated_genes":["SJAG_03787","SJAG_00440","SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87109,87110,87111],"is_not":false,"summary":null,"term":"MONDO:0007763"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00440":null,"SJAG_02231":null,"SJAG_03787":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"nonpapillary renal cell carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050387","OMIM:144700"],"synonyms":[{"name":"CCRCC","type":"narrow"},{"name":"RCC","type":"related"},{"name":"adenocarcinoma of kidney","type":"related"},{"name":"clear cell renal cell adenocarcinoma","type":"narrow"},{"name":"clear cell renal cell carcinoma","type":"narrow"},{"name":"hypernephroma","type":"related"},{"name":"nonpapillary renal carcinoma 1 locus","type":"related"},{"name":"renal carcinoma, chromophobe, somatic","type":"exact"},{"name":"renal cell carcinoma","type":"broad"},{"name":"renal cell carcinoma, clear cell","type":"exact"},{"name":"renal cell carcinoma, clear cell, somatic","type":"exact"},{"name":"renal cell carcinoma, nonpapillary","type":"related"},{"name":"renal cell carcinoma, somatic","type":"exact"}],"termid":"MONDO:0007763","terms_by_termid":{"MONDO:0007763":null},"xrefs":{"Monarch":{"xref_id":"0007763"}}}


id: PR:P36614
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein phosphatase 6 catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04922","PANTHER:PTHR11668:SF24","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase ppe1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.12","secondary_identifiers":["UniProtKB:P36614"],"synonyms":[{"name":"Spom972h-PPP6C","type":"exact"},{"name":"phosphatase esp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36614"}


id: GO:0098564
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the membrane of a trans-Golgi network transport vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi lumen","termid":"GO:0005796"},{"relation_name":"is_a","term_name":"transport vesicle lumen","termid":"GO:0098566"},{"relation_name":"part_of","term_name":"trans-Golgi network transport vesicle","termid":"GO:0030140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0031410","GO:0005794","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"trans-Golgi network transport vesicle lumen","termid":"GO:0098564"}


id: PBO:0119631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIK1 antisense RNA 3","termid":"PBO:0119631"}


id: MONDO:0012066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrial fibrillation","termid":"MONDO:0018054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial fibrillation, familial, 1","secondary_identifiers":["MESH:C538261","MEDGEN:334469","UMLS:C1843687","OMIM:608583"],"synonyms":[{"name":"ATFB1","type":"exact"},{"name":"atrial fibrillation, autosomal dominant","type":"broad"},{"name":"atrial fibrillation, familial, 1","type":"exact"}],"termid":"MONDO:0012066","xrefs":{"Monarch":{"xref_id":"0012066"}}}


id: PBO:0005027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Srp72 (predicted)","termid":"PBO:0005027"}


id: MONDO:0001489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete urticaria pigmentosa (obsolete MONDO:0001489)","termid":"MONDO:0001489","xrefs":{"Monarch":{"xref_id":"0001489"}}}


id: FYPO:0007559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing diethylstilbestrol.","definition_xrefs":["PMID:33223513","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0002057","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on diethylstilbestrol","synonyms":[{"name":"normal cell population growth in presence of diethylstilbestrol","type":"exact"},{"name":"normal cell population growth on DES","type":"exact"},{"name":"normal cell population growth on diethylstilbestrol","type":"exact"},{"name":"normal cellular response to diethylstilbestrol","type":"related"},{"name":"normal vegetative cell population growth on diethylstilbestrol","type":"exact"}],"termid":"FYPO:0007559"}


id: PBO:0056909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC inducible lncRNA inactivating p53","termid":"PBO:0056909"}


id: PBO:0088570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO activating enzyme E1-type Uba2","termid":"PBO:0088570"}


id: GO:0070078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the removal of a methyl group from arginine at position 2 of the histone.","definition_xrefs":["GOC:vk","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-R2 demethylation (obsolete GO:0070078)","termid":"GO:0070078"}


id: PBO:0030258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_complex_localization","termid":"PBO:0030258"}


id: PBO:0041311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 50","termid":"PBO:0041311"}


id: PBO:0042365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD163 molecule like 1","termid":"PBO:0042365"}


id: GO:0071127
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to osteopontin.","definition_xrefs":["PMID:16005200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha9-beta1 integrin-osteopontin complex","synonyms":[{"name":"ITGA9-ITGB1-SPP1 complex","type":"narrow"}],"termid":"GO:0071127"}


id: MOD:01972
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to 5-glutamyl coenzyme A thioester.","definition_xrefs":["PubMed:20977214","PubMed:16253988","PubMed:7915164","RESID:AA0614"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl coenzyme A thioester","synonyms":[{"name":"(2S)-2-amino-5-(2-[([3-([(2R)-2-hydroxy-3,3-dimethyl-4-([3'-phospho-adenosyl-5'-diphosphoryl]-oxy)-butanoyl]-amino)-propanoyl]-amino)-ethyl]-sulfanyl)-5-oxopentanoic acid","type":"exact"},{"name":"(2S)-2-amino-5-([2-(3-[(2R)-2-hydroxy-3,3-dimethyl-4-([3'-phospho-adenosyl-5'-diphosphoryl]-oxy)-butanamido]-propanamido)-ethyl]-sulfanyl)-5-oxopentanoic acid","type":"exact"},{"name":"5-glutamyl 4-[(3'-phospho-adenosyl-5'-diphosphoryl)oxy]pantetheine thioester","type":"exact"},{"name":"5-glutamyl coenzyme A thioester","type":"exact"},{"name":"5-glutamyl coenzyme A thioester intermediate","type":"exact"}],"termid":"MOD:01972"}


id: MONDO:0009703
data:
  {"annotated_genes":["SJAG_01937"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85396],"is_not":false,"summary":null,"term":"MONDO:0009703"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01937":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy with abnormal lipid metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C562935","MEDGEN:934789","OMIM:255100","SCTID:240095001","UMLS:C4310822"],"synonyms":[{"name":"LIPID storage myopathy due to flavin adenine dinucleotide synthetase deficiency","type":"related"},{"name":"LSMFLAD","type":"related"},{"name":"lipid storage myopathy","type":"related"},{"name":"lipid storage myopathy due to flavin adenine dinucleotide synthetase deficiency","type":"related"},{"name":"myopathy with abnormal lipid metabolism","type":"exact"}],"termid":"MONDO:0009703","terms_by_termid":{"MONDO:0009703":null},"xrefs":{"Monarch":{"xref_id":"0009703"}}}


id: PBO:0091171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane integral protein involved in protein targeting to mitochondrion","termid":"PBO:0091171"}


id: PBO:0084988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP(+)-dependent serine dehydrogenase and carbonyl reductase; acts on serine, L-allo-threonine, and other 3-hydroxy acids; green fluorescent protein fusion protein localizes to the cytoplasm and nucleus; may interact with ribosomes, based on co-purification experiments","termid":"PBO:0084988"}


id: PBO:0028429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pyridoxine_import","termid":"PBO:0028429"}


id: PBO:0069851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1137, pseudogene","termid":"PBO:0069851"}


id: PBO:0084585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCR058C was originally annotated as an independent ORF, but as a result of sequence changes, it was merged with two other ORFs into a single reading frame, designated YCR057C","termid":"PBO:0084585"}


id: PBO:0057177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 329-1","termid":"PBO:0057177"}


id: PBO:0050859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ICMT divergent transcript","termid":"PBO:0050859"}


id: MONDO:0005898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic infection of the soft tissues around the nail. Symptoms include pain, tenderness, erythema, and swelling around the nail. Acute infection results from minor trauma to the fingertip and Staphylococcus aureus is usually the causative agent. Chronic infection is usually caused by Candida albicans.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nail disorder","termid":"MONDO:0002884"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"paronychia","secondary_identifiers":["HP:0001818","SCTID:71906005","MEDGEN:45334","NCIT:C79702","EFO:0007421","UMLS:C0030578","ICD9:681.9","MESH:D010304","DOID:13117"],"synonyms":[{"name":"fungal nail infection","type":"exact"},{"name":"infected nailfold","type":"exact"},{"name":"onychia and paronychia of finger","type":"exact"},{"name":"onychia and paronychia of toe","type":"exact"},{"name":"paronychia","type":"exact"},{"name":"paronychia (disease)","type":"exact"},{"name":"paronychia inflammation","type":"related"}],"termid":"MONDO:0005898","xrefs":{"Monarch":{"xref_id":"0005898"}}}


id: GO:0043550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipid kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a simple or complex lipid.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kinase activity","termid":"GO:0043549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipid kinase activity","termid":"GO:0043550"}


id: PBO:0038282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogrid_interactor_id","termid":"PBO:0038282"}


id: GO:2000459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of astrocyte chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"negative regulation of glial cell migration","termid":"GO:1903976"},{"relation_name":"is_a","term_name":"regulation of astrocyte chemotaxis","termid":"GO:2000458"},{"relation_name":"negatively_regulates","term_name":"astrocyte chemotaxis","termid":"GO:0035700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of astrocyte chemotaxis","termid":"GO:2000459"}


id: GO:0048371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a lateral mesoderm cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell differentiation","termid":"GO:0048333"},{"relation_name":"part_of","term_name":"lateral mesoderm formation","termid":"GO:0048370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral mesodermal cell differentiation","synonyms":[{"name":"lateral mesoderm cell differentiation","type":"exact"},{"name":"lateral plate mesoderm cell differentiation","type":"exact"},{"name":"lateral plate mesodermal cell differentiation","type":"exact"}],"termid":"GO:0048371"}


id: MONDO:0013879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 2","secondary_identifiers":["OMIM:614743","UMLS:C3553622","MEDGEN:766536"],"synonyms":[{"name":"PFBMFT2","type":"related"},{"name":"aplastic anaemia","type":"broad"},{"name":"aplastic anemia","type":"broad"},{"name":"pulmonary fibrosis and/or bone marrow failure, TELOMERE-RELATED, 2","type":"related"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 2","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, type 2","type":"exact"},{"name":"pulmonary fibrosis, idiopathic, susceptibility to","type":"related"}],"termid":"MONDO:0013879","xrefs":{"Monarch":{"xref_id":"0013879"}}}


id: GO:0060152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The microtubule-based process in which a peroxisome is transported to, and/or maintained in, a specific location. A peroxisome is a small membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules.","definition_xrefs":["PMID:16449325","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-based process","termid":"GO:0007017"},{"relation_name":"is_a","term_name":"peroxisome localization","termid":"GO:0060151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"microtubule-based peroxisome localization","synonyms":[{"name":"microtubule-based peroxisome localisation","type":"exact"}],"termid":"GO:0060152"}


id: GO:1900617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of emericellamide A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"emericellamide biosynthetic process","termid":"GO:1900557"},{"relation_name":"is_a","term_name":"emericellamide A metabolic process","termid":"GO:1900615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"emericellamide A biosynthetic process","synonyms":[{"name":"emericellamide A anabolism","type":"exact"},{"name":"emericellamide A biosynthesis","type":"exact"},{"name":"emericellamide A formation","type":"exact"},{"name":"emericellamide A synthesis","type":"exact"}],"termid":"GO:1900617"}


id: GO:0102187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4alpha-carboxy,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol + NAD(1-) = 4alpha,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3-one + NADH(2-) + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 4alpha-carboxy,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol dehydrogenase/C4-decarboxylase activity (obsolete GO:0102187)","termid":"GO:0102187"}


id: PBO:0048530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 6","termid":"PBO:0048530"}


id: GO:2000552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 2 cell cytokine production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell cytokine production","termid":"GO:0002725"},{"relation_name":"is_a","term_name":"negative regulation of type 2 immune response","termid":"GO:0002829"},{"relation_name":"is_a","term_name":"regulation of T-helper 2 cell cytokine production","termid":"GO:2000551"},{"relation_name":"negatively_regulates","term_name":"T-helper 2 cell cytokine production","termid":"GO:0035745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of T-helper 2 cell cytokine production","synonyms":[{"name":"negative regulation of Th2 cell cytokine production","type":"exact"}],"termid":"GO:2000552"}


id: PBO:0056161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macroH2A.2 histone","termid":"PBO:0056161"}


id: PBO:0079620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L5","termid":"PBO:0079620"}


id: SO:0000685
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA region representing open chromatin structure that is hypersensitive to digestion by DNase I.","direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease_hypersensitive_site","termid":"SO:0000322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNaseI_hypersensitive_site","synonyms":[{"name":"DHS","type":"exact"},{"name":"DNaseI hypersensitive site","type":"exact"},{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:DNase_I_hypersensitive_site","type":"exact"}],"termid":"SO:0000685"}


id: GO:1990064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the patterning of the ground tissue.","definition_xrefs":["PMID:23444357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ground tissue pattern formation","synonyms":[{"name":"ground tissue patterning","type":"exact"}],"termid":"GO:1990064"}


id: MONDO:0013236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial pancreatic carcinoma in which the cause of the disease is a mutation in the PALB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial pancreatic carcinoma","termid":"MONDO:0015278"},{"relation_name":"is_a","term_name":"PALB2-related cancer predisposition","termid":"MONDO:0700272"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic cancer, susceptibility to, 3","secondary_identifiers":["OMIM:613348","UMLS:C3150547","MEDGEN:461897"],"synonyms":[{"name":"PALB2 familial pancreatic carcinoma","type":"exact"},{"name":"Pnca3","type":"related"},{"name":"familial pancreatic carcinoma caused by mutation in PALB2","type":"exact"},{"name":"pancreatic cancer, susceptibility to, 3","type":"exact"},{"name":"pancreatic cancer, susceptibility to, type 3","type":"exact"},{"name":"susceptibility to pancreatic cancer 3","type":"related"}],"termid":"MONDO:0013236","xrefs":{"Monarch":{"xref_id":"0013236"}}}


id: FYECO:0000048
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which petroselinic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ petroselinic acid","termid":"FYECO:0000048"}


id: PBO:0000259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD-dependent oxidoreductase (predicted)","termid":"PBO:0000259"}


id: FYPO:0007072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through anaphase B of mitosis is shorter than normal. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["GO:0000092","PMID:31427431","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of cell cycle phase","termid":"FYPO:0000410"},{"relation_name":"is_a","term_name":"abnormal mitotic anaphase progression","termid":"FYPO:0000616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased duration of mitotic anaphase B","synonyms":[{"name":"decreased duration of anaphase B during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic anaphase B during vegetative growth","type":"exact"},{"name":"decreased duration of mitotic anaphase B progression","type":"exact"},{"name":"reduced duration of mitotic anaphase B","type":"exact"}],"termid":"FYPO:0007072"}


id: PR:Q9USW5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps402 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USW5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S4-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.10","synonyms":[{"name":"Spom972h-rps402","type":"exact"}],"termid":"PR:Q9USW5"}


id: PBO:0083047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deoxyuridine triphosphate diphosphatase (dUTPase); catalyzes hydrolysis of dUTP to dUMP and PPi, thereby preventing incorporation of uracil into DNA during replication; critical for the maintenance of genetic stability; also has diphosphatase activity on deoxyinosine triphosphate; human homolog DUT allows growth of yeast haploid dut1 null mutant after sporulation of heterozygous diploid","termid":"PBO:0083047"}


id: MONDO:0014553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tenorio syndrome","secondary_identifiers":["UMLS:C4015710","MEDGEN:864147","OMIM:616260"],"synonyms":[{"name":"TENORIO syndrome","type":"related"},{"name":"TNORS","type":"related"},{"name":"Tenorio syndrome","type":"exact"},{"name":"overgrowth, macrocephaly, and intellectual disability syndrome","type":"related"}],"termid":"MONDO:0014553","xrefs":{"Monarch":{"xref_id":"0014553"}}}


id: PBO:0043895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich protein 1 pseudogene 2","termid":"PBO:0043895"}


id: GO:0000299
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes.","definition_xrefs":["PMID:10512869"],"gene_count":0,"genotype_count":0,"name":"obsolete integral to membrane of membrane fraction (obsolete GO:0000299)","synonyms":[{"name":"integral to membrane of membrane fraction","type":"exact"}],"termid":"GO:0000299"}


id: GO:0048708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an astrocyte. An astrocyte is the most abundant type of glial cell. Astrocytes provide support for neurons and regulate the environment in which they function.","definition_xrefs":["PMID:15139015","GOC:vp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"astrocyte differentiation","termid":"GO:0048708"}


id: PBO:0058317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4690","termid":"PBO:0058317"}


id: PBO:0040516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axonemal dynein light chain domain containing 1","termid":"PBO:0040516"}


id: PBO:0067922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 224","termid":"PBO:0067922"}


id: MONDO:0008965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CHARGE syndrome is a multiple congenital anomaly syndrome characterized by the variable combination of multiple anomalies, mainly Coloboma; Choanal atresia/stenosis; Cranial nerve dysfunction; Characteristic ear anomalies (known as the major 4 C's).","definition_xrefs":["Orphanet:138"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lens shape anomaly (obsolete MONDO:0020237)","termid":"MONDO:0020237"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"CHARGE syndrome","secondary_identifiers":["OMIM:214800","UMLS:C0265354","MESH:D058747","GARD:29","icd11.foundation:52086532","MEDGEN:75567","NANDO:1200464","MedDRA:10064063","ICD9:759.89","NANDO:2200972","DOID:0050834","SCTID:47535005","NCIT:C75100"],"synonyms":[{"name":"CHARGE association","type":"exact"},{"name":"CHARGE syndrome","type":"exact"},{"name":"Charge association--coloboma, heart anomaly, choanal atresia, retardation, genital and Ear anomalies","type":"related"},{"name":"Hall-Hittner syndrome","type":"exact"},{"name":"coloboma, heart anomaly, choanal atresia, retardation, genital and ear anomalies","type":"related"},{"name":"coloboma, heart defects, choanal atresia, retardation of Growth and development, genital abnormalities, and Ear anomalies association","type":"exact"},{"name":"coloboma, heart malformation, choanal atresia, retardation of Growth and development, genital abnormalities, and Ear malformations (CHARGE) association","type":"exact"},{"name":"coloboma-heart defects-atresia choanae-retardation of growth and development-genitourinary problems-ear abnormalities syndrome","type":"exact"}],"termid":"MONDO:0008965","xrefs":{"Monarch":{"xref_id":"0008965"}}}


id: PBO:0004192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBF transcription factor complex subunit Cdc10","termid":"PBO:0004192"}


id: PBO:0061868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory marker protein","termid":"PBO:0061868"}


id: PBO:0070788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 18","termid":"PBO:0070788"}


id: MOD:00218
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and the 5'-end of RNA through a phosphodiester to form O4'-(phospho-5'-RNA)-L-serine.","definition_xrefs":["PubMed:1705009","RESID:AA0213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleic acid linked residue","termid":"MOD:00751"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phospho-5'-RNA)-L-serine","synonyms":[{"name":"(S)-2-amino-3-(5'-ribonucleic acid phosphonoxy)propanoic acid","type":"exact"},{"name":"MOD_RES O-(5'-phospho-RNA)-serine","type":"exact"},{"name":"O-(phospho-5'-RNA)-L-serine","type":"exact"},{"name":"O3-(phospho-5'-RNA)-L-serine","type":"exact"},{"name":"O3-L-serine 5'-RNA phosphodiester","type":"exact"}],"termid":"MOD:00218"}


id: GO:0047707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + biotin + CoA = AMP + diphosphate + biotinyl-CoA.","definition_xrefs":["MetaCyc:BIOTIN--COA-LIGASE-RXN","EC:6.2.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"biotin-CoA ligase activity","secondary_identifiers":["RHEA:19681"],"synonyms":[{"name":"biotin CoA synthetase activity","type":"related"},{"name":"biotin:CoA ligase (AMP-forming)","type":"related"},{"name":"biotinyl coenzyme A synthetase activity","type":"related"},{"name":"biotinyl-CoA synthetase activity","type":"related"}],"termid":"GO:0047707"}


id: PBO:0075999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STING1 ER exit protein 1","termid":"PBO:0075999"}


id: PBO:0030660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Man9GlcNAc_level","termid":"PBO:0030660"}


id: PBO:0089745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Mpp10","termid":"PBO:0089745"}


id: GO:0062097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular metabolic process in which organic chemical compounds are synthesized from carbon-containing molecules and nutrients using energy obtained from the oxidation of inorganic compounds or methane.","definition_xrefs":["PMID:25050523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemosynthesis","secondary_identifiers":["Wikipedia:Chemosynthesis"],"termid":"GO:0062097"}


id: MONDO:0021355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the esophagus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"},{"relation_name":"is_a","term_name":"neoplasm of thorax","termid":"MONDO:0021350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"neoplasm of esophagus","secondary_identifiers":["NCIT:C3028","UMLS:C0014859","SCTID:126817006","MEDGEN:4547"],"synonyms":[{"name":"esophageal neoplasm","type":"exact"},{"name":"esophageal neoplasms, benign and malignant","type":"exact"},{"name":"esophageal tumor","type":"exact"},{"name":"esophageal tumors","type":"exact"},{"name":"esophageal tumour","type":"exact"},{"name":"esophageal tumours","type":"exact"},{"name":"esophagus neoplasm","type":"exact"},{"name":"esophagus neoplasm (disease)","type":"exact"},{"name":"esophagus tumor","type":"exact"},{"name":"neoplasm of esophagus","type":"exact"},{"name":"neoplasm of the esophagus","type":"exact"},{"name":"neoplasm of the oesophagus","type":"exact"},{"name":"oesophagus neoplasm","type":"exact"},{"name":"oesophagus neoplasm (disease)","type":"exact"},{"name":"oesophagus tumour","type":"exact"},{"name":"tumor of esophagus","type":"exact"},{"name":"tumor of the esophagus","type":"exact"},{"name":"tumour of oesophagus","type":"exact"},{"name":"tumour of the oesophagus","type":"exact"}],"termid":"MONDO:0021355","xrefs":{"Monarch":{"xref_id":"0021355"}}}


id: MONDO:0850088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary hypomagnesemia","termid":"MONDO:0018100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"EGF-related primary hypomagnesemia with intellectual disability","secondary_identifiers":["UMLS:C5681825","MEDGEN:1843381","Orphanet:620368","GARD:22485"],"termid":"MONDO:0850088","xrefs":{"Monarch":{"xref_id":"0850088"}}}


id: PATO:0001233
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the back or upper surface of an organism relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal to","synonyms":[{"name":"dorsal","type":"exact"},{"name":"posterior_to (human torso)","type":"exact"},{"name":"superior_to (human head)","type":"exact"}],"termid":"PATO:0001233"}


id: GO:0019923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent linking of the alpha-1-microglobulin chromophore to the protein; the structure of the chromophore is not known. It is probably heterogeneous and involving two cysteines in thioether bonds.","definition_xrefs":["RESID:AA0224"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-1-microglobulin-chromophore linkage (obsolete GO:0019923)","termid":"GO:0019923"}


id: PBO:0057641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1233-1","termid":"PBO:0057641"}


id: MONDO:0010154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trigonocephaly-bifid nose-acral anomalies syndrome is characterized by trigonocephaly, brachycephaly, bulbous nose (bifid at the tip), micrognathia, macrostomia, hypotonia and relatively broad metatarsals and phalanges.","definition_xrefs":["Orphanet:3368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigonocephaly-bifid nose-acral anomalies syndrome","secondary_identifiers":["MESH:C564759","GARD:5126","MEDGEN:341296","OMIM:275595","UMLS:C1848743"],"synonyms":[{"name":"trigonobrachycephaly, bulbous bifid nose, macrostomia, micrognathia, acral anomalies, and hypotonia","type":"related"},{"name":"trigonobrachycephaly, bulbous bifid nose, micrognathia, and abnormalities of the hands and feet","type":"related"},{"name":"trigonocephaly - bifid nose - acral anomalies","type":"related"}],"termid":"MONDO:0010154","xrefs":{"Monarch":{"xref_id":"0010154"}}}


id: MONDO:0018541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aldosterone synthase deficiency is a rare inherited defect of the final step of aldosterone biosynthesis (conversion of deoxycorticosterone to aldosterone).","definition_xrefs":["Orphanet:427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoaldosteronism disease","termid":"MONDO:0015900"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial hypoaldosteronism","secondary_identifiers":["icd11.foundation:712299654","GARD:16532","UMLS:C4275180","MEDGEN:899592","SCTID:715343000"],"termid":"MONDO:0018541","xrefs":{"Monarch":{"xref_id":"0018541"}}}


id: PATO:0001191
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the middle relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medial to","termid":"PATO:0001191"}


id: PBO:0087224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Secondary mitochondrial inner membrane glycine transporter; required with HEM25 for the transport of glycine into mitochondria for the initiation of heme biosynthesis; proposed role in oleate metabolism and glutamate biosynthesis; member of the mitochondrial carrier (MCF) family; localizes to the vacuole in response to H2O2; YMC1 has a paralog, YMC2, that arose from the whole genome duplication","termid":"PBO:0087224"}


id: PBO:0049127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor class C group 5 member D","termid":"PBO:0049127"}


id: MONDO:0018223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Systemic Epstein-Barr virus (EBV)-positive T-cell lymphoproliferative disease of childhood is a rare and very aggressive neoplastic disease emerging after a primary acute or chronic active EBV infection. It presents with persisting fever and malaise, hepatosplenomegaly with or without lymphadenopathy, liver failure, severe pancytopenia and a rapid progression towards multi-organ failure and hemophagocytic syndrome with a fatal issue. It is characterized by clonal proliferation of EBV-infected T cells with an activated cytotoxic phenotype.","definition_xrefs":["Orphanet:364033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature T-cell and NK-cell non-Hodgkin lymphoma","termid":"MONDO:0000430"},{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"pediatric lymphoma","termid":"MONDO:0003659"},{"relation_name":"is_a","term_name":"EBV-positive T-cell lymphoproliferative disorder of childhood","termid":"MONDO:0006188"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated malignant lymphoproliferative disorder","termid":"MONDO:0017343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"systemic Epstein-Barr virus-positive T-cell lymphoproliferative disease of childhood","secondary_identifiers":["SCTID:721311006","UMLS:C2699747","GARD:21562","DOID:0070324","ICDO:9724/3","MEDGEN:397492","NCIT:C80374"],"synonyms":[{"name":"EBV-positive T-cell lymphoproliferative disorder of childhood","type":"broad"},{"name":"systemic EBV+ T-cell LPD of childhood","type":"exact"},{"name":"systemic EBV-positive T-cell lymphoma of childhood","type":"exact"},{"name":"systemic EBV-positive T-cell lymphoproliferative disease of childhood","type":"exact"},{"name":"systemic EBV-positive T-cell lymphoproliferative disorder of childhood","type":"exact"}],"termid":"MONDO:0018223","xrefs":{"Monarch":{"xref_id":"0018223"}}}


id: MONDO:0012035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniosynostosis-intracranial calcification is a form of syndromic craniosynostosis, characterized by pancraniosynostosis, head circumference below the mid-parental head circumference, mild facial dysmorphism (prominent supraorbital ridges, mild proptosis and maxillary hypoplasia) and calcification of the basal ganglia. The disease is associated with a favorable neurological outcome, normal intelligence and is inherited in an autosomal recessive manner.","definition_xrefs":["Orphanet:52054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis-intracranial calcifications syndrome","secondary_identifiers":["OMIM:608432","SCTID:720816004","UMLS:C1842058","GARD:16653","MESH:C564241","MEDGEN:333981"],"synonyms":[{"name":"Longman-Tolmie syndrome","type":"exact"},{"name":"craniosynostosis, calcification of basal ganglia, and facial dysmorphism","type":"related"}],"termid":"MONDO:0012035","xrefs":{"Monarch":{"xref_id":"0012035"}}}


id: GO:0070103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of an interleukin-6-mediated signaling pathway.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-6-mediated signaling pathway","termid":"GO:0070102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-6-mediated signaling pathway","synonyms":[{"name":"regulation of IL-6-mediated signaling pathway","type":"exact"},{"name":"regulation of interleukin-6-mediated signalling pathway","type":"exact"}],"termid":"GO:0070103"}


id: MONDO:0020688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Reduced blood flow to the spinal cord which is supplied by the anterior spinal artery and the paired posterior spinal arteries. This condition may be associated with arteriosclerosis, trauma, emboli, diseases of the aorta, and other disorders. Prolonged ischemia may lead to infarction of spinal cord tissue.","definition_xrefs":["MESH:D020760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stroke disorder","termid":"MONDO:0005098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal cord ischemia","secondary_identifiers":["EFO:1001426","UMLS:C0752130","MEDGEN:155706"],"synonyms":[{"name":"cord Ischemias, spinal","type":"related"},{"name":"cord ischemia, spinal","type":"related"},{"name":"experimental spinal cord ischemia","type":"related"},{"name":"ischaemic myelopathies","type":"related"},{"name":"ischaemic myelopathy","type":"related"},{"name":"ischemia, spinal cord","type":"related"},{"name":"ischemias, spinal cord","type":"related"},{"name":"ischemic myelopathies","type":"related"},{"name":"ischemic myelopathy","type":"related"},{"name":"myelopathies, ischaemic","type":"related"},{"name":"myelopathies, ischemic","type":"related"},{"name":"myelopathy, ischaemic","type":"related"},{"name":"myelopathy, ischemic","type":"related"},{"name":"spinal cord Ischemias","type":"related"},{"name":"spinal cord ischemia, experimental","type":"related"}],"termid":"MONDO:0020688","xrefs":{"Monarch":{"xref_id":"0020688"}}}


id: PATO:0001033
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001033 stiffness (obsolete PATO:0001033)","termid":"PATO:0001033"}


id: GO:0035590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular purine nucleotide binding to its receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:9755289","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"purinergic nucleotide receptor signaling pathway","secondary_identifiers":["GO:0035587","Reactome:R-HSA-9660826"],"synonyms":[{"name":"P2 receptor signaling pathway","type":"related"},{"name":"purinergic nucleotide receptor signalling pathway","type":"exact"},{"name":"purinergic receptor signaling pathway","type":"related"},{"name":"purinergic receptor signalling pathway","type":"related"},{"name":"purinoceptor signaling pathway","type":"related"}],"termid":"GO:0035590"}


id: GO:0048786
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized region of the plasma membrane and cell cortex of a presynaptic neuron; encompasses a region of the plasma membrane where synaptic vesicles dock and fuse, and a specialized cortical cytoskeletal matrix.","definition_xrefs":["GOC:dl","GOC:ef","GOC:jid","PMID:3152289","GOC:pr","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic active zone","secondary_identifiers":["NIF_Subcellular:sao792027222"],"synonyms":[{"name":"pre-synaptic active zone","type":"exact"},{"name":"pre-synaptic active zone component","type":"narrow"},{"name":"presynaptic specialization","type":"exact"}],"termid":"GO:0048786"}


id: GO:0045030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity, activated by UTP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled pyrimidinergic nucleotide receptor activity","termid":"GO:0071553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled UTP receptor activity","secondary_identifiers":["GO:0015065"],"synonyms":[{"name":"UTP-activated nucleotide receptor activity","type":"broad"},{"name":"purinoceptor type U","type":"broad"},{"name":"uridine nucleotide receptor activity","type":"broad"}],"termid":"GO:0045030"}


id: PBO:0085499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein anchored to mitochondrial inner membrane; may have a redundant function with Sco1p in delivery of copper to cytochrome c oxidase; interacts with Cox2p; SCO2 has a paralog, SCO1, that arose from the whole genome duplication","termid":"PBO:0085499"}


id: FYPO:0005920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is normal (i.e. indistinguishable from wild type) at tRNA genes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:21437270","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning","termid":"FYPO:0000856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal nucleosome occupancy at tRNA genes","synonyms":[{"name":"normal nucleosome occupancy at tRNA genes during mitotic cell cycle","type":"related"},{"name":"normal nucleosome occupancy at tRNA genes during vegetative growth","type":"exact"},{"name":"normal nucleosome occupancy in tRNA genes","type":"exact"}],"termid":"FYPO:0005920"}


id: PBO:0047645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 2","termid":"PBO:0047645"}


id: PBO:0053445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 392","termid":"PBO:0053445"}


id: GO:0061732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of acetyl-CoA from pyruvate in the mitochondrion. The process begins with the transport of pyruvate from the cytosol to the mitochondrion where it is subsequently decarboxylated to form acetyl-CoA.","definition_xrefs":["ISBN:0201090910","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial acetyl-CoA biosynthetic process from pyruvate (obsolete GO:0061732)","termid":"GO:0061732"}


id: PR:P15398
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase I subunit RPA1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03577","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.05c","secondary_identifiers":["UniProtKB:P15398"],"synonyms":[{"name":"DNA-directed RNA polymerase I 190 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DNA-directed RNA polymerase I largest subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR1A","type":"exact"}],"termid":"PR:P15398"}


id: PBO:0055347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2775","termid":"PBO:0055347"}


id: MONDO:0018492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A manifestation of von Hippel-Lindau disease or other familial renal cell cancer syndromes that present as a malignant epithelial neoplasm of the kidney. It is characterized by the presence of lipid-containing clear cells within a vascular network. The tumor usually is bilateral and polycentric, and metastasizes to unusual sites. Late metastasis is common.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary renal cell carcinoma","termid":"MONDO:0003008"},{"relation_name":"is_a","term_name":"clear cell renal carcinoma","termid":"MONDO:0005005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"hereditary clear cell renal cell carcinoma","secondary_identifiers":["MEDGEN:234343","NCIT:C36260","SCTID:764961009","Orphanet:422526","DOID:7192","UMLS:C1333985","GARD:9571"],"synonyms":[{"name":"Hereditary clear cell renal cell cancer","type":"exact"},{"name":"hereditary clear cell renal carcinoma","type":"exact"},{"name":"hereditary clear cell renal cell adenocarcinoma","type":"exact"},{"name":"hereditary clear cell renal cell carcinoma","type":"exact"},{"name":"hereditary conventional (clear cell) renal cell carcinoma","type":"exact"},{"name":"hereditary conventional renal cell carcinoma","type":"related"}],"termid":"MONDO:0018492","xrefs":{"Monarch":{"xref_id":"0018492"}}}


id: GO:0009016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + N-succinyl-LL-2,6-diaminopimelate = L-2-succinylamino-6-oxopimelate + L-glutamate.","definition_xrefs":["RHEA:11960","EC:2.6.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"succinyldiaminopimelate transaminase activity","secondary_identifiers":["KEGG_REACTION:R04475","MetaCyc:SUCCINYLDIAMINOPIMTRANS-RXN"],"synonyms":[{"name":"N-succinyl-L-2,6-diaminoheptanedioate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"N-succinyl-L-diaminopimelic glutamic transaminase activity","type":"related"},{"name":"succinyldiaminopimelate aminotransferase activity","type":"exact"},{"name":"succinyldiaminopimelate transferase activity","type":"related"}],"termid":"GO:0009016"}


id: PBO:0077281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 19","termid":"PBO:0077281"}


id: PBO:0039613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A2","termid":"PBO:0039613"}


id: MONDO:0002017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of sporadic and inherited neurodegenerative disorders affecting the cerebellum, pons, and inferior olives.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"olivopontocerebellar atrophy","secondary_identifiers":["SCTID:67761004","ICD9:333.0","MEDGEN:10435","icd11.foundation:1467584080","MESH:D009849","UMLS:C0028968","DOID:14784","NCIT:C84947"],"synonyms":[{"name":"Dejerine-Thomas syndrome","type":"exact"},{"name":"OPCA","type":"related"},{"name":"Thomas' syndrome","type":"related"},{"name":"WADIA-swami syndrome","type":"exact"}],"termid":"MONDO:0002017","xrefs":{"Monarch":{"xref_id":"0002017"}}}


id: PBO:0083694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme that mediates the conjugation of Rub1p; a ubiquitin-like protein, to other proteins; related to E2 ubiquitin-conjugating enzymes","termid":"PBO:0083694"}


id: GO:0004085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: butanoyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = (2E)-butenoyl-CoA + reduced [electron-transfer flavoprotein].","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete butyryl-CoA dehydrogenase activity (obsolete GO:0004085)","termid":"GO:0004085"}


id: PR:O59817
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- efr3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein efr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.08","synonyms":[{"name":"Spom972h-efr3","type":"exact"}],"termid":"PR:O59817"}


id: MONDO:0010383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic syndrome caused by mutations in the FMR1 gene which is responsible for the expression of the fragile X mental retardation 1 protein. This protein participates in neural development. This syndrome is manifested with mental, emotional, behavioral, physical, and learning disabilities.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic genetic obesity (obsolete MONDO:0016565)","termid":"MONDO:0016565"},{"relation_name":"excluded_subClassOf","term_name":"obsolete motor stereotypies (obsolete MONDO:0017656)","termid":"MONDO:0017656"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile X syndrome","secondary_identifiers":["NANDO:1200692","Orphanet:908","GARD:6464","MedDRA:10017324","icd11.foundation:1524287677","DOID:14261","NCIT:C84717","NANDO:2200840","ICD9:759.83","MESH:D005600","MEDGEN:8912","SCTID:613003","UMLS:C0016667","NANDO:2100224","OMIM:300624"],"synonyms":[{"name":"FRAXA syndrome","type":"exact"},{"name":"FXS","type":"exact"},{"name":"FraX syndrome","type":"exact"},{"name":"Fragile X syndrome, X-linked dominant","type":"exact"},{"name":"Martin-Bell syndrome","type":"exact"},{"name":"X-linked intellectual disability and macroorchidism","type":"related"},{"name":"X-linked mental retardation and macroorchidism","type":"related"},{"name":"fra(X) syndrome","type":"related"},{"name":"fragile 10 intellectual disability syndrome","type":"related"},{"name":"fragile 10 mental retardation syndrome","type":"related"},{"name":"fragile 10 premature ovarian failure","type":"related"},{"name":"fragile 10 syndrome","type":"related"},{"name":"fragile X intellectual disability syndrome","type":"exact"},{"name":"fragile X mental retardation syndrome","type":"exact"},{"name":"fragile X syndrome","type":"exact"},{"name":"intellectual disability, X-linked, associated with Marxq28","type":"related"},{"name":"marker 10 syndrome","type":"related"},{"name":"marker X syndrome","type":"exact"},{"name":"mental retardation, X-linked, associated with Marxq28","type":"related"},{"name":"primary ovarian insufficiency, fragile X-associated","type":"related"}],"termid":"MONDO:0010383","xrefs":{"Monarch":{"xref_id":"0010383"}}}


id: GO:0019349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ribitol, a pentitol derived formally by reduction of the -CHO group of either D- or L-ribose. It occurs free in some plants and is a component of riboflavin.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentitol metabolic process","termid":"GO:0019519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ribitol metabolic process","synonyms":[{"name":"ribitol metabolism","type":"exact"}],"termid":"GO:0019349"}


id: FYPO:0002994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin during mitotic S phase","synonyms":[{"name":"increased protein localisation to chromatin during mitotic S phase","type":"exact"},{"name":"increased protein localization to chromatin during mitotic S phase during vegetative growth","type":"exact"}],"termid":"FYPO:0002994"}


id: FYPO:0004291
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at GT dinucleotide microsatellite repeat regions by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased microsatellite DNA binding","termid":"FYPO:0004290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased GT microsatellite DNA binding","synonyms":[{"name":"decreased GT dinucleotide microsatellite repeat binding","type":"exact"},{"name":"decreased microsatellite (GT) DNA binding","type":"exact"},{"name":"reduced GT microsatellite DNA binding","type":"exact"}],"termid":"FYPO:0004291"}


id: PBO:0055503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2937","termid":"PBO:0055503"}


id: GO:0021997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process in which the axes of the nervous system are established.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic axis specification","termid":"GO:0000578"},{"relation_name":"part_of","term_name":"neural plate development","termid":"GO:0001840"},{"relation_name":"part_of","term_name":"neural plate pattern specification","termid":"GO:0060896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate axis specification","synonyms":[{"name":"neural plate axis determination","type":"related"}],"termid":"GO:0021997"}


id: GO:0140870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of RNA polymerase.","definition_xrefs":["PMID:18313387","PMID:31048766","PMID:15300239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140678","GO:0004857","GO:0030234"],"is_obsolete":false,"name":"RNA polymerase inhibitor activity","termid":"GO:0140870"}


id: MONDO:0021013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of trichothiodystrophy caused by mutation(s) in the MPLKIP gene, encoding M-phase-specific PLK1-interacting protein.","definition_xrefs":["NCIT:C146899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichothiodystrophy","termid":"MONDO:0018053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy 4, nonphotosensitive","secondary_identifiers":["SCTID:403796005","DOID:0050528","Orphanet:75790","GARD:5271","MEDGEN:272036","ICD9:704.8","ICD9:783.43","OMIM:234050","UMLS:C1313961"],"synonyms":[{"name":"Amish brittle hair brain syndrome","type":"related"},{"name":"BIDS syndrome","type":"related"},{"name":"MPLKIP nonphotosensitive trichothiodystrophy","type":"exact"},{"name":"Pollitt syndrome","type":"exact"},{"name":"TTD4","type":"exact"},{"name":"hair-brain syndrome","type":"related"},{"name":"nonphotosensitive trichothiodystrophy","type":"related"},{"name":"nonphotosensitive trichothiodystrophy caused by mutation in MPLKIP","type":"exact"},{"name":"trichothiodystrophy 4, nonphotosensitive","type":"exact"},{"name":"trichothiodystrophy, nonphotosensitive 1","type":"related"},{"name":"trichothiodystrophy-neurocutaneous syndrome","type":"related"}],"termid":"MONDO:0021013","xrefs":{"Monarch":{"xref_id":"0021013"}}}


id: GO:0017113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6-dihydrouracil + NADP+ = uracil + NADPH + H+.","definition_xrefs":["EC:1.3.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"dihydropyrimidine dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:18093","MetaCyc:1.3.1.2-RXN","Reactome:R-HSA-73585","Reactome:R-HSA-73616"],"synonyms":[{"name":"4,5-dihydrothymine: oxidoreductase activity","type":"related"},{"name":"5,6-dihydrouracil:NADP+ 5-oxidoreductase activity","type":"related"},{"name":"DHPDH","type":"related"},{"name":"DHU dehydrogenase activity","type":"related"},{"name":"DPD","type":"related"},{"name":"dehydrogenase, dihydrouracil (nicotinamide adenine dinucleotide phosphate)","type":"related"},{"name":"dihydropyrimidine dehydrogenase activity","type":"exact"},{"name":"dihydrothymine dehydrogenase activity","type":"related"},{"name":"dihydrouracil dehydrogenase (NADP)","type":"related"},{"name":"dihydrouracil dehydrogenase (NADP+) activity","type":"related"},{"name":"hydropyrimidine dehydrogenase activity","type":"related"}],"termid":"GO:0017113"}


id: GO:2001019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retrograde axon cargo transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of retrograde axon cargo transport","termid":"GO:2001017"},{"relation_name":"positively_regulates","term_name":"retrograde axonal transport","termid":"GO:0008090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of retrograde axon cargo transport","synonyms":[{"name":"positive regulation of retrograde axonal transport","type":"exact"}],"termid":"GO:2001019"}


id: GO:1903974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to macrophage colony-stimulating factor stimulus.","definition_xrefs":["GOC:TermGenie","PMID:19100238","GO_REF:0000058","GOC:BHF","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to macrophage colony-stimulating factor","termid":"GO:1903971"},{"relation_name":"is_a","term_name":"regulation of cellular response to macrophage colony-stimulating factor stimulus","termid":"GO:1903972"},{"relation_name":"positively_regulates","term_name":"cellular response to macrophage colony-stimulating factor stimulus","termid":"GO:0036006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to macrophage colony-stimulating factor stimulus","synonyms":[{"name":"activation of cellular response to M-CSF stimulus","type":"narrow"},{"name":"activation of cellular response to macrophage colony-stimulating factor","type":"narrow"},{"name":"activation of cellular response to macrophage colony-stimulating factor stimulus","type":"narrow"},{"name":"positive regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"positive regulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"up regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"up regulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"up regulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"up-regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"up-regulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"up-regulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"upregulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"upregulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"upregulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"}],"termid":"GO:1903974"}


id: PR:P36209
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sts1 gene.","definition_xrefs":["UniProtKB:P36209","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta(24(24(1)))-sterol reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.07c","synonyms":[{"name":"C-24(28) sterol reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sts1","type":"exact"},{"name":"sterol Delta(24(28))-reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36209"}


id: PBO:0049792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 27","termid":"PBO:0049792"}


id: PBO:0029523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_septated_spheroid_vegetative_cell","termid":"PBO:0029523"}


id: PBO:0078038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 28","termid":"PBO:0078038"}


id: PBO:0033763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_chromosome_arms","termid":"PBO:0033763"}


id: GO:1902372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tRNA catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of tRNA catabolic process","termid":"GO:1902370"},{"relation_name":"is_a","term_name":"positive regulation of tRNA metabolic process","termid":"GO:1903328"},{"relation_name":"positively_regulates","term_name":"tRNA decay","termid":"GO:0016078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"positively_regulates","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tRNA catabolic process","synonyms":[{"name":"activation of tRNA breakdown","type":"narrow"},{"name":"activation of tRNA catabolic process","type":"narrow"},{"name":"activation of tRNA catabolism","type":"narrow"},{"name":"activation of tRNA degradation","type":"narrow"},{"name":"positive regulation of tRNA breakdown","type":"exact"},{"name":"positive regulation of tRNA catabolism","type":"exact"},{"name":"positive regulation of tRNA degradation","type":"exact"},{"name":"up regulation of tRNA breakdown","type":"exact"},{"name":"up regulation of tRNA catabolic process","type":"exact"},{"name":"up regulation of tRNA catabolism","type":"exact"},{"name":"up regulation of tRNA degradation","type":"exact"},{"name":"up-regulation of tRNA breakdown","type":"exact"},{"name":"up-regulation of tRNA catabolic process","type":"exact"},{"name":"up-regulation of tRNA catabolism","type":"exact"},{"name":"up-regulation of tRNA degradation","type":"exact"},{"name":"upregulation of tRNA breakdown","type":"exact"},{"name":"upregulation of tRNA catabolic process","type":"exact"},{"name":"upregulation of tRNA catabolism","type":"exact"},{"name":"upregulation of tRNA degradation","type":"exact"}],"termid":"GO:1902372"}


id: GO:0060647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell adhesion process in which mammary mesenchyme cells adhere to one another in the initial stages of the formation of mammary fat development.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"mammary gland fat development","termid":"GO:0060611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"mesenchymal cell condensation involved in mammary fat development","termid":"GO:0060647"}


id: MOD:01707
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with an isotope tagged reagent acyloxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotope tagged reagent O-acylated residue","termid":"MOD:01707"}


id: PBO:0029192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-merotelic_kinetochore_attachment","termid":"PBO:0029192"}


id: PBO:0043094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 6","termid":"PBO:0043094"}


id: MONDO:0017371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare head and neck neoplasia.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare head and neck tumor (obsolete MONDO:0017371)","secondary_identifiers":["Orphanet:290849"],"synonyms":[{"name":"rare head and neck neoplasia","type":"exact"},{"name":"rare head and neck neoplasm","type":"exact"}],"termid":"MONDO:0017371","xrefs":{"Monarch":{"xref_id":"0017371"}}}


id: PBO:0085293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pheromone-regulated multispanning membrane protein; involved in membrane fusion during mating; predicted to have 5 transmembrane segments and a coiled coil domain; localizes to the shmoo tip; regulated by Ste12p","termid":"PBO:0085293"}


id: MONDO:1011654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial digital syndrome, non-human animal","secondary_identifiers":["OMIA:000360"],"termid":"MONDO:1011654","xrefs":{"Monarch":{"xref_id":"1011654"}}}


id: GO:0039646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with the normal execution of the host cell G0/G1 transition checkpoint. The host is defined as the larger of the organisms involved in a symbiotic interaction. Some viruses benefit from keeping cells in resting state (G0), while others favor entry through G1 and subsequent cell division to replicate more efficiently.","definition_xrefs":["VZ:880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell cycle G0/G1 transition checkpoint","secondary_identifiers":["VZ:881"],"synonyms":[{"name":"G0/G1 host cell cycle checkpoint dysregulation by virus","type":"narrow"},{"name":"modulation by virus of host G0/G1 transition checkpoint","type":"narrow"},{"name":"perturbation by virus of host G0/G1 transition checkpoint","type":"narrow"}],"termid":"GO:0039646"}


id: MONDO:0017090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete midline cerebral malformation (obsolete MONDO:0017090)","secondary_identifiers":["Orphanet:268926"],"synonyms":[{"name":"Midline brain malformation","type":"exact"}],"termid":"MONDO:0017090","xrefs":{"Monarch":{"xref_id":"0017090"}}}


id: FYPO:0008079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate and other catalytic properties of a inositol heptakisphosphate 5-kinase are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:36468882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal inositol heptakisphosphate 5-kinase activity","termid":"FYPO:0008079"}


id: PBO:0001713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg24 (predicted)","termid":"PBO:0001713"}


id: MONDO:0006906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pigmented villonodular synovitis (obsolete MONDO:0006906)","termid":"MONDO:0006906","xrefs":{"Monarch":{"xref_id":"0006906"}}}


id: PBO:0085416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter for choline, ethanolamine, and carnitine; involved in the uptake of nitrogen mustard and the uptake of glycine betaine during hypersaline stress; co-regulated with phospholipid biosynthetic genes and negatively regulated by choline and myo-inositol","termid":"PBO:0085416"}


id: PBO:0051439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-24 (pseudogene)","termid":"PBO:0051439"}


id: FYPO:0003249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H3 measured at centromeric dh repeat regions is lower than normal.","definition_xrefs":["PomBase:mah","PMID:22291963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of histone H3 in cell","termid":"FYPO:0004578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of histone H3 at dh repeat","synonyms":[{"name":"decreased level of histone H3 at dh repeat during mitotic cell cycle","type":"related"},{"name":"decreased level of histone H3 at dh repeat during vegetative growth","type":"exact"},{"name":"reduced level of histone H3 at dh repeat","type":"exact"}],"termid":"FYPO:0003249"}


id: PBO:0002769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1 repeat protein, unknown biological role","termid":"PBO:0002769"}


id: MONDO:0015849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare vaginal malformation characterized by the presence of a complete or incomplete septum dividing the vagina into two parallel cavities, resulting from failure of reabsorption of the midline uterine septum between the two fused Müllerian ducts during embryogenesis. Patients are often asymptomatic, but may present with menorrhagia, dysmenorrhea, dyspareunia, infertility, or spontaneous abortion. The condition may occur as an isolated malformation or in association with other Müllerian duct anomalies (such as septate uterus or uterus didelphys) or renal abnormalities.","definition_xrefs":["Orphanet:180157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longitudinal vaginal septum","secondary_identifiers":["MEDGEN:331104","UMLS:C1841680","GARD:20190","HP:0008740","icd11.foundation:1594393492"],"termid":"MONDO:0015849","xrefs":{"Monarch":{"xref_id":"0015849"}}}


id: GO:0061475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling valine to valyl-tRNA in the cytosol, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valyl-tRNA aminoacylation","termid":"GO:0006438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006520","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"cytosolic valyl-tRNA aminoacylation","termid":"GO:0061475"}


id: PBO:0069575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 848, pseudogene","termid":"PBO:0069575"}


id: GO:0071948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"B cell apoptotic process that occurs upon engagement of either the B cell receptor or CD40. Engagement of either receptor, but not both, leads to expression of fas or related receptors that make the B cell susceptible to fas-ligand mediated death.","definition_xrefs":["GOC:tfm","GOC:mtg_apoptosis","PMID:11032170","PMID:19300454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation-induced B cell apoptotic process","synonyms":[{"name":"AICD","type":"broad"},{"name":"activated B cell apoptosis","type":"broad"},{"name":"activation-induced B cell apoptosis","type":"narrow"},{"name":"activation-induced B-cell apoptosis","type":"exact"},{"name":"activation-induced cell death of B cells","type":"exact"},{"name":"activation-induced cell death of B lymphocytes","type":"exact"},{"name":"activation-induced cell death of B-cells","type":"exact"},{"name":"activation-induced cell death of B-lymphocytes","type":"exact"},{"name":"antigen-driven apoptosis","type":"broad"}],"termid":"GO:0071948"}


id: GO:0090400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular senescence process associated with the dismantling of a cell as a response to environmental factors such as hydrogen peroxide or X-rays.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular senescence","termid":"GO:0090398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stress-induced premature senescence","synonyms":[{"name":"SIPS","type":"exact"}],"termid":"GO:0090400"}


id: FYPO:0006618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during a cellular response to bleomycin.","definition_xrefs":["PMID:22064477","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased number of Rad52 foci during cellular response to bleomycin","synonyms":[{"name":"increased number of Rad22 foci during cellular response to bleomycin","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to DNA damage","type":"related"},{"name":"increased number of Rad52 foci during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci during cellular response to bleomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0006618"}


id: PBO:0054495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1895","termid":"PBO:0054495"}


id: PBO:0000747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Bet1 (predicted)","termid":"PBO:0000747"}


id: GO:0044289
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Sites of close apposition of the inner and outer mitochondrial membrane.","definition_xrefs":["PMID:22009199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"},{"relation_name":"part_of","term_name":"mitochondrial membrane","termid":"GO:0031966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005739"],"is_obsolete":false,"name":"mitochondrial inner-outer membrane contact site","secondary_identifiers":["GO:0044285"],"synonyms":[{"name":"bridge contact site","type":"related"},{"name":"contact site","type":"broad"}],"termid":"GO:0044289"}


id: PBO:0036553
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TYRosine requiring","termid":"PBO:0036553"}


id: MONDO:0958240
data:
  {"annotated_genes":["SJAG_01571"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87443],"is_not":false,"summary":null,"term":"MONDO:0958240"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01571":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hyperkinetic movements, seizures, and structural brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620732","UMLS:C5935585","MEDGEN:1863149"],"termid":"MONDO:0958240","terms_by_termid":{"MONDO:0958240":null},"xrefs":{"Monarch":{"xref_id":"0958240"}}}


id: GO:0050245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + quercitrin = L-rhamnose + quercetin.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete quercitrinase activity (obsolete GO:0050245)","termid":"GO:0050245"}


id: PBO:0050530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hippocalcin like 4","termid":"PBO:0050530"}


id: MONDO:0017070
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myelomeningocele","termid":"MONDO:0019773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"total spina bifida cystica","secondary_identifiers":["Orphanet:268748","GARD:20959"],"termid":"MONDO:0017070","xrefs":{"Monarch":{"xref_id":"0017070"}}}


id: GO:1905199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a manchette into its constituent components.","definition_xrefs":["GO_REF:0000079","PMID:22319670","PMID:26792866","GOC:TermGenie","GOC:krc","PMID:24440897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"manchette disassembly","termid":"GO:1905199"}


id: PBO:0058918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7a-1","termid":"PBO:0058918"}


id: PBO:0066484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFPL1 antisense RNA 1","termid":"PBO:0066484"}


id: PBO:0071040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 42","termid":"PBO:0071040"}


id: MONDO:0005958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sex cord-stromal tumor (obsolete MONDO:0005958)","termid":"MONDO:0005958","xrefs":{"Monarch":{"xref_id":"0005958"}}}


id: FYPO:0003684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount of any macromolecular complex present in a cell differs from wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex","termid":"FYPO:0007316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered level of macromolecular complex during vegetative growth","synonyms":[{"name":"abnormal level of macromolecular complex during vegetative growth","type":"exact"},{"name":"altered level of macromolecular complex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003684"}


id: MONDO:0005070
data:
  {"annotated_genes":["SJAG_02187","SJAG_03905","SJAG_00490","SJAG_04206","SJAG_01156","SJAG_04394","SJAG_02226","SJAG_02261","SJAG_00579","SJAG_00079","SJAG_05979","SJAG_03453","SJAG_00289","SJAG_05346","SJAG_00991","SJAG_04213","SJAG_04755","SJAG_02398","SJAG_00997","SJAG_00757","SJAG_05313","SJAG_03720","SJAG_03429","SJAG_03163","SJAG_04699","SJAG_00260","SJAG_04287","SJAG_03881","SJAG_00440","SJAG_01151","SJAG_03787","SJAG_02527","SJAG_04114","SJAG_01671","SJAG_02748","SJAG_02426","SJAG_01837","SJAG_01419","SJAG_01013","SJAG_03920","SJAG_02460","SJAG_01620","SJAG_03081","SJAG_03689","SJAG_04885","SJAG_01144","SJAG_01970","SJAG_01748","SJAG_03576","SJAG_01349","SJAG_00980","SJAG_02231","SJAG_01082","SJAG_02855","SJAG_02049","SJAG_04502","SJAG_00031","SJAG_03677","SJAG_00229","SJAG_01008","SJAG_01895","SJAG_04067","SJAG_01111","SJAG_03424","SJAG_01410","SJAG_01548","SJAG_03131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87537,87538,87539,87691,87692,87536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[86633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011655"},{"annotations":[87500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[86032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007154"},{"annotations":[86497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"},{"annotations":[85666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[86816,86811,86810,86817,86812,87662,86814,86813,86815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005575"},{"annotations":[87062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[87121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007205"},{"annotations":[85379,87593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[87623,87622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011789"},{"annotations":[87379,87378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001056"},{"annotations":[87138,87139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011719"},{"annotations":[86972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"},{"annotations":[87651,86529,86532,86528,86531,87649,87653,87650,86530,87652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016419"},{"annotations":[86491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"},{"annotations":[87454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"},{"annotations":[86000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[86001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"},{"annotations":[87124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044792"},{"annotations":[86216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[87137,87668,87136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[87263,87264,87265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011705"},{"annotations":[86512,86513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011508"},{"annotations":[86702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[85526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[85974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[85976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[87670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007959"},{"annotations":[85987,85986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"},{"annotations":[87017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"},{"annotations":[86003,86004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018881"},{"annotations":[86055,86054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"},{"annotations":[85798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[85375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008093"},{"annotations":[87109,87111,87110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007763"},{"annotations":[86177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[87352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[87262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotati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benign or malignant tissue growth resulting from uncontrolled cell proliferation. Benign neoplastic cells resemble normal cells without exhibiting significant cytologic atypia, while malignant cells exhibit overt signs such as dysplastic features, atypical mitotic figures, necrosis, nuclear pleomorphism, and anaplasia. Representative examples of benign neoplasms include papillomas, cystadenomas, and lipomas; malignant neoplasms include carcinomas, sarcomas, lymphomas, and leukemias.","definition_xrefs":["NCIT:C3262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplastic disease or syndrome","termid":"MONDO:0023370"}],"gene_count":67,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00079":null,"SJAG_00229":null,"SJAG_00260":null,"SJAG_00289":null,"SJAG_00440":null,"SJAG_00490":null,"SJAG_00579":null,"SJAG_00757":null,"SJAG_00980":null,"SJAG_00991":null,"SJAG_00997":null,"SJAG_01008":null,"SJAG_01013":null,"SJAG_01082":null,"SJAG_01111":null,"SJAG_01144":null,"SJAG_01151":null,"SJAG_01156":null,"SJAG_01349":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01548":null,"SJAG_01620":null,"SJAG_01671":null,"SJAG_01748":null,"SJAG_01837":null,"SJAG_01895":null,"SJAG_01970":null,"SJAG_02049":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02261":null,"SJAG_02398":null,"SJAG_02426":null,"SJAG_02460":null,"SJAG_02527":null,"SJAG_02748":null,"SJAG_02855":null,"SJAG_03081":null,"SJAG_03131":null,"SJAG_03163":null,"SJAG_03424":null,"SJAG_03429":null,"SJAG_03453":null,"SJAG_03576":null,"SJAG_03677":null,"SJAG_03689":null,"SJAG_03720":null,"SJAG_03787":null,"SJAG_03881":null,"SJAG_03905":null,"SJAG_03920":null,"SJAG_04067":null,"SJAG_04114":null,"SJAG_04206":null,"SJAG_04213":null,"SJAG_04287":null,"SJAG_04394":null,"SJAG_04502":null,"SJAG_04699":null,"SJAG_04755":null,"SJAG_04885":null,"SJAG_05313":null,"SJAG_05346":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0000616","ICD10CM:C7B-C7B","MEDGEN:10294","ICD10CM:C7A-C7A","MESH:D009369","DOID:14566","ONCOTREE:OTHER","ICD9:140-239.99","SCTID:55342001","UMLS:C0027651","ICD9:239.9","HP:0002664","ICD10CM:C00-D49","ICD9:239.8"],"synonyms":[{"name":"cell process disease","type":"broad"},{"name":"disease of cellular proliferation","type":"exact"},{"name":"neoplasia","type":"exact"},{"name":"neoplasm","type":"exact"},{"name":"neoplasm (disease)","type":"exact"},{"name":"neoplastic disease","type":"exact"},{"name":"neoplastic growth","type":"exact"},{"name":"other neoplasm","type":"narrow"},{"name":"tumor","type":"exact"},{"name":"tumor disease","type":"exact"},{"name":"tumour","type":"exact"},{"name":"tumour disease","type":"exact"}],"termid":"MONDO:0005070","terms_by_termid":{"MONDO:0001056":null,"MONDO:0001187":null,"MONDO:0002629":null,"MONDO:0003789":null,"MONDO:0005575":null,"MONDO:0007154":null,"MONDO:0007205":null,"MONDO:0007256":null,"MONDO:0007273":null,"MONDO:0007356":null,"MONDO:0007763":null,"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0007908":null,"MONDO:0007925":null,"MONDO:0007959":null,"MONDO:0008018":null,"MONDO:0008093":null,"MONDO:0008097":null,"MONDO:0008192":null,"MONDO:0008566":null,"MONDO:0008903":null,"MONDO:0009050":null,"MONDO:0009578":null,"MONDO:0009693":null,"MONDO:0010621":null,"MONDO:0011014":null,"MONDO:0011121":null,"MONDO:0011508":null,"MONDO:0011544":null,"MONDO:0011655":null,"MONDO:0011705":null,"MONDO:0011719":null,"MONDO:0011789":null,"MONDO:0011962":null,"MONDO:0012004":null,"MONDO:0012249":null,"MONDO:0012252":null,"MONDO:0013224":null,"MONDO:0013602":null,"MONDO:0013699":null,"MONDO:0013710":null,"MONDO:0013872":null,"MONDO:0014937":null,"MONDO:0016419":null,"MONDO:0018874":null,"MONDO:0018881":null,"MONDO:0024517":null,"MONDO:0032747":null,"MONDO:0032771":null,"MONDO:0044792":null,"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0005070"}}}


id: MONDO:0016959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 8","termid":"MONDO:0016929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 8","secondary_identifiers":["icd11.foundation:397762525","MEDGEN:1826035","Orphanet:262896","UMLS:C5679703","GARD:20879"],"synonyms":[{"name":"partial duplication of chromosome 8q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 8","type":"exact"},{"name":"partial trisomy of chromosome 8q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 8","type":"exact"}],"termid":"MONDO:0016959","xrefs":{"Monarch":{"xref_id":"0016959"}}}


id: PBO:0076603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 22B","termid":"PBO:0076603"}


id: GO:0008586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the veins on an imaginal disc-derived wing are generated and organized.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing vein morphogenesis","synonyms":[{"name":"wing vein morphogenesis","type":"exact"}],"termid":"GO:0008586"}


id: PATO:0000699
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000699 glutinous (obsolete PATO:0000699)","termid":"PATO:0000699"}


id: GO:0002599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of lipid antigen via MHC class Ib.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation via MHC class Ib","termid":"GO:0002593"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0002598"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of lipid antigen via MHC class Ib","synonyms":[{"name":"down regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"down-regulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"downregulation of antigen processing and presentation of lipid antigen via MHC class Ib","type":"exact"},{"name":"inhibition of antigen processing and presentation of lipid antigen via MHC class Ib","type":"narrow"},{"name":"negative regulation of lipid antigen processing and presentation via MHC class Ib","type":"exact"}],"termid":"GO:0002599"}


id: MONDO:1012640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any von Willebrand disease that occurs in dogs and is characterized by low plasma vWF concentrations and mild to moderate bleeding symptoms due to a mutation in the VWF gene.","definition_xrefs":["OMIA:001057-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Von Willebrand disease, dog","termid":"MONDO:1011612"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand disease I, dog","synonyms":[{"name":"type 1 von Willebrand disease, dog","type":"related"},{"name":"vWDI","type":"exact"}],"termid":"MONDO:1012640","xrefs":{"Monarch":{"xref_id":"1012640"}}}


id: MONDO:0020222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disease with glaucoma as a major feature (obsolete MONDO:0020222)","secondary_identifiers":["Orphanet:98638"],"termid":"MONDO:0020222","xrefs":{"Monarch":{"xref_id":"0020222"}}}


id: PR:O59697
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59697"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32C12.03c","synonyms":[{"name":"Spom972h-ppk25","type":"exact"}],"termid":"PR:O59697"}


id: MONDO:0008058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cylindrical spirals myopathy is a rare form of congenital myopathy characterized by global muscle weakness, hypotonia, myotonia and cramps in the presence of cylindrical, spiral-shaped inclusions (located in the central and/or subsacrolemmal areas of muscle fibers) in skeletal muscle biopsy. Abnormal gait, scoliosis, epileptic encephalopathy and psychomotor delay may be associated.","definition_xrefs":["Orphanet:171886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"cylindrical spirals myopathy","secondary_identifiers":["icd11.foundation:1555346098","OMIM:160990","MEDGEN:371817","GARD:11906","DOID:0080103","UMLS:C1834418","SCTID:764525006","MESH:C563535"],"synonyms":[{"name":"myotonic myopathy with cylindrical spirals","type":"related"}],"termid":"MONDO:0008058","xrefs":{"Monarch":{"xref_id":"0008058"}}}


id: GO:0001782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["PMID:12956429","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte homeostasis","termid":"GO:0002260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell homeostasis","synonyms":[{"name":"B lymphocyte homeostasis","type":"exact"},{"name":"B-cell homeostasis","type":"exact"},{"name":"B-lymphocyte homeostasis","type":"exact"}],"termid":"GO:0001782"}


id: PBO:0088986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-bisphosphate aldolase, class-II","termid":"PBO:0088986"}


id: MONDO:0002589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thymoma type AB (obsolete MONDO:0002589)","termid":"MONDO:0002589","xrefs":{"Monarch":{"xref_id":"0002589"}}}


id: PBO:0060165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 13 (pseudogene)","termid":"PBO:0060165"}


id: MONDO:0017565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"macrodactyly of fingers","termid":"MONDO:0017474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrodactyly of fingers, bilateral","secondary_identifiers":["UMLS:C5437813","icd11.foundation:514958635","GARD:21228","MEDGEN:1730289","Orphanet:295241"],"synonyms":[{"name":"macrodactyly of hand, bilateral","type":"exact"}],"termid":"MONDO:0017565","xrefs":{"Monarch":{"xref_id":"0017565"}}}


id: GO:0061340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of a monopolar intracellular organization or cell growth patterns that regulate the shape of a cell.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of monopolar cell polarity","termid":"GO:0061339"},{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity regulating cell shape","termid":"GO:0071963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment or maintenance of monopolar cell polarity regulating cell shape","termid":"GO:0061340"}


id: MONDO:0014849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive nonsyndromic deafness 105 (obsolete MONDO:0014849)","secondary_identifiers":["OMIM:616958"],"termid":"MONDO:0014849","xrefs":{"Monarch":{"xref_id":"0014849"}}}


id: GO:0030439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK during sporulation (sensu Fungi) (obsolete GO:0030439)","synonyms":[{"name":"activation of MAPK during sporulation (sensu Fungi)","type":"exact"}],"termid":"GO:0030439"}


id: MONDO:0971008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyloid neuropathy","termid":"MONDO:0007100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"amyloidosis, hereditary systemic 3","secondary_identifiers":["MEDGEN:1635231","OMIM:620657","UMLS:C4551500"],"termid":"MONDO:0971008","xrefs":{"Monarch":{"xref_id":"0971008"}}}


id: PBO:0068224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 531","termid":"PBO:0068224"}


id: PR:O14126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit 6A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01437","PANTHER:PTHR23073:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease regulatory subunit 6A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.12c","secondary_identifiers":["UniProtKB:O14126"],"synonyms":[{"name":"Spom972h-PSMC3","type":"exact"}],"termid":"PR:O14126"}


id: GO:0043494
data:
  {"annotated_genes":["SJAG_00341","SJAG_04574","SJAG_01540","SJAG_02119","SJAG_03680","SJAG_00756"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94674,97051,110851,114364,118082,119209],"is_not":false,"summary":null,"term":"GO:0043494"}]},"cv_name":"cellular_component","definition":"An cullin-dependent E3 ubiquitin ligase/histone H3-K9 methyltransferase complex essential for heterochromatin assembly by RNAi.","definition_xrefs":["GOC:vw","PMID:16127433","PMID:20211136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ubiquitin ligase complex","termid":"GO:0000152"},{"relation_name":"is_a","term_name":"histone methyltransferase complex","termid":"GO:0035097"},{"relation_name":"is_a","term_name":"Cul4-RING E3 ubiquitin ligase complex","termid":"GO:0080008"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_00756":null,"SJAG_01540":null,"SJAG_02119":null,"SJAG_03680":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005654","GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CLRC complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CLRC ubiquitin ligase complex","type":"exact"},{"name":"Clr4-Rik1-Cul4 complex","type":"exact"},{"name":"Rik1 E3 ubiquitin ligase complex","type":"exact"},{"name":"Rik1-E3 ubiquitin ligase complex","type":"exact"}],"termid":"GO:0043494","terms_by_termid":{"GO:0043494":null}}


id: MONDO:0002628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive malignant bone-forming mesenchymal neoplasm arising from the surface of the bone.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone osteosarcoma","termid":"MONDO:0002629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peripheral osteosarcoma","secondary_identifiers":["DOID:3374","MEDGEN:272379","UMLS:C1332591","NCIT:C7134"],"synonyms":[{"name":"bone surface (peripheral) osteosarcoma","type":"exact"},{"name":"peripheral osteosarcoma","type":"exact"},{"name":"surface osteosarcoma","type":"exact"}],"termid":"MONDO:0002628","xrefs":{"Monarch":{"xref_id":"0002628"}}}


id: GO:0002309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a T cell population by cell division as part of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation involved in immune response","termid":"GO:0002286"},{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell proliferation involved in immune response","synonyms":[{"name":"T cell proliferation during immune response","type":"related"},{"name":"T lymphocyte proliferation during immune response","type":"related"},{"name":"T-cell proliferation during immune response","type":"related"},{"name":"T-lymphocyte proliferation during immune response","type":"related"}],"termid":"GO:0002309"}


id: PBO:0041085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRO1 domain and CAAX motif containing","termid":"PBO:0041085"}


id: GO:1900308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltoheptaose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heptasaccharide transport","termid":"GO:1900296"},{"relation_name":"is_a","term_name":"regulation of maltoheptaose transport","termid":"GO:1900306"},{"relation_name":"positively_regulates","term_name":"maltoheptaose transport","termid":"GO:2001105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maltoheptaose transport","synonyms":[{"name":"activation of maltoheptaose transport","type":"narrow"},{"name":"up regulation of maltoheptaose transport","type":"exact"},{"name":"up-regulation of maltoheptaose transport","type":"exact"},{"name":"upregulation of maltoheptaose transport","type":"exact"}],"termid":"GO:1900308"}


id: PBO:0071226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 67","termid":"PBO:0071226"}


id: PBO:0053301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-7 homolog C, crumbs cell polarity complex component","termid":"PBO:0053301"}


id: FYPO:0006507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which duplication of DNA sequences in the subtelomeric region occur more frequently than in wild type cells during G0 phase.","definition_xrefs":["PomBase:mah","PMID:29167439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased gross chromosomal rearrangement","termid":"FYPO:0001740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased subtelomeric DNA amplification during G0","synonyms":[{"name":"increased occurrence of subtelomeric DNA amplification during G0","type":"exact"},{"name":"increased subtelomeric DNA amplification during cell quiescence","type":"exact"},{"name":"increased subtelomeric DNA amplification during quiescence","type":"exact"},{"name":"increased subtelomeric DNA sequence duplication during G0","type":"exact"},{"name":"increased subtelomeric amplification during G0","type":"exact"}],"termid":"FYPO:0006507"}


id: PBO:0090352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex TPR repeat subunit Ski3","termid":"PBO:0090352"}


id: PBO:0078716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAA) 1-1","termid":"PBO:0078716"}


id: PBO:0043629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit beta 1","termid":"PBO:0043629"}


id: FYPO:0000466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the occurrence of invasive growth is decreased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased invasive growth (obsolete FYPO:0000466)","synonyms":[{"name":"invasive growth: decreased","type":"related"},{"name":"reduced invasive growth","type":"exact"}],"termid":"FYPO:0000466"}


id: MONDO:1010851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any glycogen storage disease that occurs in cats due to a mutation in the GAA gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disease, GAA-related, domestic cat","secondary_identifiers":["OMIA:000419-9685"],"synonyms":[{"name":"glycogen storage disease II, domestic cat","type":"related"}],"termid":"MONDO:1010851","xrefs":{"Monarch":{"xref_id":"1010851"}}}


id: GO:1904317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:9321918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","termid":"GO:1904316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","synonyms":[{"name":"cellular response to PAF","type":"exact"},{"name":"cellular response to platelet-activating factor","type":"exact"}],"termid":"GO:1904317"}


id: PBO:0045595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 6 (pseudogene)","termid":"PBO:0045595"}


id: MONDO:0016898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 20","termid":"MONDO:0016882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial monosomy of the short arm of chromosome 20","secondary_identifiers":["MESH:C535370","Orphanet:261992","GARD:20820","icd11.foundation:274545745","UMLS:C5679673","MEDGEN:1826023"],"synonyms":[{"name":"20p deletion","type":"related"},{"name":"20p monosomy","type":"related"},{"name":"Pure partial 20p deletion","type":"exact"},{"name":"chromosome 20p deletion","type":"related"},{"name":"deletion 20p","type":"related"},{"name":"monosomy 20p","type":"related"},{"name":"partial deletion of chromosome 20p","type":"exact"},{"name":"partial deletion of the short arm of chromosome 20","type":"exact"},{"name":"partial monosomy 20p","type":"related"},{"name":"partial monosomy of chromosome 20p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome type 20","type":"exact"}],"termid":"MONDO:0016898","xrefs":{"Monarch":{"xref_id":"0016898"}}}


id: PATO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to detect or perceive external stimulation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitivity toward","synonyms":[{"name":"sensitivity","type":"exact"}],"termid":"PATO:0000085"}


id: PR:Q9P7Z3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methyltransferase-like protein 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02530","PANTHER:PTHR12843:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-lysine N-methyltransferase efm4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.14c","secondary_identifiers":["UniProtKB:Q9P7Z3"],"synonyms":[{"name":"Spom972h-METTL10","type":"exact"},{"name":"elongation factor methyltransferase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"secretion and early endocytosis protein 1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7Z3"}


id: MONDO:0011224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monomelic amyotrophy (MA) is a rare benign lower motor neuron disorder characterized by muscular weakness and wasting in the distal upper extremities during adolescence followed by a spontaneous halt in progression and a stabilization of symptoms.","definition_xrefs":["Orphanet:65684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired motor neuron disease","termid":"MONDO:0020129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"monomelic amyotrophy","secondary_identifiers":["MEDGEN:356265","MESH:C538253","UMLS:C1865384","EFO:1001989","GARD:9697","icd11.foundation:2090347823","MedDRA:10069681","OMIM:602440"],"synonyms":[{"name":"Hirayama disease","type":"exact"},{"name":"JMADUE","type":"exact"},{"name":"amyotrophy, monomelic","type":"related"},{"name":"benign focal amyotrophy","type":"exact"},{"name":"juvenile muscular atrophy of distal upper extremity","type":"exact"},{"name":"juvenile muscular atrophy of the distal upper limb","type":"exact"},{"name":"spinal muscular atrophy juvenile nonprogressive","type":"related"},{"name":"spinal muscular atrophy, juvenile, nonprogressive","type":"related"}],"termid":"MONDO:0011224","xrefs":{"Monarch":{"xref_id":"0011224"}}}


id: MONDO:0010075
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87070],"is_not":false,"summary":null,"term":"MONDO:0010075"}]},"cv_name":"mondo","definition":"Any spondyloepimetaphyseal dysplasia with joint laxity in which the cause of the disease is a mutation in the B3GALT6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia with joint laxity","termid":"MONDO:0019675"},{"relation_name":"is_a","term_name":"B3GALT6-congenital disorder of glycosylation","termid":"MONDO:0100586"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia with joint laxity, type 1, with or without fractures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4017377","OMIM:271640","MEDGEN:865814","DOID:0112198","Orphanet:642099"],"synonyms":[{"name":"B3GALT6 spondyloepimetaphyseal dysplasia with joint laxity","type":"exact"},{"name":"SEMDJL","type":"broad"},{"name":"SEMDJL1","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with JOINT laxity, type 1, with or without fractures","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity caused by mutation in B3GALT6","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity, Beighton type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity, type 1, with or without fractures","type":"exact"}],"termid":"MONDO:0010075","terms_by_termid":{"MONDO:0010075":null},"xrefs":{"Monarch":{"xref_id":"0010075"}}}


id: GO:0019927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to tryptophyl quinone to form 4'-(S-L-cysteinyl)-L-tryptophyl quinone, a cofactor found at the active site of amine dehydrogenase.","definition_xrefs":["PDB:1JJU","PMID:11555656","RESID:AA0313","PMID:11717396"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 4'-(S-L-cysteinyl)-L-tryptophyl quinone (obsolete GO:0019927)","termid":"GO:0019927"}


id: PBO:0001933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINc domain","termid":"PBO:0001933"}


id: PR:O42873
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdc201 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate decarboxylase C3G9.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.11c","synonyms":[{"name":"Spom972h-pdc201","type":"exact"}],"termid":"PR:O42873"}


id: PBO:0046454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 like 2","termid":"PBO:0046454"}


id: PBO:0000840
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5","termid":"PBO:0000840"}


id: PBO:0055140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2559","termid":"PBO:0055140"}


id: MONDO:0018594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Secondary polyarteritis nodosa (PAN) is a rare serious form of PAN characterized by vasculitis in a background of viral infection, primarily with hepatitis B virus (HBV).","definition_xrefs":["Orphanet:439746"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyarteritis nodosa","termid":"MONDO:0019170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary polyarteritis nodosa","secondary_identifiers":["UMLS:C5680050","GARD:21831","MEDGEN:1843373"],"synonyms":[{"name":"Secondary PAN","type":"exact"},{"name":"secondary PAN","type":"exact"},{"name":"secondary periarteritis nodosa","type":"exact"}],"termid":"MONDO:0018594","xrefs":{"Monarch":{"xref_id":"0018594"}}}


id: GO:0005005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a transmembrane ephrin to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:9530499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ephrin receptor activity","termid":"GO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0140096","GO:0003824","GO:0038023","GO:0003674","GO:0016740","GO:0004672"],"is_obsolete":false,"name":"transmembrane-ephrin receptor activity","synonyms":[{"name":"transmembrane-Eph receptor activity","type":"exact"}],"termid":"GO:0005005"}


id: GO:1902088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any plant-type cell wall loosening that is involved in abscission.","definition_xrefs":["PMID:23479623","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall loosening","termid":"GO:0009828"},{"relation_name":"is_a","term_name":"cell wall modification involved in abscission","termid":"GO:0009830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"plant-type cell wall loosening involved in abscission","synonyms":[{"name":"cellulose and pectin-containing cell wall loosening involved in abscission","type":"exact"}],"termid":"GO:1902088"}


id: FYECO:0000078
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[119570,119582],"is_not":false,"summary":null,"term":"FYECO:0000078"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which hydrogen peroxide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"name":"+ H2O2","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266","SJAG_02592"],"single_locus_genotype_uniquenames":["atf1delta","sty1delta"],"synonyms":[{"name":"hydrogen peroxide added","type":"exact"}],"termid":"FYECO:0000078","terms_by_termid":{"FYECO:0000078":null,"FYPO_EXT:0000001":null}}


id: GO:0061654
data:
  {"annotated_genes":["SJAG_01018"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118796],"is_not":false,"summary":null,"term":"GO:0061654"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of NEDD8 from one protein to another via the reaction X-NEDD8 + Y = Y-NEDD8 + X, where both the X-NEDD8 and Y-NEDD8 linkages are thioester bonds between the C-terminal amino acid of NEDD8 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NEDD8 transferase activity","termid":"GO:0019788"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0019787","GO:0003674","GO:0016746","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"NEDD8 conjugating enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.2.34"],"synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061654","terms_by_termid":{"GO:0061654":null}}


id: GO:0050972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in echolocation in which a mechanical stimulus is received and converted into a molecular signal. The stimulus is in the form of a reflected sound wave (an echo), which the organism uses to determine the distance to the object that reflected the sound wave.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"echolocation","termid":"GO:0050959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in echolocation","synonyms":[{"name":"echolocation, detection of mechanical stimulus","type":"exact"},{"name":"echolocation, sensory detection of mechanical stimulus","type":"exact"},{"name":"echolocation, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during echolocation","type":"exact"},{"name":"sensory transduction of mechanical stimulus during echolocation","type":"exact"}],"termid":"GO:0050972"}


id: GO:1904023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucose catabolic process to lactate via pyruvate.","definition_xrefs":["PMID:20935145","GO_REF:0000058","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose metabolic process","termid":"GO:0010906"},{"relation_name":"is_a","term_name":"regulation of fermentation","termid":"GO:0043465"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"glucose catabolic process to lactate via pyruvate","termid":"GO:0019661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of glucose catabolic process to lactate via pyruvate","synonyms":[{"name":"regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"regulation of homofermentation","type":"exact"},{"name":"regulation of homofermentative lactate fermentation","type":"exact"},{"name":"regulation of homofermentative pathway","type":"exact"},{"name":"regulation of homolactate fermentation","type":"exact"},{"name":"regulation of homolactic fermentation","type":"exact"}],"termid":"GO:1904023"}


id: MONDO:0008911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytoid cardiomyopathy","termid":"MONDO:0010771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005267","MONDO:0005066"],"is_obsolete":false,"name":"cardiac lipidosis, familial","secondary_identifiers":["MEDGEN:395234","OMIM:212080","GARD:15148","UMLS:C1859332","MESH:C565884"],"synonyms":[{"name":"cardiac lipidosis, familial","type":"exact"}],"termid":"MONDO:0008911","xrefs":{"Monarch":{"xref_id":"0008911"}}}


id: GO:0160039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a channel that opens when the biogenic amine serotonin has been bound by the channel complex or one of its constituent parts. Serotonin (5-hydroxytryptamine) is a neurotransmitter and hormone found in vertebrates and invertebrates.","definition_xrefs":["PMID:11100728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"},{"relation_name":"is_a","term_name":"serotonin receptor activity","termid":"GO:0099589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215","GO:0038023"],"is_obsolete":false,"name":"serotonin-gated chloride channel activity","secondary_identifiers":["TC:1.A.9","Wikipedia:Ligand-gated_ion_channel"],"termid":"GO:0160039"}


id: PBO:0091504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric lncRNA nam5","termid":"PBO:0091504"}


id: PBO:0089831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthase","termid":"PBO:0089831"}


id: MOD:00898
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(sn-1-2-oleoyl-3-palmitoyl-glycerol)cysteine.","definition_xrefs":["Unimod:377","PubMed:10896212","PubMed:4575979","RESID:AA0107#var","PubMed:9056182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-diacylglycerol-L-cysteine","termid":"MOD:00116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"},{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:01155","MOD:00905"],"is_obsolete":false,"name":"S-(sn-1-2-oleoyl-3-palmitoyl-glycerol)cysteine","synonyms":[{"name":"Diacylglycerol","type":"related"},{"name":"diacylglycerol","type":"related"}],"termid":"MOD:00898"}


id: GO:0036092
data:
  {"annotated_genes":["SJAG_04545","SJAG_00063","SJAG_00114","SJAG_02289"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61685,61837,63369,71814],"is_not":false,"summary":null,"term":"GO:0036092"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylinositol-3-phosphate, a phosphatidylinositol monophosphate carrying the phosphate group at the 3-position.","definition_xrefs":["GOC:vw","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate biosynthetic process","termid":"GO:0046854"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_00114":null,"SJAG_02289":null,"SJAG_04545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylinositol-3-phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000108":null},"synonyms":[{"name":"PI(3)P biosynthesis","type":"exact"},{"name":"PtdIns3P biosynthesis","type":"exact"},{"name":"phosphatidylinositol-3-phosphate anabolism","type":"exact"},{"name":"phosphatidylinositol-3-phosphate biosynthesis","type":"exact"},{"name":"phosphatidylinositol-3-phosphate formation","type":"exact"},{"name":"phosphatidylinositol-3-phosphate synthesis","type":"exact"}],"termid":"GO:0036092","terms_by_termid":{"GO:0036092":null}}


id: PBO:0084961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myo-inositol transporter; member of the sugar transporter superfamily; expression is repressed by inositol and choline via Opi1p and derepressed via Ino2p and Ino4p; relative distribution to the vacuole increases upon DNA replication stress; ITR1 has a paralog, ITR2, that arose from the whole genome duplication","termid":"PBO:0084961"}


id: PR:O60181
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3,4-dihydroxy-2-butanone 4-phosphate synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3,4-dihydroxy-2-butanone 4-phosphate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.06c","secondary_identifiers":["UniProtKB:O60181"],"synonyms":[{"name":"DHBP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ribB","type":"exact"}],"termid":"PR:O60181"}


id: MONDO:0014902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nasopharyngeal carcinoma in which the cause of the disease is a mutation in the MST1R gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasopharyngeal carcinoma, susceptibility to, 3","secondary_identifiers":["MEDGEN:934696","OMIM:617075","UMLS:C4310729"],"synonyms":[{"name":"MST1R nasopharyngeal carcinoma","type":"exact"},{"name":"NPCA3","type":"exact"},{"name":"nasopharyngeal carcinoma caused by mutation in MST1R","type":"exact"},{"name":"nasopharyngeal carcinoma, susceptibility to, 3","type":"exact"},{"name":"nasopharyngeal carcinoma, susceptibility to, 3; NPCA3","type":"exact"},{"name":"nasopharyngeal carcinoma, susceptibility to, type 3","type":"exact"},{"name":"susceptibility to nasopharyngeal carcinoma 3","type":"related"}],"termid":"MONDO:0014902","xrefs":{"Monarch":{"xref_id":"0014902"}}}


id: PBO:0017737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-activated protein kinase gamma subunit cbs2","termid":"PBO:0017737"}


id: GO:0001301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any chromatin organization process that occurs during the lifespan of the cell that results in changes in chromatin structure. Such changes may lead to gene dysregulation and ultimately to a loss in cell homeostasis, bringing about an aging phenotype.","definition_xrefs":["GOC:jh","PMID:12044938","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete progressive alteration of chromatin involved in cell aging (obsolete GO:0001301)","synonyms":[{"name":"age-dependent accumulation of genetic damage","type":"related"},{"name":"progressive alteration of chromatin during cell ageing","type":"exact"},{"name":"progressive alteration of chromatin during cell aging","type":"related"}],"termid":"GO:0001301"}


id: PBO:0004952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper amine oxidase-like protein Cao2","termid":"PBO:0004952"}


id: PBO:0038439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylacetamide deacetylase pseudogene 1","termid":"PBO:0038439"}


id: MOD:01005
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-butylsulfenyl","synonyms":[{"name":"StBu","type":"exact"}],"termid":"MOD:01005"}


id: MONDO:0008930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 1","secondary_identifiers":["UMLS:C1859310","OMIM:212750","MEDGEN:395227"],"synonyms":[{"name":"CELIAC1","type":"related"},{"name":"celiac disease, susceptibility to","type":"exact"},{"name":"celiac disease, susceptibility to, 1","type":"exact"},{"name":"celiac disease, susceptibility to, type 1","type":"exact"},{"name":"celiac sprue, susceptibility to, 1","type":"related"},{"name":"coeliac disease, susceptibility to","type":"exact"},{"name":"coeliac disease, susceptibility to, type 1","type":"exact"},{"name":"coeliac sprue, susceptibility to, 1","type":"related"},{"name":"gluten-sensitive enteropathy, susceptibility to, 1","type":"related"},{"name":"susceptibility to celiac disease 1","type":"related"},{"name":"susceptibility to coeliac disease 1","type":"related"}],"termid":"MONDO:0008930","xrefs":{"Monarch":{"xref_id":"0008930"}}}


id: PBO:0044149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTCF divergent transcript","termid":"PBO:0044149"}


id: PBO:0000703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR family","termid":"PBO:0000703"}


id: PBO:0085465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predominantly nucleolar DEAH-box ATP-dependent RNA helicase; required for 18S rRNA synthesis","termid":"PBO:0085465"}


id: PBO:0058553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6132","termid":"PBO:0058553"}


id: GO:0010564
data:
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process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:32915139":null},"termid":"GO:0010564","terms_by_termid":{"GO:0001100":null,"GO:0007063":null,"GO:0007088":null,"GO:0007089":null,"GO:0007091":null,"GO:0007094":null,"GO:0007095":null,"GO:0007096":null,"GO:0010389":null,"GO:0010520":null,"GO:0010845":null,"GO:0010846":null,"GO:0010971":null,"GO:0010972":null,"GO:0031030":null,"GO:0031031":null,"GO:0031536":null,"GO:0031568":null,"GO:0031569":null,"GO:0031571":null,"GO:0031573":null,"GO:0031991":null,"GO:0032215":null,"GO:0032888":null,"GO:0032955":null,"GO:0033314":null,"GO:0033315":null,"GO:0033316":null,"GO:0034307":null,"GO:0040020":null,"GO:0044773":null,"GO:0044778":null,"GO:0044878":null,"GO:0045128":null,"GO:0045842":null,"GO:0045875":null,"GO:0045876":null,"GO:0051598":null,"GO:0060236":null,"GO:0062123":null,"GO:0062209":null,"GO:0070317":null,"GO:0075296":null,"GO:0075297":null,"GO:0090006":null,"GO:0090267":null,"GO:0110031":null,"GO:0110032":null,"GO:0110044":null,"GO:0110045":null,"GO:0110161":null,"GO:0110162":null,"GO:0120292":null,"GO:0120306":null,"GO:0140281":null,"GO:0140429":null,"GO:0140499":null,"GO:0140648":null,"GO:0140748":null,"GO:1900087":null,"GO:1901673":null,"GO:1901970":null,"GO:1901987":null,"GO:1901993":null,"GO:1902103":null,"GO:1902412":null,"GO:1902413":null,"GO:1902424":null,"GO:1902425":null,"GO:1902426":null,"GO:1902472":null,"GO:1902845":null,"GO:1902846":null,"GO:1903023":null,"GO:1903024":null,"GO:1903380":null,"GO:1903464":null,"GO:1903465":null,"GO:1903467":null,"GO:1903468":null,"GO:1903472":null,"GO:1903473":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1904514":null,"GO:1904967":null,"GO:1905191":null,"GO:1905263":null,"GO:1905287":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1905557":null,"GO:1905757":null,"GO:1905758":null,"GO:1905824":null,"GO:1990949":null,"GO:1990950":null,"GO:2000134":null,"GO:2000432":null,"GO:2000816":null}}


id: PBO:0039446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and IBR domain containing 1","termid":"PBO:0039446"}


id: GO:0070401
data:
  {"annotated_genes":["SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58997],"is_not":false,"summary":null,"term":"GO:0070401"}]},"cv_name":"molecular_function","definition":"Binding to the oxidized form, NADP+, of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"NADP binding","termid":"GO:0050661"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"NADP+ binding","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"NADP (oxidized) binding","type":"exact"},{"name":"NADP binding","type":"related"},{"name":"oxidized NADP binding","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate binding","type":"exact"}],"termid":"GO:0070401","terms_by_termid":{"GO:0070401":null}}


id: PBO:0044438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 3","termid":"PBO:0044438"}


id: PBO:0029224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_homologous_chromosome_pairing","termid":"PBO:0029224"}


id: PR:Q9C1X1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pwp2 gene.","definition_xrefs":["UniProtKB:Q9C1X1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodic tryptophan protein 2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.04c","synonyms":[{"name":"Spom972h-pwp2","type":"exact"}],"termid":"PR:Q9C1X1"}


id: PBO:0044534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol lipase alpha","termid":"PBO:0044534"}


id: PBO:0041854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 2","termid":"PBO:0041854"}


id: GO:0043803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: demethylspheroidene + S-adenosyl-L-methionine = H+ + S-adenosyl-L-homocysteine + spheroidene.","definition_xrefs":["RHEA:30903","PMID:12770713","PMID:12664193","PMID:7358679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"hydroxyneurosporene-O-methyltransferase activity","secondary_identifiers":["EC:2.1.1.210"],"synonyms":[{"name":"1-HO-carotenoid methylase","type":"related"},{"name":"1-hydroxycarotenoid O-methylase","type":"related"},{"name":"1-hydroxycarotenoid methylase","type":"related"},{"name":"demethylspheroidene O-methyltransferase","type":"related"}],"termid":"GO:0043803"}


id: PBO:0064106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"praja ring finger ubiquitin ligase 2","termid":"PBO:0064106"}


id: GO:0100003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates sodium ion transport.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sodium ion transport by transcription from RNA polymerase II promoter (obsolete GO:0100003)","termid":"GO:0100003"}


id: GO:1900146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of a nodal signaling pathway, where the nodal signaling pathway is involved in determination of left/right asymmetry.","definition_xrefs":["GOC:BHF","GOC:signaling","GOC:vk","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of nodal signaling pathway involved in determination of left/right asymmetry (obsolete GO:1900146)","synonyms":[{"name":"down regulation of nodal signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"down-regulation of nodal signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"downregulation of nodal signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"inhibition of nodal signaling pathway involved in determination of left/right asymmetry","type":"narrow"},{"name":"negative regulation of nodal signalling pathway involved in determination of left/right asymmetry","type":"exact"}],"termid":"GO:1900146"}


id: MONDO:0011823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Developmental malformations-deafness-dystonia syndrome is characterized by the association of midline malformations, sensory hearing loss, and a delayed-onset generalized dystonia syndrome.","definition_xrefs":["Orphanet:79107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441","MONDO:0002320"],"is_obsolete":false,"name":"developmental malformations-deafness-dystonia syndrome","secondary_identifiers":["OMIM:607371","GARD:9818","UMLS:C5848323","MESH:C537704","MEDGEN:1848671"],"synonyms":[{"name":"DJO","type":"related"},{"name":"dystonia, juvenile-onset","type":"related"},{"name":"juvenile-onset dystonia","type":"related"}],"termid":"MONDO:0011823","xrefs":{"Monarch":{"xref_id":"0011823"}}}


id: PBO:0042819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide transporter 1","termid":"PBO:0042819"}


id: PBO:0077884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocated promoter region, nuclear basket protein","termid":"PBO:0077884"}


id: PBO:0060948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFIB antisense RNA 1","termid":"PBO:0060948"}


id: PBO:0054679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2087","termid":"PBO:0054679"}


id: GO:0034837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-mercaptobenzothiazole-cis-6,7-dihydrodiol = 6,7-dihydroxy-2-mercaptobenzothiazole + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-mercaptobenzothiazole-cis-6,7-dihydrodiol dehydrogenase activity (obsolete GO:0034837)","termid":"GO:0034837"}


id: MONDO:0021019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked recessive ocular albinism (XLOA) is a rare disorder characterized by ocular hypopigmentation, foveal hypoplasia, nystagmus, photodysphoria, and reduced visual acuity in males.","definition_xrefs":["Orphanet:54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular albinism","termid":"MONDO:0017304"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"},{"relation_name":"is_a","term_name":"albinism","termid":"MONDO:0043209"},{"relation_name":"is_a","term_name":"GPR143-related foveal hypoplasia","termid":"MONDO:0700230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"X-linked recessive ocular albinism","secondary_identifiers":["MEDGEN:90991","icd11.foundation:846740259","NCIT:C118785","ICD9:270.2","MESH:C537863","SCTID:78642008","GARD:8471","OMIM:300500","UMLS:C0342684"],"synonyms":[{"name":"Nettleship-Falls syndrome","type":"exact"},{"name":"Nettleship-Falls type ocular albinism","type":"related"},{"name":"OA1","type":"exact"},{"name":"X-linked ocular albinism","type":"related"},{"name":"XLOA","type":"exact"},{"name":"albinism, ocular, type 1","type":"related"},{"name":"albinism, ocular, type I","type":"related"},{"name":"ocular albinism type 1","type":"exact"},{"name":"ocular albinism, Nettleship-Falls type","type":"exact"},{"name":"ocular albinism, type I, Nettleship-Falls type","type":"exact"}],"termid":"MONDO:0021019","xrefs":{"Monarch":{"xref_id":"0021019"}}}


id: GO:1901109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of granaticin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"granaticin metabolic process","termid":"GO:1901107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"granaticin biosynthetic process","synonyms":[{"name":"granaticin anabolism","type":"exact"},{"name":"granaticin biosynthesis","type":"exact"},{"name":"granaticin formation","type":"exact"},{"name":"granaticin synthesis","type":"exact"}],"termid":"GO:1901109"}


id: PBO:0054928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2342","termid":"PBO:0054928"}


id: PBO:0051282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-17","termid":"PBO:0051282"}


id: GO:1902188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of viral release from host cell.","definition_xrefs":["PMID:18305167","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of viral release from host cell (obsolete GO:1902188)","synonyms":[{"name":"activation of release of virus from host","type":"exact"},{"name":"activation of viral exit","type":"exact"},{"name":"activation of viral release","type":"exact"},{"name":"activation of viral release from host cell","type":"narrow"},{"name":"activation of viral shedding","type":"exact"},{"name":"positive regulation of release of virus from host","type":"exact"},{"name":"positive regulation of viral exit","type":"exact"},{"name":"positive regulation of viral release","type":"exact"},{"name":"positive regulation of viral shedding","type":"exact"},{"name":"up regulation of release of virus from host","type":"exact"},{"name":"up regulation of viral exit","type":"exact"},{"name":"up regulation of viral release","type":"exact"},{"name":"up regulation of viral release from host cell","type":"exact"},{"name":"up regulation of viral shedding","type":"exact"},{"name":"up-regulation of release of virus from host","type":"exact"},{"name":"up-regulation of viral exit","type":"exact"},{"name":"up-regulation of viral release","type":"exact"},{"name":"up-regulation of viral release from host cell","type":"exact"},{"name":"up-regulation of viral shedding","type":"exact"},{"name":"upregulation of release of virus from host","type":"exact"},{"name":"upregulation of viral exit","type":"exact"},{"name":"upregulation of viral release","type":"exact"},{"name":"upregulation of viral release from host cell","type":"exact"},{"name":"upregulation of viral shedding","type":"exact"}],"termid":"GO:1902188"}


id: PBO:0050737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1","termid":"PBO:0050737"}


id: PBO:0059527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded 16S rRNA","termid":"PBO:0059527"}


id: PBO:0047392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 32","termid":"PBO:0047392"}


id: PBO:0056041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukotriene C4 synthase","termid":"PBO:0056041"}


id: SO:0001056
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region that modulates splicing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing_regulatory_region","synonyms":[{"name":"splicing regulatory region","type":"exact"}],"termid":"SO:0001056"}


id: PBO:0070087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 1","termid":"PBO:0070087"}


id: FYPO:0001438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing tetracycline.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on tetracycline","synonyms":[{"name":"normal cell population growth in presence of tetracycline","type":"exact"},{"name":"normal cell population growth on tetracycline","type":"exact"},{"name":"normal cellular response to tetracycline","type":"related"},{"name":"normal vegetative cell population growth on tetracycline","type":"exact"}],"termid":"FYPO:0001438"}


id: PBO:0086175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the negative regulation by ammonia of Gap1p; Gap1p is a general amino acid permease","termid":"PBO:0086175"}


id: PBO:0078922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 1-1","termid":"PBO:0078922"}


id: PBO:0068058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 363","termid":"PBO:0068058"}


id: PBO:0086188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to bacterial secreted DfsB proteins; null mutant displays increased levels of spontaneous Rad52p foci; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus","termid":"PBO:0086188"}


id: GO:0015752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-ribose is transported across a lipid bilayer, from one side of a membrane to the other. As beta-D-ribofuranose, D-ribose forms the glycose group of all ribonucleosides, ribonucleotides and ribonucleic acids, and also of ribose phosphates, various glycosides, some coenzymes and some forms of vitamin B12.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transport","termid":"GO:0015750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"D-ribose transmembrane transport","synonyms":[{"name":"D-ribose transport","type":"related"}],"termid":"GO:0015752"}


id: GO:0015358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete amino acid/choline transmembrane transporter activity (obsolete GO:0015358)","synonyms":[{"name":"amino acid/choline transmembrane transporter activity","type":"exact"}],"termid":"GO:0015358"}


id: MONDO:0012860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary thrombophilia due to congenital protein C deficiency","termid":"MONDO:0019145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombophilia due to protein C deficiency, autosomal recessive","secondary_identifiers":["MESH:C567353","OMIM:612304","DOID:0111904","GARD:13041","UMLS:C2676759","MEDGEN:394120"],"synonyms":[{"name":"Proc deficiency, autosomal recessive","type":"related"},{"name":"Protein C deficiency, autosomal recessive","type":"related"},{"name":"THPH4","type":"related"},{"name":"autosomal recessive hereditary thrombophilia due to protein C deficiency","type":"related"},{"name":"autosomal recessive protein C deficiency","type":"related"},{"name":"hereditary thrombophilia due to PC deficiency","type":"related"},{"name":"hereditary thrombophilia due to congenital protein C deficiency","type":"related"},{"name":"thrombophilia 3 due to protein C deficiency, autosomal recessive","type":"exact"},{"name":"thrombophilia due to PROTEIN C deficiency, autosomal recessive","type":"related"},{"name":"thrombophilia due to protein C deficiency, autosomal recessive","type":"exact"}],"termid":"MONDO:0012860","xrefs":{"Monarch":{"xref_id":"0012860"}}}


id: MONDO:0014283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the TNC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 56","secondary_identifiers":["GARD:18137","DOID:0110581","MEDGEN:816500","OMIM:615629","UMLS:C3810170"],"synonyms":[{"name":"DFNA56","type":"narrow"},{"name":"TNC autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 56","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 56","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in TNC","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 56","type":"narrow"},{"name":"deafness, autosomal dominant 56","type":"narrow"},{"name":"deafness, autosomal dominant type 56","type":"narrow"}],"termid":"MONDO:0014283","xrefs":{"Monarch":{"xref_id":"0014283"}}}


id: MONDO:0021948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"extrapulmonary tuberculosis","termid":"MONDO:0000368"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous tuberculosis","secondary_identifiers":["SCTID:66986005","UMLS:C0041309","icd11.foundation:625292625","MEDGEN:22515"],"synonyms":[{"name":"Cutaneous Tuberculoses","type":"related"},{"name":"Cutaneous Tuberculosis","type":"related"},{"name":"Cutaneous tuberculosis","type":"related"},{"name":"Skin Tuberculoses","type":"related"},{"name":"Skin Tuberculosis","type":"related"},{"name":"Tuberculoderma","type":"related"},{"name":"Tuberculoses, Cutaneous","type":"related"},{"name":"Tuberculoses, Skin","type":"related"},{"name":"Tuberculosis cutis","type":"related"},{"name":"Tuberculosis of skin","type":"related"},{"name":"Tuberculosis, Cutaneous","type":"related"},{"name":"Tuberculosis, Skin","type":"related"},{"name":"cutaneous tuberculosis","type":"exact"},{"name":"tuberculoderma","type":"related"},{"name":"tuberculosis cutis","type":"related"},{"name":"tuberculosis of skin","type":"exact"}],"termid":"MONDO:0021948","xrefs":{"Monarch":{"xref_id":"0021948"}}}


id: PBO:0050294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine N-methyltransferase","termid":"PBO:0050294"}


id: FYPO:0000120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the mitotic or meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"}],"gene_count":0,"genotype_count":0,"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0002399","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal spindle","secondary_identifiers":["FYPO:0000367"],"synonyms":[{"name":"spindle defects","type":"exact"}],"termid":"FYPO:0000120"}


id: PBO:0057895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3198-2","termid":"PBO:0057895"}


id: MONDO:0800136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-severe combined immunodeficiency caused by a deficiency in the COPG1 gene.","definition_xrefs":["PMID:33529166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"non-severe combined immunodeficiency due to COPG1 deficiency","termid":"MONDO:0800136","xrefs":{"Monarch":{"xref_id":"0800136"}}}


id: FYPO:0005903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction begins, but stops before the ring completely constricts and is disassembled.","definition_xrefs":["PMID:19570908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000032","FYPO:0001985","FYPO:0004803","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"incomplete actomyosin contractile ring contraction","synonyms":[{"name":"incomplete actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"incomplete actomyosin contractile ring contraction during vegetative growth","type":"exact"}],"termid":"FYPO:0005903"}


id: PBO:0085183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of three alternate beta-subunits of the Snf1p kinase complex; may confer substrate specificity; vacuolar protein containing KIS (Kinase-Interacting Sequence) and ASC (Association with Snf1 kinase Complex) domains involved in protein interactions","termid":"PBO:0085183"}


id: GO:0045334
data:
  {"annotated_genes":["SJAG_00800","SJAG_01167","SJAG_00104","SJAG_02805"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74706,58348,78441,108699],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"A clathrin-coated, membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle","termid":"GO:0030136"},{"relation_name":"is_a","term_name":"endocytic vesicle","termid":"GO:0030139"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_02805":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"clathrin-coated endocytic vesicle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1243595998"],"termid":"GO:0045334","terms_by_termid":{"GO:0030122":null}}


id: GO:0044764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that is carried out at the cellular level which involves another organism of the same or different species.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism cellular process (obsolete GO:0044764)","termid":"GO:0044764"}


id: GO:0055044
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The interconnected cell membranes and intracellular regions of a plant. The interconnections occur via the plasmodesmata.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"symplast","secondary_identifiers":["Wikipedia:Symplast"],"termid":"GO:0055044"}


id: MONDO:0007604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Femoral-facial syndrome is characterized by predominant femoral hypoplasia (bilateral or unilateral) and unusual facies.","definition_xrefs":["Orphanet:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"femoral-facial syndrome","secondary_identifiers":["icd11.foundation:505576809","SCTID:13280000","GARD:61","MEDGEN:120523","MESH:C537916","ICD9:759.89","UMLS:C0265263","OMIM:134780"],"synonyms":[{"name":"FFS","type":"exact"},{"name":"FHUFS","type":"exact"},{"name":"Femoral Facial Syndrome","type":"exact"},{"name":"femoral dysgenesis, bilateral","type":"related"},{"name":"femoral facial syndrome","type":"exact"},{"name":"femoral hypoplasia unusual facies syndrome","type":"related"},{"name":"femoral hypoplasia-unusual facies syndrome","type":"exact"},{"name":"femoral-facial syndrome","type":"exact"}],"termid":"MONDO:0007604","xrefs":{"Monarch":{"xref_id":"0007604"}}}


id: MONDO:1011467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis, non-human animal","termid":"MONDO:1011415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis, dog","secondary_identifiers":["OMIA:000037-9615"],"termid":"MONDO:1011467","xrefs":{"Monarch":{"xref_id":"1011467"}}}


id: PBO:0063772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 3","termid":"PBO:0063772"}


id: GO:0002496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein contributing to antigen processing and presentation.","definition_xrefs":["PMID:15771591","ISBN:0781735149","PMID:15224092","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}


id: GO:0016912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete SAP kinase 5 activity (obsolete GO:0016912)","synonyms":[{"name":"SAP kinase 5 activity","type":"exact"},{"name":"SAPK5","type":"exact"}],"termid":"GO:0016912"}


id: MONDO:0008031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any facioscapulohumeral muscular dystrophy in which the cause of the disease is a mutation in the SMCHD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facioscapulohumeral muscular dystrophy","termid":"MONDO:0001347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"facioscapulohumeral muscular dystrophy 2","secondary_identifiers":["MESH:C563557","UMLS:C1834671","MEDGEN:320405","DOID:0111193","GARD:15088","NCIT:C172705","OMIM:158901"],"synonyms":[{"name":"FSHD2","type":"related"},{"name":"Fshd2, digenic","type":"related"},{"name":"SMCHD1 facioscapulohumeral muscular dystrophy","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy 2","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy 2, digenic","type":"related"},{"name":"facioscapulohumeral muscular dystrophy caused by mutation in SMCHD1","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy type 2","type":"exact"},{"name":"fascioscapulohumeral muscular dystrophy 2, digenic, digenic dominant","type":"exact"},{"name":"muscular dystrophy, facioscapulohumeral, type 1B","type":"related"},{"name":"muscular dystrophy, facioscapulohumeral, type 2","type":"related"}],"termid":"MONDO:0008031","xrefs":{"Monarch":{"xref_id":"0008031"}}}


id: PBO:0049630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 33","termid":"PBO:0049630"}


id: PBO:0049919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes related family bHLH transcription factor with YRPW motif like","termid":"PBO:0049919"}


id: GO:0045825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of intermediate filament polymerization and/or depolymerization.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of intermediate filament polymerization and/or depolymerization (obsolete GO:0045825)","synonyms":[{"name":"negative regulation of intermediate filament polymerization and/or depolymerization","type":"exact"}],"termid":"GO:0045825"}


id: MONDO:0005705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the biliary passages with clonorchis sinensis, also called Opisthorchis sinensis. It may lead to inflammation of the biliary tract, proliferation of biliary epithelium, progressive portal fibrosis, and sometimes bile duct carcinoma. Extension to the liver may lead to fatty changes and cirrhosis. (From Dorland, 27th ed)","definition_xrefs":["MESH:D003003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clonorchiasis","secondary_identifiers":["ICD9:121.1","SCTID:11938002","Orphanet:658917","UMLS:C0009021","EFO:0007210","ICD10CM:B66.1","MEDGEN:3119","DOID:13767","icd11.foundation:918986134"],"synonyms":[{"name":"Oriental liver fluke disease","type":"exact"}],"termid":"MONDO:0005705","xrefs":{"Monarch":{"xref_id":"0005705"}}}


id: MONDO:1010849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease in which there is a buildup of glycogen due to a lack of the enzyme alpha-glucosidase in Japanese quail.","definition_xrefs":["OMIA:000419-93934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disease II, Japanese quail","termid":"MONDO:1010849","xrefs":{"Monarch":{"xref_id":"1010849"}}}


id: MONDO:0012942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lung cancer","termid":"MONDO:0008903"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung cancer susceptibility 3","secondary_identifiers":["OMIM:612571","MEDGEN:382615","UMLS:C2675497"],"synonyms":[{"name":"LNCR3","type":"exact"},{"name":"adenocarcinoma of lung, susceptibility to","type":"related"},{"name":"lung cancer susceptibility 3","type":"exact"}],"termid":"MONDO:0012942","xrefs":{"Monarch":{"xref_id":"0012942"}}}


id: FYPO:0007710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Ssb1 accumulates is lower than normal.","definition_xrefs":["PMID:33723569","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased number of Ssb1 foci","synonyms":[{"name":"decreased number of RPA foci","type":"exact"},{"name":"decreased number of Rad11 foci","type":"exact"},{"name":"decreased number of Rpa1 foci","type":"exact"},{"name":"decreased number of Ssb1 foci during mitotic cell cycle","type":"related"},{"name":"decreased number of Ssb1 foci during vegetative growth","type":"exact"},{"name":"reduced number of Ssb1 foci","type":"exact"}],"termid":"FYPO:0007710"}


id: FYPO:0001054
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell enters mitosis when longer than wild type, and then septates to give rise to a cut phenotype. In a cut phenotype, a cell undergoes septation despite abnormal mitosis such that the septum physically divides the nucleus into two parts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"has_part","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000032","FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0000005","FYPO:0000631","FYPO:0000337","FYPO:0000004"],"is_obsolete":false,"name":"cut, elongated cell","synonyms":[{"name":"cut following delayed onset of mitosis","type":"exact"},{"name":"cut with mitotic catastrophe, elongated cell","type":"related"},{"name":"cut, elongated cell during mitotic cell cycle","type":"related"},{"name":"cut, elongated cell during vegetative growth","type":"exact"},{"name":"cut, long cell","type":"exact"},{"name":"elongated cut cell","type":"exact"},{"name":"mitotic catastrophe with cut, elongated cell","type":"related"},{"name":"septation following abnormal nuclear division, long cell","type":"exact"}],"termid":"FYPO:0001054"}


id: PBO:0050541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine phosphoribosyltransferase 1 pseudogene 2","termid":"PBO:0050541"}


id: FYPO:0002100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an 3'-5' DNA helicase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal 3'-5' DNA helicase activity","termid":"FYPO:0002100"}


id: MOD:01655
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 5-dimethylaminonaphthalene-1-sulfonyl chloride, dansyl chloride, to form an alpha-amino-Dansyl-derivatized residue.","definition_xrefs":["Unimod:139#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dansyl chloride derivatized residue","termid":"MOD:01653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino-Dansyl derivatized residue","synonyms":[{"name":"5-dimethylaminonaphthalene-1-sulfonyl","type":"related"},{"name":"Dansyl","type":"related"},{"name":"N2DansylRes","type":"exact"}],"termid":"MOD:01655"}


id: PBO:0043245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 5","termid":"PBO:0043245"}


id: GO:0031544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-proline + 2-oxoglutarate + O2 = peptidyl trans-3-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline dioxygenase activity","termid":"GO:0031543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491","GO:0140096"],"is_obsolete":false,"name":"peptidyl-proline 3-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-9630769"],"termid":"GO:0031544"}


id: MOD:00869
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-alanine.","definition_xrefs":["RESID:AA0001#ASP","PubMed:17138938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine residue","termid":"MOD:00010"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanine residue (Asp)","synonyms":[{"name":"(2S)-2-aminopropanoic acid","type":"exact"},{"name":"2-aminopropionic acid","type":"exact"},{"name":"2-azanylpropanoic acid","type":"exact"},{"name":"Asp(Ala)","type":"exact"},{"name":"L-alanine","type":"exact"},{"name":"MOD_RES Beta-decarboxylated aspartate","type":"exact"},{"name":"alpha-alanine","type":"exact"},{"name":"alpha-aminopropionic acid","type":"exact"}],"termid":"MOD:00869"}


id: PBO:0090465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c heme lyase Cyc3","termid":"PBO:0090465"}


id: PBO:0050288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNF1A antisense RNA 1","termid":"PBO:0050288"}


id: PBO:0041923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystathionine beta-synthase","termid":"PBO:0041923"}


id: PBO:0078008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor associated factor 7","termid":"PBO:0078008"}


id: MONDO:0013745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the TMEM237 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome with oculorenal defect","termid":"MONDO:0009480"},{"relation_name":"is_a","term_name":"Joubert syndrome with ocular defect","termid":"MONDO:0016364"},{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"Joubert syndrome 14","secondary_identifiers":["UMLS:C3280766","MEDGEN:482396","DOID:0110983","GARD:15801","OMIM:614424"],"synonyms":[{"name":"JBTS14","type":"exact"},{"name":"Joubert syndrome 14","type":"exact"},{"name":"Joubert syndrome caused by mutation in TMEM237","type":"exact"},{"name":"Joubert syndrome type 14","type":"exact"},{"name":"TMEM237 Joubert syndrome","type":"exact"}],"termid":"MONDO:0013745","xrefs":{"Monarch":{"xref_id":"0013745"}}}


id: PBO:0002768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noc2p-Noc3p complex subunit Noc2 family (predicted)","termid":"PBO:0002768"}


id: PBO:0065110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C epsilon","termid":"PBO:0065110"}


id: PBO:0043028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 3","termid":"PBO:0043028"}


id: GO:0106349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The posttranscriptional addition of methyl groups to specific residues in an snRNA molecule.","definition_xrefs":["PMID:21823225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methylation","termid":"GO:0001510"},{"relation_name":"is_a","term_name":"snRNA modification","termid":"GO:0040031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0008150","GO:0016073","GO:0010467"],"is_obsolete":false,"name":"snRNA methylation","termid":"GO:0106349"}


id: GO:0009383
data:
  {"annotated_genes":["SJAG_02417","SJAG_03877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79293,95953],"is_not":false,"summary":null,"term":"GO:0009383"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to cytosine to form 5-methylcytosine in small subunit ribosomal RNA.","definition_xrefs":["PMID:10026269","GOC:imk","PMID:18786544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-methyltransferase activity","termid":"GO:0008169"},{"relation_name":"is_a","term_name":"rRNA (cytosine) methyltransferase activity","termid":"GO:0016434"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02417":null,"SJAG_03877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"rRNA (cytosine-C5-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6793057","Reactome:R-HSA-6790944"],"synonyms":[{"name":"rRNA (cytosine-C5-967)-methyltransferase activity","type":"narrow"},{"name":"rRNA m5C967 methyltransferase activity","type":"narrow"}],"termid":"GO:0009383","terms_by_termid":{"GO:0009383":null}}


id: FYPO:0007079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initial release of duplicated spindle pole bodies that occurs as part of the second meiotic nuclear division, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal initial meiotic spindle pole body separation in meiosis II","synonyms":[{"name":"normal initial meiotic spindle pole body separation in second meiotic nuclear division","type":"exact"},{"name":"normal initial mitotic SPB separation in meiosis II","type":"exact"},{"name":"normal initial spindle pole body separation at meiosis II","type":"exact"}],"termid":"FYPO:0007079"}


id: PBO:0067531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 675, pseudogene","termid":"PBO:0067531"}


id: PBO:0056916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MINDY lysine 48 deubiquitinase 2","termid":"PBO:0056916"}


id: PBO:0056643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 4","termid":"PBO:0056643"}


id: GO:0034270
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is involved in the Cvt pathway. In budding yeast, the Cvt complex consists of multimers of preApe1p.","definition_xrefs":["GOC:rb","PMID:15659643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"Cvt complex","synonyms":[{"name":"cytoplasm to vacuole targeting complex","type":"exact"},{"name":"cytoplasm-to-vacuole targeting complex","type":"exact"}],"termid":"GO:0034270"}


id: PR:O59714
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3B8.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C3B8.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.06","synonyms":[{"name":"Spom972h-SPBC3B8.06","type":"exact"}],"termid":"PR:O59714"}


id: PBO:0089044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph3","termid":"PBO:0089044"}


id: MONDO:0009185
data:
  {"annotated_genes":["SJAG_04454"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85779],"is_not":false,"summary":null,"term":"MONDO:0009185"}]},"cv_name":"mondo","definition":"Kohlschütter-TC6nz syndrome (KTS) is a genetically heterogeneous autosomal recessive syndrome characterized by the triad of amelogenesis imperfect, infantile onset epilepsy, intellectual disability with or without regression and dementia.","definition_xrefs":["Orphanet:1946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"amelocerebrohypohidrotic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:98036","MESH:C537213","GARD:3128","OMIM:226750","SCTID:109478007","UMLS:C0406740","DOID:0111668"],"synonyms":[{"name":"KOHLSCHUTTER-Tonz syndrome","type":"related"},{"name":"KTZS","type":"related"},{"name":"Kohlschutter Tonz syndrome","type":"related"},{"name":"Kohlschutter syndrome","type":"related"},{"name":"Kohlschutter-Tonz syndrome","type":"exact"},{"name":"amelocerebrohypohidrotic syndrome","type":"exact"},{"name":"epilepsy and Yellow teeth","type":"related"},{"name":"epilepsy dementia amelogenesis imperfecta","type":"related"},{"name":"epilepsy, dementia, and amelogenesis imperfecta","type":"related"},{"name":"epilepsy-dementia-amelogenesis imperfecta syndrome","type":"exact"}],"termid":"MONDO:0009185","terms_by_termid":{"MONDO:0009185":null},"xrefs":{"Monarch":{"xref_id":"0009185"}}}


id: GO:0070204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + H+ + isochorismate = 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate + CO2.","definition_xrefs":["RHEA:25593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016744"],"is_obsolete":false,"name":"2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity","secondary_identifiers":["MetaCyc:2.5.1.64-RXN","KEGG_REACTION:R08165","EC:2.2.1.9"],"synonyms":[{"name":"MenD","type":"related"},{"name":"SEPHCHC synthase activity","type":"related"}],"termid":"GO:0070204"}


id: PBO:0068841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 79, pseudogene","termid":"PBO:0068841"}


id: PBO:0059813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 39","termid":"PBO:0059813"}


id: FYPO:0008336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the poly(A) tails of mRNA molecules is abolished.","definition_xrefs":["PMID:39333464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished mRNA poly(A) tail uridylation","termid":"FYPO:0008336"}


id: PBO:0035808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_stubby_multiseptate_vegetative_cell","termid":"PBO:0035808"}


id: MONDO:0800176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Local and/or systemic toxicity resulting from a bite from a black widow spider (Latrodectus species).","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"black widow spider envenomation","secondary_identifiers":["SCTID:217666004"],"synonyms":[{"name":"black widow envenomation","type":"exact"},{"name":"latrodectism","type":"exact"},{"name":"poisoning caused by black widow venom","type":"exact"},{"name":"poisoning due to black widow spider","type":"exact"},{"name":"toxic effect of venom of black widow","type":"exact"}],"termid":"MONDO:0800176","xrefs":{"Monarch":{"xref_id":"0800176"}}}


id: GO:0007265
data:
  {"annotated_genes":["SJAG_02379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72531],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0046580"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Ras subfamily relays a signal.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Ras protein signal transduction","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-167044","Reactome:R-HSA-1169092"],"synonyms":[{"name":"Ras mediated signal transduction","type":"exact"}],"termid":"GO:0007265","terms_by_termid":{"GO:0046580":null}}


id: MONDO:0013728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pregnancy loss, recurrent, susceptibility in which the cause of the disease is a mutation in the F2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy loss, recurrent, susceptibility","termid":"MONDO:0000144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy loss, recurrent, susceptibility to, 2","secondary_identifiers":["OMIM:614390","MEDGEN:482302","UMLS:C3280672"],"synonyms":[{"name":"F2 pregnancy loss, recurrent, susceptibility","type":"exact"},{"name":"RPRGL2","type":"related"},{"name":"pregnancy loss, recurrent, susceptibility caused by mutation in F2","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, 2","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, type 2","type":"exact"}],"termid":"MONDO:0013728","xrefs":{"Monarch":{"xref_id":"0013728"}}}


id: FYPO:0006192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid, has no septum, and has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"normal volume spheroid vegetative cell","termid":"FYPO:0000946"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000257","FYPO:0000002","FYPO:0000631","FYPO:0001312","FYPO:0001985","FYPO:0000032","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"normal volume aseptate spheroid vegetative cell","synonyms":[{"name":"normal volume aseptate rounded vegetative cell","type":"exact"}],"termid":"FYPO:0006192"}


