# terms

id: PR:Q96WV5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coatomer subunit alpha that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02555","PANTHER:PTHR19876:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.04","secondary_identifiers":["UniProtKB:Q96WV5"],"synonyms":[{"name":"Spom972h-COPA","type":"exact"},{"name":"alpha-COP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"alpha-coat protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q96WV5"}


id: PBO:0074437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 38","termid":"PBO:0074437"}


id: PBO:0070090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 4 pseudogene","termid":"PBO:0070090"}


id: GO:0018524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acetophenone + CO2 = H+ + benzoyl acetate.","definition_xrefs":["UM-BBD_reactionID:r0033"],"gene_count":0,"genotype_count":0,"name":"obsolete acetophenone carboxylase activity (obsolete GO:0018524)","termid":"GO:0018524"}


id: GO:0005010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with insulin-like growth factor receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016301","GO:0003824","GO:0003674","GO:0016740","GO:0038023","GO:0004672"],"is_obsolete":false,"name":"insulin-like growth factor receptor activity","synonyms":[{"name":"IGF receptor activity","type":"exact"},{"name":"IGF-activated receptor activity","type":"exact"},{"name":"insulin-like growth factor-activated receptor activity","type":"exact"}],"termid":"GO:0005010"}


id: MONDO:0021664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical aortic arch (obsolete MONDO:0021664)","termid":"MONDO:0021664","xrefs":{"Monarch":{"xref_id":"0021664"}}}


id: PBO:0052518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 31","termid":"PBO:0052518"}


id: GO:0010448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a vegetative meristem, a population of undifferentiated cells in a plant shoot which maintains a continuous balance between the production of stem cells and the incorporation of their derivatives into lateral organ primordia.","definition_xrefs":["ISBN:0849397928","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meristem growth","termid":"GO:0035266"},{"relation_name":"is_a","term_name":"developmental vegetative growth","termid":"GO:0080186"},{"relation_name":"part_of","term_name":"shoot system development","termid":"GO:0048367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vegetative meristem growth","termid":"GO:0010448"}


id: MONDO:0001074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurological disorder presenting in childhood that is characterized by either motor or phonic tics, but not both, that occur daily or nearly daily for at least a year and are not attributed to an identifiable cause.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tic disorder","termid":"MONDO:0002420"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic tic disorder","secondary_identifiers":["ICD9:307.22","ICD10CM:F95.1","DOID:10600","MEDGEN:40301","NCIT:C116768","UMLS:C0008701"],"synonyms":[{"name":"chronic motor or vocal tic disorder","type":"exact"},{"name":"tic disorder, chronic","type":"exact"}],"termid":"MONDO:0001074","xrefs":{"Monarch":{"xref_id":"0001074"}}}


id: PBO:0063981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 15","termid":"PBO:0063981"}


id: PBO:0049059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 65","termid":"PBO:0049059"}


id: PBO:0002937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3i","termid":"PBO:0002937"}


id: GO:1900878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (Z)-nonadeca-1,14-diene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"(Z)-nonadeca-1,14-diene metabolic process","synonyms":[{"name":"(Z)-nonadeca-1,14-diene metabolism","type":"exact"}],"termid":"GO:1900878"}


id: PBO:0029186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_occurrence_of_activation_of_bipolar_cell_growth","termid":"PBO:0029186"}


id: PR:P87145
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein VAC14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR16023:SF0","OMA:SCHPO03640","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein VAC14 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.03","secondary_identifiers":["UniProtKB:P87145"],"synonyms":[{"name":"Spom972h-VAC14","type":"exact"}],"termid":"PR:P87145"}


id: GO:0102526
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 8-desmethylnovobiocic acid = S-adenosyl-L-homocysteine + novobiocic acid + H+.","definition_xrefs":["GOC:pz","EC:2.1.1.284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"8-demethylnovobiocic acid C8-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14543","RHEA:36651"],"termid":"GO:0102526"}


id: GO:0022843
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a voltage-gated channel. A cation is a positively charged ion. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated monoatomic ion channel activity","termid":"GO:0005244"},{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"voltage-gated monoatomic cation channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6788999","Reactome:R-HSA-2534378"],"synonyms":[{"name":"voltage-gated cation channel activity","type":"broad"}],"termid":"GO:0022843","terms_by_termid":{"GO:0008331":null}}


id: GO:0014841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of satellite cells, resulting in the expansion of the cell population. Satellite cells are quiescent cells that are located between the basal lamina and the plasmalemma of the muscle fiber, which are the main contributors to postnatal muscle growth. In adult muscle, satellite cells become activated to divide and differentiate in response to muscle damage.","definition_xrefs":["GOC:mtg_muscle","PMID:16607119","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle cell proliferation","termid":"GO:0014856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell proliferation","termid":"GO:0014841"}


id: GO:0002545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A chronic inflammatory response to a non-antigenic stimulus such as heat or physical trauma.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic inflammatory response","termid":"GO:0002544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002545"}


id: FYPO:0000751
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nickel ions. Cells stop growing (and may die) at a concentration of nickel ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to nickel","synonyms":[{"name":"hypersensitive to nickel","type":"exact"},{"name":"sensitive to nickel during mitotic cell cycle","type":"related"},{"name":"sensitive to nickel during vegetative growth","type":"exact"},{"name":"sensitive to nickel ions","type":"exact"}],"termid":"FYPO:0000751"}


id: PR:Q10141
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mms1 gene.","definition_xrefs":["UniProtKB:Q10141","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3H8.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.05c","synonyms":[{"name":"Spom972h-mms1","type":"exact"}],"termid":"PR:Q10141"}


id: PBO:0002563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein alpha subunit (predicted)","termid":"PBO:0002563"}


id: MONDO:0011490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diffuse panbronchiolitis is a rare chronic inflammatory obstructive pulmonary disease primarily affecting the respiratory bronchioles throughout both lungs and inducing sinobronchial infection. Onset occurs in the second to fifth decade of life and manifests by chronic cough, exertional dyspnea, and sputum production. Most patients also have chronic paranasal sinusitis","definition_xrefs":["Orphanet:171700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic obstructive pulmonary disease","termid":"MONDO:0005002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse panbronchiolitis","secondary_identifiers":["icd11.foundation:291357751","MedDRA:10062952","MESH:C536174","ICD9:491.8","SCTID:430476004","MEDGEN:163897","UMLS:C0878555","GARD:8526","OMIM:604809"],"synonyms":[{"name":"DPb","type":"related"},{"name":"PBLT","type":"related"},{"name":"panbronchiolitis, diffuse","type":"related"}],"termid":"MONDO:0011490","xrefs":{"Monarch":{"xref_id":"0011490"}}}


id: PBO:0082674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the eisosome with unknown function; GFP-fusion protein localizes to the cytoplasm; specifically phosphorylated in vitro by mammalian diphosphoinositol pentakisphosphate (IP7)","termid":"PBO:0082674"}


id: PBO:0086123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for fermentation at low temperature; plays a role in the maturation of secretory proteins; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086123"}


id: MONDO:0006520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder which affects the volar surfaces of fingers. Clinical signs include recurrent, spontaneous or post-traumatic bruising of fingers. The clinical course of the resultant hematoma usually follows a pattern of resolution within days.","definition_xrefs":["NCIT:C35467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Achenbach syndrome","secondary_identifiers":["SCTID:238824006","UMLS:C0473563","PMID:22915534","MEDGEN:99176","EFO:1000661","DOID:6687"],"synonyms":[{"name":"Achenbach syndrome","type":"exact"},{"name":"paroxysmal hematoma of the finger","type":"exact"}],"termid":"MONDO:0006520","xrefs":{"Monarch":{"xref_id":"0006520"}}}


id: GO:0038129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to the tyrosine kinase receptor ERBB3 on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription. ERBB3 receptors have impaired kinase activity and rely on the kinase activity of the heterodimer partner for activation and signal transmission.","definition_xrefs":["GOC:jc","PMID:16460914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB signaling pathway","termid":"GO:0038127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ERBB3 signaling pathway","synonyms":[{"name":"ERBB3 signalling pathway","type":"exact"},{"name":"HER3 signaling pathway","type":"exact"},{"name":"receptor tyrosine-protein kinase erbB-3 signaling pathway","type":"exact"}],"termid":"GO:0038129"}


id: GO:0019283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"he chemical reactions and pathways resulting in the formation of L-methionine from L-homoserine, via the intermediates O-phospho-L-homoserine and cystathionine.","definition_xrefs":["MetaCyc:PWY-702","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"'de novo' L-methionine biosynthetic process","termid":"GO:0071266"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0006520"],"is_obsolete":false,"name":"L-methionine biosynthetic process from L-homoserine via O-phospho-L-homoserine and cystathionine","synonyms":[{"name":"L-methionine formation from O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"L-methionine synthesis from O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"methionine biosynthetic process from O-phospho-L-homoserine and cystathionine","type":"exact"}],"termid":"GO:0019283"}


id: PBO:0058304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4678","termid":"PBO:0058304"}


id: PBO:0004735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylethanolamine N-methyltransferase Cho2","termid":"PBO:0004735"}


id: GO:0005784
data:
  {"annotated_genes":["SJAG_00064","SJAG_00959","SJAG_02208","SJAG_02330"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[63970,98377,106530,109706],"is_not":false,"summary":null,"term":"GO:0005784"}]},"cv_name":"cellular_component","definition":"A translocon complex that contains a core heterotrimer of conserved alpha, beta and gamma subunits, and may contain additional proteins (translocon-associated proteins or TRAPs); in budding yeast the core proteins are Sec61p, Sbh1p, and Sss1p. The Sec61 translocon complex functions in cotranslational and posttranslational translocation events.","definition_xrefs":["GOC:mah","PMID:18166647","PMID:33960686","PMID:32820719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocon complex","termid":"GO:0071256"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00959":null,"SJAG_02208":null,"SJAG_02330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005789","GO:0005737","GO:0032991","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"Sec61 translocon complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"Sec61p-Sbh1p-Sss1p complex","type":"narrow"}],"termid":"GO:0005784","terms_by_termid":{"GO:0005784":null}}


id: GO:0106334
data:
  {"annotated_genes":["SJAG_04418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119341],"is_not":false,"summary":null,"term":"GO:0106334"}]},"cv_name":"molecular_function","definition":"Catalysis of the conversion of a 3'-deoxyribose phosphate in DNA to a 3'-phosphate.","definition_xrefs":["RHEA:65764","PMID:22084197","PMID:21276450","GOC:mah","PMID:22375014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3'-deoxyribose phosphate lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3'-dRP lyase","type":"related"},{"name":"3'-dRP lyase activity","type":"related"}],"termid":"GO:0106334","terms_by_termid":{"GO:0106334":null}}


id: PBO:0032704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_G2_phase_during_glucose_starvation","termid":"PBO:0032704"}


id: PBO:0034789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family fusion GTPase Msp1","termid":"PBO:0034789"}


id: PBO:0030911
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_physical_quality_phenotype_during_vegetative_growth","termid":"PBO:0030911"}


id: GO:0019023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome composed of double stranded RNA.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete dsRNA viral genome (obsolete GO:0019023)","termid":"GO:0019023"}


id: PBO:0035947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_3'-end_processing_during_cellular_response_to_endoplasmic_reticulum_stress","termid":"PBO:0035947"}


id: GO:0004009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP-binding cassette (ABC) transporter activity (obsolete GO:0004009)","synonyms":[{"name":"ATP-binding cassette (ABC) transporter activity","type":"exact"}],"termid":"GO:0004009"}


id: MONDO:0005741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Allergic reaction to eggs that is triggered by the immune system.","definition_xrefs":["MESH:D021181"],"gene_count":0,"genotype_count":0,"name":"obsolete egg allergy (obsolete MONDO:0005741)","secondary_identifiers":["ICD9:V15.03","SCTID:91930004","DOID:4377"],"synonyms":[{"name":"allergy of egg","type":"exact"},{"name":"allergy to eggs","type":"exact"},{"name":"egg allergic disease","type":"exact"}],"termid":"MONDO:0005741","xrefs":{"Monarch":{"xref_id":"0005741"}}}


id: FYPO:0000055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form microtubules that are longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0002399","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"long microtubules","synonyms":[{"name":"elongated microtubules","type":"exact"},{"name":"long microtubules during mitotic cell cycle","type":"related"},{"name":"long microtubules during vegetative growth","type":"exact"},{"name":"microtubule organization defects, long microtubules","type":"exact"}],"termid":"FYPO:0000055"}


id: MONDO:0010370
data:
  {"annotated_genes":["SJAG_01831"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87361],"is_not":false,"summary":null,"term":"MONDO:0010370"}]},"cv_name":"mondo","definition":"An X-linked inherited form of Cornelia De Lange syndrome caused by mutations in the SMC1A gene mapped to chromosome Xp11.22. Patients have a milder form of the syndrome compared to patients with the NIPBL gene mutation.","definition_xrefs":["NCIT:C75485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cornelia de Lange syndrome","termid":"MONDO:0016033"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01831":null},"genotype_count":0,"is_obsolete":false,"name":"Cornelia de Lange syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1802395","GARD:15259","MEDGEN:315658","DOID:0080506","OMIM:300590"],"synonyms":[{"name":"CDLS2","type":"related"},{"name":"Cdls, X-linked","type":"related"},{"name":"Cornelia DE Lange syndrome 2","type":"related"},{"name":"Cornelia De Lange syndrome type 2","type":"exact"},{"name":"Cornelia De Lange syndrome, X-linked","type":"related"},{"name":"Cornelia de Lange syndrome 2","type":"exact"},{"name":"Cornelia de Lange syndrome 2, X-linked dominant","type":"exact"},{"name":"Cornelia de Lange syndrome caused by mutation in SMC1A","type":"exact"},{"name":"SMC1A Cornelia de Lange syndrome","type":"exact"},{"name":"X-linked Cornelia De Lange syndrome","type":"exact"}],"termid":"MONDO:0010370","terms_by_termid":{"MONDO:0010370":null},"xrefs":{"Monarch":{"xref_id":"0010370"}}}


id: MONDO:0022884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniofacial dysostosis arthrogryposis progeroid appearance","synonyms":[{"name":"Van Biervliet Hendrickx Van Ertbruggen syndrome","type":"related"}],"termid":"MONDO:0022884","xrefs":{"Monarch":{"xref_id":"0022884"}}}


id: GO:0008229
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to microorganisms or other particulate material (for example, foreign erythrocytes) to increase the susceptibility of the latter to phagocytosis.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete opsonin activity (obsolete GO:0008229)","synonyms":[{"name":"opsonin activity","type":"exact"}],"termid":"GO:0008229"}


id: GO:0072343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of pancreatic stellate cells, resulting in the expansion of a pancreatic stellate cell population. Pancreatic stellate cells are found in the periacinar space of the exocrine pancreas and in perivascular and periductal regions of the pancreas, and have long cytoplasmic processes that encircle the base of the acinus.","definition_xrefs":["PMID:17200706","CL:0002410","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast proliferation","termid":"GO:0048144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic stellate cell proliferation","termid":"GO:0072343"}


id: FYPO:0003024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is abnormal. Synapsis is the process in which the side by side pairing and physical juxtaposition of homologous chromosomes is established and maintained. Pairing may be assayed globally or at one or more specific loci.","definition_xrefs":["PomBase:mah","GO:0007129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal homologous chromosome pairing","synonyms":[{"name":"abnormal homologous chromosome pairing at meiosis","type":"exact"},{"name":"abnormal synapsis","type":"exact"}],"termid":"FYPO:0003024"}


id: GO:1900723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein adenylylation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein adenylylation","termid":"GO:1900722"},{"relation_name":"negatively_regulates","term_name":"protein adenylylation","termid":"GO:0018117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein adenylylation","synonyms":[{"name":"down regulation of protein AMPylation","type":"exact"},{"name":"down regulation of protein adenylation","type":"exact"},{"name":"down regulation of protein adenylylation","type":"exact"},{"name":"down regulation of protein amino acid adenylylation","type":"exact"},{"name":"down-regulation of protein AMPylation","type":"exact"},{"name":"down-regulation of protein adenylation","type":"exact"},{"name":"down-regulation of protein adenylylation","type":"exact"},{"name":"down-regulation of protein amino acid adenylylation","type":"exact"},{"name":"downregulation of protein AMPylation","type":"exact"},{"name":"downregulation of protein adenylation","type":"exact"},{"name":"downregulation of protein adenylylation","type":"exact"},{"name":"downregulation of protein amino acid adenylylation","type":"exact"},{"name":"inhibition of protein AMPylation","type":"exact"},{"name":"inhibition of protein adenylation","type":"exact"},{"name":"inhibition of protein adenylylation","type":"narrow"},{"name":"inhibition of protein amino acid adenylylation","type":"exact"},{"name":"negative regulation of protein AMPylation","type":"exact"},{"name":"negative regulation of protein adenylation","type":"exact"},{"name":"negative regulation of protein amino acid adenylylation","type":"exact"}],"termid":"GO:1900723"}


id: PBO:0051424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-1","termid":"PBO:0051424"}


id: MONDO:0001343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease in which the causes of the disease is a perturbation of the kidney leading to its dysfunction.","definition_xrefs":["MONDO:patterns/disease_by_dysfunctional_structure"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"impaired renal function disease","secondary_identifiers":["DOID:11705","UMLS:C0341677","ICD9:588.8","MEDGEN:574572","SCTID:197663003","ICD10CM:N25","ICD9:588.89","ICD9:588.9"],"synonyms":[{"name":"disease of kidney","type":"broad"},{"name":"kidney disease","type":"broad"}],"termid":"MONDO:0001343","xrefs":{"Monarch":{"xref_id":"0001343"}}}


id: PBO:0038475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 13","termid":"PBO:0038475"}


id: MONDO:0014864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypermanganesemia with dystonia in which the cause of the disease is a mutation in the SLC39A14 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypermanganesemia with dystonia","termid":"MONDO:0000214"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"disorder of manganese transport","termid":"MONDO:0017766"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"hypermanganesemia with dystonia 2","secondary_identifiers":["UMLS:C4310765","Orphanet:521406","GARD:17958","MEDGEN:934732","SCTID:768554008","DOID:0080537","OMIM:617013"],"synonyms":[{"name":"HMNDYT2","type":"exact"},{"name":"SLC39A14 hypermanganesemia with dystonia","type":"exact"},{"name":"hypermanganesemia with dystonia 2","type":"exact"},{"name":"hypermanganesemia with dystonia 2; HMNDYT2","type":"exact"},{"name":"hypermanganesemia with dystonia caused by mutation in SLC39A14","type":"exact"},{"name":"hypermanganesemia with dystonia type 2","type":"exact"}],"termid":"MONDO:0014864","xrefs":{"Monarch":{"xref_id":"0014864"}}}


id: GO:0048384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a retinoic acid binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"nuclear receptor-mediated signaling pathway","termid":"GO:0141193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"retinoic acid receptor signaling pathway","synonyms":[{"name":"RAR signaling pathway","type":"exact"},{"name":"nuclear receptor-mediated retinoic acid signaling pathway","type":"exact"},{"name":"retinoic acid receptor signalling pathway","type":"exact"}],"termid":"GO:0048384"}


id: GO:1905049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of metallopeptidase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:26473732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptidase activity","termid":"GO:0010466"},{"relation_name":"is_a","term_name":"regulation of metallopeptidase activity","termid":"GO:1905048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metallopeptidase activity","synonyms":[{"name":"down regulation of metallopeptidase activity","type":"exact"},{"name":"down regulation of metalloprotease activity","type":"narrow"},{"name":"down regulation of metalloproteinase activity","type":"narrow"},{"name":"down-regulation of metallopeptidase activity","type":"exact"},{"name":"down-regulation of metalloprotease activity","type":"narrow"},{"name":"down-regulation of metalloproteinase activity","type":"narrow"},{"name":"downregulation of metallopeptidase activity","type":"exact"},{"name":"downregulation of metalloprotease activity","type":"narrow"},{"name":"downregulation of metalloproteinase activity","type":"narrow"},{"name":"inhibition of metallopeptidase activity","type":"narrow"},{"name":"inhibition of metalloprotease activity","type":"narrow"},{"name":"inhibition of metalloproteinase activity","type":"narrow"},{"name":"negative regulation of metalloprotease activity","type":"narrow"},{"name":"negative regulation of metalloproteinase activity","type":"narrow"}],"termid":"GO:1905049"}


id: PBO:0051133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2/OR16-5 (non-functional)","termid":"PBO:0051133"}


id: PBO:0071123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 125","termid":"PBO:0071123"}


id: FYPO:0006672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mating cells undergo transient cell fusion (cytogamy), and then one or both cells undergo haploid meiosis and sporulation. In transient cytogamy, cells fuse for a much shorter time than normal during mating, separate with incomplete exchange of cytosol contents, and the conjugation pore then reseals.","definition_xrefs":["PMID:30089908","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abolished nuclear fusion during mating","termid":"FYPO:0000511"},{"relation_name":"has_part","term_name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"},{"relation_name":"is_a","term_name":"abolished nuclear fusion during mating","termid":"FYPO:0000511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"has_part","termid":"FYPO:0000301"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"transient cell fusion during mating followed by meiotic cell cycle entry and sporulation","synonyms":[{"name":"transient cell fusion during mating followed by meiotic cell cycle entry and sporulation in haploid","type":"exact"},{"name":"transient cytogamy followed by meiotic cell cycle entry and sporulation in haploid","type":"exact"}],"termid":"FYPO:0006672"}


id: PBO:0071570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 36","termid":"PBO:0071570"}


id: MONDO:0004978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aortic stenosis (obsolete MONDO:0004978)","secondary_identifiers":["NANDO:2100098"],"termid":"MONDO:0004978","xrefs":{"Monarch":{"xref_id":"0004978"}}}


id: PBO:0055492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2926","termid":"PBO:0055492"}


id: GO:0000480
data:
  {"annotated_genes":["SJAG_02250","SJAG_04224","SJAG_04524"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70774,73360,78304],"is_not":false,"summary":null,"term":"GO:0000480"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage within the 5'-External Transcribed Spacer (ETS) of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript. Endonucleolytic cleavage within the 5'-ETS of the pre-RNA is conserved as one of the early steps of rRNA processing in all eukaryotes, but the specific position of cleavage is variable.","definition_xrefs":["PMID:15282326","PMID:10690410","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02250":null,"SJAG_04224":null,"SJAG_04524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0042254","GO:0010467"],"is_obsolete":false,"name":"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"endonucleolytic cleavage at A-prime","type":"narrow"},{"name":"endonucleolytic cleavage at A0","type":"narrow"}],"termid":"GO:0000480","terms_by_termid":{"GO:0000480":null}}


id: PBO:0075501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and centriole associated 1","termid":"PBO:0075501"}


id: GO:0007083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell cycle process in which chromosome structure is altered from the condensed form taken on during mitosis to the relaxed disperse form held in resting cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic chromosome decondensation (obsolete GO:0007083)","termid":"GO:0007083"}


id: MOD:00612
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by derivatization of a residue with 3,3-dithiobis[sulfosuccinimidyl propanoate], DTSSP, or with Pierce EZ-Link Sulfo-NHS-SS-Biotin reagent, sulfosuccinimidyl 3-[(2-[biotinamido]ethyl)disulfanyl]propanoate, followed by reduction with dithiothreitol and then reaction with iodoacetamide.","definition_xrefs":["Unimod:293","PubMed:15121203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(carboxamidomethylthio)propanoylated residue","synonyms":[{"name":"3-(carbamidomethylthio)propanoyl","type":"related"},{"name":"CAMthiopropanoyl","type":"related"}],"termid":"MOD:00612"}


id: PBO:0077762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20 pseudogene 4","termid":"PBO:0077762"}


id: FYPO:0005111
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquitin-specific protease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ubiquitinyl hydrolase activity","termid":"FYPO:0003111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal ubiquitin-specific protease activity","termid":"FYPO:0005111"}


id: PBO:0051706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase F","termid":"PBO:0051706"}


id: GO:0045951
data:
  {"annotated_genes":["SJAG_00995"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79728],"is_not":false,"summary":null,"term":"GO:0045951"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA recombination during mitosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic recombination","termid":"GO:0000019"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"positively_regulates","term_name":"mitotic recombination","termid":"GO:0006312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of mitotic recombination","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"activation of mitotic recombination","type":"narrow"},{"name":"positive regulation of recombination within rDNA repeats","type":"narrow"},{"name":"stimulation of mitotic recombination","type":"narrow"},{"name":"up regulation of mitotic recombination","type":"exact"},{"name":"up-regulation of mitotic recombination","type":"exact"},{"name":"upregulation of mitotic recombination","type":"exact"}],"termid":"GO:0045951","terms_by_termid":{"GO:0045951":null}}


id: MONDO:0100020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A childhood-onset epilepsy that is characterized by frequent seizures of multiple types, including nocturnal focal motor and fronto-parietal opercular seizures, and daytime focal motor seizures with negative myoclonus and atypical absence seizures. Centrotemporal sharp waves are seen on EEG. During the phase of the epilepsy when seizures are frequent, neuropsychological deficits and motor impairment may be present. These deficits improve when seizures remit.","direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"atypical childhood epilepsy with centrotemporal spikes","synonyms":[{"name":"atonic-benign childhood epilepsy with centrotemporal spikes","type":"exact"},{"name":"atypical benign partial epilepsy of childhood","type":"exact"},{"name":"pseudo-Lennox syndrome","type":"exact"}],"termid":"MONDO:0100020","xrefs":{"Monarch":{"xref_id":"0100020"}}}


id: MONDO:0000304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Talaromyces marneffei.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic systemic mycosis","termid":"MONDO:0045033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penicilliosis","secondary_identifiers":["SCTID:713315007","UMLS:C1274008","DOID:0050288","MEDGEN:697372","SCTID:372936000"],"synonyms":[{"name":"Penicillium marneffei infectious disease","type":"exact"},{"name":"Talaromyces marneffei caused disease or disorder","type":"exact"},{"name":"Talaromyces marneffei disease or disorder","type":"exact"},{"name":"Talaromyces marneffei infectious disease","type":"exact"},{"name":"infection caused by Penicillium marneffei","type":"exact"},{"name":"infection caused by Talaromyces marneffei","type":"exact"},{"name":"infection due to Penicillium marneffei","type":"exact"}],"termid":"MONDO:0000304","xrefs":{"Monarch":{"xref_id":"0000304"}}}


id: PR:O94390
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp7 gene.","definition_xrefs":["UniProtKB:O94390","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit d, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.13","synonyms":[{"name":"Spom972h-atp7","type":"exact"}],"termid":"PR:O94390"}


id: MONDO:0002120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neuroendocrine neoplasm composed of cells containing secretory granules that stain positive for NSE and chromogranin. The neoplastic cells are often round and form clusters or trabecular sheets. Representative examples are small cell carcinoma, large cell neuroendocrine carcinoma, and Merkel cell carcinoma.","definition_xrefs":["NCIT:C3773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"},{"relation_name":"is_a","term_name":"malignant endocrine neoplasm","termid":"MONDO:0021069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"neuroendocrine carcinoma","secondary_identifiers":["UMLS:C0206695","ICDO:8246/3","MEDGEN:104919","DOID:1800","MESH:D018278","SCTID:253000007"],"synonyms":[{"name":"NEC","type":"exact"},{"name":"neuroendocrine cancer","type":"exact"},{"name":"neuroendocrine carcinoma","type":"exact"}],"termid":"MONDO:0002120","xrefs":{"Monarch":{"xref_id":"0002120"}}}


id: PBO:0074718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 78","termid":"PBO:0074718"}


id: GO:0090391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly of a granum. A granum is a distinct stack of lamellae seen within chloroplasts.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"chloroplast organization","termid":"GO:0009658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"granum assembly","synonyms":[{"name":"grana formation","type":"exact"}],"termid":"GO:0090391"}


id: PBO:0004649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Srb4","termid":"PBO:0004649"}


id: GO:0033193
data:
  {"annotated_genes":["SJAG_03945","SJAG_02401","SJAG_01046","SJAG_03997"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94402,96487,103560,117510],"is_not":false,"summary":null,"term":"GO:0033193"}]},"cv_name":"cellular_component","definition":"A nucleosome-binding protein complex that comprises two SWIRM domain histone demethylases and two PHD finger proteins. The complex is involved in transcriptional regulation via heterochromatic silencing and the regulation of chromatin boundary formation, and was first identified in fission yeast.","definition_xrefs":["PMID:17440621","PMID:17434129","PMID:17371846","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01046":null,"SJAG_02401":null,"SJAG_03945":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Lsd1/2 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SAPHIRE complex","type":"exact"},{"name":"Swm complex","type":"exact"},{"name":"Swm1/2 complex","type":"related"}],"termid":"GO:0033193","terms_by_termid":{"GO:0033193":null}}


id: GO:0014714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, taking place in the head, whereby the developmental fate of a cell becomes restricted such that it will develop into a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast fate commitment","termid":"GO:0048625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate commitment in head","termid":"GO:0014714"}


id: PBO:0071738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 36","termid":"PBO:0071738"}


id: MONDO:0018770
data:
  {"annotated_genes":["SJAG_01370"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"}]},"cv_name":"mondo","definition":"Jeune syndrome, also called asphyxiating thoracic dystrophy, is a short-rib dysplasia characterized by a narrow thorax, short limbs and radiological skeletal abnormalities including \\\"trident\\\" aspect of the acetabula and metaphyseal changes.","definition_xrefs":["Orphanet:474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"short rib-polydactyly syndrome","termid":"MONDO:0015461"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Jeune syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050592","SCTID:75049004","UMLS:C0265275","MEDGEN:78548","MedDRA:10057621","GARD:3049","NCIT:C84794","icd11.foundation:554018956","NORD:1074","MESH:C537571","OMIMPS:208500"],"synonyms":[{"name":"ATD","type":"related"},{"name":"Asphyxiating Thoracic Dystrophy","type":"exact"},{"name":"Chondroectodermal dysplasia-like syndrome","type":"related"},{"name":"JATD","type":"exact"},{"name":"Jeune asphyxiating thoracic dystrophy","type":"exact"},{"name":"Jeune syndrome","type":"exact"},{"name":"Jeune's syndrome","type":"related"},{"name":"asphyxiating thoracic dystrophy","type":"related"},{"name":"asphyxiating thoracic dystrophy of the newborn","type":"exact"},{"name":"infantile thoracic dystrophy","type":"related"},{"name":"short-rib thoracic dysplasia","type":"exact"},{"name":"short-rib thoracic dysplasia with or without polydactyly","type":"exact"},{"name":"thoracic pelvic phalangeal dystrophy","type":"exact"}],"termid":"MONDO:0018770","terms_by_termid":{"MONDO:0054565":null},"xrefs":{"Monarch":{"xref_id":"0018770"}}}


id: PBO:0088290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S26","termid":"PBO:0088290"}


id: MONDO:0017609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal tubular dysgenesis is a rare disorder of the fetus characterized by absent or poorly developed proximal tubules of the kidneys, persistent oligohydramnios, leading to Potter sequence (facial dysmorphism with large and flat low-set ears, lung hypoplasia arthrogryposis and limb positioning defects), and skull ossification defects. It can be acquired during fetal development due to drugs taken by the mother or certain disorders (twin-twin transfusion syndrome, TTTS) or inherited in an autosomal recessive manner.","definition_xrefs":["Orphanet:3033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal tubular dysgenesis","secondary_identifiers":["SCTID:702397002","UMLS:C0266313","icd11.foundation:191424358","MEDGEN:82738","GARD:379"],"synonyms":[{"name":"primitive renal tubule syndrome","type":"exact"},{"name":"renotubular dysgenesis","type":"exact"}],"termid":"MONDO:0017609","xrefs":{"Monarch":{"xref_id":"0017609"}}}


id: PBO:0052974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L3MBTL histone methyl-lysine binding protein 4","termid":"PBO:0052974"}


id: PBO:0091268
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(1)","termid":"PBO:0091268"}


id: PBO:0031184
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division","termid":"PBO:0031184"}


id: GO:0052546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues, as part of the organization and biogenesis of the cell wall.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin metabolic process","termid":"GO:0045488"},{"relation_name":"part_of","term_name":"plant-type cell wall organization","termid":"GO:0009664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"cell wall pectin metabolic process","synonyms":[{"name":"cell wall pectin metabolism","type":"exact"},{"name":"cellulose and pectin-containing cell wall pectin metabolic process","type":"exact"},{"name":"pectin metabolism during cell wall biogenesis","type":"exact"},{"name":"plant-type cell wall pectin metabolic process","type":"exact"}],"termid":"GO:0052546"}


id: PBO:0000815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol cholinephosphotranferase/ diacylglycerol ethanolaminesphotranferase (predicted)","termid":"PBO:0000815"}


id: PBO:0072089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 20","termid":"PBO:0072089"}


id: PBO:0054475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1875","termid":"PBO:0054475"}


id: MONDO:0000906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Alzheimer disease 5 (obsolete MONDO:0000906)","synonyms":[{"name":"obsolete Alzheimer's disease 5","type":"exact"}],"termid":"MONDO:0000906","xrefs":{"Monarch":{"xref_id":"0000906"}}}


id: MONDO:0005440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-seminomatous malignant germ cell tumor characterized by the presence of large germ cells with abundant cytoplasm resembling epithelial cells, geographic necrosis, high mitotic activity, and pseudoglandular and pseudopapillary structures formation. It can arise from the testis, ovary, and extragonadal sites (central nervous system and mediastinum).","definition_xrefs":["NCIT:C3752"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"embryonal carcinoma","secondary_identifiers":["MEDGEN:61653","ONCOTREE:EMBCA","EFO:0004986","NANDO:2200067","DOID:3308","Orphanet:180226","ICDO:9070/3","GARD:5140","MESH:D018236","UMLS:C0206659"],"synonyms":[{"name":"carcinoma, embryonal, malignant","type":"exact"},{"name":"embryonal carcinoma","type":"exact"},{"name":"primary extragonadal embryonal carcinoma","type":"narrow"}],"termid":"MONDO:0005440","xrefs":{"Monarch":{"xref_id":"0005440"}}}


id: FYPO:0005807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the movement of one or more proteins within the plasma membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:25837586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein movement within plasma membrane","termid":"FYPO:0005807"}


id: PBO:0075849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 1","termid":"PBO:0075849"}


id: PBO:0068939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 182, pseudogene","termid":"PBO:0068939"}


id: PBO:0026675
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0026675"}


id: MONDO:0015140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive dementia with reduction of cognitive functions. It presents the same phenotype as sporadic Alzheimer disease (AD) but has an early age of onset, usually before 60 years old.","definition_xrefs":["Orphanet:1020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"familial Alzheimer disease","termid":"MONDO:0100087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0002039","MONDO:0005559"],"is_obsolete":false,"name":"early-onset autosomal dominant Alzheimer disease","secondary_identifiers":["GARD:12798"],"synonyms":[{"name":"EOFAD","type":"exact"},{"name":"early-onset familial autosomal dominant Alzheimer disease","type":"exact"},{"name":"early-onset, autosomal dominant Alzheimer disease","type":"related"}],"termid":"MONDO:0015140","xrefs":{"Monarch":{"xref_id":"0015140"}}}


id: MONDO:0010274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"testicular germ cell tumor","termid":"MONDO:0010108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular germ cell tumor 1","secondary_identifiers":["MESH:C564559","MEDGEN:337402","OMIM:300228","UMLS:C1846164"],"synonyms":[{"name":"TGCT1","type":"exact"},{"name":"testicular germ cell tumor","type":"broad"},{"name":"testicular germ cell tumor 1","type":"exact"},{"name":"testicular germ cell tumour","type":"broad"}],"termid":"MONDO:0010274","xrefs":{"Monarch":{"xref_id":"0010274"}}}


id: GO:0036478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacts with and increases L-dopa decarboxylase activity.","definition_xrefs":["GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"L-dopa decarboxylase activator activity","synonyms":[{"name":"DDC activator activity","type":"exact"}],"termid":"GO:0036478"}


id: PBO:0073915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 5","termid":"PBO:0073915"}


id: PBO:0028732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_hercynylcysteine_sulfoxide_level_during_vegetative_growth","termid":"PBO:0028732"}


id: PBO:0050900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha inducible protein 27","termid":"PBO:0050900"}


id: MONDO:0007064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of SCID characterized by profound lymphopenia and very low immunoglobulin levels of all isotypes resulting in severe and recurrent opportunistic infections.","definition_xrefs":["Orphanet:277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"},{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005046","MONDO:0019254"],"is_obsolete":false,"name":"severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency","secondary_identifiers":["NANDO:2200696","GARD:5748","MESH:C531816","CSP:1560-6660","NANDO:1200323","ICD9:277.2","NCIT:C3962","MEDGEN:354935","SCTID:44940001","DOID:5810","OMIM:102700","UMLS:C1863236","MedDRA:10066367"],"synonyms":[{"name":"ADA","type":"exact"},{"name":"ADA deficiency","type":"exact"},{"name":"ADA-SCID","type":"exact"},{"name":"SCID due to ADA deficiency","type":"exact"},{"name":"SCID due to ADA deficiency, delayed onset","type":"related"},{"name":"SCID due to ADA deficiency, early-onset","type":"exact"},{"name":"SCID due to ADA deficiency, late-onset","type":"related"},{"name":"SCID due to adenosine deaminase deficiency","type":"exact"},{"name":"adenosine deaminase deficiency","type":"exact"},{"name":"adenosine deaminase deficiency, partial","type":"related"},{"name":"adenosine deaminase deficiency, partial, Autosomal recessive, Somatic mosaicism","type":"exact"},{"name":"adenosine deaminase deficient severe combined immunodeficiency","type":"exact"},{"name":"partial ADA deficiency","type":"related"},{"name":"severe combined immunodeficiency due to ADA deficiency","type":"related"},{"name":"severe combined immunodeficiency due to ADA deficiency, Autosomal recessive, Somatic mosaicism","type":"exact"},{"name":"severe combined immunodeficiency due to adenosine deaminase deficiency","type":"related"},{"name":"severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-negative, due to adenosine deaminase deficiency","type":"exact"}],"termid":"MONDO:0007064","xrefs":{"Monarch":{"xref_id":"0007064"}}}


id: PBO:0082382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta3-like subunit of the yeast AP-3 complex; functions in transport of alkaline phosphatase to the vacuole via the alternate pathway; exists in both cytosolic and peripherally associated membrane-bound pools","termid":"PBO:0082382"}


id: GO:0032562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dAMP, deoxyadenosine monophosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl deoxyribonucleotide binding","termid":"GO:0032558"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dAMP binding","termid":"GO:0032562"}


id: GO:0090323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a prostaglandin that contributes to the immune response. Prostaglandins are a group of biologically active metabolites which contain a cyclopentane ring.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin secretion","termid":"GO:0032310"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"prostaglandin secretion involved in immune response","termid":"GO:0090323"}


id: FYPO:0007892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone exchange at subtelomeric heterochromatin is increased. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PMID:34731638","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone turnover","termid":"FYPO:0007472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased histone turnover at subtelomeric heterochromatin","termid":"FYPO:0007892"}


id: GO:0042931
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of the siderochrome enterochelin, a cyclic trimer of 2, 3 dihydroxybenzoylserine from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"enterobactin transmembrane transporter activity","synonyms":[{"name":"enterobactin transporter activity","type":"related"},{"name":"enterochelin transporter activity","type":"exact"}],"termid":"GO:0042931"}


id: PBO:0089121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase, unknown specificity, implicated in glutathione metabolism","termid":"PBO:0089121"}


id: GO:0072722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amitrole stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amitrole","synonyms":[{"name":"response to 3-amino-1,2,4-triazole","type":"exact"}],"termid":"GO:0072722"}


id: GO:0070238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A T cell apoptotic process that occurs towards the end of the expansion phase following the initial activation of mature T cells by antigen via the accumulation of pro-apoptotic gene products and decrease in anti-apoptotic gene products.","definition_xrefs":["GOC:mtg_apoptosis","ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"},{"relation_name":"part_of","term_name":"T cell homeostasis","termid":"GO:0043029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activated T cell autonomous cell death","synonyms":[{"name":"ACAD","type":"broad"},{"name":"activated T cell apoptosis","type":"broad"},{"name":"activated T lymphocyte autonomous cell death","type":"exact"},{"name":"activated T-cell autonomous cell death","type":"exact"},{"name":"activated T-lymphocyte autonomous cell death","type":"exact"},{"name":"activated cell autonomous cell death","type":"broad"}],"termid":"GO:0070238"}


id: GO:0031803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 6 metabotropic glutamate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 6 metabotropic glutamate receptor binding","synonyms":[{"name":"type 6 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031803"}


id: GO:0090292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nuclear matrix, the dense fibrillar network lying on the inner side of the nuclear membrane, is directly or indirectly linked to the nuclear membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear matrix organization","termid":"GO:0043578"},{"relation_name":"is_a","term_name":"maintenance of protein location in nucleus","termid":"GO:0051457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nuclear matrix anchoring at nuclear membrane","synonyms":[{"name":"nucleoskeleton anchoring at nuclear membrane","type":"exact"}],"termid":"GO:0090292"}


id: MONDO:0014732
data:
  {"annotated_genes":["SJAG_01772","SJAG_04966"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86275,86276],"is_not":false,"summary":null,"term":"MONDO:0014732"}]},"cv_name":"mondo","definition":"Any leukodystrophy in which the cause of the disease is a mutation in the VPS11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"VPS11-related neurological disorder","termid":"MONDO:0100617"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01772":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelinating leukodystrophy 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:466934","MEDGEN:905068","OMIM:616683","DOID:0060796","GARD:17837","UMLS:C4225247"],"synonyms":[{"name":"HLD12","type":"exact"},{"name":"VPS11 leukodystrophy","type":"exact"},{"name":"VPS11-related autosomal recessive hypomyelinating leukodystrophy","type":"related"},{"name":"VPS11-related autosomal recessive hypomyelinating leukoencephalopathy","type":"exact"},{"name":"hypomyelinating leukodystrophy type 12","type":"exact"},{"name":"leukodystrophy caused by mutation in VPS11","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 12","type":"exact"},{"name":"leukodystrophy, hypomyelinating, type 12","type":"exact"}],"termid":"MONDO:0014732","terms_by_termid":{"MONDO:0014732":null},"xrefs":{"Monarch":{"xref_id":"0014732"}}}


id: MONDO:0023224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of reflex epilepsy that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflex epilepsy","termid":"MONDO:0017768"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"inherited reflex epilepsy","synonyms":[{"name":"hereditary reflex epilepsy","type":"exact"}],"termid":"MONDO:0023224","xrefs":{"Monarch":{"xref_id":"0023224"}}}


id: PBO:0044833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 121","termid":"PBO:0044833"}


id: MONDO:0013868
data:
  {"annotated_genes":["SJAG_03349"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86479],"is_not":false,"summary":null,"term":"MONDO:0013868"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disseminated superficial actinic porokeratosis","termid":"MONDO:0019212"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03349":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"porokeratosis 7, multiple types","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3553549","MEDGEN:766463","OMIM:614714","GARD:15838"],"synonyms":[{"name":"POROK7","type":"exact"},{"name":"porokeratosis 7, disseminated superficial actinic type","type":"exact"},{"name":"porokeratosis 7, multiple types","type":"exact"}],"termid":"MONDO:0013868","terms_by_termid":{"MONDO:0013868":null},"xrefs":{"Monarch":{"xref_id":"0013868"}}}


id: PBO:0056769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 21A pseudogene 1","termid":"PBO:0056769"}


id: PATO:0002441
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape in which the bearer's surface is highly topographical with ridges, pits, rugosity or other surface structures.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornamentation","termid":"PATO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornamented","termid":"PATO:0002441"}


id: MOD:00491
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:119#C","PubMed:11861642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"thio ether formation - BTP Adduct","synonyms":[{"name":"IBTP","type":"related"},{"name":"Thio Ether Formation - BTP Adduct","type":"related"}],"termid":"MOD:00491"}


id: PBO:0090298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk33","termid":"PBO:0090298"}


id: PBO:0040458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase 13A1","termid":"PBO:0040458"}


id: GO:0009327
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that possesses NAD(P)+ transhydrogenase (AB-specific) activity. Homodimeric, trimeric, and heterotetrameric complexes have been identified.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)+ transhydrogenase complex (AB-specific) (obsolete GO:0009327)","termid":"GO:0009327"}


id: MONDO:0004600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"monocytic leukemia","secondary_identifiers":["ICD9:206.80","DOID:8527","MEDGEN:109338","UMLS:C0598894","SCTID:188744006","ICD9:206.81","ICD9:206.91","ICD9:206.90","ICD9:206.8"],"synonyms":[{"name":"schilling's leukaemia","type":"exact"},{"name":"schilling's leukemia","type":"exact"}],"termid":"MONDO:0004600","xrefs":{"Monarch":{"xref_id":"0004600"}}}


id: MONDO:0014126
data:
  {"annotated_genes":["SJAG_04738"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86340],"is_not":false,"summary":null,"term":"MONDO:0014126"}]},"cv_name":"mondo","definition":"Any Perrault syndrome in which the cause of the disease is a mutation in the LARS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Perrault syndrome","termid":"MONDO:0017312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005047"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0004069","MONDO:0005066","MONDO:0005047"],"is_obsolete":false,"name":"Perrault syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3809105","MEDGEN:815435","OMIM:615300","GARD:15943"],"synonyms":[{"name":"LARS2 Perrault syndrome","type":"exact"},{"name":"PRLTS4","type":"related"},{"name":"Perrault syndrome 4","type":"exact"},{"name":"Perrault syndrome caused by mutation in LARS2","type":"exact"},{"name":"Perrault syndrome type 4","type":"exact"}],"termid":"MONDO:0014126","terms_by_termid":{"MONDO:0014126":null},"xrefs":{"Monarch":{"xref_id":"0014126"}}}


id: GO:1900948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of isoprene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"negative regulation of isoprene metabolic process","termid":"GO:1900945"},{"relation_name":"is_a","term_name":"regulation of isoprene biosynthetic process","termid":"GO:1900947"},{"relation_name":"negatively_regulates","term_name":"isoprene biosynthetic process","termid":"GO:0043612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of isoprene biosynthetic process","synonyms":[{"name":"down regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"down regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"down regulation of hemiterpene biosynthesis","type":"exact"},{"name":"down regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"down regulation of isoprene biosynthetic process","type":"exact"},{"name":"down-regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"down-regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"down-regulation of hemiterpene biosynthesis","type":"exact"},{"name":"down-regulation of hemiterpene biosynthetic process","type":"exact"},{"name":"down-regulation of isoprene biosynthetic process","type":"exact"},{"name":"downregulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"downregulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"downregulation of hemiterpene biosynthesis","type":"exact"},{"name":"downregulation of hemiterpene biosynthetic process","type":"exact"},{"name":"downregulation of isoprene biosynthetic process","type":"exact"},{"name":"inhibition of 2-methyl-1,3-butadiene biosynthesis","type":"narrow"},{"name":"inhibition of 2-methyl-1,3-butadiene biosynthetic process","type":"narrow"},{"name":"inhibition of hemiterpene biosynthesis","type":"narrow"},{"name":"inhibition of hemiterpene biosynthetic process","type":"narrow"},{"name":"inhibition of isoprene biosynthetic process","type":"narrow"},{"name":"negative regulation of 2-methyl-1,3-butadiene biosynthesis","type":"exact"},{"name":"negative regulation of 2-methyl-1,3-butadiene biosynthetic process","type":"exact"},{"name":"negative regulation of hemiterpene biosynthesis","type":"exact"},{"name":"negative regulation of hemiterpene biosynthetic process","type":"exact"}],"termid":"GO:1900948"}


id: MONDO:0020495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PEHO-like syndrome is a rare, genetic neurological disease characterized by progressive encephalopathy, early-onset seizures with a hypsarrhythmic pattern, facial and limb edema, severe hypotonia, early arrest of psychomotor development and craniofacial dysmorphism (evolving microcephaly, narrow forehead, short nose, prominent auricles, open mouth, micrognathia), in the absence of neuro-ophthalmic or neuroradiologic findings. Poor visual responsiveness, growth failure and tapering fingers are also associated.","definition_xrefs":["Orphanet:99807"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"PEHO syndrome","termid":"MONDO:0009841"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEHO-like syndrome","secondary_identifiers":["OMIM:617507","GARD:16911","MEDGEN:337956","UMLS:C1850056"],"synonyms":[{"name":"PEHO syndrome-like","type":"exact"},{"name":"PEHOL","type":"related"},{"name":"peho-like syndrome","type":"exact"},{"name":"progressive encephalopathy with edema, hypsarrhythmia, and optic atrophy-like syndrome","type":"exact"}],"termid":"MONDO:0020495","xrefs":{"Monarch":{"xref_id":"0020495"}}}


id: MONDO:0021151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary vs non-hereditary etiology","termid":"MONDO:0021149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-genetic","synonyms":[{"name":"non-genomic","type":"related"}],"termid":"MONDO:0021151","xrefs":{"Monarch":{"xref_id":"0021151"}}}


id: PBO:0003750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L17","termid":"PBO:0003750"}


id: PBO:0064570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"popeye domain containing 2","termid":"PBO:0064570"}


id: GO:0018218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The phosphorylation of peptidyl-cysteine to form peptidyl-S-phospho-L-cysteine.","definition_xrefs":["RESID:AA0034"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine phosphorylation (obsolete GO:0018218)","termid":"GO:0018218"}


id: GO:1902272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of (R)-carnitine transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:23755272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"(R)-carnitine transmembrane transport","termid":"GO:1902270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of (R)-carnitine transmembrane transport","termid":"GO:1902272"}


id: PBO:0060722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A9 pseudogene 1","termid":"PBO:0060722"}


id: GO:0030662
data:
  {"annotated_genes":["SJAG_04569","SJAG_04644","SJAG_00906","SJAG_01939","SJAG_04391","SJAG_04513","SJAG_00557","SJAG_01508","SJAG_05344","SJAG_01809","SJAG_03907","SJAG_02453","SJAG_01633","SJAG_02539","SJAG_02177","SJAG_00192","SJAG_05345","SJAG_00284","SJAG_03153","SJAG_02282","SJAG_02482","SJAG_02160","SJAG_04023","SJAG_00072","SJAG_04609","SJAG_04517","SJAG_00104","SJAG_00379","SJAG_03558","SJAG_02349","SJAG_01167","SJAG_04002","SJAG_00800","SJAG_04070","SJAG_04474","SJAG_02234","SJAG_01025","SJAG_04565","SJAG_00108","SJAG_02805"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78104,62264,113167,113378],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[108699,78441,74706,58348],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[65694,58832],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[74075,80097],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"},{"annotations":[94514,89228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030665"},{"annotations":[80228,78384,98780,73884,93557,64429,71281,78729,107484],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[96383,98092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030663"},{"annotations":[71750,73405,77429,95844,76020,76842,71720,75394,78767,75163],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[67663,70823,74245,76509,101415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0012507"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a coated vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"coated vesicle","termid":"GO:0030135"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00104":null,"SJAG_00108":null,"SJAG_00192":null,"SJAG_00284":null,"SJAG_00379":null,"SJAG_00557":null,"SJAG_00800":null,"SJAG_00906":null,"SJAG_01025":null,"SJAG_01167":null,"SJAG_01508":null,"SJAG_01633":null,"SJAG_01809":null,"SJAG_01939":null,"SJAG_02160":null,"SJAG_02177":null,"SJAG_02234":null,"SJAG_02282":null,"SJAG_02349":null,"SJAG_02453":null,"SJAG_02482":null,"SJAG_02539":null,"SJAG_02805":null,"SJAG_03153":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_04002":null,"SJAG_04023":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04474":null,"SJAG_04513":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null,"SJAG_04644":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"coated vesicle membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0030662","terms_by_termid":{"GO:0012507":null,"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030126":null,"GO:0030127":null,"GO:0030130":null,"GO:0030663":null,"GO:0030665":null}}


id: PR:U3H040
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18E5.09c gene.","definition_xrefs":["UniProtKB:U3H040","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPBC18E5.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.09c","synonyms":[{"name":"Spom972h-SPBC18E5.09c","type":"exact"}],"termid":"PR:U3H040"}


id: PBO:0028118
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_lateral_cortical_node,_with_protein_mislocalized_to_nucleus","termid":"PBO:0028118"}


id: PATO:0000225
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000225 sensory function (obsolete PATO:0000225)","termid":"PATO:0000225"}


id: MONDO:0001461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dermatophyte disease of the glabrous skin, excluding the scalp, beard, face, hands, feet, and groin.","direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"tinea corporis","secondary_identifiers":["ICD10CM:B35.4","DOID:12179","ICD9:110.5","MEDGEN:508197","UMLS:C0040252","SCTID:84849002"],"synonyms":[{"name":"dermatophytosis of the body","type":"exact"},{"name":"dermatophytosis of the trunk","type":"exact"}],"termid":"MONDO:0001461","xrefs":{"Monarch":{"xref_id":"0001461"}}}


id: FYPO:0001972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormal, and results in the formation of a septated cell. Nuclear division, contractile ring formation and constriction, and septum assembly are apparently normal, but the septum does not degrade. Additional rounds of nuclear division and cytokinesis may take place, resulting in the formation of a multiseptate cell.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:12654901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell separation after cytokinesis resulting in septated cell","synonyms":[{"name":"abnormal cell separation after cytokinesis resulting in septated cell during mitotic cell cycle","type":"related"},{"name":"abnormal cell separation after cytokinesis resulting in septated cell during vegetative growth","type":"exact"},{"name":"abnormal mitotic cytokinetic cell separation resulting in septated cell","type":"exact"},{"name":"abnormal septum digestion after cytokinesis resulting in septated cell","type":"exact"},{"name":"boomerang shaped","type":"related"}],"termid":"FYPO:0001972"}


id: PBO:0075271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 24","termid":"PBO:0075271"}


id: PBO:0004746
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GNL3L","termid":"PBO:0004746"}


id: PATO:0001954
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being linear, very narrow, tapering to a very fine point from a narrow base.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear","termid":"PATO:0001199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subulate","synonyms":[{"name":"awl-shaped","type":"exact"},{"name":"needle-like","type":"exact"}],"termid":"PATO:0001954"}


id: PATO:0000536
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000536 water sensitivity value (obsolete PATO:0000536)","termid":"PATO:0000536"}


id: GO:1901441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(hydroxyalkanoate).","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"poly(hydroxyalkanoate) metabolic process","termid":"GO:1901440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(hydroxyalkanoate) biosynthetic process","synonyms":[{"name":"poly(hydroxyalkanoate) anabolism","type":"exact"},{"name":"poly(hydroxyalkanoate) biosynthesis","type":"exact"},{"name":"poly(hydroxyalkanoate) formation","type":"exact"},{"name":"poly(hydroxyalkanoate) synthesis","type":"exact"}],"termid":"GO:1901441"}


id: PBO:0038345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_active_in","termid":"PBO:0038345"}


id: PBO:0054483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1883","termid":"PBO:0054483"}


id: PBO:0073073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndecan binding protein pseudogene 2","termid":"PBO:0073073"}


id: CHEBI:45979
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiabendazole","termid":"CHEBI:45979"}


id: MONDO:1012075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple exostoses, non-human animal","termid":"MONDO:1011944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple exostoses, pig","secondary_identifiers":["OMIA:000354-9823"],"termid":"MONDO:1012075","xrefs":{"Monarch":{"xref_id":"1012075"}}}


id: PBO:0029736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphatase_activity","termid":"PBO:0029736"}


id: PATO:0002373
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's location of features or characteristics along the mediolateral axis.","definition_xrefs":["PATOC:DS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positional polarity","termid":"PATO:0001769"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediolateral polarity","termid":"PATO:0002373"}


id: PATO:0002352
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's upper parts die back to the rootstock at the end of the growing season.","definition_xrefs":["PATOC:PG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shedability","termid":"PATO:0001729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herbaceous","termid":"PATO:0002352"}


id: GO:0009397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of folic acid and its derivatives.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"},{"relation_name":"is_a","term_name":"modified amino acid catabolic process","termid":"GO:0042219"},{"relation_name":"is_a","term_name":"pteridine-containing compound catabolic process","termid":"GO:0042560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"folic acid-containing compound catabolic process","synonyms":[{"name":"folate and derivative catabolic process","type":"exact"},{"name":"folate and derivative catabolism","type":"exact"},{"name":"folate-containing compound catabolic process","type":"exact"},{"name":"folate-containing compound catabolism","type":"exact"},{"name":"folic acid and derivative catabolic process","type":"exact"},{"name":"folic acid and derivative catabolism","type":"exact"},{"name":"folic acid-containing compound breakdown","type":"exact"},{"name":"folic acid-containing compound catabolism","type":"exact"},{"name":"folic acid-containing compound degradation","type":"exact"},{"name":"vitamin B9 and derivative catabolic process","type":"exact"},{"name":"vitamin B9 and derivative catabolism","type":"exact"},{"name":"vitamin M and derivative catabolic process","type":"exact"},{"name":"vitamin M and derivative catabolism","type":"exact"}],"termid":"GO:0009397"}


id: FYECO:0000177
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zinc was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited zinc","synonyms":[{"name":"limited Zn added","type":"exact"}],"termid":"FYECO:0000177"}


id: PBO:0045232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19","termid":"PBO:0045232"}


id: MONDO:0017397
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete constitutional dyserythropoietic anemia (obsolete MONDO:0017397)","secondary_identifiers":["Orphanet:293830"],"termid":"MONDO:0017397","xrefs":{"Monarch":{"xref_id":"0017397"}}}


id: MONDO:0005886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the mucosal lining of the mouth with the fungus Candida albicans.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidiasis","termid":"MONDO:0002026"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oral candidiasis","secondary_identifiers":["SCTID:79740000","MEDGEN:14300","UMLS:C0006849","DOID:14262","ICD9:112.0","EFO:0007406","MESH:D002180","NCIT:C28137"],"synonyms":[{"name":"candidiasis of mouth","type":"exact"},{"name":"mouth candidiasis","type":"exact"},{"name":"oral moniliasis","type":"exact"},{"name":"thrush","type":"broad"},{"name":"thrush, oral","type":"exact"}],"termid":"MONDO:0005886","xrefs":{"Monarch":{"xref_id":"0005886"}}}


id: PBO:0069397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 657, pseudogene","termid":"PBO:0069397"}


id: PBO:0069007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 251, pseudogene","termid":"PBO:0069007"}


id: PBO:0110402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class G (EMM blood group)","termid":"PBO:0110402"}


id: GO:1900898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of heptadecane biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heptadecane biosynthetic process","termid":"GO:1900896"},{"relation_name":"is_a","term_name":"positive regulation of heptadecane metabolic process","termid":"GO:1900901"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"positively_regulates","term_name":"heptadecane biosynthetic process","termid":"GO:1900636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heptadecane biosynthetic process","synonyms":[{"name":"activation of heptadecane anabolism","type":"narrow"},{"name":"activation of heptadecane biosynthesis","type":"narrow"},{"name":"activation of heptadecane biosynthetic process","type":"narrow"},{"name":"activation of heptadecane formation","type":"narrow"},{"name":"activation of heptadecane synthesis","type":"narrow"},{"name":"positive regulation of heptadecane anabolism","type":"related"},{"name":"positive regulation of heptadecane biosynthesis","type":"related"},{"name":"positive regulation of heptadecane formation","type":"related"},{"name":"positive regulation of heptadecane synthesis","type":"related"},{"name":"up regulation of heptadecane anabolism","type":"related"},{"name":"up regulation of heptadecane biosynthesis","type":"related"},{"name":"up regulation of heptadecane biosynthetic process","type":"exact"},{"name":"up regulation of heptadecane formation","type":"related"},{"name":"up regulation of heptadecane synthesis","type":"related"},{"name":"up-regulation of heptadecane anabolism","type":"related"},{"name":"up-regulation of heptadecane biosynthesis","type":"related"},{"name":"up-regulation of heptadecane biosynthetic process","type":"exact"},{"name":"up-regulation of heptadecane formation","type":"related"},{"name":"up-regulation of heptadecane synthesis","type":"related"},{"name":"upregulation of heptadecane anabolism","type":"related"},{"name":"upregulation of heptadecane biosynthesis","type":"related"},{"name":"upregulation of heptadecane biosynthetic process","type":"exact"},{"name":"upregulation of heptadecane formation","type":"related"},{"name":"upregulation of heptadecane synthesis","type":"related"}],"termid":"GO:1900898"}


id: PBO:0063454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 11A","termid":"PBO:0063454"}


id: GO:0004095
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: palmitoyl-CoA + L-carnitine = CoA + L-palmitoylcarnitine.","definition_xrefs":["EC:2.3.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine O-acyltransferase activity","termid":"GO:0016406"},{"relation_name":"is_a","term_name":"O-palmitoyltransferase activity","termid":"GO:0016416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"carnitine O-palmitoyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9911362","Reactome:R-HSA-200410","RHEA:12661","MetaCyc:CARNITINE-O-PALMITOYLTRANSFERASE-RXN","Reactome:R-HSA-200406"],"synonyms":[{"name":"CPT","type":"related"},{"name":"CPT I (outer membrane carnitine palmitoyl transferase)","type":"related"},{"name":"CPT-A","type":"related"},{"name":"CPT-B","type":"related"},{"name":"CPTi","type":"related"},{"name":"CPTo","type":"related"},{"name":"L-carnitine palmitoyltransferase activity","type":"related"},{"name":"acylcarnitine transferase activity","type":"related"},{"name":"carnitine palmitoyltransferase I","type":"related"},{"name":"carnitine palmitoyltransferase II","type":"related"},{"name":"carnitine palmitoyltransferase activity","type":"related"},{"name":"carnitine palmitoyltransferase-A","type":"related"},{"name":"outer malonyl-CoA inhibitable carnitine palmitoyltransferase activity","type":"related"},{"name":"palmitoyl-CoA:L-carnitine O-palmitoyltransferase activity","type":"related"},{"name":"palmitoylcarnitine transferase activity","type":"related"}],"termid":"GO:0004095"}


id: PBO:0040020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 8 pseudogene 1","termid":"PBO:0040020"}


id: MONDO:0009510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Laron syndrome with immunodeficiency (obsolete MONDO:0009510)","termid":"MONDO:0009510","xrefs":{"Monarch":{"xref_id":"0009510"}}}


id: MONDO:0007385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic spontaneous coronary artery dissection","secondary_identifiers":["UMLS:C1852540","GARD:10822","MEDGEN:377701","MESH:C565153","OMIM:122455","Orphanet:458718"],"synonyms":[{"name":"coronary artery dissection, spontaneous","type":"related"},{"name":"idiopathic SCAD","type":"exact"}],"termid":"MONDO:0007385","xrefs":{"Monarch":{"xref_id":"0007385"}}}


id: GO:1990144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to hypoxia (lowered oxygen tension). Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level. The pathway ends when the execution phase of apoptosis is triggered.","definition_xrefs":["GOC:mtg_apoptosis","PMID:20436456","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"},{"relation_name":"part_of","term_name":"cellular response to hypoxia","termid":"GO:0071456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to hypoxia","termid":"GO:1990144"}


id: PR:G2TRL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B2.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1B2.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.06","synonyms":[{"name":"Spom972h-SPAC1B2.06","type":"exact"}],"termid":"PR:G2TRL6"}


id: GO:0030271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage: Phe-Xaa > Tyr-Xaa > Trp-Xaa > Leu-Xaa.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chymase activity (obsolete GO:0030271)","synonyms":[{"name":"SK protease activity","type":"related"},{"name":"chymase activity","type":"exact"},{"name":"mast cell protease I activity","type":"narrow"},{"name":"mast cell serine proteinase","type":"narrow"},{"name":"skeletal muscle (SK) protease activity","type":"narrow"},{"name":"skeletal muscle protease","type":"narrow"},{"name":"skin chymotryptic proteinase","type":"narrow"}],"termid":"GO:0030271"}


id: GO:1990883
data:
  {"annotated_genes":["SJAG_01877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72715],"is_not":false,"summary":null,"term":"GO:1990883"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a cytidine in 18S rRNA + acetyl-CoA + ATP + H2O = an N(4)-acetylcytidine in 18S rRNA + ADP + phosphate + CoA + H+.","definition_xrefs":["PMID:25402480","RHEA:51424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01877":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"18S rRNA cytidine N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990883","terms_by_termid":{"GO:1990883":null}}


id: PATO:0001969
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having secondary branches terminating at the margin.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craspedodromous","termid":"PATO:0001969"}


id: GO:0045222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of CD4, a CD marker that occurs on T-helper cells and is involved in MHC class II restricted interactions.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete CD4 biosynthetic process (obsolete GO:0045222)","synonyms":[{"name":"CD4 anabolism","type":"exact"},{"name":"CD4 biosynthesis","type":"exact"},{"name":"CD4 formation","type":"exact"},{"name":"CD4 synthesis","type":"exact"}],"termid":"GO:0045222"}


id: GO:0009819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of prolonged deprivation of water that restores that organism to a normal (non-stressed) condition.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"drought recovery","synonyms":[{"name":"drought tolerance","type":"related"}],"termid":"GO:0009819"}


id: PBO:0051569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 15","termid":"PBO:0051569"}


id: MOD:00013
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-aspartic acid.","definition_xrefs":["PubMed:1097438","PubMed:5764436","PubMed:8089117","PubMed:9582379","RESID:AA0004","ChEBI:29958","PubMed:4399050","PubMed:339692","PubMed:6692818","PubMed:9521123","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid residue","synonyms":[{"name":"(2S)-2-aminobutanedioic acid","type":"exact"},{"name":"2-azanylbutanedioic acid","type":"exact"},{"name":"Asp","type":"exact"},{"name":"L-aspartic acid","type":"exact"},{"name":"aminosuccinic acid","type":"exact"}],"termid":"MOD:00013"}


id: GO:1900028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ruffle assembly.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"},{"relation_name":"is_a","term_name":"regulation of ruffle assembly","termid":"GO:1900027"},{"relation_name":"negatively_regulates","term_name":"ruffle assembly","termid":"GO:0097178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ruffle assembly","synonyms":[{"name":"down regulation of membrane ruffle formation","type":"exact"},{"name":"down regulation of membrane ruffling","type":"exact"},{"name":"down regulation of ruffle assembly","type":"related"},{"name":"negative regulation of membrane ruffle formation","type":"exact"},{"name":"negative regulation of membrane ruffling","type":"exact"}],"termid":"GO:1900028"}


id: PBO:0003158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase Ada1 (predicted)","termid":"PBO:0003158"}


id: _global:evidence_for_feature
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"B is evidence_for_feature A, if an instance of B supports the existence of A.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"evidence_for_feature","termid":"_global:evidence_for_feature"}


id: GO:0030988
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as a receptor for high molecular weight kininogens. In humans, this receptor includes the CK1 and uPAR proteins.","definition_xrefs":["PMID:11290596","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"high molecular weight kininogen receptor complex","termid":"GO:0030988"}


id: MONDO:0007324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chorea (obsolete MONDO:0007324)","termid":"MONDO:0007324","xrefs":{"Monarch":{"xref_id":"0007324"}}}


id: MONDO:0016452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic hypersomnia without long sleep time is a sleep disorder characterized almost entirely by constant excessive daytime drowsiness lasting more than 3 months, with involuntary more or less restorative daytime naps. Night rest is of normal length or slightly prolonged but is less than 10 hours in duration, with often normal awakening.","definition_xrefs":["Orphanet:228318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic hypersomnia","termid":"MONDO:0018044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic hypersomnia without long sleep time","secondary_identifiers":["UMLS:C1561855","ICD10CM:G47.12","ICD9:327.12","MEDGEN:736092","SCTID:442292004"],"termid":"MONDO:0016452","xrefs":{"Monarch":{"xref_id":"0016452"}}}


id: PBO:0088271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-3 adaptor complex subunit Apl5","termid":"PBO:0088271"}


id: PBO:0002302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin fold protein Plp1 (predicted)","termid":"PBO:0002302"}


id: MONDO:0021483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the frontal sinus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"frontal sinus neoplasm","termid":"MONDO:0001757"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of frontal sinus","secondary_identifiers":["NCIT:C4420","SCTID:92115005","icd11.foundation:399551439","ICD9:212.0","MEDGEN:87510","UMLS:C0345674"],"synonyms":[{"name":"benign frontal sinus neoplasm","type":"exact"},{"name":"benign frontal sinus tumor","type":"exact"},{"name":"benign frontal sinus tumour","type":"exact"},{"name":"benign neoplasm of the frontal sinus","type":"exact"},{"name":"benign tumor of frontal sinus","type":"exact"},{"name":"benign tumor of the frontal sinus","type":"exact"},{"name":"benign tumour of frontal sinus","type":"exact"},{"name":"benign tumour of the frontal sinus","type":"exact"},{"name":"frontal sinus benign neoplasm","type":"exact"}],"termid":"MONDO:0021483","xrefs":{"Monarch":{"xref_id":"0021483"}}}


id: GO:0035864
data:
  {"annotated_genes":["SJAG_01233"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035865"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a potassium ion stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to potassium ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to K+ ion","type":"exact"},{"name":"response to potassium","type":"exact"}],"termid":"GO:0035864","terms_by_termid":{"GO:0035865":null}}


id: GO:0060044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle cell proliferation.","definition_xrefs":["GOC:dph","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle tissue growth","termid":"GO:0055022"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell proliferation","termid":"GO:0060043"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell proliferation","termid":"GO:0060038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle cell proliferation","synonyms":[{"name":"negative regulation of heart muscle cell proliferation","type":"exact"}],"termid":"GO:0060044"}


id: GO:0006549
data:
  {"annotated_genes":["SJAG_04098","SJAG_03985","SJAG_06635","SJAG_00396","SJAG_00107","SJAG_04149","SJAG_00830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104119,108685,103636,111473,113637,91010,110806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901705"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving isoleucine, (2R*,3R*)-2-amino-3-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain amino acid metabolic process","termid":"GO:0009081"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00396":null,"SJAG_00830":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"isoleucine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"isoleucine metabolism","type":"exact"}],"termid":"GO:0006549","terms_by_termid":{"GO:1901705":null}}


id: GO:0072320
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a volume-sensitive channel. A volume-sensitive channel is a channel that responds to changes in the volume of a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"volume-sensitive anion channel activity","termid":"GO:0005225"},{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"volume-sensitive chloride channel activity","synonyms":[{"name":"swell-activated chloride channel","type":"related"}],"termid":"GO:0072320"}


id: PBO:0077597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 9","termid":"PBO:0077597"}


id: GO:0004061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formyl-L-kynurenine + H2O = formate + L-kynurenine.","definition_xrefs":["EC:3.5.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"arylformamidase activity","secondary_identifiers":["MetaCyc:ARYLFORMAMIDASE-RXN","Reactome:R-HSA-71189","RHEA:13009"],"synonyms":[{"name":"aryl-formylamine amidohydrolase activity","type":"related"},{"name":"formamidase I","type":"related"},{"name":"formamidase II","type":"related"},{"name":"formylase activity","type":"related"},{"name":"formylkynureninase activity","type":"related"},{"name":"formylkynurenine formamidase activity","type":"related"},{"name":"kynurenine formamidase activity","type":"related"}],"termid":"GO:0004061"}


id: PR:O14218
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6B12.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 phosphatases regulator ypi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.13","synonyms":[{"name":"Spom972h-SPAC6B12.13","type":"exact"}],"termid":"PR:O14218"}


id: PBO:0067715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 13","termid":"PBO:0067715"}


id: GO:0090731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a very-low-density lipoprotein particle stimulus.","definition_xrefs":["GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipoprotein particle","termid":"GO:0055094"},{"relation_name":"is_a","term_name":"cellular response to lipoprotein particle stimulus","termid":"GO:0071402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to very-low-density lipoprotein particle stimulus","synonyms":[{"name":"cellular response to VLDL particle stimulus","type":"exact"}],"termid":"GO:0090731"}


id: GO:0008490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arsenite from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arsenite transmembrane transporter activity","termid":"GO:0015105"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"arsenite secondary active transmembrane transporter activity","secondary_identifiers":["GO:0008491"],"synonyms":[{"name":"arsenite porter activity","type":"related"}],"termid":"GO:0008490"}


id: MONDO:0000428
data:
  {"annotated_genes":["SJAG_01926"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0027048"}]},"cv_name":"mondo","definition":"Y-linked form of disease.","definition_xrefs":["MONDO:patterns/y_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01926":null},"genotype_count":0,"is_obsolete":false,"name":"Y-linked disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D050174","MEDGEN:289655","DOID:0050738","UMLS:C1563751"],"synonyms":[{"name":"Y linked genetic diseases","type":"related"},{"name":"Y-linked disease or disorder","type":"exact"},{"name":"Y-linked genetic disease","type":"related"},{"name":"Y-linked genetic diseases","type":"related"},{"name":"disease or disorder, Y-linked","type":"exact"},{"name":"disease, Y-linked","type":"exact"},{"name":"disease, Y-linked genetic","type":"related"},{"name":"diseases, Y-linked genetic","type":"related"},{"name":"genetic disease, Y-linked","type":"related"},{"name":"genetic diseases, Y chromosome linked","type":"related"},{"name":"genetic diseases, Y linked","type":"related"},{"name":"genetic diseases, Y-chromosome linked","type":"related"}],"termid":"MONDO:0000428","terms_by_termid":{"MONDO:0027048":null},"xrefs":{"Monarch":{"xref_id":"0000428"}}}


id: GO:0044272
data:
  {"annotated_genes":["SJAG_02421","SJAG_04282","SJAG_01970","SJAG_00395","SJAG_03731","SJAG_04866","SJAG_03712","SJAG_04459","SJAG_03198","SJAG_01351","SJAG_00988","SJAG_02006","SJAG_00881","SJAG_02769","SJAG_03659","SJAG_00427","SJAG_03064","SJAG_00309","SJAG_03553","SJAG_01880","SJAG_03313","SJAG_04067","SJAG_02290","SJAG_04425","SJAG_01466","SJAG_03152","SJAG_00582","SJAG_03494","SJAG_00827","SJAG_02293","SJAG_03671","SJAG_02420","SJAG_03538","SJAG_00381","SJAG_01139","SJAG_03310","SJAG_00832","SJAG_02741","SJAG_00866","SJAG_03881","SJAG_03362","SJAG_04627","SJAG_02158","SJAG_02689","SJAG_04288","SJAG_03614","SJAG_03290","SJAG_01271","SJAG_05277","SJAG_04007","SJAG_01402","SJAG_03856","SJAG_02599","SJAG_02972","SJAG_00673","SJAG_04305","SJAG_02406","SJAG_01404","SJAG_01935","SJAG_04042"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65632,68792,106354,111468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[98703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[68906,91766],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[117441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[79680,76715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[89699,78925,80289,71511,71985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[110879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019344"},{"annotations":[60429,66479,76501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[103968,111914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[77670,108799,79115,57802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[110880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[101009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[58782,79562,78657,77258,78207,80442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[98854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"},{"annotations":[75491,97494,98194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[107838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[66301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[79378,71441,72250,112349,74901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[89361,114066],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[79394,73123,88175,87747,73753,74983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[75467],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[75504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006556"},{"annotations":[61749,74374,78761,77495,70555,74295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[113978,116409,67721,66037,78568,113972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[99861,110820,110819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"},{"annotations":[74108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052837"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"biosynthetic 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compound biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"sulfur biosynthesis","type":"narrow"},{"name":"sulfur biosynthetic process","type":"narrow"},{"name":"sulfur compound anabolism","type":"exact"},{"name":"sulfur compound biosynthesis","type":"exact"},{"name":"sulfur compound formation","type":"exact"},{"name":"sulfur compound synthesis","type":"exact"}],"termid":"GO:0044272","terms_by_termid":{"GO:0006085":null,"GO:0006086":null,"GO:0006535":null,"GO:0006556":null,"GO:0006750":null,"GO:0009086":null,"GO:0009102":null,"GO:0009107":null,"GO:0009228":null,"GO:0009229":null,"GO:0010510":null,"GO:0015937":null,"GO:0019280":null,"GO:0019284":null,"GO:0019344":null,"GO:0019427":null,"GO:0019509":null,"GO:0035338":null,"GO:0036172":null,"GO:0052699":null,"GO:0052837":null,"GO:0071266":null,"GO:0071269":null,"GO:0090180":null,"GO:1990181":null,"GO:2001295":null}}


id: FYPO:0000965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere outer repeat regions is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0000788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone H3-K14 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abnormal histone H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"abnormal histone H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abnormal histone H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000965"}


id: PBO:0108895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 8","termid":"PBO:0108895"}


id: PBO:0055360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2789","termid":"PBO:0055360"}


id: PBO:0088420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol transfer protein Osh3","termid":"PBO:0088420"}


id: MONDO:0045036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A characteristic of an infectious disease in which the disease affects an immunologically normal host.","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease characteristic","termid":"MONDO:0045034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary infectious","termid":"MONDO:0045036","xrefs":{"Monarch":{"xref_id":"0045036"}}}


id: PBO:0110391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTMR9 pseudogene 1","termid":"PBO:0110391"}


id: PBO:0049053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 52","termid":"PBO:0049053"}


id: PBO:0050329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 31","termid":"PBO:0050329"}


id: GO:1904507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomere maintenance in response to DNA damage.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:BHF_telomere","GO_REF:0000058","GOC:nc","PMID:22579284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance in response to DNA damage","termid":"GO:1904505"},{"relation_name":"positively_regulates","term_name":"telomere maintenance in response to DNA damage","termid":"GO:0043247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259"],"is_obsolete":false,"name":"positive regulation of telomere maintenance in response to DNA damage","synonyms":[{"name":"activation of DNA damage response, telomere maintenance","type":"narrow"},{"name":"activation of telomere maintenance in response to DNA damage","type":"narrow"},{"name":"positive regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"up-regulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"up-regulation of telomere maintenance in response to DNA damage","type":"exact"},{"name":"upregulation of DNA damage response, telomere maintenance","type":"exact"},{"name":"upregulation of telomere maintenance in response to DNA damage","type":"exact"}],"termid":"GO:1904507"}


id: PBO:0072334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 20","termid":"PBO:0072334"}


id: GO:0102346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxycerotoyl-CoA(4-) = trans-2-hexacosenoyl-CoA(4-) + H2O.","definition_xrefs":["EC:4.2.1.134","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-cerotoyl-CoA dehydratase activity (obsolete GO:0102346)","termid":"GO:0102346"}


id: GO:0072551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diferuloyl mono-(hydroxyferuloyl) spermidine + NADPH + O2 = monoferuloyl di-(hydroxyferuloyl) spermidine + NADP+ + H2O.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"diferuloyl mono-(hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072551"}


id: PBO:0069410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 670, pseudogene","termid":"PBO:0069410"}


id: GO:0038169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by somatostatin binding to the somatostatin receptor (SSTR) on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:8769369","PMID:18006219","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"somatostatin receptor signaling pathway","synonyms":[{"name":"SST receptor signaling pathway","type":"exact"},{"name":"SSTR signaling pathway","type":"related"}],"termid":"GO:0038169"}


id: GO:1905705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a paclitaxel stimulus.","definition_xrefs":["PMID:18472094","GOC:TermGenie","GO_REF:0000071"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to paclitaxel (obsolete GO:1905705)","termid":"GO:1905705"}


id: GO:0018048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-proline amide by hydrolysis and oxidation of an interior Pro-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0095"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-proline amidation (obsolete GO:0018048)","termid":"GO:0018048"}


id: PBO:0077426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 163","termid":"PBO:0077426"}


id: PBO:0063461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor C","termid":"PBO:0063461"}


id: MONDO:0010165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulna hypoplasia - intellectual deficit is a very rare syndrome characterized by mesomelic shortness of the forearms, bilateral clubfeet, aplasia or hypoplasia of all nails and severe psychomotor retardation.","definition_xrefs":["Orphanet:2249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"ulna hypoplasia-intellectual disability syndrome","secondary_identifiers":["OMIM:276821","GARD:5398","MESH:C564757","MEDGEN:341275","UMLS:C1848650"],"synonyms":[{"name":"bilateral ulnar hypoplasia and intellectual disability","type":"related"},{"name":"bilateral ulnar hypoplasia and mental retardation","type":"related"},{"name":"mesomelia of the upper limbs, absent nails, clubfeet, and intellectual disability","type":"related"},{"name":"mesomelia of the upper limbs, absent nails, clubfeet, and mental retardation","type":"related"},{"name":"mesomelia of the upper limbs, anonychia congenita, clubfeet, and intellectual disability","type":"related"},{"name":"mesomelia of the upper limbs, anonychia congenita, clubfeet, and mental retardation","type":"related"},{"name":"ulna hypoplasia with intellectual disability","type":"related"},{"name":"ulna hypoplasia with mental retardation","type":"related"},{"name":"ulnar hypoplasia with intellectual disability","type":"related"},{"name":"ulnar hypoplasia with mental retardation","type":"related"}],"termid":"MONDO:0010165","xrefs":{"Monarch":{"xref_id":"0010165"}}}


id: GO:0035783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment CD4-positive, alpha-beta T cell activation.","definition_xrefs":["GOC:BHF","GOC:pr","CL:0000624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell costimulation","termid":"GO:0031295"},{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"CD4-positive, alpha-beta T cell costimulation","synonyms":[{"name":"CD4-positive, alpha beta T cell costimulation","type":"exact"}],"termid":"GO:0035783"}


id: GO:0010338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a leaf. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"is_a","term_name":"plant organ formation","termid":"GO:1905393"},{"relation_name":"part_of","term_name":"leaf morphogenesis","termid":"GO:0009965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leaf formation","termid":"GO:0010338"}


id: MONDO:0000584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete B cell linker protein deficiency (obsolete MONDO:0000584)","termid":"MONDO:0000584","xrefs":{"Monarch":{"xref_id":"0000584"}}}


id: PBO:0108604
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-indirectly_negatively_regulates","termid":"PBO:0108604"}


id: PBO:0073179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein K pseudogene 1","termid":"PBO:0073179"}


id: GO:0120239
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The carbohydrate-rich layer lining the vascular endothelium connected to the endothelium through a variety of molecules, mainly proteoglycans and glycoproteins. These form a network in which soluble molecules, either plasma- or endothelium-derived, are incorporated.","definition_xrefs":["GOC:krc","PMID:17256154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycocalyx","termid":"GO:0030112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vascular endothelial glycocalyx","synonyms":[{"name":"endothelial glycocalyx","type":"exact"}],"termid":"GO:0120239"}


id: PBO:0000454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DHHC type","termid":"PBO:0000454"}


id: PBO:0064002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 36","termid":"PBO:0064002"}


id: GO:0071314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cocaine stimulus. Cocaine is a crystalline alkaloid obtained from the leaves of the coca plant.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cocaine","termid":"GO:0042220"},{"relation_name":"is_a","term_name":"cellular response to alkaloid","termid":"GO:0071312"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cocaine","termid":"GO:0071314"}


id: GO:0031568
data:
  {"annotated_genes":["SJAG_01401","SJAG_03048","SJAG_00071","SJAG_01210","SJAG_03681"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89268,101961,102699,109258,116290],"is_not":false,"summary":null,"term":"GO:0031568"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell size control checkpoint during the G1/S transition of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell size control checkpoint signaling","termid":"GO:0031567"},{"relation_name":"is_a","term_name":"negative regulation of G1/S transition of mitotic cell cycle","termid":"GO:2000134"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_03048":null,"SJAG_03681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0044772","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mitotic G1 cell size control checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072450"],"synonyms":[{"name":"G1 cell size control checkpoint","type":"related"},{"name":"G1 cell size control checkpoint signalling","type":"related"},{"name":"mitotic G1 cell size control checkpoint","type":"exact"},{"name":"mitotic cell cycle G1/S transition size control checkpoint","type":"exact"},{"name":"signal transduction involved in G1 cell size control checkpoint","type":"related"},{"name":"signal transduction involved in mitotic cell cycle G1/S transition size control checkpoint","type":"related"}],"termid":"GO:0031568","terms_by_termid":{"GO:0031568":null}}


id: FYPO:0006915
data:
  {"alleles_by_uniquename":{"SJAG_00601:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00601","name":"rip1delta","uniquename":"SJAG_00601:allele-1"},"SJAG_01355:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01355","name":"cox6delta","uniquename":"SJAG_01355:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"},{"annotations":[120025,120022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000590"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell executes a cell cycle process normally (i.e. indistinguishably from wild type). A cell cycle process is any of the processes that form part of the cell cycle, and thereby ensures successive accurate and complete genome replication and chromosome segregation.","definition_xrefs":["GO:0022402","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle","termid":"FYPO:0003832"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00601":null,"SJAG_01355":null,"SJAG_04883":null},"genotype_count":3,"genotypes_by_uniquename":{"cox6delta":{"display_name":"cox6delta","display_uniquename":"cox6delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01355:allele-1","expression":"Null"}]}]},"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]},"rip1delta":{"display_name":"rip1delta","display_uniquename":"rip1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00601:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell cycle process","references_by_uniquename":{"PMID:36695178":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_04883","SJAG_01355","SJAG_00601"],"single_locus_genotype_uniquenames":["rip1delta","cox6delta","ptp4delta"],"termid":"FYPO:0006915","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000590":null,"FYPO:0001007":null}}


id: MONDO:0004350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinoblastoma during childhood that has spread beyond the eye.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extraocular retinoblastoma","termid":"MONDO:0003078"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"pediatric extraocular retinoblastoma","secondary_identifiers":["DOID:7747","MEDGEN:230837","NCIT:C9048","UMLS:C1321870"],"synonyms":[{"name":"childhood extraocular retinoblastoma","type":"exact"},{"name":"childhood metastatic retinoblastoma","type":"exact"},{"name":"extraocular retinoblastoma","type":"broad"},{"name":"extraocular retinoblastoma of childhood","type":"exact"},{"name":"pediatric extraocular retinoblastoma","type":"exact"}],"termid":"MONDO:0004350","xrefs":{"Monarch":{"xref_id":"0004350"}}}


id: GO:0002026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent of heart contraction, changing the force with which blood is propelled.","definition_xrefs":["GOC:dph","GOC:tb","PMID:10358008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the force of heart contraction","synonyms":[{"name":"cardiac inotropy","type":"exact"},{"name":"heart inotropy","type":"exact"}],"termid":"GO:0002026"}


id: GO:0042697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cessation of menstruation, occurring in (e.g.) the human female usually around the age of 50.","definition_xrefs":["PMID:18495681","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menstrual cycle phase","termid":"GO:0022601"},{"relation_name":"is_a","term_name":"reproductive senescence","termid":"GO:1990636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menopause","secondary_identifiers":["Wikipedia:Menopause"],"termid":"GO:0042697"}


id: PBO:0066609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHOXF1 antisense RNA 1","termid":"PBO:0066609"}


id: GO:0006832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete small molecule transport (obsolete GO:0006832)","synonyms":[{"name":"small molecule transport","type":"exact"}],"termid":"GO:0006832"}


id: PBO:0052415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, three Ig domains pseudogene 1","termid":"PBO:0052415"}


id: MONDO:0012539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the TMEM67 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 6","secondary_identifiers":["UMLS:C1853153","OMIM:610688","MEDGEN:342805","GARD:15494","DOID:0111001","MESH:C537689"],"synonyms":[{"name":"JBTS6","type":"exact"},{"name":"Joubert syndrome 6","type":"exact"},{"name":"Joubert syndrome caused by mutation in TMEM67","type":"exact"},{"name":"Joubert syndrome type 6","type":"exact"},{"name":"TMEM67 Joubert syndrome","type":"exact"}],"termid":"MONDO:0012539","xrefs":{"Monarch":{"xref_id":"0012539"}}}


id: PBO:0031478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_actin_cortical_patch","termid":"PBO:0031478"}


id: MONDO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete agammaglobulinemia (obsolete MONDO:0002349)","termid":"MONDO:0002349","xrefs":{"Monarch":{"xref_id":"0002349"}}}


id: PBO:0076964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 1 pseudogene 1","termid":"PBO:0076964"}


id: PBO:0082239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-SNAP cochaperone; SNARE-complex adaptor for Sec18 (NSF) during the disassembly of postfusion cis-SNARE complexes; stimulates the ATPase activity of Sec18p; peripheral membrane protein required for vesicular transport between ER and Golgi, the 'priming' step in homotypic vacuole fusion, and autophagy; similar to mammalian alpha-SNAP","termid":"PBO:0082239"}


id: MONDO:0006123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well circumscribed benign tumor arising from cardiac muscle. It usually affects children and may be present in the fetus. Depending on tumor location and size, cardiac, respiratory, and hemodynamic parameters may be affected. There is an association between cardiac rhabdomyoma and tuberous sclerosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm of heart","termid":"MONDO:0021450"},{"relation_name":"is_a","term_name":"rhabdomyoma","termid":"MONDO:0036688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac rhabdomyoma","secondary_identifiers":["HP:0009729","UMLS:C1332852","EFO:1000150","NCIT:C6739","MEDGEN:232027"],"synonyms":[{"name":"cardiac rhabdomyoma","type":"exact"},{"name":"cardiac rhabdomyoma (disease)","type":"exact"},{"name":"heart rhabdomyoma","type":"exact"},{"name":"rhabdomyoma of heart","type":"exact"},{"name":"rhabdomyoma of the heart","type":"exact"}],"termid":"MONDO:0006123","xrefs":{"Monarch":{"xref_id":"0006123"}}}


id: PBO:0081071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 4","termid":"PBO:0081071"}


id: MONDO:0016367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatomyositis (DM) is a type of idiopathic inflammatory myopathy characterized by evocative skin lesions and symmetrical proximal muscle weakness.","definition_xrefs":["Orphanet:221"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic disease with skin involvement (obsolete MONDO:0017368)","termid":"MONDO:0017368"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"polymyositis","termid":"MONDO:0019127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005336"],"is_obsolete":false,"name":"dermatomyositis","secondary_identifiers":["DOID:10223","GARD:6263","icd11.foundation:739030149","MEDGEN:8331","NANDO:1200274","EFO:0000398","MedDRA:10012503","ICD9:710.3","NORD:1048","MESH:D003882","NCIT:C26744","UMLS:C0011633","SCTID:396230008"],"synonyms":[{"name":"Amyopathic dermatomyositis","type":"related"},{"name":"DM","type":"exact"},{"name":"adult dermatomyositis","type":"narrow"},{"name":"dermatomyositis","type":"exact"},{"name":"dermatopolymyositis","type":"exact"},{"name":"polymyositis with skin involvement","type":"exact"}],"termid":"MONDO:0016367","xrefs":{"Monarch":{"xref_id":"0016367"}}}


id: GO:0034886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gamma-aminovinylacetate + H2O = succinic semialdehyde + NH3.","definition_xrefs":["UM-BBD_reactionID:r1351"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-aminovinylacetate deaminase activity (obsolete GO:0034886)","termid":"GO:0034886"}


id: PBO:0087884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor; recruits the Cyc8p-Tup1p complex to promoters; mediates glucose repression and negatively regulates a variety of processes including filamentous growth and alkaline pH response; activated in stochastic pulses of nuclear localization in response to low glucose","termid":"PBO:0087884"}


id: FYPO:0004815
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of siRNA derived from antisense transcription of ribosomal DNA measured in a cell is greater than normal.","definition_xrefs":["PMID:25417108","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased antisense RNA level","termid":"FYPO:0003557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased rDNA antisense siRNA level","synonyms":[{"name":"increased accumulation of rDNA antisense small RNAs","type":"related"},{"name":"increased antisense small RNA at rDNA","type":"exact"},{"name":"increased antisense transcription-derived small RNA level at rDNA","type":"exact"},{"name":"increased rDNA antisense small RNA accumulation","type":"related"},{"name":"increased rDNA antisense small RNA level during mitotic cell cycle","type":"related"},{"name":"increased rDNA antisense small RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0004815"}


id: PBO:0034111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_immediately_downstream_of_sequence_of","termid":"PBO:0034111"}


id: PBO:0030520
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_purvalanol_A","termid":"PBO:0030520"}


id: MONDO:0000387
data:
  {"annotated_genes":["SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008787"}]},"cv_name":"mondo","definition":"Anemia in which the circulating RBCs are smaller than the usual size of RBCs (microcytic) and have decreased red color (hypochromic).","direct_ancestors":[{"relation_name":"is_a","term_name":"microcytic anemia","termid":"MONDO:0001245"},{"relation_name":"is_a","term_name":"hypochromic anemia","termid":"MONDO:0001357"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"hypochromic microcytic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050642","HP:0004840","SCTID:44666001","UMLS:C0271901","MEDGEN:124413","MESH:C536357"],"synonyms":[{"name":"hypochromic microcytic anaemia (disease)","type":"exact"},{"name":"hypochromic microcytic anemia","type":"exact"},{"name":"hypochromic microcytic anemia (disease)","type":"exact"}],"termid":"MONDO:0000387","terms_by_termid":{"MONDO:0008787":null},"xrefs":{"Monarch":{"xref_id":"0000387"}}}


id: GO:1905765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protection from non-homologous end joining at telomere.","definition_xrefs":["GOC:BHF","PMID:14690602","GOC:BHF_telomere","GOC:TermGenie","GO_REF:0000058","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of telomere capping","termid":"GO:1904354"},{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance in response to DNA damage","termid":"GO:1904506"},{"relation_name":"is_a","term_name":"regulation of protection from non-homologous end joining at telomere","termid":"GO:1905764"},{"relation_name":"negatively_regulates","term_name":"protection from non-homologous end joining at telomere","termid":"GO:0031848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0032200","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protection from non-homologous end joining at telomere","synonyms":[{"name":"down regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"down regulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"down-regulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"down-regulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"downregulation of protection from NHEJ-mediated telomere fusion","type":"exact"},{"name":"downregulation of protection from non-homologous end joining at telomere","type":"exact"},{"name":"inhibition of protection from NHEJ-mediated telomere fusion","type":"narrow"},{"name":"inhibition of protection from non-homologous end joining at telomere","type":"narrow"},{"name":"negative regulation of protection from NHEJ-mediated telomere fusion","type":"exact"}],"termid":"GO:1905765"}


id: PBO:0117386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like domain 4, phospholipase and triacylglycerol lipase","termid":"PBO:0117386"}


id: MONDO:1012697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any demyelinating disease that occurs in calves of the Limousin breed of cattle and is characterized by progressively severe forelimb hypermetria, blindness, behavioural abnormalities and multifocal white matter vacuolation and demyelination.","definition_xrefs":["PMID:2375709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"demyelinating disease, non-human animal","termid":"MONDO:1012987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"demyelinating disorder, Limousin cattle","secondary_identifiers":["OMIA:001489-9913"],"termid":"MONDO:1012697","xrefs":{"Monarch":{"xref_id":"1012697"}}}


id: PBO:0069502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 769, pseudogene","termid":"PBO:0069502"}


id: MONDO:0002587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thymoma that is confined within the capsule and may display benign or malignant morphologic characteristics.","definition_xrefs":["NCIT:C7386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymoma","termid":"MONDO:0006456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"encapsulated thymoma","secondary_identifiers":["UMLS:C1333383","DOID:3278","MEDGEN:232452"],"synonyms":[{"name":"encapsulated thymoma","type":"exact"}],"termid":"MONDO:0002587","xrefs":{"Monarch":{"xref_id":"0002587"}}}


id: MONDO:0019037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare late-onset neurodegenerative disease characterized by supranuclear gaze palsy, postural instability, progressive rigidity, and mild dementia.","definition_xrefs":["Orphanet:683"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"excluded_subClassOf","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"supranuclear oculomotor palsy","termid":"MONDO:0020257"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"progressive supranuclear palsy","secondary_identifiers":["SCTID:28978003","MESH:D013494","GARD:7471","UMLS:C0038868","MEDGEN:21026","icd11.foundation:1493396558","NCIT:C85028","SCTID:192976002","DOID:678","NORD:1619","NANDO:1200009","ICD9:333.0","MedDRA:10036813","OMIMPS:601104"],"synonyms":[{"name":"PSP syndrome","type":"exact"},{"name":"Steele-Richardson-Olszewski disease","type":"exact"},{"name":"Steele-Richardson-Olszewski syndrome","type":"exact"},{"name":"familial progressive supranuclear palsy (type)","type":"related"},{"name":"progressive supranuclear ophthalmoplegia","type":"exact"},{"name":"supranuclear palsy, progressive","type":"related"}],"termid":"MONDO:0019037","xrefs":{"Monarch":{"xref_id":"0019037"}}}


id: MONDO:0004730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term referring to disorders characterized by the disruption of normal speech. It includes stuttering, lisps, dysarthria and voice disorders.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"communication disorder","termid":"MONDO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speech disorder","secondary_identifiers":["UMLS:C0037822","MESH:D013064","ICD9:784.49","ICD9:784.40","NCIT:C5041","SCTID:47004009","DOID:92","MEDGEN:11531"],"synonyms":[{"name":"speech impediment or impairment","type":"exact"}],"termid":"MONDO:0004730","xrefs":{"Monarch":{"xref_id":"0004730"}}}


id: MOD:01132
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:01165. Remap to MOD:01165.","definition_xrefs":["DeltaMass:0"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01132 5'phos Adenosinyl (obsolete MOD:01132)","termid":"MOD:01132"}


id: PBO:0119635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal, T cell differentiation protein (MAL blood group)","termid":"PBO:0119635"}


id: PBO:0084411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"m(7)GpppX pyrophosphatase regulator; non-essential, stress induced regulatory protein; modulates m7G-oligoribonucleotide metabolism; inhibits Dcs1p; regulated by Msn2p, Msn4p, and the Ras-cAMP-cAPK signaling pathway; mutant has increased aneuploidy tolerance; DCS2 has a paralog, DCS1, that arose from the whole genome duplication","termid":"PBO:0084411"}


id: MONDO:0021418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the ethmoid sinus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus disorder","termid":"MONDO:0001735"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyp of ethmoidal sinus","secondary_identifiers":["UMLS:C0264248","NCIT:C3932","ICD9:471.8","MEDGEN:82675","SCTID:23966000"],"synonyms":[{"name":"ethmoid sinus polyp","type":"exact"},{"name":"ethmoidal polyp","type":"exact"},{"name":"ethmoidal sinus polyp","type":"exact"},{"name":"polyp of ethmoid sinus","type":"exact"},{"name":"polyp of the ethmoid sinus","type":"exact"},{"name":"polyp of the ethmoidal sinus","type":"exact"}],"termid":"MONDO:0021418","xrefs":{"Monarch":{"xref_id":"0021418"}}}


id: PBO:0042186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B3","termid":"PBO:0042186"}


id: PBO:0066235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 43","termid":"PBO:0066235"}


id: PBO:0072845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2","termid":"PBO:0072845"}


id: GO:0001756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"chordate embryonic development","termid":"GO:0043009"},{"relation_name":"part_of","term_name":"somite development","termid":"GO:0061053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somitogenesis","secondary_identifiers":["Reactome:R-HSA-9824272","Wikipedia:Somitogenesis"],"synonyms":[{"name":"formation of mesodermal clusters","type":"exact"}],"termid":"GO:0001756"}


id: MONDO:0002223
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant mesothelial neoplasm that usually involves both the ovarian surface and the ovarian stroma. In most cases there is bilateral ovarian involvement.","definition_xrefs":["NCIT:C40444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant mesothelioma","termid":"MONDO:0006292"},{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian malignant mesothelioma","secondary_identifiers":["UMLS:C1518721","MEDGEN:274089","DOID:2143"],"synonyms":[{"name":"malignant mesothelioma (disease) of ovary","type":"exact"},{"name":"ovarian malignant mesothelioma","type":"exact"},{"name":"ovary malignant mesothelioma (disease)","type":"exact"}],"termid":"MONDO:0002223","xrefs":{"Monarch":{"xref_id":"0002223"}}}


id: PBO:0061230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-POU domain containing, octamer-binding pseudogene 2","termid":"PBO:0061230"}


id: PBO:0083853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; predicted to contain both S1 and KH RNA binding domains; mutations in the human homolog, EXOSC3, cause pontocerebellar hypoplasia with motor neuron degeneration","termid":"PBO:0083853"}


id: MONDO:0016766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Lichen planus (LP) is a common inflammatory dermatosis characterized by the development of pruritic violaceous papules or plaques on mucocutaneous surfaces. Eruptions can involve the face, neck, limbs, back, genitalia, tongue, buccal mucosa, nails, and scalp. LP comprises rare variants affecting the skin and the mucosa. Rare cutaneous LP includes linear LP (referring to blaschkoid and zosteriform distributions of lichenoid lesions), actinic LP, annular LP, atrophic LP, annular atrophic LP, lichen planopilaris (comprising Graham Little-Piccardi-Lassueur syndrome and frontal fibrosing alopecia), lichen planus pigmentosus, and lichen planus pemphigoides. Rare mucosal LP includes vulvovaginal gingival syndrome and LP sialadenitis.","definition_xrefs":["Orphanet:254367"],"gene_count":0,"genotype_count":0,"name":"obsolete rare lichen planus (obsolete MONDO:0016766)","synonyms":[{"name":"rare LP","type":"exact"},{"name":"rare lichen planus","type":"exact"}],"termid":"MONDO:0016766","xrefs":{"Monarch":{"xref_id":"0016766"}}}


id: PBO:0062112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 11","termid":"PBO:0062112"}


id: GO:0047711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: blasticidin S + H2O = deaminohydroxyblasticidin S + NH3.","definition_xrefs":["MetaCyc:BLASTICIDIN-S-DEAMINASE-RXN","EC:3.5.4.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"blasticidin-S deaminase activity","secondary_identifiers":["RHEA:10148"],"synonyms":[{"name":"blasticidin-S aminohydrolase activity","type":"related"}],"termid":"GO:0047711"}


id: PBO:0080957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 1","termid":"PBO:0080957"}


id: RO:0002502
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"depends_on","termid":"RO:0002502"}


id: MONDO:0004544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade II, usually recurring meningioma characterized by the predominance of tissues that are histologically similar to chordoma.","definition_xrefs":["NCIT:C6908"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"clear cell meningioma","termid":"MONDO:0002918"},{"relation_name":"is_a","term_name":"grade II meningioma","termid":"MONDO:0045056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chordoid meningioma","secondary_identifiers":["DOID:8368","UMLS:C1370510","MEDGEN:235089","ONCOTREE:CHOM"],"synonyms":[{"name":"CHOM","type":"related"},{"name":"chordoid meningioma","type":"exact"},{"name":"meningioma, chordoid","type":"exact"},{"name":"meningioma, chordoid (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004544","xrefs":{"Monarch":{"xref_id":"0004544"}}}


id: PBO:0000369
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses str2","termid":"PBO:0000369"}


id: GO:0009010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-sorbitol 6-phosphate + NAD+ = D-fructose 6-phosphate + NADH + H+.","definition_xrefs":["EC:1.1.1.140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sorbitol-6-phosphate 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:SORB6PDEHYDROG-RXN","RHEA:19837"],"synonyms":[{"name":"D-glucitol-6-phosphate dehydrogenase activity","type":"related"},{"name":"D-sorbitol 6-phosphate dehydrogenase activity","type":"related"},{"name":"D-sorbitol-6-phosphate dehydrogenase activity","type":"related"},{"name":"D-sorbitol-6-phosphate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"glucitol-6-phosphate dehydrogenase activity","type":"related"},{"name":"ketosephosphate reductase activity","type":"related"},{"name":"sorbitol-6-P-dehydrogenase activity","type":"related"}],"termid":"GO:0009010"}


id: MONDO:0017607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Caudal regression sequence is a rare congenital malformation of the lower spinal segments associated with aplasia or hypoplasia of the sacrum and lumbar spine.","definition_xrefs":["Orphanet:3027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"caudal regression sequence","secondary_identifiers":["UMLS:C0300948","DOID:0080700","MEDGEN:81254","GARD:6007","icd11.foundation:269997265","MedDRA:10054842","NCIT:C124505","MedDRA:10068896","MedDRA:10059387","NORD:902"],"synonyms":[{"name":"Caudal Regression Syndrome","type":"exact"},{"name":"caudal dysplasia","type":"exact"},{"name":"sacral agenesis syndrome","type":"exact"},{"name":"sacral regression syndrome","type":"exact"}],"termid":"MONDO:0017607","xrefs":{"Monarch":{"xref_id":"0017607"}}}


id: GO:0045216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell-cell junction. A cell-cell junction is a specialized region of connection between two cells.","definition_xrefs":["GOC:ai","GOC:mah","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell junction organization","secondary_identifiers":["Reactome:R-HSA-421270"],"synonyms":[{"name":"cell-cell junction assembly and maintenance","type":"exact"},{"name":"cell-cell junction biogenesis","type":"related"},{"name":"cell-cell junction organisation","type":"exact"},{"name":"intercellular junction assembly and maintenance","type":"exact"}],"termid":"GO:0045216"}


id: PBO:0072144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 21","termid":"PBO:0072144"}


id: MONDO:0031166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular dystrophy, retinal","secondary_identifiers":["DOID:0070438","OMIMPS:136550"],"termid":"MONDO:0031166","xrefs":{"Monarch":{"xref_id":"0031166"}}}


id: SO:0001234
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a feature that has either intra-genome or intracellular mobility.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile","secondary_identifiers":["http://en.wikipedia.org/wiki/Mobile"],"termid":"SO:0001234"}


id: GO:0097452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which mediates interferon-gamma-induced transcript-selective translation inhibition in inflammation processes. The complex binds to stem loop-containing GAIT elements in the 3'-UTR of diverse inflammatory mRNAs and suppresses their translation by blocking the recruitment of the 43S ribosomal complex to m7G cap-bound eIF4G. In humans it includes RPL13A, EPRS, SYNCRIP and GAPDH; mouse complexes lack SYNCRIP.","definition_xrefs":["PMID:15479637","GOC:br","PMID:23071094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GAIT complex","synonyms":[{"name":"IFN-gamma-activated inhibitor of translation complex","type":"exact"},{"name":"gamma interferon-activated inhibitor of translation complex","type":"exact"}],"termid":"GO:0097452"}


id: MONDO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of rheumatic pericarditis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic pericarditis","termid":"MONDO:0024655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"chronic rheumatic pericarditis","secondary_identifiers":["SCTID:78069008","UMLS:C0155561","DOID:1869","icd11.foundation:1473004877","ICD9:393","MEDGEN:510021","ICD10CM:I09.2"],"synonyms":[{"name":"rheumatic pericarditis, chronic","type":"exact"}],"termid":"MONDO:0002133","xrefs":{"Monarch":{"xref_id":"0002133"}}}


id: GO:0060575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a columnar/cuboidal epithelial cell of the intestine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal epithelial cell differentiation","termid":"GO:0060575"}


id: GO:0034646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lipid monolayer that surrounds and encloses an organelle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"intracellular organelle","termid":"GO:0043229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"organelle-enclosing lipid monolayer","termid":"GO:0034646"}


id: GO:0070554
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 3, and a complexin (or orthologs thereof).","definition_xrefs":["PMID:8824312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-3-complexin complex","synonyms":[{"name":"SNARE complex (Stx3, Snap25, Vamp2, Cplx1)","type":"narrow"},{"name":"Stx3-Snap25-Vamp2-Cplx1 complex","type":"narrow"}],"termid":"GO:0070554"}


id: PBO:0085716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in SRP-independent targeting of substrates to the ER; component of an alternative ER targeting pathway that has partial functional redundancy with the GET pathway; preference for substrates with downstream transmembrane domains; interacts with Env10p/Snd2p and Pho88p/Snd3p; can compensate for loss of SRP; co-purifies with ribosomes; GFP-fusion protein localizes to the cytoplasm","termid":"PBO:0085716"}


id: FYPO:0002344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity phleomycin. Cells stop growing (and may die) at a concentration of phleomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to phleomycin","synonyms":[{"name":"hypersensitive to phleomycin","type":"exact"},{"name":"sensitive to phleomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to phleomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0002344"}


id: PBO:0081492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 385D","termid":"PBO:0081492"}


id: PBO:0027929
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-h+_specific_sterility","termid":"PBO:0027929"}


id: PBO:0114851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multi-pass membrane and CBS domain protein, magnesium extrusion factor","termid":"PBO:0114851"}


id: PBO:0003094
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homotetrameric","termid":"PBO:0003094"}


id: MONDO:0001885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prolapse of female genital organ","termid":"MONDO:0001592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral cystocele","secondary_identifiers":["MEDGEN:751516","UMLS:C2711750","ICD9:618.02","ICD10CM:N81.12","SCTID:441891001","DOID:14130"],"termid":"MONDO:0001885","xrefs":{"Monarch":{"xref_id":"0001885"}}}


id: GO:0042327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of addition of phosphate groups to a molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorylation","termid":"GO:0042325"},{"relation_name":"is_a","term_name":"positive regulation of phosphate metabolic process","termid":"GO:0045937"},{"relation_name":"positively_regulates","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphorylation","synonyms":[{"name":"activation of phosphorylation","type":"narrow"},{"name":"stimulation of phosphorylation","type":"narrow"},{"name":"up regulation of phosphorylation","type":"exact"},{"name":"up-regulation of phosphorylation","type":"exact"},{"name":"upregulation of phosphorylation","type":"exact"}],"termid":"GO:0042327"}


id: PBO:0080189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular endothelial growth factor B","termid":"PBO:0080189"}


id: PBO:0034579
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate_dehydrogenase_(NADP+)_activity","termid":"PBO:0034579"}


id: MONDO:0013425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the RPE65 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"RPE65-related recessive retinopathy","termid":"MONDO:0100368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 20","secondary_identifiers":["DOID:0110353","UMLS:C3151086","GARD:10404","MEDGEN:462436","OMIM:613794","ICD10CM:H35.5","MESH:C566718","HGNC:10294"],"synonyms":[{"name":"RP 20","type":"related"},{"name":"RP20","type":"exact"},{"name":"RPE65 retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa 20","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in RPE65","type":"exact"},{"name":"retinitis pigmentosa type 20","type":"exact"}],"termid":"MONDO:0013425","xrefs":{"Monarch":{"xref_id":"0013425"}}}


id: PBO:0082571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin deacetylase; together with Cda1p involved in the biosynthesis ascospore wall component, chitosan; required for proper rigidity of the ascospore wall","termid":"PBO:0082571"}


id: GO:0005710
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cell during metaphase. Typically, sister chromatids are held together at their centromeres and chromosomes are covered with a large number of molecules, including ribonucleoproteins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete metaphase chromosome (obsolete GO:0005710)","synonyms":[{"name":"metaphase chromosome","type":"exact"}],"termid":"GO:0005710"}


id: GO:0070061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the D- or L-enantiomer of fructose, the ketohexose arabino-hex-2-ulose.","definition_xrefs":["GOC:BHF","CHEBI:28757","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"fructose binding","termid":"GO:0070061"}


id: PBO:0073193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein W","termid":"PBO:0073193"}


id: FYPO:0006098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the cytoplasm is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to cytoplasm","synonyms":[{"name":"abnormal protein localisation to cytoplasm","type":"exact"},{"name":"abnormal protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0006098"}


id: GO:0045619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"is_a","term_name":"regulation of leukocyte differentiation","termid":"GO:1902105"},{"relation_name":"regulates","term_name":"lymphocyte differentiation","termid":"GO:0030098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte differentiation","synonyms":[{"name":"regulation of lymphocyte development","type":"related"}],"termid":"GO:0045619"}


id: PBO:0072594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radical S-adenosyl methionine domain containing 1","termid":"PBO:0072594"}


id: MONDO:0011988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary immunodeficiency characterized by neutrophilia with severe neutrophil dysfunction, leukocytosis, a predisposition to bacterial infections and poor wound healing, including an absence of pus in infected areas.","definition_xrefs":["Orphanet:183707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functional neutrophil defect","termid":"MONDO:0015978"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"neutrophil immunodeficiency syndrome","secondary_identifiers":["UMLS:C1842398","DOID:0112064","MESH:C564275","GARD:17087","OMIM:608203","MEDGEN:374920","SCTID:723443003","icd11.foundation:1459690929"],"synonyms":[{"name":"immunodeficiency 73A with defective neutrophil chemotaxix and leukocytosis","type":"exact"},{"name":"neutrophil immunodeficiency syndrome","type":"exact"}],"termid":"MONDO:0011988","xrefs":{"Monarch":{"xref_id":"0011988"}}}


id: GO:0035557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is passed on from a receptor at the cell surface to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.","definition_xrefs":["GOC:signaling","ISBN:3527303782"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular signal transduction involved in cell surface receptor linked signaling (obsolete GO:0035557)","synonyms":[{"name":"intracellular signal transduction involved in cell surface receptor linked signaling","type":"exact"},{"name":"intracellular signal transduction involved in cell surface receptor linked signalling","type":"exact"},{"name":"intracellular signaling cascade involved in cell surface receptor linked signaling","type":"exact"},{"name":"intracellular signaling chain involved in cell surface receptor signaling","type":"exact"}],"termid":"GO:0035557"}


id: SO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a feature that is invalidated due to partial processing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"invalidated","termid":"SO:0000790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invalidated_by_partial_processing","synonyms":[{"name":"invalidated by partial processing","type":"exact"}],"termid":"SO:0000416"}


id: GO:0010804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or extent of the tumor necrosis factor-mediated signaling pathway. The tumor necrosis factor-mediated signaling pathway is the series of molecular signals generated as a consequence of tumor necrosis factor binding to a cell surface receptor.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor-mediated signaling pathway","termid":"GO:0010803"},{"relation_name":"negatively_regulates","term_name":"tumor necrosis factor-mediated signaling pathway","termid":"GO:0033209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of tumor necrosis factor-mediated signaling pathway","synonyms":[{"name":"negative regulation of TNF signaling","type":"exact"},{"name":"negative regulation of TNF-mediated signaling pathway","type":"exact"},{"name":"negative regulation of tumor necrosis factor-mediated signalling pathway","type":"exact"}],"termid":"GO:0010804"}


id: GO:0070786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process in which cells remain attached after division and form thread-like filaments that may penetrate into a solid growth medium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900430"},{"relation_name":"positively_regulates","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070786"}


id: PBO:0086075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function with 8 putative transmembrane segments; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression","termid":"PBO:0086075"}


id: PBO:0041941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 9","termid":"PBO:0041941"}


id: PBO:0064312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase 1","termid":"PBO:0064312"}


id: MONDO:0004241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrosis of the growth plate near the tibial tuberosity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone inflammation disease","termid":"MONDO:0002614"},{"relation_name":"is_a","term_name":"osteochondrosis","termid":"MONDO:0018381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Osgood-Schlatter disease","secondary_identifiers":["Orphanet:97335","NCIT:C34874","SCTID:430506003","SCTID:72047008","GARD:19364","SCTID:79353000","MEDGEN:10489","UMLS:C0029376","MedDRA:10031130","ICD9:736.89","DOID:7489"],"synonyms":[{"name":"Osgood-Schlatter disease","type":"exact"},{"name":"Osgood-Schlatter's disease","type":"exact"},{"name":"Osteochondrosis of proximal tibia","type":"exact"},{"name":"Osteochondrosis of the tibial tubercle","type":"exact"},{"name":"aseptic necrosis of the tibial tubercle","type":"exact"},{"name":"juvenile osteochondrosis of tibial tubercle","type":"exact"},{"name":"osteochondritis of the tibial tubercle","type":"exact"},{"name":"osteochondritis of tibial tubercle","type":"exact"}],"termid":"MONDO:0004241","xrefs":{"Monarch":{"xref_id":"0004241"}}}


id: MONDO:0012382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hyperinsulinemic hypoglycemia in which the cause of the disease is a mutation in the HADH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"3-hydroxyacyl-CoA dehydrogenase deficiency","termid":"MONDO:0017715"},{"relation_name":"is_a","term_name":"diazoxide-sensitive diffuse hyperinsulinism","termid":"MONDO:0015624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"hyperinsulinemic hypoglycemia, familial, 4","secondary_identifiers":["Orphanet:71212","MESH:C535310","MESH:C566493","SCTID:721236002","DOID:0070215","OMIM:609975","GARD:9870","MEDGEN:400646","UMLS:C1864948"],"synonyms":[{"name":"3-Alpha-hydroxyacyl-Coenzyme A dehydrogenase deficiency","type":"related"},{"name":"3-alpha hydroxyacyl-CoA dehydrogenase deficiency","type":"related"},{"name":"3-hydroxyacyl-CoA dehydrogenase deficiency","type":"related"},{"name":"3-hydroxyacyl-Coenzyme A dehydrogenase deficiency","type":"related"},{"name":"3-hydroxylacyl-CoA dehydrogenase deficiency","type":"related"},{"name":"HADH deficiency","type":"related"},{"name":"HADH hyperinsulinemic hypoglycemia (disease)","type":"exact"},{"name":"HADHSC deficiency","type":"related"},{"name":"HHF4","type":"related"},{"name":"L-3-Alpha-hydroxyacyl-CoA dehydrogenase, short chain, deficiency","type":"related"},{"name":"M-SCHAD deficiency","type":"related"},{"name":"M/SCHAD","type":"related"},{"name":"SCHAD deficiency","type":"related"},{"name":"SCHAD deficiency, formerly","type":"related"},{"name":"had deficiency","type":"related"},{"name":"hyperinsulinemic hypoglycemia (disease) caused by mutation in HADH","type":"exact"},{"name":"hyperinsulinemic hypoglycemia due to HADH deficiency","type":"exact"},{"name":"hyperinsulinemic hypoglycemia due to short chain 3-hydroxylacyl-CoA dehydrogenase deficiency","type":"exact"},{"name":"hyperinsulinemic hypoglycemia, familial, 4","type":"exact"},{"name":"hyperinsulinemic hypoglycemia, familial, type 4","type":"exact"},{"name":"hyperinsulinism due to SCHAD deficiency","type":"exact"},{"name":"hyperinsulinism due to glutamodehydrogenase deficiency","type":"exact"},{"name":"hyperinsulinism due to short chain 3-hydroxyacyl-coenzyme a dehydrogenase deficiency","type":"exact"},{"name":"hyperinsulinism due to short chain 3-hydroxylacyl-CoA dehydrogenase deficiency","type":"exact"},{"name":"medium and short chain 3-hydroxyacyl-CoA dehydrogenase deficiency","type":"related"}],"termid":"MONDO:0012382","xrefs":{"Monarch":{"xref_id":"0012382"}}}


id: MONDO:0018350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete malignant tumor of penis (obsolete MONDO:0018350)","termid":"MONDO:0018350","xrefs":{"Monarch":{"xref_id":"0018350"}}}


id: PBO:0076613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 31","termid":"PBO:0076613"}


id: SO:0000393
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U4 small nuclear RNA (U4 snRNA) is a component of the major U2-dependent spliceosome. It forms a duplex with U6, and with each splicing round, it is displaced from U6 (and the spliceosome) in an ATP-dependent manner, allowing U6 to refold and create the active site for splicing catalysis. A recycling process involving protein Prp24 re-anneals U4 and U6.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U4_snRNA"],"synonyms":[{"name":"U4 small nuclear RNA","type":"exact"},{"name":"U4 snRNA","type":"exact"},{"name":"small nuclear RNA U4","type":"exact"},{"name":"snRNA U4","type":"exact"}],"termid":"SO:0000393"}


id: PBO:0040105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acylsphingosine amidohydrolase 1","termid":"PBO:0040105"}


id: PBO:0063324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCMTD1 divergent transcript","termid":"PBO:0063324"}


id: PBO:0078663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 16-1","termid":"PBO:0078663"}


id: PBO:0065233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 1","termid":"PBO:0065233"}


id: PBO:0042735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein M","termid":"PBO:0042735"}


id: PBO:0046194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELN antisense RNA 1","termid":"PBO:0046194"}


id: PBO:0040064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP regulated phosphoprotein 19","termid":"PBO:0040064"}


id: PBO:0004663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ChAPs family protein (predicted)","termid":"PBO:0004663"}


id: PBO:0031157
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_cell_cycle_phase","termid":"PBO:0031157"}


id: PBO:0045308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 3A pseudogene 1","termid":"PBO:0045308"}


id: SO:0002076
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that intersects the 3' UTR of an incompletely annotated transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete_transcript_variant","termid":"SO:0002075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete_transcript_3UTR_variant","secondary_identifiers":["http://annovar.openbioinformatics.org/en/latest/user-guide/gene/"],"synonyms":[{"name":"ANNOVAR:ncRNA_UTR3","type":"exact"},{"name":"incomplete transcript 3UTR variant","type":"related"}],"termid":"SO:0002076"}


id: PBO:0043918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crooked neck pre-mRNA splicing factor 1","termid":"PBO:0043918"}


id: MOD:01671
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(L-isoaspartyl)-L-threonine, using free L-asparagine and releasing ammonia.","definition_xrefs":["PubMed:8706862","RESID:AA0525#THR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"O-(L-isoaspartyl)-L-threonine","termid":"MOD:01978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-isoaspartyl)-L-threonine (active site intermediate)","synonyms":[{"name":"(2S)-2-amino-4-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)-4-oxobutanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-3-([(4S)-3-amino-3-carboxypropanoyl]oxy)propanoic acid","type":"exact"},{"name":"ACT_SITE O-isoaspartyl threonine intermediate","type":"exact"},{"name":"O(beta)-(beta-aspartyl)threonine","type":"exact"},{"name":"O-(L-isoaspartyl)-L-threonine","type":"exact"},{"name":"O3-(isoaspartyl)-threonine","type":"exact"}],"termid":"MOD:01671"}


id: PBO:0049223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRK5 intronic transcript 1","termid":"PBO:0049223"}


id: PBO:0116279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major mitochondrial nuclease; has RNAse and DNA endo- and exonucleolytic activities; prevents genome instability by degrading extranuclear DNA sequences; roles in mitochondrial recombination, apoptosis and maintenance of polyploidy;  involved in fragmentation of genomic DNA during PND (programmed nuclear destruction); role in preventing L-A mycovirus pathogenesis; encodes ortholog of mammalian endoG","termid":"PBO:0116279"}


id: PBO:0048741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 3","termid":"PBO:0048741"}


id: FYPO:0003326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle. Normally, microtubules are nucleated from interphase microtubule organizing centers (iMTOCs) and from the cytoplasmic face of the spindle pole body (SPB).","definition_xrefs":["PomBase:mah","PMID:19001497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal interphase microtubule nucleation","synonyms":[{"name":"normal interphase cytoplasmic microtubule nucleation","type":"exact"},{"name":"normal microtubule nucleation during interphase during vegetative growth","type":"exact"},{"name":"normal microtubule nucleation during interphase of mitotic cell cycle","type":"related"},{"name":"normal microtubule nucleation during mitotic interphase","type":"exact"}],"termid":"FYPO:0003326"}


id: GO:0021683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the cerebellar granular layer is generated and organized. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.","definition_xrefs":["GOC:cls","ISBN:0838580343","GO_REF:0000021","GOC:jid","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"cerebellar granular layer development","termid":"GO:0021681"},{"relation_name":"part_of","term_name":"cerebellar cortex morphogenesis","termid":"GO:0021696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granular layer morphogenesis","termid":"GO:0021683"}


id: MONDO:0005308
data:
  {"annotated_genes":["SJAG_00773","SJAG_01370","SJAG_03794"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014552"},{"annotations":[87534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014909"},{"annotations":[87151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"}]},"cv_name":"mondo","definition":"A genetic disorder of the cellular cilia or the cilia anchoring structures, the basal bodies, or of ciliary function.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_01370":null,"SJAG_03794":null},"genotype_count":0,"is_obsolete":false,"name":"ciliopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GTR:AN0966173","Orphanet:363250","MEDGEN:908923","UMLS:C4277690","DOID:0060340","EFO:0003900","GARD:21544"],"synonyms":[{"name":"ciliopathies","type":"related"},{"name":"ciliopathy","type":"exact"}],"termid":"MONDO:0005308","terms_by_termid":{"MONDO:0014552":null,"MONDO:0014909":null,"MONDO:0054565":null},"xrefs":{"Monarch":{"xref_id":"0005308"}}}


id: FYPO:0006538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid during a cellular response to a pheromone. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"spheroid cell during cellular response to pheromone","synonyms":[{"name":"cell morphology, round cells during cellular response to pheromone","type":"related"},{"name":"cell morphology, rounded cells during cellular response to pheromone","type":"related"},{"name":"rounded cell during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0006538"}


id: PBO:0005547
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.48","termid":"PBO:0005547"}


id: MOD:00438
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a myristoyl group.","definition_xrefs":["Unimod:45","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"myristoylated residue","synonyms":[{"name":"C14:0 aliphatic acylated residue","type":"exact"},{"name":"MyrRes","type":"exact"},{"name":"Myristoyl","type":"related"},{"name":"Myristoylation","type":"exact"}],"termid":"MOD:00438"}


id: PBO:0046348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 6","termid":"PBO:0046348"}


id: PBO:0066878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 178","termid":"PBO:0066878"}


id: PBO:0116775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSHZ2 antisense RNA 1","termid":"PBO:0116775"}


id: PBO:0044099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A7","termid":"PBO:0044099"}


id: GO:1900049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone exchange.","definition_xrefs":["PMID:20332092","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone exchange (obsolete GO:1900049)","synonyms":[{"name":"regulation of histone chaperone","type":"related"},{"name":"regulation of histone displacement","type":"exact"},{"name":"regulation of histone replacement","type":"exact"}],"termid":"GO:1900049"}


id: MONDO:0011500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Becker nevus syndrome is characterized by the presence of a Becker nevus in association with underdevelopment (hypoplasia) of the breast or other skin-related, muscular, or skeletal defects, all of which usually involve the same side of the bodyas the nevus (ipsilateral). Specific signs and symptoms in addition to the nevus may include ipsilateral breast hypoplasia; skeletal abnormalities such ashypoplasia of the shoulder girdle, scoliosis, fused ribs, and ipsilateral shortness of the arm; and several other features. Thecondition is thought to be sporadic (occurring in individuals with no history of the condition in the family). Treatment varies depending upon the specific symptoms present and the extent of the condition in the affected individual.","direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Becker nevus syndrome","secondary_identifiers":["MESH:C565735","Orphanet:64755","GARD:5901","MEDGEN:347608","OMIM:604919","UMLS:C1858042"],"synonyms":[{"name":"Becker nevus syndrome","type":"exact"},{"name":"hairy epidermal nevus syndrome","type":"related"},{"name":"pigmentary hairy epidermal nevus","type":"exact"}],"termid":"MONDO:0011500","xrefs":{"Monarch":{"xref_id":"0011500"}}}


id: PBO:0045429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-19 like C-mannosyltransferase 1","termid":"PBO:0045429"}


id: PBO:0034590
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_meiosis_II","termid":"PBO:0034590"}


id: FYPO:0004673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, contains more than one septum, and contains a nucleus that is broken into small fragments.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"fragmented nucleus","termid":"FYPO:0006661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0002403","FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000032","FYPO:0005447","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable elongated multiseptate vegetative cell with fragmented nucleus","synonyms":[{"name":"elongated inviable multiseptate cell with fragmented nucleus","type":"exact"},{"name":"inviable elongated multiseptate cell with fragmented nucleus during vegetative growth","type":"exact"},{"name":"inviable elongated multiseptate vegetative cell with fragmented DNA","type":"related"},{"name":"inviable elongated multiseptate vegetative cell with fragmented nucleus during mitotic cell cycle","type":"related"},{"name":"lethal; elongated multiseptate vegetative cell with fragmented nucleus","type":"exact"}],"termid":"FYPO:0004673"}


id: FYECO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which the proteasome inhibitor MG132 was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MG132","synonyms":[{"name":"proteasome inhibitor","type":"broad"}],"termid":"FYECO:0000327"}


id: PBO:0074111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 3","termid":"PBO:0074111"}


id: PBO:0017058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sSchizosaccharomyces pombe specific protein, similar to a region of alpha-galactosidase","termid":"PBO:0017058"}


id: MONDO:0017662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete miscellaneous movement disorder due to genetic neurodegenerative disease (obsolete MONDO:0017662)","secondary_identifiers":["Orphanet:307058"],"termid":"MONDO:0017662","xrefs":{"Monarch":{"xref_id":"0017662"}}}


id: PBO:0066181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM5 antisense RNA 1","termid":"PBO:0066181"}


id: MONDO:0043358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A toxicity of hematopoietic stem cell transplantation that manifests as fever, rash and pulmonary deterioration which becomes evident at marrow engraftment. It occurs unexpectedly and is occasionally fatal. It can occur after an autogeneic or an allogeneic hematopoietic cell transplantation.","definition_xrefs":["NCIT:C63324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disease related to hematopoietic stem cell transplant","termid":"MONDO:0700222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engraftment syndrome","secondary_identifiers":["MEDGEN:214709","UMLS:C0919746","SCTID:426768001","GARD:11909"],"synonyms":[{"name":"engraftment syndrome","type":"exact"}],"termid":"MONDO:0043358","xrefs":{"Monarch":{"xref_id":"0043358"}}}


id: MONDO:0006037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrolethalus (HLS) is a severe fetal malformation syndrome characterized by craniofacial dysmorphic features, central nervous system, cardiac, respiratory tract and limb abnormalities.","definition_xrefs":["Orphanet:2189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"hydrolethalus syndrome","secondary_identifiers":["SCTID:721232000","MESH:C536079","OMIMPS:236680","DOID:0050779","UMLS:C2931104","MEDGEN:419335","GARD:6683"],"synonyms":[{"name":"HLS","type":"related"},{"name":"Salonen-Herva-Norio syndrome","type":"exact"},{"name":"hydrolethalus","type":"related"}],"termid":"MONDO:0006037","xrefs":{"Monarch":{"xref_id":"0006037"}}}


id: GO:0001758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: retinal + NAD+ + H2O = retinoate + NADH. Acts on both 11-trans and 13-cis forms of retinal.","definition_xrefs":["EC:1.2.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"retinal dehydrogenase activity","secondary_identifiers":["RHEA:16177","Reactome:R-HSA-5696101","MetaCyc:RETINAL-DEHYDROGENASE-RXN","Reactome:R-HSA-5362522"],"synonyms":[{"name":"cytosolic retinal dehydrogenase activity","type":"related"},{"name":"retinal:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0001758"}


id: MONDO:0010960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 3","secondary_identifiers":["OMIM:600931","UMLS:C1833117","MEDGEN:371487"],"synonyms":[{"name":"Pcdh3","type":"related"},{"name":"protocadherin 3","type":"exact"},{"name":"protocadherin type 3","type":"exact"}],"termid":"MONDO:0010960","xrefs":{"Monarch":{"xref_id":"0010960"}}}


id: FYPO:0008269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of phosphate (Pi) measured in the cell is lower than normal.","definition_xrefs":["PMID:37949217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphate (Pi) level","termid":"FYPO:0008268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased total cellular phosphate (Pi) level","termid":"FYPO:0008269"}


id: MONDO:0017427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital deformities of limbs","secondary_identifiers":["MEDGEN:60222","Orphanet:294944","UMLS:C0206762","MedDRA:10024500","GARD:21181"],"termid":"MONDO:0017427","xrefs":{"Monarch":{"xref_id":"0017427"}}}


id: MONDO:1011363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ulcer disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ulcer disease, non-human animal","termid":"MONDO:1011363","xrefs":{"Monarch":{"xref_id":"1011363"}}}


id: MONDO:0006627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete microscopic polyangiitis (obsolete MONDO:0006627)","termid":"MONDO:0006627","xrefs":{"Monarch":{"xref_id":"0006627"}}}


id: GO:0099169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane of a symmetric synapse consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic specialization membrane of symmetric synapse (obsolete GO:0099169)","termid":"GO:0099169"}


id: PBO:0079514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidine phosphorylase","termid":"PBO:0079514"}


id: MONDO:0004164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of prostate carcinoma characterized by the presence of malignant cells forming syncytial patterns and dense lymphocytic infiltrates.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostatic acinar adenocarcinoma","termid":"MONDO:0002493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lymphoepithelioma-like acinar prostate adenocarcinoma","secondary_identifiers":["DOID:7246","MEDGEN:1834954","NCIT:C39885","UMLS:C5787176"],"synonyms":[{"name":"acinar prostate adenocarcinoma, lymphoepithelioma-like variant","type":"exact"},{"name":"lymphoepithelioma-like variant acinar prostate adenocarcinoma","type":"exact"}],"termid":"MONDO:0004164","xrefs":{"Monarch":{"xref_id":"0004164"}}}


id: GO:0035746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of granzyme A due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"granzyme A production","termid":"GO:0035746"}


id: PBO:0086553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YGL118C is not an essential gene","termid":"PBO:0086553"}


id: SO:1000025
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from adenine to thymine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_to_pyrimidine_transversion","termid":"SO:1000023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_to_T_transversion","synonyms":[{"name":"A to T transversion","type":"exact"}],"termid":"SO:1000025"}


id: PBO:0001342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin capping protein beta subunit (predicted)","termid":"PBO:0001342"}


id: PBO:0075930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 22","termid":"PBO:0075930"}


id: GO:1990080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the biogenic amine 2-phenylethylamine to initiate a change in cell activity.","definition_xrefs":["PMID:16878137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"2-phenylethylamine receptor activity","synonyms":[{"name":"beta-phenylethylamine receptor activity","type":"exact"}],"termid":"GO:1990080"}


id: PR:Q9UT27
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pvg1 gene.","definition_xrefs":["UniProtKB:Q9UT27","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvyl transferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8F11.10c","synonyms":[{"name":"PvGal synthesis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pvg1","type":"exact"},{"name":"pyruvylated Gal-beta-1,3-epitope synthesis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT27"}


id: PBO:0025452
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial complex III deficiency","termid":"PBO:0025452"}


id: GO:0005105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 fibroblast growth factor receptor (FGFR1).","definition_xrefs":["GOC:ceb","GOC:fb_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor binding","termid":"GO:0005104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 1 fibroblast growth factor receptor binding","synonyms":[{"name":"FGFR1 binding","type":"broad"},{"name":"FGFR1 ligand","type":"narrow"},{"name":"breathless binding","type":"narrow"},{"name":"breathless ligand","type":"narrow"},{"name":"type 1 fibroblast growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005105"}


id: MONDO:0026777
data:
  {"annotated_genes":["SJAG_00853"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86230],"is_not":false,"summary":null,"term":"MONDO:0026777"}]},"cv_name":"mondo","definition":"An adult-onset inflammatory disease that affects only males and is caused by somatic, not germline, mutations. The disorder is characterized by adult onset of rheumatologic symptoms at a mean age of 64 years. Features include recurrent fevers, pulmonary and dermatologic inflammatory manifestations, vasculitis, deep vein thrombosis, arthralgias, and ear and nose chondritis. Laboratory studies indicate hematologic abnormalities, including macrocytic anemia, as well as increased levels of acute-phase reactants; about half of patients have positive autoantibodies. Bone marrow biopsy shows degenerative vacuolization restricted to myeloid and erythroid precursor cells, as well as variable hematopoietic dyspoiesis and dysplasias. The condition does not respond to rheumatologic medications and the features may result in premature death.","definition_xrefs":["OMIM:301054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00853":null},"genotype_count":0,"is_obsolete":false,"name":"VEXAS syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C181924","Orphanet:596753","GARD:15001","UMLS:C5435753","MEDGEN:1765785","DOID:0080828"],"synonyms":[{"name":"VEXAS","type":"exact"},{"name":"VEXAS syndrome, somatic","type":"exact"},{"name":"vacuoles, E1 enzyme, X-linked, autoinflammatory, somatic syndrome","type":"exact"}],"termid":"MONDO:0026777","terms_by_termid":{"MONDO:0026777":null},"xrefs":{"Monarch":{"xref_id":"0026777"}}}


id: PBO:0086145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for normal mitochondrial morphology; has similarity to hemolysins","termid":"PBO:0086145"}


id: SO:0000444
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding exon in the 3' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noncoding_exon","termid":"SO:0000198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_noncoding_exon","synonyms":[{"name":"three prime noncoding exon","type":"exact"}],"termid":"SO:0000444"}


id: GO:0019849
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Acts as to cause injury to other living cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytotoxin activity (obsolete GO:0019849)","synonyms":[{"name":"cytotoxin activity","type":"exact"}],"termid":"GO:0019849"}


id: GO:1901840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of RNA polymerase I regulatory region sequence-specific DNA binding.","definition_xrefs":["GOC:sart","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of RNA polymerase I regulatory region sequence-specific DNA binding (obsolete GO:1901840)","synonyms":[{"name":"down regulation of RNA polymerase I regulatory region sequence-specific DNA binding","type":"exact"},{"name":"down-regulation of RNA polymerase I regulatory region sequence-specific DNA binding","type":"exact"},{"name":"downregulation of RNA polymerase I regulatory region sequence-specific DNA binding","type":"exact"},{"name":"inhibition of RNA polymerase I regulatory region sequence-specific DNA binding","type":"narrow"}],"termid":"GO:1901840"}


id: PBO:0084626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methylene-fatty-acyl-phospholipid synthase; catalyzes the last two steps in phosphatidylcholine biosynthesis; also known as phospholipid methyltransferase","termid":"PBO:0084626"}


id: GO:0003009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and in most cases it is under voluntary control.","definition_xrefs":["GOC:mtg_cardio","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle contraction","termid":"GO:0006941"},{"relation_name":"part_of","term_name":"musculoskeletal movement","termid":"GO:0050881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle contraction","termid":"GO:0003009"}


id: PBO:0087352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spliceosome-associated protein that is required for pre-mRNA splicing; necessary for Prp2p function at the first catalytic step of splicing; has similarity to S. pombe Cwf22p; CWC22 is an essential protein","termid":"PBO:0087352"}


id: MONDO:0003481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor arising from the ovary. Morphologically, it is identical to seminoma and consists of a monotonous population of germ cells with abundant pale cytoplasm and uniform nuclei. The stroma invariably contains chronic inflammatory cells, mostly T-lymphocytes. It responds to chemotherapy or radiotherapy and the prognosis relates to the tumor stage.","definition_xrefs":["NCIT:C8106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysgerminoma","termid":"MONDO:0003002"},{"relation_name":"is_a","term_name":"ovarian primitive germ cell tumor","termid":"MONDO:0003408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"dysgerminoma of ovary","secondary_identifiers":["DOID:5511","SCTID:254874008","EFO:1000414","ONCOTREE:ODYS","UMLS:C0346185","MEDGEN:83414","icd11.foundation:208782658"],"synonyms":[{"name":"dysgerminoma","type":"related"},{"name":"dysgerminoma of ovary","type":"exact"},{"name":"dysgerminoma of the ovary","type":"exact"},{"name":"germ cell dysgerminoma of ovary","type":"exact"},{"name":"germ cell dysgerminoma of the ovary","type":"exact"},{"name":"ovarian dysgerminoma","type":"exact"},{"name":"ovarian germ cell dysgerminoma","type":"exact"},{"name":"ovary dysgerminoma (disease)","type":"exact"}],"termid":"MONDO:0003481","xrefs":{"Monarch":{"xref_id":"0003481"}}}


id: PBO:0005382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp2 (predicted)","termid":"PBO:0005382"}


id: MONDO:0010749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by short stature, trigonocephaly and developmental delay. It has been described in three males. Moderate intellectual deficit was reported in one of the males and the other two patients displayed psychomotor retardation. X-linked transmission has been suggested but autosomal recessive inheritance can not be ruled out.","definition_xrefs":["Orphanet:3369"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigonocephaly-short stature-developmental delay syndrome","secondary_identifiers":["GARD:243","MESH:C536620","MEDGEN:374138","SCTID:733066002","OMIM:314320","UMLS:C1839125"],"synonyms":[{"name":"Say Meyer syndrome","type":"related"},{"name":"Say-Meyer syndrome","type":"exact"},{"name":"trigonocephaly with short stature and developmental delay","type":"related"},{"name":"trigonocephaly, short stature and developmental delay","type":"related"},{"name":"trigonocephaly, short stature, and retarded psychomotor development","type":"related"}],"termid":"MONDO:0010749","xrefs":{"Monarch":{"xref_id":"0010749"}}}


id: PBO:0001479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane anchored protein Mac1","termid":"PBO:0001479"}


id: PBO:0030671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_heterochromatin_during_vegetative_growth","termid":"PBO:0030671"}


id: PBO:0042250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor like 2","termid":"PBO:0042250"}


id: PBO:0004833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine synthetase","termid":"PBO:0004833"}


id: GO:0120011
data:
  {"annotated_genes":["SJAG_03247","SJAG_03718","SJAG_02323","SJAG_01329","SJAG_01590","SJAG_01722","SJAG_00355","SJAG_02375"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91810,94575,102953,106692,108571,109733,111706,116608],"is_not":false,"summary":null,"term":"GO:0120011"}]},"cv_name":"biological_process","definition":"The transport of sterols between membranes in which a sterol molecule is transported through an aqueous phase from the outer leaflet of a donor membrane to the outer leaflet of an acceptor membrane. This process does not require metabolic energy and can be either spontaneous or mediated by lipid transfer proteins (LTPs).","definition_xrefs":["PMID:20823909","PMID:25797198","PMID:24220498","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol transport","termid":"GO:0015918"},{"relation_name":"is_a","term_name":"intermembrane lipid transfer","termid":"GO:0120009"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00355":null,"SJAG_01329":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_03247":null,"SJAG_03718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"intermembrane sterol transfer","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120011","terms_by_termid":{"GO:0120011":null}}


id: MONDO:0000592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A developmental disorder of mental health that categorizes specific learning disabilities and developmental disorders affecting coordination.","definition_xrefs":["DOID:0060038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental disorder of mental health","termid":"MONDO:0005503"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific developmental disorder","secondary_identifiers":["SCTID:10720004","MEDGEN:508157","ICD9:315.8","UMLS:C0037785"],"synonyms":[{"name":"specific delays in development","type":"related"},{"name":"specific developmental disorder","type":"exact"}],"termid":"MONDO:0000592","xrefs":{"Monarch":{"xref_id":"0000592"}}}


id: GO:0003191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the coronary sinus valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"coronary sinus valve morphogenesis","termid":"GO:0003182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary sinus valve formation","termid":"GO:0003191"}


id: MONDO:0012162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any patterned macular dystrophy in which the cause of the disease is a mutation in the CTNNA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patterned macular dystrophy","termid":"MONDO:0020381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"patterned macular dystrophy 2","secondary_identifiers":["MEDGEN:332348","GARD:18238","UMLS:C1837029","DOID:0060864","OMIM:608970"],"synonyms":[{"name":"CTNNA1 patterned macular dystrophy","type":"exact"},{"name":"MDPT2","type":"exact"},{"name":"butterfly-shaped pigmentary maculary dystrophy 2","type":"exact"},{"name":"macular dystrophy, butterfly-Shaped pigmentary, 2","type":"related"},{"name":"macular dystrophy, patterned, 2","type":"related"},{"name":"macular dystrophy, patterned, type 2","type":"exact"},{"name":"patterned macular dystrophy caused by mutation in CTNNA1","type":"exact"},{"name":"patterned macular dystrophy type 2","type":"exact"}],"termid":"MONDO:0012162","xrefs":{"Monarch":{"xref_id":"0012162"}}}


id: PBO:0055632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3071","termid":"PBO:0055632"}


id: PBO:0078179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-3","termid":"PBO:0078179"}


id: MONDO:0016128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"},{"relation_name":"is_a","term_name":"infectious myositis","termid":"MONDO:0023483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"parasitic myositis","secondary_identifiers":["Orphanet:206997","SCTID:60970005","UMLS:C0263997","GARD:20379","icd11.foundation:110646208","MEDGEN:538249","ICD9:728.2"],"termid":"MONDO:0016128","xrefs":{"Monarch":{"xref_id":"0016128"}}}


id: GO:0044636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the regulation of complement activation via the classical pathway of the bitten/stung organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of complement activation, classical pathway in another organism (obsolete GO:0044636)","synonyms":[{"name":"envenomation resulting in modulation of complement activation, classical pathway in other organism","type":"exact"}],"termid":"GO:0044636"}


id: SO:0001993
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Intronic positions associated with cis-splicing. Contains the first and second positions immediately before the exon and the first, second and fifth positions immediately after.","definition_xrefs":["SANGER:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_splice_site","termid":"SO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended_cis_splice_site","synonyms":[{"name":"extended cis splice site","type":"exact"}],"termid":"SO:0001993"}


id: GO:0003887
data:
  {"annotated_genes":["SJAG_05239","SJAG_02908","SJAG_02658","SJAG_02818","SJAG_00153","SJAG_03906","SJAG_04791","SJAG_05197","SJAG_00611","SJAG_00814","SJAG_16460","SJAG_04089"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58239,70817,73627,74535,75208,75355,75379,77241,78046,78315,103172,103223],"is_not":false,"summary":null,"term":"GO:0003887"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time.","definition_xrefs":["GOC:vw","EC:2.7.7.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA polymerase activity","termid":"GO:0034061"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_00814":null,"SJAG_02658":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04791":null,"SJAG_05197":null,"SJAG_05239":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"DNA-directed DNA polymerase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-174427","Reactome:R-HSA-110319","Reactome:R-HSA-68950","GO:0003888","Reactome:R-HSA-164513","GO:0003895","GO:0003893","GO:0016000","Reactome:R-HSA-111253","Reactome:R-HSA-174444","Reactome:R-HSA-5691001","Reactome:R-HSA-5693593","Reactome:R-HSA-9710480","GO:0016448","Reactome:R-HSA-5358579","GO:0003891","GO:0003890","Reactome:R-HSA-5687640","Reactome:R-HSA-110368","GO:0016450","Reactome:R-HSA-5656148","Reactome:R-HSA-5653840","GO:0008723","Reactome:R-HSA-110317","Reactome:R-HSA-5656158","MetaCyc:DNA-DIRECTED-DNA-POLYMERASE-RXN","GO:0019984","Reactome:R-HSA-5649723","Reactome:R-HSA-5655892","Reactome:R-HSA-5649883","Reactome:R-HSA-5687360","Reactome:R-HSA-6782208","GO:0016449","GO:0003894","Reactome:R-HSA-164505","Reactome:R-HSA-73932","Reactome:R-HSA-6786166","GO:0003889","Reactome:R-HSA-69116","Reactome:R-HSA-5655965","Reactome:R-HSA-110311","GO:0016451","GO:0016452","GO:0015999"],"synonyms":[{"name":"DNA duplicase activity","type":"related"},{"name":"DNA nucleotidyltransferase (DNA-directed) activity","type":"related"},{"name":"DNA polymerase I","type":"narrow"},{"name":"DNA polymerase II","type":"narrow"},{"name":"DNA polymerase III","type":"narrow"},{"name":"DNA polymerase V activity","type":"narrow"},{"name":"DNA polymerase alpha","type":"narrow"},{"name":"DNA polymerase beta","type":"narrow"},{"name":"DNA polymerase gamma","type":"narrow"},{"name":"DNA replicase activity","type":"related"},{"name":"DNA-dependent DNA polymerase activity","type":"related"},{"name":"Klenow fragment","type":"narrow"},{"name":"Taq DNA polymerase","type":"narrow"},{"name":"Taq Pol I","type":"narrow"},{"name":"Tca DNA polymerase","type":"narrow"},{"name":"alpha DNA polymerase activity","type":"narrow"},{"name":"beta DNA polymerase activity","type":"narrow"},{"name":"delta DNA polymerase activity","type":"narrow"},{"name":"deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"related"},{"name":"deoxyribonucleic acid duplicase activity","type":"related"},{"name":"deoxyribonucleic duplicase activity","type":"related"},{"name":"deoxyribonucleic polymerase I","type":"narrow"},{"name":"duplicase","type":"broad"},{"name":"epsilon DNA polymerase activity","type":"narrow"},{"name":"eta DNA polymerase activity","type":"narrow"},{"name":"gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"iota DNA polymerase activity","type":"narrow"},{"name":"kappa DNA polymerase activity","type":"narrow"},{"name":"lambda DNA polymerase activity","type":"narrow"},{"name":"mu DNA polymerase activity","type":"narrow"},{"name":"nu DNA polymerase activity","type":"narrow"},{"name":"sequenase","type":"related"},{"name":"sigma DNA polymerase activity","type":"narrow"},{"name":"theta DNA polymerase activity","type":"narrow"},{"name":"zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:0003887","terms_by_termid":{"GO:0003887":null}}


id: MONDO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A speech disorder characterized by frequent sound or syllable repetitions, sound prolongations, or other dysfluencies that are inappropriate for the individual's age.","definition_xrefs":["NCIT:C35043"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"articulation disorder","termid":"MONDO:0002903"},{"relation_name":"is_a","term_name":"speech disorder","termid":"MONDO:0004730"},{"relation_name":"is_a","term_name":"language disorder","termid":"MONDO:0004750"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stutter disorder","secondary_identifiers":["OMIMPS:184450","UMLS:C0038131","DOID:0060243","MEDGEN:20932"],"synonyms":[{"name":"familial persistent stuttering","type":"narrow"},{"name":"stammering","type":"exact"},{"name":"stutter","type":"exact"},{"name":"stuttering","type":"exact"},{"name":"stuttering, familial persistent","type":"narrow"}],"termid":"MONDO:0000723","xrefs":{"Monarch":{"xref_id":"0000723"}}}


id: GO:0099128
data:
  {"annotated_genes":["SJAG_00894","SJAG_01238","SJAG_04397","SJAG_00532","SJAG_00186","SJAG_01063","SJAG_03862"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93288,93516,98587,103447,107242,110048,114255],"is_not":false,"summary":null,"term":"GO:0099128"}]},"cv_name":"cellular_component","definition":"A protein complex capable of forming 2Fe-2S clusters in mitochondria. In humans it consists of ISCU, NFS1, LYRM4, NDUFAB1 and FXN.","definition_xrefs":["PMID:34660592","PMID:31101807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"is_a","term_name":"L-cysteine desulfurase complex","termid":"GO:1990221"},{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly complex","termid":"GO:1990229"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_03862":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0032991","GO:0005829","GO:0005737","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"mitochondrial [2Fe-2S] assembly complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial ISCU complex","type":"exact"},{"name":"mitochondrial iron-sulfur cluster assembly complex","type":"related"}],"termid":"GO:0099128","terms_by_termid":{"GO:0099128":null}}


id: PBO:0112994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adenylate kinase, required for purine metabolism; controls ATP homeostasis; localized to the cytoplasm and the mitochondria; lacks cleavable signal sequence; protein abundance increases in response to DNA replication stress; mutations affecting Adk1p catalytic activity deregulate expression of phosphate utilization genes PHO5 and PHO84; human homolog AK1 can complement yeast adk1 mutant","termid":"PBO:0112994"}


id: PR:Q10199
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An F-BAR domain only protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation protein imp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.02","secondary_identifiers":["UniProtKB:Q10199"],"synonyms":[{"name":"SPBC11C11.02","type":"related"},{"name":"Spom972h-FCHO2","type":"exact"}],"termid":"PR:Q10199"}


id: PBO:0075569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaffold protein involved in DNA repair","termid":"PBO:0075569"}


id: GO:0048651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individuals that have the potential to develop any of several possible distinct developmental paths have their individual developmental fates determined in response to environmental cues.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"polyphenic determination","termid":"GO:0048647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyphenic determination, influence by environmental factors","termid":"GO:0048651"}


id: MONDO:0003194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma that involves the lung.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung benign neoplasm","termid":"MONDO:0002732"},{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangioma of lung","secondary_identifiers":["DOID:490","MEDGEN:1843480","UMLS:C0241983"],"synonyms":[{"name":"lung hemangioma","type":"exact"},{"name":"pulmonary hemangioma","type":"exact"}],"termid":"MONDO:0003194","xrefs":{"Monarch":{"xref_id":"0003194"}}}


id: PBO:0047385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 22","termid":"PBO:0047385"}


id: GO:0043200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amino acid stimulus. An amino acid is a carboxylic acids containing one or more amino groups.","definition_xrefs":["GOC:ef","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to amino acid","secondary_identifiers":["GO:0010237"],"synonyms":[{"name":"response to amino acid stimulus","type":"exact"}],"termid":"GO:0043200"}


id: PBO:0065200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF19 pseudogene 1","termid":"PBO:0065200"}


id: PBO:0090020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifunctional pseudouridylate synthase/pseudouridine kinase","termid":"PBO:0090020"}


id: MONDO:0003017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant form of peritoneal solitary fibrous tumor.","definition_xrefs":["MONDO:patterns/malignant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneum cancer","termid":"MONDO:0002087"},{"relation_name":"is_a","term_name":"peritoneal solitary fibrous tumor","termid":"MONDO:0037737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant peritoneal solitary fibrous tumor","secondary_identifiers":["DOID:4490"],"synonyms":[{"name":"peritoneal solitary fibrous tumor, malignant","type":"exact"},{"name":"pleural and peritoneal solitary fibrous tumor","type":"exact"},{"name":"pleural and peritoneal solitary fibrous tumour","type":"exact"}],"termid":"MONDO:0003017","xrefs":{"Monarch":{"xref_id":"0003017"}}}


id: PBO:0080906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 6","termid":"PBO:0080906"}


id: GO:0051040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"regulates","term_name":"calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules","termid":"GO:0016338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium-independent cell-cell adhesion","termid":"GO:0051040"}


id: PBO:0070434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPGR interacting protein 1","termid":"PBO:0070434"}


id: PBO:0044443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 12","termid":"PBO:0044443"}


id: GO:0035608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a glutamate residue from a protein. Glutamate residues in proteins can be gene-encoded, or added as side chains during the protein modification process of polyglutamylation.","definition_xrefs":["PMID:21074048","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamic acid modification","termid":"GO:0018200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deglutamylation","synonyms":[{"name":"protein amino acid deglutamylation","type":"exact"}],"termid":"GO:0035608"}


id: PBO:0088258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER transmembrane protein, DUF423 family protein, human TMEM256 ortholog, implicated in lipid metabolism or membrane organization","termid":"PBO:0088258"}


id: MONDO:0009415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoglycemia, leucine-induced","secondary_identifiers":["DOID:0112262","OMIM:240800","MEDGEN:82888","SCTID:62151007","UMLS:C0271714","MESH:C537150"],"synonyms":[{"name":"LIH","type":"related"},{"name":"familial infantile hypoglycemia precipitated by leucine","type":"related"},{"name":"hypoglycemia leucine induced","type":"related"},{"name":"hypoglycemia leucine-induced","type":"related"},{"name":"hypoglycemia of infancy, leucine-sensitive","type":"exact"},{"name":"hypoglycemia, leucine-induced","type":"exact"},{"name":"leucine-sensitive hypoglycemia of infancy","type":"related"}],"termid":"MONDO:0009415","xrefs":{"Monarch":{"xref_id":"0009415"}}}


id: FYECO:0000089
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium oleate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Na oleate","synonyms":[{"name":"sodium oleate added","type":"exact"}],"termid":"FYECO:0000089"}


id: PBO:0089509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inheritance GTPase, tubulin-like","termid":"PBO:0089509"}


id: GO:0014830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the arteriole. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The arteriole is the smallest division of the artery located between the muscular arteries and the capillaries.","definition_xrefs":["MSH:D001160","GOC:mtg_muscle","MA:0000706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery smooth muscle contraction","termid":"GO:0014824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"arteriole smooth muscle contraction","termid":"GO:0014830"}


id: FYPO:0008062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding to the chromatin central core by a gene product (usually a protein) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PMID:15908586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased chromatin binding at centromere central core","termid":"FYPO:0008062"}


id: PBO:0047089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 138 member A","termid":"PBO:0047089"}


id: PBO:0039404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 5","termid":"PBO:0039404"}


id: GO:0008492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cAMP generating peptide activity (obsolete GO:0008492)","synonyms":[{"name":"cAMP generating peptide activity","type":"exact"},{"name":"cyclic AMP generating peptide activity","type":"exact"}],"termid":"GO:0008492"}


id: PBO:0045528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deltex E3 ubiquitin ligase 1","termid":"PBO:0045528"}


id: MONDO:1012984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parkinson disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease, non-human animal","termid":"MONDO:1012984","xrefs":{"Monarch":{"xref_id":"1012984"}}}


id: PBO:0055141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2560","termid":"PBO:0055141"}


id: PBO:0087003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein (RhoGAP); contains RhoGAP activity specific for both Rho1p and Cdc42p, and potentially Rho4p; acts with the RhoGAP Bem3p to negatively regulate Cdc42p-dependent signal transduction; involved in the control of cytoskeleton organization and cellular morphogenesis; required for bud emergence and for the morphogenesis checkpoint in response to actin depolymerization; localizes to sites of polarized growth and the plasma membrane","termid":"PBO:0087003"}


id: PBO:0046970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member G","termid":"PBO:0046970"}


id: PBO:0038732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin like 6A","termid":"PBO:0038732"}


id: FYPO:0004475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the initiation of nuclear DNA replication is decreased. Initiation may be affected at one or more origins.","definition_xrefs":["PMID:22970243","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication initiation","termid":"FYPO:0001344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitotic DNA replication initiation","synonyms":[{"name":"decreased DNA replication initiation during mitotic cell cycle","type":"exact"},{"name":"decreased DNA replication initiation during vegetative growth","type":"exact"},{"name":"reduced mitotic DNA replication initiation","type":"exact"}],"termid":"FYPO:0004475"}


id: GO:1990359
data:
  {"annotated_genes":["SJAG_01078","SJAG_01803"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94096,94097],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010312"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by a zinc ion stimulus.","definition_xrefs":["GOC:kmv","PMID:17888400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to zinc ion","termid":"GO:0010043"},{"relation_name":"is_a","term_name":"stress response to metal ion","termid":"GO:0097501"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stress response to zinc ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to zinc ion stress","type":"exact"},{"name":"response to zinc toxicity","type":"related"},{"name":"stress response to zinc","type":"broad"}],"termid":"GO:1990359","terms_by_termid":{"GO:0010312":null}}


id: GO:0033097
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Either of the lipid bilayers that surround an amyloplast and form the amyloplast envelope.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid membrane","termid":"GO:0042170"},{"relation_name":"part_of","term_name":"amyloplast envelope","termid":"GO:0033096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"amyloplast membrane","termid":"GO:0033097"}


id: GO:0009415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of water.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"},{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to water","synonyms":[{"name":"response to water stimulus","type":"exact"}],"termid":"GO:0009415"}


id: PBO:0017764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCHC type zinc finger protein (predicted)","termid":"PBO:0017764"}


id: GO:0032645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of granulocyte macrophage colony-stimulating factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"granulocyte macrophage colony-stimulating factor production","termid":"GO:0032604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of granulocyte macrophage colony-stimulating factor production","secondary_identifiers":["GO:0045423"],"synonyms":[{"name":"regulation of GM-CSF production","type":"exact"},{"name":"regulation of granulocyte macrophage colony stimulating factor production","type":"exact"},{"name":"regulation of granulocyte macrophage colony-stimulating factor biosynthetic process","type":"narrow"}],"termid":"GO:0032645"}


id: GO:1990090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nerve growth factor stimulus.","definition_xrefs":["Wikipedia:Nerve_growth_factor","PMID:22399805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"},{"relation_name":"is_a","term_name":"response to nerve growth factor","termid":"GO:1990089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nerve growth factor stimulus","synonyms":[{"name":"cellular response to NGF","type":"exact"}],"termid":"GO:1990090"}


id: GO:1900862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cordyol C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of cordyol C biosynthetic process","termid":"GO:1900861"},{"relation_name":"negatively_regulates","term_name":"cordyol C biosynthetic process","termid":"GO:1900799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cordyol C biosynthetic process","synonyms":[{"name":"down regulation of cordyol C biosynthetic process","type":"exact"},{"name":"down-regulation of cordyol C biosynthetic process","type":"exact"},{"name":"downregulation of cordyol C biosynthetic process","type":"exact"}],"termid":"GO:1900862"}


id: GO:0099142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when ATP has been bound by the channel complex or one of its constituent parts on the intracellular side of the plasma membrane.","definition_xrefs":["PMID:9755289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly ligand-gated monoatomic ion channel activity","termid":"GO:0005217"},{"relation_name":"is_a","term_name":"ATP-gated ion channel activity","termid":"GO:0035381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"intracellularly ATP-gated ion channel activity","termid":"GO:0099142"}


id: PBO:0112395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein She9/Mdm33","termid":"PBO:0112395"}


id: GO:0038004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process leading to the attainment of the full functional capacity of a ligand for an epidermal growth factor receptor. The ligand is functional when it can bind to and activate an epidermal growth factor receptor.","definition_xrefs":["GOC:signaling","PMID:11672525","PMID:11672524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"epidermal growth factor receptor ligand maturation","secondary_identifiers":["GO:0038005"],"synonyms":[{"name":"EGFR ligand maturation","type":"exact"},{"name":"EGFR ligand maturation by peptide bond cleavage","type":"narrow"},{"name":"EGFR ligand processing","type":"narrow"},{"name":"epidermal growth factor receptor ligand processing","type":"related"},{"name":"peptide bond cleavage involved in EGFR ligand maturation","type":"narrow"},{"name":"peptide bond cleavage involved in epidermal growth factor receptor ligand maturation","type":"related"}],"termid":"GO:0038004"}


id: GO:0018531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-6-hydroxynicotine + H2O + O2 = 6-hydroxypseudooxynicotine + H2O2.","definition_xrefs":["EC:1.5.3.5","RHEA:11880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(S)-6-hydroxynicotine oxidase activity","secondary_identifiers":["KEGG_REACTION:R03202","MetaCyc:S-6-HYDROXYNICOTINE-OXIDASE-RXN","UM-BBD_reactionID:r0478"],"synonyms":[{"name":"(S)-6-hydroxynicotine:oxygen oxidoreductase activity","type":"related"},{"name":"6-hydroxy-L-nicotine oxidase activity","type":"exact"},{"name":"6-hydroxy-L-nicotine:oxygen oxidoreductase activity","type":"related"},{"name":"L-6-hydroxynicotine oxidase activity","type":"exact"}],"termid":"GO:0018531"}


id: MONDO:0859765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibromatosis/schwannomatosis","termid":"MONDO:0859008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic schwannomatosis","secondary_identifiers":["Orphanet:634492","MEDGEN:1843393","UMLS:C5816779"],"termid":"MONDO:0859765","xrefs":{"Monarch":{"xref_id":"0859765"}}}


id: GO:0008344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Locomotory behavior in a fully developed and mature organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"},{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult locomotory behavior","synonyms":[{"name":"adult locomotory behaviour","type":"exact"}],"termid":"GO:0008344"}


id: GO:0120083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subcompartment of the rough endoplasmic reticulum consisting of lumenal expansion into a flattened, disc-shaped cavity.","definition_xrefs":["GOC:sl","PMID:12112448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum","termid":"GO:0005791"},{"relation_name":"part_of","term_name":"endoplasmic reticulum cisternal network","termid":"GO:0071781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"rough endoplasmic reticulum cisterna","termid":"GO:0120083"}


id: PBO:0085145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase; methylates adenine (m1A) of large subunit (LSU) rRNA at position 645; involved in pre-rRNA cleavage at site A2; mutation is synthetically lethal with gar1 mutation; deletion disrupts telomere maintenance by influencing expression of neighboring gene STN1; mammalian homolog nucleomethylin has been linked to nutrient availability signaling pathways and obesity","termid":"PBO:0085145"}


id: PBO:0080093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase like 1","termid":"PBO:0080093"}


id: PBO:0057649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1244-2","termid":"PBO:0057649"}


id: GO:0075157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its G protein-coupled receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G protein-coupled receptor signaling pathway in response to host (obsolete GO:0075157)","synonyms":[{"name":"positive regulation of G-protein coupled receptor protein signaling pathway in response to host","type":"exact"},{"name":"positive regulation of G-protein coupled receptor protein signalling pathway in response to host","type":"exact"},{"name":"positive regulation of symbiont G-protein coupled receptor protein-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075157"}


id: SO:0000280
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_gene","synonyms":[{"name":"engineered gene","type":"exact"}],"termid":"SO:0000280"}


id: PBO:0060855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEK2 pseudogene 3","termid":"PBO:0060855"}


id: MONDO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dyskinetic cerebral palsy (obsolete MONDO:0000399)","termid":"MONDO:0000399","xrefs":{"Monarch":{"xref_id":"0000399"}}}


id: MONDO:0004090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the vulva and is characterized by the presence of nests of malignant basaloid cells with a scant amount of cytoplasm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basaloid squamous cell carcinoma","termid":"MONDO:0003486"},{"relation_name":"is_a","term_name":"vulvar squamous cell carcinoma","termid":"MONDO:0024609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar basaloid squamous cell carcinoma","secondary_identifiers":["DOID:7048","MEDGEN:384496","UMLS:C2211850","NCIT:C40286"],"synonyms":[{"name":"vulvar basaloid carcinoma","type":"exact"},{"name":"vulvar basaloid squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0004090","xrefs":{"Monarch":{"xref_id":"0004090"}}}


id: FYPO:0005862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which MTREC complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:26942678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished MTREC complex binding","synonyms":[{"name":"MTREC complex binding abolished","type":"exact"},{"name":"abolished NURS complex binding","type":"exact"}],"termid":"FYPO:0005862"}


id: GO:0035222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process giving rise to the pattern of cell differentiation in the wing imaginal disc.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"part_of","term_name":"wing disc development","termid":"GO:0035220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc pattern formation","termid":"GO:0035222"}


id: PR:000044778
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proliferating cell nuclear antigen K63-polyubiquitinated form in Schizosaccharomyces pombe. Example: UniProtKB:Q03392, Lys-164, PR:000044772.","definition_xrefs":["PRO:DAN","PMID:16641370","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pcn1/Ubiq(K164)","termid":"PR:000044776"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pcn1/K63polyUbiq:(K164)","pombase_gene_id":"SPBC16D10.09","synonyms":[{"name":"K63-polyubiquitinated PCNA (Schizosaccharomyces pombe)","type":"exact"},{"name":"PCNA K63-polyubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"PCNA polyubiquitinated form (Schizosaccharomyces pombe)","type":"related"},{"name":"PomBase_original_PRO_term_name: proliferating cell nuclear antigen K63-polyubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-PCNA/K63polyUbiq+","type":"exact"},{"name":"pcn1/K63polyUbiq:(K164)","type":"exact"}],"termid":"PR:000044778"}


id: FYPO:0003861
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the pH of a growth medium in which a cell population grows to stationary phase decreases to a normal (i.e. indistinguishable from wild type) extent.","definition_xrefs":["PomBase:mah","PMID:23874875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal acidification of growth medium in stationary phase","termid":"FYPO:0003861"}


id: MONDO:1010574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, dog","secondary_identifiers":["OMIA:000279-9615"],"termid":"MONDO:1010574","xrefs":{"Monarch":{"xref_id":"1010574"}}}


id: GO:0015514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrite from the inside of the cell to the outside of the cell across a membrane.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrite transmembrane transporter activity","termid":"GO:0015113"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"},{"relation_name":"is_a","term_name":"efflux transmembrane transporter activity","termid":"GO:0015562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"nitrite efflux transmembrane transporter activity","synonyms":[{"name":"nitrite extrusion permease activity","type":"exact"}],"termid":"GO:0015514"}


id: PR:P21537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P21537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit 9, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.10","synonyms":[{"name":"Spom972h-atp9","type":"exact"},{"name":"lipid-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P21537"}


id: GO:0021622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the oculomotor nerve is generated and organized. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["ISBN:0838580343","GOC:jid","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"oculomotor nerve development","termid":"GO:0021557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve morphogenesis","synonyms":[{"name":"CN III morphogenesis","type":"related"}],"termid":"GO:0021622"}


id: GO:0007483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the genital disc are generated and organized. This includes the transformation of a genital imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into the recognizable adult genital structures, the anal plates and the hind gut.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"genital disc development","termid":"GO:0035215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genital disc morphogenesis","synonyms":[{"name":"genital disc metamorphosis","type":"exact"}],"termid":"GO:0007483"}


id: PBO:0080962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 5","termid":"PBO:0080962"}


id: GO:2000728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA export from nucleus in response to heat stress.","definition_xrefs":["PMID:15210706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA export from nucleus","termid":"GO:0010793"},{"relation_name":"is_a","term_name":"regulation of cellular response to heat","termid":"GO:1900034"},{"relation_name":"regulates","term_name":"mRNA export from nucleus in response to heat stress","termid":"GO:0031990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA export from nucleus in response to heat stress","synonyms":[{"name":"regulation of mRNA export from cell nucleus during heat stress","type":"exact"},{"name":"regulation of mRNA export from nucleus during heat stress","type":"related"}],"termid":"GO:2000728"}


id: PBO:0043779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A5","termid":"PBO:0043779"}


id: PATO:0000913
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000913 qualitative value (obsolete PATO:0000913)","termid":"PATO:0000913"}


id: GO:0045863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving pteridine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"negatively_regulates","term_name":"pteridine metabolic process","termid":"GO:0019889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pteridine metabolic process","synonyms":[{"name":"down regulation of pteridine metabolic process","type":"exact"},{"name":"down-regulation of pteridine metabolic process","type":"exact"},{"name":"downregulation of pteridine metabolic process","type":"exact"},{"name":"inhibition of pteridine metabolic process","type":"narrow"},{"name":"negative regulation of pteridine metabolism","type":"exact"}],"termid":"GO:0045863"}


id: PBO:0031353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_rapamycin","termid":"PBO:0031353"}


id: GO:0009020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing 2'-O-methylguanosine.","definition_xrefs":["EC:2.1.1.34","RHEA:20077"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA (guanosine-2'-O-)-methyltransferase activity (obsolete GO:0009020)","termid":"GO:0009020"}


id: GO:0004439
data:
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id: PBO:0004169
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id: PBO:0088088
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id: MONDO:0800250
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id: MONDO:0100572
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id: PBO:0036448
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id: GO:0003803
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id: PATO:0001123
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id: PBO:0108622
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id: PBO:0047700
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id: MONDO:0006405
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id: PBO:0057148
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id: GO:1902872
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id: MOD:01312
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id: PBO:0063368
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id: MONDO:0015159
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disability","type":"exact"}],"termid":"MONDO:0015159","terms_by_termid":{"MONDO:0007387":null,"MONDO:0007617":null,"MONDO:0007621":null,"MONDO:0007843":null,"MONDO:0008684":null,"MONDO:0008879":null,"MONDO:0009026":null,"MONDO:0009479":null,"MONDO:0009485":null,"MONDO:0009514":null,"MONDO:0009622":null,"MONDO:0009736":null,"MONDO:0009910":null,"MONDO:0010035":null,"MONDO:0010221":null,"MONDO:0010286":null,"MONDO:0010306":null,"MONDO:0010355":null,"MONDO:0010370":null,"MONDO:0010465":null,"MONDO:0010466":null,"MONDO:0010477":null,"MONDO:0010485":null,"MONDO:0010496":null,"MONDO:0010574":null,"MONDO:0010655":null,"MONDO:0011053":null,"MONDO:0011213":null,"MONDO:0011365":null,"MONDO:0011402":null,"MONDO:0011640":null,"MONDO:0012099":null,"MONDO:0012399":null,"MONDO:0012516":null,"MONDO:0012555":null,"MONDO:0013256":null,"MONDO:0013563":null,"MONDO:0013578":null,"MONDO:0013812":null,"MONDO:0013819":null,"MONDO:0013820":null,"MONDO:0013821":null,"MONDO:0013864":null,"MONDO:0014112":null,"MONDO:0014113":null,"MONDO:0014114":null,"MONDO:0014165":null,"MONDO:0014238":null,"MONDO:0014273":null,"MONDO:0014296":null,"MONDO:0014336":null,"MONDO:0014466":null,"MONDO:0014529":null,"MONDO:0014558":null,"MONDO:0014601":null,"MONDO:0014602":null,"MONDO:0014605":null,"MONDO:0014609":null,"MONDO:0014700":null,"MONDO:0014716":null,"MONDO:0014751":null,"MONDO:0014757":null,"MONDO:0014838":null,"MONDO:0014848":null,"MONDO:0014881":null,"MONDO:0014886":null,"MONDO:0014936":null,"MONDO:0015012":null,"MONDO:0024567":null,"MONDO:0026763":null,"MONDO:0030886":null,"MONDO:0030912":null,"MONDO:0032702":null,"MONDO:0032787":null,"MONDO:0032808":null,"MONDO:0032912":null,"MONDO:0034106":null,"MONDO:0044319":null,"MONDO:0044646":null,"MONDO:0044701":null,"MONDO:0054636":null,"MONDO:0060502":null,"MONDO:0060568":null,"MONDO:0060627":null,"MONDO:0957921":null},"xrefs":{"Monarch":{"xref_id":"0015159"}}}


id: PBO:0065519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 1","termid":"PBO:0065519"}


id: GO:0033698
data:
  {"annotated_genes":["SJAG_00441","SJAG_02981","SJAG_03867","SJAG_00868","SJAG_03230","SJAG_02439","SJAG_04576","SJAG_03255","SJAG_04758","SJAG_03441","SJAG_01230","SJAG_00581","SJAG_02846"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76072,76295,76369,77619,79354,80646,89430,94972,103119,105385,107112,109834,114617],"is_not":false,"summary":null,"term":"GO:0033698"}]},"cv_name":"cellular_component","definition":"A histone deacetylase complex which deacetylates histones preferentially in promoter regions. Composed of a two copies of catalytic histone deacetylase subunit (S. pombe Clr6/ S. cerevisiae Rpd3p), an Sds-3 family protein (S. pombe /S. cerevisiae Sds3(p) ), two copies of SIN3 family co-repressor (S. pombe Pst1/ S. cerevisiae Sin3p, a WD repeat protein/ histone chaperone (S. pombe Prw1/ S. cerevisiae Ume1p), and a zf- PHD finger ( S. pombe Png2/ S. cerevisiae Pho23p), plus 4 additional subunits, and associated factors.","definition_xrefs":["PMID:17450151","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sin3-type complex","termid":"GO:0070822"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00441":null,"SJAG_00581":null,"SJAG_00868":null,"SJAG_01230":null,"SJAG_02439":null,"SJAG_02846":null,"SJAG_02981":null,"SJAG_03230":null,"SJAG_03255":null,"SJAG_03441":null,"SJAG_03867":null,"SJAG_04576":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0032991","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"Rpd3L complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000508"],"synonyms":[{"name":"Clr6 histone deacetylase complex I/I'","type":"exact"},{"name":"Clr6L complex","type":"exact"},{"name":"Rpd3C(L)","type":"exact"},{"name":"Sin3L complex","type":"exact"}],"termid":"GO:0033698","terms_by_termid":{"GO:0033698":null}}


id: PBO:0043941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod homeobox","termid":"PBO:0043941"}


id: GO:0044335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in neural crest cell differentiation.","definition_xrefs":["GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in neural crest cell differentiation (obsolete GO:0044335)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in neural crest cell differentiation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in neural crest cell differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in neural crest cell differentiation","type":"exact"}],"termid":"GO:0044335"}


id: PBO:0084457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase in the N-linked glycosylation pathway; catalyzes two consecutive steps in N-linked glycosylation pathway; mutants exhibit temperature-sensitive growth and abnormal accumulation of lipid-linked oligosaccharide Man2GlcNAc2-PP-Dol; mutations of human ALG2 cause congenital myasthenic syndrome; human ALG2 complements temperature sensitivity and dolichol-linked oligosaccharide biosynthesis defect of alg2-1 mutant, but mutant form from a patient with CDG-Ii fails to complement","termid":"PBO:0084457"}


id: PBO:0067040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 57, pseudogene","termid":"PBO:0067040"}


id: GO:0005328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: neurotransmitter(out) + Na+(out) = neurotransmitter(in) + Na+(in).","definition_xrefs":["TC:2.A.22.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter transmembrane transporter activity","termid":"GO:0005326"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"neurotransmitter:sodium symporter activity","synonyms":[{"name":"sodium/neurotransmitter symporter activity","type":"exact"}],"termid":"GO:0005328"}


id: MONDO:0100047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing basal cell carcinoma.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal cell carcinoma, susceptibility to","termid":"MONDO:0100047","xrefs":{"Monarch":{"xref_id":"0100047"}}}


id: FYPO:0002489
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a spore lyses, i.e. the plasma membrane ruptures and cytoplasm is lost. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable spore","termid":"FYPO:0002151"},{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"},{"relation_name":"is_a","term_name":"cell lysis","termid":"FYPO:0002488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"spore lysis","synonyms":[{"name":"inviable, lysed spore","type":"exact"},{"name":"spore cytolysis","type":"exact"}],"termid":"FYPO:0002489"}


id: MONDO:0011821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Meckel syndrome in which the cause of the disease is a mutation in the TMEM67 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel syndrome, type 3","secondary_identifiers":["OMIM:607361","MEDGEN:335402","MESH:C536132","DOID:0070117","UMLS:C1846357","GARD:8744"],"synonyms":[{"name":"MKS3","type":"exact"},{"name":"Meckel syndrome 3","type":"related"},{"name":"Meckel syndrome caused by mutation in TMEM67","type":"exact"},{"name":"Meckel syndrome type 3","type":"related"},{"name":"Meckel syndrome, type 3","type":"exact"},{"name":"Meckel-Gruber syndrome, type 3","type":"exact"},{"name":"TMEM67 Meckel syndrome","type":"exact"}],"termid":"MONDO:0011821","xrefs":{"Monarch":{"xref_id":"0011821"}}}


id: PBO:0005388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper binding protein of the mitchondrial inner membrane Cmc2 (predicted)","termid":"PBO:0005388"}


id: PBO:0117395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p25","termid":"PBO:0117395"}


id: PBO:0042971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 10","termid":"PBO:0042971"}


id: PBO:0089950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm4","termid":"PBO:0089950"}


id: MONDO:0005056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Squamous cell carcinomas with morphologically prominent production of keratin.","definition_xrefs":["NCIT:C4105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"keratinizing squamous cell carcinoma","secondary_identifiers":["MEDGEN:137730","ICDO:8071/3","UMLS:C0334247","EFO:0000559","DOID:5521"],"synonyms":[{"name":"keratinizing epidermoid carcinoma","type":"exact"},{"name":"keratinizing squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma, keratinizing","type":"exact"},{"name":"squamous cell carcinoma, keratinizing (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0005056","xrefs":{"Monarch":{"xref_id":"0005056"}}}


id: MOD:00854
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine to L-lysinium (protonated L-lysine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"protonated residue","termid":"MOD:01699"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-lysine (L-lysinium) residue","termid":"MOD:00854"}


id: PBO:0057306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516a-1","termid":"PBO:0057306"}


id: GO:0030962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The dihydroxylation of peptidyl-arginine to form peptidyl-3,4-dihydroxy-L-arginine.","definition_xrefs":["PMID:10978343","RESID:AA0369"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-arginine dihydroxylation to peptidyl-3,4-dihydroxy-L-arginine (obsolete GO:0030962)","termid":"GO:0030962"}


id: PBO:0043722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 1","termid":"PBO:0043722"}


id: PBO:0041331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 92","termid":"PBO:0041331"}


id: PBO:0088961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2A regulatory subunit, PTPA family Ypa1","termid":"PBO:0088961"}


id: PR:O14217
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import receptor subunit TOM70 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import receptor subunit tom70 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.12","secondary_identifiers":["UniProtKB:O14217"],"synonyms":[{"name":"Spom972h-TOMM70A","type":"exact"},{"name":"translocase of outer membrane 40 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14217"}


id: FYPO:0005682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule depolymerization, i.e. the removal of tubulin dimers, occurs to a lesser extent than normal.","definition_xrefs":["PomBase:mah","GO:0007019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"},{"relation_name":"is_a","term_name":"decreased microtubule polymerization or depolymerization","termid":"FYPO:0000904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased microtubule depolymerization during vegetative growth","synonyms":[{"name":"decreased microtubule catastrophe during vegetative growth","type":"related"},{"name":"decreased microtubule depolymerisation during vegetative growth","type":"exact"},{"name":"decreased microtubule depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased microtubule shrinkage during vegetative growth","type":"related"},{"name":"reduced microtubule depolymerization during vegetative growth","type":"exact"}],"termid":"FYPO:0005682"}


id: PR:Q10480
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pnu1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclease 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.08","synonyms":[{"name":"SpNUC1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pnu1","type":"exact"}],"termid":"PR:Q10480"}


id: PBO:0052998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit beta 2 pseudogene 1","termid":"PBO:0052998"}


id: GO:0044407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which microorganisms of the same species attach to and grow in or on a host species, and produce extracellular polymers that facilitate attachment and matrix formation, resulting in a change in the microorganisms' growth rate and gene transcription. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-species biofilm formation","termid":"GO:0044010"},{"relation_name":"is_a","term_name":"adhesion of symbiont to host","termid":"GO:0044406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-species biofilm formation in or on host organism","termid":"GO:0044407"}


id: MONDO:0019861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thyroid hypoplasia is a form of thyroid dysgenesis characterized by incomplete development of the thyroid gland that results in primary congenital hypothyroidism, a permanent thyroid deficiency that is present from birth.","definition_xrefs":["Orphanet:95720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generalized resistance to thyroid hormone","termid":"MONDO:0009043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"thyroid hypoplasia","secondary_identifiers":["icd11.foundation:936952450","MedDRA:10065938","MEDGEN:57720","GARD:8426","UMLS:C0151516"],"termid":"MONDO:0019861","xrefs":{"Monarch":{"xref_id":"0019861"}}}


id: PBO:0063294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 8 pseudogene","termid":"PBO:0063294"}


id: PBO:0073633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 18, pseudogene","termid":"PBO:0073633"}


id: PBO:0059890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 13","termid":"PBO:0059890"}


id: PBO:0085781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the mitochondrial outer surface; links the Arp2/3 complex with the mitochondria during anterograde mitochondrial movement; also binds to and promotes degradation of mRNAs for select nuclear-encoded mitochondrial proteins; translationally represses oxidative stress-linked genes; regulates CoQ biosynthesis","termid":"PBO:0085781"}


id: PBO:0047399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 38","termid":"PBO:0047399"}


id: GO:1901556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a candesartan stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to candesartan","termid":"GO:1901556"}


id: GO:0051137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer T cell differentiation.","definition_xrefs":["PMID:9133426","ISBN:0781735149","PMID:12154375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell differentiation","termid":"GO:0046639"},{"relation_name":"is_a","term_name":"regulation of NK T cell differentiation","termid":"GO:0051136"},{"relation_name":"negatively_regulates","term_name":"NK T cell differentiation","termid":"GO:0001865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of NK T cell differentiation","synonyms":[{"name":"down regulation of NK T cell differentiation","type":"exact"},{"name":"down-regulation of NK T cell differentiation","type":"exact"},{"name":"downregulation of NK T cell differentiation","type":"exact"},{"name":"inhibition of NK T cell differentiation","type":"narrow"},{"name":"negative regulation of NK T cell development","type":"related"},{"name":"negative regulation of NK T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of NK T-cell differentiation","type":"exact"},{"name":"negative regulation of NK T-lymphocyte differentiation","type":"exact"},{"name":"negative regulation of NKT cell differentiation","type":"exact"},{"name":"negative regulation of NT cell differentiation","type":"exact"},{"name":"negative regulation of natural T cell differentiation","type":"exact"},{"name":"negative regulation of natural killer T cell differentiation","type":"exact"}],"termid":"GO:0051137"}


id: PBO:0090424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transketolase Tkt1","termid":"PBO:0090424"}


id: PBO:0069230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 485, pseudogene","termid":"PBO:0069230"}


id: PBO:0080618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 54","termid":"PBO:0080618"}


id: PBO:0055966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and coiled-coil centrosomal protein 1","termid":"PBO:0055966"}


id: PBO:0017995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E1 Atg8 and Atg12 E1 activating enzyme Atg7 (predicted)","termid":"PBO:0017995"}


id: MONDO:0024266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any patent ductus arteriosus in which the cause of the disease is a mutation in the PRDM6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patent ductus arteriosus","termid":"MONDO:0011827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"patent ductus arteriosus 3","secondary_identifiers":["OMIM:617039","UMLS:C4310753","GARD:18490","MEDGEN:934720"],"synonyms":[{"name":"PDA3","type":"exact"},{"name":"PRDM6 patent ductus arteriosus","type":"exact"},{"name":"patent ductus arteriosus 3","type":"exact"},{"name":"patent ductus arteriosus caused by mutation in PRDM6","type":"exact"}],"termid":"MONDO:0024266","xrefs":{"Monarch":{"xref_id":"0024266"}}}


id: MONDO:1012685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy that occurs in dogs due to a mutation in NPHP4 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy, non-human animal","termid":"MONDO:1012582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod dystrophy, NPHP4-related, dog","secondary_identifiers":["OMIA:001455-9615"],"synonyms":[{"name":"cone-rod dystrophy in Standard Wire-haired Dachshund","type":"narrow"}],"termid":"MONDO:1012685","xrefs":{"Monarch":{"xref_id":"1012685"}}}


id: MONDO:1011907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephropathy, non-human animal","secondary_identifiers":["OMIA:000710"],"termid":"MONDO:1011907","xrefs":{"Monarch":{"xref_id":"1011907"}}}


id: PBO:0017884
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae FPR1","termid":"PBO:0017884"}


id: PBO:0071565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 31","termid":"PBO:0071565"}


id: PBO:0079816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like with PHD and ring finger domains 2 pseudogene 1","termid":"PBO:0079816"}


id: PBO:0050504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C cluster","termid":"PBO:0050504"}


id: PR:P0CT65
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1602 gene.","definition_xrefs":["UniProtKB:P0CT65","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S16-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.04c","synonyms":[{"name":"Spom972h-rps1602","type":"exact"}],"termid":"PR:P0CT65"}


id: PBO:0050903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFI30 lysosomal thiol reductase","termid":"PBO:0050903"}


id: PBO:0045035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disrupted in schizophrenia 2","termid":"PBO:0045035"}


id: MONDO:0004382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the larynx. Representative examples include laryngitis, vocal cord polyp, squamous papilloma, and carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"upper respiratory tract disorder","termid":"MONDO:0004867"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal disorder","secondary_identifiers":["ICD9:478.70","MEDGEN:7268","EFO:0009673","DOID:786","NCIT:C26810","SCTID:60600009","MESH:D007818","UMLS:C0023051"],"synonyms":[{"name":"disease of larynx","type":"exact"},{"name":"disease or disorder of larynx","type":"exact"},{"name":"disorder of larynx","type":"exact"},{"name":"disorder of the larynx","type":"exact"},{"name":"laryngeal disease","type":"exact"},{"name":"laryngeal disorder","type":"exact"},{"name":"larynx disease","type":"exact"},{"name":"larynx disease or disorder","type":"exact"}],"termid":"MONDO:0004382","xrefs":{"Monarch":{"xref_id":"0004382"}}}


id: GO:0044270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of organic and inorganic nitrogenous compounds.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular nitrogen compound catabolic process (obsolete GO:0044270)","termid":"GO:0044270"}


id: PBO:0066356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 3","termid":"PBO:0066356"}


id: GO:0016662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces a cytochrome.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","secondary_identifiers":["EC:1.7.2.-"],"termid":"GO:0016662"}


id: PBO:0081461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 330","termid":"PBO:0081461"}


id: GO:0051153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of striated muscle cell differentiation.","definition_xrefs":["CL:0000737","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle cell differentiation","termid":"GO:0051147"},{"relation_name":"regulates","term_name":"striated muscle cell differentiation","termid":"GO:0051146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle cell differentiation","termid":"GO:0051153"}


id: PBO:0074582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 2A","termid":"PBO:0074582"}


id: GO:0010363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any endogenous process that modulates the frequency, rate or extent of the plant hypersensitive response.","definition_xrefs":["PMID:16255244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"plant-type hypersensitive response","termid":"GO:0009626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plant-type hypersensitive response","synonyms":[{"name":"regulation of HR","type":"exact"},{"name":"regulation of HR-PCD","type":"exact"},{"name":"regulation of plant hypersensitive response","type":"exact"}],"termid":"GO:0010363"}


id: GO:0003924
data:
  {"annotated_genes":["SJAG_04343","SJAG_00923","SJAG_04157","SJAG_03915","SJAG_02856","SJAG_01277","SJAG_01774","SJAG_01655","SJAG_03342","SJAG_03371","SJAG_02595","SJAG_04004","SJAG_00430","SJAG_02331","SJAG_03688","SJAG_02171","SJAG_00663","SJAG_00906","SJAG_04531","SJAG_04375","SJAG_04470","SJAG_02353","SJAG_03072","SJAG_00031","SJAG_02848","SJAG_02292","SJAG_00659","SJAG_01929","SJAG_02640","SJAG_03374","SJAG_02265","SJAG_00226","SJAG_01449","SJAG_02656","SJAG_02824","SJAG_00065","SJAG_02444","SJAG_00457","SJAG_01438","SJAG_04940","SJAG_00414","SJAG_01851","SJAG_01339","SJAG_04862","SJAG_02366","SJAG_03732","SJAG_03684","SJAG_03461","SJAG_00231","SJAG_00466","SJAG_01456","SJAG_00344","SJAG_02684","SJAG_04003","SJAG_02601","SJAG_03137","SJAG_02233","SJAG_05332","SJAG_04509","SJAG_01558","SJAG_00983","SJAG_04351","SJAG_05030","SJAG_03846","SJAG_04679","SJAG_02180","SJAG_00424","SJAG_01379","SJAG_03453","SJAG_02384","SJAG_03676","SJAG_04666","SJAG_02302","SJAG_02605","SJAG_01696","SJAG_01391","SJAG_01769"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58143,59675,60495,61121,61475,63193,64502,65524,65761,66416,67041,67063,67849,67873,69782,69989,70298,70616,70621,71058,71260,71455,71718,71789,71874,71942,72619,72834,72902,73108,73268,73709,73735,74425,74638,74684,74746,75027,75115,75270,75534,75764,76078,76243,76380,76621,76847,77256,77351,77660,77679,77695,77846,78071,78121,78260,78758,79689,80072,80120,80486,80637,80699,80703,96428,98626,99975,101580,103917,107803,114349,118881],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[69926,91181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003925"},{"annotations":[105009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061791"},{"annotations":[100302,103112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990606"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + H2O = GDP + H+ + phosphate.","definition_xrefs":["PMID:27218782","PMID:26832457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside triphosphate phosphatase activity","termid":"GO:0017111"}],"gene_count":77,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00065":null,"SJAG_00226":null,"SJAG_00231":null,"SJAG_00344":null,"SJAG_00414":null,"SJAG_00424":null,"SJAG_00430":null,"SJAG_00457":null,"SJAG_00466":null,"SJAG_00659":null,"SJAG_00663":null,"SJAG_00906":null,"SJAG_00923":null,"SJAG_00983":null,"SJAG_01277":null,"SJAG_01339":null,"SJAG_01379":null,"SJAG_01391":null,"SJAG_01438":null,"SJAG_01449":null,"SJAG_01456":null,"SJAG_01558":null,"SJAG_01655":null,"SJAG_01696":null,"SJAG_01769":null,"SJAG_01774":null,"SJAG_01851":null,"SJAG_01929":null,"SJAG_02171":null,"SJAG_02180":null,"SJAG_02233":null,"SJAG_02265":null,"SJAG_02292":null,"SJAG_02302":null,"SJAG_02331":null,"SJAG_02353":null,"SJAG_02366":null,"SJAG_02384":null,"SJAG_02444":null,"SJAG_02595":null,"SJAG_02601":null,"SJAG_02605":null,"SJAG_02640":null,"SJAG_02656":null,"SJAG_02684":null,"SJAG_02824":null,"SJAG_02848":null,"SJAG_02856":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03342":null,"SJAG_03371":null,"SJAG_03374":null,"SJAG_03453":null,"SJAG_03461":null,"SJAG_03676":null,"SJAG_03684":null,"SJAG_03688":null,"SJAG_03732":null,"SJAG_03846":null,"SJAG_03915":null,"SJAG_04003":null,"SJAG_04004":null,"SJAG_04157":null,"SJAG_04343":null,"SJAG_04351":null,"SJAG_04375":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04531":null,"SJAG_04666":null,"SJAG_04679":null,"SJAG_04862":null,"SJAG_04940":null,"SJAG_05030":null,"SJAG_05332":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"GTPase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-156923","Reactome:R-HSA-9640195","Reactome:R-HSA-9649736","Reactome:R-HSA-170686","Reactome:R-HSA-1445143","Reactome:R-HSA-432707","Reactome:R-HSA-8854255","Reactome:R-HSA-8849082","Reactome:R-HSA-5694527","Reactome:R-HSA-5638006","Reactome:R-HSA-8847883","Reactome:R-HSA-6814833","Reactome:R-HSA-421835","Reactome:R-HSA-167415","Reactome:R-HSA-555065","Reactome:R-HSA-5665809","Reactome:R-HSA-8868661","Reactome:R-HSA-203973","Reactome:R-HSA-165055","Reactome:R-HSA-9018814","RHEA:19669","Reactome:R-HSA-5672017","Reactome:R-HSA-983422","Reactome:R-HSA-418582","Reactome:R-HSA-8854612","Reactome:R-HSA-5389842","Reactome:R-HSA-170685","Reactome:R-HSA-5389839","Reactome:R-HSA-5419279","Reactome:R-HSA-8854173","Reactome:R-HSA-5623513","Reactome:R-HSA-1458485","Reactome:R-HSA-8981353","GO:0061745","Reactome:R-HSA-8847534","Reactome:R-HSA-2130725","Reactome:R-HSA-6807877","Reactome:R-HSA-5419273","Reactome:R-HSA-5658231","Reactome:R-HSA-164381","Reactome:R-HSA-8982020","Reactome:R-HSA-177501","Reactome:R-HSA-170666","Reactome:R-HSA-5333615","Reactome:R-HSA-380979","Reactome:R-HSA-8854329","Reactome:R-HSA-2130641","Reactome:R-HSA-8854604","Reactome:R-HSA-8982025","Reactome:R-HSA-9645598","Reactome:R-HSA-8982021","Reactome:R-HSA-2584246","Reactome:R-HSA-392212","Reactome:R-HSA-428941","Reactome:R-HSA-418574","MetaCyc:RXN0-5462","Reactome:R-HSA-392133","Reactome:R-HSA-9018826"],"synonyms":[{"name":"ARF small monomeric GTPase activity","type":"narrow"},{"name":"GTPase activity, coupled","type":"related"},{"name":"RHEB small monomeric GTPase activity","type":"narrow"},{"name":"Rab small monomeric GTPase activity","type":"narrow"},{"name":"Ran small monomeric GTPase activity","type":"narrow"},{"name":"Ras small monomeric GTPase activity","type":"narrow"},{"name":"Rho small monomeric GTPase activity","type":"narrow"},{"name":"Sar small monomeric GTPase activity","type":"narrow"},{"name":"dynamin GTPase activity","type":"narrow"},{"name":"heterotrimeric G-protein GTPase activity","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, alpha-subunit","type":"related"},{"name":"heterotrimeric G-protein GTPase, beta-subunit","type":"related"},{"name":"heterotrimeric G-protein GTPase, gamma-subunit","type":"related"},{"name":"hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement","type":"broad"},{"name":"protein-synthesizing GTPase activity","type":"narrow"},{"name":"protein-synthesizing GTPase activity, elongation","type":"narrow"},{"name":"protein-synthesizing GTPase activity, initiation","type":"narrow"},{"name":"protein-synthesizing GTPase activity, termination","type":"narrow"},{"name":"signal-recognition-particle GTPase activity","type":"narrow"},{"name":"small monomeric GTPase activity","type":"narrow"},{"name":"tubulin GTPase activity","type":"narrow"}],"termid":"GO:0003924","terms_by_termid":{"GO:0003924":null,"GO:0003925":null,"GO:0061791":null,"GO:1990606":null}}


id: PBO:0048270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALNT7 divergent transcript","termid":"PBO:0048270"}


id: PBO:0086017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the mitochondria; mRNA identified as translated by ribosome profiling data; MMO1 is a non-essential gene","termid":"PBO:0086017"}


id: MONDO:0005253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"High-output heart failure is a heart condition that occurs when the cardiac output is higher than normal.","definition_xrefs":["EFO:0003145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart failure","termid":"MONDO:0005252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"high output heart failure","secondary_identifiers":["Wikipedia:High-output_cardiac_failure","SCTID:10091002","MEDGEN:526135","UMLS:C0221045"],"termid":"MONDO:0005253","xrefs":{"Monarch":{"xref_id":"0005253"}}}


id: PBO:0090380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly frataxin Fxn1","termid":"PBO:0090380"}


id: PBO:0039215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C6, pseudogene","termid":"PBO:0039215"}


id: GO:0021663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to rhombomere 4. This process pertains to the initial formation of a structure from unspecified parts. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:jid","GOC:cls","GOC:curators","GOC:dgh","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere formation","termid":"GO:0021594"},{"relation_name":"part_of","term_name":"rhombomere 4 morphogenesis","termid":"GO:0021661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 formation","termid":"GO:0021663"}


id: PBO:0067835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 137","termid":"PBO:0067835"}


id: PBO:0036523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, galactose-specific flocculin Gsf2","termid":"PBO:0036523"}


id: GO:0032373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of sterols into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of sterol transport","termid":"GO:0032371"},{"relation_name":"positively_regulates","term_name":"sterol transport","termid":"GO:0015918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of sterol transport","synonyms":[{"name":"activation of sterol transport","type":"narrow"},{"name":"stimulation of sterol transport","type":"narrow"},{"name":"up regulation of sterol transport","type":"exact"},{"name":"up-regulation of sterol transport","type":"exact"},{"name":"upregulation of sterol transport","type":"exact"}],"termid":"GO:0032373"}


id: MONDO:0013121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary congenital glaucoma","termid":"MONDO:0000365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 3, primary congenital, C","secondary_identifiers":["GARD:18225","MEDGEN:854718","OMIM:613085","UMLS:C3888011"],"synonyms":[{"name":"GLC3C","type":"exact"},{"name":"glaucoma 3, primary congenital, C","type":"exact"}],"termid":"MONDO:0013121","xrefs":{"Monarch":{"xref_id":"0013121"}}}


id: PBO:0074601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 11B","termid":"PBO:0074601"}


id: PBO:0051353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-4 (pseudogene)","termid":"PBO:0051353"}


id: PBO:0054687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2096","termid":"PBO:0054687"}


id: PBO:0054307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1699","termid":"PBO:0054307"}


id: GO:0031592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An amorphous structure surrounding the core of the centrosome, from which microtubules are nucleated; contains gamma-tubulin.","definition_xrefs":["GOC:kp","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"centrosome","termid":"GO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"centrosomal corona","termid":"GO:0031592"}


id: PBO:0057018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 106a","termid":"PBO:0057018"}


id: MONDO:0010817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the KCNQ4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 2A","secondary_identifiers":["UMLS:C2677637","DOID:0110558","OMIM:600101","MEDGEN:436997","MESH:C567441","GARD:18099"],"synonyms":[{"name":"DFNA2A","type":"narrow"},{"name":"KCNQ4 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 2A","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 2A","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in KCNQ4","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 2A","type":"narrow"},{"name":"deafness, autosomal dominant 2A","type":"narrow"},{"name":"deafness, autosomal dominant 2a","type":"narrow"},{"name":"deafness, autosomal dominant type 2A","type":"narrow"}],"termid":"MONDO:0010817","xrefs":{"Monarch":{"xref_id":"0010817"}}}


id: MONDO:0000192
data:
  {"annotated_genes":["SJAG_03150","SJAG_03149"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87060,87059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014526"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03149":null,"SJAG_03150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"polyglucosan body myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:615895"],"termid":"MONDO:0000192","terms_by_termid":{"MONDO:0014526":null},"xrefs":{"Monarch":{"xref_id":"0000192"}}}


id: PR:O74543
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A large neutral amino acids transporter small subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04743","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C777.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.04","secondary_identifiers":["UniProtKB:O74543"],"synonyms":[{"name":"Spom972h-SLC7A8","type":"exact"}],"termid":"PR:O74543"}


id: PR:000035414
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitotic checkpoint serine/threonine-protein kinase BUB1 unphosphorylated form in Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic checkpoint serine/threonine-protein kinase BUB1 unphosphorylated form (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.12c","synonyms":[{"name":"Spom972h-BUB1/PhosRes-","type":"exact"}],"termid":"PR:000035414"}


id: PBO:0082670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Dsl1p tethering complex; this complex interacts with ER SNAREs Sec20p and Use1p; mediates Sey1p-independent homotypic ER fusion; proposed to be involved in protein secretion; localizes to the ER and nuclear envelope","termid":"PBO:0082670"}


id: GO:0046231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of carbazole, a heterocyclic aromatic compound containing a dibenzopyrrole system that is produced during coal gasification and is present in cigarette smoke. Coal tar produced at high temperature contains an average of 1.5% carbazole. It is used widely in synthesis of dyes, pharmaceuticals, and plastics and is a suspected carcinogen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete carbazole biosynthetic process (obsolete GO:0046231)","synonyms":[{"name":"carbazole anabolism","type":"exact"},{"name":"carbazole biosynthesis","type":"exact"},{"name":"carbazole biosynthetic process","type":"exact"},{"name":"carbazole formation","type":"exact"},{"name":"carbazole synthesis","type":"exact"}],"termid":"GO:0046231"}


id: GO:0140744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of a lncRNA.","definition_xrefs":["PMID:33913806","PMID:33767452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"regulation of lncRNA transcription","termid":"GO:0140743"},{"relation_name":"negatively_regulates","term_name":"lncRNA transcription","termid":"GO:0140742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"negative regulation of lncRNA transcription","termid":"GO:0140744"}


