# terms

id: MONDO:0012319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major affective disorder 3","secondary_identifiers":["MEDGEN:351270","UMLS:C1864994","MESH:C566501","OMIM:609633"],"synonyms":[{"name":"MAFD3","type":"exact"},{"name":"MAJOR affective disorder 3","type":"related"},{"name":"bipolar affective disorder, early-onset","type":"related"},{"name":"major affective disorder 3","type":"exact"},{"name":"major affective disorder 3, early onset","type":"exact"}],"termid":"MONDO:0012319","xrefs":{"Monarch":{"xref_id":"0012319"}}}


id: PBO:0083036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta(9) fatty acid desaturase; required for monounsaturated fatty acid synthesis and for normal distribution of mitochondria","termid":"PBO:0083036"}


id: PBO:0089328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex protein phosphotransferase subunit Pan3","termid":"PBO:0089328"}


id: PBO:0029720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-bent_mitotic_spindle","termid":"PBO:0029720"}


id: GO:0044231
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized area of membrane of the host axon terminal that faces the plasma membrane of the host neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many host synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell synapse","termid":"GO:0044221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell presynaptic membrane","secondary_identifiers":["GO:0072556"],"synonyms":[{"name":"host cell pre-synaptic membrane","type":"exact"},{"name":"other organism pre-synaptic membrane","type":"related"},{"name":"other organism presynaptic membrane","type":"related"}],"termid":"GO:0044231"}


id: GO:0005734
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete box C + D snoRNP protein (obsolete GO:0005734)","synonyms":[{"name":"box C + D snoRNP protein","type":"exact"}],"termid":"GO:0005734"}


id: PBO:0052347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 3A","termid":"PBO:0052347"}


id: PBO:0085761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase of the bud neck involved in the septin checkpoint; associates with septin proteins, negatively regulates Swe1p by phosphorylation, shows structural homology to bud neck kinases Gin4p and Hsl1p; KCC4 has a paralog, GIN4, that arose from the whole genome duplication","termid":"PBO:0085761"}


id: MONDO:0022756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 1q deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on thelong arm (q) of chromosome 1. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 1q deletion include developmental delay, intellectual disability, behavioral problems, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0008669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 1","termid":"MONDO:0016866"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1q deletion","secondary_identifiers":["icd11.foundation:296620919","Orphanet:262001","GARD:8669","MEDGEN:1825942","UMLS:C5679674"],"synonyms":[{"name":"1q deletion","type":"related"},{"name":"1q monosomy","type":"related"},{"name":"deletion 1q","type":"related"},{"name":"monosomy 1q","type":"related"},{"name":"partial deletion of chromosome 1q","type":"exact"},{"name":"partial deletion of the long arm of chromosome 1","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 1","type":"exact"},{"name":"partial monosomy 1q","type":"related"},{"name":"partial monosomy of chromosome 1q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 1","type":"exact"}],"termid":"MONDO:0022756","xrefs":{"Monarch":{"xref_id":"0022756"}}}


id: GO:0035962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-13 stimulus.","definition_xrefs":["PMID:20100461","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-13","synonyms":[{"name":"response to IL-13","type":"exact"}],"termid":"GO:0035962"}


id: MONDO:0017753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of peroxisomal alpha-, beta- and omega-oxidation (obsolete MONDO:0017753)","secondary_identifiers":["Orphanet:309810","icd11.foundation:1092479335"],"synonyms":[{"name":"disorder of peroxisomal alpha-, beta- and omega-oxidation","type":"exact"}],"termid":"MONDO:0017753","xrefs":{"Monarch":{"xref_id":"0017753"}}}


id: GO:0141031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host actin cytoskeleton by actin crosslinking the host actin filaments. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:14512630","PMID:22814176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host actin cytoskeleton","termid":"GO:0141027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host actin cytoskeleton via actin crosslinking","synonyms":[{"name":"perturbation by symbiont of host actin cytoskeleton via actin crosslinking","type":"exact"}],"termid":"GO:0141031"}


id: MONDO:1012876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Parkinson disease that occurs in rhesus monkeys due to a mutation in the PINK1 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Parkinson disease, non-human animal","termid":"MONDO:1012984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease, PINK1-related, rhesus monkey","secondary_identifiers":["OMIA:002361-9544"],"termid":"MONDO:1012876","xrefs":{"Monarch":{"xref_id":"1012876"}}}


id: GO:0020027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hemoglobin, including its uptake and utilization.","definition_xrefs":["GOC:go_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemoglobin metabolic process","synonyms":[{"name":"haemoglobin metabolic process","type":"exact"},{"name":"haemoglobin metabolism","type":"exact"},{"name":"hemoglobin metabolism","type":"exact"}],"termid":"GO:0020027"}


id: GO:0010940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency or extent of necrotic cell death. Necrotic cell death is a cell death process that is morphologically characterized by a gain in cell volume (oncosis), swelling of organelles, plasma membrane rupture and subsequent loss of intracellular contents.","definition_xrefs":["PMID:16507998"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of necrotic cell death (obsolete GO:0010940)","termid":"GO:0010940"}


id: PBO:0039803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 1 pseudogene 1","termid":"PBO:0039803"}


id: MONDO:1012390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sensory ataxic neuropathy, non-human animal","termid":"MONDO:1011878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensory ataxic neuropathy, dog","secondary_identifiers":["OMIA:001467-9615"],"termid":"MONDO:1012390","xrefs":{"Monarch":{"xref_id":"1012390"}}}


id: GO:1900356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methanofuran metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of methanofuran metabolic process","termid":"GO:1900354"},{"relation_name":"positively_regulates","term_name":"methanofuran metabolic process","termid":"GO:2001119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of methanofuran metabolic process","synonyms":[{"name":"activation of methanofuran metabolic process","type":"narrow"},{"name":"activation of methanofuran metabolism","type":"exact"},{"name":"positive regulation of methanofuran metabolism","type":"exact"},{"name":"up regulation of methanofuran metabolic process","type":"exact"},{"name":"up regulation of methanofuran metabolism","type":"exact"},{"name":"up-regulation of methanofuran metabolic process","type":"exact"},{"name":"up-regulation of methanofuran metabolism","type":"exact"},{"name":"upregulation of methanofuran metabolic process","type":"exact"},{"name":"upregulation of methanofuran metabolism","type":"exact"}],"termid":"GO:1900356"}


id: GO:0030783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + [cytochrome c]-methionine = S-adenosyl-L-homocysteine + [cytochrome c]-S-methyl-methionine.","definition_xrefs":["EC:2.1.1.123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"[cytochrome c]-methionine S-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.123-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:cytochrome c-methionine S-methyltransferase activity","type":"related"},{"name":"cytochrome c-methionine S-methyltransferase activity","type":"related"}],"termid":"GO:0030783"}


id: GO:0048457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the floral whorl are generated and organized.","definition_xrefs":["GOC:PO_curators","PO:0025023","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"floral whorl development","termid":"GO:0048438"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral whorl morphogenesis","secondary_identifiers":["GO:0048414"],"termid":"GO:0048457"}


id: PBO:0080068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 33","termid":"PBO:0080068"}


id: PBO:0033749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-progressively_decreasing_vegetative_cell_population_growth_rate","termid":"PBO:0033749"}


id: PBO:0047309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fas ligand","termid":"PBO:0047309"}


id: FYPO:0005090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cytokinesis RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Cytokinesis RNAs are transcribed from genes whose products are involved in one or more cytokinetic processes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of cytokinesis gene mRNA during vegetative growth","synonyms":[{"name":"decreased cytokinesis gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of cytokinesis gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of cytokinesis gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of cytokinesis gene transcripts during vegetative growth","type":"exact"},{"name":"reduced level of cytokinesis gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005090"}


id: MONDO:0100021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A childhood-onset epilepsy that is characterized by the presence of visually-induced focal occipital lobe seizures. A proportion of patients with this syndrome have developmental delays and learning difficulty.","direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset self-limited focal epilepsy syndrome","termid":"MONDO:0800502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"photosensitive occipital lobe epilepsy","synonyms":[{"name":"POLE","type":"exact"}],"termid":"MONDO:0100021","xrefs":{"Monarch":{"xref_id":"0100021"}}}


id: PBO:0028696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_silencing_at_telomere","termid":"PBO:0028696"}


id: GO:0005151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Type II interleukin-1 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor binding","termid":"GO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-1, type II receptor binding","synonyms":[{"name":"IL-1 type II","type":"narrow"},{"name":"interleukin-1, type II receptor ligand","type":"narrow"}],"termid":"GO:0005151"}


id: PBO:0061238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP53 antisense RNA 1","termid":"PBO:0061238"}


id: PBO:0049398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametocyte specific factor 1","termid":"PBO:0049398"}


id: PBO:0030921
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_plasmid_loss","termid":"PBO:0030921"}


id: PBO:0052318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1143 pseudogene 2","termid":"PBO:0052318"}


id: GO:0072001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the renal system over time, from its formation to the mature structure. The renal system maintains fluid balance and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products. In humans, the renal system comprises a pair of kidneys, a pair of ureters, urinary bladder, urethra, sphincter muscle and associated blood vessels.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","PMID:6996269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system development","synonyms":[{"name":"urinary system development","type":"broad"},{"name":"urinary tract development","type":"broad"}],"termid":"GO:0072001"}


id: GO:0060024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the generation of rhythmic, synchronous synaptic inputs in a neural circuit.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"rhythmic synaptic transmission","termid":"GO:0060024"}


id: PBO:0039269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDOA pseudogene 2","termid":"PBO:0039269"}


id: GO:0060330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a response to type II interferon (interferon-gamma). Response to interferon gamma is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"regulates","term_name":"response to type II interferon","termid":"GO:0034341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to type II interferon","synonyms":[{"name":"regulation of response to gamma-interferon","type":"related"},{"name":"regulation of response to immune interferon","type":"exact"},{"name":"regulation of response to interferon-gamma","type":"broad"},{"name":"regulation of response to type II IFN","type":"exact"}],"termid":"GO:0060330"}


id: PR:P87041
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-N-acetylglucosamine transporter that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transporter (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1795.03","secondary_identifiers":["UniProtKB:P87041"],"synonyms":[{"name":"Golgi UDP-Gal transporter (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPCC1795.03","type":"related"},{"name":"Spom972h-SLC35A3","type":"exact"}],"termid":"PR:P87041"}


id: PBO:0040660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 5","termid":"PBO:0040660"}


id: GO:1990111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteasome specifically found in mammalian testis. Contains the proteasome activator PA200 in the regulatory particle, and beta1i, beta2i, beta5i and/or alpha4s in the core (20S) subunit. Beta1i, beta2i and beta5i are inducible catalytic subunits, closely related to beta1, beta2 and beta5. Alpha4s is a sperm-specific 20S subunit, but unlike other alternative 20S subunits alpha4s lies in the outer alpha-ring and lacks catalytic activity.","definition_xrefs":["PMID:23706739","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome complex","termid":"GO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"spermatoproteasome complex","termid":"GO:1990111"}


id: PBO:0078777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 3-1","termid":"PBO:0078777"}


id: PBO:0054816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2229","termid":"PBO:0054816"}


id: PBO:0084472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Master regulator that regulates transcript levels of the FLP1 gene; acts in concert with Rep2p to regulate transcript levels of the FLP1 gene that promotes plasmid copy amplification and 2-micron plasmid-inheritance; also autoregulates levels of its own transcript; both Rep1p and Rep2p are sumoylated which is important for function","termid":"PBO:0084472"}


id: PBO:0078561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 49","termid":"PBO:0078561"}


id: PBO:0066508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X5","termid":"PBO:0066508"}


id: GO:0033437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an ACU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0060090","GO:0003723"],"is_obsolete":false,"name":"ACU codon-amino acid adaptor activity","synonyms":[{"name":"ACT codon-amino acid adaptor activity","type":"exact"},{"name":"threonine tRNA","type":"related"}],"termid":"GO:0033437"}


id: MONDO:0017163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemolytic disease due to fetomaternal alloimmunization (obsolete MONDO:0017163)","secondary_identifiers":["Orphanet:275938"],"synonyms":[{"name":"hemolytic disease of the fetus and newborn","type":"exact"}],"termid":"MONDO:0017163","xrefs":{"Monarch":{"xref_id":"0017163"}}}


id: PBO:0027100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rDNA_antisense_small_RNA_level","termid":"PBO:0027100"}


id: PBO:0088766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Rpp40","termid":"PBO:0088766"}


id: PBO:0090355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase","termid":"PBO:0090355"}


id: PBO:0053411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 348","termid":"PBO:0053411"}


id: GO:1904716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chaperone-mediated protein folding.","definition_xrefs":["PMID:24375412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of autophagy","termid":"GO:0010508"},{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"regulation of chaperone-mediated autophagy","termid":"GO:1904714"},{"relation_name":"positively_regulates","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0030163"],"is_obsolete":false,"name":"positive regulation of chaperone-mediated autophagy","synonyms":[{"name":"activation of CMA","type":"related"},{"name":"activation of chaperone-mediated autophagy","type":"narrow"},{"name":"positive regulation of CMA","type":"related"},{"name":"up regulation of CMA","type":"related"},{"name":"up regulation of chaperone-mediated autophagy","type":"exact"},{"name":"up-regulation of CMA","type":"related"},{"name":"up-regulation of chaperone-mediated autophagy","type":"exact"},{"name":"upregulation of CMA","type":"related"},{"name":"upregulation of chaperone-mediated autophagy","type":"exact"}],"termid":"GO:1904716"}


id: MONDO:1011765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"micromelia, non-human animal","secondary_identifiers":["OMIA:000648"],"termid":"MONDO:1011765","xrefs":{"Monarch":{"xref_id":"1011765"}}}


id: MONDO:0700116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brain disorder caused by biallelic variants in NDE1 that is characterized by extreme microcephaly (typically head circumference of more than 10 standard deviations (SD) below the mean), profound motor and intellectual disability, spasticity, and incomplete cerebral formation. Radiologic studies demonstrate overt microcephaly with cortical dysgenesis ranging from simplification to pachygyria/lissencephaly to hydranencephaly. Agenesis of the corpus callosum as well as hypoplasia of the brainstem and cerebellum are typically present.","definition_xrefs":["PMID:22526350","PMID:21529751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly","termid":"MONDO:0001149"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"microcephaly with lissencephaly and/or hydranencephaly","termid":"MONDO:0700116","xrefs":{"Monarch":{"xref_id":"0700116"}}}


id: PBO:0079198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPY like 1","termid":"PBO:0079198"}


id: GO:1903798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microRNA processing.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:BHF_miRNA","GOC:rph","PMID:22269326","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of regulatory ncRNA processing","termid":"GO:0070920"},{"relation_name":"regulates","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of miRNA processing","synonyms":[{"name":"regulation of gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"regulation of miRNA biogenesis","type":"related"},{"name":"regulation of miRNA maturation","type":"narrow"},{"name":"regulation of microRNA biogenesis","type":"related"},{"name":"regulation of microRNA biosynthesis","type":"related"},{"name":"regulation of microRNA biosynthetic process","type":"related"},{"name":"regulation of microRNA metabolic process","type":"related"},{"name":"regulation of microRNA metabolism","type":"related"},{"name":"regulation of microRNA processing","type":"broad"},{"name":"regulation of microRNA-mediated gene silencing, production of microRNAs","type":"exact"}],"termid":"GO:1903798"}


id: PBO:0027319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_electron_transport,_succinate_to_ubiquinone","termid":"PBO:0027319"}


id: GO:0061121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of DIF-2. DIF-2 is a chlorinated alkylphenone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of positive chemotaxis to cAMP by DIF-2","termid":"GO:0061121"}


id: PBO:0063571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"period circadian regulator 1","termid":"PBO:0063571"}


id: PBO:0002833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA elimination defective protein Red1","termid":"PBO:0002833"}


id: _global:singly_occurring_form_of
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"singly_occurring_form_of","synonyms":[{"name":"monadic_form_of","type":"exact"}],"termid":"_global:singly_occurring_form_of"}


id: PBO:0034608
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_cells_with_1C_DNA_content","termid":"PBO:0034608"}


id: MONDO:0004400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type A thymoma which is characterized by an aggressive clinical course (capsular invasion, infiltration of the surrounding tissues) and can metastasize.","definition_xrefs":["NCIT:C7999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymoma type A","termid":"MONDO:0002588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"malignant type A thymoma","secondary_identifiers":["DOID:7927","ICDO:8581/3","MEDGEN:79027","UMLS:C0279707"],"synonyms":[{"name":"malignant type A thymoma","type":"exact"},{"name":"thymoma, medullary, malignant","type":"exact"}],"termid":"MONDO:0004400","xrefs":{"Monarch":{"xref_id":"0004400"}}}


id: PBO:0017773
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha Amylase Homolog","termid":"PBO:0017773"}


id: MONDO:0003497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the renal pelvis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"renal pelvis carcinoma","termid":"MONDO:0005519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"renal pelvis squamous cell carcinoma","secondary_identifiers":["DOID:5534","MEDGEN:66769","NCIT:C7732","UMLS:C0238409"],"synonyms":[{"name":"epidermoid carcinoma of kidney pelvis","type":"exact"},{"name":"epidermoid carcinoma of renal pelvis","type":"exact"},{"name":"epidermoid carcinoma of the kidney pelvis","type":"exact"},{"name":"epidermoid carcinoma of the renal pelvis","type":"exact"},{"name":"kidney pelvis epidermoid carcinoma","type":"exact"},{"name":"kidney pelvis squamous cell carcinoma","type":"exact"},{"name":"kidney renal pelvis squamous cell cancer","type":"exact"},{"name":"renal pelvis epidermoid carcinoma","type":"exact"},{"name":"renal pelvis squamous cell cancer","type":"exact"},{"name":"renal pelvis squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of kidney pelvis","type":"exact"},{"name":"squamous cell carcinoma of renal pelvis","type":"exact"},{"name":"squamous cell carcinoma of the kidney pelvis","type":"exact"},{"name":"squamous cell carcinoma of the renal pelvis","type":"exact"}],"termid":"MONDO:0003497","xrefs":{"Monarch":{"xref_id":"0003497"}}}


id: PBO:0027793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphatase_activity_during_cellular_response_to_phosphate_starvation","termid":"PBO:0027793"}


id: PBO:0088950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atg12 conjugating enzyme Atg10","termid":"PBO:0088950"}


id: PATO:0002457
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's similarity to the appearance of a leaf.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leaf-like","termid":"PATO:0002457"}


id: MONDO:0006945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing or occlusion of the renal artery or arteries. It is due usually to atherosclerosis; fibromuscular dysplasia; thrombosis; embolism, or external pressure. The reduced renal perfusion can lead to renovascular hypertension (hypertension, renovascular).","definition_xrefs":["MESH:D012078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal artery disease","termid":"MONDO:0002286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal artery obstruction","secondary_identifiers":["UMLS:C0035066","DOID:2972","MEDGEN:48406","EFO:1001150"],"termid":"MONDO:0006945","xrefs":{"Monarch":{"xref_id":"0006945"}}}


id: MONDO:0032815
data:
  {"annotated_genes":["SJAG_03773","SJAG_03332"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87324,87325],"is_not":false,"summary":null,"term":"MONDO:0032815"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03332":null,"SJAG_03773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 17","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070448","OMIM:618567","UMLS:C5231412","MEDGEN:1684823"],"synonyms":[{"name":"MITOCHONDRIAL DNA DEPLETION SYNDROME 17","type":"related"},{"name":"MTDPS17","type":"related"}],"termid":"MONDO:0032815","terms_by_termid":{"MONDO:0032815":null},"xrefs":{"Monarch":{"xref_id":"0032815"}}}


id: PBO:0062341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily J member 1","termid":"PBO:0062341"}


id: MONDO:0021452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the cornea.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cornea neoplasm","termid":"MONDO:0021238"},{"relation_name":"is_a","term_name":"benign neoplasm of eye","termid":"MONDO:0021454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"benign neoplasm of cornea","secondary_identifiers":["UMLS:C0154026","MEDGEN:57579","NCIT:C3623","SCTID:92070006","ICD9:224.4","icd11.foundation:568257604"],"synonyms":[{"name":"benign cornea neoplasm","type":"exact"},{"name":"benign cornea tumor","type":"exact"},{"name":"benign cornea tumour","type":"exact"},{"name":"benign corneal neoplasm","type":"exact"},{"name":"benign corneal tumor","type":"exact"},{"name":"benign corneal tumour","type":"exact"},{"name":"benign neoplasm of the cornea","type":"exact"},{"name":"benign tumor of cornea","type":"exact"},{"name":"benign tumor of the cornea","type":"exact"},{"name":"benign tumour of cornea","type":"exact"},{"name":"benign tumour of the cornea","type":"exact"},{"name":"cornea benign neoplasm","type":"exact"}],"termid":"MONDO:0021452","xrefs":{"Monarch":{"xref_id":"0021452"}}}


id: PBO:0041480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 86","termid":"PBO:0041480"}


id: PR:Q9Y7N7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytosolic Fe-S cluster assembly factor NARFL that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04806","PANTHER:PTHR11615:SF31","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic Fe-S cluster assembly factor NAR1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1450.10c","secondary_identifiers":["UniProtKB:Q9Y7N7"],"synonyms":[{"name":"Spom972h-NARFL","type":"exact"},{"name":"nuclear architecture-related protein 1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7N7"}


id: PBO:0090908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi serine carboxypeptidase","termid":"PBO:0090908"}


id: PBO:0084085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor for ADP ribosylation factors (ARFs); involved in vesicular transport between the Golgi and ER, Golgi organization, and actin cytoskeleton organization; GEA2 has a paralog, GEA1, that arose from the whole genome duplication","termid":"PBO:0084085"}


id: MONDO:0008805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Takayasu's arteritis (obsolete MONDO:0008805)","termid":"MONDO:0008805","xrefs":{"Monarch":{"xref_id":"0008805"}}}


id: PBO:0063802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase regulatory subunit alpha 1 pseudogene","termid":"PBO:0063802"}


id: PR:Q10097
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.18c gene.","definition_xrefs":["UniProtKB:Q10097","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C11D3.18C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.18c","synonyms":[{"name":"Spom972h-SPAC11D3.18c","type":"exact"}],"termid":"PR:Q10097"}


id: PBO:0052993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMA4 antisense RNA 1","termid":"PBO:0052993"}


id: GO:0032723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of connective tissue growth factor production","termid":"GO:0032643"},{"relation_name":"positively_regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045422"],"synonyms":[{"name":"activation of connective tissue growth factor production","type":"narrow"},{"name":"positive regulation of CCN2 production","type":"exact"},{"name":"positive regulation of CTGF production","type":"exact"},{"name":"positive regulation of Fisp12 production","type":"exact"},{"name":"positive regulation of Hcs24 production","type":"exact"},{"name":"positive regulation of IGFBP8 production","type":"exact"},{"name":"positive regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"positive regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"},{"name":"stimulation of connective tissue growth factor production","type":"narrow"},{"name":"up regulation of connective tissue growth factor production","type":"exact"},{"name":"up-regulation of connective tissue growth factor production","type":"exact"},{"name":"upregulation of connective tissue growth factor production","type":"exact"}],"termid":"GO:0032723"}


id: MONDO:1011047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrotic syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrotic syndrome, non-human animal","termid":"MONDO:1010261"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrotic syndrome, dog","secondary_identifiers":["OMIA:000712-9615"],"termid":"MONDO:1011047","xrefs":{"Monarch":{"xref_id":"1011047"}}}


id: GO:0008412
data:
  {"annotated_genes":["SJAG_06603"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77636],"is_not":false,"summary":null,"term":"GO:0008412"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + an all-trans-polyprenyl diphosphate = a 4-hydroxy-3-all-trans-polyprenylbenzoate + diphosphate.","definition_xrefs":["RHEA:44504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"4-hydroxybenzoate polyprenyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0000043","EC:2.5.1.39","GO:0048043","MetaCyc:RXN-11368","GO:0048044"],"synonyms":[{"name":"4-HB polyprenyltransferase activity","type":"exact"},{"name":"4-hydroxybenzoate nonaprenyltransferase activity","type":"narrow"},{"name":"PHB polyprenyl diphosphate transferase activity","type":"exact"},{"name":"para-hydroxybenzoate transferase activity","type":"exact"},{"name":"para-hydroxybenzoate-polyprenyl diphosphate transferase activity","type":"exact"},{"name":"para-hydroxybenzoate:polyprenyltransferase activity","type":"exact"}],"termid":"GO:0008412","terms_by_termid":{"GO:0008412":null}}


id: PBO:0042585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar degeneration related 1","termid":"PBO:0042585"}


id: MONDO:0034823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oral-facial-digital syndrome with short stature and brachymesophalangy (obsolete MONDO:0034823)","secondary_identifiers":["GARD:22069"],"termid":"MONDO:0034823","xrefs":{"Monarch":{"xref_id":"0034823"}}}


id: PBO:0000817
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.8.2","termid":"PBO:0000817"}


id: GO:0031281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of a cyclase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cyclase activity","synonyms":[{"name":"activation of cyclase activity","type":"narrow"},{"name":"stimulation of cyclase activity","type":"narrow"},{"name":"up regulation of cyclase activity","type":"exact"},{"name":"up-regulation of cyclase activity","type":"exact"},{"name":"upregulation of cyclase activity","type":"exact"}],"termid":"GO:0031281"}


id: FYPO:0002999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to medial cortex during vegetative growth","termid":"FYPO:0002558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to medial cortical node","synonyms":[{"name":"normal protein localisation to medial cortical node","type":"exact"},{"name":"normal protein localization to cortical medial dot","type":"exact"},{"name":"normal protein localization to cytokinetic nodes","type":"related"},{"name":"normal protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"normal protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"normal protein localization to medial cortical nodes","type":"exact"},{"name":"normal protein recruitment to medial cortical node","type":"related"}],"termid":"FYPO:0002999"}


id: PBO:0036296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin coat adaptor Irc6","termid":"PBO:0036296"}


id: GO:0004218
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Similar to cathepsin L, but with much less activity on the terminal bond of Z-Phe-Arg-NHMec, and more activity on the terminal bond of Z-Val-Val-Arg-Xaa compounds.","definition_xrefs":["EC:3.4.22.27"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin S activity (obsolete GO:0004218)","synonyms":[{"name":"cathepsin S activity","type":"exact"}],"termid":"GO:0004218"}


id: MONDO:0019166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete strongyloidiasis (obsolete MONDO:0019166)","termid":"MONDO:0019166","xrefs":{"Monarch":{"xref_id":"0019166"}}}


id: MONDO:0859574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"annular epidermolytic ichthyosis","termid":"MONDO:0011870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"ichthyosis, annular epidermolytic, 2","secondary_identifiers":["OMIM:620148","UMLS:C5774264","MEDGEN:1824037"],"termid":"MONDO:0859574","xrefs":{"Monarch":{"xref_id":"0859574"}}}


id: PBO:0085536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S6, no bacterial homolog; phosphorylated on S233 by Ypk3p in a TORC1-dependent manner, and on S232 in a TORC1/2-dependent manner by Ypk1/2/3p; RPS6B has a paralog, RPS6A, that arose from the whole genome duplication","termid":"PBO:0085536"}


id: PBO:0051480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (V)-66 (pseudogene)","termid":"PBO:0051480"}


id: PBO:0070861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 14","termid":"PBO:0070861"}


id: _global:has_end_location
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x 'has end location' y if and only if there exists some process z such that x 'ends with' z and z 'occurs in' y","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"_global:has_part_that_occurs_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_end_location","secondary_identifiers":["RO:0002232"],"termid":"_global:has_end_location"}


id: SO:1001283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon signal for a UAA stop codon redefinition.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stop_codon_signal","termid":"SO:1001288"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UAA_stop_codon_signal","synonyms":[{"name":"UAA stop codon signal","type":"exact"}],"termid":"SO:1001283"}


id: PR:000005216
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the human CDC5L gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 5-like protein","synonyms":[{"name":"CDC5L","type":"exact"},{"name":"KIAA0432","type":"related"},{"name":"PCDC5RP","type":"related"},{"name":"cdc5-like protein","type":"exact"},{"name":"pombe cdc5-related protein","type":"exact"}],"termid":"PR:000005216"}


id: PR:Q09174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gma12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.04c","synonyms":[{"name":"Spom972h-gma12","type":"exact"}],"termid":"PR:Q09174"}


id: GO:0003293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an endocardial cushion cell give rise to a cell that is part of a heart valve.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"part_of","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart valve cell differentiation","termid":"GO:0003293"}


id: PBO:0058781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7150","termid":"PBO:0058781"}


id: PBO:0063455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE11A antisense RNA 1","termid":"PBO:0063455"}


id: GO:0060652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structures of the mammary gland cord are generated and organized. Mammary gland cords form when the mammary gland bud invades the mammary fat.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"mammary gland duct morphogenesis","termid":"GO:0060603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland cord morphogenesis","synonyms":[{"name":"mammary gland sprout morphogenesis","type":"exact"}],"termid":"GO:0060652"}


id: GO:0086024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An adrenergic receptor signaling pathway that contributes to an increase in frequency or rate of heart contraction. Binding of adrenalin or noradrenalin to a beta-adrenergic receptor on the surface of the signal-receiving cell results in the activation of an intracellular Gs protein. Gs activates adenylate cyclase to increase intracellular cyclic-AMP (cAMP) levels. cAMP binds directly to F-channels to allow an inward flow of sodium (known as funny current, or If current). The funny current is responsible for membrane depolarization and an increase in heart rate.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:bf","PMID:21099118","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete adenylate cyclase-activating adrenergic receptor signaling pathway involved in positive regulation of heart rate (obsolete GO:0086024)","synonyms":[{"name":"Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"broad"},{"name":"adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"broad"},{"name":"beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"}],"termid":"GO:0086024"}


id: PBO:0069744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1025, pseudogene","termid":"PBO:0069744"}


id: PBO:0055997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM1 homolog, mRNA degradation associated","termid":"PBO:0055997"}


id: MONDO:0005745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with nematodes of the order enoplida.","definition_xrefs":["MESH:D017189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Nematoda infectious disease","termid":"MONDO:0005871"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enoplea infectious disease","synonyms":[{"name":"Enoplea caused disease or disorder","type":"exact"},{"name":"Enoplea disease or disorder","type":"exact"}],"termid":"MONDO:0005745","xrefs":{"Monarch":{"xref_id":"0005745"}}}


id: MONDO:1010416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myoclonus that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus, non-human animal","termid":"MONDO:1010002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus, horse","secondary_identifiers":["OMIA:000689-9796"],"termid":"MONDO:1010416","xrefs":{"Monarch":{"xref_id":"1010416"}}}


id: GO:0047538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-carboxy-D-arabinitol 1-phosphate + H2O = 2-carboxy-D-arabinitol + phosphate.","definition_xrefs":["EC:3.1.3.63","RHEA:17837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-carboxy-D-arabinitol-1-phosphatase activity","secondary_identifiers":["KEGG_REACTION:R04167","MetaCyc:2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RXN"],"synonyms":[{"name":"2-carboxy-D-arabinitol 1-phosphate phosphohydrolase activity","type":"related"},{"name":"2-carboxy-D-arabinitol-1-phosphate 1-phosphohydrolase activity","type":"related"},{"name":"2-carboxyarabinitol 1-phosphatase activity","type":"related"}],"termid":"GO:0047538"}


id: PBO:0071775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 3","termid":"PBO:0071775"}


id: PBO:0045959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGFR antisense RNA 1","termid":"PBO:0045959"}


id: PBO:0017002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM186 ortholog","termid":"PBO:0017002"}


id: GO:0140525
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pole of the kinetoplast associated with kinetoplast DNA replication. The antipodal sites flank the kinetoplast DNA disk and are positioned approximately 180 degrees apart. In Trypanosoma brucei and Crithidia fasciculata, minicircles are attached at antipodal sites and they contain enzymes that catalyse some of the later reactions in minicircle replication.","definition_xrefs":["PMID:8045928","PMID:12455998","PMID:17462016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinetoplast","termid":"GO:0020023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"antipodal site","synonyms":[{"name":"antipodal zone","type":"exact"}],"termid":"GO:0140525"}


id: GO:0008263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of mismatched pyrimidine bases in DNA. Enzymes with this activity recognize and remove pyrimidines present in mismatches by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apyrimidinic (AP) site.","definition_xrefs":["GOC:elh","PMID:9224623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch base pair DNA N-glycosylase activity","termid":"GO:0000700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787","GO:0140097"],"is_obsolete":false,"name":"pyrimidine-specific mismatch base pair DNA N-glycosylase activity","synonyms":[{"name":"G/T-mismatch-specific thymine-DNA glycosylase activity","type":"exact"}],"termid":"GO:0008263"}


id: PBO:0052187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily M alpha 1","termid":"PBO:0052187"}


id: GO:0048091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in females.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"is_a","term_name":"regulation of female pigmentation","termid":"GO:0048089"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"female pigmentation","termid":"GO:0048095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of female pigmentation","synonyms":[{"name":"activation of female pigmentation","type":"narrow"},{"name":"stimulation of female pigmentation","type":"narrow"},{"name":"up regulation of female pigmentation","type":"exact"},{"name":"up-regulation of female pigmentation","type":"exact"},{"name":"upregulation of female pigmentation","type":"exact"}],"termid":"GO:0048091"}


id: PBO:0033783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-reversed_RTS1_barrier_polarity","termid":"PBO:0033783"}


id: PBO:0003500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylamidoimidazolesuccinocarboxamide synthase, SAICAR synthetase, Ade7","termid":"PBO:0003500"}


id: PBO:0068585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 36, pseudogene","termid":"PBO:0068585"}


id: PBO:0002123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CorA family magnesium ion transporter","termid":"PBO:0002123"}


id: GO:0120303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism changes its pigmentation (lightening in response to a brighter environment or darkening in response to a dimmer environment) in response to a change in light intensity detected by melanopsin-expressing eye cells.","definition_xrefs":["GOC:cvs","PMID:32898924","PMID:29239123","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"background adaptation","termid":"GO:0120302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visually-mediated background adaptation","termid":"GO:0120303"}


id: GO:0042686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into a cardioblast. A cardioblast is a cardiac precursor cell. It is a cell that has been committed to a cardiac fate, but will undergo more cell division rather than terminally differentiating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardioblast differentiation","termid":"GO:0051890"},{"relation_name":"is_a","term_name":"regulation of cardiac cell fate specification","termid":"GO:2000043"},{"relation_name":"regulates","term_name":"cardioblast cell fate specification","termid":"GO:0042685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardioblast cell fate specification","termid":"GO:0042686"}


id: MONDO:0010421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked agammaglobulinemia (XLA) is a clinically variable form of isolated agammaglobulinemia, an inherited immunodeficiency disorder, and is characterized in affected males by recurrent bacterial infections during infancy.","definition_xrefs":["Orphanet:47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated agammaglobulinemia","termid":"MONDO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"Bruton-type agammaglobulinemia","secondary_identifiers":["MESH:C537409","MEDGEN:65123","NCIT:C3822","OMIM:300755","SCTID:65880007","MedDRA:10060360","NANDO:1200343","NANDO:2200716","UMLS:C0221026","DOID:14179","GARD:1033"],"synonyms":[{"name":"BTK deficiency","type":"exact"},{"name":"BTK-deficiency","type":"exact"},{"name":"Bruton agammaglobulinemia tyrosine kinase deficiency","type":"exact"},{"name":"Bruton type agammaglobulinemia","type":"exact"},{"name":"Bruton's Sex-linked agammaglobulinemia","type":"exact"},{"name":"Bruton's X-linked agammaglobulinemia","type":"exact"},{"name":"Bruton's agammaglobulinaemia","type":"exact"},{"name":"Bruton's agammaglobulinemia","type":"related"},{"name":"Bruton's type agammaglobulinemia","type":"exact"},{"name":"Bruton-type agammaglobulinemia","type":"exact"},{"name":"X-linked agammaglobulinemia","type":"exact"},{"name":"XLA","type":"related"},{"name":"agammaglobulinemia, BTK","type":"related"},{"name":"agammaglobulinemia, Bruton tyrosine kinase","type":"related"},{"name":"agammaglobulinemia, X-linked","type":"related"},{"name":"agammaglobulinemia, X-linked 1, X-linked recessive","type":"exact"},{"name":"agammaglobulinemia, X-linked, type 1","type":"related"},{"name":"hypogammaglobulinemia, X-linked","type":"related"},{"name":"immunodeficiency 1","type":"related"}],"termid":"MONDO:0010421","xrefs":{"Monarch":{"xref_id":"0010421"}}}


id: PBO:0077498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 217","termid":"PBO:0077498"}


id: MONDO:0032755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without variable brain abnormalities; NEDBA","secondary_identifiers":["MEDGEN:1675664","UMLS:C5193102","OMIM:618443"],"synonyms":[{"name":"NEDBA","type":"related"},{"name":"NEURODEVELOPMENTAL DISORDER WITH OR WITHOUT VARIABLE BRAIN ABNORMALITIES","type":"related"}],"termid":"MONDO:0032755","xrefs":{"Monarch":{"xref_id":"0032755"}}}


id: PBO:0069458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 723, pseudogene","termid":"PBO:0069458"}


id: PBO:0004971
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactokinase deficiency with cataracts","termid":"PBO:0004971"}


id: PBO:0025531
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl phosphate synthetase I deficiency","termid":"PBO:0025531"}


id: FYPO:0002474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the region of a chromosome at which a DNA double-strand break has occurred is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to double-strand break site","termid":"FYPO:0002473"},{"relation_name":"is_a","term_name":"decreased protein localization to chromosome during vegetative growth","termid":"FYPO:0002839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to double-strand break site","synonyms":[{"name":"decreased protein localisation to double-strand break site","type":"exact"},{"name":"decreased protein localization to DSB site","type":"exact"},{"name":"decreased protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"decreased protein localization to site of double-strand break","type":"exact"},{"name":"reduced protein localization to double-strand break site","type":"exact"}],"termid":"FYPO:0002474"}


id: GO:0140951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl27-[histone H3] + 3 S-adenosyl-L-methionine = 3 H+ + N6,N6,N6-trimethyl-L-lysyl27-[histone H3] + 3 S-adenosyl-L-homocysteine. This reaction is the successive addition of three methyl groups to the unmethylated lysine residue at position 27 of histone H3, producing histone H3K27me3.","definition_xrefs":["RHEA:60292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K27 methyltransferase activity","termid":"GO:0046976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0008276","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"histone H3K27 trimethyltransferase activity","synonyms":[{"name":"histone H3-K27 trimethylase activity","type":"exact"},{"name":"histone H3-K27 trimethylation","type":"broad"},{"name":"histone H3K27 mono/di/trimethylase activity","type":"exact"},{"name":"histone H3K27 trimethylase activity","type":"exact"},{"name":"histone H3K27 trimethylation","type":"broad"},{"name":"histone lysine N-trimethyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0140951"}


id: PBO:0058860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8089","termid":"PBO:0058860"}


id: PR:O94525
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC609.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ribonuclease C609.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC609.01","synonyms":[{"name":"Spom972h-SPBC609.01","type":"exact"}],"termid":"PR:O94525"}


id: MONDO:0023167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focal alopecia congenital megalencephaly","termid":"MONDO:0023167","xrefs":{"Monarch":{"xref_id":"0023167"}}}


id: MONDO:1010475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent truncus arteriosus that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"persistent truncus arteriosus, non-human animal","termid":"MONDO:1010018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent truncus arteriosus, cattle","secondary_identifiers":["OMIA:000795-9913"],"termid":"MONDO:1010475","xrefs":{"Monarch":{"xref_id":"1010475"}}}


id: PBO:0039600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member B pseudogene 1","termid":"PBO:0039600"}


id: PBO:0040915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 19","termid":"PBO:0040915"}


id: PBO:0047231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member C","termid":"PBO:0047231"}


id: FYPO:0007657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is decreased at one or more meiotic recombination hotspots.","definition_xrefs":["PomBase:mah","PMID:23395004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to linear element","termid":"FYPO:0006164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to linear element at meiotic recombination hotspot","synonyms":[{"name":"decreased linear element chromatin binding at meiotic DNA double-strand break hotspots","type":"exact"},{"name":"decreased protein localisation to linear element at meiotic recombination hotspot","type":"exact"},{"name":"reduced protein localization to linear element at meiotic recombination hotspot","type":"exact"}],"termid":"FYPO:0007657"}


id: MONDO:0009451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital T-cell immunodeficiency","termid":"MONDO:0001222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Nezelof syndrome","secondary_identifiers":["MESH:C536288","ICD9:279.13","DOID:2012","SCTID:55602000","icd11.foundation:215376282","GARD:7201","MEDGEN:101814","Orphanet:83471","UMLS:C0152094","OMIM:242700"],"synonyms":[{"name":"Nezelof syndrome","type":"exact"},{"name":"Nezelof's syndrome","type":"exact"},{"name":"T-lymphocyte deficiency","type":"exact"},{"name":"immune defect due to absence Of Thymus","type":"related"},{"name":"immune defect due to absence of THYMUS","type":"related"},{"name":"thymic aplasia","type":"related"}],"termid":"MONDO:0009451","xrefs":{"Monarch":{"xref_id":"0009451"}}}


id: PBO:0025425
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xeroderma pigementosum","termid":"PBO:0025425"}


id: PBO:0003809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIH complex cyclin Mcs2","termid":"PBO:0003809"}


id: GO:0039593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus interferes with the host cell completing the M phase of the cell cycle.","definition_xrefs":["VZ:877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cell cycle progression","termid":"GO:0044071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host exit from mitosis","synonyms":[{"name":"inhibition of host mitotic exit by virus","type":"exact"},{"name":"perturbation by virus of host exit from mitosis","type":"narrow"},{"name":"suppression by virus of host exit from mitosis","type":"related"}],"termid":"GO:0039593"}


id: PBO:0043965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin lambda 1","termid":"PBO:0043965"}


id: PBO:0048020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferric chelate reductase 1 like","termid":"PBO:0048020"}


id: PBO:0004243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP3/PP2B/calcineurin subfamily","termid":"PBO:0004243"}


id: PBO:0077143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction protein 3","termid":"PBO:0077143"}


id: MONDO:0033561
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deeah syndrome","secondary_identifiers":["OMIM:619004","MEDGEN:1756624","UMLS:C5436579"],"synonyms":[{"name":"DEEAH","type":"related"},{"name":"DEEAH SYNDROME","type":"related"},{"name":"Developmental Delay With Endocrine, Exocrine, Autonomic, and Hematologic Abnormalities","type":"related"}],"termid":"MONDO:0033561","xrefs":{"Monarch":{"xref_id":"0033561"}}}


id: GO:0001547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of antral follicles due to cell proliferation and/or growth of the antral cavity.","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antral ovarian follicle growth","termid":"GO:0001547"}


id: MONDO:0016107
data:
  {"annotated_genes":["SJAG_02043"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011266"}]},"cv_name":"mondo","definition":"An inherited progressive disorder affecting the muscles. It is characterized by muscle wasting and hypotonia, cataracts, heart conduction defects and endocrinopathies.","definition_xrefs":["NCIT:C84914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"},{"relation_name":"is_a","term_name":"myotonic syndrome","termid":"MONDO:0016120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02043":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myotonic dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:192087511","MEDGEN:10239","ICD9:359.2","MESH:D009223","Orphanet:206647","SCTID:240104008","OMIMPS:160900","GARD:10419","UMLS:C0027126","DOID:450","MedDRA:10068871","NANDO:1200495","NANDO:2200864"],"synonyms":[{"name":"inherited myotonic dystrophy","type":"exact"},{"name":"myotonia atrophica","type":"related"},{"name":"myotonia dystrophica","type":"related"},{"name":"myotonic disease","type":"related"}],"termid":"MONDO:0016107","terms_by_termid":{"MONDO:0011266":null},"xrefs":{"Monarch":{"xref_id":"0016107"}}}


id: PATO:0001190
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering in a bearer by virtue the bearer's being not fully grown or developed.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile","termid":"PATO:0001190"}


id: GO:0031427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methotrexate stimulus. Methotrexate is 4-amino-10-methylformic acid, a folic acid analogue that is a potent competitive inhibitor of dihydrofolate reductase.","definition_xrefs":["GOC:ef","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to methotrexate","termid":"GO:0031427"}


id: GO:0050383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uracil + acceptor = barbiturate + reduced acceptor.","definition_xrefs":["RHEA:22752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"uracil dehydrogenase activity","secondary_identifiers":["MetaCyc:URACIL-DEHYDROGENASE-RXN"],"termid":"GO:0050383"}


id: MONDO:0019355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory multisystem disorder characterized clinically by fever of unknown origin, arthralgia or arthritis, hyperleucocytosis, and typical skin rash.","definition_xrefs":["Orphanet:829"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult-onset Still disease","secondary_identifiers":["MedDRA:10058493","UMLS:C0085253","ICD9:714.2","SCTID:68190001","DOID:14256","SCTID:239920006","NORD:737","MESH:D016706","ICD9:759.89","icd11.foundation:549009522","MEDGEN:39007","GARD:436","MedDRA:10064056","MESH:D014924","NANDO:1200282","EFO:0007135"],"synonyms":[{"name":"AOSD","type":"exact"},{"name":"Adult-Onset Still's Disease","type":"exact"},{"name":"Still's disease adult onset","type":"related"},{"name":"Wissler-Fanconi syndrome","type":"exact"},{"name":"adult Still's disease","type":"related"},{"name":"adult onset Still's disease","type":"exact"},{"name":"adult-onset Still disease","type":"exact"},{"name":"adult-onset Still's disease","type":"exact"}],"termid":"MONDO:0019355","xrefs":{"Monarch":{"xref_id":"0019355"}}}


id: GO:0030945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The catalysis of phosphate removal from a phosphotyrosine using cysteine as a nucleophile and proceed by means of a thiol-phosphate intermediate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete protein tyrosine phosphatase activity, via thiol-phosphate intermediate (obsolete GO:0030945)","termid":"GO:0030945"}


id: PBO:0057488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 606","termid":"PBO:0057488"}


id: PBO:0004617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM-like protein linking chromatin modification to RNAi, Stc1","termid":"PBO:0004617"}


id: SO:0001329
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_2prime_O_dimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_2_prime_O_dimethylguanosine","secondary_identifiers":["RNAMOD:034"],"synonyms":[{"name":"N2 2 prime O dimethylguanosine","type":"exact"},{"name":"N2,2'-O-dimethylguanosine","type":"exact"},{"name":"m2Gm","type":"exact"}],"termid":"SO:0001329"}


id: PBO:0030398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_nitrogen_starvation","termid":"PBO:0030398"}


id: GO:0010936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of macrophage cytokine production. Macrophage cytokine production is the appearance of a chemokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of macrophage cytokine production","termid":"GO:0010935"},{"relation_name":"negatively_regulates","term_name":"macrophage cytokine production","termid":"GO:0010934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage cytokine production","termid":"GO:0010936"}


id: GO:0003117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reductions in the diameter of blood vessels as a result of secretion of norepinephrine into the bloodstream.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction by norepinephrine","termid":"GO:0003116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasoconstriction by circulating norepinephrine","synonyms":[{"name":"regulation of vasoconstriction by circulating noradrenaline","type":"exact"}],"termid":"GO:0003117"}


id: PR:Q9UTS6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dlc1 gene.","definition_xrefs":["UniProtKB:Q9UTS6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.08","synonyms":[{"name":"Spom972h-dlc1","type":"exact"},{"name":"TCTEX-1 protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTS6"}


id: GO:0051455
data:
  {"annotated_genes":["SJAG_00418","SJAG_01805","SJAG_03217","SJAG_01837","SJAG_03926","SJAG_04076","SJAG_01224","SJAG_02814","SJAG_03989","SJAG_00918","SJAG_05220","SJAG_01775","SJAG_02346","SJAG_03327","SJAG_05266","SJAG_01211","SJAG_01371","SJAG_01278","SJAG_03220","SJAG_03437","SJAG_05319","SJAG_03683","SJAG_02731","SJAG_00794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89467,90073,91310,94140,95648,95894,98236,98958,100863,101679,102778,105833,107870,108187,109256,109513,110264,110688,110731,113614,114483,116314,117306],"is_not":false,"summary":null,"term":"GO:0051455"},{"annotations":[117071],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904967"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis I. During meiosis I sister kinetochores are lying next to each other facing the same spindle pole and monopolar attachment of the chromatid to the spindle occurs.","definition_xrefs":["GOC:ai","GOC:clt","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of meiotic spindle microtubules to kinetochore","termid":"GO:0051316"},{"relation_name":"part_of","term_name":"meiotic metaphase I homologous chromosome alignment","termid":"GO:0043060"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"spindle attachment to meiosis I kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of spindle microtubules to kinetochore during meiosis I","type":"related"},{"name":"attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation","type":"exact"},{"name":"attachment of spindle microtubules to kinetochore involved in meiosis I","type":"exact"},{"name":"monopolar attachment","type":"related"},{"name":"sister kinetochore mono-orientation","type":"related"}],"termid":"GO:0051455","terms_by_termid":{"GO:0051455":null,"GO:1904967":null}}


id: MONDO:1010315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Periodontitis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"mouth disorder, non-human animal","termid":"MONDO:1011333"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodontitis, non-human animal","secondary_identifiers":["OMIA:002056"],"termid":"MONDO:1010315","xrefs":{"Monarch":{"xref_id":"1010315"}}}


id: PBO:0033813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human SMARCD1, SMARCD2 and SMARCD3 ortholog","termid":"PBO:0033813"}


id: PBO:0075280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 20","termid":"PBO:0075280"}


id: GO:0034112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of homotypic cell-cell adhesion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of homotypic cell-cell adhesion","termid":"GO:0034110"},{"relation_name":"positively_regulates","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of homotypic cell-cell adhesion","termid":"GO:0034112"}


id: GO:0015090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Fe2+(out) = Fe2+(in). In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["TC:9.A.9.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferric iron transmembrane transporter activity","termid":"GO:0015091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"low-affinity ferric iron ion transmembrane transporter activity","synonyms":[{"name":"low affinity iron ion transmembrane transporter activity","type":"exact"},{"name":"low affinity iron transporter activity","type":"exact"}],"termid":"GO:0015090"}


id: GO:0016420
data:
  {"annotated_genes":["SJAG_04107","SJAG_03972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59949,70496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004314"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a malonyl (HOOC-CH2-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03972":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"malonyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"termid":"GO:0016420","terms_by_termid":{"GO:0004314":null}}


id: PBO:0044112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis associated transcript 75","termid":"PBO:0044112"}


id: GO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An actin-rich adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell, contain an F-actin-rich core surrounded by a ring structure containing proteins such as vinculin and talin, and have a diameter of 0.5 mm.","definition_xrefs":["PMID:15890982","PMID:12837608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"podosome","secondary_identifiers":["Wikipedia:Podosome"],"termid":"GO:0002102"}


id: PR:Q10159
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenine DNA glycosylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01390","PANTHER:PTHR10359:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine DNA glycosylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.02","secondary_identifiers":["UniProtKB:Q10159"],"synonyms":[{"name":"Spom972h-MUTYH","type":"exact"}],"termid":"PR:Q10159"}


id: PBO:0040285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit beta 1","termid":"PBO:0040285"}


id: MONDO:0015694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma (disease) that involves the mucosa.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant melanoma of the mucosa","secondary_identifiers":["MEDGEN:1676191","Orphanet:168999","UMLS:C5191057","GARD:20110"],"synonyms":[{"name":"melanoma (disease) of mucosa","type":"exact"},{"name":"mucosa melanoma","type":"exact"},{"name":"mucosa melanoma (disease)","type":"exact"}],"termid":"MONDO:0015694","xrefs":{"Monarch":{"xref_id":"0015694"}}}


id: PBO:0042523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2 associated protein 2 pseudogene 1","termid":"PBO:0042523"}


id: PBO:0091385
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAs-Like","termid":"PBO:0091385"}


id: PBO:0086367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative alternate subunit of succinate dehydrogenase (SDH); mitochondrial inner membrane protein; genetic interaction with SDH4 suggests that Shh4p can function as a functional SDH subunit; a fraction copurifies with SDH subunit Sdh3p; expression induced by nitrogen limitation in a GLN3, GAT1-dependent manner; Shh4p has greater similarity to human SDHD (subunit D of SDH, implicated in paraganglioma) than does its paralog Sdh4p","termid":"PBO:0086367"}


id: GO:0106027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a prolongation or process extending from a neuron, e.g. an axon, or a dendrite.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:11585923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection organization","termid":"GO:0106027"}


id: GO:0050226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + galactosylsphingosine = adenosine 3',5'-bisphosphate + psychosine sulfate.","definition_xrefs":["EC:2.8.2.13","MetaCyc:PSYCHOSINE-SULFOTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"psychosine sulfotransferase activity","secondary_identifiers":["RHEA:14137"],"synonyms":[{"name":"3'-phosphoadenosine 5'-phosphosulfate-psychosine sulphotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:galactosylsphingosine sulfotransferase activity","type":"related"},{"name":"PAPS:psychosine sulphotransferase activity","type":"related"},{"name":"psychosine sulphotransferase activity","type":"exact"}],"termid":"GO:0050226"}


id: PBO:0005697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex associated protein","termid":"PBO:0005697"}


id: MONDO:0002711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete angiolipoma (obsolete MONDO:0002711)","termid":"MONDO:0002711","xrefs":{"Monarch":{"xref_id":"0002711"}}}


id: PBO:0047090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 138 member B","termid":"PBO:0047090"}


id: GO:0075286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sporangiospore formation, a process in which sporangiospores, a type of asexual spore found in fungi, are formed. Sporangiospores are formed within sac-like structure, the sporangium, following the division of the cytoplasm.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043943"},{"relation_name":"regulates","term_name":"sporangiospore formation","termid":"GO:0034300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sporangiospore formation","termid":"GO:0075286"}


id: GO:1990014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Square array of closely spaced intramembrane particles, 4-6 nm in size, that form supramolecular aggregates found in the plasma membrane of astrocytes, skeletal muscle and epithelial cells. They have been shown to contain aquaporins (water channels).","definition_xrefs":["NIF_Subcellular:sao1747012216","PMID:22718347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"orthogonal array","synonyms":[{"name":"OAP","type":"related"},{"name":"orthogonal array of particles","type":"exact"},{"name":"square array","type":"related"}],"termid":"GO:1990014"}


id: PBO:0048070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 21","termid":"PBO:0048070"}


id: MONDO:0019818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mitral malformation","termid":"MONDO:0016582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft mitral valve","secondary_identifiers":["Orphanet:95465","UMLS:C0344772","MEDGEN:473080","GARD:19267"],"termid":"MONDO:0019818","xrefs":{"Monarch":{"xref_id":"0019818"}}}


id: GO:0050863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"regulates","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell activation","synonyms":[{"name":"regulation of T lymphocyte activation","type":"exact"},{"name":"regulation of T-cell activation","type":"exact"},{"name":"regulation of T-lymphocyte activation","type":"exact"}],"termid":"GO:0050863"}


id: PR:O43006
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug178 gene.","definition_xrefs":["UniProtKB:O43006","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 178 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.07c","synonyms":[{"name":"Spom972h-mug178","type":"exact"}],"termid":"PR:O43006"}


id: PBO:0065285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich transmembrane protein 1","termid":"PBO:0065285"}


id: GO:1903948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of atrial cardiac muscle cell action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:nc","GOC:TermGenie","PMID:25281747","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of action potential","termid":"GO:0045759"},{"relation_name":"is_a","term_name":"regulation of atrial cardiac muscle cell action potential","termid":"GO:0098910"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle cell contraction","termid":"GO:0106135"},{"relation_name":"negatively_regulates","term_name":"atrial cardiac muscle cell action potential","termid":"GO:0086014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of atrial cardiac muscle cell action potential","synonyms":[{"name":"down regulation of atrial cardiac muscle cell action potential","type":"exact"},{"name":"down-regulation of atrial cardiac muscle cell action potential","type":"exact"},{"name":"downregulation of atrial cardiac muscle cell action potential","type":"exact"},{"name":"inhibition of atrial cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:1903948"}


id: PATO:0001096
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001096 absolute force value (obsolete PATO:0001096)","termid":"PATO:0001096"}


id: PBO:0057295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 512-2","termid":"PBO:0057295"}


id: GO:0044314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 27 of the ubiquitin monomers, is added to a protein.","definition_xrefs":["PMID:19345326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein K27-linked ubiquitination","synonyms":[{"name":"protein K27-linked polyubiquitination","type":"exact"}],"termid":"GO:0044314"}


id: GO:2000770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment or maintenance of cell polarity regulating cell shape.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000769"},{"relation_name":"negatively_regulates","term_name":"establishment or maintenance of cell polarity regulating cell shape","termid":"GO:0071963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment or maintenance of cell polarity regulating cell shape","termid":"GO:2000770"}


id: MONDO:0005666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete berylliosis (obsolete MONDO:0005666)","termid":"MONDO:0005666","xrefs":{"Monarch":{"xref_id":"0005666"}}}


id: GO:0035439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranylgeranyl diphosphate = halima-5(6),13-dien-15-yl diphosphate.","definition_xrefs":["EC:5.5.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0009975","GO:0016853"],"is_obsolete":false,"name":"halimadienyl-diphosphate synthase activity","secondary_identifiers":["RHEA:25621"],"synonyms":[{"name":"halima-5(6),13-dien-15-yl-diphosphate lyase (cyclizing)","type":"related"},{"name":"halimadienyl diphosphate synthase activity","type":"related"}],"termid":"GO:0035439"}


id: PBO:0062312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily V member 1","termid":"PBO:0062312"}


id: PBO:0011079
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae ABD1","termid":"PBO:0011079"}


id: SO:0002117
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0002117 <new term> (obsolete SO:0002117)","termid":"SO:0002117"}


id: PBO:0002860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridylate synthase Cbf5 (predicted)","termid":"PBO:0002860"}


id: GO:0016701
data:
  {"annotated_genes":["SJAG_03225","SJAG_00309","SJAG_00519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010308"},{"annotations":[71663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010309"},{"annotations":[90158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102672"},{"annotations":[67219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016702"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from one donor, and molecular oxygen is incorporated into a donor.","definition_xrefs":["EC:1.13.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_00519":null,"SJAG_03225":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-9027628","Reactome:R-HSA-9027633","Reactome:R-HSA-9027607","Reactome:R-HSA-9020251","Reactome:R-HSA-9020259","Reactome:R-HSA-9020261","Reactome:R-HSA-9020264","Reactome:R-HSA-9026405","Reactome:R-HSA-9018858","Reactome:R-HSA-9018859","Reactome:R-HSA-2161951","Reactome:R-HSA-9018863","Reactome:R-HSA-9020278","Reactome:R-HSA-9027532","Reactome:R-HSA-9020277","Reactome:R-HSA-9027624","Reactome:R-HSA-9018894","Reactome:R-HSA-9028255","Reactome:R-HSA-9027627","Reactome:R-HSA-9020255","Reactome:R-HSA-9020256","Reactome:R-HSA-9024997","Reactome:R-HSA-9025995","Reactome:R-HSA-9025996","Reactome:R-HSA-9025999","Reactome:R-HSA-9020282","Reactome:R-HSA-9026005"],"synonyms":[{"name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, miscellaneous","type":"narrow"},{"name":"oxygenase","type":"broad"}],"termid":"GO:0016701","terms_by_termid":{"GO:0010308":null,"GO:0010309":null,"GO:0016702":null,"GO:0102672":null}}


id: MONDO:0014366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the ZMYND15 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 14","secondary_identifiers":["GARD:16020","OMIM:615842","DOID:0070179","MEDGEN:862891","UMLS:C4014454"],"synonyms":[{"name":"SPGF14","type":"related"},{"name":"ZMYND15 azoospermia","type":"exact"},{"name":"azoospermia caused by mutation in ZMYND15","type":"exact"},{"name":"spermatogenic failure 14","type":"exact"},{"name":"spermatogenic failure type 14","type":"exact"}],"termid":"MONDO:0014366","xrefs":{"Monarch":{"xref_id":"0014366"}}}


id: GO:0102105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: feruloylacetyl-CoA + 4-coumaryl-CoA + H2O = demethoxycurcumin + 2 coenzyme A + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete demethoxycurcumin synthase activity from feruloylacetyl-CoA (obsolete GO:0102105)","termid":"GO:0102105"}


id: PBO:0003883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-ATPase subunit H (predicted)","termid":"PBO:0003883"}


id: PR:O14277
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01525","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S5-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.08","secondary_identifiers":["UniProtKB:O14277"],"synonyms":[{"name":"Spom972h-RPS5","type":"exact"}],"termid":"PR:O14277"}


id: PBO:0028005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_mitotic_sister_chromatid_segregation,_with_phi-shaped_DNA_mass","termid":"PBO:0028005"}


id: PBO:0084928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein expressed during iron starvation; binds to a sequence element in the 3'-untranslated regions of specific mRNAs to mediate their degradation; involved in iron homeostasis; protein increases in abundance and relative distribution to the nucleus increases upon DNA replication stress; TIS11 has a paralog, CTH1, that arose from the whole genome duplication","termid":"PBO:0084928"}


id: GO:0008349
data:
  {"annotated_genes":["SJAG_03384"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101240],"is_not":false,"summary":null,"term":"GO:0008349"}]},"cv_name":"molecular_function","definition":"Catalysis of the phosphorylation of serine and threonine residues in a mitogen-activated protein kinase kinase kinase (MAPKKK), resulting in activation of MAPKKK. MAPKKK signaling pathways relay, amplify and integrate signals from the plasma membrane to the nucleus in response to a diverse range of extracellular stimuli.","definition_xrefs":["PMID:11790549","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016301","GO:0016740","GO:0004672","GO:0003674"],"is_obsolete":false,"name":"MAP kinase kinase kinase kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-936991","Reactome:R-HSA-9645442","Reactome:R-HSA-177692"],"synonyms":[{"name":"MAP4K activity","type":"exact"},{"name":"MAPKKKK","type":"exact"}],"termid":"GO:0008349","terms_by_termid":{"GO:0008349":null}}


id: GO:2001190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"is_a","term_name":"regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:2001188"},{"relation_name":"positively_regulates","term_name":"T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","termid":"GO:0002291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","synonyms":[{"name":"positive regulation of T lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"positive regulation of T-cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"positive regulation of T-lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"}],"termid":"GO:2001190"}


id: PBO:0066146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 2","termid":"PBO:0066146"}


id: PBO:0065775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quinolinate phosphoribosyltransferase","termid":"PBO:0065775"}


id: MONDO:0017005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Y chromosome number anomaly (obsolete MONDO:0017005)","secondary_identifiers":["icd11.foundation:1632180154","Orphanet:263746"],"termid":"MONDO:0017005","xrefs":{"Monarch":{"xref_id":"0017005"}}}


id: MONDO:0100238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of Fanconi renotubular syndrome that is inherited.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi renotubular syndrome","termid":"MONDO:0001083"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"inherited Fanconi renotubular syndrome","secondary_identifiers":["OMIMPS:134600"],"synonyms":[{"name":"hereditary Fanconi renotubular syndrome","type":"exact"}],"termid":"MONDO:0100238","xrefs":{"Monarch":{"xref_id":"0100238"}}}


id: GO:1905226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of adhesion of symbiont to host epithelial cell.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15659068"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of adhesion of symbiont to host epithelial cell (obsolete GO:1905226)","termid":"GO:1905226"}


id: GO:0061170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of hair follicle placode formation, the developmental process in which a hair placode forms. An hair follicle placode is a thickening of the ectoderm that will give rise to the hair follicle bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hair follicle development","termid":"GO:0051799"},{"relation_name":"is_a","term_name":"regulation of hair follicle placode formation","termid":"GO:0061168"},{"relation_name":"negatively_regulates","term_name":"hair follicle placode formation","termid":"GO:0060789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hair follicle placode formation","termid":"GO:0061170"}


id: MONDO:0017666
data:
  {"annotated_genes":["SJAG_02488","SJAG_03158","SJAG_00104","SJAG_02698","SJAG_01878","SJAG_04565","SJAG_01938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033014"},{"annotations":[86350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014131"},{"annotations":[86065,86064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009440"},{"annotations":[87063,87065,87064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008416"}]},"cv_name":"mondo","definition":"Palmoplantar keratoderma that diffusely involves most of the palm and sole and is caused by a genetic abnormality.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary palmoplantar keratoderma","termid":"MONDO:0019272"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02488":null,"SJAG_02698":null,"SJAG_03158":null,"SJAG_04565":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"diffuse palmoplantar keratoderma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1259583500","Orphanet:307141","GARD:21289","UMLS:C0022584","HP:0007435","ICD9:757.39","MEDGEN:7201","SCTID:400123002"],"synonyms":[{"name":"diffuse PPK","type":"exact"},{"name":"diffuse keratosis palmoplantaris","type":"exact"},{"name":"diffuse palmoplantar hyperkeratosis","type":"exact"}],"termid":"MONDO:0017666","terms_by_termid":{"MONDO:0008416":null,"MONDO:0009440":null,"MONDO:0014131":null,"MONDO:0033014":null},"xrefs":{"Monarch":{"xref_id":"0017666"}}}


id: MONDO:0971001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 121 with autoinflammation","secondary_identifiers":["UMLS:C5935616","MEDGEN:1857174","OMIM:620807"],"termid":"MONDO:0971001","xrefs":{"Monarch":{"xref_id":"0971001"}}}


id: GO:0044508
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with glucagon-like peptide 1 and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["GOC:jl","PMID:12529935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"glucagon-like peptide 1 receptor activity","termid":"GO:0044508"}


id: PR:O59731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized J domain-containing protein C3E7.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.11c","synonyms":[{"name":"Spom972h-SPBC3E7.11c","type":"exact"}],"termid":"PR:O59731"}


id: PBO:0108691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGEF Spo7","termid":"PBO:0108691"}


id: MONDO:0019125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, clinically heterogeneous, multisystemic inflammatory disease characterized by inflammation of the cartilage and proteoglycan rich structures leading to cartilage damage with joint, ocular and cardiovascular involvement.","definition_xrefs":["Orphanet:728"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"chondromalacia","termid":"MONDO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relapsing polychondritis","secondary_identifiers":["NORD:1655","NCIT:C157268","MedDRA:10038304","MEDGEN:45995","NANDO:2200428","SCTID:72275000","MESH:D011081","GARD:7417","ICD10CM:M94.1","NANDO:1200283","DOID:2556","EFO:1001148","icd11.foundation:1412888287","ICD9:733.99","NANDO:2100154","UMLS:C0032453"],"synonyms":[{"name":"chondromalacia, systemic","type":"exact"},{"name":"chronic atrophic polychondritis","type":"related"},{"name":"recurrent polychondritis","type":"related"}],"termid":"MONDO:0019125","xrefs":{"Monarch":{"xref_id":"0019125"}}}


id: FYPO:0002476
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, cell shape is altered, and cell size remains normal, and in which vacuoles are more visible (usually by microscopy) than normal.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"vacuolated","termid":"FYPO:0001581"},{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"viable vegetative cell, abnormal cell shape, normal cell size","termid":"FYPO:0001510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000257","FYPO:0000004"],"is_obsolete":false,"name":"viable vacuolated vegetative cell, abnormal cell shape, normal cell size","synonyms":[{"name":"viable vacuolated vegetative cell with abnormal cell shape and normal cell size","type":"related"},{"name":"viable vacuolated vegetative cell, abnormal cell shape, normal cell length","type":"narrow"},{"name":"viable vacuolated vegetative cell, abnormal cell shape, normal cell size during mitotic cell cycle","type":"related"},{"name":"viable vegetative misshapen vacuolated cell","type":"related"},{"name":"viable, vacuolated, abnormal cell shape, normal cell size during vegetative growth","type":"exact"}],"termid":"FYPO:0002476"}


id: PBO:0044285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 49","termid":"PBO:0044285"}


id: GO:2001028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell chemotaxis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endothelial cell migration","termid":"GO:0010595"},{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"regulation of endothelial cell chemotaxis","termid":"GO:2001026"},{"relation_name":"positively_regulates","term_name":"endothelial cell chemotaxis","termid":"GO:0035767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell chemotaxis","termid":"GO:2001028"}


id: PR:O94433
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC660.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C660.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.17c","synonyms":[{"name":"Spom972h-SPBC660.17c","type":"exact"}],"termid":"PR:O94433"}


id: GO:0031879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 somatostatin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatostatin receptor binding","termid":"GO:0031877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 2 somatostatin receptor binding","synonyms":[{"name":"type 2 somatostatin receptor ligand","type":"narrow"}],"termid":"GO:0031879"}


id: MONDO:0021179
data:
  {"annotated_genes":["SJAG_04300","SJAG_02274","SJAG_01236"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0971004"},{"annotations":[85543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010080"},{"annotations":[86454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014889"}]},"cv_name":"mondo","definition":"Disorders caused by imbalances in the protein homeostasis network - synthesis, folding, and transport of proteins; post-translational modifications; and degradation or clearance of misfolded proteins.","definition_xrefs":["MESH:D057165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01236":null,"SJAG_02274":null,"SJAG_04300":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"proteostasis deficiencies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:403490","UMLS:C2718000"],"synonyms":[{"name":"Misfolding disease, Protein","type":"narrow"},{"name":"Misfolding diseases, Protein","type":"narrow"},{"name":"Misfolding disorder, Protein","type":"narrow"},{"name":"Misfolding disorders, Protein","type":"narrow"},{"name":"Protein Misfolding disease","type":"narrow"},{"name":"Protein Misfolding diseases","type":"narrow"},{"name":"Protein Misfolding disorder","type":"narrow"},{"name":"Protein Misfolding disorders","type":"narrow"},{"name":"Protein folding disease","type":"narrow"},{"name":"Protein folding diseases","type":"narrow"},{"name":"Protein folding disorder","type":"narrow"},{"name":"Protein folding disorders","type":"narrow"},{"name":"Proteostasis deficiency","type":"exact"},{"name":"Proteostasis dysfunction","type":"exact"},{"name":"Proteostasis dysfunctions","type":"exact"},{"name":"deficiencies, Proteostasis","type":"exact"},{"name":"deficiency, Proteostasis","type":"exact"},{"name":"disease, Protein Misfolding","type":"narrow"},{"name":"disease, Protein folding","type":"narrow"},{"name":"diseases, Protein Misfolding","type":"narrow"},{"name":"diseases, Protein folding","type":"narrow"},{"name":"disorder, Protein Misfolding","type":"narrow"},{"name":"disorder, Protein folding","type":"narrow"},{"name":"disorders, Protein Misfolding","type":"narrow"},{"name":"disorders, Protein folding","type":"narrow"},{"name":"dysfunction, Proteostasis","type":"exact"},{"name":"dysfunctions, Proteostasis","type":"exact"},{"name":"folding disease, Protein","type":"narrow"},{"name":"folding diseases, Protein","type":"narrow"},{"name":"folding disorder, Protein","type":"narrow"},{"name":"folding disorders, Protein","type":"narrow"},{"name":"proteinopathy","type":"related"},{"name":"proteopathic disease","type":"related"},{"name":"proteopathy","type":"related"}],"termid":"MONDO:0021179","terms_by_termid":{"MONDO:0010080":null,"MONDO:0014889":null,"MONDO:0971004":null},"xrefs":{"Monarch":{"xref_id":"0021179"}}}


id: PBO:0030378
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_tert-butyl_hydroperoxide","termid":"PBO:0030378"}


id: PBO:0082706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; forms a subcomplex with Mic10p and Mic27p whose assembly and stability requires cardiolipin","termid":"PBO:0082706"}


id: PBO:0043653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 8 pseudogene 3","termid":"PBO:0043653"}


id: PBO:0036218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_threonine_phosphorylation_at_Thr-Pro_site_during_vegetative_growth","termid":"PBO:0036218"}


id: PBO:0017897
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EIF3E","termid":"PBO:0017897"}


id: MOD:01860
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine bacillithiol disulfide.","definition_xrefs":["PubMed:19578333","ChEBI:61338","RESID:AA0563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine bacillithiol disulfide","synonyms":[{"name":"(2S)-(2-[S-(L-cystein-S-yl)-L-cysteinyl]amino-2-deoxy-alpha-D-glucopyranosyloxy)-butanedioic acid","type":"exact"},{"name":"BSH","type":"exact"},{"name":"L-cysteine bacillithiol disulfide","type":"exact"},{"name":"MOD_RES S-bacillithiol cysteine disulfide","type":"exact"}],"termid":"MOD:01860"}


id: PBO:0018152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA endoribonuclease involved in mRNP quality control Swt1 (predicted)","termid":"PBO:0018152"}


id: GO:0016083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Fusion of the synaptic vesicle with the postsynaptic membrane.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle fusion (obsolete GO:0016083)","synonyms":[{"name":"synaptic vesicle fusion","type":"exact"}],"termid":"GO:0016083"}


id: PBO:0053624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 667","termid":"PBO:0053624"}


id: PBO:0077432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 167B","termid":"PBO:0077432"}


id: PBO:0050240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 18","termid":"PBO:0050240"}


id: PBO:0016057
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human C9orf64","termid":"PBO:0016057"}


id: PBO:0084428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major stress-induced structural GPI-cell wall glycoprotein; associates with translating ribosomes, possible role in mitochondrial genome maintenance; ORF contains two distinct variable minisatellites; SED1 has a paralog, SPI1, that arose from the whole genome duplication","termid":"PBO:0084428"}


id: MONDO:0013819
data:
  {"annotated_genes":["SJAG_02254"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86614],"is_not":false,"summary":null,"term":"MONDO:0013819"}]},"cv_name":"mondo","definition":"Any Coffin-Siris syndrome in which the cause of the disease is a mutation in the ARID1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"},{"relation_name":"is_a","term_name":"BAFopathy","termid":"MONDO:0700120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02254":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:766161","DOID:0070044","OMIM:614607","GARD:15820","UMLS:C3553247"],"synonyms":[{"name":"ARID1A Coffin-Siris syndrome","type":"exact"},{"name":"ARID1A-related BAFopathy","type":"exact"},{"name":"COFFIN-SIRIS syndrome 2","type":"related"},{"name":"CSS2","type":"exact"},{"name":"Coffin-Siris syndrome 2","type":"related"},{"name":"Coffin-Siris syndrome caused by mutation in ARID1A","type":"exact"},{"name":"MRD14","type":"exact"},{"name":"autosomal dominant intellectual disability 14","type":"exact"},{"name":"autosomal dominant mental retardation 14","type":"exact"},{"name":"intellectual disability, autosomal dominant 14","type":"exact"},{"name":"intellectual disability, autosomal dominant type 14","type":"exact"},{"name":"mental retardation, autosomal dominant 14","type":"related"},{"name":"mental retardation, autosomal dominant type 14","type":"exact"}],"termid":"MONDO:0013819","terms_by_termid":{"MONDO:0013819":null},"xrefs":{"Monarch":{"xref_id":"0013819"}}}


id: GO:0006529
data:
  {"annotated_genes":["SJAG_02832","SJAG_04549"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111167,102500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine metabolic process","termid":"GO:0006528"},{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02832":null,"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"asparagine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"asparagine anabolism","type":"exact"},{"name":"asparagine biosynthesis","type":"exact"},{"name":"asparagine formation","type":"exact"},{"name":"asparagine synthesis","type":"exact"}],"termid":"GO:0006529","terms_by_termid":{"GO:0070981":null}}


id: PBO:0031050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_modification_during_vegetative_growth","termid":"PBO:0031050"}


id: PBO:0003827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Rix7 (predicted)","termid":"PBO:0003827"}


id: GO:0170011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecule that recognizes stalled ribosomes and initiates a signaling response.","definition_xrefs":["PMID:32610081","PMID:32289254","PMID:36638793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140299","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"stalled ribosome sensor activity","termid":"GO:0170011"}


id: PBO:0057002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 95","termid":"PBO:0057002"}


id: GO:0060328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based movement by which cytoplasmic actin filaments slide past one another resulting in a contraction that propels the cell in the direction that has been defined as the front of the cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic actin-based contraction involved in cell motility","termid":"GO:0060327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic actin-based contraction involved in forward cell motility","synonyms":[{"name":"cytoplasmic actin-based contraction involved in forward cell locomotion","type":"related"}],"termid":"GO:0060328"}


id: PBO:0005237
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distinct from protein kinase C pathway and osmosensing MAP-kinase pathway","termid":"PBO:0005237"}


id: PBO:0074062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 39","termid":"PBO:0074062"}


id: PR:Q10068
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H1.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3H1.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.02c","synonyms":[{"name":"Spom972h-SPAC3H1.02c","type":"exact"}],"termid":"PR:Q10068"}


id: PBO:0068590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 41, pseudogene","termid":"PBO:0068590"}


id: PBO:0042409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 20 pseudogene 1","termid":"PBO:0042409"}


id: PBO:0059431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A2","termid":"PBO:0059431"}


id: FYPO:0001939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquinol-cytochrome-c reductase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"},{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"},{"relation_name":"is_a","term_name":"abnormal proton transport","termid":"FYPO:0005971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002114","FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0005447"],"is_obsolete":false,"name":"abnormal ubiquinol-cytochrome-c reductase activity","termid":"FYPO:0001939"}


id: MONDO:0011851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"headache disorder","termid":"MONDO:0021146"},{"relation_name":"is_a","term_name":"migraine with or without aura, susceptibility to","termid":"MONDO:0100246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with or without aura, susceptibility to, 6","secondary_identifiers":["UMLS:C1843765","MEDGEN:334829","MESH:C564385","OMIM:607516"],"synonyms":[{"name":"MGR6","type":"related"},{"name":"migraine with or without aura, susceptibility to, 6","type":"exact"},{"name":"migraine with or without aura, susceptibility to, type 6","type":"exact"},{"name":"migraine, familial hemiplegic, 4","type":"related"}],"termid":"MONDO:0011851","xrefs":{"Monarch":{"xref_id":"0011851"}}}


id: MONDO:0010790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare mitochondrial oxidative phosphorylation disorder characterized by myoclonic seizures, ataxia, generalized epilepsy, muscle weakness and ragged red fibers in the muscle biopsy.","definition_xrefs":["Orphanet:551"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"early myoclonic encephalopathy","termid":"MONDO:0016022"},{"relation_name":"excluded_subClassOf","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"},{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"mitochondrial encephalomyopathy","termid":"MONDO:0004675"},{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002320","MONDO:0005027","MONDO:0005336","MONDO:0004069"],"is_obsolete":false,"name":"MERRF syndrome","secondary_identifiers":["ICD10CM:E88.42","OMIM:545000","MEDGEN:56486","SCTID:68448003","NCIT:C84889","ICD9:277.87","UMLS:C0162672","NANDO:1200177","GARD:7144","MedDRA:10069825","MESH:D017243","NANDO:2200526","DOID:310"],"synonyms":[{"name":"Fukuhara syndrome","type":"exact"},{"name":"MERRF","type":"exact"},{"name":"MERRF syndrome","type":"exact"},{"name":"myoclonic epilepsy - ragged red fibers","type":"exact"},{"name":"myoclonic epilepsy - ragged red fibres","type":"exact"},{"name":"myoclonic epilepsy associated with ragged red fibers","type":"related"},{"name":"myoclonic epilepsy associated with ragged red fibres","type":"related"},{"name":"myoclonic epilepsy associated with ragged-RED fibers","type":"related"},{"name":"myoclonic epilepsy associated with ragged-RED fibres","type":"related"},{"name":"myoclonic epilepsy with ragged red fibers","type":"related"},{"name":"myoclonic epilepsy with ragged red fibres","type":"related"},{"name":"myoclonus epilepsy and ragged red fibers","type":"exact"},{"name":"myoclonus epilepsy and ragged red fibres","type":"exact"},{"name":"myoclonus epilepsy associated with ragged-red fibers","type":"exact"},{"name":"myoclonus epilepsy associated with ragged-red fibres","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibers","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibers (MERRF syndrome)","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibres","type":"exact"},{"name":"myoclonus with epilepsy and with ragged Red fibres (MERRF syndrome)","type":"exact"},{"name":"myoencephalopathy ragged-red fiber disease","type":"related"},{"name":"myoencephalopathy ragged-red fibre disease","type":"related"}],"termid":"MONDO:0010790","xrefs":{"Monarch":{"xref_id":"0010790"}}}


id: GO:0030563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Activity that provides specificity to a methylase by using base complementarity to guide site-specific 2'-O-ribose methylations to a small nuclear RNA molecule.","definition_xrefs":["PMID:11733745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 2'-O-ribose methylation guide activity","termid":"GO:0030561"},{"relation_name":"is_a","term_name":"snRNA modification guide activity","termid":"GO:0030566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"snRNA 2'-O-ribose methylation guide activity","termid":"GO:0030563"}


id: MONDO:0013052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the KLHL7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 42","secondary_identifiers":["OMIM:612943","UMLS:C2751986","DOID:0110386","ICD10CM:H35.5","GARD:15593","MEDGEN:442864","MESH:C567854"],"synonyms":[{"name":"KLHL7 retinitis pigmentosa","type":"exact"},{"name":"RP42","type":"exact"},{"name":"retinitis pigmentosa 42","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in KLHL7","type":"exact"},{"name":"retinitis pigmentosa type 42","type":"exact"}],"termid":"MONDO:0013052","xrefs":{"Monarch":{"xref_id":"0013052"}}}


id: MONDO:0006699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Presence or formation of gallstones in the common bile duct.","definition_xrefs":["MESH:D042883"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"excluded_subClassOf","term_name":"gallbladder disorder","termid":"MONDO:0005281"},{"relation_name":"is_a","term_name":"common bile duct disorder","termid":"MONDO:0002886"},{"relation_name":"is_a","term_name":"gallstones","termid":"MONDO:0005346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"choledocholithiasis","secondary_identifiers":["MedDRA:10049891","DOID:11755","UMLS:C0701818","MEDGEN:148784","EFO:1000865"],"termid":"MONDO:0006699","xrefs":{"Monarch":{"xref_id":"0006699"}}}


id: GO:0061411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to cold (obsolete GO:0061411)","termid":"GO:0061411"}


id: FYPO:0003820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer mitochondria than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"mitochondria present in decreased numbers during vegetative growth","synonyms":[{"name":"decreased number of mitochondria during vegetative growth","type":"exact"},{"name":"fewer mitochondria during vegetative growth","type":"exact"},{"name":"mitochondria present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"mitochondria present in reduced numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0003820"}


id: PBO:0040757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B double prime 1 pseudogene","termid":"PBO:0040757"}


id: GO:0098935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules in dendrites.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axo-dendritic transport","termid":"GO:0008088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"dendritic transport","synonyms":[{"name":"dendrite cargo transport","type":"exact"}],"termid":"GO:0098935"}


id: FYPO:0004893
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is normal (i.e. indistinguishable from wild type) during the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:11069657","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal 1,3-beta-D-glucan synthase activity","termid":"FYPO:0002157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal 1,3-beta-D-glucan synthase activity during vegetative growth","synonyms":[{"name":"normal 1,3-beta-D-glucan synthase activity during vegetative growth during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004893"}


id: FYPO:0003495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of azetidine-2-carboxylic acid acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal azetidine-2-carboxylic acid acetyltransferase activity","termid":"FYPO:0003495"}


id: GO:0051059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to NF-kappaB, a transcription factor for eukaryotic RNA polymerase II promoters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"NF-kappaB binding","termid":"GO:0051059"}


id: PBO:0060867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIMA related kinase 10","termid":"PBO:0060867"}


id: PBO:0083089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA binding protein with possible chromatin-reorganizing activity; involved in transcriptional activation, gene silencing, and DNA replication and repair","termid":"PBO:0083089"}


id: PBO:0079216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase like domain containing 1","termid":"PBO:0079216"}


id: PBO:0060772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B6","termid":"PBO:0060772"}


id: GO:0141030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host actin cytoskeleton by depolymerizing the host filamentous actin. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:28800062","PMID:11889090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host actin cytoskeleton","termid":"GO:0141027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host actin cytoskeleton via filamentous actin depolymerization","termid":"GO:0141030"}


id: MONDO:0016904
data:
  {"annotated_genes":["SJAG_03424","SJAG_01548"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86054,86055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007925"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 5","termid":"MONDO:0016870"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01548":null,"SJAG_03424":null},"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20825","icd11.foundation:285885131","Orphanet:262038"],"synonyms":[{"name":"partial deletion of chromosome 5q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 5","type":"exact"},{"name":"partial monosomy of chromosome 5q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 5","type":"exact"}],"termid":"MONDO:0016904","terms_by_termid":{"MONDO:0007925":null},"xrefs":{"Monarch":{"xref_id":"0016904"}}}


id: GO:0035189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex containing a heterodimeric E2F transcription factor and a Retinoblastoma (Rb) family member. This complex is capable of repressing transcription of E2F-regulated genes in order to regulate cell cycle progression.","definition_xrefs":["PMID:14616073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"Rb-E2F complex","synonyms":[{"name":"retinoblastoma-E2F complex","type":"exact"}],"termid":"GO:0035189"}


id: MONDO:0030906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Trichomonas tenax.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichomoniasis","termid":"MONDO:0002154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trichomonas tenax infectious disease","secondary_identifiers":["DOID:0050270"],"synonyms":[{"name":"Trichomonas tenax caused disease or disorder","type":"exact"},{"name":"Trichomonas tenax disease or disorder","type":"exact"},{"name":"Trichomonas tenax trichomoniasis","type":"related"}],"termid":"MONDO:0030906","xrefs":{"Monarch":{"xref_id":"0030906"}}}


id: PBO:0079266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 38","termid":"PBO:0079266"}


id: GO:0051879
data:
  {"annotated_genes":["SJAG_03717","SJAG_01914","SJAG_03784","SJAG_00750","SJAG_03955","SJAG_00112"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74389,75251,76881,77035,78129,80112],"is_not":false,"summary":null,"term":"GO:0051879"}]},"cv_name":"molecular_function","definition":"Binding to Hsp90 proteins, any of a group of heat shock proteins around 90kDa in size.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat shock protein binding","termid":"GO:0031072"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00750":null,"SJAG_01914":null,"SJAG_03717":null,"SJAG_03784":null,"SJAG_03955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"Hsp90 protein binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Hsp90 binding","type":"exact"},{"name":"Hsp90 class protein binding","type":"exact"}],"termid":"GO:0051879","terms_by_termid":{"GO:0051879":null}}


id: PBO:0034609
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination_with_elongated_germ_tube_and_fragmented_nucleus","termid":"PBO:0034609"}


id: PBO:0004762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg3","termid":"PBO:0004762"}


id: MONDO:1010693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, sheep","secondary_identifiers":["OMIA:000038-9940"],"termid":"MONDO:1010693","xrefs":{"Monarch":{"xref_id":"1010693"}}}


id: PR:Q9P5N2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aat1 gene.","definition_xrefs":["UniProtKB:Q9P5N2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC359.03c","synonyms":[{"name":"Spom972h-aat1","type":"exact"}],"termid":"PR:Q9P5N2"}


id: MONDO:0016628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemorrhagic disorder due to a coagulation factors defect (obsolete MONDO:0016628)","secondary_identifiers":["Orphanet:248315"],"synonyms":[{"name":"rare bleeding disorder due to a coagulation factors defect","type":"narrow"},{"name":"rare coagulopathy due to a coagulation factor defect","type":"narrow"}],"termid":"MONDO:0016628","xrefs":{"Monarch":{"xref_id":"0016628"}}}


id: PBO:0068711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 92, pseudogene","termid":"PBO:0068711"}


id: PBO:0043336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLN5 intracellular trafficking protein","termid":"PBO:0043336"}


id: GO:0007545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sex determination processes that take place after the initial transmission of the sexual phenotype to specific information pathways.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"processes downstream of sex determination signal","termid":"GO:0007545"}


id: GO:0043423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 3-phosphoinositide-dependent protein kinase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"3-phosphoinositide-dependent protein kinase binding","synonyms":[{"name":"phosphatidylinositol-3-phosphate-dependent protein kinase binding","type":"exact"}],"termid":"GO:0043423"}


id: PBO:0053274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor B1","termid":"PBO:0053274"}


id: GO:0140698
data:
  {"annotated_genes":["SJAG_01745","SJAG_03449","SJAG_02698"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89398,91668,94936],"is_not":false,"summary":null,"term":"GO:0140698"}]},"cv_name":"biological_process","definition":"The process in which physical connections are formed between sub-telomeric heterochromatin and the nuclear envelope facilitating bouquet formation.","definition_xrefs":["PMID:31635174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_02698":null,"SJAG_03449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"attachment of telomeric heterochromatin to nuclear envelope","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of telomeres to nuclear envelope","type":"broad"},{"name":"attachment of telomeric chromatin to nuclear envelope","type":"broad"},{"name":"heterochromatin organization","type":"broad"}],"termid":"GO:0140698","terms_by_termid":{"GO:0140698":null}}


id: PR:O13760
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A2.10c gene.","definition_xrefs":["UniProtKB:O13760","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C17A2.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.10c","synonyms":[{"name":"Spom972h-SPAC17A2.10c","type":"exact"}],"termid":"PR:O13760"}


id: GO:0008674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-phospho-2-dehydro-3-deoxy-D-galactonate = D-glyceraldehyde 3-phosphate + pyruvate.","definition_xrefs":["RHEA:24464","EC:4.1.2.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity","secondary_identifiers":["KEGG_REACTION:R01064","MetaCyc:DEHYDDEOXPHOSGALACT-ALDOL-RXN"],"synonyms":[{"name":"(KDPGal)aldolase activity","type":"related"},{"name":"2-dehydro-3-deoxy-D-galactonate-6-phosphate D-glyceraldehyde-3-phosphate-lyase (pyruvate-forming)","type":"related"},{"name":"2-dehydro-3-deoxy-D-galactonate-6-phosphate D-glyceraldehyde-3-phosphate-lyase activity","type":"related"},{"name":"2-dehydro-3-deoxyphosphogalactonate aldolase activity","type":"exact"},{"name":"2-keto-3-deoxy-6-phosphogalactonic acid aldolase activity","type":"related"},{"name":"2-keto-3-deoxy-6-phosphogalactonic aldolase activity","type":"related"},{"name":"2-oxo-3-deoxygalactonate 6-phosphate aldolase activity","type":"related"},{"name":"6-phospho-2-dehydro-3-deoxygalactonate aldolase activity","type":"related"},{"name":"6-phospho-2-keto-3-deoxygalactonate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxygalactonate aldolase activity","type":"related"},{"name":"phospho-2-keto-3-deoxygalactonic aldolase activity","type":"related"}],"termid":"GO:0008674"}


id: GO:1900541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumonisin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"fumonisin metabolic process","termid":"GO:1900539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fumonisin biosynthetic process","synonyms":[{"name":"fumonisin anabolism","type":"exact"},{"name":"fumonisin biosynthesis","type":"exact"},{"name":"fumonisin formation","type":"exact"},{"name":"fumonisin synthesis","type":"exact"}],"termid":"GO:1900541"}


id: GO:0033120
data:
  {"annotated_genes":["SJAG_02018","SJAG_01040","SJAG_02058","SJAG_01919","SJAG_03279","SJAG_00996"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89800,118814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[75691,111303,92490,74435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of RNA splicing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"regulation of RNA splicing","termid":"GO:0043484"},{"relation_name":"positively_regulates","term_name":"RNA splicing","termid":"GO:0008380"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00996":null,"SJAG_01040":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null,"SJAG_03279":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of RNA splicing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033120","terms_by_termid":{"GO:0048026":null,"GO:1905746":null}}


id: GO:0102868
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 24-epi-campesterol + NADPH + H+ + O2 = brassicasterol + NADP + 2 H2O.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 24-epi-campsterol desaturase activity (obsolete GO:0102868)","termid":"GO:0102868"}


id: GO:1900374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in positive regulation of mating type switching.","definition_xrefs":["GOC:go_curators","GOC:TermGenie","PMID:8804308"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mating type switching by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900374)","synonyms":[{"name":"activation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"stimulation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of mating type switching by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900374"}


id: GO:0070231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a T cell, a type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.","definition_xrefs":["CL:0000084","GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte apoptotic process","termid":"GO:0070227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell apoptotic process","synonyms":[{"name":"T cell apoptosis","type":"narrow"},{"name":"T lymphocyte apoptosis","type":"exact"},{"name":"T-cell apoptosis","type":"exact"},{"name":"T-lymphocyte apoptosis","type":"exact"},{"name":"programmed cell death of T cells by apoptosis","type":"exact"}],"termid":"GO:0070231"}


id: GO:0034785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicylate + O2 + NAD(P)H + H+ = gentisate + H2O + NAD(P)+.","definition_xrefs":["UM-BBD_reactionID:r1034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"salicylate 5-hydroxylase activity","secondary_identifiers":["EC:1.14.13.172","MetaCyc:RXN-10446","RHEA:35307"],"termid":"GO:0034785"}


id: MONDO:0054838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial hypertrophic 27","secondary_identifiers":["OMIM:618052","UMLS:C4748014","MEDGEN:1648325"],"synonyms":[{"name":"CMH27","type":"related"},{"name":"cardiomyopathy, FAMILIAL hypertrophic 27","type":"related"}],"termid":"MONDO:0054838","xrefs":{"Monarch":{"xref_id":"0054838"}}}


id: PBO:0088488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal amidase Nta1","termid":"PBO:0088488"}


id: GO:0009700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of indole phytoalexins, any indole compound produced by plants as part of their defense response.","definition_xrefs":["GOC:sm","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"indole phytoalexin metabolic process","termid":"GO:0046217"},{"relation_name":"is_a","term_name":"phytoalexin biosynthetic process","termid":"GO:0052315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"indole phytoalexin biosynthetic process","synonyms":[{"name":"indole phytoalexin anabolism","type":"exact"},{"name":"indole phytoalexin biosynthesis","type":"exact"},{"name":"indole phytoalexin formation","type":"exact"},{"name":"indole phytoalexin synthesis","type":"exact"}],"termid":"GO:0009700"}


id: MONDO:0006593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic process characterized by a diffuse poorly circumscribed overgrowth of adipose tissue in the pelvic region. Clinical presentation includes complaints of back and abdominal pain, urinary frequency, perineal pain and constipation. It predominately affects black males.","definition_xrefs":["NCIT:C27486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipomatosis","termid":"MONDO:0006574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelvic lipomatosis","secondary_identifiers":["MEDGEN:96064","MESH:C535549","UMLS:C0406608","EFO:1000748","DOID:3927"],"synonyms":[{"name":"Excess of mature unencapsulated fatty tissue in the pelvis","type":"related"},{"name":"pelvic lipomatosis","type":"exact"},{"name":"pelvic lipomatosis (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006593","xrefs":{"Monarch":{"xref_id":"0006593"}}}


id: PBO:0057213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378c","termid":"PBO:0057213"}


id: PBO:0082271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP deaminase; tetrameric enzyme that catalyzes the deamination of AMP to form IMP and ammonia; thought to be involved in regulation of intracellular purine (adenine, guanine, and inosine) nucleotide pools","termid":"PBO:0082271"}


id: PBO:0047211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 221 member B","termid":"PBO:0047211"}


id: MONDO:0016589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progressive cerebello-cerebral atrophy (obsolete MONDO:0016589)","secondary_identifiers":["Orphanet:247198"],"synonyms":[{"name":"PCCA","type":"exact"}],"termid":"MONDO:0016589","xrefs":{"Monarch":{"xref_id":"0016589"}}}


id: PBO:0082816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved fungal protein with similarity to zinc carboxypeptidases; in some strains required for normal cell wall assembly","termid":"PBO:0082816"}


id: MONDO:0021205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that involves the ear.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of ear","secondary_identifiers":["MEDGEN:3946","NCIT:C26757","ICD9:388.8","SCTID:25906001","ICD9:388.9","UMLS:C0013447"],"synonyms":[{"name":"Ear disease","type":"exact"},{"name":"Ear disorder","type":"exact"},{"name":"disease of ear","type":"exact"},{"name":"disease or disorder of ear","type":"exact"},{"name":"disorder of ear","type":"exact"},{"name":"ear disease","type":"exact"},{"name":"ear disease or disorder","type":"exact"}],"termid":"MONDO:0021205","xrefs":{"Monarch":{"xref_id":"0021205"}}}


id: PR:P21535
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit a that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05079","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.07","secondary_identifiers":["UniProtKB:P21535"],"synonyms":[{"name":"F-ATPase protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MT-ATP6","type":"exact"}],"termid":"PR:P21535"}


id: PBO:0030673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0030673"}


id: MONDO:0006078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma (non-Hodgkin or Hodgkin) arising from the central nervous system and occurring in HIV-positive patients.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"virus associated tumor","termid":"MONDO:0017341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"AIDS-related primary central nervous system lymphoma","secondary_identifiers":["EFO:1000077","NCIT:C8284","UMLS:C0281241","MEDGEN:79263"],"synonyms":[{"name":"AIDS related lymphoma of primary central nervous system","type":"exact"},{"name":"AIDS related lymphoma of the primary central nervous system","type":"exact"},{"name":"AIDS related primary CNS lymphoma","type":"exact"},{"name":"AIDS related primary central nervous system lymphoma","type":"exact"},{"name":"AIDS-related lymphoma of primary central nervous system","type":"exact"},{"name":"AIDS-related lymphoma of the primary central nervous system","type":"exact"},{"name":"AIDS-related primary CNS lymphoma","type":"exact"}],"termid":"MONDO:0006078","xrefs":{"Monarch":{"xref_id":"0006078"}}}


id: PBO:0068270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 7","termid":"PBO:0068270"}


id: MONDO:0001940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lung parenchyma that is associated with pleurisy, inflammation of the pleura.","definition_xrefs":["MESH:D011001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pleurisy","termid":"MONDO:0000986"},{"relation_name":"is_a","term_name":"pneumonia","termid":"MONDO:0005249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleuropneumonia","secondary_identifiers":["SCTID:60485005","UMLS:C0032241","MEDGEN:18524","DOID:14319","icd11.foundation:1272236893"],"termid":"MONDO:0001940","xrefs":{"Monarch":{"xref_id":"0001940"}}}


id: GO:0002695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of leukocyte activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"is_a","term_name":"negative regulation of cell activation","termid":"GO:0050866"},{"relation_name":"negatively_regulates","term_name":"leukocyte activation","termid":"GO:0045321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte activation","synonyms":[{"name":"down regulation of leukocyte activation","type":"exact"},{"name":"down-regulation of leukocyte activation","type":"exact"},{"name":"downregulation of leukocyte activation","type":"exact"},{"name":"inhibition of leukocyte activation","type":"narrow"},{"name":"negative regulation of immune cell activation","type":"exact"},{"name":"negative regulation of leucocyte activation","type":"exact"}],"termid":"GO:0002695"}


id: PBO:0079149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 10","termid":"PBO:0079149"}


id: GO:0140489
data:
  {"annotated_genes":["SJAG_01756","SJAG_02609","SJAG_02886","SJAG_00856","SJAG_03835","SJAG_01215"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117586,109981,100426,79363,106816,110959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140490"}]},"cv_name":"molecular_function","definition":"The action of a molecule that provides a shape or a sequence mimicking or complementary to the final product, providing template for copying the original molecule's shape or sequence.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02609":null,"SJAG_02886":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"molecular template activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140489","terms_by_termid":{"GO:0140490":null}}


id: GO:0033007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of mast cell activation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of mast cell activation","termid":"GO:0033004"},{"relation_name":"is_a","term_name":"regulation of mast cell activation involved in immune response","termid":"GO:0033006"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"mast cell activation involved in immune response","termid":"GO:0002279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell activation involved in immune response","synonyms":[{"name":"negative regulation of mast cell activation during immune response","type":"related"}],"termid":"GO:0033007"}


id: GO:0044031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism adds a phosphate group to a protein of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host protein by phosphorylation (obsolete GO:0044031)","termid":"GO:0044031"}


id: GO:0102560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-phosphonato-alpha-D-ribose cyclic-1,2-phosphate + H2O = D-ribofuranose 2,5-bisphosphate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-phospho-alpha-D-ribose 1,2-cyclic phosphate 1-phosphohydrolase activity (obsolete GO:0102560)","synonyms":[{"name":"phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase","type":"exact"}],"termid":"GO:0102560"}


id: GO:0070542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fatty acid stimulus.","definition_xrefs":["GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fatty acid","termid":"GO:0070542"}


id: MONDO:0100327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of bile acid synthesis","termid":"MONDO:0019218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"hypercholanemia, familial","secondary_identifiers":["UMLS:C1843139","OMIMPS:607748","MEDGEN:334689"],"synonyms":[{"name":"familial hypercholanemia","type":"exact"},{"name":"hypercholanemia, familial","type":"exact"}],"termid":"MONDO:0100327","xrefs":{"Monarch":{"xref_id":"0100327"}}}


id: PBO:0063158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 4","termid":"PBO:0063158"}


id: PBO:0113798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase/ GDP-Man:Man2GlcNAc2-PP-dolichol alpha-1,6-mannosyltransferase","termid":"PBO:0113798"}


id: PBO:0041754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin","termid":"PBO:0041754"}


id: PBO:0087574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the 19S regulatory particle of the 26S proteasome lid; acts as a ubiquitin receptor for the proteasome; null mutants accumulate ubiquitinated Gcn4p and display decreased 26S proteasome stability; protein abundance increases in response to DNA replication stress","termid":"PBO:0087574"}


id: MONDO:0044875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder affecting the smallest coronary arteries. Causes include atherosclerosis and arterial spasm. Chest pain is a frequently observed symptom.","definition_xrefs":["NCIT:C84478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"coronary microvascular disorder","secondary_identifiers":["UMLS:C0206064","MEDGEN:104771"],"synonyms":[{"name":"CMD","type":"exact"},{"name":"coronary microvascular disease","type":"exact"},{"name":"heart disease of microvascular endothelium","type":"exact"},{"name":"microvascular endothelium heart disease","type":"exact"}],"termid":"MONDO:0044875","xrefs":{"Monarch":{"xref_id":"0044875"}}}


id: GO:1903278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium ion export across the plasma membrane.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:17095720","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transport","termid":"GO:1902307"},{"relation_name":"is_a","term_name":"regulation of sodium ion export across plasma membrane","termid":"GO:1903276"},{"relation_name":"positively_regulates","term_name":"sodium ion export across plasma membrane","termid":"GO:0036376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sodium ion export across plasma membrane","secondary_identifiers":["GO:1903275"],"synonyms":[{"name":"activation of sodium export","type":"narrow"},{"name":"activation of sodium ion export","type":"narrow"},{"name":"activation of sodium ion export from cell","type":"narrow"},{"name":"positive regulation of sodium export","type":"related"},{"name":"positive regulation of sodium ion export","type":"related"},{"name":"positive regulation of sodium ion export from cell","type":"exact"},{"name":"up regulation of sodium export","type":"related"},{"name":"up regulation of sodium ion export","type":"related"},{"name":"up regulation of sodium ion export from cell","type":"exact"},{"name":"up-regulation of sodium export","type":"related"},{"name":"up-regulation of sodium ion export","type":"related"},{"name":"up-regulation of sodium ion export from cell","type":"exact"},{"name":"upregulation of sodium export","type":"related"},{"name":"upregulation of sodium ion export","type":"related"},{"name":"upregulation of sodium ion export from cell","type":"exact"}],"termid":"GO:1903278"}


id: GO:0102381
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: stevioside + UDP-alpha-D-glucose = H+ + rebaudioside A + UDP.","definition_xrefs":["RHEA:61756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"stevioside glucosyltransferase activity (rebaudioside A forming)","secondary_identifiers":["MetaCyc:RXN-13517"],"termid":"GO:0102381"}


id: PBO:0045693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 1","termid":"PBO:0045693"}


id: PBO:0064851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 2","termid":"PBO:0064851"}


id: PBO:0052702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 3","termid":"PBO:0052702"}


id: PBO:0000397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 3","termid":"PBO:0000397"}


id: PBO:0080613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 47","termid":"PBO:0080613"}


id: GO:1903089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of 5-amino-1-ribofuranosylimidazole-4-carboxamide from one side of a membrane to the other.","definition_xrefs":["GO_REF:0000066","GOC:TermGenie","PMID:24778186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"5-amino-1-ribofuranosylimidazole-4-carboxamide transmembrane transporter activity","synonyms":[{"name":"acadesine transporter activity","type":"exact"}],"termid":"GO:1903089"}


id: PBO:0039549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD44 divergent transcript","termid":"PBO:0039549"}


id: PBO:0054047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1388","termid":"PBO:0054047"}


id: PBO:0048571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyl carboxylase","termid":"PBO:0048571"}


id: MONDO:0000314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary bacterial infectious disease","secondary_identifiers":["DOID:0050338"],"termid":"MONDO:0000314","xrefs":{"Monarch":{"xref_id":"0000314"}}}


id: GO:0006779
data:
  {"annotated_genes":["SJAG_03173","SJAG_00626","SJAG_01192","SJAG_05283","SJAG_04109","SJAG_04515","SJAG_04984","SJAG_04944","SJAG_01372","SJAG_02876","SJAG_00699","SJAG_01841","SJAG_01155","SJAG_03862","SJAG_02896","SJAG_01786","SJAG_04397","SJAG_03961","SJAG_00097"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78700,80385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[98555,114259,74702,101430,100579,112252,105548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[63181,63043,67804,64866,57244,59215,60293,80255],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006782"},{"annotations":[71766,77141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"},{"annotations":[75133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006780"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.","definition_xrefs":["GOC:jl","ISBN:0198506732","Wikipedia:Porphyrin#Natural_formation"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00626":null,"SJAG_00699":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04515":null,"SJAG_04944":null,"SJAG_04984":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"porphyrin-containing compound biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"porphyrin anabolism","type":"related"},{"name":"porphyrin biosynthesis","type":"related"},{"name":"porphyrin biosynthetic process","type":"related"},{"name":"porphyrin formation","type":"related"},{"name":"porphyrin synthesis","type":"related"}],"termid":"GO:0006779","terms_by_termid":{"GO:0006780":null,"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null}}


id: PATO:0002475
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A position quality inhering in a bearer by virtue of the bearer's existing near the end of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subterminal","termid":"PATO:0002475"}


id: PBO:0029269
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_binding_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029269"}


id: GO:0102755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A15 (closed lactone form) + O2 + 2-oxoglutarate = gibberellin A37 (closed lactone form) + succinate + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin-15(closed lactone form),2-oxoglutarate:oxygen oxidoreductase (3beta-hydroxylating) activity (obsolete GO:0102755)","termid":"GO:0102755"}


id: GO:0043224
data:
  {"annotated_genes":["SJAG_02822","SJAG_00341","SJAG_02162","SJAG_03219","SJAG_02591","SJAG_02651"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90926,94677,98102,105219,109444,110690],"is_not":false,"summary":null,"term":"GO:0043224"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex, located in the nucleus, in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degradation by the proteasome. The best characterized complexes are those from yeast and mammals (with core subunits named Cdc53/Cul1, Rbx1/Hrt1/Roc1).","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ubiquitin ligase complex","termid":"GO:0000152"},{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_02162":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_03219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"nuclear SCF ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear SCF complex","type":"exact"},{"name":"nuclear Skp1/Cul1/F-box protein complex","type":"exact"},{"name":"nuclear cullin complex","type":"exact"}],"termid":"GO:0043224","terms_by_termid":{"GO:0043224":null}}


id: MONDO:0015253
data:
  {"annotated_genes":["SJAG_03762","SJAG_02280","SJAG_04414","SJAG_01512","SJAG_04746","SJAG_00921","SJAG_02358","SJAG_03919","SJAG_04695","SJAG_03254","SJAG_01621","SJAG_03335","SJAG_02597","SJAG_01588","SJAG_02904","SJAG_02894","SJAG_02749","SJAG_04204","SJAG_01366","SJAG_01568","SJAG_01296","SJAG_00468","SJAG_02335","SJAG_04066","SJAG_02802","SJAG_00465","SJAG_02046","SJAG_00166","SJAG_02585","SJAG_02340","SJAG_04168","SJAG_00749","SJAG_04478"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85854,85853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007110"},{"annotations":[86625,86624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013217"},{"annotations":[87514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013964"},{"annotations":[86148,86149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014245"},{"annotations":[86724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014394"},{"annotations":[85662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010493"},{"annotations":[86754,86753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011639"},{"annotations":[87148,87149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044309"},{"annotations":[87152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044310"},{"annotations":[86382,86383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032668"},{"annotations":[86384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032669"},{"annotations":[86387,86386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032670"},{"annotations":[86104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031071"},{"annotations":[86183,86182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012529"},{"annotations":[87086,87087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012924"},{"annotations":[87085,87084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012925"},{"annotations":[87103,87102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012937"},{"annotations":[87100,87101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012938"},{"annotations":[87104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012939"},{"annotations":[86627,86626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013216"}]},"cv_name":"mondo","definition":"A congenital aregenerative and often macrocytic anemia with erythroblastopenia.","definition_xrefs":["Orphanet:124"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete Mendelian syndromes with cleft lip/palate (obsolete MONDO:0015335)","termid":"MONDO:0015335"},{"relation_name":"excluded_subClassOf","term_name":"obsolete polymalformative genetic syndrome with increased risk of developing cancer (obsolete MONDO:0015945)","termid":"MONDO:0015945"},{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of purine metabolism","termid":"MONDO:0019236"},{"relation_name":"is_a","term_name":"pure red-cell aplasia","termid":"MONDO:0001705"},{"relation_name":"is_a","term_name":"inherited aplastic anemia","termid":"MONDO:0001713"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00166":null,"SJAG_00465":null,"SJAG_00468":null,"SJAG_00749":null,"SJAG_00921":null,"SJAG_01296":null,"SJAG_01366":null,"SJAG_01512":null,"SJAG_01568":null,"SJAG_01588":null,"SJAG_01621":null,"SJAG_02046":null,"SJAG_02280":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02358":null,"SJAG_02585":null,"SJAG_02597":null,"SJAG_02749":null,"SJAG_02802":null,"SJAG_02894":null,"SJAG_02904":null,"SJAG_03254":null,"SJAG_03335":null,"SJAG_03762":null,"SJAG_03919":null,"SJAG_04066":null,"SJAG_04168":null,"SJAG_04204":null,"SJAG_04414":null,"SJAG_04478":null,"SJAG_04695":null,"SJAG_04746":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Diamond-Blackfan anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1260899","NORD:773","MESH:D029503","NANDO:1200890","NANDO:2200614","MEDGEN:266045","DOID:1339","OMIMPS:105650","MedDRA:10062989","SCTID:88854002","GARD:6274","NCIT:C61236"],"synonyms":[{"name":"Aase syndrome","type":"exact"},{"name":"Aase-Smith II syndrome","type":"exact"},{"name":"BDS","type":"related"},{"name":"Blackfan - Diamond syndrome","type":"exact"},{"name":"Blackfan Diamond syndrome","type":"related"},{"name":"Blackfan-Diamond anaemia","type":"exact"},{"name":"Blackfan-Diamond anemia","type":"exact"},{"name":"DBA","type":"exact"},{"name":"Diamond Blackfan Anemia","type":"exact"},{"name":"Diamond-Blackfan anemia","type":"exact"},{"name":"Red cell aplasia, pure hereditary","type":"related"},{"name":"anaemia Diamond Blackfan type","type":"related"},{"name":"anaemia congenital erythroid hypoplastic","type":"related"},{"name":"anemia Diamond Blackfan type","type":"related"},{"name":"anemia congenital erythroid hypoplastic","type":"related"},{"name":"aregenerative anaemia chronic congenital","type":"related"},{"name":"aregenerative anemia chronic congenital","type":"related"},{"name":"chronic constitutional pure red cell anaemia","type":"exact"},{"name":"chronic constitutional pure red cell anemia","type":"exact"},{"name":"congenital PRCA","type":"exact"},{"name":"congenital hypoplastic anaemia","type":"exact"},{"name":"congenital hypoplastic anemia","type":"exact"},{"name":"congenital hypoplastic anemia, Blackfan-Diamond type","type":"exact"},{"name":"congenital pure red cell aplasia","type":"exact"},{"name":"erythrogenesis imperfecta","type":"exact"},{"name":"inherited erythroblastopenia","type":"exact"}],"termid":"MONDO:0015253","terms_by_termid":{"MONDO:0007110":null,"MONDO:0010493":null,"MONDO:0011639":null,"MONDO:0012529":null,"MONDO:0012924":null,"MONDO:0012925":null,"MONDO:0012937":null,"MONDO:0012938":null,"MONDO:0012939":null,"MONDO:0013216":null,"MONDO:0013217":null,"MONDO:0013964":null,"MONDO:0014245":null,"MONDO:0014394":null,"MONDO:0031071":null,"MONDO:0032668":null,"MONDO:0032669":null,"MONDO:0032670":null,"MONDO:0044309":null,"MONDO:0044310":null},"xrefs":{"Monarch":{"xref_id":"0015253"}}}


id: PBO:0004495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumble family pantothenate kinase (predicted)","termid":"PBO:0004495"}


id: PBO:0111917
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENA/THI domain","termid":"PBO:0111917"}


id: PBO:0053863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1138","termid":"PBO:0053863"}


id: PATO:0001227
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits variation or change.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant","synonyms":[{"name":"variable","type":"exact"}],"termid":"PATO:0001227"}


id: GO:0006061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sorbitol (D-glucitol), one of the ten stereoisomeric hexitols. It can be derived from glucose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sorbitol metabolic process","termid":"GO:0006060"},{"relation_name":"is_a","term_name":"hexitol biosynthetic process","termid":"GO:0019406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"sorbitol biosynthetic process","synonyms":[{"name":"sorbitol anabolism","type":"exact"},{"name":"sorbitol biosynthesis","type":"exact"},{"name":"sorbitol formation","type":"exact"},{"name":"sorbitol synthesis","type":"exact"}],"termid":"GO:0006061"}


id: GO:0046571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-keto-4-methylthiobutyrate + aspartate = methionine + oxaloacetate.","definition_xrefs":["MetaCyc:R15-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartate-2-keto-4-methylthiobutyrate transaminase activity (obsolete GO:0046571)","termid":"GO:0046571"}


id: PBO:0066851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 151","termid":"PBO:0066851"}


id: MOD:01767
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-131 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-131 reporter+balance reagent acylated residue","termid":"MOD:01760"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-131 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01767"}


id: GO:0016155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + H2O + NADP+ = (6S)-5,6,7,8-tetrahydrofolate + CO2 + H+ + NADPH.","definition_xrefs":["RHEA:10180","EC:1.5.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"formyltetrahydrofolate dehydrogenase activity","secondary_identifiers":["MetaCyc:FORMYLTETRAHYDROFOLATE-DEHYDROGENASE-RXN","KEGG_REACTION:R00941"],"synonyms":[{"name":"10-formyl tetrahydrofolate:NADP oxidoreductase activity","type":"related"},{"name":"10-formyl-H2PtGlu:NADP oxidoreductase activity","type":"related"},{"name":"10-formyl-H4folate dehydrogenase activity","type":"related"},{"name":"10-formyltetrahydrofolate dehydrogenase activity","type":"related"},{"name":"10-formyltetrahydrofolate:NADP+ oxidoreductase activity","type":"related"},{"name":"N10-formyltetrahydrofolate dehydrogenase activity","type":"related"}],"termid":"GO:0016155"}


id: PR:Q9P7Q4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vesicle-fusing ATPase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01950","PANTHER:PTHR23078:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicular-fusion protein sec18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.11c","secondary_identifiers":["UniProtKB:Q9P7Q4"],"synonyms":[{"name":"Spom972h-NSF","type":"exact"}],"termid":"PR:Q9P7Q4"}


id: MONDO:0006339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, unilateral tumor that arises from the ovary and is characterized by the presence of conspicuous microcystic changes, cellular areas, and a fibrous stroma.","definition_xrefs":["NCIT:C121953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign ovarian sex cord-stromal tumor","termid":"MONDO:0024387"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian microcystic stromal tumor","secondary_identifiers":["EFO:1000424","UMLS:C4054287","Orphanet:569248","GARD:22304","MEDGEN:889995"],"synonyms":[{"name":"MCST","type":"exact"},{"name":"microcystic stromal tumor","type":"exact"},{"name":"microcystic stromal tumour","type":"exact"}],"termid":"MONDO:0006339","xrefs":{"Monarch":{"xref_id":"0006339"}}}


id: PBO:0028993
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_proline_import","termid":"PBO:0028993"}


id: MONDO:0017507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Congenital absence/hypoplasia of thumb, bilateral is a rare developmental defect during embryogenesis characterized by bilateral underdevelopment of the thumbs, ranging from a slight decrease in thumb size to complete absence of the thumbs. This anomaly counts for 20-60% of thumb hypoplasias.","definition_xrefs":["Orphanet:295112"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital absence/hypoplasia of thumb, bilateral (obsolete MONDO:0017507)","synonyms":[{"name":"thumb hypodactyly, bilateral","type":"exact"},{"name":"thumb oligodactyly, bilateral","type":"exact"}],"termid":"MONDO:0017507","xrefs":{"Monarch":{"xref_id":"0017507"}}}


id: MONDO:0014791
data:
  {"annotated_genes":["SJAG_02873"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86120],"is_not":false,"summary":null,"term":"MONDO:0014791"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02873":null},"genotype_count":0,"is_obsolete":false,"name":"Luscan-Lumish syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:597738","MEDGEN:898669","GARD:13789","OMIM:616831","UMLS:C4085873"],"synonyms":[{"name":"LLS","type":"exact"},{"name":"LLs","type":"exact"},{"name":"Luscan-Lumish syndrome","type":"exact"},{"name":"Luscan-Lumish syndrome; LLs","type":"exact"},{"name":"SETD2-related overgrowth syndrome","type":"exact"}],"termid":"MONDO:0014791","terms_by_termid":{"MONDO:0014791":null},"xrefs":{"Monarch":{"xref_id":"0014791"}}}


id: MOD:01327
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to 9x(13)C labeled L-phenylalanine.","definition_xrefs":["Unimod:184#F","PubMed:12716131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9x(13)C labeled residue","termid":"MOD:00540"},{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"9x(13)C labeled L-phenylalanine","synonyms":[{"name":"13C(9) Silac label","type":"related"},{"name":"Label:13C(9)","type":"related"}],"termid":"MOD:01327"}


id: PBO:0062286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily K member 3","termid":"PBO:0062286"}


id: GO:0036462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An extrinsic apoptotic signaling pathway initiated by the binding of the ligand TRAIL (tumor necrosis factor-related apoptosis-inducing ligand) to a death receptor on the cell surface.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:21785459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:0008625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:0036462"}


id: PBO:0029801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-misoriented_actin_cables","termid":"PBO:0029801"}


id: PBO:0003925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleocytoplasmic transport chaperone Srp40 (predicted)","termid":"PBO:0003925"}


id: GO:0032658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-15 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-15 production","termid":"GO:0032618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-15 production","secondary_identifiers":["GO:0045372"],"synonyms":[{"name":"regulation of IL-15 production","type":"exact"},{"name":"regulation of interleukin-15 biosynthetic process","type":"narrow"}],"termid":"GO:0032658"}


id: PBO:0047769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box A1","termid":"PBO:0047769"}


id: GO:0045804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of eclosion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eclosion","termid":"GO:0007563"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"eclosion","termid":"GO:0007562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eclosion","synonyms":[{"name":"down regulation of eclosion","type":"exact"},{"name":"down-regulation of eclosion","type":"exact"},{"name":"downregulation of eclosion","type":"exact"},{"name":"inhibition of eclosion","type":"narrow"}],"termid":"GO:0045804"}


id: GO:0071440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the addition of an acetyl group to histone H3 at position 14 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K14 acetylation (obsolete GO:0071440)","synonyms":[{"name":"regulation of histone H3 acetylation at K14","type":"exact"},{"name":"regulation of histone H3K14 acetylation","type":"exact"}],"termid":"GO:0071440"}


id: PBO:0117062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTM antisense RNA 2","termid":"PBO:0117062"}


id: GO:0044796
data:
  {"annotated_genes":["SJAG_04190"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043626"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of increasing the processivity of nucleotide polymerization by DNA polymerase as a part of DNA replication.","definition_xrefs":["GOC:jl","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator complex","termid":"GO:0150005"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04190":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA polymerase processivity factor complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0044796","terms_by_termid":{"GO:0043626":null}}


id: PBO:0031849
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spore","termid":"PBO:0031849"}


id: PR:O74489
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A quinone oxidoreductase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04829","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quinone oxidoreductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.16c","secondary_identifiers":["UniProtKB:O74489"],"synonyms":[{"name":"NADPH:quinone reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-qorA","type":"exact"}],"termid":"PR:O74489"}


id: PBO:0108927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCSER2 pseudogene 1","termid":"PBO:0108927"}


id: PBO:0074188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 9","termid":"PBO:0074188"}


id: FYPO:0002857
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutathione synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutathione synthase activity","termid":"FYPO:0002856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abolished glutathione synthase activity","synonyms":[{"name":"abolished GSH synthase activity","type":"exact"},{"name":"abolished glutathione synthetase activity","type":"exact"},{"name":"glutathione synthase activity abolished","type":"exact"}],"termid":"FYPO:0002857"}


id: MOD:00094
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine amide.","definition_xrefs":["RESID:AA0085","PubMed:1892838","PubMed:7149738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine amide","synonyms":[{"name":"(2R)-2-amino-3-sulfanylpropanamide","type":"exact"},{"name":"2-amino-3-mercaptopropanamide","type":"exact"},{"name":"CysN","type":"exact"},{"name":"L-cysteine amide","type":"exact"},{"name":"MOD_RES Cysteine amide","type":"exact"},{"name":"amidated L-cysteine","type":"exact"},{"name":"cysteinamide","type":"exact"}],"termid":"MOD:00094"}


id: PBO:0061329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B7","termid":"PBO:0061329"}


id: PBO:0059334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S6 pseudogene 4","termid":"PBO:0059334"}


id: GO:0052368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellular components of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption by organism of cellular component in other organism involved in symbiotic interaction (obsolete GO:0052368)","synonyms":[{"name":"catabolism of cellular component in other organism","type":"exact"},{"name":"catabolism of structural constituent in other organism","type":"exact"},{"name":"degradation of cellular component in other organism","type":"exact"},{"name":"disassembly by organism of cellular component in other organism during symbiotic interaction","type":"related"},{"name":"disassembly by organism of cellular component in other organism involved in symbiotic interaction","type":"related"}],"termid":"GO:0052368"}


id: PBO:0066959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 261","termid":"PBO:0066959"}


id: PBO:0077638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin related transmembrane protein 2 pseudogene 1","termid":"PBO:0077638"}


id: PBO:0081579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 506","termid":"PBO:0081579"}


id: GO:0048760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a parenchymal cell. Parenchymal cells are the most abundant and versatile cells in plants. They have very few distinguishing characteristics and botanists classify them as any cell type that cannot be assigned to any other structural or functional class. They can redifferentiate and dedifferentiate and are involved in storage, basic metabolism and other processes. The cells are polyhedral, typically with thin, non-lignified cellulose cell walls and nucleate living protoplasm. They vary in size, form, and wall structure.","definition_xrefs":["ISBN:069716957X","CL:0000668","GOC:jid","PO:0005421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant parenchymal cell differentiation","synonyms":[{"name":"parenchymal cell differentiation","type":"exact"}],"termid":"GO:0048760"}


id: PBO:0017992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1 alpha related protein Hbs1 (predicted)","termid":"PBO:0017992"}


id: GO:0097229
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short tip of the sperm flagellum, adjacent to the sperm principal piece and furthest from the sperm head, which contains only the axoneme surrounded by the plasma membrane.","definition_xrefs":["MP:0009837","GOC:sart","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm end piece","termid":"GO:0097229"}


id: PBO:0069567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 839, pseudogene","termid":"PBO:0069567"}


id: GO:0010508
data:
  {"annotated_genes":["SJAG_04249","SJAG_00824","SJAG_04502","SJAG_02765","SJAG_01184","SJAG_04496","SJAG_05346","SJAG_04435","SJAG_00704","SJAG_05000","SJAG_01716","SJAG_03851","SJAG_00169","SJAG_05289","SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73938,73958,80272,99209,99776,110044,112218,114964],"is_not":false,"summary":null,"term":"GO:0010508"},{"annotations":[108931,109022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[97955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[69339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903599"},{"annotations":[75783,106623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[89847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"regulation of autophagy","termid":"GO:0010506"},{"relation_name":"positively_regulates","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00704":null,"SJAG_00824":null,"SJAG_01184":null,"SJAG_01716":null,"SJAG_02433":null,"SJAG_02765":null,"SJAG_03851":null,"SJAG_04249":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_05000":null,"SJAG_05289":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"positive regulation of autophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0010508","terms_by_termid":{"GO:0010508":null,"GO:0016239":null,"GO:0140501":null,"GO:1901098":null,"GO:1903599":null,"GO:2000786":null}}


id: PR:O74789
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein phosphatase 4 catalytic subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11668:SF22","PRO:DNx","OMA:SCHPO03924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase C26H8.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.05c","secondary_identifiers":["UniProtKB:O74789"],"synonyms":[{"name":"Spom972h-PPP4C","type":"exact"}],"termid":"PR:O74789"}


id: GO:0018956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phenanthrene, a tricyclic aromatic hydrocarbon, where trans-9(R),10(R)-dihydrodiolphenanthrene is the principal intermediate metabolite.","definition_xrefs":["UM-BBD_pathwayID:pha3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenanthrene catabolic process","termid":"GO:0042216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenanthrene catabolic process via trans-9(R),10(R)-dihydrodiolphenanthrene","synonyms":[{"name":"phenanthrene breakdown via trans-9(R),10(R)-dihydrodiolphenanthrene","type":"exact"},{"name":"phenanthrene degradation via trans-9(R),10(R)-dihydrodiolphenanthrene","type":"exact"}],"termid":"GO:0018956"}


id: PBO:0060340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin VI","termid":"PBO:0060340"}


id: PBO:0047023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A26","termid":"PBO:0047023"}


id: PBO:0041795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping actin protein of muscle Z-line subunit beta","termid":"PBO:0041795"}


id: PBO:0052676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 44","termid":"PBO:0052676"}


id: MONDO:0009783
data:
  {"annotated_genes":["SJAG_02658"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86679],"is_not":false,"summary":null,"term":"MONDO:0009783"}]},"cv_name":"mondo","definition":"Any autosomal recessive progressive external ophthalmoplegia in which the cause of the disease is a mutation in the POLG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"},{"relation_name":"is_a","term_name":"autosomal recessive progressive external ophthalmoplegia","termid":"MONDO:0016810"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02658":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005336","MONDO:0004069","MONDO:0005066","MONDO:0002320"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111522","GARD:15215","UMLS:C4225153","OMIM:258450","MEDGEN:897191"],"synonyms":[{"name":"PEOB1","type":"related"},{"name":"POLG autosomal recessive progressive external ophthalmoplegia","type":"exact"},{"name":"arPEO","type":"related"},{"name":"autosomal recessive progressive external ophthalmoplegia","type":"related"},{"name":"autosomal recessive progressive external ophthalmoplegia caused by mutation in POLG","type":"exact"},{"name":"cerebellar ataxia infantile with progressive external ophthalmoplegia","type":"related"},{"name":"progressive external ophthalmoplegia with cerebellar ataxia infantile","type":"related"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 1","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive type 1","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal recessive 1","type":"related"}],"termid":"MONDO:0009783","terms_by_termid":{"MONDO:0009783":null},"xrefs":{"Monarch":{"xref_id":"0009783"}}}


id: GO:0097631
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the omegasome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mf","PMID:24591649","PMID:18725538"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of omegasome membrane (obsolete GO:0097631)","synonyms":[{"name":"integral to omegasome membrane","type":"narrow"},{"name":"omegasome integral membrane protein","type":"related"}],"termid":"GO:0097631"}


id: PBO:0005468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase Rrg1 (predicted)","termid":"PBO:0005468"}


id: PBO:0040351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g like","termid":"PBO:0040351"}


id: MONDO:0011263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia and progressive central nervous system degeneration, lethal","secondary_identifiers":["UMLS:C1865117","OMIM:602613","MEDGEN:400685","MESH:C566514"],"synonyms":[{"name":"skeletal dysplasia and progressive central nervous system degeneration, lethal","type":"exact"}],"termid":"MONDO:0011263","xrefs":{"Monarch":{"xref_id":"0011263"}}}


id: PBO:0046937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM53B antisense RNA 1","termid":"PBO:0046937"}


id: GO:0080061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetonitrile + 2 H2O = indole-3-acetic acid + NH3.","definition_xrefs":["RHEA:45776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"indole-3-acetonitrile nitrilase activity","secondary_identifiers":["MetaCyc:RXN-1404"],"termid":"GO:0080061"}


id: GO:0051860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process, either active or passive, by which an organism evades or tolerates the effects of the defense(s) or defense molecules of a symbiont organism. Symbiont defenses may be induced by the presence of the organism or may be preformed (e.g. physical barriers). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion or tolerance of symbiont defenses (obsolete GO:0051860)","termid":"GO:0051860"}


id: PBO:0012256
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae TRK1 and TRK2","termid":"PBO:0012256"}


id: PBO:0067936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 238","termid":"PBO:0067936"}


id: MONDO:1011931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upper airway syndrome, non-human animal","secondary_identifiers":["OMIA:001893"],"termid":"MONDO:1011931","xrefs":{"Monarch":{"xref_id":"1011931"}}}


id: PBO:0051083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant gamma 1 (G1m marker)","termid":"PBO:0051083"}


id: PBO:0015662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-bisphosphate 2-phosphatase (predicted)","termid":"PBO:0015662"}


id: PBO:0054859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2273","termid":"PBO:0054859"}


id: MONDO:0016099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Overlap myositis (OM) is a form of idiopathic inflammatory myopathy (IIM) characterized by myositis with at least one clinical and/or autoantibody overlap feature.","definition_xrefs":["Orphanet:206572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired idiopathic inflammatory myopathy","termid":"MONDO:0020122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"overlap myositis","secondary_identifiers":["GARD:20352","MEDGEN:1814440","UMLS:C5679784"],"synonyms":[{"name":"adult-onset overlap myositis","type":"exact"},{"name":"non-specific myositis","type":"exact"}],"termid":"MONDO:0016099","xrefs":{"Monarch":{"xref_id":"0016099"}}}


id: MONDO:0017252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary airway malformation","termid":"MONDO:0016580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary airway malformation type 4","secondary_identifiers":["Orphanet:280854","GARD:21097","MEDGEN:1777484","UMLS:C5437760","icd11.foundation:1737719514"],"synonyms":[{"name":"CPAM type 4","type":"exact"},{"name":"congenital cystic adenomatoid malformation of the lung type 4","type":"exact"},{"name":"congenital cystic adenomatous malformation of the lung type 4","type":"exact"}],"termid":"MONDO:0017252","xrefs":{"Monarch":{"xref_id":"0017252"}}}


id: MONDO:0850196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma that is characterized as a molecular subtype by activation of the WNT pathway and TP53 mutations may be present or absent.","definition_xrefs":["DOID:0080702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma WNT activated","secondary_identifiers":["NCIT:C129440","UMLS:C4331965","MEDGEN:1392356"],"termid":"MONDO:0850196","xrefs":{"Monarch":{"xref_id":"0850196"}}}


id: GO:0009358
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses polyphosphate kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"polyphosphate kinase complex","termid":"GO:0009358"}


id: MONDO:0009862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dihydropteridine reductase (DHPR) deficiency is a severe form of hyperphenylalaninemia (HPA) due to impaired regeneration of tetrahydrobiopterin (BH4), leading to decreased levels of neurotransmitters (dopamine, serotonin) and folate in cerebrospinal fluid, and causing neurological symptoms such as psychomotor delay, hypotonia, seizures, abnormal movements, hypersalivation, and swallowing difficulties.","definition_xrefs":["Orphanet:226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperphenylalaninemia due to tetrahydrobiopterin deficiency","termid":"MONDO:0016543"},{"relation_name":"is_a","term_name":"tetrahydrobiopterin metabolic process disease","termid":"MONDO:0045014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0004736"],"is_obsolete":false,"name":"dihydropteridine reductase deficiency","secondary_identifiers":["icd11.foundation:1931239861","MEDGEN:75682","OMIM:261630","DOID:0081130","NCIT:C138173","SCTID:58256000","GARD:4319","UMLS:C0268465"],"synonyms":[{"name":"6,7-dihydropteridine reductase activity disease","type":"exact"},{"name":"DHPR deficiency","type":"related"},{"name":"HPABH4C","type":"related"},{"name":"PKU type 2","type":"exact"},{"name":"Qdpr deficiency","type":"related"},{"name":"dihydropteridine reductase deficiency","type":"exact"},{"name":"disorder of 6,7-dihydropteridine reductase activity","type":"exact"},{"name":"hyperphenylalaninemia due to dihydropteridine reductase deficiency","type":"exact"},{"name":"hyperphenylalaninemia, BH-4-deficient, C","type":"related"},{"name":"hyperphenylalaninemia, BH4-deficient C","type":"exact"},{"name":"hyperphenylalaninemia, BH4-deficient, C","type":"related"},{"name":"hyperphenylalaninemia, Bh4-deficient, type C","type":"exact"},{"name":"hyperphenylalaninemia, tetrahydrobiopterin-deficient, due to DHPR deficiency","type":"related"},{"name":"phenylketonuria type 2","type":"exact"},{"name":"quinoid dihydropteridine reductase deficiency","type":"related"}],"termid":"MONDO:0009862","xrefs":{"Monarch":{"xref_id":"0009862"}}}


id: GO:0061242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a mesonephric nephron tubule over time, from its initial formation to the mature structure. A mesonephric nephron tubule is an epithelial tube that is part of the mesonephric nephron, the functional part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron epithelium development","termid":"GO:0061241"},{"relation_name":"is_a","term_name":"nephron tubule development","termid":"GO:0072080"},{"relation_name":"is_a","term_name":"mesonephric tubule development","termid":"GO:0072164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric nephron tubule development","termid":"GO:0061242"}


id: GO:0006710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of androgens, C19 steroid hormones that can stimulate the development of male sexual characteristics.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"androgen metabolic process","termid":"GO:0008209"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"androgen catabolic process","synonyms":[{"name":"androgen breakdown","type":"exact"},{"name":"androgen catabolism","type":"exact"},{"name":"androgen degradation","type":"exact"}],"termid":"GO:0006710"}


id: PBO:0040992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 2 pseudogene 2","termid":"PBO:0040992"}


id: GO:0008031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of eclosion hormone, a peptide hormone that, upon receptor binding, triggers the death of certain muscles and neurons during insect metamorphosis.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide hormone activity","termid":"GO:0005184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0098772","GO:0005488","GO:0005515","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"eclosion hormone activity","termid":"GO:0008031"}


id: PBO:0080604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 38","termid":"PBO:0080604"}


id: PBO:0012563
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ubiquitin ligase","termid":"PBO:0012563"}


id: PBO:0017551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy/CVT pathway ENTH/VHS domain protein Tax4(predicted)","termid":"PBO:0017551"}


id: GO:0106421
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000515"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: L-glutamate(out) + H+(in) = L-glutamate(in) + H+(out).","definition_xrefs":["PMID:29273736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate transmembrane transporter activity","termid":"GO:0005313"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"amino acid:monoatomic cation antiporter activity","termid":"GO:0140848"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-glutamate:proton antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106421","terms_by_termid":{"GO:0000515":null}}


id: MONDO:0018806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"primary intrahepatic lithiasis","secondary_identifiers":["MEDGEN:1814175","Orphanet:480506","UMLS:C5576557","GARD:21974"],"synonyms":[{"name":"PIHL","type":"exact"},{"name":"primary hepatolithiasis","type":"exact"}],"termid":"MONDO:0018806","xrefs":{"Monarch":{"xref_id":"0018806"}}}


id: PR:G2TRS6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP35G2.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRS6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P35G2.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.17","synonyms":[{"name":"Spom972h-SPBP35G2.17","type":"exact"}],"termid":"PR:G2TRS6"}


id: PBO:0054848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2262","termid":"PBO:0054848"}


id: PBO:0043051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHP1 pseudogene 1","termid":"PBO:0043051"}


id: SO:0005848
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a member of a gene cassette, which is a mobile genetic element.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_array_member","termid":"SO:0000081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_cassette_member","synonyms":[{"name":"gene cassette member","type":"exact"}],"termid":"SO:0005848"}


id: GO:0090194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of glomerulus development, the progression of the glomerulus over time from its initial formation until its mature state. The glomerulus is a capillary tuft surrounded by Bowman's capsule in nephrons of the vertebrate kidney.","definition_xrefs":["GOC:dph","GOC:tb","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of kidney development","termid":"GO:0090185"},{"relation_name":"is_a","term_name":"regulation of glomerulus development","termid":"GO:0090192"},{"relation_name":"negatively_regulates","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glomerulus development","termid":"GO:0090194"}


id: GO:0070821
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a tertiary granule.","definition_xrefs":["PMID:12070036","GOC:rl","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"tertiary granule","termid":"GO:0070820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"tertiary granule membrane","termid":"GO:0070821"}


id: PBO:0031721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_distribution","termid":"PBO:0031721"}


id: MONDO:0018633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"20q11.2 microdeletion syndrome is a rare, genetic, syndromic intellectual disability characterized by psychomotor delay, hypotonia, feeding difficulties, failure to thrive, anomalies of the hands and feet (clinodactyly, camptodactyly, brachydactyly, feet malposition), and craniofacial dysmorphism. Associated prenatal growth retardation, and gastrointestinal, heart and eye anomalies have been reported.","definition_xrefs":["Orphanet:444051"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 20","termid":"MONDO:0016918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20q11.2 microdeletion syndrome","secondary_identifiers":["MEDGEN:1810637","UMLS:C5680063","GARD:21859"],"synonyms":[{"name":"Del(20)(q11.2)","type":"exact"},{"name":"monosomy 20q11","type":"exact"}],"termid":"MONDO:0018633","xrefs":{"Monarch":{"xref_id":"0018633"}}}


id: PBO:0050796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HTR5A antisense RNA 1","termid":"PBO:0050796"}


id: PR:G2TRT7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1235.17 gene.","definition_xrefs":["UniProtKB:G2TRT7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C1235.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.17","synonyms":[{"name":"Spom972h-SPCC1235.17","type":"exact"}],"termid":"PR:G2TRT7"}


id: PBO:0057320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519a-1","termid":"PBO:0057320"}


id: GO:0001603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete vasopressin-like receptor activity (obsolete GO:0001603)","synonyms":[{"name":"vasopressin-like receptor activity","type":"exact"}],"termid":"GO:0001603"}


id: PBO:0052937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 22-1","termid":"PBO:0052937"}


id: GO:0103012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + 2 a reduced ferredoxin + an oxidized thioredoxin = 2 an oxidized ferredoxin + a reduced thioredoxin, involving a 4Fe-4S cluster and an adjacent active-site disulfide.","definition_xrefs":["PMID:14769790","GOC:pz","RHEA:42336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor","termid":"GO:0016673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ferredoxin-thioredoxin reductase activity","secondary_identifiers":["EC:1.8.7.2","MetaCyc:RXN-9944","GO:0030385"],"synonyms":[{"name":"ferredoxin:thioredoxin reductase activity","type":"exact"}],"termid":"GO:0103012"}


id: PBO:0083376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps 3' end of verified ORF SCW10/YMR305C","termid":"PBO:0083376"}


id: GO:0015689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of molybdate (MoO4 2-) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Molybdate is the bivalent anion derived from molybdic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"molybdate ion transport","termid":"GO:0015689"}


id: MONDO:0014665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Charcot-Marie-Tooth disease in which the cause of the disease is a mutation in the NAGLU gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2V","secondary_identifiers":["DOID:0110178","OMIM:616491","Orphanet:447964","MEDGEN:1800473","UMLS:C5569050","GARD:17777"],"synonyms":[{"name":"CMT2V","type":"exact"},{"name":"Charcot-Marie-Tooth disease caused by mutation in NAGLU","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2V","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2V","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy type 2V","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2V","type":"related"},{"name":"NAGLU Charcot-Marie-Tooth disease","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2 due to NAGLU mutation","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2V","type":"exact"},{"name":"autosomal dominant axonal Charcot-Marie-Tooth disease type 2V","type":"exact"},{"name":"hereditary adult-onset painful axonal polyneuropathy","type":"exact"}],"termid":"MONDO:0014665","xrefs":{"Monarch":{"xref_id":"0014665"}}}


id: PBO:0071249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 90","termid":"PBO:0071249"}


id: PBO:0005302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol kinase Sec59 (predicted)","termid":"PBO:0005302"}


id: PBO:0111646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative cofactor 2 complex subunit Bur6","termid":"PBO:0111646"}


id: GO:0030599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pectin + n H2O = n methanol + pectate.","definition_xrefs":["EC:3.1.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"pectinesterase activity","secondary_identifiers":["MetaCyc:RXN-19782","RHEA:22380"],"synonyms":[{"name":"pectase activity","type":"related"},{"name":"pectin demethoxylase activity","type":"related"},{"name":"pectin methoxylase activity","type":"related"},{"name":"pectin methyl esterase activity","type":"related"},{"name":"pectin methylesterase activity","type":"exact"},{"name":"pectin pectylhydrolase activity","type":"related"},{"name":"pectinoesterase activity","type":"related"}],"termid":"GO:0030599"}


id: PBO:0046190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELMO domain containing 1","termid":"PBO:0046190"}


id: PBO:0073657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO interacting motifs containing 1","termid":"PBO:0073657"}


id: GO:0099527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals that conveys information from the postsynapse to the nucleus via cytoskeletal transport of a protein from a postsynapse to the component to the nucleus where it affects biochemical processes that occur in the nucleus (e.g DNA transcription, mRNA splicing, or DNA/histone modifications).","definition_xrefs":["GOC:dos","PMID:24317321","PMID:25652077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic signal transduction","termid":"GO:0098926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"postsynapse to nucleus signaling pathway","synonyms":[{"name":"postsynaptic signaling to nucleus","type":"exact"}],"termid":"GO:0099527"}


id: PBO:0078252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 27","termid":"PBO:0078252"}


id: GO:0019793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of ISG15 (interferon-stimulated gene-15) from one side of the membrane to the other.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ISG15 carrier activity (obsolete GO:0019793)","synonyms":[{"name":"ISG15 carrier activity","type":"exact"},{"name":"interferon-stimulated gene-15 carrier activity","type":"narrow"}],"termid":"GO:0019793"}


id: GO:0050802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The part of the circadian sleep/wake cycle where the organism is asleep.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian sleep/wake cycle process","termid":"GO:0022410"},{"relation_name":"is_a","term_name":"sleep","termid":"GO:0030431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}


id: PBO:0063406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 2","termid":"PBO:0063406"}


id: PBO:0067815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 117","termid":"PBO:0067815"}


id: MONDO:0006846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe hypertension that is characterized by rapid onset of extremely high blood pressure and hypertension-mediated organ damage.","definition_xrefs":["NCIT:P378","PMID:38658108","PMID:30165516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertensive disorder","termid":"MONDO:0005044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hypertension","secondary_identifiers":["SCTID:70272006","UMLS:C0020540","EFO:1001031","MedDRA:10025600","MEDGEN:9374","MESH:D006974","DOID:10824"],"synonyms":[{"name":"MHT","type":"broad"},{"name":"accelerated-malignant hypertension","type":"exact"},{"name":"hypertensive emergency","type":"exact"},{"name":"malignant phase hypertension","type":"exact"}],"termid":"MONDO:0006846","xrefs":{"Monarch":{"xref_id":"0006846"}}}


id: PBO:0086191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to mammalian oxysterol-binding protein; contains ankyrin repeats and FFAT motif; interacts with ER anchor Scs2p at the nucleus-vacuole junction; regulated by sterol binding; SWH1 has a paralog, OSH2, that arose from the whole genome duplication","termid":"PBO:0086191"}


id: PBO:0048218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric cancer associated transcript 2","termid":"PBO:0048218"}


id: PBO:0043848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase Z","termid":"PBO:0043848"}


id: MONDO:0017847
data:
  {"annotated_genes":["SJAG_16456","SJAG_00797","SJAG_01179"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012664"},{"annotations":[87389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013354"},{"annotations":[86999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013776"}]},"cv_name":"mondo","definition":"Autosomal recessive form of spastic ataxia.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"spastic ataxia","termid":"MONDO:0017845"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_01179":null,"SJAG_16456":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive spastic ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21403","Orphanet:316240","MEDGEN:1826141","UMLS:C5679900"],"synonyms":[{"name":"AR-SPAX","type":"exact"},{"name":"spastic ataxia, autosomal recessive","type":"exact"}],"termid":"MONDO:0017847","terms_by_termid":{"MONDO:0012664":null,"MONDO:0013354":null,"MONDO:0013776":null},"xrefs":{"Monarch":{"xref_id":"0017847"}}}


id: PBO:0017955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial manganese ion transmembrane transporter Mtm1 (predicted)","termid":"PBO:0017955"}


id: PBO:0056245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage interferon regulatory lncRNA","termid":"PBO:0056245"}


id: MONDO:0004051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"aleukemic leukemia cutis","termid":"MONDO:0003729"},{"relation_name":"is_a","term_name":"acute monocytic leukemia","termid":"MONDO:0007896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"aleukemic monocytic leukemia cutis","secondary_identifiers":["MEDGEN:231050","DOID:6958","UMLS:C1332232","NCIT:C5630"],"synonyms":[{"name":"aleukemic monocytic leukemia cutis","type":"exact"}],"termid":"MONDO:0004051","xrefs":{"Monarch":{"xref_id":"0004051"}}}


id: PBO:0082745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; interacts with Rsc3p, Rsc30p, Npl6p, and Htl1p to form a module important for a broad range of RSC functions","termid":"PBO:0082745"}


id: PBO:0062406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 31 pseudogene","termid":"PBO:0062406"}


id: GO:0034959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to the attainment of the full functional capacity of endothelin by conversion of Big-endothelin substrate into mature endothelin.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by endothelin","termid":"GO:0003100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"endothelin maturation","termid":"GO:0034959"}


id: PBO:0043825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbamoyl-phosphate synthase 1","termid":"PBO:0043825"}


id: PBO:0059201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X8, pseudogene","termid":"PBO:0059201"}


id: PBO:0068504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 93, pseudogene","termid":"PBO:0068504"}


id: PBO:0084001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerol dehydrogenase; involved in an alternative pathway for glycerol catabolism used under microaerobic conditions; also has mRNA binding activity; member of the aldo-keto reductase (AKR) family; human homolog AKR1B1 can complement yeast null mutant; protein abundance increases in response to DNA replication stress; GCY1 has a paralog, YPR1, that arose from the whole genome duplication","termid":"PBO:0084001"}


id: MONDO:0013592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anonychia-onychodystrophy syndrome","termid":"MONDO:0019577"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 9","secondary_identifiers":["OMIM:614149","MEDGEN:481577","DOID:0080087","UMLS:C3279947","GARD:15762","SCTID:87065009","ICD9:703.8"],"synonyms":[{"name":"NDNC9","type":"related"},{"name":"anonychia-onycholysis, isolated","type":"related"},{"name":"nail disorder, nonsyndromic congenital, 9","type":"related"},{"name":"nail dysplasia","type":"related"},{"name":"nonsyndromic congenital nail disorder type 9","type":"exact"},{"name":"onychodystrophy","type":"related"}],"termid":"MONDO:0013592","xrefs":{"Monarch":{"xref_id":"0013592"}}}


id: PBO:0090270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase (H3-K36 specific), Jmjc domain Epe1","termid":"PBO:0090270"}


id: MONDO:0016290
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome is characterized by major seizures, dysmorphic features (round face, bulbous nose, wide mouth, prominent philtrum), pes planus, psychomotor retardation and obesity. It has been described in five children (three boys and two girls, one of whom died in infancy) from two unrelated Mexican families. This condition is likely to be transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:2139"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hernández-Aguirre Negrete syndrome","secondary_identifiers":["GARD:3491","UMLS:C2931736","SCTID:721146009","MEDGEN:419481","MESH:C538112"],"synonyms":[{"name":"Ehlers-Danlos syndrome with progeroid facies and mild intellectual disability","type":"related"},{"name":"Ehlers-Danlos syndrome with progeroid facies and mild mental retardation","type":"related"},{"name":"intellectual disability-epilepsy-bulbous nose syndrome","type":"exact"}],"termid":"MONDO:0016290","xrefs":{"Monarch":{"xref_id":"0016290"}}}


id: MONDO:0007698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hand-foot-genital syndrome (HFGS) is a very rare multiple congenital abnormality syndrome characterized by distal limb malformations and urogenital defects.","definition_xrefs":["Orphanet:2438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"hand-foot-genital syndrome","secondary_identifiers":["SCTID:702425002","MEDGEN:331103","GARD:2594","DOID:0060739","MedDRA:10072361","ICD9:759.89","MESH:C535627","OMIM:140000","UMLS:C1841679"],"synonyms":[{"name":"HFG","type":"related"},{"name":"HFG syndrome","type":"related"},{"name":"HFGS","type":"exact"},{"name":"HFU syndrome","type":"related"},{"name":"hand foot genital syndrome","type":"related"},{"name":"hand foot uterus syndrome","type":"related"},{"name":"hand-foot-genital syndrome","type":"exact"},{"name":"hand-foot-uterus syndrome","type":"exact"}],"termid":"MONDO:0007698","xrefs":{"Monarch":{"xref_id":"0007698"}}}


id: PBO:0067184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 242, pseudogene","termid":"PBO:0067184"}


id: PBO:0053184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LENG8 antisense RNA 1","termid":"PBO:0053184"}


id: GO:1903897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the PERK-mediated unfolded protein response.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:bf","GOC:TermGenie","PMID:22013210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900101"},{"relation_name":"regulates","term_name":"PERK-mediated unfolded protein response","termid":"GO:0036499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of PERK-mediated unfolded protein response","synonyms":[{"name":"regulation of EIF2AK3-mediated unfolded protein response","type":"related"},{"name":"regulation of PERK branch of UPR","type":"exact"},{"name":"regulation of PERK signal transduction pathway","type":"broad"},{"name":"regulation of PERK signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"regulation of PKR-like ER kinase signal transduction","type":"exact"},{"name":"regulation of UPR signaling by PERK stress sensor","type":"exact"},{"name":"regulation of endoplasmic reticulum unfolded protein response; PERK signaling","type":"exact"}],"termid":"GO:1903897"}


id: MONDO:0859383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis hystrix","secondary_identifiers":["OMIMPS:146590","UMLS:C0263580","MEDGEN:75527"],"termid":"MONDO:0859383","xrefs":{"Monarch":{"xref_id":"0859383"}}}


id: PR:C6Y4C5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecl2 gene.","definition_xrefs":["UniProtKB:C6Y4C5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.16c","synonyms":[{"name":"Spom972h-ecl2","type":"exact"}],"termid":"PR:C6Y4C5"}


id: PBO:0042092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 162, pseudogene","termid":"PBO:0042092"}


id: PBO:0065188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PROX1 antisense RNA 1","termid":"PBO:0065188"}


id: GO:0045800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of chitin-based cuticular tanning.","definition_xrefs":["GOC:mtg_sensu","GOC:jid","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chitin-based cuticle tanning","termid":"GO:0007564"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"chitin-based cuticle sclerotization","termid":"GO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chitin-based cuticle tanning","synonyms":[{"name":"down regulation of cuticle tanning","type":"exact"},{"name":"down-regulation of cuticle tanning","type":"exact"},{"name":"downregulation of cuticle tanning","type":"exact"},{"name":"inhibition of cuticle tanning","type":"narrow"},{"name":"negative regulation of cuticle hardening","type":"narrow"},{"name":"negative regulation of cuticle tanning","type":"exact"}],"termid":"GO:0045800"}


id: PBO:0062564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AD member 1","termid":"PBO:0062564"}


id: GO:0002707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of lymphocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated immunity","termid":"GO:0002704"},{"relation_name":"is_a","term_name":"regulation of lymphocyte mediated immunity","termid":"GO:0002706"},{"relation_name":"negatively_regulates","term_name":"lymphocyte mediated immunity","termid":"GO:0002449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte mediated immunity","synonyms":[{"name":"down regulation of lymphocyte mediated immunity","type":"exact"},{"name":"down-regulation of lymphocyte mediated immunity","type":"exact"},{"name":"downregulation of lymphocyte mediated immunity","type":"exact"},{"name":"inhibition of lymphocyte mediated immunity","type":"narrow"}],"termid":"GO:0002707"}


id: GO:0045544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 2-oxoglutarate + gibberellin A12 (GA12) + H+ + 3 O2 = 3 CO2 + gibberellin A9 (GA9) + 2 H2O + 2 succinate. This reaction results in the oxidation of C-20 gibberellins to form the corresponding C-19 lactones, via a three-step oxidation at C-20 of the GA skeleton. Also converts GA53 to GA20. GA25 is also formed as a minor product.","definition_xrefs":["PMID:32652020","PMID:7604047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gibberellin 20-oxidase activity","termid":"GO:0045544"}


id: PBO:0081912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 879","termid":"PBO:0081912"}


id: MONDO:0018794
data:
  {"annotated_genes":["SJAG_02093","SJAG_03204","SJAG_02091"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86448,86449,86450],"is_not":false,"summary":null,"term":"MONDO:0018794"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02091":null,"SJAG_02093":null,"SJAG_03204":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004335"],"is_obsolete":false,"name":"cytosolic phospholipase-A2 alpha deficiency associated bleeding disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17857","OMIM:618372","UMLS:C5567651","Orphanet:477787","MEDGEN:1799074"],"synonyms":[{"name":"GASTROINTESTINAL ULCERATION, RECURRENT, WITH DYSFUNCTIONAL PLATELETS","type":"related"},{"name":"GURDP","type":"related"},{"name":"PLA2G4A-related platelet dysfunction","type":"exact"},{"name":"Phospholipase A2, Group Iva, Deficiency of","type":"related"},{"name":"cytosolic phospholipase-A2 alpha deficiency associated bleeding disorder","type":"exact"},{"name":"platelet dysfunction due to cytosolic phospholipase-A2 alpha deficiency","type":"exact"}],"termid":"MONDO:0018794","terms_by_termid":{"MONDO:0018794":null},"xrefs":{"Monarch":{"xref_id":"0018794"}}}


id: PBO:0071449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 55","termid":"PBO:0071449"}


id: PBO:0056738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl aminopeptidase type 1D, mitochondrial","termid":"PBO:0056738"}


id: PBO:0085659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mRNA splicing; contains a consensus nuclear export signal (NES) sequence similar to the consensus sequence recognized by Crm1p; interacts genetically with Prp40p and Tgs1p; contains WD40 repeats","termid":"PBO:0085659"}


id: PBO:0061689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 188","termid":"PBO:0061689"}


id: MONDO:0005409
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete variant Creutzfeld Jacob disease (obsolete MONDO:0005409)","termid":"MONDO:0005409","xrefs":{"Monarch":{"xref_id":"0005409"}}}


id: PBO:0041763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 2","termid":"PBO:0041763"}


id: PBO:0065155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 5 pseudogene 1","termid":"PBO:0065155"}


id: PBO:0051103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-14 (pseudogene)","termid":"PBO:0051103"}


id: PBO:0046283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 2","termid":"PBO:0046283"}


id: GO:0018590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: methylsilanetriol + O2 + 2 H+ + 2 e- = H2O + hydroxymethylsilanetriol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete methylsilanetriol hydroxylase activity (obsolete GO:0018590)","termid":"GO:0018590"}


id: PBO:0052397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member C3","termid":"PBO:0052397"}


id: GO:0015962
data:
  {"annotated_genes":["SJAG_04939","SJAG_04169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117481,111826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015964"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving diadenosine triphosphate, a derivative of the nucleoside adenosine with three phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04169":null,"SJAG_04939":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"diadenosine triphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine triphosphate metabolism","type":"exact"}],"termid":"GO:0015962","terms_by_termid":{"GO:0015964":null}}


id: PATO:0000785
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000785 muscle function value (obsolete PATO:0000785)","termid":"PATO:0000785"}


id: MONDO:0019447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atypical lichen myxedematosus is an intermediate form of lichen myxedematosus (LM) (a form of mucin dermal deposit) which does not meet the criteria for either scleromyxedema or the localized form. Three clinical subtypes have been described and include scleromyxedema without monoclonal gammopathy; localized forms with monoclonal gammopathy and/or systemic symptoms; localized forms with mixed features of the 5 subtypes of localized LM (discrete form, acral persistent papular mucinosis, self-healing papular mucinosis, papular mucinosis of infancy, and a pure nodular form). The course of atypical LM is unpredictable because only a few cases have been reported.","definition_xrefs":["Orphanet:86797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen myxedematosus","termid":"MONDO:0018432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"atypical lichen myxedematosus","secondary_identifiers":["SCTID:725148000","GARD:19066","UMLS:C4510874","MEDGEN:1383234"],"synonyms":[{"name":"Intermediate lichen myxedematosus","type":"exact"}],"termid":"MONDO:0019447","xrefs":{"Monarch":{"xref_id":"0019447"}}}


id: GO:0036463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the ligand TRAIL (tumor necrosis factor-related apoptosis-inducing ligand) and transmitting the signal from one side of the plasma membrane to the other to initiate apoptotic cell death.","definition_xrefs":["GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death receptor activity","termid":"GO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"TRAIL receptor activity","synonyms":[{"name":"tumor necrosis factor-related apoptosis-inducing ligand receptor","type":"exact"}],"termid":"GO:0036463"}


id: GO:0009944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the establishment of polarity along the adaxial/abaxial axis. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"adaxial/abaxial axis specification","termid":"GO:0009943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polarity specification of adaxial/abaxial axis","termid":"GO:0009944"}


id: PR:O13777
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- saf5 gene.","definition_xrefs":["UniProtKB:O13777","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1610.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1610.01","synonyms":[{"name":"Spom972h-saf5","type":"exact"}],"termid":"PR:O13777"}


id: PBO:0067513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 654, pseudogene","termid":"PBO:0067513"}


id: GO:0062176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A DNA metabolic process that results in the disassembly of R-loops. R-loops are three-stranded nucleic acid structures consisitng of an RNA:DNA heteroduplex and a looped-out non-template strand. Aberrant formation and persistence of R-loops block transcription elongation and cause DNA damage. Mechanisms that resolve R-loops are essential for genome stability.","definition_xrefs":["PMID:33986538","PMID:27252122","PMID:28790157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"R-loop processing","synonyms":[{"name":"R-loop disassembly","type":"exact"}],"termid":"GO:0062176"}


id: PBO:0068053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 358","termid":"PBO:0068053"}


id: PBO:0028228
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_trehalose_level_during_cellular_response_to_oxidative_stress","termid":"PBO:0028228"}


id: GO:0090392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sepal giant cell. A sepal giant cell is a pavement cell that is part of the sepal epidermis and stretches one fifth the length of the sepal with a chromosome content of 16C.","definition_xrefs":["GOC:tb","PMID:20485493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal giant cell differentiation","termid":"GO:0090392"}


id: GO:0047919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + H2O + 2 NAD+ = GDP-D-mannuronate + 3 H+ + 2 NADH.","definition_xrefs":["RHEA:21728","EC:1.1.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"GDP-mannose 6-dehydrogenase activity","secondary_identifiers":["MetaCyc:GDP-MANNOSE-6-DEHYDROGENASE-RXN","KEGG_REACTION:R00880"],"synonyms":[{"name":"GDP mannose dehydrogenase activity","type":"related"},{"name":"GDP-D-mannose:NAD+ 6-oxidoreductase activity","type":"related"},{"name":"GDPmannose 6-dehydrogenase activity","type":"related"},{"name":"guanosine diphospho-D-mannose dehydrogenase activity","type":"related"},{"name":"guanosine diphosphomannose dehydrogenase activity","type":"related"}],"termid":"GO:0047919"}


id: PBO:0062748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily J member 3","termid":"PBO:0062748"}


id: GO:0160168
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=9 symmetry. The T=9 capsid is composed of 12 pentameric and 80 hexameric capsomeres.","definition_xrefs":["PMID:37138077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=9 icosahedral viral capsid","secondary_identifiers":["VZ:5316"],"termid":"GO:0160168"}


id: FYPO:0000111
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to rapamycin. Cells stop growing (and may die) at a concentration of rapamycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to rapamycin","synonyms":[{"name":"hypersensitive to rapamycin","type":"exact"},{"name":"sensitive to rapamycin during mitotic cell cycle","type":"related"},{"name":"sensitive to rapamycin during vegetative growth","type":"exact"}],"termid":"FYPO:0000111"}


id: MONDO:0000734
data:
  {"annotated_genes":["SJAG_00156","SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010477"},{"annotations":[86866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011365"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharophimosis - intellectual disability syndrome","termid":"MONDO:0017393"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_02165":null},"genotype_count":0,"is_obsolete":false,"name":"Ohdo syndrome and variants","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060289"],"synonyms":[{"name":"Ohdo blepharophimosis syndrome","type":"narrow"},{"name":"Ohdo syndrome","type":"related"}],"termid":"MONDO:0000734","terms_by_termid":{"MONDO:0010477":null,"MONDO:0011365":null},"xrefs":{"Monarch":{"xref_id":"0000734"}}}


id: PBO:0048393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 2 like 1","termid":"PBO:0048393"}


id: GO:0048746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process whose specific outcome is the progression of smooth muscle fiber over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_muscle","GOC:dph","GOC:jid","GOC:lm"],"gene_count":0,"genotype_count":0,"name":"obsolete smooth muscle fiber development (obsolete GO:0048746)","synonyms":[{"name":"smooth muscle fiber development","type":"exact"},{"name":"smooth muscle fibre development","type":"exact"}],"termid":"GO:0048746"}


id: PBO:0042689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cat eye syndrome chromosome region, candidate 3","termid":"PBO:0042689"}


id: GO:0030016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The contractile element of skeletal and cardiac muscle; a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractile muscle fiber","termid":"GO:0043292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"myofibril","secondary_identifiers":["Wikipedia:Myofibril"],"termid":"GO:0030016"}


id: PBO:0117414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 9","termid":"PBO:0117414"}


id: GO:0052775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: R1-L-rhamnose-(1->3)-alpha-L-rhamnose-R2 + H2O = R1-L-rhamnose + L-rhamnose-R2. This reaction is the hydrolysis of an alpha-(1->3) linkage between two rhamnose residues in a polysaccharide chain.","definition_xrefs":["GOC:mengo_curators","PMID:10439404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"endo-1,3-alpha-L-rhamnosidase activity","synonyms":[{"name":"endo-(1,3)-alpha-L-rhamnosidase activity","type":"exact"},{"name":"endo-(1->3)-alpha-L-rhamnosidase activity","type":"exact"},{"name":"endorhamnosidase activity","type":"broad"}],"termid":"GO:0052775"}


id: PBO:0068274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 11 (inactive)","termid":"PBO:0068274"}


id: PBO:0057075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 154","termid":"PBO:0057075"}


id: PBO:0072799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 4 pseudogene 5","termid":"PBO:0072799"}


id: GO:0040021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of sex and sexual phenotype in the germ line of a hermaphrodite.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line sex determination","termid":"GO:0018992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hermaphrodite germ-line sex determination","secondary_identifiers":["GO:0042005"],"termid":"GO:0040021"}


id: MONDO:0002961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acanthoma","termid":"MONDO:0002093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"large cell acanthoma","secondary_identifiers":["NCIT:C27518","MEDGEN:235249","UMLS:C1334362","DOID:4321"],"termid":"MONDO:0002961","xrefs":{"Monarch":{"xref_id":"0002961"}}}


id: GO:0022018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of lateral ganglionic eminence cells, resulting in the expansion of the cell population.","definition_xrefs":["GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral ganglionic eminence cell proliferation","termid":"GO:0022018"}


id: PBO:0000624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA methyltransferase Tgs1 (predicted)","termid":"PBO:0000624"}


id: GO:1903588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of blood vessel endothelial cell proliferation involved in sprouting angiogenesis.","definition_xrefs":["GO_REF:0000058","PMID:23388056","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endothelial cell proliferation","termid":"GO:0001937"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:1903587"},{"relation_name":"negatively_regulates","term_name":"blood vessel endothelial cell proliferation involved in sprouting angiogenesis","termid":"GO:0002043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","synonyms":[{"name":"down regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"down regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"down-regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"down-regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"downregulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"downregulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"exact"},{"name":"inhibition of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"},{"name":"inhibition of blood vessel endothelial cell proliferation involved in sprouting angiogenesis","type":"narrow"},{"name":"negative regulation of blood vessel endothelial cell proliferation during sprouting angiogenesis","type":"related"}],"termid":"GO:1903588"}


id: MONDO:0013873
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"IMAGe syndrome is characterized by the association of intrauterine growth retardation, metaphyseal dysplasia (and short limbs), adrenal hypoplasia congenita, and genital anomalies. It has been described in less than 20 cases. The patients also present with dysmorphic features (frontal bossing, broad nasal bridge, low-set ears). In boys, genital anomalies include bilateral cryptorchidism, hypospadias, micropenis, and hypogonadotropic hypogonadism. This syndrome is likely to be transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:85173"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"adrenal gland disorder","termid":"MONDO:0005495"},{"relation_name":"excluded_subClassOf","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic urogenital tract malformation (obsolete MONDO:0015620)","termid":"MONDO:0015620"},{"relation_name":"excluded_subClassOf","term_name":"obsolete slender bone dysplasia (obsolete MONDO:0019699)","termid":"MONDO:0019699"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMAGe syndrome","secondary_identifiers":["NANDO:1200406","OMIM:614732","SCTID:702384004","UMLS:C1846009","icd11.foundation:1064803315","DOID:0050885","GARD:12312","NCIT:C130988","ICD9:759.89","MEDGEN:337364"],"synonyms":[{"name":"IMAGe syndrome","type":"exact"},{"name":"intrauterine growth restriction, metaphyseal dysplasia, adrenal hypoplasia congenita, genital abnormalities","type":"exact"},{"name":"intrauterine growth retardation - metaphyseal dysplasia - adrenal hypoplasia congenita - genital anomalies","type":"related"},{"name":"intrauterine growth retardation, metaphyseal dysplasia, adrenal hypoplasia congenita, and genital anomalies","type":"related"},{"name":"intrauterine growth retardation-metaphyseal dysplasia-adrenal hypoplasia congenita-genital anomalies syndrome","type":"exact"}],"termid":"MONDO:0013873","xrefs":{"Monarch":{"xref_id":"0013873"}}}


id: PBO:0017644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory complex assembly protein Mba1 (predicted)","termid":"PBO:0017644"}


id: MONDO:0030543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 54","secondary_identifiers":["OMIM:619737","UMLS:C5676912","MEDGEN:1812715","DOID:0070427"],"synonyms":[{"name":"COXPD54","type":"exact"}],"termid":"MONDO:0030543","xrefs":{"Monarch":{"xref_id":"0030543"}}}


id: PBO:0070850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 2","termid":"PBO:0070850"}


id: GO:0000429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one carbon source leads to the modulation of the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other carbon sources.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase II","termid":"GO:0006357"},{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription","termid":"GO:0045990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006355","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"carbon catabolite regulation of transcription from RNA polymerase II promoter","synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter by carbon catabolites","type":"exact"}],"termid":"GO:0000429"}


id: GO:0042922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to one or more specific sites on a neuromedin U receptor.","definition_xrefs":["GOC:jl","PMID:10899166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"neuromedin U receptor binding","termid":"GO:0042922"}


id: FYPO:0006038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which the initiation of translation in the cytoplasm is normal (i.e. indistinguishable from wild type). Translational initiation is he process preceding formation of the peptide bond between the first two amino acids of a protein in the cytoplasm.","definition_xrefs":["GO:0002183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation phenotype","termid":"FYPO:0000291"},{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cytoplasmic translational initiation","synonyms":[{"name":"normal cytoplasmic translation initiation","type":"exact"},{"name":"normal cytoplasmic translational initiation during mitotic cell cycle","type":"related"},{"name":"normal cytoplasmic translational initiation during vegetative growth","type":"exact"}],"termid":"FYPO:0006038"}


id: MOD:00191
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts L-tyrosine to (Z)-2,3-didehydrotyrosine.","definition_xrefs":["RESID:AA0183","PubMed:1347277","PubMed:9631087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehydrogenated tyrosine","termid":"MOD:00706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(Z)-2,3-didehydrotyrosine","synonyms":[{"name":"(2Z)-2-amino-3-(4-hydroxyphenyl)prop-2-enoic acid","type":"exact"},{"name":"(Z)-2,3-didehydrogenated tyrosine","type":"exact"},{"name":"(Z)-2,3-didehydrotyrosine","type":"exact"},{"name":"2-amino-3-oxo-butanoic_acid","type":"related"},{"name":"Didehydro","type":"related"},{"name":"MOD_RES (Z)-2,3-didehydrotyrosine","type":"exact"},{"name":"Z-dHTyr","type":"exact"},{"name":"amino-(para-hydroxybenzylidenyl)acetic acid","type":"exact"},{"name":"cis-dehydrotyrosine","type":"exact"},{"name":"green fluorescent protein chromophore","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"},{"name":"red fluorescent protein chromophore","type":"exact"}],"termid":"MOD:00191"}


id: PBO:0085094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear export factor for the ribosomal pre-60S subunit; shuttling factor which directly binds FG rich nucleoporins and facilities translocation through the nuclear pore complex; interacts directly with Alb1p; responsible for Tif6p recycling defects in the absence of Rei1; associated with the ribosomal export complex","termid":"PBO:0085094"}


id: GO:0042459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of octopine into other compounds, including proline.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete octopine catabolic process to proline (obsolete GO:0042459)","synonyms":[{"name":"octopine breakdown to proline","type":"exact"},{"name":"octopine degradation to proline","type":"exact"}],"termid":"GO:0042459"}


id: FYPO:0000672
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype characterized by normal cell morphology (i.e. size, shape, and structure).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell morphology","synonyms":[{"name":"cellular morphology: normal","type":"related"}],"termid":"FYPO:0000672"}


id: MONDO:0009899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhydramnios, chronic idiopathic","secondary_identifiers":["MEDGEN:340402","UMLS:C1849720","OMIM:263610","MESH:C564876"],"synonyms":[{"name":"Lactogen receptor defect of chorion","type":"related"},{"name":"polyhydramnios, chronic idiopathic","type":"exact"}],"termid":"MONDO:0009899","xrefs":{"Monarch":{"xref_id":"0009899"}}}


id: PBO:0041079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRICK1 subunit of SCAR/WAVE actin nucleating complex","termid":"PBO:0041079"}


id: PR:O42918
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu7 gene.","definition_xrefs":["UniProtKB:O42918","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.13","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-meu7","type":"exact"},{"name":"meiotic expression up-regulated protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42918"}


id: PBO:0050686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 13","termid":"PBO:0050686"}


id: GO:0035301
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex that binds microtubules in a Hedgehog-dependent manner, and is required for signal transduction by members of the Hedgehog family of proteins. The core components of the complex are the serine/threonine protein kinase Fused, the kinesin motor protein Costal2 (Cos2), and a zinc finger transcription factor (Gli family members in humans, and Cubitus interruptus (Ci) in Drosophila).","definition_xrefs":["PMID:10825151","PMID:15057936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Hedgehog signaling complex","synonyms":[{"name":"HSC","type":"exact"},{"name":"Hedgehog signalling complex","type":"exact"}],"termid":"GO:0035301"}


id: GO:2000254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of male germ cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of germ cell proliferation","termid":"GO:1905936"},{"relation_name":"regulates","term_name":"male germ cell proliferation","termid":"GO:0002176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of male germ cell proliferation","termid":"GO:2000254"}


id: MONDO:0008971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Pyle disease","termid":"MONDO:0009943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"chondrodysplasia calcificans Metaphysealis","secondary_identifiers":["MEDGEN:347809","GARD:10613","OMIM:215050","MESH:C565855","UMLS:C1859147"],"synonyms":[{"name":"chondrodysplasia calcificans Metaphysealis","type":"exact"}],"termid":"MONDO:0008971","xrefs":{"Monarch":{"xref_id":"0008971"}}}


id: FYPO:0008175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of oxygen consumed by cells in a given time is normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal oxygen consumption","termid":"FYPO:0008175"}


id: PBO:0048195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABPB1 intronic transcript","termid":"PBO:0048195"}


id: FYPO:0000357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the mating projection is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000301"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000301","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal shmoo morphology","synonyms":[{"name":"abnormal conjugation tube morphology","type":"exact"},{"name":"abnormal mating projection morphology","type":"exact"},{"name":"mating projection morphology: abnormal","type":"related"}],"termid":"FYPO:0000357"}


id: GO:1901094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein homotetramerization.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein homooligomerization","termid":"GO:0032463"},{"relation_name":"is_a","term_name":"negative regulation of protein tetramerization","termid":"GO:1901091"},{"relation_name":"is_a","term_name":"regulation of protein homotetramerization","termid":"GO:1901093"},{"relation_name":"negatively_regulates","term_name":"protein homotetramerization","termid":"GO:0051289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of protein homotetramerization","synonyms":[{"name":"down regulation of protein homotetramer assembly","type":"exact"},{"name":"down regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"down regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"down regulation of protein homotetramer formation","type":"exact"},{"name":"down regulation of protein homotetramerization","type":"exact"},{"name":"down-regulation of protein homotetramer assembly","type":"exact"},{"name":"down-regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"down-regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"down-regulation of protein homotetramer formation","type":"exact"},{"name":"down-regulation of protein homotetramerization","type":"exact"},{"name":"downregulation of protein homotetramer assembly","type":"exact"},{"name":"downregulation of protein homotetramer biosynthesis","type":"exact"},{"name":"downregulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"downregulation of protein homotetramer formation","type":"exact"},{"name":"downregulation of protein homotetramerization","type":"exact"},{"name":"inhibition of protein homotetramer assembly","type":"narrow"},{"name":"inhibition of protein homotetramer biosynthesis","type":"narrow"},{"name":"inhibition of protein homotetramer biosynthetic process","type":"narrow"},{"name":"inhibition of protein homotetramer formation","type":"narrow"},{"name":"inhibition of protein homotetramerization","type":"narrow"},{"name":"negative regulation of protein homotetramer assembly","type":"exact"},{"name":"negative regulation of protein homotetramer biosynthesis","type":"exact"},{"name":"negative regulation of protein homotetramer biosynthetic process","type":"exact"},{"name":"negative regulation of protein homotetramer formation","type":"exact"}],"termid":"GO:1901094"}


id: MONDO:0100112
data:
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id: PBO:0016549
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id: PBO:0049657
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id: PBO:0060219
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAX dimerization protein 1","termid":"PBO:0060219"}


id: PBO:0052752
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id: PBO:0070126
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 40 pseudogene","termid":"PBO:0070126"}


id: GO:0062245
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id: GO:0055039
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id: GO:0110067
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id: PBO:0069160
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id: GO:0046108
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id: GO:0009893
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id: SO:0000289
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id: PBO:0079981
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id: PBO:0066618
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id: PBO:0086206
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id: MOD:02042
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id: GO:0002564
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id: PBO:0046700
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id: GO:0019408
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id: GO:1900495
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id: PBO:0011423
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id: GO:0090024
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id: PBO:0054768
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id: MONDO:0001427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dieulafoy lesion is an abnormally large artery (a vessel that takes blood from the heart to other areas of the body) in the lining of the gastrointestinal system. It is most common in the stomach but can occur in other locations, including the small and large intestine. Dieulafoy lesions can cause severe and sudden gastrointestinal bleeding. The condition occurs in people of all ages, but is more common in males than in females.Depending upon the site of the bleeding, symptoms may include vomiting up blood (hematemesis); sticky, dark-colored stools (melena); passage of fresh blood in the stool (hematochezia); or coughing up blood (hemoptysis). Some affected individuals may only present with blood pressure problems. Treatment may include endoscopic and/or surgical techniques. Though treatment can be effective, Dieulafoy lesions and the associated blood loss can be fatal, especially if not diagnosed and treated promptly.","direct_ancestors":[{"relation_name":"is_a","term_name":"stomach disorder","termid":"MONDO:0004298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Dieulafoy lesion","secondary_identifiers":["UMLS:C0341217","DOID:12070","SCTID:109558001","ICD10CM:K31.82","ICD9:537.84","MEDGEN:574250"],"synonyms":[{"name":"Dieulafoy disease","type":"related"},{"name":"Dieulafoy lesion (hemorrhagic) of intestine","type":"exact"},{"name":"Dieulafoy lesion (hemorrhagic) of stomach and duodenum","type":"exact"},{"name":"Dieulafoy's lesion","type":"related"},{"name":"Exulceratio simplex Dieulafoy","type":"related"}],"termid":"MONDO:0001427","xrefs":{"Monarch":{"xref_id":"0001427"}}}


id: GO:0042688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a hemocyte precursor cell acquires the characteristics of a crystal cell, a class of cells that contain crystalline inclusions and are involved in the melanization of pathogenic material in the hemolymph.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"crystal cell differentiation","termid":"GO:0042688"}


id: RO:HOM0000034
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Orthology that involves two genes when duplications more recent than the species split have occurred in one species but not the other.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_orthology_relationship_with","termid":"RO:HOM0000017"},{"relation_name":"is_a","term_name":"in_1_to_many_homology_relationship_with","termid":"RO:HOM0000037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_1_to_many_orthology_relationship_with","synonyms":[{"name":"1 to many orthologous to","type":"exact"},{"name":"1:many orthology","type":"exact"},{"name":"co-orthology","type":"related"},{"name":"many to 1 orthology","type":"related"},{"name":"one-to-many orthology","type":"exact"}],"termid":"RO:HOM0000034"}


id: MONDO:0018071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trisomy 18 is a chromosomal abnormality associated with the presence of an extra chromosome 18 and characterized by growth delay, dolichocephaly, a characteristic facies, limb anomalies and visceral malformations.","definition_xrefs":["Orphanet:3380"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow hypertrophy (obsolete MONDO:0020186)","termid":"MONDO:0020186"},{"relation_name":"excluded_subClassOf","term_name":"obsolete eyebrow/eyelashes distichiasis (obsolete MONDO:0020190)","termid":"MONDO:0020190"},{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"},{"relation_name":"is_a","term_name":"chromosome 18 disorder","termid":"MONDO:0700125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trisomy 18","secondary_identifiers":["SCTID:51500006","UMLS:C4317091","ICD9:758.2","DOID:1085","MEDGEN:1384417","MESH:C580500","NORD:1797","NCIT:C36626","GARD:6321","MedDRA:10053884","icd11.foundation:1505179968","NANDO:2200963"],"synonyms":[{"name":"18 trisomy","type":"related"},{"name":"E3 trisomy","type":"exact"},{"name":"Edwards syndrome","type":"exact"},{"name":"chromosome 18 duplication","type":"exact"},{"name":"chromosome 18 trisomy","type":"related"},{"name":"complete trisomy 18 syndrome","type":"exact"},{"name":"trisomy 16-18 (formerly)","type":"related"},{"name":"trisomy 18","type":"exact"},{"name":"trisomy E (formerly)","type":"related"},{"name":"trisomy type 18","type":"exact"}],"termid":"MONDO:0018071","xrefs":{"Monarch":{"xref_id":"0018071"}}}


id: PBO:0041391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 60","termid":"PBO:0041391"}


id: GO:0043306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mast cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte degranulation","termid":"GO:0043302"},{"relation_name":"is_a","term_name":"regulation of mast cell degranulation","termid":"GO:0043304"},{"relation_name":"positively_regulates","term_name":"mast cell degranulation","termid":"GO:0043303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell degranulation","synonyms":[{"name":"activation of mast cell degranulation","type":"narrow"},{"name":"positive regulation of mast cell granule exocytosis","type":"exact"},{"name":"stimulation of mast cell degranulation","type":"narrow"},{"name":"up regulation of mast cell degranulation","type":"exact"},{"name":"up-regulation of mast cell degranulation","type":"exact"},{"name":"upregulation of mast cell degranulation","type":"exact"}],"termid":"GO:0043306"}


id: PBO:0075282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 22","termid":"PBO:0075282"}


id: FYPO:0005793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is bent along the long axis. In a bent cell, the long axis has one or more angles, rather than following a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"bent cell","synonyms":[{"name":"cell morphology, bent","type":"exact"}],"termid":"FYPO:0005793"}


id: PBO:0038411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-term_tracker_item","termid":"PBO:0038411"}


id: MONDO:1011813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoid, non-human animal","secondary_identifiers":["OMIA:000888"],"termid":"MONDO:1011813","xrefs":{"Monarch":{"xref_id":"1011813"}}}


id: PBO:0075580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 4","termid":"PBO:0075580"}


id: GO:0014073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tropane stimulus. Tropane is a nitrogenous bicyclic organic compound mainly known for a group of alkaloids derived from it (called tropane alkaloids), which include, among others, atropine and cocaine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tropane","termid":"GO:0014073"}


id: PBO:0046536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group 9 member 1","termid":"PBO:0046536"}


id: PBO:0084445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltose permease; part of the complex locus MAL4","termid":"PBO:0084445"}


id: MONDO:0043300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cheilitis","termid":"MONDO:0002102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinic cheilitis","secondary_identifiers":["MESH:C535669","NCIT:C183562","SCTID:46795000","UMLS:C0267026","icd11.foundation:436658980","MEDGEN:75625"],"synonyms":[{"name":"actinic cheilitis","type":"exact"},{"name":"actinic cheilosis","type":"related"},{"name":"solar keratosis of lip","type":"related"}],"termid":"MONDO:0043300","xrefs":{"Monarch":{"xref_id":"0043300"}}}


id: MONDO:1012045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar cortical atrophy, non-human animal","termid":"MONDO:1011836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar cortical atrophy, dog","secondary_identifiers":["OMIA:000177-9615"],"termid":"MONDO:1012045","xrefs":{"Monarch":{"xref_id":"1012045"}}}


id: GO:0006304
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045007"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more nucleotide sites in DNA, resulting in a change in its properties.","definition_xrefs":["GOC:ma","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006304","terms_by_termid":{"GO:0045007":null}}


id: GO:1902176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an oxidative stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:11672522","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902175"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0008631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"narrow"},{"name":"negative regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1902176"}


id: GO:0044269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol ether metabolic process","termid":"GO:0006662"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycerol ether catabolic process","synonyms":[{"name":"glycerol ether breakdown","type":"exact"},{"name":"glycerol ether catabolism","type":"exact"},{"name":"glycerol ether degradation","type":"exact"}],"termid":"GO:0044269"}


