# genes

id: SJAG_01205
data:
  {"alleles_by_uniquename":{"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"}},"cv_annotations":{"biological_process":[{"annotations":[109685],"is_not":false,"summary":null,"term":"GO:0033314"},{"annotations":[109686],"is_not":false,"summary":null,"term":"GO:0007095"},{"annotations":[109687],"is_not":false,"summary":null,"term":"GO:0010569"}],"cellular_component":[{"annotations":[109680],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[109681],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[109682],"is_not":false,"summary":null,"term":"GO:0035861"}],"molecular_function":[{"annotations":[109689],"is_not":false,"summary":null,"term":"GO:0140172"},{"annotations":[109690],"is_not":false,"summary":null,"term":"GO:0140173"},{"annotations":[109691],"is_not":false,"summary":null,"term":"GO:0140005"}],"multi_locus_phenotype":[{"annotations":[119669],"is_not":false,"summary":null,"term":"FYPO:0000085"},{"annotations":[119666],"is_not":false,"summary":null,"term":"FYPO:0000088"}],"single_locus_phenotype":[{"annotations":[119658],"is_not":false,"summary":null,"term":"FYPO:0007782"},{"annotations":[119667],"is_not":false,"summary":null,"term":"FYPO:0000085"},{"annotations":[119664],"is_not":false,"summary":null,"term":"FYPO:0000088"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01205","InterPro:IPR036420","InterPro:IPR041297","EnsemblGenomes-Tr:EEB06166","InterPro:IPR001357","UniProtKB/TrEMBL:B6K016"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":98,"start":38}}],"feature_publications":[{"reference_uniquename":"PMID:23090706","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"slu7","uniquename":"SJAG_01200"},{"name":"nop6","uniquename":"SJAG_01201"},{"name":"rpl21a","uniquename":"SJAG_01202"},{"name":"rpn12","uniquename":"SJAG_01203"},{"name":"rtt109","uniquename":"SJAG_01204"},{"name":"crb2","uniquename":"SJAG_01205"},{"uniquename":"SJAG_01206"},{"name":"tfb5","uniquename":"SJAG_01207"},{"uniquename":"SJAG_06621"},{"uniquename":"SJAG_06622"},{"name":"pgm1","uniquename":"SJAG_01209"}],"genes_by_uniquename":{"HGNC:11999":null,"SJAG_01205":null,"SJAG_01680":null,"SPBC342.05":null,"YDR217C":null},"genotypes_by_uniquename":{"chk1delta__crb2delta":{"display_name":"chk1delta crb2delta","display_uniquename":"chk1delta__crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"BRCA1 C Terminus (BRCT) domain","id":"PF00533","interpro_description":"BRCT domain","interpro_id":"IPR001357","interpro_name":"BRCT_dom","locations":[{"end":487,"start":391}],"match_end":487,"match_start":391,"name":"BRCT"},{"dbname":"PFAM","description":"DNA repair protein Crb2 Tudor domain","id":"PF18115","interpro_description":"DNA repair protein Crb2, Tudor domain","interpro_id":"IPR041297","interpro_name":"Crb2_Tudor","locations":[{"end":269,"start":218}],"match_end":269,"match_start":218,"name":"Tudor_3"},{"dbname":"CDD","description":"BRCT_p53bp1_rpt1","id":"cd17745","interpro_description":"TP53-binding protein 1-like, first BRCT domain","interpro_id":"IPR047249","interpro_name":"BRCT_p53bp1-like_rpt1","locations":[{"end":488,"start":392}],"match_end":488,"match_start":392,"name":"BRCT_p53bp1_rpt1"},{"dbname":"PROSITE_PROFILES","description":"BRCT domain profile.","id":"PS50172","interpro_description":"BRCT domain","interpro_id":"IPR001357","interpro_name":"BRCT_dom","locations":[{"end":500,"start":388}],"match_end":500,"match_start":388,"name":"BRCT"},{"dbname":"SMART","id":"SM00292","interpro_description":"BRCT domain","interpro_id":"IPR001357","interpro_name":"BRCT_dom","locations":[{"end":490,"start":390}],"match_end":490,"match_start":390,"name":"BRCT_7"},{"dbname":"SUPERFAMILY","id":"SSF52113","interpro_description":"BRCT domain superfamily","interpro_id":"IPR036420","interpro_name":"BRCT_dom_sf","locations":[{"end":514,"start":389}],"match_end":514,"match_start":389,"name":"BRCT domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.10190","interpro_description":"BRCT domain superfamily","interpro_id":"IPR036420","interpro_name":"BRCT_dom_sf","locations":[{"end":529,"start":392}],"match_end":529,"match_start":392,"name":"BRCT domain"},{"dbname":"GENE3D","id":"G3DSA:2.30.30.140","locations":[{"end":269,"start":213}],"match_end":269,"match_start":213},{"dbname":"PANTHER","id":"PTHR15321","interpro_description":"TP53-binding protein 1-like","interpro_id":"IPR047252","interpro_name":"TP53BP1-like","locations":[{"end":625,"start":389}],"match_end":625,"match_start":389,"name":"TUMOR SUPPRESSOR P53-BINDING PROTEIN 1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":98,"start":38}],"match_end":98,"match_start":38,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":52,"start":42}],"match_end":52,"match_start":42,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1167414,"start_pos":1165510,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":193,"start":174}}],"name":"crb2","ortholog_annotations":[{"gene_uniquename":"SJAG_01205","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11999","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01205","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC342.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01205","ortholog_taxonid":4932,"ortholog_uniquename":"YDR217C","reference_uniquename":"PMID:29761456"}],"product":"BRCT and tudor domain DNA checkpoint protein Crb2","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:23090706":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0140172","GO:0140173","GO:0140005"]},"multi_locus_phenotype":{"population_phenotype":["FYPO:0000085","FYPO:0000088"]},"single_locus_phenotype":{"cell_phenotype":["FYPO:0007782"],"population_phenotype":["FYPO:0000085","FYPO:0000088"]}},"subset_termids":["GO:0005694","GO:0006281","FYPO:0002683","GO:0044772","GO:0005634","GO:0006310","GO:0060090","GO:0023052","FYPO:0000139"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0000085":null,"FYPO:0000088":null,"FYPO:0007782":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"GO:0000785":null,"GO:0005634":null,"GO:0007095":null,"GO:0010569":null,"GO:0033314":null,"GO:0035861":null,"GO:0140005":null,"GO:0140172":null,"GO:0140173":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01205.1"],"transcripts_by_uniquename":{"SJAG_01205.1":null},"uniprot_identifier":"B6K016","uniquename":"SJAG_01205"}


id: SJAG_01206
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109344],"is_not":false,"summary":null,"term":"GO:0006897"}],"cellular_component":[{"annotations":[109343],"is_not":false,"summary":null,"term":"GO:0000139"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06167","EnsemblGenomes-Gn:SJAG_01206","GOA:B6K017","InterPro:IPR019365","UniProtKB/TrEMBL:B6K017"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"nop6","uniquename":"SJAG_01201"},{"name":"rpl21a","uniquename":"SJAG_01202"},{"name":"rpn12","uniquename":"SJAG_01203"},{"name":"rtt109","uniquename":"SJAG_01204"},{"name":"crb2","uniquename":"SJAG_01205"},{"uniquename":"SJAG_01206"},{"name":"tfb5","uniquename":"SJAG_01207"},{"uniquename":"SJAG_06621"},{"uniquename":"SJAG_06622"},{"name":"pgm1","uniquename":"SJAG_01209"},{"name":"rum1","uniquename":"SJAG_01210"}],"genes_by_uniquename":{"HGNC:1365":null,"SJAG_01206":null,"SPBC32F12.12c":null,"YMR071C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Uncharacterized conserved protein CG6151-P","id":"PF10233","interpro_description":"TVP18/Calcium channel flower","interpro_id":"IPR019365","interpro_name":"TVP18/Ca-channel_flower","locations":[{"end":129,"start":19}],"match_end":129,"match_start":19,"name":"Cg6151-P"},{"dbname":"SMART","id":"SM01077","interpro_description":"TVP18/Calcium channel flower","interpro_id":"IPR019365","interpro_name":"TVP18/Ca-channel_flower","locations":[{"end":130,"start":19}],"match_end":130,"match_start":19,"name":"Cg6151_P_2"},{"dbname":"PANTHER","id":"PTHR13314","interpro_description":"TVP18/Calcium channel flower","interpro_id":"IPR019365","interpro_name":"TVP18/Ca-channel_flower","locations":[{"end":135,"start":5}],"match_end":135,"match_start":5,"name":"CALCIUM CHANNEL FLOWER HOMOLOG"}],"location":{"chromosome_name":"supercont5.3","end_pos":1169683,"start_pos":1168845,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":31,"start":18}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_01206","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1365","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01206","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC32F12.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01206","ortholog_taxonid":4932,"ortholog_uniquename":"YMR071C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01206","ortholog_taxonid":4932,"ortholog_uniquename":"YMR071C","reference_uniquename":"PMID:26896847"}],"product":"Golgi membrane protein involved in vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005794","GO:0016192"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000139":null,"GO:0006897":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":37,"start":15}},{"assigned_by":"TMHMM","range":{"end":64,"start":42}},{"assigned_by":"TMHMM","range":{"end":103,"start":84}},{"assigned_by":"TMHMM","range":{"end":130,"start":108}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01206.1"],"transcripts_by_uniquename":{"SJAG_01206.1":null},"uniprot_identifier":"B6K017","uniquename":"SJAG_01206"}


id: SJAG_01207
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109349],"is_not":false,"summary":null,"term":"GO:0006294"},{"annotations":[57562],"is_not":false,"summary":null,"term":"GO:0006367"}],"cellular_component":[{"annotations":[109345],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[57560],"is_not":false,"summary":null,"term":"GO:0000439"},{"annotations":[109348],"is_not":false,"summary":null,"term":"GO:0005675"}],"molecular_function":[{"annotations":[109351],"is_not":false,"summary":null,"term":"GO:0016251"}],"mondo":[{"annotations":[85629],"is_not":false,"summary":null,"term":"MONDO:0014619"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01207","InterPro:IPR009400","InterPro:IPR035935","UniProtKB/TrEMBL:B6K018","EnsemblGenomes-Tr:EEB06168","GOA:B6K018"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rpl21a","uniquename":"SJAG_01202"},{"name":"rpn12","uniquename":"SJAG_01203"},{"name":"rtt109","uniquename":"SJAG_01204"},{"name":"crb2","uniquename":"SJAG_01205"},{"uniquename":"SJAG_01206"},{"name":"tfb5","uniquename":"SJAG_01207"},{"uniquename":"SJAG_06621"},{"uniquename":"SJAG_06622"},{"name":"pgm1","uniquename":"SJAG_01209"},{"name":"rum1","uniquename":"SJAG_01210"},{"name":"duo1","uniquename":"SJAG_01211"}],"genes_by_uniquename":{"HGNC:21157":null,"SJAG_01207":null,"SPBC32F12.15":null,"YDR079C-A":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Transcription factor TFIIH complex subunit Tfb5","id":"PF06331","interpro_description":"TFIIH subunit TTDA/Tfb5","interpro_id":"IPR009400","interpro_name":"TFIIH_TTDA/Tfb5","locations":[{"end":65,"start":1}],"match_end":65,"match_start":1,"name":"Tfb5"},{"dbname":"SMART","id":"SM01395","interpro_description":"TFIIH subunit TTDA/Tfb5","interpro_id":"IPR009400","interpro_name":"TFIIH_TTDA/Tfb5","locations":[{"end":66,"start":1}],"match_end":66,"match_start":1,"name":"Tbf5_2"},{"dbname":"FUNFAM","description":"RNA polymerase II transcription factor B subunit 5","id":"G3DSA:3.30.70.1220:FF:000002","locations":[{"end":67,"start":2}],"match_end":67,"match_start":2},{"dbname":"SUPERFAMILY","id":"SSF142897","interpro_description":"TFB5-like superfamily","interpro_id":"IPR035935","interpro_name":"TFB5-like_sf","locations":[{"end":66,"start":9}],"match_end":66,"match_start":9,"name":"TFB5-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.1220","interpro_description":"TFB5-like superfamily","interpro_id":"IPR035935","interpro_name":"TFB5-like_sf","locations":[{"end":67,"start":1}],"match_end":67,"match_start":1},{"dbname":"PANTHER","id":"PTHR28580","interpro_description":"TFIIH subunit TTDA/Tfb5","interpro_id":"IPR009400","interpro_name":"TFIIH_TTDA/Tfb5","locations":[{"end":65,"start":1}],"match_end":65,"match_start":1,"name":"GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5"}],"location":{"chromosome_name":"supercont5.3","end_pos":1170028,"start_pos":1169822,"strand":"reverse"},"name":"tfb5","ortholog_annotations":[{"gene_uniquename":"SJAG_01207","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21157","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01207","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC32F12.15","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01207","ortholog_taxonid":4932,"ortholog_uniquename":"YDR079C-A","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01207","ortholog_taxonid":4932,"ortholog_uniquename":"YDR079C-A","reference_uniquename":"PMID:26896847"}],"product":"transcription factor TFIIH complex subunit Tfb5","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0016251"]}},"subset_termids":["GO:0006351","GO:0065003","GO:0006281","GO:0005829","MONDO:0021190","GO:0005654","MONDO:0005093","GO:0005634","MONDO:0005066","GO:0140223"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000439":null,"GO:0005675":null,"GO:0005829":null,"GO:0006294":null,"GO:0006367":null,"GO:0016251":null,"MONDO:0014619":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01207.1"],"transcripts_by_uniquename":{"SJAG_01207.1":null},"uniprot_identifier":"B6K018","uniquename":"SJAG_01207"}


id: SJAG_01209
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109268],"is_not":false,"summary":null,"term":"GO:0051156"},{"annotations":[109269],"is_not":false,"summary":null,"term":"GO:0005992"},{"annotations":[109270],"is_not":false,"summary":null,"term":"GO:0006011"}],"cellular_component":[{"annotations":[76945],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[109267],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[65328],"is_not":false,"summary":null,"term":"GO:0000287"},{"annotations":[76946],"is_not":false,"summary":null,"term":"GO:0004614"}],"mondo":[{"annotations":[87524],"is_not":false,"summary":null,"term":"MONDO:0013968"}]},"dbxrefs":["InterPro:IPR005841","EnsemblGenomes-Gn:SJAG_01209","InterPro:IPR005843","EnsemblGenomes-Tr:EEB06170","InterPro:IPR016055","UniProtKB/TrEMBL:B6K020","InterPro:IPR005845","InterPro:IPR016066","GOA:B6K020","InterPro:IPR005846","InterPro:IPR036900","InterPro:IPR005844"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"crb2","uniquename":"SJAG_01205"},{"uniquename":"SJAG_01206"},{"name":"tfb5","uniquename":"SJAG_01207"},{"uniquename":"SJAG_06621"},{"uniquename":"SJAG_06622"},{"name":"pgm1","uniquename":"SJAG_01209"},{"name":"rum1","uniquename":"SJAG_01210"},{"name":"duo1","uniquename":"SJAG_01211"},{"uniquename":"SJAG_01212"},{"name":"pch1","uniquename":"SJAG_01213"},{"name":"cwf12","uniquename":"SJAG_01214"}],"genes_by_uniquename":{"HGNC:8905":null,"HGNC:8908":null,"SJAG_01209":null,"SPBC32F12.10":null,"YKL127W":null,"YMR105C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I","id":"PF02878","interpro_description":"Alpha-D-phosphohexomutase, alpha/beta/alpha domain I","interpro_id":"IPR005844","interpro_name":"A-D-PHexomutase_a/b/a-I","locations":[{"end":155,"start":15}],"match_end":155,"match_start":15,"name":"PGM_PMM_I"},{"dbname":"PFAM","description":"Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III","id":"PF02880","interpro_description":"Alpha-D-phosphohexomutase, alpha/beta/alpha domain III","interpro_id":"IPR005846","interpro_name":"A-D-PHexomutase_a/b/a-III","locations":[{"end":396,"start":318}],"match_end":396,"match_start":318,"name":"PGM_PMM_III"},{"dbname":"PFAM","description":"Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II","id":"PF02879","interpro_description":"Alpha-D-phosphohexomutase, alpha/beta/alpha domain II","interpro_id":"IPR005845","interpro_name":"A-D-PHexomutase_a/b/a-II","locations":[{"end":289,"start":185}],"match_end":289,"match_start":185,"name":"PGM_PMM_II"},{"dbname":"PFAM","description":"Phosphoglucomutase-1, C-terminal domain","id":"PF24947","locations":[{"end":554,"start":420}],"match_end":554,"match_start":420,"name":"PGM1_C_vert_fung"},{"dbname":"CDD","description":"PGM1","id":"cd03085","locations":[{"end":557,"start":5}],"match_end":557,"match_start":5,"name":"PGM1"},{"dbname":"PROSITE_PATTERNS","description":"Phosphoglucomutase and phosphomannomutase phosphoserine signature.","id":"PS00710","interpro_description":"Alpha-D-phosphohexomutase, conserved site","interpro_id":"IPR016066","interpro_name":"A-D-PHexomutase_CS","locations":[{"end":118,"start":109}],"match_end":118,"match_start":109,"name":"PGM_PMM"},{"dbname":"PRINTS","description":"Phosphoglucomutase/phosphomannomutase family signature","id":"PR00509","interpro_description":"Alpha-D-phosphohexomutase superfamily","interpro_id":"IPR005841","interpro_name":"Alpha-D-phosphohexomutase_SF","locations":[{"end":122,"start":108},{"end":228,"start":209},{"end":258,"start":245},{"end":288,"start":273}],"match_end":288,"match_start":108,"name":"PGMPMM"},{"dbname":"FUNFAM","description":"Phosphoglucomutase 5","id":"G3DSA:3.40.120.10:FF:000005","locations":[{"end":190,"start":3}],"match_end":190,"match_start":3},{"dbname":"FUNFAM","description":"Phosphoglucomutase 5","id":"G3DSA:3.30.310.50:FF:000002","locations":[{"end":557,"start":401}],"match_end":557,"match_start":401},{"dbname":"FUNFAM","description":"Phosphoglucomutase PgmA","id":"G3DSA:3.40.120.10:FF:000006","locations":[{"end":392,"start":294}],"match_end":392,"match_start":294},{"dbname":"FUNFAM","description":"Phosphoglucomutase 5","id":"G3DSA:3.40.120.10:FF:000004","locations":[{"end":293,"start":191}],"match_end":293,"match_start":191},{"dbname":"SUPERFAMILY","id":"SSF53738","interpro_description":"Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III","interpro_id":"IPR016055","interpro_name":"A-D-PHexomutase_a/b/a-I/II/III","locations":[{"end":425,"start":3}],"match_end":425,"match_start":3,"name":"Phosphoglucomutase, first 3 domains"},{"dbname":"SUPERFAMILY","id":"SSF55957","interpro_description":"Alpha-D-phosphohexomutase, C-terminal domain superfamily","interpro_id":"IPR036900","interpro_name":"A-D-PHexomutase_C_sf","locations":[{"end":557,"start":420}],"match_end":557,"match_start":420,"name":"Phosphoglucomutase, C-terminal domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.120.10","locations":[{"end":392,"start":3}],"match_end":392,"match_start":3},{"dbname":"GENE3D","id":"G3DSA:3.30.310.50","locations":[{"end":557,"start":402}],"match_end":557,"match_start":402},{"dbname":"PANTHER","id":"PTHR22573","interpro_description":"Phosphoglucomutase","interpro_id":"IPR045244","interpro_name":"PGM","locations":[{"end":557,"start":4}],"match_end":557,"match_start":4,"name":"PHOSPHOHEXOMUTASE FAMILY MEMBER"},{"dbname":"NCBIFAM","description":"alpha-D-glucose phosphate-specific phosphoglucomutase","id":"NF005737","locations":[{"end":557,"start":4}],"match_end":557,"match_start":4,"name":"PRK07564.1-1"}],"location":{"chromosome_name":"supercont5.3","end_pos":1175381,"start_pos":1173708,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":81,"start":67}}],"name":"pgm1","ortholog_annotations":[{"gene_uniquename":"SJAG_01209","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8905","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01209","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:8908","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01209","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC32F12.10","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01209","ortholog_taxonid":4932,"ortholog_uniquename":"YKL127W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01209","ortholog_taxonid":4932,"ortholog_uniquename":"YMR105C","reference_uniquename":"PMID:29761456"}],"product":"phosphoglucomutase Pgm1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000287"],"not-binding":["GO:0004614"]}},"subset_termids":["GO:0005829","GO:0005634","GO:0005975","GO:0016853","MONDO:0005267","MONDO:0005066","MONDO:0024322","GO:0055086"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000287":null,"GO:0004614":null,"GO:0005634":null,"GO:0005829":null,"GO:0005992":null,"GO:0006011":null,"GO:0051156":null,"MONDO:0013968":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01209.1"],"transcripts_by_uniquename":{"SJAG_01209.1":null},"uniprot_identifier":"B6K020","uniquename":"SJAG_01209"}


id: SJAG_01210
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109258],"is_not":false,"summary":null,"term":"GO:0031568"},{"annotations":[109262],"is_not":false,"summary":null,"term":"GO:1903467"},{"annotations":[109263],"is_not":false,"summary":null,"term":"GO:0032436"},{"annotations":[109264],"is_not":false,"summary":null,"term":"GO:0007089"}],"cellular_component":[{"annotations":[109257],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[109265],"is_not":false,"summary":null,"term":"GO:0004861"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06171","EnsemblGenomes-Gn:SJAG_01210","UniProtKB/TrEMBL:B6K021"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":126,"start":102}},{"range":{"end":239,"start":167}},{"range":{"end":318,"start":274}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01206"},{"name":"tfb5","uniquename":"SJAG_01207"},{"uniquename":"SJAG_06621"},{"uniquename":"SJAG_06622"},{"name":"pgm1","uniquename":"SJAG_01209"},{"name":"rum1","uniquename":"SJAG_01210"},{"name":"duo1","uniquename":"SJAG_01211"},{"uniquename":"SJAG_01212"},{"name":"pch1","uniquename":"SJAG_01213"},{"name":"cwf12","uniquename":"SJAG_01214"},{"name":"gtb1","uniquename":"SJAG_01215"}],"genes_by_uniquename":{"SJAG_01210":null,"SPBC32F12.09":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":126,"start":102},{"end":239,"start":167},{"end":318,"start":274}],"match_end":318,"match_start":102,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":185,"start":167},{"end":309,"start":300}],"match_end":309,"match_start":167,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":291,"start":277}],"match_end":291,"match_start":277,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1177954,"start_pos":1176998,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":184,"start":166}},{"range":{"end":241,"start":223}},{"range":{"end":275,"start":261}},{"range":{"end":308,"start":299}}],"name":"rum1","ortholog_annotations":[{"gene_uniquename":"SJAG_01210","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC32F12.09","reference_uniquename":"PMID:21511999"}],"product":"CDK inhibitor Rum1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004861"]}},"subset_termids":["GO:0006260","GO:0030163","GO:0044772","GO:0023052","GO:0098772","GO:0030234","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004861":null,"GO:0005634":null,"GO:0007089":null,"GO:0031568":null,"GO:0032436":null,"GO:1903467":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01210.1"],"transcripts_by_uniquename":{"SJAG_01210.1":null},"uniprot_identifier":"B6K021","uniquename":"SJAG_01210"}


id: SJAG_01211
data:
  {"coiled_coil_coords":[{"range":{"end":24,"start":4}},{"range":{"end":133,"start":84}}],"cv_annotations":{"biological_process":[{"annotations":[109254],"is_not":false,"summary":null,"term":"GO:1990758"},{"annotations":[109255],"is_not":false,"summary":null,"term":"GO:1990976"},{"annotations":[109256],"is_not":false,"summary":null,"term":"GO:0051455"}],"cellular_component":[{"annotations":[79941],"is_not":false,"summary":null,"term":"GO:0042729"},{"annotations":[69182],"is_not":false,"summary":null,"term":"GO:0072686"}]},"dbxrefs":["InterPro:IPR013960","GOA:B6K022","UniProtKB/TrEMBL:B6K022","EnsemblGenomes-Tr:EEB06172","EnsemblGenomes-Gn:SJAG_01211"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":264,"start":105}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"tfb5","uniquename":"SJAG_01207"},{"uniquename":"SJAG_06621"},{"uniquename":"SJAG_06622"},{"name":"pgm1","uniquename":"SJAG_01209"},{"name":"rum1","uniquename":"SJAG_01210"},{"name":"duo1","uniquename":"SJAG_01211"},{"uniquename":"SJAG_01212"},{"name":"pch1","uniquename":"SJAG_01213"},{"name":"cwf12","uniquename":"SJAG_01214"},{"name":"gtb1","uniquename":"SJAG_01215"},{"name":"gpx1","uniquename":"SJAG_01216"}],"genes_by_uniquename":{"SJAG_01211":null,"SPBC32F12.08c":null,"YGL061C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"DASH complex subunit Duo1","id":"PF08651","interpro_description":"DASH complex subunit Duo1","interpro_id":"IPR013960","interpro_name":"DASH_Duo1","locations":[{"end":78,"start":6}],"match_end":78,"match_start":6,"name":"DASH_Duo1"},{"dbname":"PANTHER","id":"PTHR28216","interpro_description":"DASH complex subunit Duo1","interpro_id":"IPR013960","interpro_name":"DASH_Duo1","locations":[{"end":214,"start":2}],"match_end":214,"match_start":2,"name":"DASH COMPLEX SUBUNIT DUO1"},{"dbname":"COILS","id":"Coil","locations":[{"end":24,"start":4},{"end":133,"start":84}],"match_end":133,"match_start":4,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":264,"start":105}],"match_end":264,"match_start":105,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":160,"start":134},{"end":241,"start":224}],"match_end":241,"match_start":134,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":173,"start":161},{"end":209,"start":199},{"end":256,"start":242}],"match_end":256,"match_start":161,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":130,"start":105}],"match_end":130,"match_start":105,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1180191,"start_pos":1179397,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":11,"start":1}},{"range":{"end":92,"start":77}},{"range":{"end":128,"start":94}},{"range":{"end":159,"start":133}},{"range":{"end":240,"start":223}}],"name":"duo1","ortholog_annotations":[{"gene_uniquename":"SJAG_01211","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC32F12.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01211","ortholog_taxonid":4932,"ortholog_uniquename":"YGL061C","reference_uniquename":"PMID:29761456"}],"product":"DASH complex subunit Duo1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0072686","GO:0005694","GO:0140013","GO:0000776","GO:0000070","GO:0015630","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0042729":null,"GO:0051455":null,"GO:0072686":null,"GO:1990758":null,"GO:1990976":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01211.1"],"transcripts_by_uniquename":{"SJAG_01211.1":null},"uniprot_identifier":"B6K022","uniquename":"SJAG_01211"}


id: SJAG_01212
data:
  {"coiled_coil_coords":[{"range":{"end":250,"start":230}}],"cv_annotations":{"biological_process":[{"annotations":[109249],"is_not":false,"summary":null,"term":"GO:0090141"}],"cellular_component":[{"annotations":[73931],"is_not":false,"summary":null,"term":"GO:0005741"}],"molecular_function":[{"annotations":[73933],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[61528],"is_not":false,"summary":null,"term":"GO:0008270"}]},"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_06621"},{"uniquename":"SJAG_06622"},{"name":"pgm1","uniquename":"SJAG_01209"},{"name":"rum1","uniquename":"SJAG_01210"},{"name":"duo1","uniquename":"SJAG_01211"},{"uniquename":"SJAG_01212"},{"name":"pch1","uniquename":"SJAG_01213"},{"name":"cwf12","uniquename":"SJAG_01214"},{"name":"gtb1","uniquename":"SJAG_01215"},{"name":"gpx1","uniquename":"SJAG_01216"},{"name":"gem7","uniquename":"SJAG_01217"}],"genes_by_uniquename":{"HGNC:26025":null,"SJAG_01212":null,"SPBC32F12.07c":null,"YMR187C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PROSITE_PROFILES","description":"Zinc finger RING-CH-type profile.","id":"PS51292","interpro_description":"Zinc finger, RING-CH-type","interpro_id":"IPR011016","interpro_name":"Znf_RING-CH","locations":[{"end":75,"start":13}],"match_end":75,"match_start":13,"name":"ZF_RING_CH"},{"dbname":"SUPERFAMILY","id":"SSF57850","locations":[{"end":72,"start":16}],"match_end":72,"match_start":16,"name":"RING/U-box"},{"dbname":"GENE3D","id":"G3DSA:3.30.40.10","interpro_description":"Zinc finger, RING/FYVE/PHD-type","interpro_id":"IPR013083","interpro_name":"Znf_RING/FYVE/PHD","locations":[{"end":75,"start":4}],"match_end":75,"match_start":4,"name":"Zinc/RING finger domain, C3HC4 (zinc finger)"},{"dbname":"PANTHER","id":"PTHR46283","locations":[{"end":340,"start":10}],"match_end":340,"match_start":10,"name":"E3 UBIQUITIN-PROTEIN LIGASE MARCH5"},{"dbname":"COILS","id":"Coil","locations":[{"end":250,"start":230}],"match_end":250,"match_start":230,"name":"Coil"}],"location":{"chromosome_name":"supercont5.3","end_pos":1181399,"start_pos":1180359,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_01212","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26025","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01212","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC32F12.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01212","ortholog_taxonid":4932,"ortholog_uniquename":"YMR187C","reference_uniquename":"PMID:29761456"}],"product":"membrane associated ubiquitin-protein ligase E3, MARCH family","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"],"not-binding":["GO:0061630"]}},"subset_termids":["GO:0007005","GO:0140096","GO:0016746","GO:0005739","GO:0019787"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005741":null,"GO:0008270":null,"GO:0061630":null,"GO:0090141":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01212.1"],"transcripts_by_uniquename":{"SJAG_01212.1":null},"uniprot_identifier":"B6K023","uniquename":"SJAG_01212"}


id: SJAG_01213
data:
  {"cv_annotations":{"biological_process":[{"annotations":[70664],"is_not":false,"summary":null,"term":"GO:0032786"},{"annotations":[70661],"is_not":false,"summary":null,"term":"GO:0045944"},{"annotations":[109246],"is_not":false,"summary":null,"term":"GO:0023052"}],"cellular_component":[{"annotations":[109241],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[109243],"is_not":false,"summary":null,"term":"GO:0070691"}],"molecular_function":[{"annotations":[70665],"is_not":false,"summary":null,"term":"GO:0061575"}],"mondo":[{"annotations":[87066],"is_not":false,"summary":null,"term":"MONDO:0010408"}]},"dbxrefs":["InterPro:IPR013763","InterPro:IPR036915","UniProtKB/TrEMBL:B6K024","EnsemblGenomes-Tr:EEB06174","EnsemblGenomes-Gn:SJAG_01213","InterPro:IPR006671","GOA:B6K024"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":298,"start":247}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_06622"},{"name":"pgm1","uniquename":"SJAG_01209"},{"name":"rum1","uniquename":"SJAG_01210"},{"name":"duo1","uniquename":"SJAG_01211"},{"uniquename":"SJAG_01212"},{"name":"pch1","uniquename":"SJAG_01213"},{"name":"cwf12","uniquename":"SJAG_01214"},{"name":"gtb1","uniquename":"SJAG_01215"},{"name":"gpx1","uniquename":"SJAG_01216"},{"name":"gem7","uniquename":"SJAG_01217"},{"name":"rec14","uniquename":"SJAG_01218"}],"genes_by_uniquename":{"HGNC:1599":null,"HGNC:1600":null,"HGNC:28434":null,"SJAG_01213":null,"SPBC32F12.06":null,"YLR226W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cyclin, N-terminal domain","id":"PF00134","interpro_description":"Cyclin, N-terminal","interpro_id":"IPR006671","interpro_name":"Cyclin_N","locations":[{"end":146,"start":28}],"match_end":146,"match_start":28,"name":"Cyclin_N"},{"dbname":"CDD","description":"CYCLIN_SpCG1C_ScCTK2-like_rpt2","id":"cd20546","locations":[{"end":235,"start":150}],"match_end":235,"match_start":150,"name":"CYCLIN_SpCG1C_ScCTK2-like_rpt2"},{"dbname":"CDD","description":"CYCLIN_SpCG1C-like_rpt1","id":"cd20545","locations":[{"end":146,"start":31}],"match_end":146,"match_start":31,"name":"CYCLIN_SpCG1C-like_rpt1"},{"dbname":"SMART","id":"SM00385","interpro_description":"Cyclin-like domain","interpro_id":"IPR013763","interpro_name":"Cyclin-like_dom","locations":[{"end":140,"start":40}],"match_end":140,"match_start":40,"name":"cyclin_7"},{"dbname":"SUPERFAMILY","id":"SSF47954","interpro_description":"Cyclin-like superfamily","interpro_id":"IPR036915","interpro_name":"Cyclin-like_sf","locations":[{"end":147,"start":5},{"end":252,"start":150}],"match_end":252,"match_start":5,"name":"Cyclin-like"},{"dbname":"GENE3D","id":"G3DSA:1.10.472.10","locations":[{"end":146,"start":2},{"end":246,"start":148}],"match_end":246,"match_start":2},{"dbname":"PANTHER","id":"PTHR10026","interpro_description":"Cyclin/Cyclin-like subunit Ssn8","interpro_id":"IPR043198","interpro_name":"Cyclin/Ssn8","locations":[{"end":262,"start":7}],"match_end":262,"match_start":7,"name":"CYCLIN"},{"dbname":"PIRSF","id":"PIRSF028758","locations":[{"end":255,"start":2}],"match_end":255,"match_start":2,"name":"Cyclin_C_H_G"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":298,"start":247}],"match_end":298,"match_start":247,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":282,"start":247}],"match_end":282,"match_start":247,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1182454,"start_pos":1181443,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":148,"start":137}}],"name":"pch1","ortholog_annotations":[{"gene_uniquename":"SJAG_01213","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1599","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01213","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1600","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01213","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28434","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01213","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC32F12.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01213","ortholog_taxonid":4932,"ortholog_uniquename":"YLR226W","reference_uniquename":"PMID:29761456"}],"product":"P-TEFB associated cyclin, cyclin T Pch1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0061575"]}},"subset_termids":["GO:0023052","GO:0030234","GO:0005829","GO:0005634","GO:0006351","GO:0005654","GO:0098772","GO:0006355"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0023052":null,"GO:0032786":null,"GO:0045944":null,"GO:0061575":null,"GO:0070691":null,"MONDO:0010408":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01213.1"],"transcripts_by_uniquename":{"SJAG_01213.1":null},"uniprot_identifier":"B6K024","uniquename":"SJAG_01213"}


id: SJAG_01214
data:
  {"coiled_coil_coords":[{"range":{"end":77,"start":57}}],"cv_annotations":{"biological_process":[{"annotations":[73494],"is_not":false,"summary":null,"term":"GO:0000350"},{"annotations":[73495],"is_not":false,"summary":null,"term":"GO:0000389"},{"annotations":[109239],"is_not":false,"summary":null,"term":"GO:0045292"}],"cellular_component":[{"annotations":[73497],"is_not":false,"summary":null,"term":"GO:0071013"},{"annotations":[109230],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[73499],"is_not":false,"summary":null,"term":"GO:0071020"},{"annotations":[73496],"is_not":false,"summary":null,"term":"GO:0000974"},{"annotations":[109236],"is_not":false,"summary":null,"term":"GO:0071008"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01214","EnsemblGenomes-Tr:EEB06175","GOA:B6K025","InterPro:IPR009360","InterPro:IPR029012","InterPro:IPR037200","UniProtKB/TrEMBL:B6K025"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":22,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pgm1","uniquename":"SJAG_01209"},{"name":"rum1","uniquename":"SJAG_01210"},{"name":"duo1","uniquename":"SJAG_01211"},{"uniquename":"SJAG_01212"},{"name":"pch1","uniquename":"SJAG_01213"},{"name":"cwf12","uniquename":"SJAG_01214"},{"name":"gtb1","uniquename":"SJAG_01215"},{"name":"gpx1","uniquename":"SJAG_01216"},{"name":"gem7","uniquename":"SJAG_01217"},{"name":"rec14","uniquename":"SJAG_01218"},{"name":"css1","uniquename":"SJAG_01219"}],"genes_by_uniquename":{"HGNC:29201":null,"SJAG_01214":null,"SPBC32F12.05c":null,"YJR050W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Isy1-like splicing family","id":"PF06246","interpro_description":"Pre-mRNA-splicing factor Isy1","interpro_id":"IPR009360","interpro_name":"Isy1","locations":[{"end":218,"start":10}],"match_end":218,"match_start":10,"name":"Isy1"},{"dbname":"FUNFAM","description":"pre-mRNA-splicing factor ISY1 homolog","id":"G3DSA:1.10.287.660:FF:000001","locations":[{"end":82,"start":25}],"match_end":82,"match_start":25},{"dbname":"SUPERFAMILY","id":"SSF140102","interpro_description":"Pre-mRNA-splicing factor Isy1 superfamily","interpro_id":"IPR037200","interpro_name":"Isy1_sf","locations":[{"end":88,"start":14}],"match_end":88,"match_start":14,"name":"ISY1 domain-like"},{"dbname":"GENE3D","id":"G3DSA:1.10.287.660","interpro_description":"Helix hairpin bin domain superfamily","interpro_id":"IPR029012","interpro_name":"Helix_hairpin_bin_sf","locations":[{"end":82,"start":26}],"match_end":82,"match_start":26,"name":"Helix hairpin bin"},{"dbname":"PANTHER","id":"PTHR13021","interpro_description":"Pre-mRNA-splicing factor Isy1","interpro_id":"IPR009360","interpro_name":"Isy1","locations":[{"end":218,"start":5}],"match_end":218,"match_start":5,"name":"PRE-MRNA-SPLICING FACTOR ISY1"},{"dbname":"COILS","id":"Coil","locations":[{"end":77,"start":57}],"match_end":77,"match_start":57,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":22,"start":1}],"match_end":22,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":17,"start":1}],"match_end":17,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1183638,"start_pos":1182860,"strand":"forward"},"name":"cwf12","ortholog_annotations":[{"gene_uniquename":"SJAG_01214","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29201","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01214","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC32F12.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01214","ortholog_taxonid":4932,"ortholog_uniquename":"YJR050W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01214","ortholog_taxonid":4932,"ortholog_uniquename":"YJR050W","reference_uniquename":"PMID:26896847"}],"product":"Prp19 complex subunit Cwf12","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0065003","GO:0016071","GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000350":null,"GO:0000389":null,"GO:0000974":null,"GO:0005829":null,"GO:0045292":null,"GO:0071008":null,"GO:0071013":null,"GO:0071020":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01214.1"],"transcripts_by_uniquename":{"SJAG_01214.1":null},"uniprot_identifier":"B6K025","uniquename":"SJAG_01214"}


id: SJAG_01215
data:
  {"cv_annotations":{"biological_process":[{"annotations":[68464],"is_not":false,"summary":null,"term":"GO:0031122"},{"annotations":[79365],"is_not":false,"summary":null,"term":"GO:0000212"},{"annotations":[79366],"is_not":false,"summary":null,"term":"GO:0007020"},{"annotations":[109224],"is_not":false,"summary":null,"term":"GO:1902408"},{"annotations":[109225],"is_not":false,"summary":null,"term":"GO:0051256"}],"cellular_component":[{"annotations":[109207],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[109208],"is_not":false,"summary":null,"term":"GO:0000923"},{"annotations":[79368],"is_not":false,"summary":null,"term":"GO:0000931"},{"annotations":[109210],"is_not":false,"summary":null,"term":"GO:0008275"},{"annotations":[109211],"is_not":false,"summary":null,"term":"GO:0061496"},{"annotations":[109212],"is_not":false,"summary":null,"term":"GO:0061497"},{"annotations":[109213],"is_not":false,"summary":null,"term":"GO:0031021"},{"annotations":[109214],"is_not":false,"summary":null,"term":"GO:0043332"},{"annotations":[68459],"is_not":false,"summary":null,"term":"GO:0005874"},{"annotations":[79361],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[109218],"is_not":false,"summary":null,"term":"GO:0071957"},{"annotations":[109219],"is_not":false,"summary":null,"term":"GO:0061499"},{"annotations":[79362],"is_not":false,"summary":null,"term":"GO:0005819"}],"molecular_function":[{"annotations":[68460],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[79363],"is_not":false,"summary":null,"term":"GO:0140490"}],"mondo":[{"annotations":[86246],"is_not":false,"summary":null,"term":"MONDO:0014171"}]},"dbxrefs":["InterPro:IPR000217","InterPro:IPR003008","EnsemblGenomes-Gn:SJAG_01215","InterPro:IPR018316","InterPro:IPR008280","InterPro:IPR037103","InterPro:IPR036525","EnsemblGenomes-Tr:EEB06176","InterPro:IPR002454","InterPro:IPR023123","GOA:B6K026","UniProtKB/TrEMBL:B6K026","InterPro:IPR017975"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rum1","uniquename":"SJAG_01210"},{"name":"duo1","uniquename":"SJAG_01211"},{"uniquename":"SJAG_01212"},{"name":"pch1","uniquename":"SJAG_01213"},{"name":"cwf12","uniquename":"SJAG_01214"},{"name":"gtb1","uniquename":"SJAG_01215"},{"name":"gpx1","uniquename":"SJAG_01216"},{"name":"gem7","uniquename":"SJAG_01217"},{"name":"rec14","uniquename":"SJAG_01218"},{"name":"css1","uniquename":"SJAG_01219"},{"uniquename":"SJAG_01220"}],"genes_by_uniquename":{"HGNC:12417":null,"HGNC:12419":null,"SJAG_01215":null,"SPBC32F12.04":null,"YLR212C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Tubulin C-terminal domain","id":"PF03953","interpro_description":"Tubulin/FtsZ, 2-layer sandwich domain","interpro_id":"IPR018316","interpro_name":"Tubulin/FtsZ_2-layer-sand-dom","locations":[{"end":392,"start":264}],"match_end":392,"match_start":264,"name":"Tubulin_C"},{"dbname":"PFAM","description":"Tubulin/FtsZ family, GTPase domain","id":"PF00091","interpro_description":"Tubulin/FtsZ, GTPase domain","interpro_id":"IPR003008","interpro_name":"Tubulin_FtsZ_GTPase","locations":[{"end":214,"start":4}],"match_end":214,"match_start":4,"name":"Tubulin"},{"dbname":"CDD","description":"gamma_tubulin","id":"cd02188","interpro_description":"Gamma tubulin","interpro_id":"IPR002454","interpro_name":"Gamma_tubulin","locations":[{"end":435,"start":3}],"match_end":435,"match_start":3,"name":"gamma_tubulin"},{"dbname":"PROSITE_PATTERNS","description":"Tubulin subunits alpha, beta, and gamma signature.","id":"PS00227","interpro_description":"Tubulin, conserved site","interpro_id":"IPR017975","interpro_name":"Tubulin_CS","locations":[{"end":148,"start":142}],"match_end":148,"match_start":142,"name":"TUBULIN"},{"dbname":"SMART","id":"SM00865","interpro_description":"Tubulin/FtsZ, 2-layer sandwich domain","interpro_id":"IPR018316","interpro_name":"Tubulin/FtsZ_2-layer-sand-dom","locations":[{"end":393,"start":249}],"match_end":393,"match_start":249,"name":"Tubulin_C_4"},{"dbname":"SMART","id":"SM00864","interpro_description":"Tubulin/FtsZ, GTPase domain","interpro_id":"IPR003008","interpro_name":"Tubulin_FtsZ_GTPase","locations":[{"end":247,"start":48}],"match_end":247,"match_start":48,"name":"Tubulin_4"},{"dbname":"PRINTS","description":"Tubulin signature","id":"PR01161","interpro_description":"Tubulin","interpro_id":"IPR000217","interpro_name":"Tubulin","locations":[{"end":31,"start":11},{"end":71,"start":52},{"end":132,"start":96},{"end":174,"start":134},{"end":213,"start":179},{"end":408,"start":380}],"match_end":408,"match_start":11,"name":"TUBULIN"},{"dbname":"PRINTS","description":"Gamma-tubulin signature","id":"PR01164","interpro_description":"Gamma tubulin","interpro_id":"IPR002454","interpro_name":"Gamma_tubulin","locations":[{"end":51,"start":31},{"end":131,"start":116},{"end":206,"start":193},{"end":262,"start":251},{"end":303,"start":288},{"end":362,"start":339},{"end":384,"start":364},{"end":443,"start":420}],"match_end":443,"match_start":31,"name":"GAMMATUBULIN"},{"dbname":"FUNFAM","description":"Tubulin gamma chain","id":"G3DSA:3.40.50.1440:FF:000012","locations":[{"end":269,"start":1}],"match_end":269,"match_start":1},{"dbname":"FUNFAM","description":"Tubulin gamma chain","id":"G3DSA:1.10.287.600:FF:000004","locations":[{"end":442,"start":382}],"match_end":442,"match_start":382},{"dbname":"FUNFAM","description":"Tubulin gamma chain","id":"G3DSA:3.30.1330.20:FF:000003","locations":[{"end":381,"start":270}],"match_end":381,"match_start":270},{"dbname":"SUPERFAMILY","id":"SSF55307","interpro_description":"Tubulin/FtsZ, C-terminal","interpro_id":"IPR008280","interpro_name":"Tub_FtsZ_C","locations":[{"end":443,"start":247}],"match_end":443,"match_start":247,"name":"Tubulin C-terminal domain-like"},{"dbname":"SUPERFAMILY","id":"SSF52490","interpro_description":"Tubulin/FtsZ, GTPase domain superfamily","interpro_id":"IPR036525","interpro_name":"Tubulin/FtsZ_GTPase_sf","locations":[{"end":246,"start":3}],"match_end":246,"match_start":3,"name":"Tubulin nucleotide-binding domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1440","interpro_description":"Tubulin/FtsZ, GTPase domain superfamily","interpro_id":"IPR036525","interpro_name":"Tubulin/FtsZ_GTPase_sf","locations":[{"end":269,"start":1}],"match_end":269,"match_start":1,"name":"Tubulin/FtsZ, GTPase domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.1330.20","interpro_description":"Tubulin/FtsZ-like, C-terminal domain","interpro_id":"IPR037103","interpro_name":"Tubulin/FtsZ-like_C","locations":[{"end":381,"start":270}],"match_end":381,"match_start":270},{"dbname":"GENE3D","id":"G3DSA:1.10.287.600","interpro_description":"Tubulin, C-terminal","interpro_id":"IPR023123","interpro_name":"Tubulin_C","locations":[{"end":442,"start":382}],"match_end":442,"match_start":382,"name":"Helix hairpin bin"},{"dbname":"PANTHER","id":"PTHR11588","interpro_description":"Tubulin","interpro_id":"IPR000217","interpro_name":"Tubulin","locations":[{"end":438,"start":3}],"match_end":438,"match_start":3,"name":"TUBULIN"}],"location":{"chromosome_name":"supercont5.3","end_pos":1185404,"start_pos":1183696,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":153,"start":139}},{"range":{"end":210,"start":196}}],"name":"gtb1","ortholog_annotations":[{"gene_uniquename":"SJAG_01215","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12417","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01215","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:12419","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01215","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC32F12.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01215","ortholog_taxonid":4932,"ortholog_uniquename":"YLR212C","reference_uniquename":"PMID:29761456"}],"product":"gamma-tubulin Gtb1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005525"],"not-binding":["GO:0140490"]}},"subset_termids":["GO:0000070","GO:0005634","GO:0015630","GO:0065003","GO:0005816","GO:0000226","GO:0000281"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000212":null,"GO:0000923":null,"GO:0000931":null,"GO:0005525":null,"GO:0005634":null,"GO:0005737":null,"GO:0005819":null,"GO:0005874":null,"GO:0007020":null,"GO:0008275":null,"GO:0031021":null,"GO:0031122":null,"GO:0043332":null,"GO:0051256":null,"GO:0061496":null,"GO:0061497":null,"GO:0061499":null,"GO:0071957":null,"GO:0140490":null,"GO:1902408":null,"MONDO:0014171":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01215.1"],"transcripts_by_uniquename":{"SJAG_01215.1":null},"uniprot_identifier":"B6K026","uniquename":"SJAG_01215"}


id: SJAG_01216
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109202],"is_not":false,"summary":null,"term":"GO:0045454"},{"annotations":[109203],"is_not":false,"summary":null,"term":"GO:0061692"},{"annotations":[109204],"is_not":false,"summary":null,"term":"GO:0042744"}],"cellular_component":[{"annotations":[109199],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[109200],"is_not":false,"summary":null,"term":"GO:0005739"},{"annotations":[109201],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[109205],"is_not":false,"summary":null,"term":"GO:0008379"}],"mondo":[{"annotations":[85487],"is_not":false,"summary":null,"term":"MONDO:0009593"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K027","EnsemblGenomes-Tr:EEB06177","InterPro:IPR029760","GOA:B6K027","EnsemblGenomes-Gn:SJAG_01216","InterPro:IPR000889","InterPro:IPR029759","InterPro:IPR036249"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"duo1","uniquename":"SJAG_01211"},{"uniquename":"SJAG_01212"},{"name":"pch1","uniquename":"SJAG_01213"},{"name":"cwf12","uniquename":"SJAG_01214"},{"name":"gtb1","uniquename":"SJAG_01215"},{"name":"gpx1","uniquename":"SJAG_01216"},{"name":"gem7","uniquename":"SJAG_01217"},{"name":"rec14","uniquename":"SJAG_01218"},{"name":"css1","uniquename":"SJAG_01219"},{"uniquename":"SJAG_01220"},{"name":"srs2","uniquename":"SJAG_01221"}],"genes_by_uniquename":{"HGNC:4556":null,"HGNC:4559":null,"SJAG_01216":null,"SPBC32F12.03c":null,"YBR244W":null,"YIR037W":null,"YKL026C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glutathione peroxidase","id":"PF00255","interpro_description":"Glutathione peroxidase","interpro_id":"IPR000889","interpro_name":"Glutathione_peroxidase","locations":[{"end":190,"start":83}],"match_end":190,"match_start":83,"name":"GSHPx"},{"dbname":"CDD","description":"GSH_Peroxidase","id":"cd00340","interpro_description":"Glutathione peroxidase","interpro_id":"IPR000889","interpro_name":"Glutathione_peroxidase","locations":[{"end":233,"start":83}],"match_end":233,"match_start":83,"name":"GSH_Peroxidase"},{"dbname":"PROSITE_PATTERNS","description":"Glutathione peroxidases signature 2.","id":"PS00763","interpro_description":"Glutathione peroxidase conserved site","interpro_id":"IPR029760","interpro_name":"GPX_CS","locations":[{"end":146,"start":139}],"match_end":146,"match_start":139,"name":"GLUTATHIONE_PEROXID_2"},{"dbname":"PROSITE_PATTERNS","description":"Glutathione peroxidases active site.","id":"PS00460","interpro_description":"Glutathione peroxidase active site","interpro_id":"IPR029759","interpro_name":"GPX_AS","locations":[{"end":118,"start":103}],"match_end":118,"match_start":103,"name":"GLUTATHIONE_PEROXID_1"},{"dbname":"PROSITE_PROFILES","description":"Thioredoxin domain profile.","id":"PS51352","interpro_description":"Thioredoxin domain","interpro_id":"IPR013766","interpro_name":"Thioredoxin_domain","locations":[{"end":237,"start":77}],"match_end":237,"match_start":77,"name":"THIOREDOXIN_2"},{"dbname":"PROSITE_PROFILES","description":"Glutathione peroxidase profile.","id":"PS51355","interpro_description":"Glutathione peroxidase","interpro_id":"IPR000889","interpro_name":"Glutathione_peroxidase","locations":[{"end":237,"start":73}],"match_end":237,"match_start":73,"name":"GLUTATHIONE_PEROXID_3"},{"dbname":"PRINTS","description":"Glutathione peroxidase family signature","id":"PR01011","interpro_description":"Glutathione peroxidase","interpro_id":"IPR000889","interpro_name":"Glutathione_peroxidase","locations":[{"end":118,"start":101},{"end":152,"start":136},{"end":210,"start":201}],"match_end":210,"match_start":101,"name":"GLUTPROXDASE"},{"dbname":"FUNFAM","description":"Glutathione peroxidase","id":"G3DSA:3.40.30.10:FF:000010","locations":[{"end":237,"start":78}],"match_end":237,"match_start":78},{"dbname":"SUPERFAMILY","id":"SSF52833","interpro_description":"Thioredoxin-like superfamily","interpro_id":"IPR036249","interpro_name":"Thioredoxin-like_sf","locations":[{"end":237,"start":82}],"match_end":237,"match_start":82,"name":"Thioredoxin-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.30.10","locations":[{"end":237,"start":71}],"match_end":237,"match_start":71,"name":"Glutaredoxin"},{"dbname":"PANTHER","id":"PTHR11592","interpro_description":"Glutathione peroxidase","interpro_id":"IPR000889","interpro_name":"Glutathione_peroxidase","locations":[{"end":237,"start":75}],"match_end":237,"match_start":75,"name":"GLUTATHIONE PEROXIDASE"}],"location":{"chromosome_name":"supercont5.3","end_pos":1186664,"start_pos":1185951,"strand":"forward"},"name":"gpx1","ortholog_annotations":[{"gene_uniquename":"SJAG_01216","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4556","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01216","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4559","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01216","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC32F12.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01216","ortholog_taxonid":4932,"ortholog_uniquename":"YBR244W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01216","ortholog_taxonid":4932,"ortholog_uniquename":"YBR244W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01216","ortholog_taxonid":4932,"ortholog_uniquename":"YIR037W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01216","ortholog_taxonid":4932,"ortholog_uniquename":"YIR037W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01216","ortholog_taxonid":4932,"ortholog_uniquename":"YKL026C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01216","ortholog_taxonid":4932,"ortholog_uniquename":"YKL026C","reference_uniquename":"PMID:26896847"}],"product":"H2O2 scavenger glutathione peroxidase Gpx1","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008379"]}},"subset_termids":["GO:0005634","GO:0005829","GO:0005739","GO:0016491","GO:0098754","GO:0051920","MONDO:0019241","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005739":null,"GO:0005829":null,"GO:0008379":null,"GO:0042744":null,"GO:0045454":null,"GO:0061692":null,"MONDO:0009593":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01216.1"],"transcripts_by_uniquename":{"SJAG_01216.1":null},"uniprot_identifier":"B6K027","uniquename":"SJAG_01216"}


id: SJAG_01217
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109354],"is_not":false,"summary":null,"term":"GO:0000387"}],"cellular_component":[{"annotations":[109352],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[109353],"is_not":false,"summary":null,"term":"GO:0032797"}],"molecular_function":[{"annotations":[109355],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K028","EnsemblGenomes-Tr:EEB06178","GOA:B6K028","InterPro:IPR020338","EnsemblGenomes-Gn:SJAG_01217"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01212"},{"name":"pch1","uniquename":"SJAG_01213"},{"name":"cwf12","uniquename":"SJAG_01214"},{"name":"gtb1","uniquename":"SJAG_01215"},{"name":"gpx1","uniquename":"SJAG_01216"},{"name":"gem7","uniquename":"SJAG_01217"},{"name":"rec14","uniquename":"SJAG_01218"},{"name":"css1","uniquename":"SJAG_01219"},{"uniquename":"SJAG_01220"},{"name":"srs2","uniquename":"SJAG_01221"},{"uniquename":"SJAG_05607"}],"genes_by_uniquename":{"HGNC:20045":null,"SJAG_01217":null,"SPBC32F12.16":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Gem-associated protein 7 (Gemin7)","id":"PF11095","interpro_description":"SMN complex, gem-associated protein 7","interpro_id":"IPR020338","interpro_name":"SMN_gemin7","locations":[{"end":81,"start":10}],"match_end":81,"match_start":10,"name":"Gemin7"},{"dbname":"GENE3D","id":"G3DSA:2.30.30.100","locations":[{"end":82,"start":1}],"match_end":82,"match_start":1},{"dbname":"PANTHER","id":"PTHR14679","interpro_description":"SMN complex, gem-associated protein 7","interpro_id":"IPR020338","interpro_name":"SMN_gemin7","locations":[{"end":82,"start":7}],"match_end":82,"match_start":7,"name":"GEM-ASSOCIATED PROTEIN 7"}],"location":{"chromosome_name":"supercont5.3","end_pos":1187243,"start_pos":1186971,"strand":"reverse"},"name":"gem7","ortholog_annotations":[{"gene_uniquename":"SJAG_01217","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20045","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01217","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC32F12.16","reference_uniquename":"PMID:26896847"}],"product":"SMN complex subunit Gem7","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["GO:0005634","GO:0065003","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000387":null,"GO:0003723":null,"GO:0005634":null,"GO:0032797":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01217.1"],"transcripts_by_uniquename":{"SJAG_01217.1":null},"uniprot_identifier":"B6K028","uniquename":"SJAG_01217"}


id: SJAG_01218
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109196],"is_not":false,"summary":null,"term":"GO:0070478"},{"annotations":[109197],"is_not":false,"summary":null,"term":"GO:0070481"}],"cellular_component":[{"annotations":[109193],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[72555],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[109195],"is_not":false,"summary":null,"term":"GO:0055087"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06179","InterPro:IPR019775","InterPro:IPR001680","EnsemblGenomes-Gn:SJAG_01218","InterPro:IPR017986","InterPro:IPR036322","InterPro:IPR015943","UniProtKB/TrEMBL:B6K029"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pch1","uniquename":"SJAG_01213"},{"name":"cwf12","uniquename":"SJAG_01214"},{"name":"gtb1","uniquename":"SJAG_01215"},{"name":"gpx1","uniquename":"SJAG_01216"},{"name":"gem7","uniquename":"SJAG_01217"},{"name":"rec14","uniquename":"SJAG_01218"},{"name":"css1","uniquename":"SJAG_01219"},{"uniquename":"SJAG_01220"},{"name":"srs2","uniquename":"SJAG_01221"},{"uniquename":"SJAG_05607"},{"uniquename":"SJAG_01222"}],"genes_by_uniquename":{"HGNC:30300":null,"SJAG_01218":null,"SPBC32F12.02":null,"YGL213C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"WD domain, G-beta repeat","id":"PF00400","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":131,"start":102},{"end":215,"start":178},{"end":257,"start":220},{"end":296,"start":262}],"match_end":296,"match_start":102,"name":"WD40"},{"dbname":"CDD","description":"WD40","id":"cd00200","locations":[{"end":297,"start":15}],"match_end":297,"match_start":15,"name":"WD40"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats profile.","id":"PS50082","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":266,"start":183}],"match_end":266,"match_start":183,"name":"WD_REPEATS_2"},{"dbname":"PROSITE_PROFILES","description":"Trp-Asp (WD) repeats circular profile.","id":"PS50294","locations":[{"end":219,"start":183},{"end":260,"start":225}],"match_end":260,"match_start":183,"name":"WD_REPEATS_REGION"},{"dbname":"SMART","id":"SM00320","interpro_description":"WD40 repeat","interpro_id":"IPR001680","interpro_name":"WD40_rpt","locations":[{"end":42,"start":4},{"end":87,"start":47},{"end":131,"start":93},{"end":173,"start":134},{"end":215,"start":176},{"end":257,"start":218},{"end":297,"start":260}],"match_end":297,"match_start":4,"name":"WD40_4"},{"dbname":"SUPERFAMILY","id":"SSF50978","interpro_description":"WD40-repeat-containing domain superfamily","interpro_id":"IPR036322","interpro_name":"WD40_repeat_dom_sf","locations":[{"end":297,"start":27}],"match_end":297,"match_start":27,"name":"WD40 repeat-like"},{"dbname":"GENE3D","id":"G3DSA:2.130.10.10","interpro_description":"WD40/YVTN repeat-like-containing domain superfamily","interpro_id":"IPR015943","interpro_name":"WD40/YVTN_repeat-like_dom_sf","locations":[{"end":299,"start":5}],"match_end":299,"match_start":5},{"dbname":"PANTHER","id":"PTHR44090","interpro_description":"Superkiller complex protein 8","interpro_id":"IPR051510","interpro_name":"SKI8","locations":[{"end":299,"start":3}],"match_end":299,"match_start":3,"name":"WD REPEAT-CONTAINING PROTEIN 61"}],"location":{"chromosome_name":"supercont5.3","end_pos":1188416,"start_pos":1187422,"strand":"reverse"},"name":"rec14","ortholog_annotations":[{"gene_uniquename":"SJAG_01218","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30300","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01218","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC32F12.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01218","ortholog_taxonid":4932,"ortholog_uniquename":"YGL213C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01218","ortholog_taxonid":4932,"ortholog_uniquename":"YGL213C","reference_uniquename":"PMID:26896847"}],"product":"Ski complex WD repeat subunit Ski8","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0016071","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0055087":null,"GO:0070478":null,"GO:0070481":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01218.1"],"transcripts_by_uniquename":{"SJAG_01218.1":null},"uniprot_identifier":"B6K029","uniquename":"SJAG_01218"}


id: SJAG_01219
data:
  {"cv_annotations":{"biological_process":[{"annotations":[109188],"is_not":false,"summary":null,"term":"GO:0046513"},{"annotations":[109189],"is_not":false,"summary":null,"term":"GO:0046521"}],"cellular_component":[{"annotations":[109184],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[109185],"is_not":false,"summary":null,"term":"GO:0000324"},{"annotations":[109187],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[109191],"is_not":false,"summary":null,"term":"GO:0052714"},{"annotations":[63301],"is_not":false,"summary":null,"term":"GO:0004767"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K030","EnsemblGenomes-Tr:EEB06180","InterPro:IPR005135","InterPro:IPR036691","InterPro:IPR038772","GOA:B6K030","EnsemblGenomes-Gn:SJAG_01219"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cwf12","uniquename":"SJAG_01214"},{"name":"gtb1","uniquename":"SJAG_01215"},{"name":"gpx1","uniquename":"SJAG_01216"},{"name":"gem7","uniquename":"SJAG_01217"},{"name":"rec14","uniquename":"SJAG_01218"},{"name":"css1","uniquename":"SJAG_01219"},{"uniquename":"SJAG_01220"},{"name":"srs2","uniquename":"SJAG_01221"},{"uniquename":"SJAG_05607"},{"uniquename":"SJAG_01222"},{"name":"emc5","uniquename":"SJAG_01223"}],"genes_by_uniquename":{"HGNC:11121":null,"SJAG_01219":null,"SPBC32F12.01c":null,"YER019W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Endonuclease/Exonuclease/phosphatase family","id":"PF03372","interpro_description":"Endonuclease/exonuclease/phosphatase","interpro_id":"IPR005135","interpro_name":"Endo/exonuclease/phosphatase","locations":[{"end":289,"start":12}],"match_end":289,"match_start":12,"name":"Exo_endo_phos"},{"dbname":"CDD","description":"RgfB-like","id":"cd09079","locations":[{"end":296,"start":11}],"match_end":296,"match_start":11,"name":"RgfB-like"},{"dbname":"SUPERFAMILY","id":"SSF56219","interpro_description":"Endonuclease/exonuclease/phosphatase superfamily","interpro_id":"IPR036691","interpro_name":"Endo/exonu/phosph_ase_sf","locations":[{"end":296,"start":6}],"match_end":296,"match_start":6,"name":"DNase I-like"},{"dbname":"GENE3D","id":"G3DSA:3.60.10.10","interpro_description":"Endonuclease/exonuclease/phosphatase superfamily","interpro_id":"IPR036691","interpro_name":"Endo/exonu/phosph_ase_sf","locations":[{"end":298,"start":1}],"match_end":298,"match_start":1,"name":"Endonuclease/exonuclease/phosphatase"},{"dbname":"PANTHER","id":"PTHR16320","interpro_description":"Sphingomyelinase C/Sphingomyelin phosphodiesterase 2-like","interpro_id":"IPR038772","interpro_name":"Sph/SMPD2-like","locations":[{"end":277,"start":4}],"match_end":277,"match_start":4,"name":"SPHINGOMYELINASE FAMILY MEMBER"}],"location":{"chromosome_name":"supercont5.3","end_pos":1190469,"start_pos":1189186,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":377,"start":361}}],"name":"css1","ortholog_annotations":[{"gene_uniquename":"SJAG_01219","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11121","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01219","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC32F12.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01219","ortholog_taxonid":4932,"ortholog_uniquename":"YER019W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01219","ortholog_taxonid":4932,"ortholog_uniquename":"YER019W","reference_uniquename":"PMID:26896847"}],"product":"plasma membrane inositol phosphosphingolipid phospholipase C, Css1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0052714","GO:0004767"]}},"subset_termids":["GO:0005783","GO:0005773","GO:0005886","GO:0006629","GO:0016788"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000324":null,"GO:0004767":null,"GO:0005783":null,"GO:0005886":null,"GO:0046513":null,"GO:0046521":null,"GO:0052714":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":354,"start":332}},{"assigned_by":"TMHMM","range":{"end":386,"start":364}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01219.1"],"transcripts_by_uniquename":{"SJAG_01219.1":null},"uniprot_identifier":"B6K030","uniquename":"SJAG_01219"}


id: SJAG_01220
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[98571],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[98572],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06181","UniProtKB/TrEMBL:B6K031","EnsemblGenomes-Gn:SJAG_01220","InterPro:IPR002737","GOA:B6K031"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gtb1","uniquename":"SJAG_01215"},{"name":"gpx1","uniquename":"SJAG_01216"},{"name":"gem7","uniquename":"SJAG_01217"},{"name":"rec14","uniquename":"SJAG_01218"},{"name":"css1","uniquename":"SJAG_01219"},{"uniquename":"SJAG_01220"},{"name":"srs2","uniquename":"SJAG_01221"},{"uniquename":"SJAG_05607"},{"uniquename":"SJAG_01222"},{"name":"emc5","uniquename":"SJAG_01223"},{"name":"dam1","uniquename":"SJAG_01224"}],"genes_by_uniquename":{"HGNC:14014":null,"SJAG_01220":null,"SPAC4H3.04c":null,"YJR008W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Memo-like protein","id":"PF01875","interpro_description":"MEMO1 family","interpro_id":"IPR002737","interpro_name":"MEMO1_fam","locations":[{"end":306,"start":12}],"match_end":306,"match_start":12,"name":"Memo"},{"dbname":"CDD","description":"MEMO_like","id":"cd07361","interpro_description":"MEMO1 family","interpro_id":"IPR002737","interpro_name":"MEMO1_fam","locations":[{"end":309,"start":10}],"match_end":309,"match_start":10,"name":"MEMO_like"},{"dbname":"GENE3D","id":"G3DSA:3.40.830.10","locations":[{"end":309,"start":7}],"match_end":309,"match_start":7},{"dbname":"PANTHER","id":"PTHR11060","interpro_description":"MEMO1 family","interpro_id":"IPR002737","interpro_name":"MEMO1_fam","locations":[{"end":308,"start":8}],"match_end":308,"match_start":8,"name":"PROTEIN MEMO1"},{"dbname":"HAMAP","description":"MEMO1 family protein <locus_tag>.","id":"MF_00055","interpro_description":"MEMO1 family","interpro_id":"IPR002737","interpro_name":"MEMO1_fam","locations":[{"end":309,"start":7}],"match_end":309,"match_start":7,"name":"MEMO1"},{"dbname":"NCBIFAM","description":"AmmeMemoRadiSam system protein B","id":"TIGR04336","locations":[{"end":306,"start":9}],"match_end":306,"match_start":9,"name":"AmmeMemoSam_B"}],"location":{"chromosome_name":"supercont5.3","end_pos":1192047,"start_pos":1190977,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":151,"start":140}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_01220","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14014","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01220","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4H3.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01220","ortholog_taxonid":4932,"ortholog_uniquename":"YJR008W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01220","ortholog_taxonid":4932,"ortholog_uniquename":"YJR008W","reference_uniquename":"PMID:26896847"}],"product":"MEMO1 family, human MEMO1 ortholog, ancient conserved protein, in some organisms this domain is present with ammecr1 which interacts with mediator complex and is implicated in transcription, implicated in signalling and localization to the plasma membrane","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01220.1"],"transcripts_by_uniquename":{"SJAG_01220.1":null},"uniprot_identifier":"B6K031","uniquename":"SJAG_01220"}


id: SJAG_01221
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":36,"start":29}}],"cv_annotations":{"biological_process":[{"annotations":[98574],"is_not":false,"summary":null,"term":"GO:1990426"},{"annotations":[98575],"is_not":false,"summary":null,"term":"GO:0006301"},{"annotations":[78015],"is_not":false,"summary":null,"term":"GO:0000725"}],"cellular_component":[{"annotations":[78014],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[78013],"is_not":false,"summary":null,"term":"GO:0043138"},{"annotations":[66668],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[66669],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[66671],"is_not":false,"summary":null,"term":"GO:0016787"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K032","InterPro:IPR034739","InterPro:IPR013986","InterPro:IPR014016","EnsemblGenomes-Gn:SJAG_01221","GOA:B6K032","InterPro:IPR027417","InterPro:IPR000212","EnsemblGenomes-Tr:EEB06182","InterPro:IPR014017"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gpx1","uniquename":"SJAG_01216"},{"name":"gem7","uniquename":"SJAG_01217"},{"name":"rec14","uniquename":"SJAG_01218"},{"name":"css1","uniquename":"SJAG_01219"},{"uniquename":"SJAG_01220"},{"name":"srs2","uniquename":"SJAG_01221"},{"uniquename":"SJAG_05607"},{"uniquename":"SJAG_01222"},{"name":"emc5","uniquename":"SJAG_01223"},{"name":"dam1","uniquename":"SJAG_01224"},{"name":"csr101","uniquename":"SJAG_01225"}],"genes_by_uniquename":{"SJAG_01221":null,"SPAC4H3.05":null,"YJL092W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"UvrD-like helicase C-terminal domain","id":"PF13361","interpro_description":"UvrD-like DNA helicase, C-terminal","interpro_id":"IPR014017","interpro_name":"DNA_helicase_UvrD-like_C","locations":[{"end":644,"start":292}],"match_end":644,"match_start":292,"name":"UvrD_C"},{"dbname":"PFAM","description":"UvrD/REP helicase N-terminal domain","id":"PF00580","interpro_description":"UvrD-like helicase, ATP-binding domain","interpro_id":"IPR014016","interpro_name":"UvrD-like_ATP-bd","locations":[{"end":287,"start":10}],"match_end":287,"match_start":10,"name":"UvrD-helicase"},{"dbname":"CDD","description":"DEXQc_UvrD","id":"cd17932","locations":[{"end":298,"start":11}],"match_end":298,"match_start":11,"name":"DEXQc_UvrD"},{"dbname":"CDD","description":"SF1_C_UvrD","id":"cd18807","locations":[{"end":643,"start":587}],"match_end":643,"match_start":587,"name":"SF1_C_UvrD"},{"dbname":"PROSITE_PROFILES","description":"UvrD-like DNA helicase ATP-binding domain profile.","id":"PS51198","interpro_description":"UvrD-like helicase, ATP-binding domain","interpro_id":"IPR014016","interpro_name":"UvrD-like_ATP-bd","locations":[{"end":301,"start":8}],"match_end":301,"match_start":8,"name":"UVRD_HELICASE_ATP_BIND"},{"dbname":"PROSITE_PROFILES","description":"UvrD-like DNA helicase C-terminal domain profile.","id":"PS51217","interpro_description":"UvrD-like DNA helicase, C-terminal","interpro_id":"IPR014017","interpro_name":"DNA_helicase_UvrD-like_C","locations":[{"end":597,"start":302}],"match_end":597,"match_start":302,"name":"UVRD_HELICASE_CTER"},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":646,"start":4}],"match_end":646,"match_start":4,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":111,"start":10},{"end":288,"start":209},{"end":399,"start":295},{"end":669,"start":581}],"match_end":669,"match_start":10},{"dbname":"GENE3D","id":"G3DSA:1.10.486.10","locations":[{"end":580,"start":400}],"match_end":580,"match_start":400,"name":"PCRA; domain 4"},{"dbname":"GENE3D","id":"G3DSA:1.10.10.160","interpro_description":"DExx box DNA helicase domain superfamily","interpro_id":"IPR013986","interpro_name":"DExx_box_DNA_helicase_dom_sf","locations":[{"end":208,"start":112}],"match_end":208,"match_start":112},{"dbname":"PANTHER","id":"PTHR11070","interpro_description":"DNA helicase, UvrD/REP type","interpro_id":"IPR000212","interpro_name":"DNA_helicase_UvrD/REP","locations":[{"end":747,"start":9}],"match_end":747,"match_start":9,"name":"UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER"}],"location":{"chromosome_name":"supercont5.3","end_pos":1195251,"start_pos":1192469,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":215,"start":206}},{"range":{"end":418,"start":405}},{"range":{"end":822,"start":809}}],"name":"srs2","ortholog_annotations":[{"gene_uniquename":"SJAG_01221","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4H3.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01221","ortholog_taxonid":4932,"ortholog_uniquename":"YJL092W","reference_uniquename":"PMID:29761456"}],"product":"ATP-dependent DNA helicase, UvrD subfamily","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003677","GO:0005524"],"not-binding":["GO:0043138","GO:0016787"]}},"subset_termids":["GO:0140097","GO:0016853","GO:0005634","GO:0006310","GO:0006260","GO:0006281"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000725":null,"GO:0003677":null,"GO:0005524":null,"GO:0005634":null,"GO:0006301":null,"GO:0016787":null,"GO:0043138":null,"GO:1990426":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01221.1"],"transcripts_by_uniquename":{"SJAG_01221.1":null},"uniprot_identifier":"B6K032","uniquename":"SJAG_01221"}


id: SJAG_01222
data:
  {"coiled_coil_coords":[{"range":{"end":61,"start":41}},{"range":{"end":636,"start":616}}],"cv_annotations":{"cellular_component":[{"annotations":[73352],"is_not":false,"summary":null,"term":"GO:0010494"},{"annotations":[73350],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[73349],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[73351],"is_not":false,"summary":null,"term":"GO:0003730"},{"annotations":[73347],"is_not":false,"summary":null,"term":"GO:0008143"},{"annotations":[73348],"is_not":false,"summary":null,"term":"GO:0008266"}]},"dbxrefs":["InterPro:IPR012677","InterPro:IPR000504","UniProtKB/TrEMBL:B6K033","InterPro:IPR036053","EnsemblGenomes-Tr:EEB06183","GOA:B6K033","InterPro:IPR002004","EnsemblGenomes-Gn:SJAG_01222","InterPro:IPR003954","InterPro:IPR006515","InterPro:IPR035979"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":80,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rec14","uniquename":"SJAG_01218"},{"name":"css1","uniquename":"SJAG_01219"},{"uniquename":"SJAG_01220"},{"name":"srs2","uniquename":"SJAG_01221"},{"uniquename":"SJAG_05607"},{"uniquename":"SJAG_01222"},{"name":"emc5","uniquename":"SJAG_01223"},{"name":"dam1","uniquename":"SJAG_01224"},{"name":"csr101","uniquename":"SJAG_01225"},{"name":"ubi5","uniquename":"SJAG_01226"},{"name":"pth4","uniquename":"SJAG_05221"}],"genes_by_uniquename":{"SJAG_01222":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"MLLE domain","id":"PF00658","interpro_description":"Polyadenylate-binding protein/Hyperplastic disc protein, C-terminal","interpro_id":"IPR002004","interpro_name":"PABP_HYD_C","locations":[{"end":630,"start":566}],"match_end":630,"match_start":566,"name":"MLLE"},{"dbname":"PFAM","description":"RNA recognition motif","id":"PF00076","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":150,"start":81},{"end":237,"start":169},{"end":330,"start":262},{"end":433,"start":365}],"match_end":433,"match_start":81,"name":"RRM_1"},{"dbname":"CDD","description":"RRM4_I_PABPs","id":"cd12381","locations":[{"end":440,"start":362}],"match_end":440,"match_start":362,"name":"RRM4_I_PABPs"},{"dbname":"CDD","description":"RRM3_I_PABPs","id":"cd12380","locations":[{"end":338,"start":259}],"match_end":338,"match_start":259,"name":"RRM3_I_PABPs"},{"dbname":"CDD","description":"RRM2_I_PABPs","id":"cd12379","interpro_description":"PABP, RNA recognition motif 2","interpro_id":"IPR045305","interpro_name":"RRM2_I_PABPs","locations":[{"end":241,"start":165}],"match_end":241,"match_start":165,"name":"RRM2_I_PABPs"},{"dbname":"CDD","description":"RRM1_I_PABPs","id":"cd12378","interpro_description":"PABP, RNA recognition motif 1","interpro_id":"IPR034364","interpro_name":"PABP_RRM1","locations":[{"end":159,"start":80}],"match_end":159,"match_start":80,"name":"RRM1_I_PABPs"},{"dbname":"PROSITE_PROFILES","description":"Eukaryotic RNA Recognition Motif (RRM) profile.","id":"PS50102","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":157,"start":79},{"end":244,"start":167},{"end":337,"start":260},{"end":440,"start":363}],"match_end":440,"match_start":79,"name":"RRM"},{"dbname":"PROSITE_PROFILES","description":"Poly(A)-binding protein C-terminal (PABC) domain profile.","id":"PS51309","interpro_description":"Polyadenylate-binding protein/Hyperplastic disc protein, C-terminal","interpro_id":"IPR002004","interpro_name":"PABP_HYD_C","locations":[{"end":635,"start":558}],"match_end":635,"match_start":558,"name":"PABC"},{"dbname":"SMART","id":"SM00360","interpro_description":"RNA recognition motif domain","interpro_id":"IPR000504","interpro_name":"RRM_dom","locations":[{"end":153,"start":80},{"end":240,"start":168},{"end":333,"start":261},{"end":436,"start":364}],"match_end":436,"match_start":80,"name":"rrm1_1"},{"dbname":"SMART","id":"SM00517","interpro_description":"Polyadenylate-binding protein/Hyperplastic disc protein, C-terminal","interpro_id":"IPR002004","interpro_name":"PABP_HYD_C","locations":[{"end":633,"start":570}],"match_end":633,"match_start":570,"name":"poly_2"},{"dbname":"SMART","id":"SM00361","interpro_description":"RNA recognition motif domain, eukaryotes","interpro_id":"IPR003954","interpro_name":"RRM_dom_euk","locations":[{"end":153,"start":80},{"end":240,"start":168},{"end":333,"start":261},{"end":436,"start":364}],"match_end":436,"match_start":80,"name":"rrm2_1"},{"dbname":"FUNFAM","description":"Polyadenylate-binding protein","id":"G3DSA:3.30.70.330:FF:000441","locations":[{"end":464,"start":347}],"match_end":464,"match_start":347},{"dbname":"FUNFAM","description":"Polyadenylate-binding protein","id":"G3DSA:3.30.70.330:FF:000384","locations":[{"end":346,"start":249}],"match_end":346,"match_start":249},{"dbname":"FUNFAM","description":"Polyadenylate-binding protein","id":"G3DSA:3.30.70.330:FF:000003","locations":[{"end":248,"start":162}],"match_end":248,"match_start":162},{"dbname":"FUNFAM","description":"Polyadenylate-binding protein","id":"G3DSA:3.30.70.330:FF:000648","locations":[{"end":161,"start":57}],"match_end":161,"match_start":57},{"dbname":"SUPERFAMILY","id":"SSF63570","interpro_description":"PABC (PABP) domain","interpro_id":"IPR036053","interpro_name":"PABP-dom","locations":[{"end":523,"start":511},{"end":641,"start":562}],"match_end":641,"match_start":511,"name":"PABC (PABP) domain"},{"dbname":"SUPERFAMILY","id":"SSF54928","interpro_description":"RNA-binding domain superfamily","interpro_id":"IPR035979","interpro_name":"RBD_domain_sf","locations":[{"end":247,"start":77},{"end":444,"start":260}],"match_end":444,"match_start":77,"name":"RNA-binding domain, RBD"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.330","interpro_description":"Nucleotide-binding alpha-beta plait domain superfamily","interpro_id":"IPR012677","interpro_name":"Nucleotide-bd_a/b_plait_sf","locations":[{"end":448,"start":11}],"match_end":448,"match_start":11},{"dbname":"GENE3D","id":"G3DSA:1.10.1900.10","locations":[{"end":643,"start":559}],"match_end":643,"match_start":559},{"dbname":"PANTHER","id":"PTHR24012","locations":[{"end":142,"start":39}],"match_end":142,"match_start":39,"name":"RNA BINDING PROTEIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":61,"start":41},{"end":636,"start":616}],"match_end":636,"match_start":41,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":80,"start":1}],"match_end":80,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":36,"start":23},{"end":80,"start":68}],"match_end":80,"match_start":23,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":22,"start":1},{"end":63,"start":38}],"match_end":63,"match_start":1,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"polyadenylate binding protein, human types 1, 2, 3, 4 family","id":"TIGR01628","interpro_description":"Polyadenylate binding protein, human types 1, 2, 3, 4","interpro_id":"IPR006515","interpro_name":"PABP_1234","locations":[{"end":477,"start":80}],"match_end":477,"match_start":80,"name":"PABP-1234"}],"location":{"chromosome_name":"supercont5.3","end_pos":1198298,"start_pos":1196310,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":66,"start":36}},{"range":{"end":493,"start":473}},{"range":{"end":505,"start":495}},{"range":{"end":660,"start":634}}],"product":"major poly(A) binding protein Pabp/Pab1-related","references_by_uniquename":{"GO_REF:0000033":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008143","GO:0003730","GO:0008266"]}},"subset_termids":["GO:0005829","GO:0010494","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003730":null,"GO:0005634":null,"GO:0005829":null,"GO:0008143":null,"GO:0008266":null,"GO:0010494":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01222.1"],"transcripts_by_uniquename":{"SJAG_01222.1":null},"uniprot_identifier":"B6K033","uniquename":"SJAG_01222"}


id: SJAG_01223
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":106,"start":24}}],"cv_annotations":{"biological_process":[{"annotations":[101531],"is_not":false,"summary":null,"term":"GO:0045048"}],"cellular_component":[{"annotations":[101529],"is_not":false,"summary":null,"term":"GO:0072546"}],"sequence":[{"annotations":[80860],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["InterPro:IPR018937","EnsemblGenomes-Gn:SJAG_01223","UniProtKB/TrEMBL:B6K034","EnsemblGenomes-Tr:EEB06184"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"css1","uniquename":"SJAG_01219"},{"uniquename":"SJAG_01220"},{"name":"srs2","uniquename":"SJAG_01221"},{"uniquename":"SJAG_05607"},{"uniquename":"SJAG_01222"},{"name":"emc5","uniquename":"SJAG_01223"},{"name":"dam1","uniquename":"SJAG_01224"},{"name":"csr101","uniquename":"SJAG_01225"},{"name":"ubi5","uniquename":"SJAG_01226"},{"name":"pth4","uniquename":"SJAG_05221"},{"name":"cwh43","uniquename":"SJAG_01227"}],"genes_by_uniquename":{"HGNC:28100":null,"SJAG_01223":null,"SPAP4C9.02":null,"YIL027C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Membrane magnesium transporter","id":"PF10270","interpro_description":"Membrane magnesium transporter","interpro_id":"IPR018937","interpro_name":"MMgT","locations":[{"end":99,"start":15}],"match_end":99,"match_start":15,"name":"MMgT"}],"location":{"chromosome_name":"supercont5.3","end_pos":1199039,"start_pos":1198667,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":17,"start":8}}],"name":"emc5","ortholog_annotations":[{"gene_uniquename":"SJAG_01223","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28100","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01223","ortholog_taxonid":4896,"ortholog_uniquename":"SPAP4C9.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01223","ortholog_taxonid":4932,"ortholog_uniquename":"YIL027C","reference_uniquename":"PMID:29761456"}],"product":"ER membrane protein complex subunit Emc5","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":23,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{},"subset_termids":["GO:0005789","GO:0061024","GO:0005783"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0045048":null,"GO:0072546":null,"SO:0000418":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01223.1"],"transcripts_by_uniquename":{"SJAG_01223.1":null},"uniprot_identifier":"B6K034","uniquename":"SJAG_01223"}


id: SJAG_01224
data:
  {"coiled_coil_coords":[{"range":{"end":53,"start":33}},{"range":{"end":111,"start":91}}],"cv_annotations":{"biological_process":[{"annotations":[98950],"is_not":false,"summary":null,"term":"GO:0031619"},{"annotations":[98951],"is_not":false,"summary":null,"term":"GO:0007019"},{"annotations":[98952],"is_not":false,"summary":null,"term":"GO:1990942"},{"annotations":[98954],"is_not":false,"summary":null,"term":"GO:1990758"},{"annotations":[98955],"is_not":false,"summary":null,"term":"GO:0061804"},{"annotations":[98956],"is_not":false,"summary":null,"term":"GO:1990976"},{"annotations":[98957],"is_not":false,"summary":null,"term":"GO:0140274"},{"annotations":[98958],"is_not":false,"summary":null,"term":"GO:0051455"}],"cellular_component":[{"annotations":[98941],"is_not":false,"summary":null,"term":"GO:0055028"},{"annotations":[62677],"is_not":false,"summary":null,"term":"GO:0042729"},{"annotations":[98945],"is_not":false,"summary":null,"term":"GO:1990537"},{"annotations":[98946],"is_not":false,"summary":null,"term":"GO:0044732"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K035","InterPro:IPR013962","GOA:B6K035","EnsemblGenomes-Tr:EEB06185","EnsemblGenomes-Gn:SJAG_01224"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":131,"start":94}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01220"},{"name":"srs2","uniquename":"SJAG_01221"},{"uniquename":"SJAG_05607"},{"uniquename":"SJAG_01222"},{"name":"emc5","uniquename":"SJAG_01223"},{"name":"dam1","uniquename":"SJAG_01224"},{"name":"csr101","uniquename":"SJAG_01225"},{"name":"ubi5","uniquename":"SJAG_01226"},{"name":"pth4","uniquename":"SJAG_05221"},{"name":"cwh43","uniquename":"SJAG_01227"},{"name":"mis14","uniquename":"SJAG_01228"}],"genes_by_uniquename":{"SJAG_01224":null,"SPAC589.08c":null,"YGR113W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"DASH complex subunit Dam1","id":"PF08653","interpro_description":"DASH complex subunit Dam1","interpro_id":"IPR013962","interpro_name":"DASH_Dam1","locations":[{"end":84,"start":30}],"match_end":84,"match_start":30,"name":"DASH_Dam1"},{"dbname":"PANTHER","id":"PTHR28113","interpro_description":"DASH complex subunit Dam1","interpro_id":"IPR013962","interpro_name":"DASH_Dam1","locations":[{"end":131,"start":13}],"match_end":131,"match_start":13,"name":"DASH COMPLEX SUBUNIT DAM1"},{"dbname":"COILS","id":"Coil","locations":[{"end":53,"start":33},{"end":111,"start":91}],"match_end":111,"match_start":33,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":131,"start":94}],"match_end":131,"match_start":94,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":131,"start":121}],"match_end":131,"match_start":121,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":114,"start":94}],"match_end":114,"match_start":94,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1199960,"start_pos":1199565,"strand":"reverse"},"name":"dam1","ortholog_annotations":[{"gene_uniquename":"SJAG_01224","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC589.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01224","ortholog_taxonid":4932,"ortholog_uniquename":"YGR113W","reference_uniquename":"PMID:29761456"}],"product":"DASH complex subunit Dam1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0015630","GO:0005816","GO:0072686","GO:0000070","GO:0005634","GO:0000226","GO:0000776","GO:0140013","GO:0005938","GO:0005694"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0007019":null,"GO:0031619":null,"GO:0042729":null,"GO:0044732":null,"GO:0051455":null,"GO:0055028":null,"GO:0061804":null,"GO:0140274":null,"GO:1990537":null,"GO:1990758":null,"GO:1990942":null,"GO:1990976":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01224.1"],"transcripts_by_uniquename":{"SJAG_01224.1":null},"uniprot_identifier":"B6K035","uniquename":"SJAG_01224"}


id: SJAG_01225
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98960],"is_not":false,"summary":null,"term":"GO:0120010"}],"cellular_component":[{"annotations":[98959],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[76653],"is_not":false,"summary":null,"term":"GO:0008526"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01225","InterPro:IPR001251","EnsemblGenomes-Tr:EEB06186","InterPro:IPR036273","InterPro:IPR036865","UniProtKB/TrEMBL:B6K036"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":65,"start":33}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"srs2","uniquename":"SJAG_01221"},{"uniquename":"SJAG_05607"},{"uniquename":"SJAG_01222"},{"name":"emc5","uniquename":"SJAG_01223"},{"name":"dam1","uniquename":"SJAG_01224"},{"name":"csr101","uniquename":"SJAG_01225"},{"name":"ubi5","uniquename":"SJAG_01226"},{"name":"pth4","uniquename":"SJAG_05221"},{"name":"cwh43","uniquename":"SJAG_01227"},{"name":"mis14","uniquename":"SJAG_01228"},{"name":"vps1301","uniquename":"SJAG_01229"}],"genes_by_uniquename":{"HGNC:28381":null,"SJAG_01225":null,"SPAC589.09":null,"YLR380W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"CRAL/TRIO domain","id":"PF00650","interpro_description":"CRAL-TRIO lipid binding domain","interpro_id":"IPR001251","interpro_name":"CRAL-TRIO_dom","locations":[{"end":314,"start":161}],"match_end":314,"match_start":161,"name":"CRAL_TRIO"},{"dbname":"CDD","description":"SEC14","id":"cd00170","interpro_description":"CRAL-TRIO lipid binding domain","interpro_id":"IPR001251","interpro_name":"CRAL-TRIO_dom","locations":[{"end":315,"start":157}],"match_end":315,"match_start":157,"name":"SEC14"},{"dbname":"PROSITE_PROFILES","description":"CRAL-TRIO lipid binding domain profile.","id":"PS50191","interpro_description":"CRAL-TRIO lipid binding domain","interpro_id":"IPR001251","interpro_name":"CRAL-TRIO_dom","locations":[{"end":320,"start":153}],"match_end":320,"match_start":153,"name":"CRAL_TRIO"},{"dbname":"SMART","id":"SM00516","interpro_description":"CRAL-TRIO lipid binding domain","interpro_id":"IPR001251","interpro_name":"CRAL-TRIO_dom","locations":[{"end":317,"start":153}],"match_end":317,"match_start":153,"name":"sec14_4"},{"dbname":"SUPERFAMILY","id":"SSF46938","interpro_description":"CRAL/TRIO, N-terminal domain superfamily","interpro_id":"IPR036273","interpro_name":"CRAL/TRIO_N_dom_sf","locations":[{"end":142,"start":75}],"match_end":142,"match_start":75,"name":"CRAL/TRIO N-terminal domain"},{"dbname":"SUPERFAMILY","id":"SSF52087","interpro_description":"CRAL-TRIO lipid binding domain superfamily","interpro_id":"IPR036865","interpro_name":"CRAL-TRIO_dom_sf","locations":[{"end":338,"start":153}],"match_end":338,"match_start":153,"name":"CRAL/TRIO domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.525.10","interpro_description":"CRAL-TRIO lipid binding domain superfamily","interpro_id":"IPR036865","interpro_name":"CRAL-TRIO_dom_sf","locations":[{"end":359,"start":47}],"match_end":359,"match_start":47},{"dbname":"PANTHER","id":"PTHR46590","interpro_description":"Phosphatidylinositol transfer protein/CRAL-TRIO domain","interpro_id":"IPR052432","interpro_name":"PITP/CRAL-TRIO","locations":[{"end":411,"start":26}],"match_end":411,"match_start":26,"name":"PHOSPHATIDYLINOSITOL TRANSFER PROTEIN CSR1-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":65,"start":33}],"match_end":65,"match_start":33,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":60,"start":49}],"match_end":60,"match_start":49,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":47,"start":33}],"match_end":47,"match_start":33,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1201322,"start_pos":1200066,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":59,"start":46}}],"name":"csr101","ortholog_annotations":[{"gene_uniquename":"SJAG_01225","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:28381","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01225","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC589.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01225","ortholog_taxonid":4932,"ortholog_uniquename":"YLR380W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01225","ortholog_taxonid":4932,"ortholog_uniquename":"YLR380W","reference_uniquename":"PMID:26896847"}],"product":"sec14 cytosolic factor family, phospholipid-intermembrane transfer protein Csr1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008526"]}},"subset_termids":["GO:0061024","GO:0005739","GO:0120013"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0008526":null,"GO:0120010":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01225.1"],"transcripts_by_uniquename":{"SJAG_01225.1":null},"uniprot_identifier":"B6K036","uniquename":"SJAG_01225"}


id: SJAG_01226
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100130],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[80613],"is_not":false,"summary":null,"term":"GO:0019941"},{"annotations":[100134],"is_not":false,"summary":null,"term":"GO:0042254"}],"cellular_component":[{"annotations":[100126],"is_not":false,"summary":null,"term":"GO:0022627"},{"annotations":[98965],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[80616],"is_not":false,"summary":null,"term":"GO:0031386"},{"annotations":[70022],"is_not":false,"summary":null,"term":"GO:0003735"},{"annotations":[80617],"is_not":false,"summary":null,"term":"GO:0031625"},{"annotations":[100140],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR019956","InterPro:IPR019954","GOA:B6K037","UniProtKB/TrEMBL:B6K037","InterPro:IPR011332","EnsemblGenomes-Gn:SJAG_01226","InterPro:IPR000626","EnsemblGenomes-Tr:EEB06187","InterPro:IPR002906","InterPro:IPR038582","InterPro:IPR029071"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_05607"},{"uniquename":"SJAG_01222"},{"name":"emc5","uniquename":"SJAG_01223"},{"name":"dam1","uniquename":"SJAG_01224"},{"name":"csr101","uniquename":"SJAG_01225"},{"name":"ubi5","uniquename":"SJAG_01226"},{"name":"pth4","uniquename":"SJAG_05221"},{"name":"cwh43","uniquename":"SJAG_01227"},{"name":"mis14","uniquename":"SJAG_01228"},{"name":"vps1301","uniquename":"SJAG_01229"},{"name":"dep1","uniquename":"SJAG_01230"}],"genes_by_uniquename":{"HGNC:10417":null,"SJAG_01226":null,"SPAC589.10c":null,"SPAC6G10.11c":null,"YLR167W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein S27a","id":"PF01599","interpro_description":"Small ribosomal subunit protein eS31","interpro_id":"IPR002906","interpro_name":"Ribosomal_eS31","locations":[{"end":145,"start":102}],"match_end":145,"match_start":102,"name":"Ribosomal_S27"},{"dbname":"PFAM","description":"Ubiquitin family","id":"PF00240","interpro_description":"Ubiquitin-like domain","interpro_id":"IPR000626","interpro_name":"Ubiquitin-like_dom","locations":[{"end":74,"start":3}],"match_end":74,"match_start":3,"name":"ubiquitin"},{"dbname":"CDD","description":"Ubl_ubiquitin","id":"cd01803","locations":[{"end":76,"start":1}],"match_end":76,"match_start":1,"name":"Ubl_ubiquitin"},{"dbname":"PROSITE_PATTERNS","description":"Ubiquitin domain signature.","id":"PS00299","interpro_description":"Ubiquitin conserved site","interpro_id":"IPR019954","interpro_name":"Ubiquitin_CS","locations":[{"end":52,"start":27}],"match_end":52,"match_start":27,"name":"UBIQUITIN_1"},{"dbname":"PROSITE_PROFILES","description":"Ubiquitin domain profile.","id":"PS50053","interpro_description":"Ubiquitin-like domain","interpro_id":"IPR000626","interpro_name":"Ubiquitin-like_dom","locations":[{"end":76,"start":1}],"match_end":76,"match_start":1,"name":"UBIQUITIN_2"},{"dbname":"SMART","id":"SM01402","interpro_description":"Small ribosomal subunit protein eS31","interpro_id":"IPR002906","interpro_name":"Ribosomal_eS31","locations":[{"end":145,"start":102}],"match_end":145,"match_start":102,"name":"Ribosomal_S27_2"},{"dbname":"SMART","id":"SM00213","interpro_description":"Ubiquitin-like domain","interpro_id":"IPR000626","interpro_name":"Ubiquitin-like_dom","locations":[{"end":72,"start":1}],"match_end":72,"match_start":1,"name":"ubq_7"},{"dbname":"PRINTS","description":"Ubiquitin signature","id":"PR00348","interpro_description":"Ubiquitin domain","interpro_id":"IPR019956","interpro_name":"Ubiquitin_dom","locations":[{"end":74,"start":11}],"match_end":74,"match_start":11,"name":"UBIQUITIN"},{"dbname":"FUNFAM","description":"Ubiquitin-40S ribosomal protein S27a","id":"G3DSA:3.10.20.90:FF:000008","locations":[{"end":79,"start":1}],"match_end":79,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF54236","interpro_description":"Ubiquitin-like domain superfamily","interpro_id":"IPR029071","interpro_name":"Ubiquitin-like_domsf","locations":[{"end":93,"start":1}],"match_end":93,"match_start":1,"name":"Ubiquitin-like"},{"dbname":"SUPERFAMILY","id":"SSF57829","interpro_description":"Zinc-binding ribosomal protein","interpro_id":"IPR011332","interpro_name":"Ribosomal_zn-bd","locations":[{"end":147,"start":100}],"match_end":147,"match_start":100,"name":"Zn-binding ribosomal proteins"},{"dbname":"GENE3D","id":"G3DSA:6.20.50.150","interpro_description":"Small ribosomal subunit protein eS31 eukaryotic-type superfamily","interpro_id":"IPR038582","interpro_name":"Ribosomal_eS31_euk-type_sf","locations":[{"end":149,"start":83}],"match_end":149,"match_start":83},{"dbname":"GENE3D","id":"G3DSA:3.10.20.90","locations":[{"end":82,"start":1}],"match_end":82,"match_start":1},{"dbname":"PANTHER","id":"PTHR10666","interpro_description":"Ubiquitin and ubiquitin-like","interpro_id":"IPR050158","interpro_name":"Ubiquitin_ubiquitin-like","locations":[{"end":86,"start":1}],"match_end":86,"match_start":1,"name":"UBIQUITIN"},{"dbname":"NCBIFAM","description":"30S ribosomal protein S27ae","id":"NF001669","locations":[{"end":143,"start":93}],"match_end":143,"match_start":93,"name":"PRK00432.1"}],"location":{"chromosome_name":"supercont5.3","end_pos":1202002,"start_pos":1201550,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":96,"start":77}}],"name":"ubi5","ortholog_annotations":[{"gene_uniquename":"SJAG_01226","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10417","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01226","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:10417","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01226","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC589.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01226","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC6G10.11c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01226","ortholog_taxonid":4932,"ortholog_uniquename":"YLR167W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01226","ortholog_taxonid":4932,"ortholog_uniquename":"YLR167W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01226","ortholog_taxonid":4932,"ortholog_uniquename":"YLR167W","reference_uniquename":"PMID:26896847"}],"product":"ribosomal-ubiquitin fusion protein","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270","GO:0031625"],"not-binding":["GO:0003735","GO:0031386"]}},"subset_termids":["GO:0005198","GO:0030163","GO:0005730","GO:0031386","GO:0042254","GO:0002181","GO:0005829","GO:0005634","GO:0022626"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0005730":null,"GO:0008270":null,"GO:0019941":null,"GO:0022627":null,"GO:0031386":null,"GO:0031625":null,"GO:0042254":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01226.1"],"transcripts_by_uniquename":{"SJAG_01226.1":null},"uniprot_identifier":"B6K037","uniquename":"SJAG_01226"}


id: SJAG_01227
data:
  {"cv_annotations":{"biological_process":[{"annotations":[78241],"is_not":false,"summary":null,"term":"GO:0031505"},{"annotations":[78240],"is_not":false,"summary":null,"term":"GO:0006506"}],"cellular_component":[{"annotations":[98985],"is_not":false,"summary":null,"term":"GO:0005635"},{"annotations":[98986],"is_not":false,"summary":null,"term":"GO:1990578"},{"annotations":[98987],"is_not":false,"summary":null,"term":"GO:0005886"}]},"dbxrefs":["InterPro:IPR036691","EnsemblGenomes-Tr:EEB06189","InterPro:IPR027317","InterPro:IPR019402","GOA:B6K039","UniProtKB/TrEMBL:B6K039","EnsemblGenomes-Gn:SJAG_01227"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"emc5","uniquename":"SJAG_01223"},{"name":"dam1","uniquename":"SJAG_01224"},{"name":"csr101","uniquename":"SJAG_01225"},{"name":"ubi5","uniquename":"SJAG_01226"},{"name":"pth4","uniquename":"SJAG_05221"},{"name":"cwh43","uniquename":"SJAG_01227"},{"name":"mis14","uniquename":"SJAG_01228"},{"name":"vps1301","uniquename":"SJAG_01229"},{"name":"dep1","uniquename":"SJAG_01230"},{"name":"hnt1","uniquename":"SJAG_01231"},{"name":"sqs2","uniquename":"SJAG_01232"}],"genes_by_uniquename":{"HGNC:26133":null,"SJAG_01227":null,"SPAC589.12":null,"YCR017C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Frag1/DRAM/Sfk1 family","id":"PF10277","interpro_description":"Frag1/DRAM/Sfk1","interpro_id":"IPR019402","interpro_name":"Frag1/DRAM/Sfk1","locations":[{"end":220,"start":13}],"match_end":220,"match_start":13,"name":"Frag1"},{"dbname":"PFAM","description":"PGAP2IP, C-terminal nuclease-like domain","id":"PF23226","locations":[{"end":923,"start":684}],"match_end":923,"match_start":684,"name":"Exo_endo_phos_PGAP2IP"},{"dbname":"PFAM","description":"PGAP2IP, second transmembrane domain","id":"PF23021","interpro_description":"PGAP2IP, second transmembrane domain","interpro_id":"IPR053911","interpro_name":"PGAP2IP_TM_2nd","locations":[{"end":616,"start":448}],"match_end":616,"match_start":448,"name":"6TM_2nd_PGAP2IP"},{"dbname":"PFAM","description":"PGAP2IP, first transmembrane domain","id":"PF23022","interpro_description":"PGAP2IP, first transmembrane domain","interpro_id":"IPR053912","interpro_name":"PGAP2IP_TM_1nd","locations":[{"end":422,"start":268}],"match_end":422,"match_start":268,"name":"6TM_1st_PGAP2IP"},{"dbname":"FUNFAM","description":"Calcofluor white hypersensitive protein","id":"G3DSA:3.60.10.10:FF:000031","locations":[{"end":886,"start":687}],"match_end":886,"match_start":687},{"dbname":"SUPERFAMILY","id":"SSF56219","interpro_description":"Endonuclease/exonuclease/phosphatase superfamily","interpro_id":"IPR036691","interpro_name":"Endo/exonu/phosph_ase_sf","locations":[{"end":884,"start":688}],"match_end":884,"match_start":688,"name":"DNase I-like"},{"dbname":"GENE3D","id":"G3DSA:3.60.10.10","interpro_description":"Endonuclease/exonuclease/phosphatase superfamily","interpro_id":"IPR036691","interpro_name":"Endo/exonu/phosph_ase_sf","locations":[{"end":878,"start":691}],"match_end":878,"match_start":691,"name":"Endonuclease/exonuclease/phosphatase"},{"dbname":"PANTHER","id":"PTHR14859","interpro_description":"GPI-anchor maturation lipid remodeler","interpro_id":"IPR051916","interpro_name":"GPI-anchor_lipid_remodeler","locations":[{"end":904,"start":273}],"match_end":904,"match_start":273,"name":"CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR"}],"location":{"chromosome_name":"supercont5.3","end_pos":1205921,"start_pos":1202971,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":88,"start":83}}],"name":"cwh43","ortholog_annotations":[{"gene_uniquename":"SJAG_01227","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26133","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01227","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC589.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01227","ortholog_taxonid":4932,"ortholog_uniquename":"YCR017C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01227","ortholog_taxonid":4932,"ortholog_uniquename":"YCR017C","reference_uniquename":"PMID:26896847"}],"product":"glycosylceramide biosynthesis protein Cwh43","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0071554","GO:0005634","GO:0006629","GO:0005789","GO:0005783","GO:0005886","GO:0051604"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005635":null,"GO:0005886":null,"GO:0006506":null,"GO:0031505":null,"GO:1990578":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":35,"start":13}},{"assigned_by":"TMHMM","range":{"end":93,"start":71}},{"assigned_by":"TMHMM","range":{"end":122,"start":100}},{"assigned_by":"TMHMM","range":{"end":151,"start":132}},{"assigned_by":"TMHMM","range":{"end":181,"start":164}},{"assigned_by":"TMHMM","range":{"end":209,"start":191}},{"assigned_by":"TMHMM","range":{"end":275,"start":253}},{"assigned_by":"TMHMM","range":{"end":312,"start":290}},{"assigned_by":"TMHMM","range":{"end":336,"start":319}},{"assigned_by":"TMHMM","range":{"end":362,"start":340}},{"assigned_by":"TMHMM","range":{"end":391,"start":369}},{"assigned_by":"TMHMM","range":{"end":430,"start":411}},{"assigned_by":"TMHMM","range":{"end":465,"start":443}},{"assigned_by":"TMHMM","range":{"end":507,"start":485}},{"assigned_by":"TMHMM","range":{"end":529,"start":512}},{"assigned_by":"TMHMM","range":{"end":555,"start":533}},{"assigned_by":"TMHMM","range":{"end":584,"start":562}},{"assigned_by":"TMHMM","range":{"end":618,"start":599}},{"assigned_by":"TMHMM","range":{"end":671,"start":654}},{"assigned_by":"TMHMM","range":{"end":704,"start":686}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01227.1"],"transcripts_by_uniquename":{"SJAG_01227.1":null},"uniprot_identifier":"B6K039","uniquename":"SJAG_01227"}


id: SJAG_01228
data:
  {"coiled_coil_coords":[{"range":{"end":127,"start":107}}],"cv_annotations":{"biological_process":[{"annotations":[62553],"is_not":false,"summary":null,"term":"GO:0000070"}],"cellular_component":[{"annotations":[99595],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[99596],"is_not":false,"summary":null,"term":"GO:0000939"},{"annotations":[74756],"is_not":false,"summary":null,"term":"GO:0000444"},{"annotations":[99599],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["InterPro:IPR013950","UniProtKB/TrEMBL:B6K040","GOA:B6K040","EnsemblGenomes-Tr:EEB06190","EnsemblGenomes-Gn:SJAG_01228"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dam1","uniquename":"SJAG_01224"},{"name":"csr101","uniquename":"SJAG_01225"},{"name":"ubi5","uniquename":"SJAG_01226"},{"name":"pth4","uniquename":"SJAG_05221"},{"name":"cwh43","uniquename":"SJAG_01227"},{"name":"mis14","uniquename":"SJAG_01228"},{"name":"vps1301","uniquename":"SJAG_01229"},{"name":"dep1","uniquename":"SJAG_01230"},{"name":"hnt1","uniquename":"SJAG_01231"},{"name":"sqs2","uniquename":"SJAG_01232"},{"name":"pps1","uniquename":"SJAG_01233"}],"genes_by_uniquename":{"HGNC:24548":null,"SJAG_01228":null,"SPAC688.02c":null,"YPL233W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Kinetochore protein Mis14 like","id":"PF08641","interpro_description":"Kinetochore Mis14/Nsl1","interpro_id":"IPR013950","interpro_name":"Mis14/Nsl1","locations":[{"end":198,"start":74}],"match_end":198,"match_start":74,"name":"Mis14"},{"dbname":"PANTHER","id":"PTHR31749","interpro_description":"Kinetochore Mis14/Nsl1","interpro_id":"IPR013950","interpro_name":"Mis14/Nsl1","locations":[{"end":220,"start":2}],"match_end":220,"match_start":2,"name":"KINETOCHORE-ASSOCIATED PROTEIN NSL1 HOMOLOG"},{"dbname":"COILS","id":"Coil","locations":[{"end":127,"start":107}],"match_end":127,"match_start":107,"name":"Coil"}],"location":{"chromosome_name":"supercont5.3","end_pos":1206932,"start_pos":1206144,"strand":"reverse"},"name":"mis14","ortholog_annotations":[{"gene_uniquename":"SJAG_01228","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24548","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01228","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC688.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01228","ortholog_taxonid":4932,"ortholog_uniquename":"YPL233W","reference_uniquename":"PMID:29761456"}],"product":"MIS12/MIND complex Mis14/Nsl1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0000776","GO:0005694","GO:0000070","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000070":null,"GO:0000444":null,"GO:0000939":null,"GO:0005634":null,"GO:0005829":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01228.1"],"transcripts_by_uniquename":{"SJAG_01228.1":null},"uniprot_identifier":"B6K040","uniquename":"SJAG_01228"}


id: SJAG_01229
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107105],"is_not":false,"summary":null,"term":"GO:0120010"},{"annotations":[74290],"is_not":false,"summary":null,"term":"GO:0045324"},{"annotations":[74292],"is_not":false,"summary":null,"term":"GO:0007005"},{"annotations":[74291],"is_not":false,"summary":null,"term":"GO:0006623"}],"cellular_component":[{"annotations":[107103],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[107104],"is_not":false,"summary":null,"term":"GO:0005768"}],"molecular_function":[{"annotations":[107109],"is_not":false,"summary":null,"term":"GO:0005543"},{"annotations":[107110],"is_not":false,"summary":null,"term":"GO:0120014"}],"mondo":[{"annotations":[86127],"is_not":false,"summary":null,"term":"MONDO:0014796"},{"annotations":[85793],"is_not":false,"summary":null,"term":"MONDO:0008695"}]},"dbxrefs":["InterPro:IPR031642","InterPro:IPR009543","InterPro:IPR026847","InterPro:IPR031645","InterPro:IPR031646","UniProtKB/TrEMBL:B6K041","InterPro:IPR026854","EnsemblGenomes-Gn:SJAG_01229","EnsemblGenomes-Tr:EEB06191"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"csr101","uniquename":"SJAG_01225"},{"name":"ubi5","uniquename":"SJAG_01226"},{"name":"pth4","uniquename":"SJAG_05221"},{"name":"cwh43","uniquename":"SJAG_01227"},{"name":"mis14","uniquename":"SJAG_01228"},{"name":"vps1301","uniquename":"SJAG_01229"},{"name":"dep1","uniquename":"SJAG_01230"},{"name":"hnt1","uniquename":"SJAG_01231"},{"name":"sqs2","uniquename":"SJAG_01232"},{"name":"pps1","uniquename":"SJAG_01233"},{"name":"gar1","uniquename":"SJAG_01234"}],"genes_by_uniquename":{"HGNC:1908":null,"HGNC:23594":null,"SJAG_01229":null,"SPBC21C3.01c":null,"YLL040C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Vacuolar-sorting associated protein 13, adaptor binding domain","id":"PF25036","locations":[{"end":2418,"start":1849}],"match_end":2418,"match_start":1849,"name":"VPS13_VAB"},{"dbname":"PFAM","description":"Intermembrane lipid transfer protein VPS13, C-terminal","id":"PF25037","interpro_description":"Intermembrane lipid transfer protein VPS13-like, C-terminal","interpro_id":"IPR056748","interpro_name":"VPS13-like_C","locations":[{"end":3037,"start":2944}],"match_end":3037,"match_start":2944,"name":"VPS13_C"},{"dbname":"PFAM","description":"VPS13-like family N-terminal region","id":"PF12624","interpro_description":"Vacuolar protein sorting-associated protein 13, N-terminal domain","interpro_id":"IPR026854","interpro_name":"VPS13_N","locations":[{"end":1286,"start":1}],"match_end":1286,"match_start":1,"name":"VPS13_N"},{"dbname":"PANTHER","id":"PTHR16166","interpro_description":"Vacuolar protein sorting-associated protein 13","interpro_id":"IPR026847","interpro_name":"VPS13","locations":[{"end":3035,"start":1}],"match_end":3035,"match_start":1,"name":"VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN  VPS13"}],"location":{"chromosome_name":"supercont5.3","end_pos":1217048,"start_pos":1207688,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":449,"start":438}},{"range":{"end":884,"start":871}},{"range":{"end":1170,"start":1152}},{"range":{"end":1377,"start":1366}},{"range":{"end":1469,"start":1458}},{"range":{"end":1697,"start":1686}},{"range":{"end":1789,"start":1774}},{"range":{"end":1945,"start":1934}},{"range":{"end":2090,"start":2083}},{"range":{"end":2489,"start":2480}},{"range":{"end":2856,"start":2847}}],"name":"vps1301","ortholog_annotations":[{"gene_uniquename":"SJAG_01229","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1908","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01229","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:23594","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01229","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.01c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01229","ortholog_taxonid":4932,"ortholog_uniquename":"YLL040C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01229","ortholog_taxonid":4932,"ortholog_uniquename":"YLL040C","reference_uniquename":"PMID:26896847"}],"product":"intermembrane lipid transfer protein, chorein family Vps13a","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005543"],"not-binding":["GO:0120014"]}},"subset_termids":["GO:0031410","GO:0120013","GO:0006605","MONDO:0005244","GO:0016192","MONDO:0005559","MONDO:0005093","MONDO:0002039","GO:0005829","GO:0005768","GO:0007005","GO:0008289","GO:0061024"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005543":null,"GO:0005768":null,"GO:0005829":null,"GO:0006623":null,"GO:0007005":null,"GO:0045324":null,"GO:0120010":null,"GO:0120014":null,"MONDO:0008695":null,"MONDO:0014796":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01229.1"],"transcripts_by_uniquename":{"SJAG_01229.1":null},"uniprot_identifier":"B6K041","uniquename":"SJAG_01229"}


id: SJAG_01230
data:
  {"coiled_coil_coords":[{"range":{"end":234,"start":207}}],"cv_annotations":{"biological_process":[{"annotations":[107114],"is_not":false,"summary":null,"term":"GO:0000122"},{"annotations":[107115],"is_not":false,"summary":null,"term":"GO:0045815"}],"cellular_component":[{"annotations":[107112],"is_not":false,"summary":null,"term":"GO:0033698"},{"annotations":[107113],"is_not":false,"summary":null,"term":"GO:0070210"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01230","UniProtKB/TrEMBL:B6K042","EnsemblGenomes-Tr:EEB06192","InterPro:IPR013907"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":78,"start":1}},{"range":{"end":213,"start":94}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubi5","uniquename":"SJAG_01226"},{"name":"pth4","uniquename":"SJAG_05221"},{"name":"cwh43","uniquename":"SJAG_01227"},{"name":"mis14","uniquename":"SJAG_01228"},{"name":"vps1301","uniquename":"SJAG_01229"},{"name":"dep1","uniquename":"SJAG_01230"},{"name":"hnt1","uniquename":"SJAG_01231"},{"name":"sqs2","uniquename":"SJAG_01232"},{"name":"pps1","uniquename":"SJAG_01233"},{"name":"gar1","uniquename":"SJAG_01234"},{"name":"trs1","uniquename":"SJAG_01235"}],"genes_by_uniquename":{"HGNC:17262":null,"HGNC:20512":null,"HGNC:29545":null,"SJAG_01230":null,"SPBC21C3.02c":null,"YAL013W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Sds3-like","id":"PF08598","interpro_description":"Sds3-like","interpro_id":"IPR013907","interpro_name":"Sds3","locations":[{"end":327,"start":217}],"match_end":327,"match_start":217,"name":"Sds3"},{"dbname":"SMART","id":"SM01401","interpro_description":"Sds3-like","interpro_id":"IPR013907","interpro_name":"Sds3","locations":[{"end":391,"start":217}],"match_end":391,"match_start":217,"name":"Sds3_2"},{"dbname":"PANTHER","id":"PTHR21964","interpro_description":"Sds3-like","interpro_id":"IPR013907","interpro_name":"Sds3","locations":[{"end":344,"start":55}],"match_end":344,"match_start":55,"name":"BREAST CANCER METASTASIS-SUPPRESSOR 1"},{"dbname":"COILS","id":"Coil","locations":[{"end":234,"start":207}],"match_end":234,"match_start":207,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":78,"start":1},{"end":213,"start":94}],"match_end":213,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":25,"start":1},{"end":55,"start":37},{"end":162,"start":141}],"match_end":162,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":140,"start":124},{"end":213,"start":189}],"match_end":213,"match_start":124,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":178,"start":164}],"match_end":178,"match_start":164,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1219141,"start_pos":1217936,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":176,"start":163}},{"range":{"end":197,"start":179}}],"name":"dep1","ortholog_annotations":[{"gene_uniquename":"SJAG_01230","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17262","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01230","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20512","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01230","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29545","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01230","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC21C3.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01230","ortholog_taxonid":4932,"ortholog_uniquename":"YAL013W","reference_uniquename":"PMID:29761456"}],"product":"Rpd3L histone deacetylase complex subunit, Sds3-like family protein Dep1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0006351","GO:0005694","GO:0006355","GO:0006325","GO:0005654","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0033698":null,"GO:0045815":null,"GO:0070210":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01230.1"],"transcripts_by_uniquename":{"SJAG_01230.1":null},"uniprot_identifier":"B6K042","uniquename":"SJAG_01230"}


id: SJAG_01231
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":94,"start":94}}],"cv_annotations":{"biological_process":[{"annotations":[74987],"is_not":false,"summary":null,"term":"GO:0009117"}],"cellular_component":[{"annotations":[115074],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[115075],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[115077],"is_not":false,"summary":null,"term":"GO:0043530"}],"mondo":[{"annotations":[86988],"is_not":false,"summary":null,"term":"MONDO:0007646"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01231","InterPro:IPR036265","InterPro:IPR011146","GOA:B6K043","InterPro:IPR019808","UniProtKB/TrEMBL:B6K043","InterPro:IPR039384","EnsemblGenomes-Tr:EEB06193","InterPro:IPR001310"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pth4","uniquename":"SJAG_05221"},{"name":"cwh43","uniquename":"SJAG_01227"},{"name":"mis14","uniquename":"SJAG_01228"},{"name":"vps1301","uniquename":"SJAG_01229"},{"name":"dep1","uniquename":"SJAG_01230"},{"name":"hnt1","uniquename":"SJAG_01231"},{"name":"sqs2","uniquename":"SJAG_01232"},{"name":"pps1","uniquename":"SJAG_01233"},{"name":"gar1","uniquename":"SJAG_01234"},{"name":"trs1","uniquename":"SJAG_01235"},{"name":"vac14","uniquename":"SJAG_01236"}],"genes_by_uniquename":{"HGNC:18344":null,"HGNC:4912":null,"SJAG_01231":null,"SPCC1442.14c":null,"YDL125C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"HIT domain","id":"PF01230","interpro_description":"HIT-like domain","interpro_id":"IPR011146","interpro_name":"HIT-like","locations":[{"end":100,"start":10}],"match_end":100,"match_start":10,"name":"HIT"},{"dbname":"CDD","description":"HINT_subgroup","id":"cd01277","interpro_description":"HINT family","interpro_id":"IPR039384","interpro_name":"HINT","locations":[{"end":100,"start":2}],"match_end":100,"match_start":2,"name":"HINT_subgroup"},{"dbname":"PROSITE_PATTERNS","description":"HIT domain signature.","id":"PS00892","interpro_description":"Histidine triad, conserved site","interpro_id":"IPR019808","interpro_name":"Histidine_triad_CS","locations":[{"end":99,"start":81}],"match_end":99,"match_start":81,"name":"HIT_1"},{"dbname":"PROSITE_PROFILES","description":"HIT domain profile.","id":"PS51084","interpro_description":"HIT-like domain","interpro_id":"IPR011146","interpro_name":"HIT-like","locations":[{"end":107,"start":4}],"match_end":107,"match_start":4,"name":"HIT_2"},{"dbname":"PRINTS","description":"Histidine triad family signature","id":"PR00332","interpro_description":"Histidine triad (HIT) protein","interpro_id":"IPR001310","interpro_name":"Histidine_triad_HIT","locations":[{"end":20,"start":4},{"end":43,"start":25},{"end":98,"start":88}],"match_end":98,"match_start":4,"name":"HISTRIAD"},{"dbname":"SUPERFAMILY","id":"SSF54197","interpro_description":"HIT-like superfamily","interpro_id":"IPR036265","interpro_name":"HIT-like_sf","locations":[{"end":131,"start":1}],"match_end":131,"match_start":1,"name":"HIT-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.428.10","interpro_description":"HIT-like superfamily","interpro_id":"IPR036265","interpro_name":"HIT-like_sf","locations":[{"end":133,"start":1}],"match_end":133,"match_start":1},{"dbname":"PANTHER","id":"PTHR46648","interpro_description":"Histidine triad (HIT) protein","interpro_id":"IPR001310","interpro_name":"Histidine_triad_HIT","locations":[{"end":132,"start":1}],"match_end":132,"match_start":1,"name":"HIT FAMILY PROTEIN 1"}],"location":{"chromosome_name":"supercont5.3","end_pos":1220302,"start_pos":1219901,"strand":"reverse"},"name":"hnt1","ortholog_annotations":[{"gene_uniquename":"SJAG_01231","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:18344","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01231","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:4912","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01231","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1442.14c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01231","ortholog_taxonid":4932,"ortholog_uniquename":"YDL125C","reference_uniquename":"PMID:29761456"}],"product":"adenosine 5'-monophosphoramidase","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0043530"]}},"subset_termids":["GO:0005634","GO:0055086","GO:0016810","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0009117":null,"GO:0043530":null,"MONDO:0007646":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01231.1"],"transcripts_by_uniquename":{"SJAG_01231.1":null},"uniprot_identifier":"B6K043","uniquename":"SJAG_01231"}


id: SJAG_01232
data:
  {"cv_annotations":{"biological_process":[{"annotations":[115073],"is_not":false,"summary":null,"term":"GO:0042254"}],"cellular_component":[{"annotations":[115070],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[115071],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[115072],"is_not":false,"summary":null,"term":"GO:0005634"}],"mondo":[{"annotations":[87502],"is_not":false,"summary":null,"term":"MONDO:0014936"}]},"dbxrefs":["InterPro:IPR000467","EnsemblGenomes-Tr:EEB06194","GOA:B6K044","EnsemblGenomes-Gn:SJAG_01232","UniProtKB/TrEMBL:B6K044"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":404,"start":324}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cwh43","uniquename":"SJAG_01227"},{"name":"mis14","uniquename":"SJAG_01228"},{"name":"vps1301","uniquename":"SJAG_01229"},{"name":"dep1","uniquename":"SJAG_01230"},{"name":"hnt1","uniquename":"SJAG_01231"},{"name":"sqs2","uniquename":"SJAG_01232"},{"name":"pps1","uniquename":"SJAG_01233"},{"name":"gar1","uniquename":"SJAG_01234"},{"name":"trs1","uniquename":"SJAG_01235"},{"name":"vac14","uniquename":"SJAG_01236"},{"uniquename":"SJAG_05222"}],"genes_by_uniquename":{"HGNC:11183":null,"HGNC:24684":null,"SJAG_01232":null,"SPCC1442.13c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"G-patch domain","id":"PF01585","interpro_description":"G-patch domain","interpro_id":"IPR000467","interpro_name":"G_patch_dom","locations":[{"end":283,"start":243}],"match_end":283,"match_start":243,"name":"G-patch"},{"dbname":"PROSITE_PROFILES","description":"G-patch domain profile.","id":"PS50174","interpro_description":"G-patch domain","interpro_id":"IPR000467","interpro_name":"G_patch_dom","locations":[{"end":288,"start":242}],"match_end":288,"match_start":242,"name":"G_PATCH"},{"dbname":"SMART","id":"SM00443","interpro_description":"G-patch domain","interpro_id":"IPR000467","interpro_name":"G_patch_dom","locations":[{"end":286,"start":240}],"match_end":286,"match_start":240,"name":"G-patch_5"},{"dbname":"PANTHER","id":"PTHR14195","interpro_description":"Splicing-associated domain-containing protein","interpro_id":"IPR051189","interpro_name":"Splicing_assoc_domain","locations":[{"end":283,"start":211}],"match_end":283,"match_start":211,"name":"G PATCH DOMAIN CONTAINING PROTEIN 2"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":404,"start":324}],"match_end":404,"match_start":324,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":375,"start":324}],"match_end":375,"match_start":324,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1222174,"start_pos":1220960,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":49,"start":20}},{"range":{"end":141,"start":130}},{"range":{"end":221,"start":193}},{"range":{"end":376,"start":320}},{"range":{"end":398,"start":381}}],"name":"sqs2","ortholog_annotations":[{"gene_uniquename":"SJAG_01232","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11183","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01232","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24684","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01232","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1442.13c","reference_uniquename":"PMID:21511999"}],"product":"R3H and G-patch domain protein Sqs2","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0072686","GO:0005816","GO:0005634","GO:0042254","GO:0015630"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0042254":null,"GO:0044732":null,"GO:0072686":null,"MONDO:0014936":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01232.1"],"transcripts_by_uniquename":{"SJAG_01232.1":null},"uniprot_identifier":"B6K044","uniquename":"SJAG_01232"}


id: SJAG_01233
data:
  {"cv_annotations":{"biological_process":[{"annotations":[115062],"is_not":false,"summary":null,"term":"GO:0016024"},{"annotations":[115063],"is_not":false,"summary":null,"term":"GO:0071277"},{"annotations":[115064],"is_not":false,"summary":null,"term":"GO:0035865"},{"annotations":[67478],"is_not":false,"summary":null,"term":"GO:0006646"},{"annotations":[67477],"is_not":false,"summary":null,"term":"GO:0006659"},{"annotations":[115068],"is_not":false,"summary":null,"term":"GO:0007009"}],"cellular_component":[{"annotations":[115058],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[115060],"is_not":false,"summary":null,"term":"GO:0005789"},{"annotations":[115061],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[67472],"is_not":false,"summary":null,"term":"GO:0003882"}]},"dbxrefs":["GOA:B6K045","InterPro:IPR000462","InterPro:IPR004533","InterPro:IPR016271","UniProtKB/TrEMBL:B6K045","EnsemblGenomes-Gn:SJAG_01233","EnsemblGenomes-Tr:EEB06195"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mis14","uniquename":"SJAG_01228"},{"name":"vps1301","uniquename":"SJAG_01229"},{"name":"dep1","uniquename":"SJAG_01230"},{"name":"hnt1","uniquename":"SJAG_01231"},{"name":"sqs2","uniquename":"SJAG_01232"},{"name":"pps1","uniquename":"SJAG_01233"},{"name":"gar1","uniquename":"SJAG_01234"},{"name":"trs1","uniquename":"SJAG_01235"},{"name":"vac14","uniquename":"SJAG_01236"},{"uniquename":"SJAG_05222"},{"uniquename":"SJAG_01238"}],"genes_by_uniquename":{"HGNC:15463":null,"SJAG_01233":null,"SPCC1442.12":null,"YER026C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"CDP-alcohol phosphatidyltransferase","id":"PF01066","interpro_description":"CDP-alcohol phosphatidyltransferase","interpro_id":"IPR000462","interpro_name":"CDP-OH_P_trans","locations":[{"end":189,"start":38}],"match_end":189,"match_start":38,"name":"CDP-OH_P_transf"},{"dbname":"PROSITE_PATTERNS","description":"CDP-alcohol phosphatidyltransferases signature.","id":"PS00379","interpro_description":"CDP-alcohol phosphatidyltransferase, conserved site","interpro_id":"IPR048254","interpro_name":"CDP_ALCOHOL_P_TRANSF_CS","locations":[{"end":112,"start":90}],"match_end":112,"match_start":90,"name":"CDP_ALCOHOL_P_TRANSF"},{"dbname":"FUNFAM","description":"CDP-diacylglycerol--serine O-phosphatidyltransferase","id":"G3DSA:1.20.120.1760:FF:000022","locations":[{"end":227,"start":32}],"match_end":227,"match_start":32},{"dbname":"GENE3D","id":"G3DSA:1.20.120.1760","interpro_description":"CDP-alcohol phosphatidyltransferase, transmembrane domain","interpro_id":"IPR043130","interpro_name":"CDP-OH_PTrfase_TM_dom","locations":[{"end":231,"start":15}],"match_end":231,"match_start":15},{"dbname":"PANTHER","id":"PTHR14269","interpro_description":"CDP-alcohol phosphatidyltransferase class-I","interpro_id":"IPR050324","interpro_name":"CDP-alcohol_PTase-I","locations":[{"end":211,"start":31}],"match_end":211,"match_start":31,"name":"CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED"},{"dbname":"PIRSF","id":"PIRSF000852","interpro_description":"CDP-diacylglycerol--serine O-phosphatidyltransferase, fungal","interpro_id":"IPR016271","interpro_name":"CDP-diaglyc--ser_O-PTrfase_fun","locations":[{"end":235,"start":1}],"match_end":235,"match_start":1,"name":"Phosphatidylserin_synth_fung"},{"dbname":"NCBIFAM","description":"CDP-diacylglycerol--serine O-phosphatidyltransferase","id":"TIGR00473","interpro_description":"CDP-diacylglycerol--serine O-phosphatidyltransferase","interpro_id":"IPR004533","interpro_name":"CDP-diaglyc--ser_O-PTrfase","locations":[{"end":181,"start":47}],"match_end":181,"match_start":47,"name":"pssA"}],"location":{"chromosome_name":"supercont5.3","end_pos":1223304,"start_pos":1222354,"strand":"reverse"},"name":"pps1","ortholog_annotations":[{"gene_uniquename":"SJAG_01233","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15463","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01233","ortholog_taxonid":4896,"ortholog_uniquename":"SPCC1442.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01233","ortholog_taxonid":4932,"ortholog_uniquename":"YER026C","reference_uniquename":"PMID:29761456"}],"product":"CDP-diacylglycerol-serine O-phosphatidyltransferase Pps1","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003882"]}},"subset_termids":["GO:0006629","GO:0061024","GO:0005829","GO:0016780","GO:0005789","GO:0005783","GO:0005886"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003882":null,"GO:0005789":null,"GO:0005829":null,"GO:0005886":null,"GO:0006646":null,"GO:0006659":null,"GO:0007009":null,"GO:0016024":null,"GO:0035865":null,"GO:0071277":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01233.1"],"transcripts_by_uniquename":{"SJAG_01233.1":null},"uniprot_identifier":"B6K045","uniquename":"SJAG_01233"}


id: SJAG_01234
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74860],"is_not":false,"summary":null,"term":"GO:0000454"},{"annotations":[106653],"is_not":false,"summary":null,"term":"GO:0031120"}],"cellular_component":[{"annotations":[74859],"is_not":false,"summary":null,"term":"GO:0031429"}],"molecular_function":[{"annotations":[74858],"is_not":false,"summary":null,"term":"GO:0034513"}]},"dbxrefs":["InterPro:IPR038664","UniProtKB/TrEMBL:B6K046","EnsemblGenomes-Gn:SJAG_01234","EnsemblGenomes-Tr:EEB06196","InterPro:IPR007504","GOA:B6K046","InterPro:IPR009000"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":25,"start":1}},{"range":{"end":200,"start":118}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vps1301","uniquename":"SJAG_01229"},{"name":"dep1","uniquename":"SJAG_01230"},{"name":"hnt1","uniquename":"SJAG_01231"},{"name":"sqs2","uniquename":"SJAG_01232"},{"name":"pps1","uniquename":"SJAG_01233"},{"name":"gar1","uniquename":"SJAG_01234"},{"name":"trs1","uniquename":"SJAG_01235"},{"name":"vac14","uniquename":"SJAG_01236"},{"uniquename":"SJAG_05222"},{"uniquename":"SJAG_01238"},{"name":"rdl2","uniquename":"SJAG_01239"}],"genes_by_uniquename":{"HGNC:14264":null,"SJAG_01234":null,"SPBC20F10.01":null,"YHR089C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Gar1/Naf1 RNA binding region","id":"PF04410","interpro_description":"H/ACA ribonucleoprotein complex, subunit Gar1/Naf1","interpro_id":"IPR007504","interpro_name":"H/ACA_rnp_Gar1/Naf1","locations":[{"end":116,"start":30}],"match_end":116,"match_start":30,"name":"Gar1"},{"dbname":"FUNFAM","description":"H/ACA ribonucleoprotein complex subunit","id":"G3DSA:2.40.10.230:FF:000001","locations":[{"end":117,"start":26}],"match_end":117,"match_start":26},{"dbname":"SUPERFAMILY","id":"SSF50447","interpro_description":"Translation protein, beta-barrel domain superfamily","interpro_id":"IPR009000","interpro_name":"Transl_B-barrel_sf","locations":[{"end":104,"start":32}],"match_end":104,"match_start":32,"name":"Translation proteins"},{"dbname":"GENE3D","id":"G3DSA:2.40.10.230","interpro_description":"H/ACA RNP complex subunit Gar1/Naf1, Cbf5-binding domain","interpro_id":"IPR038664","interpro_name":"Gar1/Naf1_Cbf5-bd_sf","locations":[{"end":117,"start":26}],"match_end":117,"match_start":26,"name":"Probable tRNA pseudouridine synthase domain"},{"dbname":"PANTHER","id":"PTHR23237","locations":[{"end":195,"start":4}],"match_end":195,"match_start":4,"name":"NUCLEOLAR PROTEIN FAMILY A MEMBER 1  SNORNP PROTEIN GAR1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":25,"start":1},{"end":200,"start":118}],"match_end":200,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Glycine-rich","description":"consensus disorder prediction","id":"mobidb-lite-Glycine-rich","locations":[{"end":17,"start":1},{"end":200,"start":131}],"match_end":200,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1225001,"start_pos":1224204,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":18,"start":1}},{"range":{"end":127,"start":116}},{"range":{"end":199,"start":130}}],"name":"gar1","ortholog_annotations":[{"gene_uniquename":"SJAG_01234","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:14264","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01234","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC20F10.01","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01234","ortholog_taxonid":4932,"ortholog_uniquename":"YHR089C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01234","ortholog_taxonid":4932,"ortholog_uniquename":"YHR089C","reference_uniquename":"PMID:26896847"}],"product":"box H/ACA snoRNP complex subunit Gar1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0034513"]}},"subset_termids":["GO:0042254","GO:0005634","GO:0016073","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000454":null,"GO:0031120":null,"GO:0031429":null,"GO:0034513":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01234.1"],"transcripts_by_uniquename":{"SJAG_01234.1":null},"uniprot_identifier":"B6K046","uniquename":"SJAG_01234"}


id: SJAG_01235
data:
  {"cv_annotations":{"biological_process":[{"annotations":[107648],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[107647],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[58262],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[71226],"is_not":false,"summary":null,"term":"GO:0004829"}],"mondo":[{"annotations":[87309],"is_not":false,"summary":null,"term":"MONDO:0032806"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01235","InterPro:IPR012676","GOA:B6K047","UniProtKB/TrEMBL:B6K047","InterPro:IPR012947","InterPro:IPR004095","InterPro:IPR018163","InterPro:IPR012675","InterPro:IPR006195","InterPro:IPR004154","InterPro:IPR002314","InterPro:IPR036621","InterPro:IPR002320","InterPro:IPR033728","EnsemblGenomes-Tr:EEB06197"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dep1","uniquename":"SJAG_01230"},{"name":"hnt1","uniquename":"SJAG_01231"},{"name":"sqs2","uniquename":"SJAG_01232"},{"name":"pps1","uniquename":"SJAG_01233"},{"name":"gar1","uniquename":"SJAG_01234"},{"name":"trs1","uniquename":"SJAG_01235"},{"name":"vac14","uniquename":"SJAG_01236"},{"uniquename":"SJAG_05222"},{"uniquename":"SJAG_01238"},{"name":"rdl2","uniquename":"SJAG_01239"},{"name":"get3","uniquename":"SJAG_01240"}],"genes_by_uniquename":{"HGNC:11572":null,"HGNC:24728":null,"SJAG_01235":null,"SPBC25H2.02":null,"YIL078W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Anticodon binding domain","id":"PF03129","interpro_description":"Anticodon-binding","interpro_id":"IPR004154","interpro_name":"Anticodon-bd","locations":[{"end":688,"start":595}],"match_end":688,"match_start":595,"name":"HGTP_anticodon"},{"dbname":"PFAM","description":"Threonyl and Alanyl tRNA synthetase second additional domain","id":"PF07973","interpro_description":"Threonyl/alanyl tRNA synthetase, SAD","interpro_id":"IPR012947","interpro_name":"tRNA_SAD","locations":[{"end":262,"start":214}],"match_end":262,"match_start":214,"name":"tRNA_SAD"},{"dbname":"PFAM","description":"tRNA synthetase class II core domain (G, H, P, S and T)","id":"PF00587","interpro_description":"Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)","interpro_id":"IPR002314","interpro_name":"aa-tRNA-synt_IIb","locations":[{"end":583,"start":361}],"match_end":583,"match_start":361,"name":"tRNA-synt_2b"},{"dbname":"PFAM","description":"TGS domain","id":"PF02824","interpro_description":"TGS","interpro_id":"IPR004095","interpro_name":"TGS","locations":[{"end":104,"start":45}],"match_end":104,"match_start":45,"name":"TGS"},{"dbname":"CDD","description":"ThrRS_anticodon","id":"cd00860","interpro_description":"Threonine-tRNA ligase, class IIa, anticodon-binding domain","interpro_id":"IPR047246","interpro_name":"ThrRS_anticodon","locations":[{"end":687,"start":593}],"match_end":687,"match_start":593,"name":"ThrRS_anticodon"},{"dbname":"CDD","description":"TGS_ThrRS","id":"cd01667","locations":[{"end":110,"start":45}],"match_end":110,"match_start":45,"name":"TGS_ThrRS"},{"dbname":"CDD","description":"ThrRS_core","id":"cd00771","interpro_description":"Threonine-tRNA ligase catalytic core domain","interpro_id":"IPR033728","interpro_name":"ThrRS_core","locations":[{"end":593,"start":285}],"match_end":593,"match_start":285,"name":"ThrRS_core"},{"dbname":"PROSITE_PROFILES","description":"Aminoacyl-transfer RNA synthetases class-II family profile.","id":"PS50862","interpro_description":"Aminoacyl-tRNA synthetase, class II","interpro_id":"IPR006195","interpro_name":"aa-tRNA-synth_II","locations":[{"end":588,"start":311}],"match_end":588,"match_start":311,"name":"AA_TRNA_LIGASE_II"},{"dbname":"PROSITE_PROFILES","description":"TGS domain profile.","id":"PS51880","interpro_description":"TGS","interpro_id":"IPR004095","interpro_name":"TGS","locations":[{"end":105,"start":43}],"match_end":105,"match_start":43,"name":"TGS"},{"dbname":"SMART","id":"SM00863","interpro_description":"Threonyl/alanyl tRNA synthetase, SAD","interpro_id":"IPR012947","interpro_name":"tRNA_SAD","locations":[{"end":262,"start":213}],"match_end":262,"match_start":213,"name":"tRNA_SAD_4"},{"dbname":"PRINTS","description":"Threonyl-tRNA synthetase signature","id":"PR01047","interpro_description":"Threonine-tRNA ligase, class IIa","interpro_id":"IPR002320","interpro_name":"Thr-tRNA-ligase_IIa","locations":[{"end":400,"start":372},{"end":428,"start":405},{"end":535,"start":507},{"end":574,"start":561},{"end":600,"start":588}],"match_end":600,"match_start":372,"name":"TRNASYNTHTHR"},{"dbname":"FUNFAM","description":"Threonyl-tRNA synthetase, mitochondrial","id":"G3DSA:3.30.980.10:FF:000005","locations":[{"end":266,"start":109}],"match_end":266,"match_start":109},{"dbname":"FUNFAM","description":"Threonine--tRNA ligase 2, cytoplasmic","id":"G3DSA:3.30.930.10:FF:000009","locations":[{"end":586,"start":268}],"match_end":586,"match_start":268},{"dbname":"FUNFAM","description":"Threonine--tRNA ligase 2, cytoplasmic","id":"G3DSA:3.40.50.800:FF:000003","locations":[{"end":699,"start":587}],"match_end":699,"match_start":587},{"dbname":"FUNFAM","description":"Threonine--tRNA ligase, cytoplasmic","id":"G3DSA:3.10.20.30:FF:000006","locations":[{"end":104,"start":43}],"match_end":104,"match_start":43},{"dbname":"SUPERFAMILY","id":"SSF55186","interpro_description":"Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily","interpro_id":"IPR018163","interpro_name":"Thr/Ala-tRNA-synth_IIc_edit","locations":[{"end":284,"start":107}],"match_end":284,"match_start":107,"name":"ThrRS/AlaRS common domain"},{"dbname":"SUPERFAMILY","id":"SSF52954","locations":[{"end":690,"start":581}],"match_end":690,"match_start":581,"name":"Class II aaRS ABD-related"},{"dbname":"SUPERFAMILY","id":"SSF55681","interpro_description":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_id":"IPR045864","interpro_name":"aa-tRNA-synth_II/BPL/LPL","locations":[{"end":579,"start":286}],"match_end":579,"match_start":286,"name":"Class II aaRS and biotin synthetases"},{"dbname":"SUPERFAMILY","id":"SSF81271","interpro_description":"TGS-like","interpro_id":"IPR012676","interpro_name":"TGS-like","locations":[{"end":105,"start":45}],"match_end":105,"match_start":45,"name":"TGS-like"},{"dbname":"GENE3D","id":"G3DSA:3.30.980.10","locations":[{"end":266,"start":109}],"match_end":266,"match_start":109},{"dbname":"GENE3D","id":"G3DSA:3.40.50.800","interpro_description":"Anticodon-binding domain superfamily","interpro_id":"IPR036621","interpro_name":"Anticodon-bd_dom_sf","locations":[{"end":698,"start":587}],"match_end":698,"match_start":587},{"dbname":"GENE3D","id":"G3DSA:3.10.20.30","interpro_description":"Beta-grasp domain superfamily","interpro_id":"IPR012675","interpro_name":"Beta-grasp_dom_sf","locations":[{"end":104,"start":43}],"match_end":104,"match_start":43},{"dbname":"GENE3D","id":"G3DSA:3.30.930.10","interpro_description":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_id":"IPR045864","interpro_name":"aa-tRNA-synth_II/BPL/LPL","locations":[{"end":586,"start":268}],"match_end":586,"match_start":268,"name":"Bira Bifunctional Protein; Domain 2"},{"dbname":"PANTHER","id":"PTHR11451","locations":[{"end":693,"start":30}],"match_end":693,"match_start":30,"name":"THREONINE-TRNA LIGASE"},{"dbname":"HAMAP","description":"Threonine--tRNA ligase [thrS].","id":"MF_00184","interpro_description":"Threonine-tRNA ligase, class IIa","interpro_id":"IPR002320","interpro_name":"Thr-tRNA-ligase_IIa","locations":[{"end":688,"start":110}],"match_end":688,"match_start":110,"name":"Thr_tRNA_synth"},{"dbname":"NCBIFAM","description":"threonine--tRNA ligase","id":"TIGR00418","interpro_description":"Threonine-tRNA ligase, class IIa","interpro_id":"IPR002320","interpro_name":"Thr-tRNA-ligase_IIa","locations":[{"end":687,"start":116}],"match_end":687,"match_start":116,"name":"thrS"}],"location":{"chromosome_name":"supercont5.3","end_pos":1227543,"start_pos":1225444,"strand":"forward"},"name":"trs1","ortholog_annotations":[{"gene_uniquename":"SJAG_01235","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11572","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01235","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24728","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01235","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC25H2.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01235","ortholog_taxonid":4932,"ortholog_uniquename":"YIL078W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01235","ortholog_taxonid":4932,"ortholog_uniquename":"YIL078W","reference_uniquename":"PMID:26896847"}],"product":"cytoplasmic threonine-tRNA ligase Trs1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004829"]}},"subset_termids":["GO:0140098","GO:0005829","GO:0002181","MONDO:0005093","GO:0016874","GO:0140101"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0004829":null,"GO:0005524":null,"GO:0005829":null,"MONDO:0032806":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01235.1"],"transcripts_by_uniquename":{"SJAG_01235.1":null},"uniprot_identifier":"B6K047","uniquename":"SJAG_01235"}


id: SJAG_01236
data:
  {"cv_annotations":{"biological_process":[{"annotations":[80589],"is_not":false,"summary":null,"term":"GO:0006661"}],"cellular_component":[{"annotations":[80588],"is_not":false,"summary":null,"term":"GO:0010008"},{"annotations":[80587],"is_not":false,"summary":null,"term":"GO:0000329"},{"annotations":[80590],"is_not":false,"summary":null,"term":"GO:0070772"}],"mondo":[{"annotations":[86454],"is_not":false,"summary":null,"term":"MONDO:0014889"}]},"dbxrefs":["InterPro:IPR021841","EnsemblGenomes-Gn:SJAG_01236","InterPro:IPR032878","EnsemblGenomes-Tr:EEB06198","GOA:B6K048","InterPro:IPR016024","InterPro:IPR026825","UniProtKB/TrEMBL:B6K048"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"hnt1","uniquename":"SJAG_01231"},{"name":"sqs2","uniquename":"SJAG_01232"},{"name":"pps1","uniquename":"SJAG_01233"},{"name":"gar1","uniquename":"SJAG_01234"},{"name":"trs1","uniquename":"SJAG_01235"},{"name":"vac14","uniquename":"SJAG_01236"},{"uniquename":"SJAG_05222"},{"uniquename":"SJAG_01238"},{"name":"rdl2","uniquename":"SJAG_01239"},{"name":"get3","uniquename":"SJAG_01240"},{"uniquename":"SJAG_01241"}],"genes_by_uniquename":{"HGNC:25507":null,"SJAG_01236":null,"SPBC25H2.03":null,"YLR386W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Vacuolar protein 14 C-terminal Fig4p binding","id":"PF11916","interpro_description":"Vacuolar protein 14, C-terminal Fig4-binding domain","interpro_id":"IPR021841","interpro_name":"VAC14_Fig4p-bd","locations":[{"end":711,"start":570}],"match_end":711,"match_start":570,"name":"Vac14_Fig4_bd"},{"dbname":"PFAM","description":"Vacuolar 14 Fab1-binding region","id":"PF12755","locations":[{"end":197,"start":104}],"match_end":197,"match_start":104,"name":"Vac14_Fab1_bd"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":200,"start":48},{"end":325,"start":239},{"end":668,"start":382}],"match_end":668,"match_start":48,"name":"ARM repeat"},{"dbname":"GENE3D","id":"G3DSA:1.25.10.10","interpro_description":"Armadillo-like helical","interpro_id":"IPR011989","interpro_name":"ARM-like","locations":[{"end":175,"start":47},{"end":329,"start":258},{"end":570,"start":355}],"match_end":570,"match_start":47},{"dbname":"PANTHER","id":"PTHR16023","interpro_description":"Vacuole morphology and inheritance protein 14","interpro_id":"IPR026825","interpro_name":"Vac14","locations":[{"end":608,"start":47}],"match_end":608,"match_start":47,"name":"TAX1 BINDING PROTEIN-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":1230787,"start_pos":1227783,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":118,"start":101}},{"range":{"end":492,"start":483}},{"range":{"end":662,"start":650}},{"range":{"end":786,"start":760}}],"name":"vac14","ortholog_annotations":[{"gene_uniquename":"SJAG_01236","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25507","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01236","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC25H2.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01236","ortholog_taxonid":4932,"ortholog_uniquename":"YLR386W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01236","ortholog_taxonid":4932,"ortholog_uniquename":"YLR386W","reference_uniquename":"PMID:26896847"}],"product":"PAS complex subunit, involved in phosphoinositide metabolism Vac14","references_by_uniquename":{"GO_REF:0000033":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["MONDO:0021179","GO:0031410","GO:0005768","GO:0006629","GO:0005773","MONDO:0003441","MONDO:0005559","MONDO:0005066"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000329":null,"GO:0006661":null,"GO:0010008":null,"GO:0070772":null,"MONDO:0014889":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":125,"start":103}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01236.1"],"transcripts_by_uniquename":{"SJAG_01236.1":null},"uniprot_identifier":"B6K048","uniquename":"SJAG_01236"}


id: SJAG_01238
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98590],"is_not":false,"summary":null,"term":"GO:0044571"},{"annotations":[64297],"is_not":false,"summary":null,"term":"GO:0006633"}],"cellular_component":[{"annotations":[98587],"is_not":false,"summary":null,"term":"GO:0099128"},{"annotations":[98588],"is_not":false,"summary":null,"term":"GO:0005759"}],"molecular_function":[{"annotations":[76107],"is_not":false,"summary":null,"term":"GO:0000035"},{"annotations":[76108],"is_not":false,"summary":null,"term":"GO:0000036"}]},"dbxrefs":["InterPro:IPR009081","GOA:B6K050","InterPro:IPR006162","EnsemblGenomes-Tr:EEB06200","EnsemblGenomes-Gn:SJAG_01238","InterPro:IPR003231","InterPro:IPR036736","UniProtKB/TrEMBL:B6K050"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"pps1","uniquename":"SJAG_01233"},{"name":"gar1","uniquename":"SJAG_01234"},{"name":"trs1","uniquename":"SJAG_01235"},{"name":"vac14","uniquename":"SJAG_01236"},{"uniquename":"SJAG_05222"},{"uniquename":"SJAG_01238"},{"name":"rdl2","uniquename":"SJAG_01239"},{"name":"get3","uniquename":"SJAG_01240"},{"uniquename":"SJAG_01241"},{"name":"vps32","uniquename":"SJAG_01242"},{"name":"fhl1","uniquename":"SJAG_01243"}],"genes_by_uniquename":{"HGNC:7694":null,"SJAG_01238":null,"SPAC4H3.09":null,"YKL192C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Phosphopantetheine attachment site","id":"PF00550","interpro_description":"Phosphopantetheine binding ACP domain","interpro_id":"IPR009081","interpro_name":"PP-bd_ACP","locations":[{"end":103,"start":35}],"match_end":103,"match_start":35,"name":"PP-binding"},{"dbname":"PROSITE_PATTERNS","description":"Phosphopantetheine attachment site.","id":"PS00012","interpro_description":"Phosphopantetheine attachment site","interpro_id":"IPR006162","interpro_name":"Ppantetheine_attach_site","locations":[{"end":77,"start":62}],"match_end":77,"match_start":62,"name":"PHOSPHOPANTETHEINE"},{"dbname":"PROSITE_PROFILES","description":"Carrier protein (CP) domain profile.","id":"PS50075","interpro_description":"Phosphopantetheine binding ACP domain","interpro_id":"IPR009081","interpro_name":"PP-bd_ACP","locations":[{"end":107,"start":30}],"match_end":107,"match_start":30,"name":"CARRIER"},{"dbname":"FUNFAM","description":"Acyl carrier protein","id":"G3DSA:1.10.1200.10:FF:000003","locations":[{"end":109,"start":19}],"match_end":109,"match_start":19},{"dbname":"SUPERFAMILY","id":"SSF47336","interpro_description":"ACP-like superfamily","interpro_id":"IPR036736","interpro_name":"ACP-like_sf","locations":[{"end":106,"start":27}],"match_end":106,"match_start":27,"name":"ACP-like"},{"dbname":"GENE3D","id":"G3DSA:1.10.1200.10","interpro_description":"ACP-like superfamily","interpro_id":"IPR036736","interpro_name":"ACP-like_sf","locations":[{"end":110,"start":24}],"match_end":110,"match_start":24},{"dbname":"PANTHER","id":"PTHR20863","interpro_description":"Acyl carrier protein","interpro_id":"IPR003231","interpro_name":"ACP","locations":[{"end":108,"start":28}],"match_end":108,"match_start":28,"name":"ACYL CARRIER PROTEIN"},{"dbname":"HAMAP","description":"Acyl carrier protein [acpP].","id":"MF_01217","interpro_description":"Acyl carrier protein","interpro_id":"IPR003231","interpro_name":"ACP","locations":[{"end":107,"start":31}],"match_end":107,"match_start":31,"name":"Acyl_carrier"},{"dbname":"NCBIFAM","description":"acyl carrier protein","id":"TIGR00517","interpro_description":"Acyl carrier protein","interpro_id":"IPR003231","interpro_name":"ACP","locations":[{"end":106,"start":34}],"match_end":106,"match_start":34,"name":"acyl_carrier"},{"dbname":"NCBIFAM","description":"acyl carrier protein","id":"NF002148","locations":[{"end":107,"start":33}],"match_end":107,"match_start":33,"name":"PRK00982.1-2"}],"location":{"chromosome_name":"supercont5.3","end_pos":1232391,"start_pos":1231933,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_01238","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7694","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01238","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4H3.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01238","ortholog_taxonid":4932,"ortholog_uniquename":"YKL192C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01238","ortholog_taxonid":4932,"ortholog_uniquename":"YKL192C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial [2Fe-2S] cluster assembly and type II fatty acid synthase acyl carrier protein","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000035","GO:0000036"]}},"subset_termids":["GO:0005829","GO:0016226","GO:0005739","GO:0140104","GO:0006629"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000035":null,"GO:0000036":null,"GO:0005759":null,"GO:0006633":null,"GO:0044571":null,"GO:0099128":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01238.1"],"transcripts_by_uniquename":{"SJAG_01238.1":null},"uniprot_identifier":"B6K050","uniquename":"SJAG_01238"}


id: SJAG_01239
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[70168],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[70167],"is_not":false,"summary":null,"term":"GO:0004792"}]},"dbxrefs":["InterPro:IPR001763","InterPro:IPR036873","UniProtKB/TrEMBL:B6K051","EnsemblGenomes-Tr:EEB06201","EnsemblGenomes-Gn:SJAG_01239"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gar1","uniquename":"SJAG_01234"},{"name":"trs1","uniquename":"SJAG_01235"},{"name":"vac14","uniquename":"SJAG_01236"},{"uniquename":"SJAG_05222"},{"uniquename":"SJAG_01238"},{"name":"rdl2","uniquename":"SJAG_01239"},{"name":"get3","uniquename":"SJAG_01240"},{"uniquename":"SJAG_01241"},{"name":"vps32","uniquename":"SJAG_01242"},{"name":"fhl1","uniquename":"SJAG_01243"},{"name":"cgs1","uniquename":"SJAG_01245"}],"genes_by_uniquename":{"HGNC:35410":null,"SJAG_01239":null,"SPAC4H3.07c":null,"YOR285W":null,"YOR286W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Rhodanese-like domain","id":"PF00581","interpro_description":"Rhodanese-like domain","interpro_id":"IPR001763","interpro_name":"Rhodanese-like_dom","locations":[{"end":147,"start":41}],"match_end":147,"match_start":41,"name":"Rhodanese"},{"dbname":"CDD","description":"RHOD_HSP67B2","id":"cd01519","locations":[{"end":147,"start":39}],"match_end":147,"match_start":39,"name":"RHOD_HSP67B2"},{"dbname":"PROSITE_PROFILES","description":"Rhodanese domain profile.","id":"PS50206","interpro_description":"Rhodanese-like domain","interpro_id":"IPR001763","interpro_name":"Rhodanese-like_dom","locations":[{"end":150,"start":53}],"match_end":150,"match_start":53,"name":"RHODANESE_3"},{"dbname":"SMART","id":"SM00450","interpro_description":"Rhodanese-like domain","interpro_id":"IPR001763","interpro_name":"Rhodanese-like_dom","locations":[{"end":151,"start":43}],"match_end":151,"match_start":43,"name":"rhod_4"},{"dbname":"SUPERFAMILY","id":"SSF52821","interpro_description":"Rhodanese-like domain superfamily","interpro_id":"IPR036873","interpro_name":"Rhodanese-like_dom_sf","locations":[{"end":149,"start":24}],"match_end":149,"match_start":24,"name":"Rhodanese/Cell cycle control phosphatase"},{"dbname":"GENE3D","id":"G3DSA:3.40.250.10","interpro_description":"Rhodanese-like domain superfamily","interpro_id":"IPR036873","interpro_name":"Rhodanese-like_dom_sf","locations":[{"end":151,"start":33}],"match_end":151,"match_start":33},{"dbname":"PANTHER","id":"PTHR44086","locations":[{"end":151,"start":33}],"match_end":151,"match_start":33,"name":"THIOSULFATE SULFURTRANSFERASE RDL2, MITOCHONDRIAL-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":1233150,"start_pos":1232692,"strand":"forward"},"name":"rdl2","ortholog_annotations":[{"gene_uniquename":"SJAG_01239","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:35410","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01239","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4H3.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01239","ortholog_taxonid":4932,"ortholog_uniquename":"YOR285W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01239","ortholog_taxonid":4932,"ortholog_uniquename":"YOR285W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01239","ortholog_taxonid":4932,"ortholog_uniquename":"YOR286W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01239","ortholog_taxonid":4932,"ortholog_uniquename":"YOR286W","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial thiosulfate sulfurtransferase/rhodanese-like domain Rdl2","references_by_uniquename":{"GO_REF:0000033":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004792"]}},"subset_termids":["GO:0016782","GO:0005739"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004792":null,"GO:0005739":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01239.1"],"transcripts_by_uniquename":{"SJAG_01239.1":null},"uniprot_identifier":"B6K051","uniquename":"SJAG_01239"}


id: SJAG_01240
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":56,"start":56}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":34,"start":27}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":231,"start":231}},{"assigned_by":"UniProtKB","ligand":"ATP","range":{"end":258,"start":258}},{"assigned_by":"UniProtKB","ligand":"Zn(2+)","range":{"end":268,"start":268}},{"assigned_by":"UniProtKB","ligand":"Zn(2+)","range":{"end":271,"start":271}}],"chains":[{"assigned_by":"UniProtKB","range":{"end":324,"start":1}}],"cv_annotations":{"biological_process":[{"annotations":[75402],"is_not":false,"summary":null,"term":"GO:0071816"}],"cellular_component":[{"annotations":[88262],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[75401],"is_not":false,"summary":null,"term":"GO:0043529"},{"annotations":[88264],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[63413],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[75400],"is_not":false,"summary":null,"term":"GO:0016887"},{"annotations":[88268],"is_not":false,"summary":null,"term":"GO:0140597"}],"mondo":[{"annotations":[85888],"is_not":false,"summary":null,"term":"MONDO:0859358"}]},"dbxrefs":["UniProtKB/Swiss-Prot:B6K052","InterPro:IPR016300","InterPro:IPR027417","InterPro:IPR025723","InterPro:IPR027542","EnsemblGenomes-Gn:SJAG_01240","EnsemblGenomes-Tr:EEB06202","GOA:B6K052"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"trs1","uniquename":"SJAG_01235"},{"name":"vac14","uniquename":"SJAG_01236"},{"uniquename":"SJAG_05222"},{"uniquename":"SJAG_01238"},{"name":"rdl2","uniquename":"SJAG_01239"},{"name":"get3","uniquename":"SJAG_01240"},{"uniquename":"SJAG_01241"},{"name":"vps32","uniquename":"SJAG_01242"},{"name":"fhl1","uniquename":"SJAG_01243"},{"name":"cgs1","uniquename":"SJAG_01245"},{"uniquename":"SJAG_01246"}],"genes_by_uniquename":{"HGNC:752":null,"SJAG_01240":null,"SPAC1142.06":null,"YDL100C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Anion-transporting ATPase","id":"PF02374","interpro_description":"Anion-transporting ATPase-like domain","interpro_id":"IPR025723","interpro_name":"Anion-transp_ATPase-like_dom","locations":[{"end":318,"start":20}],"match_end":318,"match_start":20,"name":"ArsA_ATPase"},{"dbname":"CDD","description":"ArsA","id":"cd02035","locations":[{"end":314,"start":36}],"match_end":314,"match_start":36,"name":"ArsA"},{"dbname":"FUNFAM","description":"ATPase ASNA1","id":"G3DSA:3.40.50.300:FF:000235","locations":[{"end":324,"start":1}],"match_end":324,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":313,"start":16}],"match_end":313,"match_start":16,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":324,"start":1}],"match_end":324,"match_start":1},{"dbname":"PANTHER","id":"PTHR10803","interpro_description":"Arsenical pump ATPase, ArsA/GET3","interpro_id":"IPR016300","interpro_name":"ATPase_ArsA/GET3","locations":[{"end":321,"start":15}],"match_end":321,"match_start":15,"name":"ARSENICAL PUMP-DRIVING ATPASE  ARSENITE-TRANSLOCATING ATPASE"},{"dbname":"HAMAP","description":"ATPase <gene_name> [GET3].","id":"MF_03112","interpro_description":"Arsenical pump ATPase, ArsA/GET3, eukaryotic","interpro_id":"IPR027542","interpro_name":"ATPase_ArsA/GET3_euk","locations":[{"end":324,"start":6}],"match_end":324,"match_start":6,"name":"Asna1_Get3"},{"dbname":"NCBIFAM","description":"TRC40/GET3/ArsA family transport-energizing ATPase","id":"TIGR00345","interpro_description":"Arsenical pump ATPase, ArsA/GET3","interpro_id":"IPR016300","interpro_name":"ATPase_ArsA/GET3","locations":[{"end":317,"start":23}],"match_end":317,"match_start":23,"name":"GET3_arsA_TRC40"}],"location":{"chromosome_name":"supercont5.3","end_pos":1234367,"start_pos":1233393,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":34,"start":23}}],"name":"get3","ortholog_annotations":[{"gene_uniquename":"SJAG_01240","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:752","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01240","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1142.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01240","ortholog_taxonid":4932,"ortholog_uniquename":"YDL100C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01240","ortholog_taxonid":4932,"ortholog_uniquename":"YDL100C","reference_uniquename":"PMID:26896847"}],"product":"GET complex (ER membrane insertion) ATPase subunit Get3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0016887","GO:0140597"]}},"subset_termids":["GO:0016887","GO:0140104","GO:0005634","GO:0005783","MONDO:0005267","GO:0061024","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005634":null,"GO:0005829":null,"GO:0016887":null,"GO:0043529":null,"GO:0071816":null,"GO:0140597":null,"MONDO:0859358":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01240.1"],"transcripts_by_uniquename":{"SJAG_01240.1":null},"uniprot_identifier":"B6K052","uniquename":"SJAG_01240"}


id: SJAG_01241
data:
  {"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Tr:EEB06203","UniProtKB/TrEMBL:B6K053","InterPro:IPR018946","EnsemblGenomes-Gn:SJAG_01241","InterPro:IPR038607","GOA:B6K053"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vac14","uniquename":"SJAG_01236"},{"uniquename":"SJAG_05222"},{"uniquename":"SJAG_01238"},{"name":"rdl2","uniquename":"SJAG_01239"},{"name":"get3","uniquename":"SJAG_01240"},{"uniquename":"SJAG_01241"},{"name":"vps32","uniquename":"SJAG_01242"},{"name":"fhl1","uniquename":"SJAG_01243"},{"name":"cgs1","uniquename":"SJAG_01245"},{"uniquename":"SJAG_01246"},{"uniquename":"SJAG_01247"}],"genes_by_uniquename":{"SJAG_01241":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PhoD-like phosphatase","id":"PF09423","interpro_description":"PhoD-like phosphatase, metallophosphatase domain","interpro_id":"IPR018946","interpro_name":"PhoD-like_MPP","locations":[{"end":455,"start":349}],"match_end":455,"match_start":349,"name":"PhoD"},{"dbname":"PROSITE_PROFILES","description":"Prokaryotic membrane lipoprotein lipid attachment site profile.","id":"PS51257","locations":[{"end":17,"start":1}],"match_end":17,"match_start":1,"name":"PROKAR_LIPOPROTEIN"},{"dbname":"SUPERFAMILY","id":"SSF56300","interpro_description":"Metallo-dependent phosphatase-like","interpro_id":"IPR029052","interpro_name":"Metallo-depent_PP-like","locations":[{"end":501,"start":207}],"match_end":501,"match_start":207,"name":"Metallo-dependent phosphatases"},{"dbname":"GENE3D","id":"G3DSA:3.60.21.70","interpro_description":"PhoD-like superfamily","interpro_id":"IPR038607","interpro_name":"PhoD-like_sf","locations":[{"end":490,"start":213}],"match_end":490,"match_start":213},{"dbname":"PANTHER","id":"PTHR43606","interpro_description":"Phospholipid Metabolizing Enzymes","interpro_id":"IPR052900","interpro_name":"Phospholipid_Metab_Enz","locations":[{"end":501,"start":6}],"match_end":501,"match_start":6,"name":"PHOSPHATASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_6G08710)-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":1236349,"start_pos":1234812,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":391,"start":373}}],"product":"PhoD-like superfamily","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":27,"start":5}},{"assigned_by":"TMHMM","range":{"end":51,"start":34}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01241.1"],"transcripts_by_uniquename":{"SJAG_01241.1":null},"uniprot_identifier":"B6K053","uniquename":"SJAG_01241"}


id: SJAG_01242
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"}},"coiled_coil_coords":[{"range":{"end":52,"start":29}},{"range":{"end":88,"start":68}}],"cv_annotations":{"biological_process":[{"annotations":[119697],"is_not":false,"summary":null,"term":"GO:0007084"},{"annotations":[88276],"is_not":false,"summary":null,"term":"GO:0043328"},{"annotations":[76637],"is_not":false,"summary":null,"term":"GO:0006900"}],"cellular_component":[{"annotations":[76636],"is_not":false,"summary":null,"term":"GO:0009898"},{"annotations":[76638],"is_not":false,"summary":null,"term":"GO:0000815"},{"annotations":[119683],"is_not":false,"summary":null,"term":"GO:0044732"},{"annotations":[88272],"is_not":false,"summary":null,"term":"GO:0180028"},{"annotations":[76635],"is_not":false,"summary":null,"term":"GO:0005771"},{"annotations":[119684],"is_not":false,"summary":null,"term":"GO:0005635"}],"mondo":[{"annotations":[87260],"is_not":false,"summary":null,"term":"MONDO:0011547"}],"single_locus_phenotype":[{"annotations":[119687,119974],"is_not":false,"summary":null,"term":"FYPO:0007772"},{"annotations":[119689,120007],"is_not":false,"summary":null,"term":"FYPO:0001234"}]},"dbxrefs":["InterPro:IPR005024","GOA:B6K054","UniProtKB/TrEMBL:B6K054","EnsemblGenomes-Gn:SJAG_01242","EnsemblGenomes-Tr:EEB06204"],"deletion_viability":"viable","disordered_region_coords":[{"range":{"end":208,"start":179}}],"feature_publications":[{"reference_uniquename":"PMID:32243490","source":"canto"},{"reference_uniquename":"PMID:32109380","source":"canto"}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_05222"},{"uniquename":"SJAG_01238"},{"name":"rdl2","uniquename":"SJAG_01239"},{"name":"get3","uniquename":"SJAG_01240"},{"uniquename":"SJAG_01241"},{"name":"vps32","uniquename":"SJAG_01242"},{"name":"fhl1","uniquename":"SJAG_01243"},{"name":"cgs1","uniquename":"SJAG_01245"},{"uniquename":"SJAG_01246"},{"uniquename":"SJAG_01247"},{"name":"dtd1","uniquename":"SJAG_01248"}],"genes_by_uniquename":{"HGNC:16171":null,"HGNC:20274":null,"HGNC:30599":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01745":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_05207":null,"SPAC1142.07c":null,"YLR025W":null},"genetic_interactions":[[{"gene_a_uniquename":"SJAG_01242","gene_b_uniquename":"SJAG_03891","interaction_type":"Phenotypic Enhancement"},[{"annotation_date":"2021-07-09","reference_uniquename":"PMID:32243490","source_database":"JaponicusDB","throughput":"low"}]],[{"gene_a_uniquename":"SJAG_01242","gene_b_uniquename":"SJAG_01050","interaction_type":"Phenotypic Suppression"},[{"annotation_date":"2021-07-09","reference_uniquename":"PMID:32243490","source_database":"JaponicusDB","throughput":"low"}]],[{"gene_a_uniquename":"SJAG_01242","gene_b_uniquename":"SJAG_01745","interaction_type":"Phenotypic Suppression"},[{"annotation_date":"2021-07-09","reference_uniquename":"PMID:32243490","source_database":"JaponicusDB","throughput":"low"}]]],"genotypes_by_uniquename":{"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]}},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Snf7","id":"PF03357","interpro_description":"Snf7 family","interpro_id":"IPR005024","interpro_name":"Snf7_fam","locations":[{"end":192,"start":21}],"match_end":192,"match_start":21,"name":"Snf7"},{"dbname":"GENE3D","id":"G3DSA:1.10.287.1060","locations":[{"end":93,"start":15}],"match_end":93,"match_start":15},{"dbname":"GENE3D","id":"G3DSA:6.10.250.1710","locations":[{"end":173,"start":119}],"match_end":173,"match_start":119},{"dbname":"PANTHER","id":"PTHR22761","interpro_description":"Snf7 family","interpro_id":"IPR005024","interpro_name":"Snf7_fam","locations":[{"end":202,"start":20}],"match_end":202,"match_start":20,"name":"CHARGED MULTIVESICULAR BODY PROTEIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":52,"start":29},{"end":88,"start":68}],"match_end":88,"match_start":29,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":208,"start":179}],"match_end":208,"match_start":179,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1237323,"start_pos":1236582,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":45,"start":33}},{"range":{"end":68,"start":52}},{"range":{"end":172,"start":153}}],"name":"vps32","ortholog_annotations":[{"gene_uniquename":"SJAG_01242","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16171","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01242","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20274","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01242","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30599","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01242","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1142.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01242","ortholog_taxonid":4932,"ortholog_uniquename":"YLR025W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01242","ortholog_taxonid":4932,"ortholog_uniquename":"YLR025W","reference_uniquename":"PMID:26896847"}],"physical_interactions":[{"annotation_date":"2021-06-17","evidence":"Reconstituted Complex","gene_uniquename":"SJAG_01242","interactor_uniquename":"SJAG_03892","reference_uniquename":"PMID:32109380","source_database":"JaponicusDB","throughput":"low"},{"annotation_date":"2021-06-17","evidence":"Reconstituted Complex","gene_uniquename":"SJAG_05207","interactor_uniquename":"SJAG_01242","reference_uniquename":"PMID:32109380","source_database":"JaponicusDB","throughput":"low"}],"product":"ESCRT III complex subunit Vps32","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:32109380":null,"PMID:32243490":null},"split_by_parent_groups":{"single_locus_phenotype":{"cell_phenotype":["FYPO:0007772"],"population_phenotype":["FYPO:0001234"]}},"subset_termids":["GO:0016192","MONDO:0005328","GO:0015630","GO:0061024","GO:0005816","GO:0005634","FYPO:0000139","FYPO:0002058","GO:0005886","GO:0005768","GO:0031410","FYPO:0001320","GO:0030163"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"FYPO:0001234":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"GO:0000815":null,"GO:0005635":null,"GO:0005771":null,"GO:0006900":null,"GO:0007084":null,"GO:0009898":null,"GO:0043328":null,"GO:0044732":null,"GO:0180028":null,"MONDO:0011547":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01242.1"],"transcripts_by_uniquename":{"SJAG_01242.1":null},"uniprot_identifier":"B6K054","uniquename":"SJAG_01242"}


id: SJAG_01243
data:
  {"cv_annotations":{"biological_process":[{"annotations":[88279],"is_not":false,"summary":null,"term":"GO:0060963"}],"cellular_component":[{"annotations":[69544],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[88281],"is_not":false,"summary":null,"term":"GO:0001228"},{"annotations":[80263],"is_not":false,"summary":null,"term":"GO:0000978"}]},"dbxrefs":["InterPro:IPR001766","GOA:B6K055","InterPro:IPR036390","InterPro:IPR000253","EnsemblGenomes-Tr:EEB06205","InterPro:IPR036388","UniProtKB/TrEMBL:B6K055","EnsemblGenomes-Gn:SJAG_01243","InterPro:IPR008984"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":183,"start":157}},{"range":{"end":270,"start":245}},{"range":{"end":492,"start":424}},{"range":{"end":627,"start":593}},{"range":{"end":706,"start":655}},{"range":{"end":799,"start":745}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01238"},{"name":"rdl2","uniquename":"SJAG_01239"},{"name":"get3","uniquename":"SJAG_01240"},{"uniquename":"SJAG_01241"},{"name":"vps32","uniquename":"SJAG_01242"},{"name":"fhl1","uniquename":"SJAG_01243"},{"name":"cgs1","uniquename":"SJAG_01245"},{"uniquename":"SJAG_01246"},{"uniquename":"SJAG_01247"},{"name":"dtd1","uniquename":"SJAG_01248"},{"name":"ppr4","uniquename":"SJAG_01249"}],"genes_by_uniquename":{"SJAG_01243":null,"SPAC1142.08":null,"YPR104C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"FHA domain","id":"PF00498","interpro_description":"Forkhead-associated (FHA) domain","interpro_id":"IPR000253","interpro_name":"FHA_dom","locations":[{"end":140,"start":68}],"match_end":140,"match_start":68,"name":"FHA"},{"dbname":"PFAM","description":"Forkhead domain","id":"PF00250","interpro_description":"Fork head domain","interpro_id":"IPR001766","interpro_name":"Fork_head_dom","locations":[{"end":421,"start":337}],"match_end":421,"match_start":337,"name":"Forkhead"},{"dbname":"CDD","description":"FHA_FKH1-like","id":"cd22701","locations":[{"end":149,"start":50}],"match_end":149,"match_start":50,"name":"FHA_FKH1-like"},{"dbname":"PROSITE_PROFILES","description":"Fork head domain profile.","id":"PS50039","interpro_description":"Fork head domain","interpro_id":"IPR001766","interpro_name":"Fork_head_dom","locations":[{"end":431,"start":337}],"match_end":431,"match_start":337,"name":"FORK_HEAD_3"},{"dbname":"PROSITE_PROFILES","description":"Forkhead-associated (FHA) domain profile.","id":"PS50006","interpro_description":"Forkhead-associated (FHA) domain","interpro_id":"IPR000253","interpro_name":"FHA_dom","locations":[{"end":123,"start":68}],"match_end":123,"match_start":68,"name":"FHA_DOMAIN"},{"dbname":"SMART","id":"SM00339","interpro_description":"Fork head domain","interpro_id":"IPR001766","interpro_name":"Fork_head_dom","locations":[{"end":425,"start":335}],"match_end":425,"match_start":335,"name":"forkneu4"},{"dbname":"SMART","id":"SM00240","interpro_description":"Forkhead-associated (FHA) domain","interpro_id":"IPR000253","interpro_name":"FHA_dom","locations":[{"end":123,"start":67}],"match_end":123,"match_start":67,"name":"FHA_2"},{"dbname":"PRINTS","description":"Fork head domain signature","id":"PR00053","interpro_description":"Fork head domain","interpro_id":"IPR001766","interpro_name":"Fork_head_dom","locations":[{"end":350,"start":337},{"end":375,"start":358},{"end":398,"start":381}],"match_end":398,"match_start":337,"name":"FORKHEAD"},{"dbname":"FUNFAM","description":"forkhead box protein G1","id":"G3DSA:1.10.10.10:FF:000135","locations":[{"end":432,"start":325}],"match_end":432,"match_start":325},{"dbname":"SUPERFAMILY","id":"SSF46785","interpro_description":"Winged helix DNA-binding domain superfamily","interpro_id":"IPR036390","interpro_name":"WH_DNA-bd_sf","locations":[{"end":429,"start":336}],"match_end":429,"match_start":336,"name":"\"Winged helix\" DNA-binding domain"},{"dbname":"SUPERFAMILY","id":"SSF49879","interpro_description":"SMAD/FHA domain superfamily","interpro_id":"IPR008984","interpro_name":"SMAD_FHA_dom_sf","locations":[{"end":152,"start":58}],"match_end":152,"match_start":58,"name":"SMAD/FHA domain"},{"dbname":"GENE3D","id":"G3DSA:2.60.200.20","locations":[{"end":153,"start":23}],"match_end":153,"match_start":23},{"dbname":"GENE3D","id":"G3DSA:1.10.10.10","interpro_description":"Winged helix-like DNA-binding domain superfamily","interpro_id":"IPR036388","interpro_name":"WH-like_DNA-bd_sf","locations":[{"end":432,"start":326}],"match_end":432,"match_start":326},{"dbname":"PANTHER","id":"PTHR45881","locations":[{"end":784,"start":20}],"match_end":784,"match_start":20,"name":"CHECKPOINT SUPPRESSOR 1-LIKE, ISOFORM A-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":183,"start":157},{"end":270,"start":245},{"end":492,"start":424},{"end":627,"start":593},{"end":706,"start":655},{"end":799,"start":745}],"match_end":799,"match_start":157,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":602,"start":593},{"end":627,"start":610},{"end":706,"start":693}],"match_end":706,"match_start":593,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":174,"start":162},{"end":692,"start":675},{"end":776,"start":745}],"match_end":776,"match_start":162,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1240086,"start_pos":1237687,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":271,"start":243}},{"range":{"end":503,"start":486}},{"range":{"end":598,"start":582}},{"range":{"end":617,"start":600}},{"range":{"end":629,"start":620}},{"range":{"end":662,"start":632}},{"range":{"end":706,"start":692}},{"range":{"end":724,"start":715}}],"name":"fhl1","ortholog_annotations":[{"gene_uniquename":"SJAG_01243","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC1142.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01243","ortholog_taxonid":4932,"ortholog_uniquename":"YPR104C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01243","ortholog_taxonid":4932,"ortholog_uniquename":"YPR104C","reference_uniquename":"PMID:26896847"}],"product":"DNA-binding forkhead transcription factor for ribosomal proteins Fhl1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000978"],"not-binding":["GO:0001228"]}},"subset_termids":["GO:0006355","GO:0005634","GO:0006351","GO:0003700"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000978":null,"GO:0001228":null,"GO:0005634":null,"GO:0060963":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01243.1"],"transcripts_by_uniquename":{"SJAG_01243.1":null},"uniprot_identifier":"B6K055","uniquename":"SJAG_01243"}


id: SJAG_01245
data:
  {"binding_sites":[{"assigned_by":"UniProtKB","ligand":"3',5'-cyclic AMP","range":{"end":234,"start":234}},{"assigned_by":"UniProtKB","ligand":"3',5'-cyclic AMP","range":{"end":243,"start":243}},{"assigned_by":"UniProtKB","ligand":"3',5'-cyclic AMP","range":{"end":354,"start":354}},{"assigned_by":"UniProtKB","ligand":"3',5'-cyclic AMP","range":{"end":363,"start":363}}],"cv_annotations":{"biological_process":[{"annotations":[100777],"is_not":false,"summary":null,"term":"GO:0042149"},{"annotations":[100778],"is_not":false,"summary":null,"term":"GO:0110034"},{"annotations":[100779],"is_not":false,"summary":null,"term":"GO:0046827"}],"cellular_component":[{"annotations":[71364],"is_not":false,"summary":null,"term":"GO:0005952"},{"annotations":[71361],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[71360],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[71362],"is_not":false,"summary":null,"term":"GO:0030552"},{"annotations":[71359],"is_not":false,"summary":null,"term":"GO:0004862"},{"annotations":[71358],"is_not":false,"summary":null,"term":"GO:0034236"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01245","EnsemblGenomes-Tr:EEB06206","InterPro:IPR012198","InterPro:IPR018490","InterPro:IPR018488","InterPro:IPR014710","InterPro:IPR000595","GOA:B6K056","InterPro:IPR003117","UniProtKB/TrEMBL:B6K056"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":416,"start":397}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rdl2","uniquename":"SJAG_01239"},{"name":"get3","uniquename":"SJAG_01240"},{"uniquename":"SJAG_01241"},{"name":"vps32","uniquename":"SJAG_01242"},{"name":"fhl1","uniquename":"SJAG_01243"},{"name":"cgs1","uniquename":"SJAG_01245"},{"uniquename":"SJAG_01246"},{"uniquename":"SJAG_01247"},{"name":"dtd1","uniquename":"SJAG_01248"},{"name":"ppr4","uniquename":"SJAG_01249"},{"name":"fyv7","uniquename":"SJAG_01250"}],"genes_by_uniquename":{"HGNC:9391":null,"HGNC:9392":null,"SJAG_01245":null,"SPAC8C9.03":null,"YIL033C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Regulatory subunit of type II PKA R-subunit","id":"PF02197","interpro_description":"cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain","interpro_id":"IPR003117","interpro_name":"cAMP_dep_PK_reg_su_I/II_a/b","locations":[{"end":37,"start":7}],"match_end":37,"match_start":7,"name":"RIIa"},{"dbname":"PFAM","description":"Cyclic nucleotide-binding domain","id":"PF00027","interpro_description":"Cyclic nucleotide-binding domain","interpro_id":"IPR000595","interpro_name":"cNMP-bd_dom","locations":[{"end":270,"start":176},{"end":387,"start":307}],"match_end":387,"match_start":176,"name":"cNMP_binding"},{"dbname":"CDD","description":"CAP_ED","id":"cd00038","interpro_description":"Cyclic nucleotide-binding domain","interpro_id":"IPR000595","interpro_name":"cNMP-bd_dom","locations":[{"end":279,"start":153},{"end":396,"start":288}],"match_end":396,"match_start":153,"name":"CAP_ED"},{"dbname":"PROSITE_PATTERNS","description":"Cyclic nucleotide-binding domain signature 1.","id":"PS00888","interpro_description":"Cyclic nucleotide-binding, conserved site","interpro_id":"IPR018488","interpro_name":"cNMP-bd_CS","locations":[{"end":331,"start":315}],"match_end":331,"match_start":315,"name":"CNMP_BINDING_1"},{"dbname":"PROSITE_PATTERNS","description":"Cyclic nucleotide-binding domain signature 2.","id":"PS00889","interpro_description":"Cyclic nucleotide-binding, conserved site","interpro_id":"IPR018488","interpro_name":"cNMP-bd_CS","locations":[{"end":249,"start":232}],"match_end":249,"match_start":232,"name":"CNMP_BINDING_2"},{"dbname":"PROSITE_PROFILES","description":"cAMP/cGMP binding motif profile.","id":"PS50042","interpro_description":"Cyclic nucleotide-binding domain","interpro_id":"IPR000595","interpro_name":"cNMP-bd_dom","locations":[{"end":285,"start":153},{"end":395,"start":288}],"match_end":395,"match_start":153,"name":"CNMP_BINDING_3"},{"dbname":"SMART","id":"SM00100","interpro_description":"Cyclic nucleotide-binding domain","interpro_id":"IPR000595","interpro_name":"cNMP-bd_dom","locations":[{"end":286,"start":153},{"end":405,"start":288}],"match_end":405,"match_start":153,"name":"cnmp_10"},{"dbname":"PRINTS","description":"cAMP-dependent protein kinase signature","id":"PR00103","locations":[{"end":204,"start":175},{"end":239,"start":230},{"end":253,"start":242},{"end":395,"start":383}],"match_end":395,"match_start":175,"name":"CAMPKINASE"},{"dbname":"FUNFAM","description":"cAMP-dependent protein kinase regulatory subunit","id":"G3DSA:2.60.120.10:FF:000039","locations":[{"end":267,"start":113}],"match_end":267,"match_start":113},{"dbname":"SUPERFAMILY","id":"SSF51206","interpro_description":"Cyclic nucleotide-binding domain superfamily","interpro_id":"IPR018490","interpro_name":"cNMP-bd_dom_sf","locations":[{"end":392,"start":98}],"match_end":392,"match_start":98,"name":"cAMP-binding domain-like"},{"dbname":"GENE3D","id":"G3DSA:2.60.120.10","interpro_description":"RmlC-like jelly roll fold","interpro_id":"IPR014710","interpro_name":"RmlC-like_jellyroll","locations":[{"end":409,"start":114}],"match_end":409,"match_start":114,"name":"Jelly Rolls"},{"dbname":"PANTHER","id":"PTHR11635","interpro_description":"cAMP-dependent protein kinase regulatory subunit-like","interpro_id":"IPR050503","interpro_name":"cAMP-dep_PK_reg_su-like","locations":[{"end":396,"start":15}],"match_end":396,"match_start":15,"name":"CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN"},{"dbname":"PIRSF","id":"PIRSF000548","interpro_description":"cAMP-dependent protein kinase regulatory subunit","interpro_id":"IPR012198","interpro_name":"cAMP_dep_PK_reg_su","locations":[{"end":413,"start":2}],"match_end":413,"match_start":2,"name":"PK_regulatory"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":416,"start":397}],"match_end":416,"match_start":397,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":416,"start":406}],"match_end":416,"match_start":406,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1243334,"start_pos":1241893,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":371,"start":360}},{"range":{"end":410,"start":398}}],"name":"cgs1","ortholog_annotations":[{"gene_uniquename":"SJAG_01245","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9391","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01245","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9392","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01245","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC8C9.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01245","ortholog_taxonid":4932,"ortholog_uniquename":"YIL033C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01245","ortholog_taxonid":4932,"ortholog_uniquename":"YIL033C","reference_uniquename":"PMID:26896847"}],"product":"cAMP-dependent protein kinase regulatory subunit Cgs1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0030552","GO:0034236"],"not-binding":["GO:0004862"]}},"subset_termids":["GO:0030234","GO:0006913","GO:0005829","GO:0023052","GO:0098772","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004862":null,"GO:0005634":null,"GO:0005829":null,"GO:0005952":null,"GO:0030552":null,"GO:0034236":null,"GO:0042149":null,"GO:0046827":null,"GO:0110034":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01245.1"],"transcripts_by_uniquename":{"SJAG_01245.1":null},"uniprot_identifier":"B6K056","uniquename":"SJAG_01245"}


id: SJAG_01246
data:
  {"cv_annotations":{"biological_process":[{"annotations":[78255],"is_not":false,"summary":null,"term":"GO:0006457"}],"cellular_component":[{"annotations":[78253],"is_not":false,"summary":null,"term":"GO:0005737"}],"molecular_function":[{"annotations":[78254],"is_not":false,"summary":null,"term":"GO:0003755"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K057","InterPro:IPR024936","GOA:B6K057","EnsemblGenomes-Tr:EEB06207","InterPro:IPR020892","EnsemblGenomes-Gn:SJAG_01246","InterPro:IPR029000","InterPro:IPR002130"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"get3","uniquename":"SJAG_01240"},{"uniquename":"SJAG_01241"},{"name":"vps32","uniquename":"SJAG_01242"},{"name":"fhl1","uniquename":"SJAG_01243"},{"name":"cgs1","uniquename":"SJAG_01245"},{"uniquename":"SJAG_01246"},{"uniquename":"SJAG_01247"},{"name":"dtd1","uniquename":"SJAG_01248"},{"name":"ppr4","uniquename":"SJAG_01249"},{"name":"fyv7","uniquename":"SJAG_01250"},{"name":"atg10","uniquename":"SJAG_01251"}],"genes_by_uniquename":{"SJAG_01246":null,"YDR155C":null,"YML078W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD","id":"PF00160","interpro_description":"Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain","interpro_id":"IPR002130","interpro_name":"Cyclophilin-type_PPIase_dom","locations":[{"end":160,"start":12}],"match_end":160,"match_start":12,"name":"Pro_isomerase"},{"dbname":"CDD","description":"cyclophilin_ABH_like","id":"cd01926","locations":[{"end":160,"start":2}],"match_end":160,"match_start":2,"name":"cyclophilin_ABH_like"},{"dbname":"PROSITE_PATTERNS","description":"Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature.","id":"PS00170","interpro_description":"Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site","interpro_id":"IPR020892","interpro_name":"Cyclophilin-type_PPIase_CS","locations":[{"end":63,"start":46}],"match_end":63,"match_start":46,"name":"CSA_PPIASE_1"},{"dbname":"PROSITE_PROFILES","description":"Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile.","id":"PS50072","interpro_description":"Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain","interpro_id":"IPR002130","interpro_name":"Cyclophilin-type_PPIase_dom","locations":[{"end":161,"start":5}],"match_end":161,"match_start":5,"name":"CSA_PPIASE_2"},{"dbname":"PRINTS","description":"Cyclophilin peptidyl-prolyl cis-trans isomerase signature","id":"PR00153","interpro_description":"Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain","interpro_id":"IPR002130","interpro_name":"Cyclophilin-type_PPIase_dom","locations":[{"end":37,"start":22},{"end":63,"start":51},{"end":137,"start":94}],"match_end":137,"match_start":22,"name":"CSAPPISMRASE"},{"dbname":"FUNFAM","description":"Peptidyl-prolyl cis-trans isomerase","id":"G3DSA:2.40.100.10:FF:000013","locations":[{"end":162,"start":1}],"match_end":162,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF50891","interpro_description":"Cyclophilin-like domain superfamily","interpro_id":"IPR029000","interpro_name":"Cyclophilin-like_dom_sf","locations":[{"end":162,"start":2}],"match_end":162,"match_start":2,"name":"Cyclophilin-like"},{"dbname":"GENE3D","id":"G3DSA:2.40.100.10","interpro_description":"Cyclophilin-like domain superfamily","interpro_id":"IPR029000","interpro_name":"Cyclophilin-like_dom_sf","locations":[{"end":164,"start":1}],"match_end":164,"match_start":1},{"dbname":"PANTHER","id":"PTHR11071","locations":[{"end":161,"start":3}],"match_end":161,"match_start":3,"name":"PEPTIDYL-PROLYL CIS-TRANS ISOMERASE"},{"dbname":"PIRSF","id":"PIRSF001467","interpro_description":"Cyclophilin-type peptidyl-prolyl cis-trans isomerase","interpro_id":"IPR024936","interpro_name":"Cyclophilin-type_PPIase","locations":[{"end":164,"start":1}],"match_end":164,"match_start":1,"name":"Peptidylpro_ismrse"}],"location":{"chromosome_name":"supercont5.3","end_pos":1244234,"start_pos":1243652,"strand":"reverse"},"ortholog_annotations":[{"gene_uniquename":"SJAG_01246","ortholog_taxonid":4932,"ortholog_uniquename":"YDR155C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01246","ortholog_taxonid":4932,"ortholog_uniquename":"YML078W","reference_uniquename":"PMID:26896847"}],"product":"cyclophilin-type peptidyl-prolyl cis-trans isomerase","references_by_uniquename":{"GO_REF:0000033":null,"PMID:26896847":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003755"]}},"subset_termids":["GO:0006457","GO:0016853","GO:0140096","GO:0051604"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0003755":null,"GO:0005737":null,"GO:0006457":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01246.1"],"transcripts_by_uniquename":{"SJAG_01246.1":null},"uniprot_identifier":"B6K057","uniquename":"SJAG_01246"}


id: SJAG_01247
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[100782],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[100784],"is_not":false,"summary":null,"term":"GO:0005886"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01247","EnsemblGenomes-Tr:EEB06208","UniProtKB/TrEMBL:B6K058"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":39,"start":1}},{"range":{"end":244,"start":141}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01241"},{"name":"vps32","uniquename":"SJAG_01242"},{"name":"fhl1","uniquename":"SJAG_01243"},{"name":"cgs1","uniquename":"SJAG_01245"},{"uniquename":"SJAG_01246"},{"uniquename":"SJAG_01247"},{"name":"dtd1","uniquename":"SJAG_01248"},{"name":"ppr4","uniquename":"SJAG_01249"},{"name":"fyv7","uniquename":"SJAG_01250"},{"name":"atg10","uniquename":"SJAG_01251"},{"name":"mni1","uniquename":"SJAG_01252"}],"genes_by_uniquename":{"SJAG_01247":null,"SPAC8C9.04":null},"has_protein_features":true,"interpro_matches":[{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":39,"start":1},{"end":244,"start":141}],"match_end":244,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":39,"start":11},{"end":238,"start":141}],"match_end":238,"match_start":11,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1246115,"start_pos":1245255,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":62,"start":10}},{"range":{"end":79,"start":67}},{"range":{"end":240,"start":95}},{"range":{"end":259,"start":244}}],"ortholog_annotations":[{"gene_uniquename":"SJAG_01247","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC8C9.04"}],"product":"Schizosaccharomyces specific disordered protein","references_by_uniquename":{"GO_REF:0000107":null},"split_by_parent_groups":{},"subset_termids":["GO:0005886"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005886":null,"GO:0032153":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01247.1"],"transcripts_by_uniquename":{"SJAG_01247.1":null},"uniprot_identifier":"B6K058","uniquename":"SJAG_01247"}


id: SJAG_01248
data:
  {"cv_annotations":{"biological_process":[{"annotations":[61510],"is_not":false,"summary":null,"term":"GO:0106074"},{"annotations":[100788],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[100785],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[100786],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[73921],"is_not":false,"summary":null,"term":"GO:0051500"},{"annotations":[61504],"is_not":false,"summary":null,"term":"GO:0000049"}]},"dbxrefs":["GOA:B6K059","EnsemblGenomes-Gn:SJAG_01248","EnsemblGenomes-Tr:EEB06209","InterPro:IPR003732","InterPro:IPR023509","UniProtKB/TrEMBL:B6K059"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"vps32","uniquename":"SJAG_01242"},{"name":"fhl1","uniquename":"SJAG_01243"},{"name":"cgs1","uniquename":"SJAG_01245"},{"uniquename":"SJAG_01246"},{"uniquename":"SJAG_01247"},{"name":"dtd1","uniquename":"SJAG_01248"},{"name":"ppr4","uniquename":"SJAG_01249"},{"name":"fyv7","uniquename":"SJAG_01250"},{"name":"atg10","uniquename":"SJAG_01251"},{"name":"mni1","uniquename":"SJAG_01252"},{"name":"ubr1","uniquename":"SJAG_01253"}],"genes_by_uniquename":{"HGNC:16219":null,"SJAG_01248":null,"SPAC8C9.05":null,"YDL219W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"D-Tyr-tRNA(Tyr) deacylase","id":"PF02580","interpro_description":"D-aminoacyl-tRNA deacylase DTD","interpro_id":"IPR003732","interpro_name":"Daa-tRNA_deacyls_DTD","locations":[{"end":147,"start":2}],"match_end":147,"match_start":2,"name":"Tyr_Deacylase"},{"dbname":"CDD","description":"Dtyr_deacylase","id":"cd00563","interpro_description":"D-aminoacyl-tRNA deacylase DTD","interpro_id":"IPR003732","interpro_name":"Daa-tRNA_deacyls_DTD","locations":[{"end":148,"start":1}],"match_end":148,"match_start":1,"name":"Dtyr_deacylase"},{"dbname":"FUNFAM","description":"D-aminoacyl-tRNA deacylase","id":"G3DSA:3.50.80.10:FF:000001","locations":[{"end":150,"start":1}],"match_end":150,"match_start":1},{"dbname":"SUPERFAMILY","id":"SSF69500","interpro_description":"D-aminoacyl-tRNA deacylase-like superfamily","interpro_id":"IPR023509","interpro_name":"DTD-like_sf","locations":[{"end":148,"start":1}],"match_end":148,"match_start":1,"name":"DTD-like"},{"dbname":"GENE3D","id":"G3DSA:3.50.80.10","interpro_description":"D-aminoacyl-tRNA deacylase-like superfamily","interpro_id":"IPR023509","interpro_name":"DTD-like_sf","locations":[{"end":150,"start":1}],"match_end":150,"match_start":1},{"dbname":"PANTHER","id":"PTHR10472","interpro_description":"D-aminoacyl-tRNA deacylase DTD","interpro_id":"IPR003732","interpro_name":"Daa-tRNA_deacyls_DTD","locations":[{"end":149,"start":1}],"match_end":149,"match_start":1,"name":"D-TYROSYL-TRNA TYR  DEACYLASE"},{"dbname":"HAMAP","description":"D-aminoacyl-tRNA deacylase [dtd].","id":"MF_00518","interpro_description":"D-aminoacyl-tRNA deacylase DTD","interpro_id":"IPR003732","interpro_name":"Daa-tRNA_deacyls_DTD","locations":[{"end":148,"start":1}],"match_end":148,"match_start":1,"name":"Deacylase_Dtd"},{"dbname":"NCBIFAM","description":"D-aminoacyl-tRNA deacylase","id":"TIGR00256","interpro_description":"D-aminoacyl-tRNA deacylase DTD","interpro_id":"IPR003732","interpro_name":"Daa-tRNA_deacyls_DTD","locations":[{"end":148,"start":1}],"match_end":148,"match_start":1,"name":"TIGR00256"}],"location":{"chromosome_name":"supercont5.3","end_pos":1247519,"start_pos":1246747,"strand":"forward"},"name":"dtd1","ortholog_annotations":[{"gene_uniquename":"SJAG_01248","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16219","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01248","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC8C9.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01248","ortholog_taxonid":4932,"ortholog_uniquename":"YDL219W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01248","ortholog_taxonid":4932,"ortholog_uniquename":"YDL219W","reference_uniquename":"PMID:26896847"}],"product":"D-Tyr-tRNA deacylase Dtd1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000049"],"not-binding":["GO:0051500"]}},"subset_termids":["GO:0005829","GO:0002181","GO:0006399","GO:0016788","GO:0140098","GO:0005634","GO:0140101"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000049":null,"GO:0002181":null,"GO:0005634":null,"GO:0005829":null,"GO:0051500":null,"GO:0106074":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01248.1"],"transcripts_by_uniquename":{"SJAG_01248.1":null},"uniprot_identifier":"B6K059","uniquename":"SJAG_01248"}


id: SJAG_01249
data:
  {"cv_annotations":{"biological_process":[{"annotations":[100799],"is_not":false,"summary":null,"term":"GO:0070134"}],"cellular_component":[{"annotations":[100792],"is_not":false,"summary":null,"term":"GO:0099616"},{"annotations":[100794],"is_not":false,"summary":null,"term":"GO:0180049"}],"molecular_function":[{"annotations":[100800],"is_not":false,"summary":null,"term":"GO:0048027"},{"annotations":[100801],"is_not":false,"summary":null,"term":"GO:0160134"},{"annotations":[100803],"is_not":false,"summary":null,"term":"GO:0008494"}]},"dbxrefs":["InterPro:IPR002885","InterPro:IPR011990","EnsemblGenomes-Gn:SJAG_01249","EnsemblGenomes-Tr:EEB06210","UniProtKB/TrEMBL:B6K060"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"fhl1","uniquename":"SJAG_01243"},{"name":"cgs1","uniquename":"SJAG_01245"},{"uniquename":"SJAG_01246"},{"uniquename":"SJAG_01247"},{"name":"dtd1","uniquename":"SJAG_01248"},{"name":"ppr4","uniquename":"SJAG_01249"},{"name":"fyv7","uniquename":"SJAG_01250"},{"name":"atg10","uniquename":"SJAG_01251"},{"name":"mni1","uniquename":"SJAG_01252"},{"name":"ubr1","uniquename":"SJAG_01253"},{"name":"cyr1","uniquename":"SJAG_01254"}],"genes_by_uniquename":{"SJAG_01249":null,"SPAC8C9.06c":null,"YLR067C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PROSITE_PROFILES","description":"Pentatricopeptide (PPR) repeat profile.","id":"PS51375","interpro_description":"Pentatricopeptide repeat","interpro_id":"IPR002885","interpro_name":"Pentatricopeptide_rpt","locations":[{"end":473,"start":439}],"match_end":473,"match_start":439,"name":"PPR"},{"dbname":"GENE3D","id":"G3DSA:1.25.40.10","interpro_description":"Tetratricopeptide-like helical domain superfamily","interpro_id":"IPR011990","interpro_name":"TPR-like_helical_dom_sf","locations":[{"end":650,"start":421}],"match_end":650,"match_start":421,"name":"Tetratricopeptide repeat domain"},{"dbname":"PANTHER","id":"PTHR47942","interpro_description":"Pentatricopeptide/CCM1 RNA-binding","interpro_id":"IPR051222","interpro_name":"PPR/CCM1_RNA-binding","locations":[{"end":803,"start":62}],"match_end":803,"match_start":62,"name":"TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED"}],"location":{"chromosome_name":"supercont5.3","end_pos":1250297,"start_pos":1247529,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":159,"start":148}},{"range":{"end":898,"start":887}}],"name":"ppr4","ortholog_annotations":[{"gene_uniquename":"SJAG_01249","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC8C9.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01249","ortholog_taxonid":4932,"ortholog_uniquename":"YLR067C","reference_uniquename":"PMID:29761456"}],"product":"mitochondrial PPR repeat protein, translation activator for Cox1 Ppr4","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0048027"],"not-binding":["GO:0008494","GO:0160134"]}},"subset_termids":["GO:0060090","GO:0005739","GO:0140053","GO:0045182"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0008494":null,"GO:0048027":null,"GO:0070134":null,"GO:0099616":null,"GO:0160134":null,"GO:0180049":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01249.1"],"transcripts_by_uniquename":{"SJAG_01249.1":null},"uniprot_identifier":"B6K060","uniquename":"SJAG_01249"}


id: SJAG_01250
data:
  {"coiled_coil_coords":[{"range":{"end":118,"start":78}}],"cv_annotations":{"biological_process":[{"annotations":[100806],"is_not":false,"summary":null,"term":"GO:0030490"}],"cellular_component":[{"annotations":[100805],"is_not":false,"summary":null,"term":"GO:0005730"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K061","InterPro:IPR013730","EnsemblGenomes-Gn:SJAG_01250","EnsemblGenomes-Tr:EEB06211"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":143,"start":60}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cgs1","uniquename":"SJAG_01245"},{"uniquename":"SJAG_01246"},{"uniquename":"SJAG_01247"},{"name":"dtd1","uniquename":"SJAG_01248"},{"name":"ppr4","uniquename":"SJAG_01249"},{"name":"fyv7","uniquename":"SJAG_01250"},{"name":"atg10","uniquename":"SJAG_01251"},{"name":"mni1","uniquename":"SJAG_01252"},{"name":"ubr1","uniquename":"SJAG_01253"},{"name":"cyr1","uniquename":"SJAG_01254"},{"name":"gsr1","uniquename":"SJAG_01255"}],"genes_by_uniquename":{"HGNC:25005":null,"SJAG_01250":null,"SPAC8C9.07":null,"YLR068W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"rRNA processing","id":"PF08524","interpro_description":"Fyv7/TAP26","interpro_id":"IPR013730","interpro_name":"Fyv7/TAP26","locations":[{"end":139,"start":14}],"match_end":139,"match_start":14,"name":"rRNA_processing"},{"dbname":"COILS","id":"Coil","locations":[{"end":118,"start":78}],"match_end":118,"match_start":78,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":143,"start":60}],"match_end":143,"match_start":60,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":110,"start":78}],"match_end":110,"match_start":78,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1251077,"start_pos":1250646,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":18,"start":4}},{"range":{"end":119,"start":78}}],"name":"fyv7","ortholog_annotations":[{"gene_uniquename":"SJAG_01250","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:25005","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01250","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC8C9.07","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01250","ortholog_taxonid":4932,"ortholog_uniquename":"YLR068W","reference_uniquename":"PMID:29761456"}],"product":"rRNA processing protein Fyv7","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0042254","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005730":null,"GO:0030490":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01250.1"],"transcripts_by_uniquename":{"SJAG_01250.1":null},"uniprot_identifier":"B6K061","uniquename":"SJAG_01250"}


id: SJAG_01251
data:
  {"coiled_coil_coords":[{"range":{"end":22,"start":2}}],"cv_annotations":{"biological_process":[{"annotations":[93240],"is_not":false,"summary":null,"term":"GO:0000045"},{"annotations":[93242],"is_not":false,"summary":null,"term":"GO:0000423"}],"cellular_component":[{"annotations":[93237],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[93238],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[93239],"is_not":false,"summary":null,"term":"GO:0034045"}],"molecular_function":[{"annotations":[93243],"is_not":false,"summary":null,"term":"GO:0061651"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06212","UniProtKB/TrEMBL:B6K062","InterPro:IPR007135","GOA:B6K062","EnsemblGenomes-Gn:SJAG_01251"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01246"},{"uniquename":"SJAG_01247"},{"name":"dtd1","uniquename":"SJAG_01248"},{"name":"ppr4","uniquename":"SJAG_01249"},{"name":"fyv7","uniquename":"SJAG_01250"},{"name":"atg10","uniquename":"SJAG_01251"},{"name":"mni1","uniquename":"SJAG_01252"},{"name":"ubr1","uniquename":"SJAG_01253"},{"name":"cyr1","uniquename":"SJAG_01254"},{"name":"gsr1","uniquename":"SJAG_01255"},{"uniquename":"SJAG_05617"}],"genes_by_uniquename":{"HGNC:20315":null,"SJAG_01251":null,"SPAC227.04":null,"YLL042C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Autophagocytosis associated protein, active-site domain","id":"PF03987","interpro_description":"Ubiquitin-like-conjugating enzyme Atg3/Atg10","interpro_id":"IPR007135","interpro_name":"Atg3/Atg10","locations":[{"end":159,"start":5}],"match_end":159,"match_start":5,"name":"Autophagy_act_C"},{"dbname":"GENE3D","id":"G3DSA:3.30.1460.50","locations":[{"end":162,"start":1}],"match_end":162,"match_start":1},{"dbname":"PANTHER","id":"PTHR14957","locations":[{"end":157,"start":44}],"match_end":157,"match_start":44,"name":"UBIQUITIN-LIKE-CONJUGATING ENZYME ATG10"},{"dbname":"COILS","id":"Coil","locations":[{"end":22,"start":2}],"match_end":22,"match_start":2,"name":"Coil"}],"location":{"chromosome_name":"supercont5.3","end_pos":1251818,"start_pos":1251264,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":17,"start":6}}],"name":"atg10","ortholog_annotations":[{"gene_uniquename":"SJAG_01251","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20315","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01251","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC227.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01251","ortholog_taxonid":4932,"ortholog_uniquename":"YLL042C","reference_uniquename":"PMID:29761456"}],"product":"Atg12 conjugating enzyme Atg10","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0061651"]}},"subset_termids":["GO:0006914","GO:0019787","GO:0016746","GO:0000407","GO:0140096","GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000045":null,"GO:0000423":null,"GO:0005634":null,"GO:0005829":null,"GO:0034045":null,"GO:0061651":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01251.1"],"transcripts_by_uniquename":{"SJAG_01251.1":null},"uniprot_identifier":"B6K062","uniquename":"SJAG_01251"}


id: SJAG_01252
data:
  {"cv_annotations":{"biological_process":[{"annotations":[62115],"is_not":false,"summary":null,"term":"GO:1903259"},{"annotations":[106250],"is_not":false,"summary":null,"term":"GO:0000184"}],"cellular_component":[{"annotations":[106247],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[106248],"is_not":false,"summary":null,"term":"GO:0035145"}],"molecular_function":[{"annotations":[106251],"is_not":false,"summary":null,"term":"GO:0003723"}]},"dbxrefs":["InterPro:IPR015362","InterPro:IPR036348","UniProtKB/TrEMBL:B6K063","InterPro:IPR039333","EnsemblGenomes-Tr:EEB06213","EnsemblGenomes-Gn:SJAG_01252","GOA:B6K063"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":70,"start":1}},{"range":{"end":176,"start":82}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01247"},{"name":"dtd1","uniquename":"SJAG_01248"},{"name":"ppr4","uniquename":"SJAG_01249"},{"name":"fyv7","uniquename":"SJAG_01250"},{"name":"atg10","uniquename":"SJAG_01251"},{"name":"mni1","uniquename":"SJAG_01252"},{"name":"ubr1","uniquename":"SJAG_01253"},{"name":"cyr1","uniquename":"SJAG_01254"},{"name":"gsr1","uniquename":"SJAG_01255"},{"uniquename":"SJAG_05617"},{"name":"rcr1","uniquename":"SJAG_01258"}],"genes_by_uniquename":{"HGNC:30258":null,"SJAG_01252":null,"SPBC19C7.01":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Mago binding","id":"PF09282","interpro_description":"WIBG, Mago-binding","interpro_id":"IPR015362","interpro_name":"WIBG_mago-bd","locations":[{"end":52,"start":26}],"match_end":52,"match_start":26,"name":"Mago-bind"},{"dbname":"SMART","id":"SM01273","interpro_description":"WIBG, Mago-binding","interpro_id":"IPR015362","interpro_name":"WIBG_mago-bd","locations":[{"end":52,"start":26}],"match_end":52,"match_start":26,"name":"Mago_bind_2"},{"dbname":"SUPERFAMILY","id":"SSF101931","interpro_description":"WIBG, N-terminal domain superfamily","interpro_id":"IPR036348","interpro_name":"WIBG_N_sf","locations":[{"end":51,"start":25}],"match_end":51,"match_start":25,"name":"Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain"},{"dbname":"PANTHER","id":"PTHR22959","interpro_description":"Partner of Y14 and mago","interpro_id":"IPR039333","interpro_name":"PYM1","locations":[{"end":147,"start":24}],"match_end":147,"match_start":24,"name":"PYM PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":70,"start":1},{"end":176,"start":82}],"match_end":176,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":66,"start":55},{"end":122,"start":90}],"match_end":122,"match_start":55,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1254916,"start_pos":1254218,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":107,"start":96}}],"name":"mni1","ortholog_annotations":[{"gene_uniquename":"SJAG_01252","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30258","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01252","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19C7.01","reference_uniquename":"PMID:21511999"}],"product":"exon-exon junction complex disassembly factor, human partner of Y14 and mago ortholog","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003723"]}},"subset_termids":["GO:0005634","GO:0005829","GO:0016071"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000184":null,"GO:0003723":null,"GO:0005829":null,"GO:0035145":null,"GO:1903259":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01252.1"],"transcripts_by_uniquename":{"SJAG_01252.1":null},"uniprot_identifier":"B6K063","uniquename":"SJAG_01252"}


id: SJAG_01253
data:
  {"coiled_coil_coords":[{"range":{"end":1130,"start":1096}}],"cv_annotations":{"biological_process":[{"annotations":[106255],"is_not":false,"summary":null,"term":"GO:2000639"},{"annotations":[106256],"is_not":false,"summary":null,"term":"GO:1900735"},{"annotations":[74733],"is_not":false,"summary":null,"term":"GO:0071596"}],"cellular_component":[{"annotations":[74731],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[106253],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[74732],"is_not":false,"summary":null,"term":"GO:0000151"}],"molecular_function":[{"annotations":[74734],"is_not":false,"summary":null,"term":"GO:0061630"},{"annotations":[62507],"is_not":false,"summary":null,"term":"GO:0008270"}],"mondo":[{"annotations":[86170],"is_not":false,"summary":null,"term":"MONDO:0009479"}]},"dbxrefs":["UniProtKB/TrEMBL:B6K064","InterPro:IPR039164","InterPro:IPR003126","EnsemblGenomes-Gn:SJAG_01253","EnsemblGenomes-Tr:EEB06214","GOA:B6K064","InterPro:IPR036390"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"dtd1","uniquename":"SJAG_01248"},{"name":"ppr4","uniquename":"SJAG_01249"},{"name":"fyv7","uniquename":"SJAG_01250"},{"name":"atg10","uniquename":"SJAG_01251"},{"name":"mni1","uniquename":"SJAG_01252"},{"name":"ubr1","uniquename":"SJAG_01253"},{"name":"cyr1","uniquename":"SJAG_01254"},{"name":"gsr1","uniquename":"SJAG_01255"},{"uniquename":"SJAG_05617"},{"name":"rcr1","uniquename":"SJAG_01258"},{"name":"prs1","uniquename":"SJAG_01259"}],"genes_by_uniquename":{"HGNC:16808":null,"HGNC:21289":null,"SJAG_01253":null,"SPBC19C7.02":null,"YGR184C":null,"YLR024C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Putative zinc finger in N-recognin (UBR box)","id":"PF02207","interpro_description":"Zinc finger, UBR-type","interpro_id":"IPR003126","interpro_name":"Znf_UBR","locations":[{"end":166,"start":97}],"match_end":166,"match_start":97,"name":"zf-UBR"},{"dbname":"PFAM","description":"Proteolysis_6 C-terminal","id":"PF18995","interpro_description":"E3 ubiquitin-protein ligase UBR-like, C-terminal","interpro_id":"IPR044046","interpro_name":"E3_ligase_UBR-like_C","locations":[{"end":1900,"start":1466}],"match_end":1900,"match_start":1466,"name":"PRT6_C"},{"dbname":"PFAM","description":"E3 ubiquitin-protein ligase UBR1-like, winged-helix domain","id":"PF22960","interpro_description":"E3 ubiquitin-protein ligase UBR1-like, winged-helix domain","interpro_id":"IPR055194","interpro_name":"UBR1-like_winged-helix","locations":[{"end":942,"start":851}],"match_end":942,"match_start":851,"name":"UBR1-like_wing"},{"dbname":"CDD","description":"RING-H2_UBR1-like","id":"cd16482","locations":[{"end":1316,"start":1260}],"match_end":1316,"match_start":1260,"name":"RING-H2_UBR1-like"},{"dbname":"CDD","description":"UBR-box_UBR3","id":"cd19673","locations":[{"end":166,"start":95}],"match_end":166,"match_start":95,"name":"UBR-box_UBR3"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger UBR-type profile.","id":"PS51157","interpro_description":"Zinc finger, UBR-type","interpro_id":"IPR003126","interpro_name":"Znf_UBR","locations":[{"end":168,"start":96}],"match_end":168,"match_start":96,"name":"ZF_UBR"},{"dbname":"SMART","id":"SM00396","interpro_description":"Zinc finger, UBR-type","interpro_id":"IPR003126","interpro_name":"Znf_UBR","locations":[{"end":167,"start":96}],"match_end":167,"match_start":96,"name":"push_1"},{"dbname":"FUNFAM","description":"Putative e3 ubiquitin-protein ligase ubr3","id":"G3DSA:2.10.110.30:FF:000002","locations":[{"end":168,"start":98}],"match_end":168,"match_start":98},{"dbname":"SUPERFAMILY","id":"SSF46785","interpro_description":"Winged helix DNA-binding domain superfamily","interpro_id":"IPR036390","interpro_name":"WH_DNA-bd_sf","locations":[{"end":936,"start":852}],"match_end":936,"match_start":852,"name":"\"Winged helix\" DNA-binding domain"},{"dbname":"GENE3D","id":"G3DSA:2.10.110.30","locations":[{"end":168,"start":98}],"match_end":168,"match_start":98},{"dbname":"GENE3D","id":"G3DSA:1.10.10.2670","interpro_description":"E3 ubiquitin-protein ligase ELL-like","interpro_id":"IPR042065","interpro_name":"E3_ELL-like","locations":[{"end":942,"start":846}],"match_end":942,"match_start":846},{"dbname":"PANTHER","id":"PTHR21497","interpro_description":"E3 ubiquitin-protein ligase UBR1-like","interpro_id":"IPR039164","interpro_name":"UBR1-like","locations":[{"end":1912,"start":89}],"match_end":1912,"match_start":89,"name":"UBIQUITIN LIGASE E3 ALPHA-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":1130,"start":1096}],"match_end":1130,"match_start":1096,"name":"Coil"}],"location":{"chromosome_name":"supercont5.3","end_pos":1260946,"start_pos":1255117,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":392,"start":385}},{"range":{"end":410,"start":394}},{"range":{"end":841,"start":828}},{"range":{"end":1118,"start":1104}},{"range":{"end":1160,"start":1145}},{"range":{"end":1216,"start":1204}},{"range":{"end":1367,"start":1354}},{"range":{"end":1417,"start":1407}},{"range":{"end":1438,"start":1425}}],"name":"ubr1","ortholog_annotations":[{"gene_uniquename":"SJAG_01253","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16808","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01253","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:21289","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01253","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19C7.02","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01253","ortholog_taxonid":4932,"ortholog_uniquename":"YGR184C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01253","ortholog_taxonid":4932,"ortholog_uniquename":"YGR184C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01253","ortholog_taxonid":4932,"ortholog_uniquename":"YLR024C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01253","ortholog_taxonid":4932,"ortholog_uniquename":"YLR024C","reference_uniquename":"PMID:26896847"}],"product":"N-end-recognizing protein, UBR ubiquitin-protein ligase E3 Ubr1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"],"not-binding":["GO:0061630"]}},"subset_termids":["GO:0005634","MONDO:0002320","GO:0140096","MONDO:0006025","GO:0019787","GO:0030163","GO:0007155","GO:0016746","GO:0023052"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000151":null,"GO:0005634":null,"GO:0005737":null,"GO:0008270":null,"GO:0061630":null,"GO:0071596":null,"GO:1900735":null,"GO:2000639":null,"MONDO:0009479":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01253.1"],"transcripts_by_uniquename":{"SJAG_01253.1":null},"uniprot_identifier":"B6K064","uniquename":"SJAG_01253"}


id: SJAG_01254
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106263],"is_not":false,"summary":null,"term":"GO:0010619"},{"annotations":[65408],"is_not":false,"summary":null,"term":"GO:0009190"},{"annotations":[65406],"is_not":false,"summary":null,"term":"GO:0035556"},{"annotations":[106266],"is_not":false,"summary":null,"term":"GO:0010515"},{"annotations":[106267],"is_not":false,"summary":null,"term":"GO:0000122"}],"cellular_component":[{"annotations":[76992],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[106262],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[65410],"is_not":false,"summary":null,"term":"GO:0004016"},{"annotations":[65409],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[106270],"is_not":false,"summary":null,"term":"GO:0000287"},{"annotations":[106271],"is_not":false,"summary":null,"term":"GO:0030145"}]},"dbxrefs":["InterPro:IPR001932","EnsemblGenomes-Tr:EEB06215","InterPro:IPR001611","EnsemblGenomes-Gn:SJAG_01254","InterPro:IPR000159","InterPro:IPR003591","InterPro:IPR029787","InterPro:IPR032675","UniProtKB/TrEMBL:B6K065","GOA:B6K065","InterPro:IPR001054","InterPro:IPR036457"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":37,"start":1}},{"range":{"end":188,"start":51}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ppr4","uniquename":"SJAG_01249"},{"name":"fyv7","uniquename":"SJAG_01250"},{"name":"atg10","uniquename":"SJAG_01251"},{"name":"mni1","uniquename":"SJAG_01252"},{"name":"ubr1","uniquename":"SJAG_01253"},{"name":"cyr1","uniquename":"SJAG_01254"},{"name":"gsr1","uniquename":"SJAG_01255"},{"uniquename":"SJAG_05617"},{"name":"rcr1","uniquename":"SJAG_01258"},{"name":"prs1","uniquename":"SJAG_01259"},{"name":"sen34","uniquename":"SJAG_01260"}],"genes_by_uniquename":{"SJAG_01254":null,"SPBC19C7.03":null,"YJL005W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"PHLPP protein RA domain","id":"PF23010","interpro_description":"PHLPP-like, RA domain","interpro_id":"IPR055071","interpro_name":"RA_PHLPP-like","locations":[{"end":364,"start":280}],"match_end":364,"match_start":280,"name":"RA_3"},{"dbname":"PFAM","description":"Adenylate and Guanylate cyclase catalytic domain","id":"PF00211","interpro_description":"Adenylyl cyclase class-3/4/guanylyl cyclase","interpro_id":"IPR001054","interpro_name":"A/G_cyclase","locations":[{"end":1504,"start":1313}],"match_end":1504,"match_start":1313,"name":"Guanylate_cyc"},{"dbname":"PFAM","description":"Protein phosphatase 2C","id":"PF00481","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":1252,"start":1100}],"match_end":1252,"match_start":1100,"name":"PP2C"},{"dbname":"PFAM","description":"Leucine rich repeat","id":"PF13855","interpro_description":"Leucine-rich repeat","interpro_id":"IPR001611","interpro_name":"Leu-rich_rpt","locations":[{"end":544,"start":486},{"end":613,"start":556},{"end":747,"start":692},{"end":849,"start":790}],"match_end":849,"match_start":486,"name":"LRR_8"},{"dbname":"CDD","description":"PP2Cc","id":"cd00143","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":1262,"start":1001}],"match_end":1262,"match_start":1001,"name":"PP2Cc"},{"dbname":"CDD","description":"CHD","id":"cd07302","interpro_description":"Adenylyl cyclase class-3/4/guanylyl cyclase","interpro_id":"IPR001054","interpro_name":"A/G_cyclase","locations":[{"end":1521,"start":1318}],"match_end":1521,"match_start":1318,"name":"CHD"},{"dbname":"PROSITE_PROFILES","description":"Leucine-rich repeat profile.","id":"PS51450","interpro_description":"Leucine-rich repeat","interpro_id":"IPR001611","interpro_name":"Leu-rich_rpt","locations":[{"end":601,"start":580},{"end":736,"start":715},{"end":835,"start":814}],"match_end":835,"match_start":580,"name":"LRR"},{"dbname":"PROSITE_PROFILES","description":"Guanylate cyclase domain profile.","id":"PS50125","interpro_description":"Adenylyl cyclase class-3/4/guanylyl cyclase","interpro_id":"IPR001054","interpro_name":"A/G_cyclase","locations":[{"end":1456,"start":1319}],"match_end":1456,"match_start":1319,"name":"GUANYLATE_CYCLASE_2"},{"dbname":"PROSITE_PROFILES","description":"Ras-associating (RA) domain profile.","id":"PS50200","interpro_description":"Ras-associating domain","interpro_id":"IPR000159","interpro_name":"RA_dom","locations":[{"end":360,"start":276}],"match_end":360,"match_start":276,"name":"RA"},{"dbname":"PROSITE_PROFILES","description":"PPM-type phosphatase domain profile.","id":"PS51746","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":1262,"start":982}],"match_end":1262,"match_start":982,"name":"PPM_2"},{"dbname":"SMART","id":"SM00332","interpro_description":"PPM-type phosphatase-like domain","interpro_id":"IPR001932","interpro_name":"PPM-type_phosphatase-like_dom","locations":[{"end":1260,"start":972}],"match_end":1260,"match_start":972,"name":"PP2C_4"},{"dbname":"SMART","id":"SM00044","interpro_description":"Adenylyl cyclase class-3/4/guanylyl cyclase","interpro_id":"IPR001054","interpro_name":"A/G_cyclase","locations":[{"end":1493,"start":1286}],"match_end":1493,"match_start":1286,"name":"cyc_6"},{"dbname":"SMART","id":"SM00369","interpro_description":"Leucine-rich repeat, typical subtype","interpro_id":"IPR003591","interpro_name":"Leu-rich_rpt_typical-subtyp","locations":[{"end":482,"start":459},{"end":531,"start":508},{"end":601,"start":554},{"end":689,"start":667},{"end":736,"start":713},{"end":834,"start":812},{"end":859,"start":836},{"end":903,"start":882}],"match_end":903,"match_start":459,"name":"LRR_typ_2"},{"dbname":"SMART","id":"SM00314","interpro_description":"Ras-associating domain","interpro_id":"IPR000159","interpro_name":"RA_dom","locations":[{"end":358,"start":276}],"match_end":358,"match_start":276,"name":"RA_5"},{"dbname":"SMART","id":"SM00365","locations":[{"end":599,"start":578},{"end":857,"start":836}],"match_end":857,"match_start":578,"name":"LRR_sd22_2"},{"dbname":"SMART","id":"SM00364","locations":[{"end":479,"start":459},{"end":527,"start":508},{"end":597,"start":578},{"end":686,"start":668},{"end":732,"start":713},{"end":831,"start":812},{"end":855,"start":836}],"match_end":855,"match_start":459,"name":"LRR_bac_2"},{"dbname":"SUPERFAMILY","id":"SSF81606","interpro_description":"PPM-type phosphatase-like domain superfamily","interpro_id":"IPR036457","interpro_name":"PPM-type-like_dom_sf","locations":[{"end":1263,"start":970}],"match_end":1263,"match_start":970,"name":"PP2C-like"},{"dbname":"SUPERFAMILY","id":"SSF52058","locations":[{"end":748,"start":402},{"end":928,"start":773}],"match_end":928,"match_start":402,"name":"L domain-like"},{"dbname":"SUPERFAMILY","id":"SSF55073","interpro_description":"Nucleotide cyclase","interpro_id":"IPR029787","interpro_name":"Nucleotide_cyclase","locations":[{"end":1533,"start":1310}],"match_end":1533,"match_start":1310,"name":"Nucleotide cyclase"},{"dbname":"GENE3D","id":"G3DSA:3.30.70.1230","interpro_description":"Nucleotide cyclase","interpro_id":"IPR029787","interpro_name":"Nucleotide_cyclase","locations":[{"end":1533,"start":1308}],"match_end":1533,"match_start":1308,"name":"Nucleotide cyclase"},{"dbname":"GENE3D","id":"G3DSA:3.60.40.10","interpro_description":"PPM-type phosphatase-like domain superfamily","interpro_id":"IPR036457","interpro_name":"PPM-type-like_dom_sf","locations":[{"end":1267,"start":976}],"match_end":1267,"match_start":976},{"dbname":"GENE3D","id":"G3DSA:3.80.10.10","interpro_description":"Leucine-rich repeat domain superfamily","interpro_id":"IPR032675","interpro_name":"LRR_dom_sf","locations":[{"end":970,"start":376}],"match_end":970,"match_start":376,"name":"Ribonuclease Inhibitor"},{"dbname":"PANTHER","id":"PTHR48004","interpro_description":"Stomatal Development and Plant Interaction Regulator","interpro_id":"IPR052941","interpro_name":"StomDev_PlantInt_Reg","locations":[{"end":680,"start":507}],"match_end":680,"match_start":507,"name":"OS01G0149700 PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":37,"start":1},{"end":188,"start":51}],"match_end":188,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":114,"start":96}],"match_end":114,"match_start":96,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":10,"start":1},{"end":65,"start":52},{"end":128,"start":117},{"end":186,"start":168}],"match_end":186,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":163,"start":150}],"match_end":163,"match_start":150,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1266739,"start_pos":1261715,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":27,"start":18}},{"range":{"end":113,"start":95}},{"range":{"end":149,"start":138}},{"range":{"end":325,"start":310}},{"range":{"end":469,"start":453}},{"range":{"end":516,"start":497}},{"range":{"end":894,"start":883}},{"range":{"end":1073,"start":1059}},{"range":{"end":1297,"start":1283}},{"range":{"end":1564,"start":1553}}],"name":"cyr1","ortholog_annotations":[{"gene_uniquename":"SJAG_01254","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19C7.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01254","ortholog_taxonid":4932,"ortholog_uniquename":"YJL005W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01254","ortholog_taxonid":4932,"ortholog_uniquename":"YJL005W","reference_uniquename":"PMID:26896847"}],"product":"adenylate cyclase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524","GO:0030145","GO:0000287"],"not-binding":["GO:0004016"]}},"subset_termids":["GO:0000747","GO:0005886","GO:0009975","GO:0006355","GO:0023052","GO:0016829","GO:0006351","GO:0055086"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000122":null,"GO:0000287":null,"GO:0004016":null,"GO:0005524":null,"GO:0005737":null,"GO:0005886":null,"GO:0009190":null,"GO:0010515":null,"GO:0010619":null,"GO:0030145":null,"GO:0035556":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01254.1"],"transcripts_by_uniquename":{"SJAG_01254.1":null},"uniprot_identifier":"B6K065","uniquename":"SJAG_01254"}


id: SJAG_01255
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106275],"is_not":false,"summary":null,"term":"GO:0090334"}],"cellular_component":[{"annotations":[106272],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[106273],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[106274],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01255","InterPro:IPR018809","UniProtKB/TrEMBL:B6K066","EnsemblGenomes-Tr:EEB06216"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":69,"start":1}},{"range":{"end":146,"start":124}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"fyv7","uniquename":"SJAG_01250"},{"name":"atg10","uniquename":"SJAG_01251"},{"name":"mni1","uniquename":"SJAG_01252"},{"name":"ubr1","uniquename":"SJAG_01253"},{"name":"cyr1","uniquename":"SJAG_01254"},{"name":"gsr1","uniquename":"SJAG_01255"},{"uniquename":"SJAG_05617"},{"name":"rcr1","uniquename":"SJAG_01258"},{"name":"prs1","uniquename":"SJAG_01259"},{"name":"sen34","uniquename":"SJAG_01260"},{"name":"ppm2","uniquename":"SJAG_01261"}],"genes_by_uniquename":{"SJAG_01255":null,"SPBC19C7.04c":null,"YGR273C":null,"YMR295C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Uncharacterised protein (DUF2406)","id":"PF10295","interpro_description":"Protein of unknown function DUF2406","interpro_id":"IPR018809","interpro_name":"DUF2406","locations":[{"end":90,"start":32}],"match_end":90,"match_start":32,"name":"DUF2406"},{"dbname":"PANTHER","id":"PTHR28186","interpro_description":"Protein of unknown function DUF2406","interpro_id":"IPR018809","interpro_name":"DUF2406","locations":[{"end":146,"start":8}],"match_end":146,"match_start":8,"name":"MEIOTICALLY UP-REGULATED GENE 9 PROTEIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":69,"start":1},{"end":146,"start":124}],"match_end":146,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":28,"start":18},{"end":146,"start":126}],"match_end":146,"match_start":18,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":55,"start":46}],"match_end":55,"match_start":46,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":17,"start":1}],"match_end":17,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1267950,"start_pos":1267510,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":14,"start":4}}],"name":"gsr1","ortholog_annotations":[{"gene_uniquename":"SJAG_01255","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19C7.04c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01255","ortholog_taxonid":4932,"ortholog_uniquename":"YGR273C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01255","ortholog_taxonid":4932,"ortholog_uniquename":"YMR295C","reference_uniquename":"PMID:29761456"}],"product":"1,3-beta-glucan synthesis regulator, Gsr1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0071554","GO:0005829","GO:0005634","GO:0005975"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0032153":null,"GO:0090334":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01255.1"],"transcripts_by_uniquename":{"SJAG_01255.1":null},"uniprot_identifier":"B6K066","uniquename":"SJAG_01255"}


id: SJAG_01258
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106278],"is_not":false,"summary":null,"term":"GO:0006897"}],"cellular_component":[{"annotations":[106276],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[106277],"is_not":false,"summary":null,"term":"GO:0005886"}],"molecular_function":[{"annotations":[106279],"is_not":false,"summary":null,"term":"GO:0043495"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01258","UniProtKB/TrEMBL:B6K067","InterPro:IPR020999","EnsemblGenomes-Tr:EEB06217","GOA:B6K067"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":118,"start":50}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mni1","uniquename":"SJAG_01252"},{"name":"ubr1","uniquename":"SJAG_01253"},{"name":"cyr1","uniquename":"SJAG_01254"},{"name":"gsr1","uniquename":"SJAG_01255"},{"uniquename":"SJAG_05617"},{"name":"rcr1","uniquename":"SJAG_01258"},{"name":"prs1","uniquename":"SJAG_01259"},{"name":"sen34","uniquename":"SJAG_01260"},{"name":"ppm2","uniquename":"SJAG_01261"},{"name":"uve1","uniquename":"SJAG_01262"},{"name":"bqt4","uniquename":"SJAG_01263"}],"genes_by_uniquename":{"SJAG_01258":null,"SPBC19C7.05":null,"YBR005W":null,"YDR003W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Chitin synthesis regulation, resistance to Congo red","id":"PF12273","interpro_description":"Chitin synthesis regulation, Congo red resistance, RCR protein","interpro_id":"IPR020999","interpro_name":"Chitin_synth_reg_RCR","locations":[{"end":99,"start":23}],"match_end":99,"match_start":23,"name":"RCR"},{"dbname":"PANTHER","id":"PTHR28187","interpro_description":"Chitin synthesis regulation, Congo red resistance, RCR protein","interpro_id":"IPR020999","interpro_name":"Chitin_synth_reg_RCR","locations":[{"end":93,"start":7}],"match_end":93,"match_start":7,"name":"PROTEIN RCR1-RELATED"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":118,"start":50}],"match_end":118,"match_start":50,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1270341,"start_pos":1269985,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":9,"start":2}},{"range":{"end":117,"start":106}}],"name":"rcr1","ortholog_annotations":[{"gene_uniquename":"SJAG_01258","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19C7.05","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01258","ortholog_taxonid":4932,"ortholog_uniquename":"YBR005W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01258","ortholog_taxonid":4932,"ortholog_uniquename":"YDR003W","reference_uniquename":"PMID:29761456"}],"product":"plasma membrane adaptor for ubiquitin ligase Rcr1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0043495"]}},"subset_termids":["GO:0060090","GO:0016192","GO:0005886","GO:0005794"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005794":null,"GO:0005886":null,"GO:0006897":null,"GO:0043495":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":42,"start":20}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01258.1"],"transcripts_by_uniquename":{"SJAG_01258.1":null},"uniprot_identifier":"B6K067","uniquename":"SJAG_01258"}


id: SJAG_01259
data:
  {"cv_annotations":{"biological_process":[{"annotations":[57993],"is_not":false,"summary":null,"term":"GO:0106074"},{"annotations":[106282],"is_not":false,"summary":null,"term":"GO:0002181"}],"cellular_component":[{"annotations":[71028],"is_not":false,"summary":null,"term":"GO:0017101"},{"annotations":[106281],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[57988],"is_not":false,"summary":null,"term":"GO:0005524"},{"annotations":[106285],"is_not":false,"summary":null,"term":"GO:0043907"},{"annotations":[71026],"is_not":false,"summary":null,"term":"GO:0004827"}],"mondo":[{"annotations":[86335],"is_not":false,"summary":null,"term":"MONDO:0054782"}]},"dbxrefs":["InterPro:IPR002316","InterPro:IPR002314","InterPro:IPR016061","GOA:B6K068","InterPro:IPR007214","InterPro:IPR004154","UniProtKB/TrEMBL:B6K068","EnsemblGenomes-Gn:SJAG_01259","InterPro:IPR036621","InterPro:IPR006195","InterPro:IPR033721","EnsemblGenomes-Tr:EEB06218","InterPro:IPR017449","InterPro:IPR004499","InterPro:IPR036754"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ubr1","uniquename":"SJAG_01253"},{"name":"cyr1","uniquename":"SJAG_01254"},{"name":"gsr1","uniquename":"SJAG_01255"},{"uniquename":"SJAG_05617"},{"name":"rcr1","uniquename":"SJAG_01258"},{"name":"prs1","uniquename":"SJAG_01259"},{"name":"sen34","uniquename":"SJAG_01260"},{"name":"ppm2","uniquename":"SJAG_01261"},{"name":"uve1","uniquename":"SJAG_01262"},{"name":"bqt4","uniquename":"SJAG_01263"},{"name":"omh1","uniquename":"SJAG_01264"}],"genes_by_uniquename":{"HGNC:3418":null,"SJAG_01259":null,"SPBC19C7.06":null,"YHR020W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Prolyl-tRNA synthetase, C-terminal","id":"PF09180","interpro_description":"Proline-tRNA ligase, class II, C-terminal","interpro_id":"IPR016061","interpro_name":"Pro-tRNA_ligase_II_C","locations":[{"end":711,"start":621}],"match_end":711,"match_start":621,"name":"ProRS-C_1"},{"dbname":"PFAM","description":"Anticodon binding domain","id":"PF03129","interpro_description":"Anticodon-binding","interpro_id":"IPR004154","interpro_name":"Anticodon-bd","locations":[{"end":593,"start":495}],"match_end":593,"match_start":495,"name":"HGTP_anticodon"},{"dbname":"PFAM","description":"tRNA synthetase class II core domain (G, H, P, S and T)","id":"PF00587","interpro_description":"Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)","interpro_id":"IPR002314","interpro_name":"aa-tRNA-synt_IIb","locations":[{"end":475,"start":297}],"match_end":475,"match_start":297,"name":"tRNA-synt_2b"},{"dbname":"PFAM","description":"Aminoacyl-tRNA editing domain","id":"PF04073","interpro_description":"YbaK/aminoacyl-tRNA synthetase-associated domain","interpro_id":"IPR007214","interpro_name":"YbaK/aa-tRNA-synth-assoc-dom","locations":[{"end":156,"start":33}],"match_end":156,"match_start":33,"name":"tRNA_edit"},{"dbname":"CDD","description":"ProRS_anticodon_zinc","id":"cd00862","locations":[{"end":711,"start":484}],"match_end":711,"match_start":484,"name":"ProRS_anticodon_zinc"},{"dbname":"CDD","description":"ProRS_core_arch_euk","id":"cd00778","interpro_description":"Prolyl-tRNA synthetase, catalytic domain","interpro_id":"IPR033721","interpro_name":"ProRS_core_arch_euk","locations":[{"end":478,"start":210}],"match_end":478,"match_start":210,"name":"ProRS_core_arch_euk"},{"dbname":"PROSITE_PROFILES","description":"Aminoacyl-transfer RNA synthetases class-II family profile.","id":"PS50862","interpro_description":"Aminoacyl-tRNA synthetase, class II","interpro_id":"IPR006195","interpro_name":"aa-tRNA-synth_II","locations":[{"end":488,"start":243}],"match_end":488,"match_start":243,"name":"AA_TRNA_LIGASE_II"},{"dbname":"SMART","id":"SM00946","interpro_description":"Proline-tRNA ligase, class II, C-terminal","interpro_id":"IPR016061","interpro_name":"Pro-tRNA_ligase_II_C","locations":[{"end":711,"start":621}],"match_end":711,"match_start":621,"name":"ProRS_C_1_2"},{"dbname":"PRINTS","description":"Prolyl-tRNA synthetase signature","id":"PR01046","interpro_description":"Proline-tRNA ligase, class IIa","interpro_id":"IPR002316","interpro_name":"Pro-tRNA-ligase_IIa","locations":[{"end":280,"start":262},{"end":314,"start":303},{"end":341,"start":333},{"end":354,"start":343}],"match_end":354,"match_start":262,"name":"TRNASYNTHPRO"},{"dbname":"FUNFAM","description":"bifunctional glutamate/proline--tRNA ligase","id":"G3DSA:3.40.50.800:FF:000005","locations":[{"end":612,"start":489}],"match_end":612,"match_start":489},{"dbname":"FUNFAM","description":"Bifunctional glutamate/proline--tRNA ligase","id":"G3DSA:3.30.110.30:FF:000001","locations":[{"end":711,"start":615}],"match_end":711,"match_start":615},{"dbname":"FUNFAM","description":"Bifunctional glutamate/proline--tRNA ligase","id":"G3DSA:3.30.930.10:FF:000007","locations":[{"end":488,"start":203}],"match_end":488,"match_start":203},{"dbname":"SUPERFAMILY","id":"SSF55681","interpro_description":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_id":"IPR045864","interpro_name":"aa-tRNA-synth_II/BPL/LPL","locations":[{"end":482,"start":210}],"match_end":482,"match_start":210,"name":"Class II aaRS and biotin synthetases"},{"dbname":"SUPERFAMILY","id":"SSF52954","locations":[{"end":613,"start":483}],"match_end":613,"match_start":483,"name":"Class II aaRS ABD-related"},{"dbname":"SUPERFAMILY","id":"SSF55826","interpro_description":"YbaK/aminoacyl-tRNA synthetase-associated domain superfamily","interpro_id":"IPR036754","interpro_name":"YbaK/aa-tRNA-synt-asso_dom_sf","locations":[{"end":171,"start":5}],"match_end":171,"match_start":5,"name":"YbaK/ProRS associated domain"},{"dbname":"SUPERFAMILY","id":"SSF64586","interpro_description":"Prolyl-tRNA synthetase, class II","interpro_id":"IPR017449","interpro_name":"Pro-tRNA_synth_II","locations":[{"end":711,"start":615}],"match_end":711,"match_start":615,"name":"C-terminal domain of ProRS"},{"dbname":"GENE3D","id":"G3DSA:3.30.930.10","interpro_description":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_id":"IPR045864","interpro_name":"aa-tRNA-synth_II/BPL/LPL","locations":[{"end":488,"start":203}],"match_end":488,"match_start":203,"name":"Bira Bifunctional Protein; Domain 2"},{"dbname":"GENE3D","id":"G3DSA:3.90.960.10","interpro_description":"YbaK/aminoacyl-tRNA synthetase-associated domain superfamily","interpro_id":"IPR036754","interpro_name":"YbaK/aa-tRNA-synt-asso_dom_sf","locations":[{"end":176,"start":1}],"match_end":176,"match_start":1},{"dbname":"GENE3D","id":"G3DSA:3.40.50.800","interpro_description":"Anticodon-binding domain superfamily","interpro_id":"IPR036621","interpro_name":"Anticodon-bd_dom_sf","locations":[{"end":612,"start":489}],"match_end":612,"match_start":489},{"dbname":"GENE3D","id":"G3DSA:3.30.110.30","interpro_description":"Prolyl-tRNA synthetase, class II","interpro_id":"IPR017449","interpro_name":"Pro-tRNA_synth_II","locations":[{"end":711,"start":615}],"match_end":711,"match_start":615},{"dbname":"PANTHER","id":"PTHR43382","interpro_description":"Proline-tRNA ligase, class IIa, archaeal-type","interpro_id":"IPR004499","interpro_name":"Pro-tRNA-ligase_IIa_arc-type","locations":[{"end":711,"start":179}],"match_end":711,"match_start":179,"name":"PROLYL-TRNA SYNTHETASE"},{"dbname":"HAMAP","description":"Proline--tRNA ligase [proS].","id":"MF_01571","interpro_description":"Proline-tRNA ligase, class IIa, archaeal-type","interpro_id":"IPR004499","interpro_name":"Pro-tRNA-ligase_IIa_arc-type","locations":[{"end":711,"start":204}],"match_end":711,"match_start":204,"name":"Pro_tRNA_synth_type3"},{"dbname":"NCBIFAM","description":"proline--tRNA ligase","id":"TIGR00408","interpro_description":"Proline-tRNA ligase, class IIa, archaeal-type","interpro_id":"IPR004499","interpro_name":"Pro-tRNA-ligase_IIa_arc-type","locations":[{"end":711,"start":205}],"match_end":711,"match_start":205,"name":"proS_fam_I"}],"location":{"chromosome_name":"supercont5.3","end_pos":1273393,"start_pos":1271258,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":59,"start":45}},{"range":{"end":193,"start":172}}],"name":"prs1","ortholog_annotations":[{"gene_uniquename":"SJAG_01259","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3418","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01259","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19C7.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01259","ortholog_taxonid":4932,"ortholog_uniquename":"YHR020W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01259","ortholog_taxonid":4932,"ortholog_uniquename":"YHR020W","reference_uniquename":"PMID:26896847"}],"product":"cytoplasmic proline-tRNA ligase Prs1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005524"],"not-binding":["GO:0004827","GO:0043907"]}},"subset_termids":["GO:0002181","GO:0016874","GO:0140098","GO:0005829","GO:0006399","MONDO:0005559","GO:0140101"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0004827":null,"GO:0005524":null,"GO:0005829":null,"GO:0017101":null,"GO:0043907":null,"GO:0106074":null,"MONDO:0054782":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01259.1"],"transcripts_by_uniquename":{"SJAG_01259.1":null},"uniprot_identifier":"B6K068","uniquename":"SJAG_01259"}


id: SJAG_01260
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":196,"start":196}},{"assigned_by":"UniProtKB","range":{"end":204,"start":204}},{"assigned_by":"UniProtKB","range":{"end":235,"start":235}}],"cv_annotations":{"biological_process":[{"annotations":[73285],"is_not":false,"summary":null,"term":"GO:0000379"}],"cellular_component":[{"annotations":[106287],"is_not":false,"summary":null,"term":"GO:0032473"},{"annotations":[60718],"is_not":false,"summary":null,"term":"GO:0000214"}],"molecular_function":[{"annotations":[73284],"is_not":false,"summary":null,"term":"GO:0000213"}],"mondo":[{"annotations":[87407],"is_not":false,"summary":null,"term":"MONDO:0012891"}]},"dbxrefs":["InterPro:IPR036167","EnsemblGenomes-Gn:SJAG_01260","UniProtKB/TrEMBL:B6K069","GOA:B6K069","InterPro:IPR006677","EnsemblGenomes-Tr:EEB06219","InterPro:IPR011856","InterPro:IPR016690"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":139,"start":118}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"cyr1","uniquename":"SJAG_01254"},{"name":"gsr1","uniquename":"SJAG_01255"},{"uniquename":"SJAG_05617"},{"name":"rcr1","uniquename":"SJAG_01258"},{"name":"prs1","uniquename":"SJAG_01259"},{"name":"sen34","uniquename":"SJAG_01260"},{"name":"ppm2","uniquename":"SJAG_01261"},{"name":"uve1","uniquename":"SJAG_01262"},{"name":"bqt4","uniquename":"SJAG_01263"},{"name":"omh1","uniquename":"SJAG_01264"},{"name":"ess1","uniquename":"SJAG_01266"}],"genes_by_uniquename":{"HGNC:15506":null,"SJAG_01260":null,"SPBC19C7.07c":null,"YAR008W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"tRNA intron endonuclease, catalytic C-terminal domain","id":"PF01974","interpro_description":"tRNA intron endonuclease, catalytic domain-like","interpro_id":"IPR006677","interpro_name":"tRNA_intron_Endonuc_cat-like","locations":[{"end":245,"start":168}],"match_end":245,"match_start":168,"name":"tRNA_int_endo"},{"dbname":"CDD","description":"tRNA-intron_lyase_C","id":"cd22363","interpro_description":"tRNA intron endonuclease, catalytic domain-like","interpro_id":"IPR006677","interpro_name":"tRNA_intron_Endonuc_cat-like","locations":[{"end":262,"start":166}],"match_end":262,"match_start":166,"name":"tRNA-intron_lyase_C"},{"dbname":"FUNFAM","description":"tRNA-splicing endonuclease subunit Sen34","id":"G3DSA:3.40.1350.10:FF:000008","locations":[{"end":264,"start":167}],"match_end":264,"match_start":167},{"dbname":"SUPERFAMILY","id":"SSF53032","interpro_description":"tRNA intron endonuclease, catalytic domain-like superfamily","interpro_id":"IPR036167","interpro_name":"tRNA_intron_Endo_cat-like_sf","locations":[{"end":246,"start":168}],"match_end":246,"match_start":168,"name":"tRNA-intron endonuclease catalytic domain-like"},{"dbname":"GENE3D","id":"G3DSA:3.40.1350.10","interpro_description":"tRNA endonuclease-like domain superfamily","interpro_id":"IPR011856","interpro_name":"tRNA_endonuc-like_dom_sf","locations":[{"end":264,"start":167}],"match_end":264,"match_start":167},{"dbname":"PANTHER","id":"PTHR13070","locations":[{"end":266,"start":4}],"match_end":266,"match_start":4,"name":"TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN34-RELATED"},{"dbname":"PIRSF","id":"PIRSF017250","interpro_description":"tRNA-splicing endonuclease, SEN34 subunit","interpro_id":"IPR016690","interpro_name":"tRNA_splic_SEN34","locations":[{"end":266,"start":1}],"match_end":266,"match_start":1,"name":"tRNA_endo_SEN34"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":139,"start":118}],"match_end":139,"match_start":118,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1274328,"start_pos":1273528,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":131,"start":124}}],"name":"sen34","ortholog_annotations":[{"gene_uniquename":"SJAG_01260","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:15506","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01260","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19C7.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01260","ortholog_taxonid":4932,"ortholog_uniquename":"YAR008W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01260","ortholog_taxonid":4932,"ortholog_uniquename":"YAR008W","reference_uniquename":"PMID:26896847"}],"product":"tRNA-splicing endonuclease catalytic subunit Sen34","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0000213"]}},"subset_termids":["GO:0005739","MONDO:0020022","GO:0005634","MONDO:0005559","GO:0140101","GO:0140098","GO:0006399","GO:0016829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000213":null,"GO:0000214":null,"GO:0000379":null,"GO:0032473":null,"MONDO:0012891":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01260.1"],"transcripts_by_uniquename":{"SJAG_01260.1":null},"uniprot_identifier":"B6K069","uniquename":"SJAG_01260"}


id: SJAG_01261
data:
  {"cv_annotations":{"biological_process":[{"annotations":[74053],"is_not":false,"summary":null,"term":"GO:0030488"},{"annotations":[74054],"is_not":false,"summary":null,"term":"GO:0031591"}],"cellular_component":[{"annotations":[106291],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[106292],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[74052],"is_not":false,"summary":null,"term":"GO:0008175"}]},"dbxrefs":["InterPro:IPR015915","EnsemblGenomes-Gn:SJAG_01261","InterPro:IPR011043","InterPro:IPR007213","UniProtKB/TrEMBL:B6K070","EnsemblGenomes-Tr:EEB06220","InterPro:IPR029063","GOA:B6K070"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"gsr1","uniquename":"SJAG_01255"},{"uniquename":"SJAG_05617"},{"name":"rcr1","uniquename":"SJAG_01258"},{"name":"prs1","uniquename":"SJAG_01259"},{"name":"sen34","uniquename":"SJAG_01260"},{"name":"ppm2","uniquename":"SJAG_01261"},{"name":"uve1","uniquename":"SJAG_01262"},{"name":"bqt4","uniquename":"SJAG_01263"},{"name":"omh1","uniquename":"SJAG_01264"},{"name":"ess1","uniquename":"SJAG_01266"},{"name":"orc6","uniquename":"SJAG_01267"}],"genes_by_uniquename":{"HGNC:17558":null,"SJAG_01261":null,"SPBC19C7.08c":null,"YOL141W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Galactose oxidase, central domain","id":"PF13418","locations":[{"end":448,"start":403}],"match_end":448,"match_start":403,"name":"Kelch_4"},{"dbname":"PFAM","description":"Leucine carboxyl methyltransferase","id":"PF04072","interpro_description":"Methyltransferase Ppm1/Ppm2/Tcmp","interpro_id":"IPR007213","interpro_name":"Ppm1/Ppm2/Tcmp","locations":[{"end":200,"start":37}],"match_end":200,"match_start":37,"name":"LCM"},{"dbname":"SUPERFAMILY","id":"SSF50965","interpro_description":"Galactose oxidase/kelch, beta-propeller","interpro_id":"IPR011043","interpro_name":"Gal_Oxase/kelch_b-propeller","locations":[{"end":659,"start":351}],"match_end":659,"match_start":351,"name":"Galactose oxidase, central domain"},{"dbname":"SUPERFAMILY","id":"SSF53335","interpro_description":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_id":"IPR029063","interpro_name":"SAM-dependent_MTases_sf","locations":[{"end":308,"start":4}],"match_end":308,"match_start":4,"name":"S-adenosyl-L-methionine-dependent methyltransferases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.150","interpro_description":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_id":"IPR029063","interpro_name":"SAM-dependent_MTases_sf","locations":[{"end":313,"start":1}],"match_end":313,"match_start":1,"name":"Vaccinia Virus protein VP39"},{"dbname":"GENE3D","id":"G3DSA:2.120.10.80","interpro_description":"Kelch-type beta propeller","interpro_id":"IPR015915","interpro_name":"Kelch-typ_b-propeller","locations":[{"end":678,"start":338}],"match_end":678,"match_start":338},{"dbname":"PANTHER","id":"PTHR46529","locations":[{"end":678,"start":3}],"match_end":678,"match_start":3,"name":"TRNA WYBUTOSINE-SYNTHESIZING PROTEIN 4"}],"location":{"chromosome_name":"supercont5.3","end_pos":1276881,"start_pos":1274839,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":62,"start":51}},{"range":{"end":146,"start":130}},{"range":{"end":402,"start":389}},{"range":{"end":524,"start":511}}],"name":"ppm2","ortholog_annotations":[{"gene_uniquename":"SJAG_01261","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17558","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01261","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19C7.08c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01261","ortholog_taxonid":4932,"ortholog_uniquename":"YOL141W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01261","ortholog_taxonid":4932,"ortholog_uniquename":"YOL141W","reference_uniquename":"PMID:26896847"}],"product":"tRNA methyltransferase Ppm2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008175"]}},"subset_termids":["GO:0016741","GO:0005634","GO:0006399","GO:0005829","GO:0140098","GO:0140101"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0008175":null,"GO:0030488":null,"GO:0031591":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01261.1"],"transcripts_by_uniquename":{"SJAG_01261.1":null},"uniprot_identifier":"B6K070","uniquename":"SJAG_01261"}


id: SJAG_01262
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106299],"is_not":false,"summary":null,"term":"GO:0006284"},{"annotations":[106300],"is_not":false,"summary":null,"term":"GO:0006298"},{"annotations":[71595],"is_not":false,"summary":null,"term":"GO:0043504"},{"annotations":[58716],"is_not":false,"summary":null,"term":"GO:0006289"},{"annotations":[106303],"is_not":false,"summary":null,"term":"GO:0006290"},{"annotations":[106304],"is_not":false,"summary":null,"term":"GO:0070914"}],"cellular_component":[{"annotations":[106296],"is_not":false,"summary":null,"term":"GO:0000262"},{"annotations":[71596],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[106305],"is_not":false,"summary":null,"term":"GO:0033892"},{"annotations":[106307],"is_not":false,"summary":null,"term":"GO:0000404"}]},"dbxrefs":["GOA:B6K071","EnsemblGenomes-Gn:SJAG_01262","EnsemblGenomes-Tr:EEB06221","InterPro:IPR004601","InterPro:IPR036237","UniProtKB/TrEMBL:B6K071"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":65,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_05617"},{"name":"rcr1","uniquename":"SJAG_01258"},{"name":"prs1","uniquename":"SJAG_01259"},{"name":"sen34","uniquename":"SJAG_01260"},{"name":"ppm2","uniquename":"SJAG_01261"},{"name":"uve1","uniquename":"SJAG_01262"},{"name":"bqt4","uniquename":"SJAG_01263"},{"name":"omh1","uniquename":"SJAG_01264"},{"name":"ess1","uniquename":"SJAG_01266"},{"name":"orc6","uniquename":"SJAG_01267"},{"name":"arp3","uniquename":"SJAG_01268"}],"genes_by_uniquename":{"SJAG_01262":null,"SPBC19C7.09c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"UV-endonuclease UvdE","id":"PF03851","interpro_description":"UV-endonuclease UvdE","interpro_id":"IPR004601","interpro_name":"UvdE","locations":[{"end":411,"start":135}],"match_end":411,"match_start":135,"name":"UvdE"},{"dbname":"SUPERFAMILY","id":"SSF51658","interpro_description":"Xylose isomerase-like superfamily","interpro_id":"IPR036237","interpro_name":"Xyl_isomerase-like_sf","locations":[{"end":355,"start":208}],"match_end":355,"match_start":208,"name":"Xylose isomerase-like"},{"dbname":"GENE3D","id":"G3DSA:3.20.20.150","locations":[{"end":437,"start":133}],"match_end":437,"match_start":133},{"dbname":"PANTHER","id":"PTHR31290","interpro_description":"UV-endonuclease UvdE","interpro_id":"IPR004601","interpro_name":"UvdE","locations":[{"end":439,"start":39}],"match_end":439,"match_start":39,"name":"UV-DAMAGE ENDONUCLEASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":65,"start":1}],"match_end":65,"match_start":1,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"UV DNA damage repair endonuclease UvsE","id":"TIGR00629","interpro_description":"UV-endonuclease UvdE","interpro_id":"IPR004601","interpro_name":"UvdE","locations":[{"end":432,"start":131}],"match_end":432,"match_start":131,"name":"uvde"}],"location":{"chromosome_name":"supercont5.3","end_pos":1278637,"start_pos":1277260,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":53,"start":40}},{"range":{"end":121,"start":73}}],"name":"uve1","ortholog_annotations":[{"gene_uniquename":"SJAG_01262","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19C7.09c","reference_uniquename":"PMID:21511999"}],"product":"endonuclease Uve1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0000404"],"not-binding":["GO:0033892"]}},"subset_termids":["GO:0005739","GO:0140097","GO:0007005","GO:0005694","GO:0005634","GO:0006281","GO:0016788"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000262":null,"GO:0000404":null,"GO:0005634":null,"GO:0006284":null,"GO:0006289":null,"GO:0006290":null,"GO:0006298":null,"GO:0033892":null,"GO:0043504":null,"GO:0070914":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01262.1"],"transcripts_by_uniquename":{"SJAG_01262.1":null},"uniprot_identifier":"B6K071","uniquename":"SJAG_01262"}


id: SJAG_01263
data:
  {"coiled_coil_coords":[{"range":{"end":421,"start":401}}],"cv_annotations":{"biological_process":[{"annotations":[64739],"is_not":false,"summary":null,"term":"GO:0070197"},{"annotations":[76446],"is_not":false,"summary":null,"term":"GO:0044820"},{"annotations":[106318],"is_not":false,"summary":null,"term":"GO:0071763"},{"annotations":[106319],"is_not":false,"summary":null,"term":"GO:0000723"}],"cellular_component":[{"annotations":[76447],"is_not":false,"summary":null,"term":"GO:1990862"}],"molecular_function":[{"annotations":[64737],"is_not":false,"summary":null,"term":"GO:0003677"},{"annotations":[106322],"is_not":false,"summary":null,"term":"GO:0070300"},{"annotations":[106323],"is_not":false,"summary":null,"term":"GO:0140473"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06222","InterPro:IPR036887","UniProtKB/TrEMBL:B6K072","EnsemblGenomes-Gn:SJAG_01263","InterPro:IPR003163","InterPro:IPR018004","GOA:B6K072","InterPro:IPR037548"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":385,"start":142}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"rcr1","uniquename":"SJAG_01258"},{"name":"prs1","uniquename":"SJAG_01259"},{"name":"sen34","uniquename":"SJAG_01260"},{"name":"ppm2","uniquename":"SJAG_01261"},{"name":"uve1","uniquename":"SJAG_01262"},{"name":"bqt4","uniquename":"SJAG_01263"},{"name":"omh1","uniquename":"SJAG_01264"},{"name":"ess1","uniquename":"SJAG_01266"},{"name":"orc6","uniquename":"SJAG_01267"},{"name":"arp3","uniquename":"SJAG_01268"},{"name":"trm7","uniquename":"SJAG_01269"}],"genes_by_uniquename":{"SJAG_01263":null,"SPBC19C7.10":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PROSITE_PROFILES","description":"APSES-type HTH DNA-binding domain profile.","id":"PS51299","interpro_description":"Transcription regulator HTH, APSES-type DNA-binding domain","interpro_id":"IPR003163","interpro_name":"Tscrpt_reg_HTH_APSES-type","locations":[{"end":147,"start":38}],"match_end":147,"match_start":38,"name":"HTH_APSES"},{"dbname":"SMART","id":"SM01252","interpro_description":"KilA/APSES-type HTH, DNA-binding","interpro_id":"IPR018004","interpro_name":"KilA/APSES_HTH","locations":[{"end":140,"start":59}],"match_end":140,"match_start":59,"name":"KilA_N_2"},{"dbname":"SUPERFAMILY","id":"SSF54616","interpro_description":"HTH APSES-type DNA-binding domain superfamily","interpro_id":"IPR036887","interpro_name":"HTH_APSES_sf","locations":[{"end":152,"start":47}],"match_end":152,"match_start":47,"name":"DNA-binding domain of Mlu1-box binding protein MBP1"},{"dbname":"PANTHER","id":"PTHR38044","interpro_description":"Bouquet formation protein 4","interpro_id":"IPR037548","interpro_name":"Bqt4","locations":[{"end":435,"start":1}],"match_end":435,"match_start":1,"name":"BOUQUET FORMATION PROTEIN 4"},{"dbname":"COILS","id":"Coil","locations":[{"end":421,"start":401}],"match_end":421,"match_start":401,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":385,"start":142}],"match_end":385,"match_start":142,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":197,"start":177},{"end":305,"start":293},{"end":368,"start":351}],"match_end":368,"match_start":177,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":281,"start":266}],"match_end":281,"match_start":266,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":331,"start":321},{"end":350,"start":339}],"match_end":350,"match_start":321,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":265,"start":230}],"match_end":265,"match_start":230,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":171,"start":158}],"match_end":171,"match_start":158,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1280539,"start_pos":1278891,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":196,"start":176}},{"range":{"end":231,"start":217}},{"range":{"end":279,"start":255}},{"range":{"end":305,"start":292}},{"range":{"end":367,"start":350}},{"range":{"end":428,"start":414}}],"name":"bqt4","ortholog_annotations":[{"gene_uniquename":"SJAG_01263","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19C7.10","reference_uniquename":"PMID:21511999"}],"product":"integral nuclear inner membrane protein Bqt4","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003677","GO:0070300"],"not-binding":["GO:0140473"]}},"subset_termids":["GO:0005634","GO:0032200","GO:0140013","GO:0060090","GO:0061024","GO:0008289"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000723":null,"GO:0003677":null,"GO:0044820":null,"GO:0070197":null,"GO:0070300":null,"GO:0071763":null,"GO:0140473":null,"GO:1990862":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":434,"start":417}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01263.1"],"transcripts_by_uniquename":{"SJAG_01263.1":null},"uniprot_identifier":"B6K072","uniquename":"SJAG_01263"}


id: SJAG_01264
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":287,"start":287}}],"cv_annotations":{"biological_process":[{"annotations":[77421],"is_not":false,"summary":null,"term":"GO:0000032"},{"annotations":[77419],"is_not":false,"summary":null,"term":"GO:0006487"},{"annotations":[106327],"is_not":false,"summary":null,"term":"GO:0035269"}],"cellular_component":[{"annotations":[106324],"is_not":false,"summary":null,"term":"GO:0000139"}],"molecular_function":[{"annotations":[77417],"is_not":false,"summary":null,"term":"GO:0000026"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01264","GOA:B6K073","InterPro:IPR002685","UniProtKB/TrEMBL:B6K073","InterPro:IPR029044","EnsemblGenomes-Tr:EEB06223"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"prs1","uniquename":"SJAG_01259"},{"name":"sen34","uniquename":"SJAG_01260"},{"name":"ppm2","uniquename":"SJAG_01261"},{"name":"uve1","uniquename":"SJAG_01262"},{"name":"bqt4","uniquename":"SJAG_01263"},{"name":"omh1","uniquename":"SJAG_01264"},{"name":"ess1","uniquename":"SJAG_01266"},{"name":"orc6","uniquename":"SJAG_01267"},{"name":"arp3","uniquename":"SJAG_01268"},{"name":"trm7","uniquename":"SJAG_01269"},{"name":"ypa1","uniquename":"SJAG_01270"}],"genes_by_uniquename":{"SJAG_01264":null,"SPBC19C7.12c":null,"YBR199W":null,"YBR205W":null,"YDR483W":null,"YJL139C":null,"YKR061W":null,"YOR099W":null,"YPL053C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Glycolipid 2-alpha-mannosyltransferase","id":"PF01793","interpro_description":"Glycosyl transferase, family 15","interpro_id":"IPR002685","interpro_name":"Glyco_trans_15","locations":[{"end":346,"start":53}],"match_end":346,"match_start":53,"name":"Glyco_transf_15"},{"dbname":"FUNFAM","description":"Alpha-1,2-mannosyltransferase (Ktr4)","id":"G3DSA:3.90.550.10:FF:000051","locations":[{"end":396,"start":60}],"match_end":396,"match_start":60},{"dbname":"SUPERFAMILY","id":"SSF53448","interpro_description":"Nucleotide-diphospho-sugar transferases","interpro_id":"IPR029044","interpro_name":"Nucleotide-diphossugar_trans","locations":[{"end":394,"start":71}],"match_end":394,"match_start":71,"name":"Nucleotide-diphospho-sugar transferases"},{"dbname":"GENE3D","id":"G3DSA:3.90.550.10","interpro_description":"Nucleotide-diphospho-sugar transferases","interpro_id":"IPR029044","interpro_name":"Nucleotide-diphossugar_trans","locations":[{"end":398,"start":57}],"match_end":398,"match_start":57,"name":"Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A"},{"dbname":"PANTHER","id":"PTHR31121","interpro_description":"Glycosyl transferase, family 15","interpro_id":"IPR002685","interpro_name":"Glyco_trans_15","locations":[{"end":393,"start":7}],"match_end":393,"match_start":7,"name":"ALPHA-1,2 MANNOSYLTRANSFERASE KTR1"},{"dbname":"PIRSF","id":"PIRSF018153","interpro_description":"Glycosyl transferase, family 15","interpro_id":"IPR002685","interpro_name":"Glyco_trans_15","locations":[{"end":397,"start":8}],"match_end":397,"match_start":8,"name":"Glycolip_mannosyltransf_fung"}],"location":{"chromosome_name":"supercont5.3","end_pos":1282908,"start_pos":1281712,"strand":"reverse"},"name":"omh1","ortholog_annotations":[{"gene_uniquename":"SJAG_01264","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19C7.12c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01264","ortholog_taxonid":4932,"ortholog_uniquename":"YBR199W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01264","ortholog_taxonid":4932,"ortholog_uniquename":"YBR205W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01264","ortholog_taxonid":4932,"ortholog_uniquename":"YBR205W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01264","ortholog_taxonid":4932,"ortholog_uniquename":"YDR483W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01264","ortholog_taxonid":4932,"ortholog_uniquename":"YDR483W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01264","ortholog_taxonid":4932,"ortholog_uniquename":"YJL139C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01264","ortholog_taxonid":4932,"ortholog_uniquename":"YKR061W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01264","ortholog_taxonid":4932,"ortholog_uniquename":"YOR099W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01264","ortholog_taxonid":4932,"ortholog_uniquename":"YOR099W","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01264","ortholog_taxonid":4932,"ortholog_uniquename":"YPL053C","reference_uniquename":"PMID:29761456"}],"product":"Golgi alpha-1,2-mannosyltransferase Omh1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0000026"]}},"subset_termids":["GO:0005794","GO:0006486","GO:0071554","GO:0016757"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000026":null,"GO:0000032":null,"GO:0000139":null,"GO:0006487":null,"GO:0035269":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":29,"start":7}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01264.1"],"transcripts_by_uniquename":{"SJAG_01264.1":null},"uniprot_identifier":"B6K073","uniquename":"SJAG_01264"}


id: SJAG_01266
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[108419],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[108420],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[75555],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01266","EnsemblGenomes-Tr:EEB06224","UniProtKB/TrEMBL:B6K074","InterPro:IPR008584"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sen34","uniquename":"SJAG_01260"},{"name":"ppm2","uniquename":"SJAG_01261"},{"name":"uve1","uniquename":"SJAG_01262"},{"name":"bqt4","uniquename":"SJAG_01263"},{"name":"omh1","uniquename":"SJAG_01264"},{"name":"ess1","uniquename":"SJAG_01266"},{"name":"orc6","uniquename":"SJAG_01267"},{"name":"arp3","uniquename":"SJAG_01268"},{"name":"trm7","uniquename":"SJAG_01269"},{"name":"ypa1","uniquename":"SJAG_01270"},{"name":"lip2","uniquename":"SJAG_01271"}],"genes_by_uniquename":{"HGNC:26059":null,"SJAG_01266":null,"SPBC2D10.03c":null,"YCR090C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"CXXC motif containing zinc binding protein, eukaryotic","id":"PF05907","interpro_description":"CXXC motif containing zinc binding protein, eukaryotic","interpro_id":"IPR008584","interpro_name":"CXXC_Zn-binding_euk","locations":[{"end":155,"start":6}],"match_end":155,"match_start":6,"name":"CXXC_Zn-b_euk"},{"dbname":"SUPERFAMILY","id":"SSF141678","locations":[{"end":154,"start":1}],"match_end":154,"match_start":1,"name":"MAL13P1.257-like"},{"dbname":"PANTHER","id":"PTHR12857","interpro_description":"CXXC motif containing zinc binding protein, eukaryotic","interpro_id":"IPR008584","interpro_name":"CXXC_Zn-binding_euk","locations":[{"end":156,"start":1}],"match_end":156,"match_start":1,"name":"CXXC MOTIF CONTAINING ZINC BINDING PROTEIN"}],"location":{"chromosome_name":"supercont5.3","end_pos":1284081,"start_pos":1283608,"strand":"forward"},"name":"ess1","ortholog_annotations":[{"gene_uniquename":"SJAG_01266","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26059","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01266","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC2D10.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01266","ortholog_taxonid":4932,"ortholog_uniquename":"YCR090C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01266","ortholog_taxonid":4932,"ortholog_uniquename":"YCR090C","reference_uniquename":"PMID:26896847"}],"product":"DUF866 family protein, human C1orf123 ortholog","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"]}},"subset_termids":["GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0008270":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01266.1"],"transcripts_by_uniquename":{"SJAG_01266.1":null},"uniprot_identifier":"B6K074","uniquename":"SJAG_01266"}


id: SJAG_01267
data:
  {"cv_annotations":{"biological_process":[{"annotations":[108417],"is_not":false,"summary":null,"term":"GO:0006270"}],"cellular_component":[{"annotations":[108409],"is_not":false,"summary":null,"term":"GO:0000785"},{"annotations":[108410],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[108411],"is_not":false,"summary":null,"term":"GO:0031261"},{"annotations":[61461],"is_not":false,"summary":null,"term":"GO:0005664"},{"annotations":[108414],"is_not":false,"summary":null,"term":"GO:0005656"},{"annotations":[108415],"is_not":false,"summary":null,"term":"GO:0043596"}],"molecular_function":[{"annotations":[108418],"is_not":false,"summary":null,"term":"GO:0003688"}],"mondo":[{"annotations":[87230],"is_not":false,"summary":null,"term":"MONDO:0013430"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06225","InterPro:IPR008721","EnsemblGenomes-Gn:SJAG_01267","GOA:B6K075","UniProtKB/TrEMBL:B6K075"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ppm2","uniquename":"SJAG_01261"},{"name":"uve1","uniquename":"SJAG_01262"},{"name":"bqt4","uniquename":"SJAG_01263"},{"name":"omh1","uniquename":"SJAG_01264"},{"name":"ess1","uniquename":"SJAG_01266"},{"name":"orc6","uniquename":"SJAG_01267"},{"name":"arp3","uniquename":"SJAG_01268"},{"name":"trm7","uniquename":"SJAG_01269"},{"name":"ypa1","uniquename":"SJAG_01270"},{"name":"lip2","uniquename":"SJAG_01271"},{"name":"bud22","uniquename":"SJAG_01272"}],"genes_by_uniquename":{"HGNC:17151":null,"SJAG_01267":null,"SPBC2A9.12":null,"YHR118C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Origin recognition complex subunit 6 (ORC6)","id":"PF05460","interpro_description":"ORC6, first cyclin-like domain","interpro_id":"IPR008721","interpro_name":"ORC6_cyclin_first","locations":[{"end":94,"start":10}],"match_end":94,"match_start":10,"name":"ORC6"}],"location":{"chromosome_name":"supercont5.3","end_pos":1285005,"start_pos":1284184,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":13,"start":3}}],"name":"orc6","ortholog_annotations":[{"gene_uniquename":"SJAG_01267","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17151","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01267","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC2A9.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01267","ortholog_taxonid":4932,"ortholog_uniquename":"YHR118C","reference_uniquename":"PMID:29761456"}],"product":"origin recognition complex subunit Orc6","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0003688"]}},"subset_termids":["GO:0006260","MONDO:0006025","GO:0005829","GO:0005694","GO:0005634","GO:0005654"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000785":null,"GO:0003688":null,"GO:0005656":null,"GO:0005664":null,"GO:0005829":null,"GO:0006270":null,"GO:0031261":null,"GO:0043596":null,"MONDO:0013430":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01267.1"],"transcripts_by_uniquename":{"SJAG_01267.1":null},"uniprot_identifier":"B6K075","uniquename":"SJAG_01267"}


id: SJAG_01268
data:
  {"cv_annotations":{"biological_process":[{"annotations":[99167],"is_not":false,"summary":null,"term":"GO:0044396"},{"annotations":[99168],"is_not":false,"summary":null,"term":"GO:0090135"},{"annotations":[99169],"is_not":false,"summary":null,"term":"GO:0030041"},{"annotations":[75116],"is_not":false,"summary":null,"term":"GO:0034314"},{"annotations":[99171],"is_not":false,"summary":null,"term":"GO:0006897"}],"cellular_component":[{"annotations":[75117],"is_not":false,"summary":null,"term":"GO:0030479"},{"annotations":[75118],"is_not":false,"summary":null,"term":"GO:0005885"},{"annotations":[99163],"is_not":false,"summary":null,"term":"GO:0051285"},{"annotations":[99164],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[99166],"is_not":false,"summary":null,"term":"GO:0005829"}],"molecular_function":[{"annotations":[75119],"is_not":false,"summary":null,"term":"GO:0051015"},{"annotations":[99172],"is_not":false,"summary":null,"term":"GO:0005524"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01268","InterPro:IPR020902","UniProtKB/TrEMBL:B6K076","EnsemblGenomes-Tr:EEB06226","InterPro:IPR004000","GOA:B6K076"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":80,"start":53}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"uve1","uniquename":"SJAG_01262"},{"name":"bqt4","uniquename":"SJAG_01263"},{"name":"omh1","uniquename":"SJAG_01264"},{"name":"ess1","uniquename":"SJAG_01266"},{"name":"orc6","uniquename":"SJAG_01267"},{"name":"arp3","uniquename":"SJAG_01268"},{"name":"trm7","uniquename":"SJAG_01269"},{"name":"ypa1","uniquename":"SJAG_01270"},{"name":"lip2","uniquename":"SJAG_01271"},{"name":"bud22","uniquename":"SJAG_01272"},{"uniquename":"SJAG_01273"}],"genes_by_uniquename":{"HGNC:170":null,"HGNC:17256":null,"HGNC:37282":null,"SJAG_01268":null,"SPAC630.03":null,"YJR065C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Actin","id":"PF00022","interpro_description":"Actin family","interpro_id":"IPR004000","interpro_name":"Actin","locations":[{"end":243,"start":33},{"end":434,"start":251}],"match_end":434,"match_start":33,"name":"Actin"},{"dbname":"CDD","description":"ASKHA_NBD_Arp3-like","id":"cd10221","locations":[{"end":434,"start":34}],"match_end":434,"match_start":34,"name":"ASKHA_NBD_Arp3-like"},{"dbname":"PROSITE_PATTERNS","description":"Actins and actin-related proteins signature.","id":"PS01132","interpro_description":"Actin/actin-like conserved site","interpro_id":"IPR020902","interpro_name":"Actin/actin-like_CS","locations":[{"end":154,"start":142}],"match_end":154,"match_start":142,"name":"ACTINS_ACT_LIKE"},{"dbname":"SMART","id":"SM00268","interpro_description":"Actin family","interpro_id":"IPR004000","interpro_name":"Actin","locations":[{"end":437,"start":31}],"match_end":437,"match_start":31,"name":"actin_3"},{"dbname":"FUNFAM","description":"Actin-related protein 3","id":"G3DSA:3.30.420.40:FF:000029","locations":[{"end":192,"start":24}],"match_end":192,"match_start":24},{"dbname":"FUNFAM","description":"Putative actin-related protein 5","id":"G3DSA:3.30.420.40:FF:000058","locations":[{"end":429,"start":401}],"match_end":429,"match_start":401},{"dbname":"FUNFAM","description":"Actin-related protein 3 (ARP3)","id":"G3DSA:3.90.640.10:FF:000006","locations":[{"end":319,"start":226}],"match_end":319,"match_start":226},{"dbname":"SUPERFAMILY","id":"SSF53067","interpro_description":"ATPase, nucleotide binding domain","interpro_id":"IPR043129","interpro_name":"ATPase_NBD","locations":[{"end":182,"start":34},{"end":434,"start":194}],"match_end":434,"match_start":34,"name":"Actin-like ATPase domain"},{"dbname":"GENE3D","id":"G3DSA:3.90.640.10","locations":[{"end":319,"start":226}],"match_end":319,"match_start":226,"name":"Actin; Chain A, domain 4"},{"dbname":"GENE3D","id":"G3DSA:3.30.420.40","locations":[{"end":48,"start":34},{"end":225,"start":73},{"end":428,"start":320}],"match_end":428,"match_start":34},{"dbname":"PANTHER","id":"PTHR11937","interpro_description":"Actin family","interpro_id":"IPR004000","interpro_name":"Actin","locations":[{"end":431,"start":33}],"match_end":431,"match_start":33,"name":"ACTIN"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":80,"start":53}],"match_end":80,"match_start":53,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1287041,"start_pos":1285436,"strand":"forward"},"name":"arp3","ortholog_annotations":[{"gene_uniquename":"SJAG_01268","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:170","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01268","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17256","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01268","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:37282","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01268","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC630.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01268","ortholog_taxonid":4932,"ortholog_uniquename":"YJR065C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01268","ortholog_taxonid":4932,"ortholog_uniquename":"YJR065C","reference_uniquename":"PMID:26896847"}],"product":"ARP2/3 actin-organizing complex actin-related protein subunit Arp3","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0051015","GO:0005524"]}},"subset_termids":["GO:0005829","GO:0030479","GO:0016192","GO:0005938","GO:0065003","GO:0030036","GO:0015629","GO:0003779"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005524":null,"GO:0005829":null,"GO:0005885":null,"GO:0006897":null,"GO:0030041":null,"GO:0030479":null,"GO:0032153":null,"GO:0034314":null,"GO:0044396":null,"GO:0051015":null,"GO:0051285":null,"GO:0090135":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01268.1"],"transcripts_by_uniquename":{"SJAG_01268.1":null},"uniprot_identifier":"B6K076","uniquename":"SJAG_01268"}


id: SJAG_01269
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":160,"start":160}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"S-adenosyl-L-methionine","range":{"end":53,"start":53}},{"assigned_by":"UniProtKB","ligand":"S-adenosyl-L-methionine","range":{"end":55,"start":55}},{"assigned_by":"UniProtKB","ligand":"S-adenosyl-L-methionine","range":{"end":79,"start":79}},{"assigned_by":"UniProtKB","ligand":"S-adenosyl-L-methionine","range":{"end":95,"start":95}},{"assigned_by":"UniProtKB","ligand":"S-adenosyl-L-methionine","range":{"end":120,"start":120}}],"cv_annotations":{"biological_process":[{"annotations":[77548],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[98180],"is_not":false,"summary":null,"term":"GO:0002130"}],"cellular_component":[{"annotations":[98176],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[98177],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[98181],"is_not":false,"summary":null,"term":"GO:1904047"},{"annotations":[66112],"is_not":false,"summary":null,"term":"GO:0106340"},{"annotations":[98183],"is_not":false,"summary":null,"term":"GO:0106050"}],"mondo":[{"annotations":[85381],"is_not":false,"summary":null,"term":"MONDO:0010660"}]},"dbxrefs":["GOA:B6K077","EnsemblGenomes-Tr:EEB06227","InterPro:IPR002877","EnsemblGenomes-Gn:SJAG_01269","InterPro:IPR015507","UniProtKB/TrEMBL:B6K077","InterPro:IPR029063","InterPro:IPR028590"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bqt4","uniquename":"SJAG_01263"},{"name":"omh1","uniquename":"SJAG_01264"},{"name":"ess1","uniquename":"SJAG_01266"},{"name":"orc6","uniquename":"SJAG_01267"},{"name":"arp3","uniquename":"SJAG_01268"},{"name":"trm7","uniquename":"SJAG_01269"},{"name":"ypa1","uniquename":"SJAG_01270"},{"name":"lip2","uniquename":"SJAG_01271"},{"name":"bud22","uniquename":"SJAG_01272"},{"uniquename":"SJAG_01273"},{"name":"atg13","uniquename":"SJAG_01274"}],"genes_by_uniquename":{"HGNC:13254":null,"SJAG_01269":null,"SPAC4F10.03c":null,"YBR061C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"FtsJ-like methyltransferase","id":"PF01728","interpro_description":"Ribosomal RNA methyltransferase, FtsJ domain","interpro_id":"IPR002877","interpro_name":"RNA_MeTrfase_FtsJ_dom","locations":[{"end":203,"start":21}],"match_end":203,"match_start":21,"name":"FtsJ"},{"dbname":"FUNFAM","description":"tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase","id":"G3DSA:3.40.50.150:FF:000176","locations":[{"end":209,"start":20}],"match_end":209,"match_start":20},{"dbname":"SUPERFAMILY","id":"SSF53335","interpro_description":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_id":"IPR029063","interpro_name":"SAM-dependent_MTases_sf","locations":[{"end":204,"start":20}],"match_end":204,"match_start":20,"name":"S-adenosyl-L-methionine-dependent methyltransferases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.150","interpro_description":"S-adenosyl-L-methionine-dependent methyltransferase superfamily","interpro_id":"IPR029063","interpro_name":"SAM-dependent_MTases_sf","locations":[{"end":208,"start":20}],"match_end":208,"match_start":20,"name":"Vaccinia Virus protein VP39"},{"dbname":"PANTHER","id":"PTHR10920","interpro_description":"Ribosomal RNA large subunit methyltransferase RlmE","interpro_id":"IPR050082","interpro_name":"RNA_methyltr_RlmE","locations":[{"end":206,"start":4}],"match_end":206,"match_start":4,"name":"RIBOSOMAL RNA METHYLTRANSFERASE"},{"dbname":"HAMAP","description":"Ribosomal RNA large subunit methyltransferase E [rlmE].","id":"MF_01547","interpro_description":"Ribosomal RNA large subunit methyltransferase E","interpro_id":"IPR015507","interpro_name":"rRNA-MeTfrase_E","locations":[{"end":204,"start":5}],"match_end":204,"match_start":5,"name":"RNA_methyltr_E"},{"dbname":"HAMAP","description":"Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [TRM7].","id":"MF_03162","interpro_description":"tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase TRM7","interpro_id":"IPR028590","interpro_name":"RNA_methyltr_E_TRM7","locations":[{"end":246,"start":1}],"match_end":246,"match_start":1,"name":"RNA_methyltr_E_TRM7"}],"location":{"chromosome_name":"supercont5.3","end_pos":1288337,"start_pos":1287221,"strand":"reverse"},"name":"trm7","ortholog_annotations":[{"gene_uniquename":"SJAG_01269","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13254","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01269","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F10.03c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01269","ortholog_taxonid":4932,"ortholog_uniquename":"YBR061C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01269","ortholog_taxonid":4932,"ortholog_uniquename":"YBR061C","reference_uniquename":"PMID:26896847"}],"product":"tRNA 2'-O-ribose methyltransferase Trm7","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:1904047"],"not-binding":["GO:0106050","GO:0106340"]}},"subset_termids":["GO:0140101","GO:0016741","GO:0005634","GO:0140098","GO:0005829","GO:0002181","GO:0006399"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002130":null,"GO:0002181":null,"GO:0005634":null,"GO:0005829":null,"GO:0106050":null,"GO:0106340":null,"GO:1904047":null,"MONDO:0010660":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01269.1"],"transcripts_by_uniquename":{"SJAG_01269.1":null},"uniprot_identifier":"B6K077","uniquename":"SJAG_01269"}


id: SJAG_01270
data:
  {"cv_annotations":{"biological_process":[{"annotations":[76121],"is_not":false,"summary":null,"term":"GO:0007052"},{"annotations":[98189],"is_not":false,"summary":null,"term":"GO:0023052"}],"cellular_component":[{"annotations":[98185],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[76118],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[76122],"is_not":false,"summary":null,"term":"GO:0000159"}],"molecular_function":[{"annotations":[76120],"is_not":false,"summary":null,"term":"GO:0003755"},{"annotations":[76117],"is_not":false,"summary":null,"term":"GO:0008160"}],"mondo":[{"annotations":[86715],"is_not":false,"summary":null,"term":"MONDO:0957576"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06228","InterPro:IPR037218","EnsemblGenomes-Gn:SJAG_01270","GOA:B6K078","UniProtKB/TrEMBL:B6K078","InterPro:IPR004327"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"omh1","uniquename":"SJAG_01264"},{"name":"ess1","uniquename":"SJAG_01266"},{"name":"orc6","uniquename":"SJAG_01267"},{"name":"arp3","uniquename":"SJAG_01268"},{"name":"trm7","uniquename":"SJAG_01269"},{"name":"ypa1","uniquename":"SJAG_01270"},{"name":"lip2","uniquename":"SJAG_01271"},{"name":"bud22","uniquename":"SJAG_01272"},{"uniquename":"SJAG_01273"},{"name":"atg13","uniquename":"SJAG_01274"},{"name":"noc1","uniquename":"SJAG_01275"}],"genes_by_uniquename":{"HGNC:9308":null,"SJAG_01270":null,"SPAC4F10.04":null,"YIL153W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Phosphotyrosyl phosphate activator (PTPA) protein","id":"PF03095","interpro_description":"Phosphotyrosyl phosphatase activator, PTPA","interpro_id":"IPR004327","interpro_name":"Phstyr_phstse_ac","locations":[{"end":320,"start":30}],"match_end":320,"match_start":30,"name":"PTPA"},{"dbname":"CDD","description":"PTPA","id":"cd04087","interpro_description":"Phosphotyrosyl phosphatase activator, PTPA","interpro_id":"IPR004327","interpro_name":"Phstyr_phstse_ac","locations":[{"end":315,"start":52}],"match_end":315,"match_start":52,"name":"PTPA"},{"dbname":"FUNFAM","description":"Serine/threonine-protein phosphatase 2A activator","id":"G3DSA:1.20.120.1150:FF:000002","locations":[{"end":328,"start":215}],"match_end":328,"match_start":215},{"dbname":"SUPERFAMILY","id":"SSF140984","interpro_description":"PTPA superfamily","interpro_id":"IPR037218","interpro_name":"PTPA_sf","locations":[{"end":321,"start":22}],"match_end":321,"match_start":22,"name":"PTPA-like"},{"dbname":"GENE3D","id":"G3DSA:1.20.120.1150","interpro_description":"Phosphotyrosyl phosphatase activator, C-terminal lid domain","interpro_id":"IPR043170","interpro_name":"PTPA_C_lid","locations":[{"end":327,"start":215}],"match_end":327,"match_start":215},{"dbname":"PANTHER","id":"PTHR10012","interpro_description":"Phosphotyrosyl phosphatase activator, PTPA","interpro_id":"IPR004327","interpro_name":"Phstyr_phstse_ac","locations":[{"end":323,"start":12}],"match_end":323,"match_start":12,"name":"SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B"},{"dbname":"PIRSF","id":"PIRSF016325","interpro_description":"Phosphotyrosyl phosphatase activator, PTPA","interpro_id":"IPR004327","interpro_name":"Phstyr_phstse_ac","locations":[{"end":333,"start":18}],"match_end":333,"match_start":18,"name":"PTPA"}],"location":{"chromosome_name":"supercont5.3","end_pos":1289546,"start_pos":1288487,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":13,"start":1}}],"name":"ypa1","ortholog_annotations":[{"gene_uniquename":"SJAG_01270","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9308","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01270","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F10.04","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01270","ortholog_taxonid":4932,"ortholog_uniquename":"YIL153W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01270","ortholog_taxonid":4932,"ortholog_uniquename":"YIL153W","reference_uniquename":"PMID:26896847"}],"product":"serine/threonine protein phosphatase PP2A regulatory subunit, PTPA family Ypa1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008160","GO:0003755"]}},"subset_termids":["GO:0030234","GO:0005829","GO:0098772","GO:0005634","GO:0023052","GO:0016853","GO:0140096","GO:0000226"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000159":null,"GO:0003755":null,"GO:0005634":null,"GO:0005829":null,"GO:0007052":null,"GO:0008160":null,"GO:0023052":null,"MONDO:0957576":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01270.1"],"transcripts_by_uniquename":{"SJAG_01270.1":null},"uniprot_identifier":"B6K078","uniquename":"SJAG_01270"}


id: SJAG_01271
data:
  {"active_sites":[{"assigned_by":"UniProtKB","range":{"end":209,"start":209}}],"binding_sites":[{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":117,"start":110}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":180,"start":178}},{"assigned_by":"UniProtKB","ligand":"substrate","range":{"end":193,"start":191}}],"cv_annotations":{"biological_process":[{"annotations":[98194],"is_not":false,"summary":null,"term":"GO:0009107"}],"cellular_component":[{"annotations":[71075],"is_not":false,"summary":null,"term":"GO:0005739"}],"molecular_function":[{"annotations":[71074],"is_not":false,"summary":null,"term":"GO:0033819"}],"mondo":[{"annotations":[85586],"is_not":false,"summary":null,"term":"MONDO:0060562"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01271","GOA:B6K079","InterPro:IPR000544","EnsemblGenomes-Tr:EEB06229","InterPro:IPR004143","InterPro:IPR020605","UniProtKB/TrEMBL:B6K079"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ess1","uniquename":"SJAG_01266"},{"name":"orc6","uniquename":"SJAG_01267"},{"name":"arp3","uniquename":"SJAG_01268"},{"name":"trm7","uniquename":"SJAG_01269"},{"name":"ypa1","uniquename":"SJAG_01270"},{"name":"lip2","uniquename":"SJAG_01271"},{"name":"bud22","uniquename":"SJAG_01272"},{"uniquename":"SJAG_01273"},{"name":"atg13","uniquename":"SJAG_01274"},{"name":"noc1","uniquename":"SJAG_01275"},{"name":"mnn9","uniquename":"SJAG_01276"}],"genes_by_uniquename":{"HGNC:37216":null,"SJAG_01271":null,"SPAC4F10.05c":null,"YLR239C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Lipoyl protein ligase A/B catalytic domain","id":"PF21948","interpro_description":"Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain","interpro_id":"IPR004143","interpro_name":"BPL_LPL_catalytic","locations":[{"end":238,"start":69}],"match_end":238,"match_start":69,"name":"LplA-B_cat"},{"dbname":"CDD","description":"LipB","id":"cd16444","interpro_description":"Octanoyltransferase","interpro_id":"IPR000544","interpro_name":"Octanoyltransferase","locations":[{"end":239,"start":42}],"match_end":239,"match_start":42,"name":"LipB"},{"dbname":"PROSITE_PATTERNS","description":"Lipoate-protein ligase B signature.","id":"PS01313","interpro_description":"Octanoyltransferase, conserved site","interpro_id":"IPR020605","interpro_name":"Octanoyltransferase_CS","locations":[{"end":125,"start":110}],"match_end":125,"match_start":110,"name":"LIPB"},{"dbname":"PROSITE_PROFILES","description":"Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile.","id":"PS51733","interpro_description":"Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain","interpro_id":"IPR004143","interpro_name":"BPL_LPL_catalytic","locations":[{"end":246,"start":68}],"match_end":246,"match_start":68,"name":"BPL_LPL_CATALYTIC"},{"dbname":"SUPERFAMILY","id":"SSF55681","interpro_description":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_id":"IPR045864","interpro_name":"aa-tRNA-synth_II/BPL/LPL","locations":[{"end":242,"start":40}],"match_end":242,"match_start":40,"name":"Class II aaRS and biotin synthetases"},{"dbname":"GENE3D","id":"G3DSA:3.30.930.10","interpro_description":"Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)","interpro_id":"IPR045864","interpro_name":"aa-tRNA-synth_II/BPL/LPL","locations":[{"end":243,"start":30}],"match_end":243,"match_start":30,"name":"Bira Bifunctional Protein; Domain 2"},{"dbname":"PANTHER","id":"PTHR10993","locations":[{"end":241,"start":31}],"match_end":241,"match_start":31,"name":"OCTANOYLTRANSFERASE"},{"dbname":"PIRSF","id":"PIRSF016262","interpro_description":"Octanoyltransferase","interpro_id":"IPR000544","interpro_name":"Octanoyltransferase","locations":[{"end":246,"start":25}],"match_end":246,"match_start":25,"name":"LPLase"},{"dbname":"HAMAP","description":"Octanoyltransferase [lipB].","id":"MF_00013","interpro_description":"Octanoyltransferase","interpro_id":"IPR000544","interpro_name":"Octanoyltransferase","locations":[{"end":246,"start":32}],"match_end":246,"match_start":32,"name":"LipB"},{"dbname":"NCBIFAM","description":"lipoyl(octanoyl) transferase LipB","id":"TIGR00214","interpro_description":"Octanoyltransferase","interpro_id":"IPR000544","interpro_name":"Octanoyltransferase","locations":[{"end":241,"start":75}],"match_end":241,"match_start":75,"name":"lipB"}],"location":{"chromosome_name":"supercont5.3","end_pos":1290294,"start_pos":1289554,"strand":"reverse"},"name":"lip2","ortholog_annotations":[{"gene_uniquename":"SJAG_01271","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:37216","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01271","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F10.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01271","ortholog_taxonid":4932,"ortholog_uniquename":"YLR239C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01271","ortholog_taxonid":4932,"ortholog_uniquename":"YLR239C","reference_uniquename":"PMID:26896847"}],"product":"mitochondrial lipoate-protein ligase Lip2","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0033819"]}},"subset_termids":["GO:0006629","MONDO:0700092","GO:0006790","GO:0016746","GO:0005739","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005739":null,"GO:0009107":null,"GO:0033819":null,"MONDO:0060562":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01271.1"],"transcripts_by_uniquename":{"SJAG_01271.1":null},"uniprot_identifier":"B6K079","uniquename":"SJAG_01271"}


id: SJAG_01272
data:
  {"coiled_coil_coords":[{"range":{"end":85,"start":65}},{"range":{"end":186,"start":166}},{"range":{"end":347,"start":327}}],"cv_annotations":{"biological_process":[{"annotations":[74135],"is_not":false,"summary":null,"term":"GO:0030490"}],"cellular_component":[{"annotations":[74134],"is_not":false,"summary":null,"term":"GO:0030686"},{"annotations":[98197],"is_not":false,"summary":null,"term":"GO:0005730"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06230","InterPro:IPR037393","EnsemblGenomes-Gn:SJAG_01272","InterPro:IPR015158","UniProtKB/TrEMBL:B6K080"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":24,"start":1}},{"range":{"end":217,"start":177}},{"range":{"end":287,"start":232}},{"range":{"end":311,"start":292}},{"range":{"end":398,"start":325}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"orc6","uniquename":"SJAG_01267"},{"name":"arp3","uniquename":"SJAG_01268"},{"name":"trm7","uniquename":"SJAG_01269"},{"name":"ypa1","uniquename":"SJAG_01270"},{"name":"lip2","uniquename":"SJAG_01271"},{"name":"bud22","uniquename":"SJAG_01272"},{"uniquename":"SJAG_01273"},{"name":"atg13","uniquename":"SJAG_01274"},{"name":"noc1","uniquename":"SJAG_01275"},{"name":"mnn9","uniquename":"SJAG_01276"},{"name":"spn1","uniquename":"SJAG_01277"}],"genes_by_uniquename":{"HGNC:26333":null,"SJAG_01272":null,"SPAC4F10.06":null,"YMR014W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"BUD22","id":"PF09073","interpro_description":"Bud22 domain","interpro_id":"IPR015158","interpro_name":"Bud22_dom","locations":[{"end":398,"start":35}],"match_end":398,"match_start":35,"name":"BUD22"},{"dbname":"PANTHER","id":"PTHR23325","interpro_description":"Bud22/Serum response factor-binding protein 1","interpro_id":"IPR037393","interpro_name":"Bud22/SRFB1","locations":[{"end":398,"start":1}],"match_end":398,"match_start":1,"name":"SERUM RESPONSE FACTOR-BINDING"},{"dbname":"COILS","id":"Coil","locations":[{"end":85,"start":65},{"end":186,"start":166},{"end":347,"start":327}],"match_end":347,"match_start":65,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":24,"start":1},{"end":217,"start":177},{"end":287,"start":232},{"end":311,"start":292},{"end":398,"start":325}],"match_end":398,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":255,"start":245}],"match_end":255,"match_start":245,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":208,"start":194}],"match_end":208,"match_start":194,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":191,"start":177},{"end":379,"start":327}],"match_end":379,"match_start":177,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":14,"start":1},{"end":311,"start":299}],"match_end":311,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1291831,"start_pos":1290635,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":70,"start":59}},{"range":{"end":85,"start":74}},{"range":{"end":311,"start":299}},{"range":{"end":346,"start":326}}],"name":"bud22","ortholog_annotations":[{"gene_uniquename":"SJAG_01272","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:26333","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01272","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F10.06","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01272","ortholog_taxonid":4932,"ortholog_uniquename":"YMR014W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01272","ortholog_taxonid":4932,"ortholog_uniquename":"YMR014W","reference_uniquename":"PMID:26896847"}],"product":"ribosome small subunit biogenesis protein, BUD22 family","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005634","GO:0005730","GO:0042254","GO:0030684"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005730":null,"GO:0030490":null,"GO:0030686":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01272.1"],"transcripts_by_uniquename":{"SJAG_01272.1":null},"uniprot_identifier":"B6K080","uniquename":"SJAG_01272"}


id: SJAG_01273
data:
  {"coiled_coil_coords":[{"range":{"end":212,"start":185}},{"range":{"end":279,"start":259}},{"range":{"end":322,"start":298}}],"cv_annotations":{},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01273","EnsemblGenomes-Tr:EEB06231","UniProtKB/TrEMBL:B6K081"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":121,"start":86}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"arp3","uniquename":"SJAG_01268"},{"name":"trm7","uniquename":"SJAG_01269"},{"name":"ypa1","uniquename":"SJAG_01270"},{"name":"lip2","uniquename":"SJAG_01271"},{"name":"bud22","uniquename":"SJAG_01272"},{"uniquename":"SJAG_01273"},{"name":"atg13","uniquename":"SJAG_01274"},{"name":"noc1","uniquename":"SJAG_01275"},{"name":"mnn9","uniquename":"SJAG_01276"},{"name":"spn1","uniquename":"SJAG_01277"},{"name":"fta1","uniquename":"SJAG_01278"}],"genes_by_uniquename":{"SJAG_01273":null},"has_protein_features":true,"interpro_matches":[{"dbname":"COILS","id":"Coil","locations":[{"end":212,"start":185},{"end":279,"start":259},{"end":322,"start":298}],"match_end":322,"match_start":185,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":121,"start":86}],"match_end":121,"match_start":86,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":110,"start":99}],"match_end":110,"match_start":99,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":98,"start":87}],"match_end":98,"match_start":87,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1293239,"start_pos":1291892,"strand":"reverse"},"product":"Schizosaccharomyces japonicus specific protein","split_by_parent_groups":{},"taxonid":4897,"taxonomic_distribution":"other","transcript_so_termid":"SO:0000234","transcripts":["SJAG_01273.1"],"transcripts_by_uniquename":{"SJAG_01273.1":null},"uniprot_identifier":"B6K081","uniquename":"SJAG_01273"}


id: SJAG_01274
data:
  {"cv_annotations":{"biological_process":[{"annotations":[60302],"is_not":false,"summary":null,"term":"GO:0000045"},{"annotations":[72937],"is_not":false,"summary":null,"term":"GO:0000423"},{"annotations":[72936],"is_not":false,"summary":null,"term":"GO:0034727"}],"cellular_component":[{"annotations":[72938],"is_not":false,"summary":null,"term":"GO:1990316"},{"annotations":[72934],"is_not":false,"summary":null,"term":"GO:0005776"},{"annotations":[72935],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[72933],"is_not":false,"summary":null,"term":"GO:0000407"}],"molecular_function":[{"annotations":[72939],"is_not":false,"summary":null,"term":"GO:0019887"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01274","InterPro:IPR018731","InterPro:IPR036570","UniProtKB/TrEMBL:B6K082","EnsemblGenomes-Tr:EEB06232","InterPro:IPR040182","GOA:B6K082"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":310,"start":289}},{"range":{"end":457,"start":411}},{"range":{"end":547,"start":522}},{"range":{"end":620,"start":594}},{"range":{"end":726,"start":672}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"trm7","uniquename":"SJAG_01269"},{"name":"ypa1","uniquename":"SJAG_01270"},{"name":"lip2","uniquename":"SJAG_01271"},{"name":"bud22","uniquename":"SJAG_01272"},{"uniquename":"SJAG_01273"},{"name":"atg13","uniquename":"SJAG_01274"},{"name":"noc1","uniquename":"SJAG_01275"},{"name":"mnn9","uniquename":"SJAG_01276"},{"name":"spn1","uniquename":"SJAG_01277"},{"name":"fta1","uniquename":"SJAG_01278"},{"name":"mpd2","uniquename":"SJAG_01279"}],"genes_by_uniquename":{"HGNC:29091":null,"SJAG_01274":null,"SPAC4F10.07c":null,"YPR185W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Autophagy-related protein 13","id":"PF10033","interpro_description":"Autophagy-related protein 13, N-terminal","interpro_id":"IPR018731","interpro_name":"Atg13_N","locations":[{"end":267,"start":46}],"match_end":267,"match_start":46,"name":"ATG13"},{"dbname":"GENE3D","id":"G3DSA:3.30.900.10","interpro_description":"HORMA domain superfamily","interpro_id":"IPR036570","interpro_name":"HORMA_dom_sf","locations":[{"end":271,"start":32}],"match_end":271,"match_start":32,"name":"HORMA domain"},{"dbname":"PANTHER","id":"PTHR13430","interpro_description":"Autophagy-related protein 13","interpro_id":"IPR040182","interpro_name":"ATG13","locations":[{"end":751,"start":32}],"match_end":751,"match_start":32},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":310,"start":289},{"end":457,"start":411},{"end":547,"start":522},{"end":620,"start":594},{"end":726,"start":672}],"match_end":726,"match_start":289,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":699,"start":690}],"match_end":699,"match_start":690,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":429,"start":411},{"end":620,"start":611}],"match_end":620,"match_start":411,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":718,"start":709}],"match_end":718,"match_start":709,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1295794,"start_pos":1293449,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":306,"start":294}},{"range":{"end":453,"start":443}},{"range":{"end":598,"start":587}},{"range":{"end":663,"start":653}},{"range":{"end":698,"start":687}}],"name":"atg13","ortholog_annotations":[{"gene_uniquename":"SJAG_01274","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:29091","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01274","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F10.07c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01274","ortholog_taxonid":4932,"ortholog_uniquename":"YPR185W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01274","ortholog_taxonid":4932,"ortholog_uniquename":"YPR185W","reference_uniquename":"PMID:26896847"}],"product":"autophagy associated protein Atg13","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0019887"]}},"subset_termids":["GO:0098772","GO:0005773","GO:0030234","GO:0005829","GO:0006914","GO:0000407"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000045":null,"GO:0000407":null,"GO:0000423":null,"GO:0005776":null,"GO:0005829":null,"GO:0019887":null,"GO:0034727":null,"GO:1990316":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01274.1"],"transcripts_by_uniquename":{"SJAG_01274.1":null},"uniprot_identifier":"B6K082","uniquename":"SJAG_01274"}


id: SJAG_01275
data:
  {"coiled_coil_coords":[{"range":{"end":793,"start":757}}],"cv_annotations":{"biological_process":[{"annotations":[98212],"is_not":false,"summary":null,"term":"GO:0042254"}],"cellular_component":[{"annotations":[98209],"is_not":false,"summary":null,"term":"GO:0030690"},{"annotations":[98210],"is_not":false,"summary":null,"term":"GO:0005730"}]},"dbxrefs":["GOA:B6K083","EnsemblGenomes-Gn:SJAG_01275","InterPro:IPR040155","UniProtKB/TrEMBL:B6K083","InterPro:IPR005612","InterPro:IPR016024","EnsemblGenomes-Tr:EEB06233"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":375,"start":335}},{"range":{"end":588,"start":535}},{"range":{"end":860,"start":766}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"ypa1","uniquename":"SJAG_01270"},{"name":"lip2","uniquename":"SJAG_01271"},{"name":"bud22","uniquename":"SJAG_01272"},{"uniquename":"SJAG_01273"},{"name":"atg13","uniquename":"SJAG_01274"},{"name":"noc1","uniquename":"SJAG_01275"},{"name":"mnn9","uniquename":"SJAG_01276"},{"name":"spn1","uniquename":"SJAG_01277"},{"name":"fta1","uniquename":"SJAG_01278"},{"name":"mpd2","uniquename":"SJAG_01279"},{"name":"bud20","uniquename":"SJAG_01280"}],"genes_by_uniquename":{"HGNC:24218":null,"SJAG_01275":null,"SPAC4F10.09c":null,"YDR060W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"CBF/Mak21 family","id":"PF03914","interpro_description":"CCAAT-binding factor","interpro_id":"IPR005612","interpro_name":"CCAAT-binding_factor","locations":[{"end":616,"start":424}],"match_end":616,"match_start":424,"name":"CBF"},{"dbname":"SUPERFAMILY","id":"SSF48371","interpro_description":"Armadillo-type fold","interpro_id":"IPR016024","interpro_name":"ARM-type_fold","locations":[{"end":160,"start":112},{"end":309,"start":192},{"end":539,"start":404}],"match_end":539,"match_start":112,"name":"ARM repeat"},{"dbname":"PANTHER","id":"PTHR12048","interpro_description":"CEBPZ/Mak21-like","interpro_id":"IPR040155","interpro_name":"CEBPZ/Mak21-like","locations":[{"end":878,"start":14}],"match_end":878,"match_start":14,"name":"CCAAT-BINDING FACTOR-RELATED"},{"dbname":"COILS","id":"Coil","locations":[{"end":793,"start":757}],"match_end":793,"match_start":757,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":375,"start":335},{"end":588,"start":535},{"end":860,"start":766}],"match_end":860,"match_start":335,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":550,"start":535},{"end":793,"start":766},{"end":827,"start":801},{"end":849,"start":839}],"match_end":849,"match_start":535,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":352,"start":343},{"end":375,"start":366},{"end":569,"start":551},{"end":588,"start":576}],"match_end":588,"match_start":343,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":365,"start":354}],"match_end":365,"match_start":354,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1299176,"start_pos":1296534,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":19,"start":9}},{"range":{"end":346,"start":322}},{"range":{"end":364,"start":355}},{"range":{"end":545,"start":530}},{"range":{"end":560,"start":547}},{"range":{"end":575,"start":563}},{"range":{"end":752,"start":744}},{"range":{"end":793,"start":755}},{"range":{"end":828,"start":798}},{"range":{"end":858,"start":852}}],"name":"noc1","ortholog_annotations":[{"gene_uniquename":"SJAG_01275","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:24218","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01275","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F10.09c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01275","ortholog_taxonid":4932,"ortholog_uniquename":"YDR060W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01275","ortholog_taxonid":4932,"ortholog_uniquename":"YDR060W","reference_uniquename":"PMID:26896847"}],"product":"ribosome biogenesis protein Noc1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0030684","GO:0005634","GO:0005730","GO:0042254"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005730":null,"GO:0030690":null,"GO:0042254":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01275.1"],"transcripts_by_uniquename":{"SJAG_01275.1":null},"uniprot_identifier":"B6K083","uniquename":"SJAG_01275"}


id: SJAG_01276
data:
  {"cv_annotations":{"biological_process":[{"annotations":[72446],"is_not":false,"summary":null,"term":"GO:0000032"},{"annotations":[98217],"is_not":false,"summary":null,"term":"GO:0018279"}],"cellular_component":[{"annotations":[98213],"is_not":false,"summary":null,"term":"GO:0005783"},{"annotations":[98215],"is_not":false,"summary":null,"term":"GO:0140497"}],"molecular_function":[{"annotations":[72444],"is_not":false,"summary":null,"term":"GO:0000009"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01276","UniProtKB/TrEMBL:B6K084","InterPro:IPR029044","GOA:B6K084","EnsemblGenomes-Tr:EEB06234"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"lip2","uniquename":"SJAG_01271"},{"name":"bud22","uniquename":"SJAG_01272"},{"uniquename":"SJAG_01273"},{"name":"atg13","uniquename":"SJAG_01274"},{"name":"noc1","uniquename":"SJAG_01275"},{"name":"mnn9","uniquename":"SJAG_01276"},{"name":"spn1","uniquename":"SJAG_01277"},{"name":"fta1","uniquename":"SJAG_01278"},{"name":"mpd2","uniquename":"SJAG_01279"},{"name":"bud20","uniquename":"SJAG_01280"},{"name":"sst2","uniquename":"SJAG_01281"}],"genes_by_uniquename":{"SJAG_01276":null,"SPAC4F10.10c":null,"YPL050C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Anp1","id":"PF03452","locations":[{"end":302,"start":45}],"match_end":302,"match_start":45,"name":"Anp1"},{"dbname":"FUNFAM","description":"Mannan polymerase II complex ANP1 subunit","id":"G3DSA:3.90.550.10:FF:000017","locations":[{"end":336,"start":41}],"match_end":336,"match_start":41},{"dbname":"SUPERFAMILY","id":"SSF53448","interpro_description":"Nucleotide-diphospho-sugar transferases","interpro_id":"IPR029044","interpro_name":"Nucleotide-diphossugar_trans","locations":[{"end":334,"start":149}],"match_end":334,"match_start":149,"name":"Nucleotide-diphospho-sugar transferases"},{"dbname":"GENE3D","id":"G3DSA:3.90.550.10","interpro_description":"Nucleotide-diphospho-sugar transferases","interpro_id":"IPR029044","interpro_name":"Nucleotide-diphossugar_trans","locations":[{"end":336,"start":41}],"match_end":336,"match_start":41,"name":"Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A"},{"dbname":"PANTHER","id":"PTHR43083","interpro_description":"Mannan Polymerase Complex Subunit","interpro_id":"IPR052086","interpro_name":"Mannan_Polymerase_Subunit","locations":[{"end":336,"start":41}],"match_end":336,"match_start":41,"name":"MANNAN POLYMERASE II"}],"location":{"chromosome_name":"supercont5.3","end_pos":1301259,"start_pos":1300249,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":178,"start":167}}],"name":"mnn9","ortholog_annotations":[{"gene_uniquename":"SJAG_01276","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F10.10c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01276","ortholog_taxonid":4932,"ortholog_uniquename":"YPL050C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01276","ortholog_taxonid":4932,"ortholog_uniquename":"YPL050C","reference_uniquename":"PMID:26896847"}],"product":"Golgi mannan polymerase I complex subunit Mnn9","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0000009"]}},"subset_termids":["GO:0071554","GO:0005783","GO:0005794","GO:0006486","GO:0016757"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000009":null,"GO:0000032":null,"GO:0005783":null,"GO:0018279":null,"GO:0140497":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":28,"start":9}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01276.1"],"transcripts_by_uniquename":{"SJAG_01276.1":null},"uniprot_identifier":"B6K084","uniquename":"SJAG_01276"}


id: SJAG_01277
data:
  {"coiled_coil_coords":[{"range":{"end":421,"start":401}},{"range":{"end":443,"start":423}}],"cv_annotations":{"biological_process":[{"annotations":[98228],"is_not":false,"summary":null,"term":"GO:0000281"}],"cellular_component":[{"annotations":[98221],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[98223],"is_not":false,"summary":null,"term":"GO:0036391"},{"annotations":[71261],"is_not":false,"summary":null,"term":"GO:0015630"},{"annotations":[98225],"is_not":false,"summary":null,"term":"GO:0120104"},{"annotations":[98226],"is_not":false,"summary":null,"term":"GO:0032151"},{"annotations":[98227],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[58295],"is_not":false,"summary":null,"term":"GO:0005525"},{"annotations":[71260],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[71263],"is_not":false,"summary":null,"term":"GO:0060090"}]},"dbxrefs":["InterPro:IPR027417","InterPro:IPR016491","UniProtKB/TrEMBL:B6K085","InterPro:IPR030379","GOA:B6K085","EnsemblGenomes-Gn:SJAG_01277","InterPro:IPR025662","EnsemblGenomes-Tr:EEB06235"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":76,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bud22","uniquename":"SJAG_01272"},{"uniquename":"SJAG_01273"},{"name":"atg13","uniquename":"SJAG_01274"},{"name":"noc1","uniquename":"SJAG_01275"},{"name":"mnn9","uniquename":"SJAG_01276"},{"name":"spn1","uniquename":"SJAG_01277"},{"name":"fta1","uniquename":"SJAG_01278"},{"name":"mpd2","uniquename":"SJAG_01279"},{"name":"bud20","uniquename":"SJAG_01280"},{"name":"sst2","uniquename":"SJAG_01281"},{"name":"srp14","uniquename":"SJAG_01282"}],"genes_by_uniquename":{"HGNC:1717":null,"HGNC:2879":null,"HGNC:7729":null,"HGNC:9164":null,"HGNC:9165":null,"SJAG_01277":null,"SPAC4F10.11":null,"YLR314C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Septin","id":"PF00735","interpro_description":"Septin-type guanine nucleotide-binding (G) domain","interpro_id":"IPR030379","interpro_name":"G_SEPTIN_dom","locations":[{"end":387,"start":106}],"match_end":387,"match_start":106,"name":"Septin"},{"dbname":"CDD","description":"CDC_Septin","id":"cd01850","interpro_description":"Septin","interpro_id":"IPR016491","interpro_name":"Septin","locations":[{"end":387,"start":106}],"match_end":387,"match_start":106,"name":"CDC_Septin"},{"dbname":"PROSITE_PATTERNS","description":"Sigma-54 interaction domain ATP-binding region A signature.","id":"PS00675","interpro_description":"Sigma-54 interaction domain, ATP-binding site 1","interpro_id":"IPR025662","interpro_name":"Sigma_54_int_dom_ATP-bd_1","locations":[{"end":125,"start":112}],"match_end":125,"match_start":112,"name":"SIGMA54_INTERACT_1"},{"dbname":"PROSITE_PROFILES","description":"Septin-type guanine nucleotide-binding (G) domain profile.","id":"PS51719","interpro_description":"Septin-type guanine nucleotide-binding (G) domain","interpro_id":"IPR030379","interpro_name":"G_SEPTIN_dom","locations":[{"end":385,"start":106}],"match_end":385,"match_start":106,"name":"G_SEPTIN"},{"dbname":"FUNFAM","description":"septin-7 isoform X1","id":"G3DSA:3.40.50.300:FF:000162","locations":[{"end":386,"start":84}],"match_end":386,"match_start":84},{"dbname":"SUPERFAMILY","id":"SSF52540","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":359,"start":90}],"match_end":359,"match_start":90,"name":"P-loop containing nucleoside triphosphate hydrolases"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.300","interpro_description":"P-loop containing nucleoside triphosphate hydrolase","interpro_id":"IPR027417","interpro_name":"P-loop_NTPase","locations":[{"end":387,"start":84}],"match_end":387,"match_start":84},{"dbname":"PANTHER","id":"PTHR18884","locations":[{"end":467,"start":83}],"match_end":467,"match_start":83,"name":"SEPTIN"},{"dbname":"PIRSF","id":"PIRSF006698","interpro_description":"Septin","interpro_id":"IPR016491","interpro_name":"Septin","locations":[{"end":487,"start":17}],"match_end":487,"match_start":17,"name":"Septin"},{"dbname":"COILS","id":"Coil","locations":[{"end":421,"start":401},{"end":443,"start":423}],"match_end":443,"match_start":401,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":76,"start":1}],"match_end":76,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":65,"start":56}],"match_end":65,"match_start":56,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":53,"start":11}],"match_end":53,"match_start":11,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1303469,"start_pos":1301753,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":65,"start":54}},{"range":{"end":414,"start":401}}],"name":"spn1","ortholog_annotations":[{"gene_uniquename":"SJAG_01277","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:1717","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01277","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2879","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01277","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:7729","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01277","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9164","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01277","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9165","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01277","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F10.11","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01277","ortholog_taxonid":4932,"ortholog_uniquename":"YLR314C","reference_uniquename":"PMID:29761456"}],"product":"mitotic septin Spn1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0005525"],"not-binding":["GO:0003924","GO:0060090"]}},"subset_termids":["GO:0070938","GO:0000281","GO:0005829","GO:0060090","GO:0005938","GO:0015629","GO:0015630","GO:0003924","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000281":null,"GO:0003924":null,"GO:0005525":null,"GO:0005634":null,"GO:0005829":null,"GO:0015630":null,"GO:0032151":null,"GO:0036391":null,"GO:0060090":null,"GO:0120104":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01277.1"],"transcripts_by_uniquename":{"SJAG_01277.1":null},"uniprot_identifier":"B6K085","uniquename":"SJAG_01277"}


id: SJAG_01278
data:
  {"cv_annotations":{"biological_process":[{"annotations":[98235],"is_not":false,"summary":null,"term":"GO:0051315"},{"annotations":[98236],"is_not":false,"summary":null,"term":"GO:0051455"}],"cellular_component":[{"annotations":[98233],"is_not":false,"summary":null,"term":"GO:0031511"},{"annotations":[98234],"is_not":false,"summary":null,"term":"GO:0005634"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01278","EnsemblGenomes-Tr:EEB06236","GOA:B6K086","InterPro:IPR025204","UniProtKB/TrEMBL:B6K086"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01273"},{"name":"atg13","uniquename":"SJAG_01274"},{"name":"noc1","uniquename":"SJAG_01275"},{"name":"mnn9","uniquename":"SJAG_01276"},{"name":"spn1","uniquename":"SJAG_01277"},{"name":"fta1","uniquename":"SJAG_01278"},{"name":"mpd2","uniquename":"SJAG_01279"},{"name":"bud20","uniquename":"SJAG_01280"},{"name":"sst2","uniquename":"SJAG_01281"},{"name":"srp14","uniquename":"SJAG_01282"},{"name":"atg4","uniquename":"SJAG_01283"}],"genes_by_uniquename":{"HGNC:17879":null,"SJAG_01278":null,"SPAC4F10.12":null,"YBR107C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Centromere protein L","id":"PF13092","interpro_description":"Centromere subunit L","interpro_id":"IPR025204","interpro_name":"CENP-L","locations":[{"end":272,"start":9}],"match_end":272,"match_start":9,"name":"CENP-L"},{"dbname":"PANTHER","id":"PTHR31740","interpro_description":"Centromere subunit L","interpro_id":"IPR025204","interpro_name":"CENP-L","locations":[{"end":291,"start":2}],"match_end":291,"match_start":2,"name":"CENTROMERE PROTEIN L"}],"location":{"chromosome_name":"supercont5.3","end_pos":1304709,"start_pos":1303816,"strand":"forward"},"name":"fta1","ortholog_annotations":[{"gene_uniquename":"SJAG_01278","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:17879","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01278","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F10.12","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01278","ortholog_taxonid":4932,"ortholog_uniquename":"YBR107C","reference_uniquename":"PMID:29761456"}],"product":"CENP-L ortholog Fta1","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0000776","GO:0005694","GO:0140013","GO:0005634","GO:0000070"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0031511":null,"GO:0051315":null,"GO:0051455":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01278.1"],"transcripts_by_uniquename":{"SJAG_01278.1":null},"uniprot_identifier":"B6K086","uniquename":"SJAG_01278"}


id: SJAG_01279
data:
  {"coiled_coil_coords":[{"range":{"end":664,"start":640}}],"cv_annotations":{"biological_process":[{"annotations":[98239],"is_not":false,"summary":null,"term":"GO:0006888"}],"cellular_component":[{"annotations":[98238],"is_not":false,"summary":null,"term":"GO:0005829"}],"mondo":[{"annotations":[87647],"is_not":false,"summary":null,"term":"MONDO:0011896"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06237","UniProtKB/TrEMBL:B6K087","InterPro:IPR035445","EnsemblGenomes-Gn:SJAG_01279","InterPro:IPR003169"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":28,"start":1}},{"range":{"end":272,"start":250}},{"range":{"end":522,"start":475}},{"range":{"end":630,"start":562}},{"range":{"end":943,"start":892}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"atg13","uniquename":"SJAG_01274"},{"name":"noc1","uniquename":"SJAG_01275"},{"name":"mnn9","uniquename":"SJAG_01276"},{"name":"spn1","uniquename":"SJAG_01277"},{"name":"fta1","uniquename":"SJAG_01278"},{"name":"mpd2","uniquename":"SJAG_01279"},{"name":"bud20","uniquename":"SJAG_01280"},{"name":"sst2","uniquename":"SJAG_01281"},{"name":"srp14","uniquename":"SJAG_01282"},{"name":"atg4","uniquename":"SJAG_01283"},{"uniquename":"SJAG_01284"}],"genes_by_uniquename":{"HGNC:11960":null,"HGNC:9126":null,"SJAG_01279":null,"SPAC4F10.13c":null,"YBR172C":null,"YPL105C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"GYF domain","id":"PF02213","interpro_description":"GYF domain","interpro_id":"IPR003169","interpro_name":"GYF","locations":[{"end":380,"start":337}],"match_end":380,"match_start":337,"name":"GYF"},{"dbname":"CDD","description":"GYF","id":"cd00072","interpro_description":"GYF domain","interpro_id":"IPR003169","interpro_name":"GYF","locations":[{"end":379,"start":337}],"match_end":379,"match_start":337,"name":"GYF"},{"dbname":"PROSITE_PROFILES","description":"GYF domain profile.","id":"PS50829","interpro_description":"GYF domain","interpro_id":"IPR003169","interpro_name":"GYF","locations":[{"end":382,"start":334}],"match_end":382,"match_start":334,"name":"GYF"},{"dbname":"SMART","id":"SM00444","interpro_description":"GYF domain","interpro_id":"IPR003169","interpro_name":"GYF","locations":[{"end":390,"start":335}],"match_end":390,"match_start":335,"name":"gyf_5"},{"dbname":"SUPERFAMILY","id":"SSF55277","interpro_description":"GYF-like domain superfamily","interpro_id":"IPR035445","interpro_name":"GYF-like_dom_sf","locations":[{"end":387,"start":320}],"match_end":387,"match_start":320,"name":"GYF domain"},{"dbname":"GENE3D","id":"G3DSA:3.30.1490.40","interpro_description":"GYF-like domain superfamily","interpro_id":"IPR035445","interpro_name":"GYF-like_dom_sf","locations":[{"end":397,"start":328}],"match_end":397,"match_start":328},{"dbname":"PANTHER","id":"PTHR14445","interpro_description":"GRB10-interacting GYF","interpro_id":"IPR051640","interpro_name":"GRB10-interact_GYF","locations":[{"end":404,"start":146}],"match_end":404,"match_start":146,"name":"GRB10 INTERACTING GYF PROTEIN"},{"dbname":"COILS","id":"Coil","locations":[{"end":664,"start":640}],"match_end":664,"match_start":640,"name":"Coil"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":28,"start":1},{"end":272,"start":250},{"end":522,"start":475},{"end":630,"start":562},{"end":943,"start":892}],"match_end":943,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":925,"start":910}],"match_end":925,"match_start":910,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":28,"start":15},{"end":500,"start":479},{"end":522,"start":513},{"end":586,"start":565},{"end":614,"start":603}],"match_end":614,"match_start":15,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":512,"start":501}],"match_end":512,"match_start":501,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1307910,"start_pos":1304946,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":131,"start":122}},{"range":{"end":210,"start":195}},{"range":{"end":242,"start":230}},{"range":{"end":403,"start":390}},{"range":{"end":455,"start":442}},{"range":{"end":669,"start":659}},{"range":{"end":760,"start":734}},{"range":{"end":924,"start":909}}],"name":"mpd2","ortholog_annotations":[{"gene_uniquename":"SJAG_01279","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11960","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01279","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:9126","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01279","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC4F10.13c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01279","ortholog_taxonid":4932,"ortholog_uniquename":"YBR172C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01279","ortholog_taxonid":4932,"ortholog_uniquename":"YBR172C","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01279","ortholog_taxonid":4932,"ortholog_uniquename":"YPL105C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01279","ortholog_taxonid":4932,"ortholog_uniquename":"YPL105C","reference_uniquename":"PMID:26896847"}],"product":"GYF domain protein","references_by_uniquename":{"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{},"subset_termids":["GO:0005829","GO:0016192"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005829":null,"GO:0006888":null,"MONDO:0011896":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01279.1"],"transcripts_by_uniquename":{"SJAG_01279.1":null},"uniprot_identifier":"B6K087","uniquename":"SJAG_01279"}


id: SJAG_01280
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91974],"is_not":false,"summary":null,"term":"GO:0042254"}],"cellular_component":[{"annotations":[91972],"is_not":false,"summary":null,"term":"GO:0005730"}],"molecular_function":[{"annotations":[65762],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR013087","InterPro:IPR022755","UniProtKB/TrEMBL:B6K088","EnsemblGenomes-Tr:EEB06238","EnsemblGenomes-Gn:SJAG_01280","InterPro:IPR036236","GOA:B6K088"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":23,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"noc1","uniquename":"SJAG_01275"},{"name":"mnn9","uniquename":"SJAG_01276"},{"name":"spn1","uniquename":"SJAG_01277"},{"name":"fta1","uniquename":"SJAG_01278"},{"name":"mpd2","uniquename":"SJAG_01279"},{"name":"bud20","uniquename":"SJAG_01280"},{"name":"sst2","uniquename":"SJAG_01281"},{"name":"srp14","uniquename":"SJAG_01282"},{"name":"atg4","uniquename":"SJAG_01283"},{"uniquename":"SJAG_01284"},{"name":"rbd4","uniquename":"SJAG_01285"}],"genes_by_uniquename":{"HGNC:30943":null,"SJAG_01280":null,"SPAC19B12.11c":null,"YLR074C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Zinc-finger double-stranded RNA-binding","id":"PF12171","interpro_description":"Zinc finger, double-stranded RNA binding","interpro_id":"IPR022755","interpro_name":"Znf_C2H2_jaz","locations":[{"end":81,"start":55}],"match_end":81,"match_start":55,"name":"zf-C2H2_jaz"},{"dbname":"PROSITE_PATTERNS","description":"Zinc finger C2H2 type domain signature.","id":"PS00028","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":80,"start":58}],"match_end":80,"match_start":58,"name":"ZINC_FINGER_C2H2_1"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger C2H2 type domain profile.","id":"PS50157","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":85,"start":56}],"match_end":85,"match_start":56,"name":"ZINC_FINGER_C2H2_2"},{"dbname":"FUNFAM","description":"Zinc finger protein 593","id":"G3DSA:3.30.160.60:FF:000299","locations":[{"end":105,"start":42}],"match_end":105,"match_start":42},{"dbname":"SUPERFAMILY","id":"SSF57667","interpro_description":"Zinc finger C2H2 superfamily","interpro_id":"IPR036236","interpro_name":"Znf_C2H2_sf","locations":[{"end":102,"start":43}],"match_end":102,"match_start":43,"name":"beta-beta-alpha zinc fingers"},{"dbname":"GENE3D","id":"G3DSA:3.30.160.60","locations":[{"end":104,"start":42}],"match_end":104,"match_start":42,"name":"Classic Zinc Finger"},{"dbname":"PANTHER","id":"PTHR46095","interpro_description":"C2H2-type Zinc Finger Maturation Protein","interpro_id":"IPR051879","interpro_name":"C2H2-ZF_Maturation_Protein","locations":[{"end":122,"start":1}],"match_end":122,"match_start":1,"name":"ZINC FINGER PROTEIN 593"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":23,"start":1}],"match_end":23,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Positive-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Positive-Polyelectrolyte","locations":[{"end":13,"start":1}],"match_end":13,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1308708,"start_pos":1308325,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":53,"start":43}}],"name":"bud20","ortholog_annotations":[{"gene_uniquename":"SJAG_01280","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:30943","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01280","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19B12.11c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01280","ortholog_taxonid":4932,"ortholog_uniquename":"YLR074C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01280","ortholog_taxonid":4932,"ortholog_uniquename":"YLR074C","reference_uniquename":"PMID:26896847"}],"product":"zinc finger ribosome biogenesis protein Bud20","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"]}},"subset_termids":["GO:0005634","GO:0042254","GO:0005730"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005730":null,"GO:0008270":null,"GO:0042254":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01280.1"],"transcripts_by_uniquename":{"SJAG_01280.1":null},"uniprot_identifier":"B6K088","uniquename":"SJAG_01280"}


id: SJAG_01281
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91965],"is_not":false,"summary":null,"term":"GO:0120113"},{"annotations":[91968],"is_not":false,"summary":null,"term":"GO:0043328"}],"cellular_component":[{"annotations":[91961],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[79488],"is_not":false,"summary":null,"term":"GO:0005768"},{"annotations":[79489],"is_not":false,"summary":null,"term":"GO:0016020"}],"molecular_function":[{"annotations":[79491],"is_not":false,"summary":null,"term":"GO:0061578"},{"annotations":[68639],"is_not":false,"summary":null,"term":"GO:0140492"},{"annotations":[91971],"is_not":false,"summary":null,"term":"GO:0008270"}],"mondo":[{"annotations":[85988],"is_not":false,"summary":null,"term":"MONDO:0013659"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01281","GOA:B6K089","InterPro:IPR037518","InterPro:IPR000555","UniProtKB/TrEMBL:B6K089","EnsemblGenomes-Tr:EEB06239"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":224,"start":197}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mnn9","uniquename":"SJAG_01276"},{"name":"spn1","uniquename":"SJAG_01277"},{"name":"fta1","uniquename":"SJAG_01278"},{"name":"mpd2","uniquename":"SJAG_01279"},{"name":"bud20","uniquename":"SJAG_01280"},{"name":"sst2","uniquename":"SJAG_01281"},{"name":"srp14","uniquename":"SJAG_01282"},{"name":"atg4","uniquename":"SJAG_01283"},{"uniquename":"SJAG_01284"},{"name":"rbd4","uniquename":"SJAG_01285"},{"name":"fcp1","uniquename":"SJAG_01286"}],"genes_by_uniquename":{"HGNC:16950":null,"SJAG_01281":null,"SPAC19B12.10":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"JAB1/Mov34/MPN/PAD-1 ubiquitin protease","id":"PF01398","interpro_description":"JAB1/MPN/MOV34 metalloenzyme domain","interpro_id":"IPR000555","interpro_name":"JAMM/MPN+_dom","locations":[{"end":372,"start":265}],"match_end":372,"match_start":265,"name":"JAB"},{"dbname":"PFAM","description":"USP8 dimerisation domain","id":"PF08969","interpro_description":"USP8 dimerisation domain","interpro_id":"IPR015063","interpro_name":"USP8_dimer","locations":[{"end":108,"start":14}],"match_end":108,"match_start":14,"name":"USP8_dimer"},{"dbname":"CDD","description":"MPN_AMSH_like","id":"cd08066","interpro_description":"STAMBP/STALP-like, MPN domain","interpro_id":"IPR044098","interpro_name":"STAMBP/STALP-like_MPN","locations":[{"end":439,"start":265}],"match_end":439,"match_start":265,"name":"MPN_AMSH_like"},{"dbname":"PROSITE_PROFILES","description":"MPN domain profile.","id":"PS50249","interpro_description":"MPN domain","interpro_id":"IPR037518","interpro_name":"MPN","locations":[{"end":398,"start":267}],"match_end":398,"match_start":267,"name":"MPN"},{"dbname":"SMART","id":"SM00232","interpro_description":"JAB1/MPN/MOV34 metalloenzyme domain","interpro_id":"IPR000555","interpro_name":"JAMM/MPN+_dom","locations":[{"end":394,"start":267}],"match_end":394,"match_start":267,"name":"pad1_6"},{"dbname":"FUNFAM","description":"AMSH-like protease sst2","id":"G3DSA:3.40.140.10:FF:000033","locations":[{"end":439,"start":246}],"match_end":439,"match_start":246},{"dbname":"SUPERFAMILY","id":"SSF102712","locations":[{"end":400,"start":266}],"match_end":400,"match_start":266,"name":"JAB1/MPN domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.140.10","locations":[{"end":439,"start":246}],"match_end":439,"match_start":246,"name":"Cytidine Deaminase, domain 2"},{"dbname":"GENE3D","id":"G3DSA:1.20.58.80","locations":[{"end":134,"start":5}],"match_end":134,"match_start":5},{"dbname":"PANTHER","id":"PTHR12947","locations":[{"end":439,"start":11}],"match_end":439,"match_start":11,"name":"AMSH-LIKE PROTEASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":224,"start":197}],"match_end":224,"match_start":197,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1310435,"start_pos":1308983,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":231,"start":220}}],"name":"sst2","ortholog_annotations":[{"gene_uniquename":"SJAG_01281","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16950","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01281","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19B12.10","reference_uniquename":"PMID:21511999"}],"product":"human AMSH/STAMBP protein homolog, ubiquitin specific-protease","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"],"not-binding":["GO:0140492","GO:0061578"]}},"subset_termids":["GO:0008233","GO:0140096","GO:0006605","GO:0030163","GO:0016192","GO:0031410","GO:0005768"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005768":null,"GO:0008270":null,"GO:0016020":null,"GO:0032153":null,"GO:0043328":null,"GO:0061578":null,"GO:0120113":null,"GO:0140492":null,"MONDO:0013659":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01281.1"],"transcripts_by_uniquename":{"SJAG_01281.1":null},"uniprot_identifier":"B6K089","uniquename":"SJAG_01281"}


id: SJAG_01282
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91957],"is_not":false,"summary":null,"term":"GO:0006886"},{"annotations":[91958],"is_not":false,"summary":null,"term":"GO:0006617"}],"cellular_component":[{"annotations":[91954],"is_not":false,"summary":null,"term":"GO:0005730"},{"annotations":[56982],"is_not":false,"summary":null,"term":"GO:0005786"}],"molecular_function":[{"annotations":[56980],"is_not":false,"summary":null,"term":"GO:0008312"},{"annotations":[56979],"is_not":false,"summary":null,"term":"GO:0030942"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06240","InterPro:IPR009018","UniProtKB/TrEMBL:B6K090","GOA:B6K090","InterPro:IPR003210","EnsemblGenomes-Gn:SJAG_01282"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":22,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"spn1","uniquename":"SJAG_01277"},{"name":"fta1","uniquename":"SJAG_01278"},{"name":"mpd2","uniquename":"SJAG_01279"},{"name":"bud20","uniquename":"SJAG_01280"},{"name":"sst2","uniquename":"SJAG_01281"},{"name":"srp14","uniquename":"SJAG_01282"},{"name":"atg4","uniquename":"SJAG_01283"},{"uniquename":"SJAG_01284"},{"name":"rbd4","uniquename":"SJAG_01285"},{"name":"fcp1","uniquename":"SJAG_01286"},{"name":"rps3002","uniquename":"SJAG_01287"}],"genes_by_uniquename":{"HGNC:11299":null,"SJAG_01282":null,"SPAC19B12.09":null,"YDL092W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Signal recognition particle 14kD protein","id":"PF02290","interpro_description":"Signal recognition particle, SRP14 subunit","interpro_id":"IPR003210","interpro_name":"Signal_recog_particle_SRP14","locations":[{"end":109,"start":24}],"match_end":109,"match_start":24,"name":"SRP14"},{"dbname":"SUPERFAMILY","id":"SSF54762","interpro_description":"Signal recognition particle, SRP9/SRP14 subunit","interpro_id":"IPR009018","interpro_name":"Signal_recog_particle_SRP9/14","locations":[{"end":112,"start":23}],"match_end":112,"match_start":23,"name":"Signal recognition particle alu RNA binding heterodimer, SRP9/14"},{"dbname":"GENE3D","id":"G3DSA:3.30.720.10","interpro_description":"Signal recognition particle, SRP9/SRP14 subunit","interpro_id":"IPR009018","interpro_name":"Signal_recog_particle_SRP9/14","locations":[{"end":126,"start":22}],"match_end":126,"match_start":22,"name":"Signal recognition particle alu RNA binding heterodimer, srp9/1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":22,"start":1}],"match_end":22,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1311234,"start_pos":1310764,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":120,"start":102}}],"name":"srp14","ortholog_annotations":[{"gene_uniquename":"SJAG_01282","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:11299","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01282","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19B12.09","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01282","ortholog_taxonid":4932,"ortholog_uniquename":"YDL092W","reference_uniquename":"PMID:29761456"}],"product":"signal recognition particle subunit Srp14","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008312","GO:0030942"]}},"subset_termids":["GO:0005048","GO:0065003","GO:0006605","GO:0005730","GO:0005634"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005730":null,"GO:0005786":null,"GO:0006617":null,"GO:0006886":null,"GO:0008312":null,"GO:0030942":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01282.1"],"transcripts_by_uniquename":{"SJAG_01282.1":null},"uniprot_identifier":"B6K090","uniquename":"SJAG_01282"}


id: SJAG_01283
data:
  {"cv_annotations":{"biological_process":[{"annotations":[77311],"is_not":false,"summary":null,"term":"GO:0035973"},{"annotations":[77312],"is_not":false,"summary":null,"term":"GO:0000045"},{"annotations":[77313],"is_not":false,"summary":null,"term":"GO:0000423"},{"annotations":[77310],"is_not":false,"summary":null,"term":"GO:0034727"},{"annotations":[77308],"is_not":false,"summary":null,"term":"GO:0016485"}],"cellular_component":[{"annotations":[91943],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[91944],"is_not":false,"summary":null,"term":"GO:0005634"},{"annotations":[65804],"is_not":false,"summary":null,"term":"GO:0000407"}],"molecular_function":[{"annotations":[77314],"is_not":false,"summary":null,"term":"GO:0004197"},{"annotations":[77315],"is_not":false,"summary":null,"term":"GO:0019786"}]},"dbxrefs":["GOA:B6K091","InterPro:IPR038765","InterPro:IPR005078","EnsemblGenomes-Tr:EEB06241","UniProtKB/TrEMBL:B6K091","EnsemblGenomes-Gn:SJAG_01283"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"fta1","uniquename":"SJAG_01278"},{"name":"mpd2","uniquename":"SJAG_01279"},{"name":"bud20","uniquename":"SJAG_01280"},{"name":"sst2","uniquename":"SJAG_01281"},{"name":"srp14","uniquename":"SJAG_01282"},{"name":"atg4","uniquename":"SJAG_01283"},{"uniquename":"SJAG_01284"},{"name":"rbd4","uniquename":"SJAG_01285"},{"name":"fcp1","uniquename":"SJAG_01286"},{"name":"rps3002","uniquename":"SJAG_01287"},{"name":"bgs3","uniquename":"SJAG_01288"}],"genes_by_uniquename":{"HGNC:16040":null,"HGNC:16489":null,"HGNC:20789":null,"HGNC:20790":null,"SJAG_01283":null,"SPAC19B12.08":null,"YNL223W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Peptidase C54 catalytic domain","id":"PF03416","interpro_description":"Peptidase C54, catalytic domain","interpro_id":"IPR046792","interpro_name":"Peptidase_C54_cat","locations":[{"end":283,"start":42}],"match_end":283,"match_start":42,"name":"Peptidase_C54"},{"dbname":"SUPERFAMILY","id":"SSF54001","interpro_description":"Papain-like cysteine peptidase superfamily","interpro_id":"IPR038765","interpro_name":"Papain-like_cys_pep_sf","locations":[{"end":290,"start":7}],"match_end":290,"match_start":7,"name":"Cysteine proteinases"},{"dbname":"PANTHER","id":"PTHR22624","interpro_description":"Peptidase C54","interpro_id":"IPR005078","interpro_name":"Peptidase_C54","locations":[{"end":308,"start":19}],"match_end":308,"match_start":19,"name":"CYSTEINE PROTEASE ATG4"}],"location":{"chromosome_name":"supercont5.3","end_pos":1312606,"start_pos":1311581,"strand":"reverse"},"name":"atg4","ortholog_annotations":[{"gene_uniquename":"SJAG_01283","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16040","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01283","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:16489","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01283","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20789","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01283","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:20790","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01283","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19B12.08","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01283","ortholog_taxonid":4932,"ortholog_uniquename":"YNL223W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01283","ortholog_taxonid":4932,"ortholog_uniquename":"YNL223W","reference_uniquename":"PMID:26896847"}],"product":"Atg8 deconjugator Atg4","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0019786","GO:0004197"]}},"subset_termids":["GO:0008233","GO:0005829","GO:0005634","GO:0006914","GO:0000407","GO:0051604","GO:0140096"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000045":null,"GO:0000407":null,"GO:0000423":null,"GO:0004197":null,"GO:0005634":null,"GO:0005829":null,"GO:0016485":null,"GO:0019786":null,"GO:0034727":null,"GO:0035973":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01283.1"],"transcripts_by_uniquename":{"SJAG_01283.1":null},"uniprot_identifier":"B6K091","uniquename":"SJAG_01283"}


id: SJAG_01284
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[91940],"is_not":false,"summary":null,"term":"GO:0005829"},{"annotations":[91941],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[57565],"is_not":false,"summary":null,"term":"GO:0008270"}]},"dbxrefs":["InterPro:IPR013087","InterPro:IPR036236","InterPro:IPR040048","EnsemblGenomes-Tr:EEB06242","GOA:B6K092","UniProtKB/TrEMBL:B6K092","EnsemblGenomes-Gn:SJAG_01284","InterPro:IPR041661"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"mpd2","uniquename":"SJAG_01279"},{"name":"bud20","uniquename":"SJAG_01280"},{"name":"sst2","uniquename":"SJAG_01281"},{"name":"srp14","uniquename":"SJAG_01282"},{"name":"atg4","uniquename":"SJAG_01283"},{"uniquename":"SJAG_01284"},{"name":"rbd4","uniquename":"SJAG_01285"},{"name":"fcp1","uniquename":"SJAG_01286"},{"name":"rps3002","uniquename":"SJAG_01287"},{"name":"bgs3","uniquename":"SJAG_01288"},{"name":"gas1","uniquename":"SJAG_01290"}],"genes_by_uniquename":{"HGNC:13070":null,"SJAG_01284":null,"SPAC19B12.07c":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Protein arginine N-methyltransferase 3, C2H2 zinc finger domain","id":"PF21137","interpro_description":"Protein arginine N-methyltransferase 3-like, C2H2 zinc finger domain","interpro_id":"IPR049482","interpro_name":"ANM3-like_C2H2_Zf","locations":[{"end":300,"start":261}],"match_end":300,"match_start":261,"name":"ANM3_C2H2_Zf"},{"dbname":"PFAM","description":"C2H2 type zinc-finger (2 copies)","id":"PF12756","interpro_description":"ZN622/Rei1/Reh1, zinc finger C2H2-type","interpro_id":"IPR041661","interpro_name":"ZN622/Rei1/Reh1_Znf-C2H2","locations":[{"end":196,"start":108}],"match_end":196,"match_start":108,"name":"zf-C2H2_2"},{"dbname":"PROSITE_PATTERNS","description":"Zinc finger C2H2 type domain signature.","id":"PS00028","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":180,"start":158}],"match_end":180,"match_start":158,"name":"ZINC_FINGER_C2H2_1"},{"dbname":"PROSITE_PROFILES","description":"Zinc finger C2H2 type domain profile.","id":"PS50157","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":185,"start":156}],"match_end":185,"match_start":156,"name":"ZINC_FINGER_C2H2_2"},{"dbname":"SMART","id":"SM00355","interpro_description":"Zinc finger C2H2-type","interpro_id":"IPR013087","interpro_name":"Znf_C2H2_type","locations":[{"end":129,"start":106},{"end":180,"start":156},{"end":253,"start":231}],"match_end":253,"match_start":106,"name":"c2h2final6"},{"dbname":"SUPERFAMILY","id":"SSF57667","interpro_description":"Zinc finger C2H2 superfamily","interpro_id":"IPR036236","interpro_name":"Znf_C2H2_sf","locations":[{"end":205,"start":146},{"end":315,"start":217}],"match_end":315,"match_start":146,"name":"beta-beta-alpha zinc fingers"},{"dbname":"PANTHER","id":"PTHR13267","interpro_description":"Zinc finger protein 277","interpro_id":"IPR040048","interpro_name":"ZNF277","locations":[{"end":315,"start":67}],"match_end":315,"match_start":67,"name":"ZINC FINGER PROTEIN 277"}],"location":{"chromosome_name":"supercont5.3","end_pos":1314574,"start_pos":1313515,"strand":"forward"},"ortholog_annotations":[{"gene_uniquename":"SJAG_01284","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:13070","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01284","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19B12.07c","reference_uniquename":"PMID:21511999"}],"product":"zinc finger C2H2-type, human ZNF277 ortholog, implicated in transcriptional regulation","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"binding":["GO:0008270"]}},"subset_termids":["GO:0005634","GO:0005829"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0005829":null,"GO:0008270":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01284.1"],"transcripts_by_uniquename":{"SJAG_01284.1":null},"uniprot_identifier":"B6K092","uniquename":"SJAG_01284"}


id: SJAG_01285
data:
  {"cv_annotations":{"cellular_component":[{"annotations":[91936],"is_not":false,"summary":null,"term":"GO:0030137"},{"annotations":[91937],"is_not":false,"summary":null,"term":"GO:0005794"},{"annotations":[68389],"is_not":false,"summary":null,"term":"GO:0016020"}],"molecular_function":[{"annotations":[68390],"is_not":false,"summary":null,"term":"GO:0004252"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06243","UniProtKB/TrEMBL:B6K093","EnsemblGenomes-Gn:SJAG_01285","InterPro:IPR022764","GOA:B6K093"],"deletion_viability":"unknown","feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"bud20","uniquename":"SJAG_01280"},{"name":"sst2","uniquename":"SJAG_01281"},{"name":"srp14","uniquename":"SJAG_01282"},{"name":"atg4","uniquename":"SJAG_01283"},{"uniquename":"SJAG_01284"},{"name":"rbd4","uniquename":"SJAG_01285"},{"name":"fcp1","uniquename":"SJAG_01286"},{"name":"rps3002","uniquename":"SJAG_01287"},{"name":"bgs3","uniquename":"SJAG_01288"},{"name":"gas1","uniquename":"SJAG_01290"},{"name":"ceo5","uniquename":"SJAG_01291"}],"genes_by_uniquename":{"SJAG_01285":null,"SPAC19B12.06c":null,"YPL246C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Rhomboid family","id":"PF01694","interpro_description":"Peptidase S54, rhomboid domain","interpro_id":"IPR022764","interpro_name":"Peptidase_S54_rhomboid_dom","locations":[{"end":191,"start":54}],"match_end":191,"match_start":54,"name":"Rhomboid"},{"dbname":"SUPERFAMILY","id":"SSF144091","interpro_description":"Rhomboid-like superfamily","interpro_id":"IPR035952","interpro_name":"Rhomboid-like_sf","locations":[{"end":191,"start":15}],"match_end":191,"match_start":15,"name":"Rhomboid-like"},{"dbname":"GENE3D","id":"G3DSA:1.20.1540.10","interpro_description":"Rhomboid-like superfamily","interpro_id":"IPR035952","interpro_name":"Rhomboid-like_sf","locations":[{"end":195,"start":10}],"match_end":195,"match_start":10}],"location":{"chromosome_name":"supercont5.3","end_pos":1315587,"start_pos":1314775,"strand":"forward"},"name":"rbd4","ortholog_annotations":[{"gene_uniquename":"SJAG_01285","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19B12.06c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01285","ortholog_taxonid":4932,"ortholog_uniquename":"YPL246C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01285","ortholog_taxonid":4932,"ortholog_uniquename":"YPL246C","reference_uniquename":"PMID:26896847"}],"product":"rhomboid family protease, unknown biological role, associated with COP1 coated vesicle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0004252"]}},"subset_termids":["GO:0008233","GO:0031410","GO:0140096","GO:0005794"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0004252":null,"GO:0005794":null,"GO:0016020":null,"GO:0030137":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":43,"start":21}},{"assigned_by":"TMHMM","range":{"end":80,"start":58}},{"assigned_by":"TMHMM","range":{"end":115,"start":93}},{"assigned_by":"TMHMM","range":{"end":141,"start":119}},{"assigned_by":"TMHMM","range":{"end":171,"start":154}},{"assigned_by":"TMHMM","range":{"end":197,"start":175}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01285.1"],"transcripts_by_uniquename":{"SJAG_01285.1":null},"uniprot_identifier":"B6K093","uniquename":"SJAG_01285"}


id: SJAG_01286
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91933],"is_not":false,"summary":null,"term":"GO:0006357"},{"annotations":[91934],"is_not":false,"summary":null,"term":"GO:0023052"}],"cellular_component":[{"annotations":[69466],"is_not":false,"summary":null,"term":"GO:0005634"}],"molecular_function":[{"annotations":[80186],"is_not":false,"summary":null,"term":"GO:0008420"}],"mondo":[{"annotations":[87116],"is_not":false,"summary":null,"term":"MONDO:0011402"}]},"dbxrefs":["GOA:B6K094","EnsemblGenomes-Tr:EEB06244","InterPro:IPR036412","InterPro:IPR001357","EnsemblGenomes-Gn:SJAG_01286","InterPro:IPR011947","InterPro:IPR023214","InterPro:IPR036420","UniProtKB/TrEMBL:B6K094","InterPro:IPR004274","InterPro:IPR039189"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":361,"start":328}},{"range":{"end":722,"start":562}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"sst2","uniquename":"SJAG_01281"},{"name":"srp14","uniquename":"SJAG_01282"},{"name":"atg4","uniquename":"SJAG_01283"},{"uniquename":"SJAG_01284"},{"name":"rbd4","uniquename":"SJAG_01285"},{"name":"fcp1","uniquename":"SJAG_01286"},{"name":"rps3002","uniquename":"SJAG_01287"},{"name":"bgs3","uniquename":"SJAG_01288"},{"name":"gas1","uniquename":"SJAG_01290"},{"name":"ceo5","uniquename":"SJAG_01291"},{"name":"grx1","uniquename":"SJAG_01292"}],"genes_by_uniquename":{"HGNC:2498":null,"SJAG_01286":null,"SPAC19B12.05c":null,"YMR277W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"NLI interacting factor-like phosphatase","id":"PF03031","interpro_description":"FCP1 homology domain","interpro_id":"IPR004274","interpro_name":"FCP1_dom","locations":[{"end":330,"start":162}],"match_end":330,"match_start":162,"name":"NIF"},{"dbname":"PFAM","description":"twin BRCT domain","id":"PF12738","interpro_description":"BRCT domain","interpro_id":"IPR001357","interpro_name":"BRCT_dom","locations":[{"end":533,"start":485}],"match_end":533,"match_start":485,"name":"PTCB-BRCT"},{"dbname":"CDD","description":"HAD_FCP1-like","id":"cd07521","locations":[{"end":308,"start":160}],"match_end":308,"match_start":160,"name":"HAD_FCP1-like"},{"dbname":"CDD","description":"BRCT_CTDP1","id":"cd17729","locations":[{"end":546,"start":450}],"match_end":546,"match_start":450,"name":"BRCT_CTDP1"},{"dbname":"PROSITE_PROFILES","description":"BRCT domain profile.","id":"PS50172","interpro_description":"BRCT domain","interpro_id":"IPR001357","interpro_name":"BRCT_dom","locations":[{"end":551,"start":458}],"match_end":551,"match_start":458,"name":"BRCT"},{"dbname":"PROSITE_PROFILES","description":"FCP1 homology domain profile.","id":"PS50969","interpro_description":"FCP1 homology domain","interpro_id":"IPR004274","interpro_name":"FCP1_dom","locations":[{"end":332,"start":156}],"match_end":332,"match_start":156,"name":"FCP1"},{"dbname":"SMART","id":"SM00577","interpro_description":"FCP1 homology domain","interpro_id":"IPR004274","interpro_name":"FCP1_dom","locations":[{"end":318,"start":159}],"match_end":318,"match_start":159,"name":"forpap2"},{"dbname":"SUPERFAMILY","id":"SSF56784","interpro_description":"HAD-like superfamily","interpro_id":"IPR036412","interpro_name":"HAD-like_sf","locations":[{"end":331,"start":152}],"match_end":331,"match_start":152,"name":"HAD-like"},{"dbname":"SUPERFAMILY","id":"SSF52113","interpro_description":"BRCT domain superfamily","interpro_id":"IPR036420","interpro_name":"BRCT_dom_sf","locations":[{"end":553,"start":462}],"match_end":553,"match_start":462,"name":"BRCT domain"},{"dbname":"GENE3D","id":"G3DSA:3.40.50.1000","interpro_description":"HAD superfamily","interpro_id":"IPR023214","interpro_name":"HAD_sf","locations":[{"end":307,"start":152}],"match_end":307,"match_start":152},{"dbname":"GENE3D","id":"G3DSA:3.40.50.10190","interpro_description":"BRCT domain superfamily","interpro_id":"IPR036420","interpro_name":"BRCT_dom_sf","locations":[{"end":552,"start":462}],"match_end":552,"match_start":462,"name":"BRCT domain"},{"dbname":"GENE3D","id":"G3DSA:1.10.287.10","locations":[{"end":339,"start":308}],"match_end":339,"match_start":308},{"dbname":"PANTHER","id":"PTHR23081","interpro_description":"CTD phosphatase Fcp1","interpro_id":"IPR039189","interpro_name":"Fcp1","locations":[{"end":695,"start":85}],"match_end":695,"match_start":85,"name":"RNA POLYMERASE II CTD PHOSPHATASE"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":361,"start":328},{"end":722,"start":562}],"match_end":722,"match_start":328,"name":"disorder_prediction"},{"dbname":"MOBIDB-Low-complexity","description":"consensus disorder prediction","id":"mobidb-lite-Low-complexity","locations":[{"end":578,"start":569}],"match_end":578,"match_start":569,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":699,"start":690}],"match_end":699,"match_start":690,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":668,"start":652},{"end":686,"start":677}],"match_end":686,"match_start":652,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":347,"start":334},{"end":636,"start":622}],"match_end":636,"match_start":334,"name":"disorder_prediction"},{"dbname":"NCBIFAM","description":"FCP1-like phosphatase, phosphatase domain","id":"TIGR02250","interpro_description":"FCP1-like phosphatase, phosphatase domain","interpro_id":"IPR011947","interpro_name":"FCP1_euk","locations":[{"end":314,"start":155}],"match_end":314,"match_start":155,"name":"FCP1_euk"}],"location":{"chromosome_name":"supercont5.3","end_pos":1318518,"start_pos":1315987,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":584,"start":568}}],"name":"fcp1","ortholog_annotations":[{"gene_uniquename":"SJAG_01286","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:2498","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01286","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19B12.05c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01286","ortholog_taxonid":4932,"ortholog_uniquename":"YMR277W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01286","ortholog_taxonid":4932,"ortholog_uniquename":"YMR277W","reference_uniquename":"PMID:26896847"}],"product":"RNA polymerase II CTD phosphatase Fcp1","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PB_REF:0000006":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0008420"]}},"subset_termids":["GO:0140096","MONDO:0005559","GO:0016788","GO:0004721","GO:0023052","MONDO:0002320","GO:0006355","GO:0005634","MONDO:0006025","GO:0006351"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0005634":null,"GO:0006357":null,"GO:0008420":null,"GO:0023052":null,"MONDO:0011402":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01286.1"],"transcripts_by_uniquename":{"SJAG_01286.1":null},"uniprot_identifier":"B6K094","uniquename":"SJAG_01286"}


id: SJAG_01287
data:
  {"cv_annotations":{"biological_process":[{"annotations":[106450],"is_not":false,"summary":null,"term":"GO:0002181"},{"annotations":[106451],"is_not":false,"summary":null,"term":"GO:0042254"}],"cellular_component":[{"annotations":[71510],"is_not":false,"summary":null,"term":"GO:0022627"}],"molecular_function":[{"annotations":[58610],"is_not":false,"summary":null,"term":"GO:0003735"}]},"dbxrefs":["EnsemblGenomes-Tr:EEB06245","GOA:B6K095","InterPro:IPR006846","EnsemblGenomes-Gn:SJAG_01287","UniProtKB/TrEMBL:B6K095"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":34,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"srp14","uniquename":"SJAG_01282"},{"name":"atg4","uniquename":"SJAG_01283"},{"uniquename":"SJAG_01284"},{"name":"rbd4","uniquename":"SJAG_01285"},{"name":"fcp1","uniquename":"SJAG_01286"},{"name":"rps3002","uniquename":"SJAG_01287"},{"name":"bgs3","uniquename":"SJAG_01288"},{"name":"gas1","uniquename":"SJAG_01290"},{"name":"ceo5","uniquename":"SJAG_01291"},{"name":"grx1","uniquename":"SJAG_01292"},{"name":"hit1","uniquename":"SJAG_05223"}],"genes_by_uniquename":{"HGNC:3597":null,"SJAG_01287":null,"SPBC19G7.03c":null,"YLR287C-A":null,"YOR182C":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"Ribosomal protein S30","id":"PF04758","interpro_description":"Small ribosomal subunit protein eS30","interpro_id":"IPR006846","interpro_name":"Ribosomal_eS30","locations":[{"end":60,"start":3}],"match_end":60,"match_start":3,"name":"Ribosomal_S30"},{"dbname":"PANTHER","id":"PTHR12650","locations":[{"end":60,"start":1}],"match_end":60,"match_start":1,"name":"40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":34,"start":1}],"match_end":34,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1318972,"start_pos":1318674,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":30,"start":18}}],"name":"rps3002","ortholog_annotations":[{"gene_uniquename":"SJAG_01287","ortholog_taxonid":9606,"ortholog_uniquename":"HGNC:3597","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01287","ortholog_taxonid":4896,"ortholog_uniquename":"SPBC19G7.03c","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01287","ortholog_taxonid":4932,"ortholog_uniquename":"YLR287C-A","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01287","ortholog_taxonid":4932,"ortholog_uniquename":"YLR287C-A","reference_uniquename":"PMID:26896847"},{"gene_uniquename":"SJAG_01287","ortholog_taxonid":4932,"ortholog_uniquename":"YOR182C","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01287","ortholog_taxonid":4932,"ortholog_uniquename":"YOR182C","reference_uniquename":"PMID:26896847"}],"product":"40S ribosomal protein S30","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:26896847":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003735"]}},"subset_termids":["GO:0005198","GO:0005829","GO:0022626","GO:0042254","GO:0002181"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0002181":null,"GO:0003735":null,"GO:0022627":null,"GO:0042254":null},"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01287.1"],"transcripts_by_uniquename":{"SJAG_01287.1":null},"uniprot_identifier":"B6K095","uniquename":"SJAG_01287"}


id: SJAG_01288
data:
  {"cv_annotations":{"biological_process":[{"annotations":[91924],"is_not":false,"summary":null,"term":"GO:0071970"}],"cellular_component":[{"annotations":[69723],"is_not":false,"summary":null,"term":"GO:0000148"},{"annotations":[91917],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[91918],"is_not":false,"summary":null,"term":"GO:0051286"},{"annotations":[91919],"is_not":false,"summary":null,"term":"GO:0005737"},{"annotations":[91920],"is_not":false,"summary":null,"term":"GO:0009277"},{"annotations":[80375],"is_not":false,"summary":null,"term":"GO:0005886"},{"annotations":[91922],"is_not":false,"summary":null,"term":"GO:0030427"}],"molecular_function":[{"annotations":[80376],"is_not":false,"summary":null,"term":"GO:0003843"}]},"dbxrefs":["InterPro:IPR026899","InterPro:IPR003440","EnsemblGenomes-Tr:EEB06246","UniProtKB/TrEMBL:B6K096","EnsemblGenomes-Gn:SJAG_01288","GOA:B6K096"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":91,"start":1}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"name":"atg4","uniquename":"SJAG_01283"},{"uniquename":"SJAG_01284"},{"name":"rbd4","uniquename":"SJAG_01285"},{"name":"fcp1","uniquename":"SJAG_01286"},{"name":"rps3002","uniquename":"SJAG_01287"},{"name":"bgs3","uniquename":"SJAG_01288"},{"name":"gas1","uniquename":"SJAG_01290"},{"name":"ceo5","uniquename":"SJAG_01291"},{"name":"grx1","uniquename":"SJAG_01292"},{"name":"hit1","uniquename":"SJAG_05223"},{"name":"nup37","uniquename":"SJAG_01293"}],"genes_by_uniquename":{"SJAG_01288":null,"SPAC19B12.03":null,"YGR032W":null,"YLR342W":null,"YMR306W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"1,3-beta-glucan synthase component","id":"PF02364","interpro_description":"Glycosyl transferase 48 domain","interpro_id":"IPR003440","interpro_name":"Glyco_trans_48_dom","locations":[{"end":1598,"start":781}],"match_end":1598,"match_start":781,"name":"Glucan_synthase"},{"dbname":"PFAM","description":"1,3-beta-glucan synthase subunit FKS1, domain-1","id":"PF14288","interpro_description":"1,3-beta-glucan synthase component FKS1-like, domain-1","interpro_id":"IPR026899","interpro_name":"FKS1-like_dom1","locations":[{"end":378,"start":272}],"match_end":378,"match_start":272,"name":"FKS1_dom1"},{"dbname":"PFAM","description":"1,3-beta-glucan synthase component FKS1, second domain","id":"PF23605","interpro_description":"1,3-beta-glucan synthase component FKS1-like, domain-2","interpro_id":"IPR056261","interpro_name":"FKS1-like_dom2","locations":[{"end":582,"start":410}],"match_end":582,"match_start":410,"name":"FKS1_dom2"},{"dbname":"SMART","id":"SM01205","interpro_description":"1,3-beta-glucan synthase component FKS1-like, domain-1","interpro_id":"IPR026899","interpro_name":"FKS1-like_dom1","locations":[{"end":382,"start":270}],"match_end":382,"match_start":270,"name":"FKS1_dom1_2"},{"dbname":"PANTHER","id":"PTHR12741","locations":[{"end":1740,"start":779}],"match_end":1740,"match_start":779,"name":"LYST-INTERACTING PROTEIN LIP5  DOPAMINE RESPONSIVE PROTEIN DRG-1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":91,"start":1}],"match_end":91,"match_start":1,"name":"disorder_prediction"},{"dbname":"MOBIDB-Negative-Polyelectrolyte","description":"consensus disorder prediction","id":"mobidb-lite-Negative-Polyelectrolyte","locations":[{"end":75,"start":63}],"match_end":75,"match_start":63,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polar","description":"consensus disorder prediction","id":"mobidb-lite-Polar","locations":[{"end":25,"start":15},{"end":91,"start":79}],"match_end":91,"match_start":15,"name":"disorder_prediction"},{"dbname":"MOBIDB-Polyampholyte","description":"consensus disorder prediction","id":"mobidb-lite-Polyampholyte","locations":[{"end":14,"start":1},{"end":62,"start":40}],"match_end":62,"match_start":1,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1325066,"start_pos":1319583,"strand":"reverse"},"low_complexity_region_coords":[{"range":{"end":73,"start":61}},{"range":{"end":488,"start":474}},{"range":{"end":893,"start":876}},{"range":{"end":1338,"start":1327}},{"range":{"end":1586,"start":1578}},{"range":{"end":1788,"start":1769}}],"name":"bgs3","ortholog_annotations":[{"gene_uniquename":"SJAG_01288","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19B12.03","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01288","ortholog_taxonid":4932,"ortholog_uniquename":"YGR032W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01288","ortholog_taxonid":4932,"ortholog_uniquename":"YLR342W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01288","ortholog_taxonid":4932,"ortholog_uniquename":"YMR306W","reference_uniquename":"PMID:29761456"}],"product":"cell wall 1,3-beta-glucan synthase catalytic subunit Bgs3","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:29761456":null},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0003843"]}},"subset_termids":["GO:0005886","GO:0016757","GO:0005618","GO:0005975","GO:0071554"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0000148":null,"GO:0003843":null,"GO:0005737":null,"GO:0005886":null,"GO:0009277":null,"GO:0030427":null,"GO:0032153":null,"GO:0051286":null,"GO:0071970":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":441,"start":419}},{"assigned_by":"TMHMM","range":{"end":483,"start":461}},{"assigned_by":"TMHMM","range":{"end":525,"start":503}},{"assigned_by":"TMHMM","range":{"end":562,"start":540}},{"assigned_by":"TMHMM","range":{"end":612,"start":590}},{"assigned_by":"TMHMM","range":{"end":669,"start":647}},{"assigned_by":"TMHMM","range":{"end":695,"start":676}},{"assigned_by":"TMHMM","range":{"end":1288,"start":1266}},{"assigned_by":"TMHMM","range":{"end":1345,"start":1323}},{"assigned_by":"TMHMM","range":{"end":1394,"start":1372}},{"assigned_by":"TMHMM","range":{"end":1436,"start":1414}},{"assigned_by":"TMHMM","range":{"end":1458,"start":1441}},{"assigned_by":"TMHMM","range":{"end":1551,"start":1529}},{"assigned_by":"TMHMM","range":{"end":1588,"start":1566}},{"assigned_by":"TMHMM","range":{"end":1631,"start":1609}},{"assigned_by":"TMHMM","range":{"end":1742,"start":1720}},{"assigned_by":"TMHMM","range":{"end":1785,"start":1763}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01288.1"],"transcripts_by_uniquename":{"SJAG_01288.1":null},"uniprot_identifier":"B6K096","uniquename":"SJAG_01288"}


id: SJAG_01290
data:
  {"chains":[{"assigned_by":"UniProtKB","range":{"end":545,"start":20}}],"cv_annotations":{"biological_process":[{"annotations":[76215],"is_not":false,"summary":null,"term":"GO:0071970"},{"annotations":[76214],"is_not":false,"summary":null,"term":"GO:0031505"}],"cellular_component":[{"annotations":[91908],"is_not":false,"summary":null,"term":"GO:0032153"},{"annotations":[91909],"is_not":false,"summary":null,"term":"GO:0009897"},{"annotations":[76213],"is_not":false,"summary":null,"term":"GO:0009277"},{"annotations":[91911],"is_not":false,"summary":null,"term":"GO:0035841"},{"annotations":[91912],"is_not":false,"summary":null,"term":"GO:0035840"}],"molecular_function":[{"annotations":[76212],"is_not":false,"summary":null,"term":"GO:0042124"}],"sequence":[{"annotations":[81054],"is_not":false,"summary":null,"term":"SO:0000418"}]},"dbxrefs":["EnsemblGenomes-Gn:SJAG_01290","InterPro:IPR012946","InterPro:IPR004886","EnsemblGenomes-Tr:EEB06247","InterPro:IPR017853","UniProtKB/TrEMBL:B6K097","GOA:B6K097"],"deletion_viability":"unknown","disordered_region_coords":[{"range":{"end":517,"start":489}}],"feature_so_termid":"SO:0000704","feature_type":"mRNA gene","gene_neighbourhood":[{"uniquename":"SJAG_01284"},{"name":"rbd4","uniquename":"SJAG_01285"},{"name":"fcp1","uniquename":"SJAG_01286"},{"name":"rps3002","uniquename":"SJAG_01287"},{"name":"bgs3","uniquename":"SJAG_01288"},{"name":"gas1","uniquename":"SJAG_01290"},{"name":"ceo5","uniquename":"SJAG_01291"},{"name":"grx1","uniquename":"SJAG_01292"},{"name":"hit1","uniquename":"SJAG_05223"},{"name":"nup37","uniquename":"SJAG_01293"},{"name":"cox7","uniquename":"SJAG_05629"}],"genes_by_uniquename":{"SJAG_01290":null,"SPAC19B12.02c":null,"YMR307W":null},"has_protein_features":true,"interpro_matches":[{"dbname":"PFAM","description":"X8 domain","id":"PF07983","interpro_description":"X8 domain","interpro_id":"IPR012946","interpro_name":"X8","locations":[{"end":446,"start":375}],"match_end":446,"match_start":375,"name":"X8"},{"dbname":"PFAM","description":"Glucanosyltransferase","id":"PF03198","interpro_description":"Glucanosyltransferase","interpro_id":"IPR004886","interpro_name":"Glucanosyltransferase","locations":[{"end":327,"start":17}],"match_end":327,"match_start":17,"name":"Glyco_hydro_72"},{"dbname":"SMART","id":"SM00768","interpro_description":"X8 domain","interpro_id":"IPR012946","interpro_name":"X8","locations":[{"end":459,"start":374}],"match_end":459,"match_start":374,"name":"X8_cls"},{"dbname":"FUNFAM","description":"1,3-beta-glucanosyltransferase","id":"G3DSA:3.20.20.80:FF:000038","locations":[{"end":335,"start":16}],"match_end":335,"match_start":16},{"dbname":"SUPERFAMILY","id":"SSF51445","interpro_description":"Glycoside hydrolase superfamily","interpro_id":"IPR017853","interpro_name":"Glycoside_hydrolase_SF","locations":[{"end":325,"start":23}],"match_end":325,"match_start":23,"name":"(Trans)glycosidases"},{"dbname":"GENE3D","id":"G3DSA:3.20.20.80","locations":[{"end":334,"start":16}],"match_end":334,"match_start":16,"name":"Glycosidases"},{"dbname":"GENE3D","id":"G3DSA:1.20.58.1040","locations":[{"end":455,"start":348}],"match_end":455,"match_start":348},{"dbname":"PANTHER","id":"PTHR31468","interpro_description":"Glucanosyltransferase","interpro_id":"IPR004886","interpro_name":"Glucanosyltransferase","locations":[{"end":543,"start":3}],"match_end":543,"match_start":3,"name":"1,3-BETA-GLUCANOSYLTRANSFERASE GAS1"},{"dbname":"MOBIDB-Disorder","description":"consensus disorder prediction","id":"mobidb-lite-Disorder","locations":[{"end":517,"start":489}],"match_end":517,"match_start":489,"name":"disorder_prediction"}],"location":{"chromosome_name":"supercont5.3","end_pos":1328186,"start_pos":1326549,"strand":"forward"},"low_complexity_region_coords":[{"range":{"end":18,"start":6}},{"range":{"end":341,"start":327}},{"range":{"end":385,"start":372}},{"range":{"end":525,"start":485}}],"name":"gas1","ortholog_annotations":[{"gene_uniquename":"SJAG_01290","ortholog_taxonid":4896,"ortholog_uniquename":"SPAC19B12.02c","reference_uniquename":"PMID:21511999"},{"gene_uniquename":"SJAG_01290","ortholog_taxonid":4932,"ortholog_uniquename":"YMR307W","reference_uniquename":"PMID:29761456"},{"gene_uniquename":"SJAG_01290","ortholog_taxonid":4932,"ortholog_uniquename":"YMR307W","reference_uniquename":"PMID:26896847"}],"product":"cell wall 1,3-beta-glucanosyltransferase Gas1","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21511999":null,"PMID:26896847":null,"PMID:29761456":null,"PMID:36408920":null},"signal_peptide":{"assigned_by":"UniProtKB","evidence":"ECO:0000256","feature_type":"signal peptide","range":{"end":19,"start":1},"reference":null,"termid":"SO:0000418"},"split_by_parent_groups":{"molecular_function":{"not-binding":["GO:0042124"]}},"subset_termids":["GO:0009986","GO:0005886","GO:0005975","GO:0071554","GO:0042124","GO:0005618"],"taxonid":4897,"taxonomic_distribution":"other","terms_by_termid":{"GO:0009277":null,"GO:0009897":null,"GO:0031505":null,"GO:0032153":null,"GO:0035840":null,"GO:0035841":null,"GO:0042124":null,"GO:0071970":null,"SO:0000418":null},"tm_domain_coords":[{"assigned_by":"TMHMM","range":{"end":544,"start":522}}],"transcript_so_termid":"SO:0000234","transcripts":["SJAG_01290.1"],"transcripts_by_uniquename":{"SJAG_01290.1":null},"uniprot_identifier":"B6K097","uniquename":"SJAG_01290"}


