# terms

id: PR:O59673
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp14 gene.","definition_xrefs":["UniProtKB:O59673","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit H, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.10c","synonyms":[{"name":"Spom972h-atp14","type":"exact"}],"termid":"PR:O59673"}


id: GO:2000204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ribosomal large subunit export from nucleus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal subunit export from nucleus","termid":"GO:2000201"},{"relation_name":"is_a","term_name":"regulation of ribosomal large subunit export from nucleus","termid":"GO:2000203"},{"relation_name":"negatively_regulates","term_name":"ribosomal large subunit export from nucleus","termid":"GO:0000055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0042254"},{"rel_name":"negatively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0042254"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0042254","GO:0006913","GO:0044085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ribosomal large subunit export from nucleus","synonyms":[{"name":"negative regulation of 50S ribosomal subunit export from nucleus","type":"related"},{"name":"negative regulation of 60S ribosomal subunit export from nucleus","type":"related"},{"name":"negative regulation of ribosomal large subunit export from cell nucleus","type":"exact"},{"name":"negative regulation of ribosomal large subunit export out of nucleus","type":"exact"},{"name":"negative regulation of ribosomal large subunit transport from nucleus to cytoplasm","type":"exact"},{"name":"negative regulation of ribosomal large subunit-nucleus export","type":"exact"}],"termid":"GO:2000204"}


id: GO:0048078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in the compound eye.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of eye pigmentation","termid":"GO:0048075"},{"relation_name":"is_a","term_name":"regulation of compound eye pigmentation","termid":"GO:0048076"},{"relation_name":"positively_regulates","term_name":"compound eye pigmentation","termid":"GO:0048072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of compound eye pigmentation","synonyms":[{"name":"activation of eye pigmentation","type":"broad"},{"name":"positive regulation of eye pigmentation","type":"broad"},{"name":"stimulation of eye pigmentation","type":"broad"},{"name":"up regulation of eye pigmentation","type":"broad"},{"name":"up-regulation of eye pigmentation","type":"broad"},{"name":"upregulation of eye pigmentation","type":"broad"}],"termid":"GO:0048078"}


id: MONDO:0020772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete adolescent/adult-onset epilepsy syndrome (obsolete MONDO:0100030)","termid":"MONDO:0100030"},{"relation_name":"excluded_subClassOf","term_name":"juvenile absence epilepsy","termid":"MONDO:0800453"},{"relation_name":"is_a","term_name":"epilepsy, juvenile absence, susceptibility to","termid":"MONDO:1030001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, juvenile absence, susceptibility to, 1","secondary_identifiers":["DOID:0111324","MEDGEN:413426","UMLS:C2750892","OMIM:607631"],"synonyms":[{"name":"EJA1","type":"exact"},{"name":"EPILEPSY, JUVENILE ABSENCE, SUSCEPTIBILITY TO, 1","type":"exact"},{"name":"JAE1","type":"exact"},{"name":"epilepsy, juvenile absence, susceptibility to, type 1","type":"exact"},{"name":"susceptibility to juvenile absence epilepsy 1","type":"exact"}],"termid":"MONDO:0020772","xrefs":{"Monarch":{"xref_id":"0020772"}}}


id: MONDO:0020250
data:
  {"annotated_genes":["SJAG_02384","SJAG_02848","SJAG_02641","SJAG_02656"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008134"},{"annotations":[85800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008133"},{"annotations":[86008,86007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012543"},{"annotations":[86959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007429"}]},"cv_name":"mondo","definition":"An autosomal dominant hereditary condition characterized by optic atrophy and progressive visual loss.","definition_xrefs":["NCIT:C84577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"},{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02384":null,"SJAG_02641":null,"SJAG_02656":null,"SJAG_02848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant optic atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:2065009","UMLS:C4551508","GARD:11972","Orphanet:98672","MESH:D029241","MEDGEN:1647918"],"synonyms":[{"name":"ADOA","type":"exact"},{"name":"DOA","type":"exact"},{"name":"dominant optic atrophy","type":"related"},{"name":"optic atrophy, autosomal dominant","type":"exact"}],"termid":"MONDO:0020250","terms_by_termid":{"MONDO:0007429":null,"MONDO:0008133":null,"MONDO:0008134":null,"MONDO:0012543":null},"xrefs":{"Monarch":{"xref_id":"0020250"}}}


id: GO:0072575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population that contributes to the shaping of the liver.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"liver morphogenesis","termid":"GO:0072576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in liver morphogenesis","termid":"GO:0072575"}


id: GO:0048876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of the internal steady state of the amount of a chemical at the level of the retina.","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete chemical homeostasis within retina (obsolete GO:0048876)","termid":"GO:0048876"}


id: MONDO:0005798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal disease in human immunodeficiency virus (HIV)-infected patients. It is characterized by nephrotic syndrome, azotemia, normal to large kidneys on ultrasound images, and focal segmental glomerulosclerosis on renal biopsy findings.","definition_xrefs":["NCIT:C26918"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"excluded_subClassOf","term_name":"HIV infectious disease","termid":"MONDO:0005109"},{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"},{"relation_name":"is_a","term_name":"AIDS-related disorder","termid":"MONDO:0024571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005240"],"is_obsolete":false,"name":"HIV-associated nephropathy","secondary_identifiers":["MESH:D016263","MEDGEN:37145","EFO:0007313","UMLS:C0078911"],"synonyms":[{"name":"AIDS-associated nephropathy","type":"exact"},{"name":"AIDS-related nephropathy","type":"exact"},{"name":"HIV nephropathy","type":"exact"},{"name":"HIVAN","type":"exact"}],"termid":"MONDO:0005798","xrefs":{"Monarch":{"xref_id":"0005798"}}}


id: PBO:0067550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 700, pseudogene","termid":"PBO:0067550"}


id: MONDO:1010030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant high-grade glioma that occurs during childhood in the central nervous system.","definition_xrefs":["PMID:38496580","PMID:35456430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"malignant glioma","termid":"MONDO:0100342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric high-grade glioma","secondary_identifiers":["NCIT:C202298"],"synonyms":[{"name":"childhood malignant glioma","type":"exact"},{"name":"pHGG","type":"exact"}],"termid":"MONDO:1010030","xrefs":{"Monarch":{"xref_id":"1010030"}}}


id: PR:Q10264
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pso2 gene.","definition_xrefs":["UniProtKB:Q10264","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA cross-link repair protein pso2/snm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.01c","synonyms":[{"name":"Spom972h-pso2","type":"exact"}],"termid":"PR:Q10264"}


id: SO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The variable region of an immunoglobulin polypeptide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_region","termid":"SO:0001832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"V_region","synonyms":[{"name":"INSDC_feature:V_region","type":"exact"},{"name":"V region","type":"exact"}],"termid":"SO:0001833"}


id: GO:1902646
data:
  {"annotated_genes":["SJAG_02613","SJAG_00053","SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90736,104722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[117924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:di","PMID:22562153","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylinositol biosynthetic process","termid":"GO:0010511"},{"relation_name":"regulates","term_name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","termid":"GO:1902635"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_02613":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate anabolism","type":"exact"},{"name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthesis","type":"exact"},{"name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate formation","type":"exact"},{"name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate synthesis","type":"exact"}],"termid":"GO:1902646","terms_by_termid":{"GO:1902647":null,"GO:1902648":null}}


id: PBO:0048382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor family member 5B","termid":"PBO:0048382"}


id: PATO:0000634
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's involvement of only one part or side.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unilateral","termid":"PATO:0000634"}


id: GO:0072487
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone acetyltransferase complex that catalyzes the acetylation of a histone H4 lysine residue at position 16. In human, it contains the catalytic subunit MOF, and MSL1, MSL2 and MSL3.","definition_xrefs":["PMID:16227571","PMID:20018852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H4 histone acetyltransferase complex","termid":"GO:1902562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"MSL complex","termid":"GO:0072487"}


id: MONDO:0012256
data:
  {"annotated_genes":["SJAG_04506","SJAG_00199","SJAG_04292"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85515,85516,85517],"is_not":false,"summary":null,"term":"MONDO:0012256"}]},"cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 28 is a pure form of hereditary spastic paraplegia characterized by a childhood or adolescent onset of slowly progressive, pure crural muscle spastic paraparesis which manifests with mild lower limb weakness, gait difficulties, extensor plantar responses, and hyperreflexia of lower extremities. Less common manifestations reported include cerebellar oculomotor disturbance with saccadic eye pursuit, pes cavus and scoliosis. Some patients also present pin and vibration sensory loss in distal legs.","definition_xrefs":["Orphanet:101008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00199":null,"SJAG_04292":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 28","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1836295","SCTID:763376002","GARD:16941","MEDGEN:332174","MESH:C563732","OMIM:609340","DOID:0110779"],"synonyms":[{"name":"DDHD1 autosomal recessive pure spastic paraplegia","type":"exact"},{"name":"SPG28","type":"exact"},{"name":"autosomal recessive pure spastic paraplegia caused by mutation in DDHD1","type":"exact"},{"name":"autosomal recessive spastic paraplegia 28","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 28","type":"exact"},{"name":"hereditary spastic paraplegia 28","type":"exact"},{"name":"hereditary spastic paraplegia type 28","type":"exact"},{"name":"spastic paraplegia 28, autosomal recessive","type":"related"}],"termid":"MONDO:0012256","terms_by_termid":{"MONDO:0012256":null},"xrefs":{"Monarch":{"xref_id":"0012256"}}}


id: GO:0044630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the frequency, rate or extent of the lectin pathway of complement activation, in a different organism.","definition_xrefs":["GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of complement activation, lectin pathway in another organism (obsolete GO:0044630)","synonyms":[{"name":"modulation of complement activation, lectin pathway in other organism","type":"exact"},{"name":"regulation of complement activation, lectin pathway in other organism","type":"exact"}],"termid":"GO:0044630"}


id: MONDO:0957265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"congenital myopathy 22B, severe fetal","secondary_identifiers":["MEDGEN:1841137","DOID:0081355","OMIM:620369","UMLS:C5830501"],"termid":"MONDO:0957265","xrefs":{"Monarch":{"xref_id":"0957265"}}}


id: PBO:0004728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase subunit 3","termid":"PBO:0004728"}


id: MONDO:0001580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the lacrimal duct.","definition_xrefs":["NCIT:C3567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal system cancer","termid":"MONDO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"lacrimal duct cancer","secondary_identifiers":["DOID:12756","UMLS:C0153631","SCTID:188274004","MEDGEN:57795","ICD9:190.7","NCIT:C175319"],"synonyms":[{"name":"cancer of lacrimal drainage system","type":"exact"},{"name":"lacrimal drainage system cancer","type":"exact"},{"name":"malignant lacrimal drainage system neoplasm","type":"exact"},{"name":"malignant lacrimal duct neoplasm","type":"exact"},{"name":"malignant lacrimal duct tumor","type":"exact"},{"name":"malignant lacrimal duct tumour","type":"exact"},{"name":"malignant neoplasm of lacrimal drainage system","type":"exact"},{"name":"malignant neoplasm of lacrimal duct","type":"exact"},{"name":"malignant neoplasm of the lacrimal duct","type":"exact"},{"name":"malignant tumor of lacrimal duct","type":"exact"},{"name":"malignant tumor of the lacrimal duct","type":"exact"},{"name":"malignant tumour of lacrimal duct","type":"exact"},{"name":"malignant tumour of the lacrimal duct","type":"exact"}],"termid":"MONDO:0001580","xrefs":{"Monarch":{"xref_id":"0001580"}}}


id: MONDO:1012273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thrombopathia, non-human animal","termid":"MONDO:1011695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombopathia, dog","secondary_identifiers":["OMIA:001003-9615"],"termid":"MONDO:1012273","xrefs":{"Monarch":{"xref_id":"1012273"}}}


id: PBO:0062083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 14 pseudogene","termid":"PBO:0062083"}


id: GO:0043720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-keto-5-aminohexanoate + acetyl-CoA = L-3-aminobutyryl-CoA + acetoacetate.","definition_xrefs":["MetaCyc:R125-RXN","PMID:13064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"3-keto-5-aminohexanoate cleavage activity","secondary_identifiers":["RHEA:31555"],"synonyms":[{"name":"3-keto-5-aminohexanoate cleavage enzyme","type":"exact"}],"termid":"GO:0043720"}


id: PR:O94520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- emc4 gene.","definition_xrefs":["UniProtKB:O94520","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.03c","synonyms":[{"name":"Spom972h-emc4","type":"exact"}],"termid":"PR:O94520"}


id: PBO:0113533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein; required for efflux of amino acids during autophagic body breakdown in vacuole; targeted to vacuole via AP-3 pathway; null mutation causes gradual loss of viability during starvation","termid":"PBO:0113533"}


id: MOD:01270
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:14670044","PubMed:15549660","Unimod:271#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addition to cytopiloyne+H2O","termid":"MOD:00591"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addition to cytopiloyne+H2O - site S","synonyms":[{"name":"Cytopiloyne+water","type":"related"},{"name":"nucleophilic addition to cytopiloyne+H2O","type":"related"}],"termid":"MOD:01270"}


id: GO:0047361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphomannan(n) + GDP-mannose = phosphomannan(n+1) + GMP.","definition_xrefs":["EC:2.7.8.9","MetaCyc:2.7.8.9-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016780"],"is_obsolete":false,"name":"phosphomannan mannosephosphotransferase activity","synonyms":[{"name":"GDP-mannose:phosphomannan mannose phosphotransferase activity","type":"related"}],"termid":"GO:0047361"}


id: GO:1990703
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi medial membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:bhm","PMID:16038056","PMID:24119662"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of Golgi medial cisterna membrane (obsolete GO:1990703)","synonyms":[{"name":"integral component of medial-Golgi cisterna membrane","type":"exact"}],"termid":"GO:1990703"}


id: MONDO:0013595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperbiliverdinemia is a rare, genetic hepatic disease characterized by the presence of green coloration of the skin, urine, plasma and other body fluids (ascites, breastmilk) or parts (sclerae) due to increased serum levels of biliverdin in association with biliary obstruction and/or liver failure. Association with malnutrition, medication, and congenital biliary atresia has also been reported.","definition_xrefs":["Orphanet:276405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hyperbiliverdinemia","secondary_identifiers":["OMIM:614156","MEDGEN:481594","GARD:17279","UMLS:C3279964"],"synonyms":[{"name":"HBLVD","type":"related"},{"name":"green jaundice","type":"exact"},{"name":"hyperbiliverdinemia","type":"exact"}],"termid":"MONDO:0013595","xrefs":{"Monarch":{"xref_id":"0013595"}}}


id: PBO:0046871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM3 metabolism regulating signaling molecule B","termid":"PBO:0046871"}


id: PBO:0080357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 12 pseudogene","termid":"PBO:0080357"}


id: GO:1903994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of protein stabilization.","definition_xrefs":["PMID:18573880","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein stabilization (obsolete GO:1903994)","synonyms":[{"name":"activation of lysosomal protein stabilization","type":"narrow"},{"name":"activation of positive regulation of protein stability","type":"narrow"},{"name":"activation of protein sequestering","type":"related"},{"name":"activation of protein stabilization","type":"narrow"},{"name":"activation of protein stabilization activity","type":"related"},{"name":"positive regulation of lysosomal protein stabilization","type":"narrow"},{"name":"positive regulation of positive regulation of protein stability","type":"exact"},{"name":"positive regulation of protein sequestering","type":"related"},{"name":"positive regulation of protein stabilization","type":"exact"},{"name":"positive regulation of protein stabilization activity","type":"related"},{"name":"up regulation of lysosomal protein stabilization","type":"narrow"},{"name":"up regulation of positive regulation of protein stability","type":"exact"},{"name":"up regulation of protein sequestering","type":"related"},{"name":"up regulation of protein stabilization","type":"exact"},{"name":"up regulation of protein stabilization activity","type":"related"},{"name":"up-regulation of lysosomal protein stabilization","type":"narrow"},{"name":"up-regulation of positive regulation of protein stability","type":"exact"},{"name":"up-regulation of protein sequestering","type":"related"},{"name":"up-regulation of protein stabilization","type":"exact"},{"name":"up-regulation of protein stabilization activity","type":"related"},{"name":"upregulation of lysosomal protein stabilization","type":"narrow"},{"name":"upregulation of positive regulation of protein stability","type":"exact"},{"name":"upregulation of protein sequestering","type":"related"},{"name":"upregulation of protein stabilization","type":"exact"},{"name":"upregulation of protein stabilization activity","type":"related"}],"termid":"GO:1903994"}


id: MONDO:0017105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glioependymal/ependymal cyst is a rare central nervous system malformation defined as a subarachnoid, supratentorial, interventricular or intraspinal, sometimes intracerebral or intramedullar cyst with an internal ependymal lining, possibly surrounded by glial tissue. It may be an incidental finding or may present at different ages with clinical features depending on its size and location. It may distort adjacent brain structures and cause macrocephaly, ventriculomegaly, hydrocephalus, focal neurological signs and other signs and symptoms. In some cases, it is associated with other cerebral malformations (e.g. corpus callosum agenesis, polymicrogyria, heterotopias).","definition_xrefs":["Orphanet:269197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"glioependymal/ependymal cyst","secondary_identifiers":["GARD:20989"],"termid":"MONDO:0017105","xrefs":{"Monarch":{"xref_id":"0017105"}}}


id: PBO:0038638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA thioesterase 4","termid":"PBO:0038638"}


id: GO:0032981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form mitochondrial respiratory chain complex I.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NADH dehydrogenase complex assembly","termid":"GO:0010257"},{"relation_name":"is_a","term_name":"mitochondrial respiratory chain complex assembly","termid":"GO:0033108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0007005","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex I assembly","secondary_identifiers":["Reactome:R-HSA-6799198"],"synonyms":[{"name":"mitochondrial NADH dehydrogenase complex (ubiquinone) assembly","type":"exact"},{"name":"mitochondrial complex I assembly","type":"exact"}],"termid":"GO:0032981"}


id: GO:0061374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammillothalamic axonal tract, from its formation to the mature structure. The mammillothalamic tract is the collection of axons that connects the two major subdivisions of the diencephalon (hypothalamus and thalamus) and closes the diencephalic circuit.","definition_xrefs":["GOC:dph","GOC:yaf","PMID:10662642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammillary axonal complex development","termid":"GO:0061373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillothalamic axonal tract development","termid":"GO:0061374"}


id: PBO:0003778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA R39b (predicted)","termid":"PBO:0003778"}


id: PR:Q10451
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 5, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.01","synonyms":[{"name":"Spom972h-ppr5","type":"exact"}],"termid":"PR:Q10451"}


id: PBO:0043868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CGRP receptor component","termid":"PBO:0043868"}


id: FYPO:0005092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that has a greater length, diameter, and volume than normal, is shaped in the form of a pear, and undergoes two or more rounds of cell division and then dies. In a pear-shaped cell, one end is rounded, while the other resembles an end of a normal rod-shaped cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen pear-shaped vegetative cell","termid":"FYPO:0004965"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, swollen, elongated cell","termid":"FYPO:0007140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000004","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, swollen, elongated pear-shaped cell","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, swollen, elongated pear-shaped cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, swollen, elongated pear-shaped cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, swollen, elongated pear-shaped cell","type":"exact"}],"termid":"FYPO:0005092"}


id: GO:0035667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a toll-like 4 receptor where the TRIF adaptor mediates transduction of the signal. Toll-like 4 receptors are pattern recognition receptors that bind bacterial lipopolysaccharide (LPS) to initiate an innate immune response.","definition_xrefs":["PMID:18641322","GOC:BHF","PMID:20511708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"},{"relation_name":"is_a","term_name":"TRIF-dependent toll-like receptor signaling pathway","termid":"GO:0035666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"TRIF-dependent toll-like receptor 4 signaling pathway","synonyms":[{"name":"TRIF-dependent TLR4 signaling pathway","type":"exact"},{"name":"TRIF-dependent toll-like receptor 4 signalling pathway","type":"exact"},{"name":"Toll/IL-1 receptor (TIR) domain-containing adaptor-dependent TLR4 signaling pathway","type":"exact"}],"termid":"GO:0035667"}


id: MONDO:0018681
data:
  {"annotated_genes":["SJAG_04825"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014700"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04825":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0700092","MONDO:0005497"],"is_obsolete":false,"name":"neurodevelopmental disorder-craniofacial dysmorphism-cardiac defect-hip dysplasia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17785","Orphanet:453499"],"synonyms":[{"name":"neurodevelopmental disorder-craniofacial dysmorphism-cardiac defect-hip dysplasia syndrome","type":"exact"}],"termid":"MONDO:0018681","terms_by_termid":{"MONDO:0014700":null},"xrefs":{"Monarch":{"xref_id":"0018681"}}}


id: PBO:0054902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2316","termid":"PBO:0054902"}


id: PBO:0085948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant displays elevated frequency of mitochondrial genome loss","termid":"PBO:0085948"}


id: GO:0044858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The clustering and aggregation of a plasma membrane into domains. This serves as a mechanism to compartmentalize cellular activities and to establish cell polarity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane raft polarization","termid":"GO:0001766"},{"relation_name":"is_a","term_name":"plasma membrane raft distribution","termid":"GO:0044855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"plasma membrane raft polarization","synonyms":[{"name":"plasma membrane polarization","type":"exact"}],"termid":"GO:0044858"}


id: PBO:0042664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 20","termid":"PBO:0042664"}


id: GO:0019731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response against bacteria mediated through a body fluid. Examples of this process are the antibacterial humoral responses in Mus musculus and Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial humoral response","termid":"GO:0019730"},{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antibacterial humoral response","secondary_identifiers":["GO:0019733","GO:0006961"],"termid":"GO:0019731"}


id: FYPO:0002744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more amino acid transport RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Amino acid transport RNAs are transcribed from genes whose products are involved in amino acid transport.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of transport gene mRNA during vegetative growth","termid":"FYPO:0004490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased level of amino acid transport gene mRNA during vegetative growth","synonyms":[{"name":"increased amino acid transport gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of amino acid transport gene RNA during vegetative growth","type":"exact"},{"name":"increased level of amino acid transport gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of amino acid transport gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0002744"}


id: GO:0048647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individuals that have the potential to develop any of several possible distinct developmental paths have their individual developmental fates determined in response to environmental and/or genetic cues.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyphenic determination","termid":"GO:0048647"}


id: PBO:0073671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal regulatory protein alpha pseudogene 1","termid":"PBO:0073671"}


id: PBO:0066900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 200","termid":"PBO:0066900"}


id: MONDO:0021971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Baraitser Rodeck garner syndrome (obsolete MONDO:0021971)","termid":"MONDO:0021971","xrefs":{"Monarch":{"xref_id":"0021971"}}}


id: PBO:0066887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 187","termid":"PBO:0066887"}


id: MONDO:0034962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare ophthalmic disorder with cortical involvement (obsolete MONDO:0034962)","secondary_identifiers":["Orphanet:519343"],"termid":"MONDO:0034962","xrefs":{"Monarch":{"xref_id":"0034962"}}}


id: PBO:0005524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp5","termid":"PBO:0005524"}


id: PBO:0070794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 24","termid":"PBO:0070794"}


id: GO:1901463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tetrapyrrole biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"regulates","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"regulation of tetrapyrrole biosynthetic process","synonyms":[{"name":"regulation of tetrapyrrole anabolism","type":"exact"},{"name":"regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"regulation of tetrapyrrole formation","type":"exact"},{"name":"regulation of tetrapyrrole synthesis","type":"exact"}],"termid":"GO:1901463"}


id: FYPO:0006631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to chromatin","synonyms":[{"name":"decreased protein localisation to chromatin","type":"exact"},{"name":"reduced protein localization to chromatin","type":"exact"}],"termid":"FYPO:0006631"}


id: MONDO:0007361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"classic complement early component deficiency","termid":"MONDO:0000015"},{"relation_name":"is_a","term_name":"serpinopathy","termid":"MONDO:0027749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"C1 inhibitor deficiency","secondary_identifiers":["NANDO:1200365","Orphanet:459353","UMLS:C1852700","NANDO:2200795","DOID:0060002","MEDGEN:343867","OMIM:120790"],"synonyms":[{"name":"Quincke oedema","type":"related"},{"name":"complement component 4, partial deficiency OF","type":"related"}],"termid":"MONDO:0007361","xrefs":{"Monarch":{"xref_id":"0007361"}}}


id: PBO:0003848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin-containing T-complex gamma subunit Cct3","termid":"PBO:0003848"}


id: PBO:0013777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mst2/NuA4 histone acetyltransferase complex subunit Eaf6","termid":"PBO:0013777"}


id: PBO:0067859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 161","termid":"PBO:0067859"}


id: PBO:0087157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA lariat debranching enzyme; catalyzes debranching of lariat introns formed during pre-mRNA splicing; required for efficient Ty1 transposition; knockdown of human homolog Dbr1 rescues toxicity of RNA-binding proteins TDP-43 and FUS which are implicated in amyotrophic lateral sclerosis (ALS), suggests potential therapeutic target for ALS and related TDP-43 proteinopathies; human homolog DBR1 can complement yeast dbr1 null mutant","termid":"PBO:0087157"}


id: PBO:0073236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenophosphate synthetase 1","termid":"PBO:0073236"}


id: GO:0043052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to a temperature gradient. Movement may be towards either a higher or lower temperature.","definition_xrefs":["GOC:cab1","WB_REF:cgc467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"},{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermotaxis","secondary_identifiers":["Wikipedia:Thermotaxis"],"synonyms":[{"name":"taxis in response to temperature stimulus","type":"exact"}],"termid":"GO:0043052"}


id: PBO:0082093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconate dehydrogenase (decarboxylating); catalyzes an NADPH regenerating reaction in the pentose phosphate pathway; required for growth on D-glucono-delta-lactone and adaptation to oxidative stress; GND1 has a paralog, GND2, that arose from the whole genome duplication","termid":"PBO:0082093"}


id: PBO:0038728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 23","termid":"PBO:0038728"}


id: MONDO:0014789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"},{"relation_name":"is_a","term_name":"disorder of multiple glycosylation","termid":"MONDO:0017749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"CCDC115-CDG","secondary_identifiers":["MEDGEN:906792","GARD:17845","DOID:0070267","OMIM:616828","Orphanet:468684","UMLS:C4225191"],"synonyms":[{"name":"CDG IIo","type":"related"},{"name":"CDG syndrome type IIo","type":"exact"},{"name":"CDG-IIo","type":"exact"},{"name":"CDG2O","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IIo","type":"exact"},{"name":"congenital disorder of glycosylation type 2o","type":"exact"},{"name":"congenital disorder of glycosylation type IIo","type":"exact"},{"name":"congenital disorder of glycosylation, type IIo","type":"exact"}],"termid":"MONDO:0014789","xrefs":{"Monarch":{"xref_id":"0014789"}}}


id: PBO:0077239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 1","termid":"PBO:0077239"}


id: PBO:0073192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein V","termid":"PBO:0073192"}


id: PBO:0072493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 22","termid":"PBO:0072493"}


id: GO:0052168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of the host calcium-dependent protein kinase signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of defense-related host calcium-dependent protein kinase pathway (obsolete GO:0052168)","synonyms":[{"name":"modulation by organism of defense-related calcium-dependent protein kinase pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by organism of defense-related host CDPK pathway","type":"exact"}],"termid":"GO:0052168"}


id: GO:0071476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hypotonic environment, i.e. an environment with a lower concentration of solutes than the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotonic response","termid":"GO:0006971"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hypotonic response","synonyms":[{"name":"cellular hypo-osmotic response","type":"exact"}],"termid":"GO:0071476"}


id: PATO:0001709
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A size quality inhering in an bearer by virtue of the bearer's extension in two dimensions.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-D extent","synonyms":[{"name":"2-D size","type":"exact"}],"termid":"PATO:0001709"}


id: GO:0004055
data:
  {"annotated_genes":["SJAG_04577"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70911],"is_not":false,"summary":null,"term":"GO:0004055"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-citrulline + L-aspartate = AMP + diphosphate + (N(omega)-L-arginino)succinate.","definition_xrefs":["EC:6.3.4.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"argininosuccinate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:10932","MetaCyc:ARGSUCCINSYN-RXN","Reactome:R-HSA-70577"],"synonyms":[{"name":"L-citrulline:L-aspartate ligase (AMP-forming)","type":"related"},{"name":"arginine succinate synthetase activity","type":"related"},{"name":"argininosuccinate synthetase activity","type":"related"},{"name":"argininosuccinic acid synthetase activity","type":"related"},{"name":"arginosuccinate synthetase activity","type":"related"},{"name":"citrulline--aspartate ligase activity","type":"related"}],"termid":"GO:0004055","terms_by_termid":{"GO:0004055":null}}


id: PR:O13453
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmp1 gene.","definition_xrefs":["UniProtKB:O13453","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase pmp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.01","synonyms":[{"name":"Spom972h-pmp1","type":"exact"}],"termid":"PR:O13453"}


id: MONDO:0017816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary systemic amyloidosis (PSA) is a form of AL amyloidosis caused by the aggregation and deposition of insoluble amyloid fibrils derived from misfolded monoclonal immunoglobulin light chains usually produced by a plasma cell tumor and characterized by multiple organ involvement.","definition_xrefs":["Orphanet:314701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AL amyloidosis","termid":"MONDO:0019438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"primary systemic amyloidosis","secondary_identifiers":["SCTID:89449005","GARD:17431","NANDO:1200209","MEDGEN:129028","NCIT:C8299","UMLS:C0281479"],"synonyms":[{"name":"systemic AL amyloidosis","type":"exact"},{"name":"systemic Immunoglobulin Light chain amyloidosis","type":"exact"},{"name":"systemic amyloidosis","type":"exact"}],"termid":"MONDO:0017816","xrefs":{"Monarch":{"xref_id":"0017816"}}}


id: PBO:0071051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 53","termid":"PBO:0071051"}


id: PBO:0074345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 4","termid":"PBO:0074345"}


id: PBO:0085895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; localizes to membrane fraction; YCL049C is not an essential gene","termid":"PBO:0085895"}


id: PBO:0085533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S30, no bacterial homolog; RPS30B has a paralog, RPS30A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0085533"}


id: PBO:0062608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily R member 3 pseudogene","termid":"PBO:0062608"}


id: MONDO:0020713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary venoocclusive disease","termid":"MONDO:0009937"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary venoocclusive disease 1","secondary_identifiers":["OMIM:265450","DOID:0081268","MEDGEN:854500","UMLS:C3887658"],"synonyms":[{"name":"PVOD1","type":"exact"},{"name":"pulmonary venoocclusive disease 1, autosomal dominant","type":"related"}],"termid":"MONDO:0020713","xrefs":{"Monarch":{"xref_id":"0020713"}}}


id: MONDO:0014204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral striopallidodentate calcinosis","termid":"MONDO:0008947"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"basal ganglia calcification, idiopathic, 5","secondary_identifiers":["MEDGEN:815975","GARD:15973","OMIM:615483","UMLS:C3809645"],"synonyms":[{"name":"IBGC5","type":"related"},{"name":"basal ganglia calcification, idiopathic, 5","type":"exact"},{"name":"basal ganglia calcification, idiopathic, type 5","type":"exact"}],"termid":"MONDO:0014204","xrefs":{"Monarch":{"xref_id":"0014204"}}}


id: MONDO:0001258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"vertebral column disorder","termid":"MONDO:0000812"},{"relation_name":"is_a","term_name":"occlusion precerebral artery","termid":"MONDO:0003718"},{"relation_name":"is_a","term_name":"arterial occlusion","termid":"MONDO:0020673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebral artery occlusion","secondary_identifiers":["ICD9:433.2","ICD9:433.20","MEDGEN:539080","ICD10CM:I65.0","ICD9:433.21","SCTID:195182007","UMLS:C0265104","DOID:11299"],"synonyms":[{"name":"occlusion and stenosis of vertebral artery","type":"exact"},{"name":"vertebral artery occlusion","type":"exact"},{"name":"vertebrobasial artery occlusion","type":"related"}],"termid":"MONDO:0001258","xrefs":{"Monarch":{"xref_id":"0001258"}}}


id: MONDO:0018016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classic endocrine tumor of the appendix is a type of endocrine tumor of the appendix, seen twice as frequently in females than in males, and usually presenting before the fifth decade of life. Classic endocrine tumor of the appendix is usually asymptomatic when located in the tip of the appendix (without obstruction), but acute appendicitis is often associated.","definition_xrefs":["Orphanet:329977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine tumor of the appendix, well differentiated, low or intermediate grade","termid":"MONDO:0015066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"classic neuroendocrine tumor of appendix","secondary_identifiers":["UMLS:C5679854","GARD:21500","MEDGEN:1843245"],"synonyms":[{"name":"classic appendiceal neuroendocrine tumor","type":"exact"},{"name":"classic appendiceal neuroendocrine tumour","type":"exact"},{"name":"classic appendix neuroendocrine tumor","type":"exact"},{"name":"classic appendix neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0018016","xrefs":{"Monarch":{"xref_id":"0018016"}}}


id: MONDO:0044996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the cerebral cortex.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral cortex disorder","secondary_identifiers":["UMLS:C1263847","MEDGEN:688117","SCTID:128128003"],"synonyms":[{"name":"cerebral cortex disease","type":"exact"},{"name":"cerebral cortex disease or disorder","type":"exact"},{"name":"disease of cerebral cortex","type":"exact"},{"name":"disease or disorder of cerebral cortex","type":"exact"},{"name":"disorder of cerebral cortex","type":"exact"}],"termid":"MONDO:0044996","xrefs":{"Monarch":{"xref_id":"0044996"}}}


id: PBO:0086117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for degradation of unstable forms of cytochrome c; located in the mitochondria","termid":"PBO:0086117"}


id: PBO:0039792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARAF pseudogene 3","termid":"PBO:0039792"}


id: PBO:0004901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase Pek1","termid":"PBO:0004901"}


id: GO:0002369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a T cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production involved in immune response","termid":"GO:0002367"},{"relation_name":"is_a","term_name":"T cell mediated immunity","termid":"GO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"T cell cytokine production","synonyms":[{"name":"T lymphocyte cytokine production","type":"exact"},{"name":"T-cell cytokine production","type":"exact"},{"name":"T-lymphocyte cytokine production","type":"exact"}],"termid":"GO:0002369"}


id: PBO:0067154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 204, pseudogene","termid":"PBO:0067154"}


id: PBO:0053385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 312","termid":"PBO:0053385"}


id: PBO:0087703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme","termid":"PBO:0087703"}


id: PBO:0047778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D1","termid":"PBO:0047778"}


id: PBO:0113314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in recycling of membrane transporters from endosome to plasma membrane; plays a role in the multivesicular body sorting pathway; functions and forms a complex with Did2p; recruitment to endosomes is mediated by the Vps2p-Vps24p subcomplex of ESCRT-III; also interacts with Vps4p","termid":"PBO:0113314"}


id: PBO:0061615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 1","termid":"PBO:0061615"}


id: PBO:0072712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 4 pseudogene 1","termid":"PBO:0072712"}


id: PBO:0091261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A)-bearing, not reproduced","termid":"PBO:0091261"}


id: PATO:0001715
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A diameter which is relatively small.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased length","termid":"PATO:0000574"},{"relation_name":"is_a","term_name":"diameter","termid":"PATO:0001334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased diameter","termid":"PATO:0001715"}


id: PBO:0048728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycolipid transfer protein domain containing 2","termid":"PBO:0048728"}


id: GO:0070965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the directed killing of a fungal cell by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of fungus","termid":"GO:0070953"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070961"},{"relation_name":"positively_regulates","term_name":"neutrophil-mediated killing of fungus","termid":"GO:0070947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil mediated killing of fungus","synonyms":[{"name":"activation of neutrophil mediated killing of fungus","type":"narrow"},{"name":"stimulation of neutrophil mediated killing of fungus","type":"narrow"},{"name":"up regulation of neutrophil mediated killing of fungus","type":"exact"},{"name":"up-regulation of neutrophil mediated killing of fungus","type":"exact"},{"name":"upregulation of neutrophil mediated killing of fungus","type":"exact"}],"termid":"GO:0070965"}


id: PBO:0054115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1480","termid":"PBO:0054115"}


id: GO:0045100
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A type of intermediate filament.","definition_xrefs":["ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete desmin (obsolete GO:0045100)","synonyms":[{"name":"desmin","type":"exact"}],"termid":"GO:0045100"}


id: PATO:0000528
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000528 drug insensitive (obsolete PATO:0000528)","termid":"PATO:0000528"}


id: GO:0034177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 12 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 12 signaling pathway","termid":"GO:0034175"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 12 signaling pathway","termid":"GO:0034174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 12 signaling pathway","synonyms":[{"name":"positive regulation of TLR12 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 12 signalling pathway","type":"exact"}],"termid":"GO:0034177"}


id: GO:0009311
data:
  {"annotated_genes":["SJAG_04859","SJAG_00129","SJAG_04301","SJAG_03824","SJAG_01646","SJAG_01427","SJAG_01862","SJAG_00182","SJAG_04363","SJAG_02131","SJAG_01209","SJAG_01531","SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68298],"is_not":false,"summary":null,"term":"GO:0009311"},{"annotations":[101939,101938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000025"},{"annotations":[68316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005995"},{"annotations":[77163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005987"},{"annotations":[68349,64604,61951,68836,69515,62671,109269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005992"},{"annotations":[71960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005993"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01209":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null,"SJAG_02131":null,"SJAG_02949":null,"SJAG_03824":null,"SJAG_04301":null,"SJAG_04363":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"oligosaccharide metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0051690"],"synonyms":[{"name":"multicellular organismal oligosaccharide metabolic process","type":"narrow"},{"name":"oligosaccharide metabolism","type":"exact"}],"termid":"GO:0009311","terms_by_termid":{"GO:0000025":null,"GO:0005987":null,"GO:0005992":null,"GO:0005993":null,"GO:0005995":null,"GO:0009311":null}}


id: MONDO:0850197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma that is characterized as a molecular subtype by activation of the sonic hedgehog (SHH) pathway and TP53 mutations that may be present or absent.","definition_xrefs":["DOID:0080703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma SHH activated","secondary_identifiers":["MEDGEN:1375478","UMLS:C4330671","NCIT:C129441"],"termid":"MONDO:0850197","xrefs":{"Monarch":{"xref_id":"0850197"}}}


id: PBO:0086464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative methyltransferase; may interact with ribosomes, based on co-purification experiments; predicted to be involved in ribosome biogenesis; null mutant is resistant to fluconazole; GFP-fusion protein localizes to the nucleolus; YGR283C has a paralog, YMR310C, that arose from the whole genome duplication","termid":"PBO:0086464"}


id: PBO:0059498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"msh homeobox 1","termid":"PBO:0059498"}


id: PBO:0035946
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_histone_H2B-K119_ubiquitination_at_double-strand_break_site_during_vegetative_growth","termid":"PBO:0035946"}


id: GO:0034383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a low-density lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"low-density lipoprotein particle clearance","secondary_identifiers":["Reactome:R-HSA-8964038"],"synonyms":[{"name":"LDL clearance","type":"exact"}],"termid":"GO:0034383"}


id: GO:0102936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + gypsogenate = gypsogenate-28-beta-D-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gypsogenate-UDP-glucosyltransferase activity (obsolete GO:0102936)","termid":"GO:0102936"}


id: GO:0048694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of collateral sprouting of an injured axon.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:lm","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of collateral sprouting","termid":"GO:0048672"},{"relation_name":"is_a","term_name":"positive regulation of sprouting of injured axon","termid":"GO:0048687"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting of injured axon","termid":"GO:0048693"},{"relation_name":"positively_regulates","term_name":"collateral sprouting of injured axon","termid":"GO:0048674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collateral sprouting of injured axon","synonyms":[{"name":"activation of collateral sprouting of injured axon","type":"narrow"},{"name":"stimulation of collateral sprouting of injured axon","type":"narrow"},{"name":"up regulation of collateral sprouting of injured axon","type":"exact"},{"name":"up-regulation of collateral sprouting of injured axon","type":"exact"},{"name":"upregulation of collateral sprouting of injured axon","type":"exact"}],"termid":"GO:0048694"}


id: MONDO:0000742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete persistent generalized lymphadenopathy (obsolete MONDO:0000742)","secondary_identifiers":["SCTID:95892003","DOID:0060314"],"synonyms":[{"name":"PGL","type":"exact"}],"termid":"MONDO:0000742","xrefs":{"Monarch":{"xref_id":"0000742"}}}


id: MONDO:0018659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 19","termid":"MONDO:0016937"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 19","secondary_identifiers":["GARD:21876","MEDGEN:1380854","UMLS:C4518508","Orphanet:447985"],"synonyms":[{"name":"partial duplication of chromosome 19p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 19","type":"exact"},{"name":"partial trisomy of chromosome 19p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 19","type":"exact"}],"termid":"MONDO:0018659","xrefs":{"Monarch":{"xref_id":"0018659"}}}


id: PBO:0071173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 14","termid":"PBO:0071173"}


id: GO:1904504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lipophagy.","definition_xrefs":["PMID:25383539","GOC:dph","GO_REF:0000058","GOC:TermGenie","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"regulation of lipophagy","termid":"GO:1904502"},{"relation_name":"positively_regulates","term_name":"lipophagy","termid":"GO:0061724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipophagy","synonyms":[{"name":"activation of lipophagy","type":"narrow"},{"name":"up regulation of lipophagy","type":"exact"},{"name":"up-regulation of lipophagy","type":"exact"},{"name":"upregulation of lipophagy","type":"exact"}],"termid":"GO:1904504"}


id: PBO:0083991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutathione-dependent oxidoreductase; mitochondrial matrix protein involved at an early step in the biogenesis of iron-sulfur centers along with Bol1p; hydroperoxide and superoxide-radical responsive; monothiol glutaredoxin subfamily member along with Grx3p and Grx4p","termid":"PBO:0083991"}


id: PR:Q12381
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-processing factor 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03357","PRO:DNx","PANTHER:PTHR11246:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor prp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.07","secondary_identifiers":["UniProtKB:Q12381"],"synonyms":[{"name":"Spom972h-PRPF6","type":"exact"}],"termid":"PR:Q12381"}


id: PBO:0012543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-acts_on_population_of","termid":"PBO:0012543"}


id: PR:O74556
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC970.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannan endo-1,6-alpha-mannosidase C970.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.02","synonyms":[{"name":"Spom972h-SPCC970.02","type":"exact"},{"name":"endo-alpha-1->6-D-mannanase C970.02 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74556"}


id: PBO:0034688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034688"}


id: FYPO:0007203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at an rDNA spacer replication fork barrier by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:18794373","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-stranded DNA binding","termid":"FYPO:0005018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000653","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased rDNA spacer replication fork barrier binding","synonyms":[{"name":"decreased DNA binding at rDNA spacer replication fork barrier","type":"exact"},{"name":"reduced rDNA spacer replication fork barrier binding","type":"exact"}],"termid":"FYPO:0007203"}


id: MOD:01377
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to a (2S,3R,4S)-4-hydroxyisoleucine.","definition_xrefs":["ChEBI:141844","PubMed:363352","RESID:AA0448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated isoleucine","termid":"MOD:01415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3R,4S)-4-hydroxyisoleucine","synonyms":[{"name":"(2S,3R,4S)-2-amino-3-methyl-4-hydroxyvaleric acid","type":"exact"},{"name":"(2S,3R,4S)-2-amino-4-hydroxy-3-methylpentanoic acid","type":"exact"},{"name":"(2S,3R,4S)-4-hydroxyisoleucine","type":"exact"},{"name":"(3R,4S)-4-hydroxyisoleucine","type":"exact"},{"name":"MOD_RES (3R,4S)-4-hydroxyisoleucine","type":"exact"},{"name":"gamma-hydroxyisoleucine","type":"exact"}],"termid":"MOD:01377"}


id: FYPO:0004730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the lateral cell cortex is observed there. The lateral cell cortex is the region directly beneath the plasma membrane of the lateral portion of the cell.","definition_xrefs":["GO:0097575","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"output_of","term_name":"abnormal protein localization to lateral cell cortex","termid":"FYPO:0007869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to lateral cell cortex","synonyms":[{"name":"ectopic protein localization to lateral cell cortex","type":"exact"},{"name":"protein mislocalised to lateral cell cortex","type":"exact"},{"name":"protein mislocalised to lateral cell cortex during vegetative growth","type":"exact"},{"name":"protein mislocalized to cell side during vegetative growth","type":"related"},{"name":"protein mislocalized to lateral cell cortex during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to lateral cell cortex during vegetative growth","type":"exact"},{"name":"protein mislocalized to lateral cortex","type":"exact"}],"termid":"FYPO:0004730"}


id: GO:0018968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tetrahydrofuran, a cyclic 4 carbon ether. It is one of the most polar ethers and is a widely used solvent for polar reagents. Since THF is very soluble in water and has a relatively low boiling point, significant amounts are often released into the environment, causing contamination problems.","definition_xrefs":["PMID:35108100","PMID:33362743","PMID:12632259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tetrahydrofuran catabolic process","secondary_identifiers":["UM-BBD_pathwayID:thf"],"synonyms":[{"name":"THF metabolic process","type":"broad"},{"name":"THF metabolism","type":"broad"},{"name":"tetrahydrofuran metabolic process","type":"broad"},{"name":"tetrahydrofuran metabolism","type":"broad"}],"termid":"GO:0018968"}


id: PBO:0086579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion mutant exhibits synthetic phenotype with alpha-synuclein","termid":"PBO:0086579"}


id: PBO:0055155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2574","termid":"PBO:0055155"}


id: PBO:0048092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 13","termid":"PBO:0048092"}


id: MONDO:0003853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the major vestibular gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"bartholin gland carcinoma","termid":"MONDO:0002829"},{"relation_name":"is_a","term_name":"vulvar adenocarcinoma","termid":"MONDO:0024336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Bartholin gland adenocarcinoma","secondary_identifiers":["NCIT:C7719","DOID:6316","MEDGEN:116035","UMLS:C0238016"],"synonyms":[{"name":"Bartholin gland adenocarcinoma","type":"exact"},{"name":"adenocarcinoma of Bartholin's gland","type":"related"},{"name":"adenocarcinoma of the Bartholin's gland","type":"exact"},{"name":"major vestibular gland adenocarcinoma","type":"exact"}],"termid":"MONDO:0003853","xrefs":{"Monarch":{"xref_id":"0003853"}}}


id: GO:0023025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class Ib major histocompatibility complex.","definition_xrefs":["GOC:mtg_signal","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex binding","termid":"GO:0023023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MHC class Ib protein complex binding","termid":"GO:0023025"}


id: PBO:0078044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 34","termid":"PBO:0078044"}


id: GO:1990617
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric transcription factor complex that is composed of CHOP (C/EBP homology protein, GADD153) and ATF4 (activating transcription factor 4, also known as cAMP response element binding protein-2/CREB-2) subunits.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:18940792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CHOP-ATF4 complex","synonyms":[{"name":"ATF4-CHOP heterodimer","type":"exact"},{"name":"CHOP-ATF4 heterodimer","type":"exact"},{"name":"CHOP-CREB-2 complex","type":"exact"},{"name":"CHOP/ATF4 complex","type":"exact"},{"name":"GADD153-ATF4 complex","type":"exact"}],"termid":"GO:1990617"}


id: MONDO:0002658
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the iris.","direct_ancestors":[{"relation_name":"is_a","term_name":"uveal cancer","termid":"MONDO:0002659"},{"relation_name":"is_a","term_name":"iris neoplasm","termid":"MONDO:0021224"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"iris cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:91103","SCTID:188264002","UMLS:C0346372","DOID:3478","NCIT:C4554"],"synonyms":[{"name":"cancer of iris","type":"exact"},{"name":"iris cancer","type":"exact"},{"name":"malignant iris neoplasm","type":"exact"},{"name":"malignant iris tumor","type":"exact"},{"name":"malignant iris tumour","type":"exact"},{"name":"malignant neoplasm of iris","type":"exact"},{"name":"malignant neoplasm of the iris","type":"exact"},{"name":"malignant tumor of iris","type":"exact"},{"name":"malignant tumor of the iris","type":"exact"},{"name":"malignant tumour of iris","type":"exact"},{"name":"malignant tumour of the iris","type":"exact"},{"name":"tumor of the iris","type":"broad"},{"name":"tumour of the iris","type":"broad"}],"termid":"MONDO:0002658","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0002658"}}}


id: MONDO:0002803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intestinal pseudo-obstruction is a digestive disorder in whichthe intestinal walls are unable to contract normally (called hypomotility); the conditionresembles a true obstruction, but no actual blockage exists. Signs and symptoms may include abdominal pain; vomiting; diarrhea; constipation; malabsorption of nutrients leading to weight loss and/or failure to thrive ; and other symptoms. It may be classified as neuropathic (from lack of nerve function)or myopathic (from lack of muscle function), depending on the source of the abnormality. The condition is sometimes inherited (in an X-linked recessive or autosomal dominant manner)and may be caused by mutations in the FLNA gene; it may also be acquired after certain illnesses. The goal of treatment is to provide relief from symptoms andensure that nutritional support is adequate.","direct_ancestors":[{"relation_name":"is_a","term_name":"ileus","termid":"MONDO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal pseudo-obstruction","secondary_identifiers":["DOID:3878","NCIT:C34733","SCTID:235825006","UMLS:C0021847","MEDGEN:5864","GARD:6789","ICD9:569.89","MESH:D007418"],"synonyms":[{"name":"Chronic intestinal pseudo-obstruction.","type":"exact"},{"name":"hollow visceral myopathy","type":"related"},{"name":"intestinal pseudo-obstruction","type":"exact"},{"name":"intestinal pseudoobstruction","type":"related"},{"name":"intestine pseudoobstruction","type":"exact"},{"name":"pseudo-obstruction of intestine","type":"exact"}],"termid":"MONDO:0002803","xrefs":{"Monarch":{"xref_id":"0002803"}}}


id: PBO:0034110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_starts_at_point","termid":"PBO:0034110"}


id: PBO:0059949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 35","termid":"PBO:0059949"}


id: GO:0031390
data:
  {"annotated_genes":["SJAG_00272","SJAG_00729","SJAG_02182","SJAG_02373","SJAG_01010","SJAG_02610","SJAG_00806"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[62877,70624,72962,77500,78024,94285,113120],"is_not":false,"summary":null,"term":"GO:0031390"}]},"cv_name":"cellular_component","definition":"A heptameric complex related to replication factor C, which loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA and plays a vital role in chromosome cohesion. In Saccharomyces the subunits are known as Ctf18p, Rfc2p, Rfc3p, Rfc4p, Rfc5p, Dcc1p, and Ctf8p.","definition_xrefs":["PMID:14614842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00806":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_02373":null,"SJAG_02610":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"Ctf18 RFC-like complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Ctf18-RFC","type":"exact"},{"name":"Ctf18-RLC","type":"exact"},{"name":"RFC (Ctf18)","type":"exact"}],"termid":"GO:0031390","terms_by_termid":{"GO:0031390":null}}


id: GO:0009466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class I cytochrome c (obsolete GO:0009466)","synonyms":[{"name":"class I cytochrome c","type":"exact"}],"termid":"GO:0009466"}


id: MONDO:0700020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 13 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 13 disorder","termid":"MONDO:0700020","xrefs":{"Monarch":{"xref_id":"0700020"}}}


id: PBO:0065625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 3","termid":"PBO:0065625"}


id: MONDO:0000033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete frontonasal dysplasia (obsolete MONDO:0000033)","termid":"MONDO:0000033","xrefs":{"Monarch":{"xref_id":"0000033"}}}


id: GO:0102307
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: erythromycin C + S-adenosyl-L-methionine = erythromycin A + H+ + S-adenosyl-L-homocysteine. Also converts erythromycin D into erythromycin B.","definition_xrefs":["EC:2.1.1.254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"erythromycin 3''-o-methyltransferase activity","synonyms":[{"name":"erythromycin C 3''-o-methyltransferase activity","type":"narrow"},{"name":"erythromycin D 3''-o-methyltransferase activity","type":"narrow"}],"termid":"GO:0102307"}


id: PBO:0014301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific repeat containing protein","termid":"PBO:0014301"}


id: PBO:0069336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 596, pseudogene","termid":"PBO:0069336"}


id: GO:2000443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of toll-like receptor 21 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor signaling pathway","termid":"GO:0034121"},{"relation_name":"regulates","term_name":"toll-like receptor 21 signaling pathway","termid":"GO:0035682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 21 signaling pathway","synonyms":[{"name":"regulation of TLR21 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 21 signalling pathway","type":"exact"}],"termid":"GO:2000443"}


id: PBO:0075640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 5","termid":"PBO:0075640"}


id: GO:0004501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH(2) + ecdysone + O2 = 20-hydroxyecdysone + A + H2O.","definition_xrefs":["EC:1.14.99.22","RHEA:14021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ecdysone 20-monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-18799","KEGG_REACTION:R02374"],"synonyms":[{"name":"alpha-ecdysone C-20 hydroxylase activity","type":"related"},{"name":"ecdysone 20-hydroxylase activity","type":"exact"},{"name":"ecdysone modification","type":"broad"},{"name":"ecdysone,hydrogen-donor:oxygen oxidoreductase (20-hydroxylating)","type":"related"}],"termid":"GO:0004501"}


id: PATO:0001902
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A directional quality inhering in a bearer by virtue of the bearer's having one direction only.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direction","termid":"PATO:0000039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unidirectional","termid":"PATO:0001902"}


id: PBO:0055178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2602","termid":"PBO:0055178"}


id: RO:0003310
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a condition (a phenotype or disease) and an entity (e.g. a chemical, environmental exposure, or some form of genetic variation) where some or all aspects of the condition are reduced or eliminated by the presence of the entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition_ameliorated_by","termid":"RO:0003310"}


id: PBO:0044295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC4 antisense RNA 1","termid":"PBO:0044295"}


id: MONDO:0009258
data:
  {"annotated_genes":["SJAG_02954"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86295],"is_not":false,"summary":null,"term":"MONDO:0009258"}]},"cv_name":"mondo","definition":"Classic galactosemia is a life-threatening metabolic disease with onset in the neonatal period. Infants usually develop feeding difficulties, lethargy, and severe liver disease.","definition_xrefs":["Orphanet:79239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosemia","termid":"MONDO:0018116"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"},{"relation_name":"is_a","term_name":"disorder of galactose and fructose metabolism","termid":"MONDO:0800152"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005047"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005047","MONDO:0037792","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"classic galactosemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111459","icd11.foundation:2011000259","NANDO:2200532","OMIM:230400","SCTID:10899004","MEDGEN:82777","NANDO:1200851","GARD:13639","UMLS:C0268151"],"synonyms":[{"name":"GALT deficiency","type":"exact"},{"name":"Galt deficiency","type":"related"},{"name":"classic galactosemia","type":"exact"},{"name":"classical galactosemia, homozygous duarte-type","type":"narrow"},{"name":"galactose-1-phosphate uridyltransferase deficiency","type":"exact"},{"name":"galactose-1-phosphate uridylyltransferase deficiency","type":"related"},{"name":"galactosemia","type":"related"},{"name":"galactosemia type 1","type":"exact"},{"name":"galactosemia, Duarte variant","type":"related"},{"name":"galactosemia, classic","type":"related"},{"name":"transferase deficiency","type":"related"}],"termid":"MONDO:0009258","terms_by_termid":{"MONDO:0009258":null},"xrefs":{"Monarch":{"xref_id":"0009258"}}}


id: GO:0032910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of transforming growth factor-beta3.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transforming growth factor beta production","termid":"GO:0071634"},{"relation_name":"regulates","term_name":"transforming growth factor beta3 production","termid":"GO:0032907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of transforming growth factor beta3 production","synonyms":[{"name":"regulation of TGF-B3 production","type":"exact"},{"name":"regulation of TGFB3 production","type":"exact"},{"name":"regulation of transforming growth factor-beta3 production","type":"exact"}],"termid":"GO:0032910"}


id: PR:O60145
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-dependent kinase 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.15","secondary_identifiers":["UniProtKB:O60145"],"synonyms":[{"name":"Spom972h-CDK10","type":"exact"}],"termid":"PR:O60145"}


id: PBO:0036127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_movement_within_plasma_membrane","termid":"PBO:0036127"}


id: FYPO:0002389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric heterochromatin","termid":"FYPO:0008154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to heterochromatin at centromere outer repeat","secondary_identifiers":["FYPO:0005081"],"synonyms":[{"name":"normal protein localisation to chromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localization at centromere otr","type":"exact"},{"name":"normal protein localization at centromeric outer repeat region","type":"exact"},{"name":"normal protein localization at pericentric region","type":"related"},{"name":"normal protein localization at pericentromeric region","type":"related"},{"name":"normal protein localization to centromere outer repeat heterochromatin","type":"exact"},{"name":"normal protein localization to chromatin at centromere otr","type":"exact"},{"name":"normal protein localization to chromatin at centromere outer repeat","type":"exact"},{"name":"normal protein localization to chromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere outer repeat during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at centromeric outer repeat","type":"exact"},{"name":"normal protein localization to chromatin at pericentric region","type":"related"},{"name":"normal protein localization to chromatin at pericentromeric region","type":"related"},{"name":"normal protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002389"}


id: MONDO:0017886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"MiT family translocation renal cell carcinoma (t-RCC) is a rare subtype of renal cell carcinoma with recurrent genetic abnormalities, harboring rearrangements of the TFE3 (Xp11 t-RCC) or TFEB [t(6;11) t-RCC] genes. The t(6;11) t-RCC has distinctive histologic features of biphasic appearance with larger epitheloid and smaller eosinophilic cells. The symptoms are usually non-specific and include hematuria, flank pain, palpable abdominal mass and/or systemic symptoms of anemia, fatigue and fever.","definition_xrefs":["Orphanet:319308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"MIT family translocation renal cell carcinoma","secondary_identifiers":["GARD:17446","MEDGEN:1376834","SCTID:764694005","NCIT:C154494","UMLS:C4518356","DOID:0081413"],"synonyms":[{"name":"carcinoma associated with MITF/TFE translocation","type":"exact"},{"name":"translocation renal cell carcinoma","type":"exact"}],"termid":"MONDO:0017886","xrefs":{"Monarch":{"xref_id":"0017886"}}}


id: PBO:0051321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR22-1 (pseudogene)","termid":"PBO:0051321"}


id: PBO:0109961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external invertase, beta-fructofuranosidase Inv2","termid":"PBO:0109961"}


id: MONDO:0009875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any achromatopsia in which the cause of the disease is a mutation in the CNGB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"achromatopsia","termid":"MONDO:0018852"},{"relation_name":"is_a","term_name":"CNGB3-related retinopathy","termid":"MONDO:0100446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"achromatopsia 3","secondary_identifiers":["UMLS:C1849792","MEDGEN:340413","DOID:0110008","GARD:9650","OMIM:262300"],"synonyms":[{"name":"ACHM1","type":"exact"},{"name":"ACHM1 (formerly)","type":"related"},{"name":"ACHM1, formerly","type":"related"},{"name":"ACHM3","type":"exact"},{"name":"CNGB3 achromatopsia","type":"exact"},{"name":"RMCH1","type":"exact"},{"name":"RMCH1 (formerly)","type":"related"},{"name":"Rod monochromacy 1 (formerly)","type":"related"},{"name":"Rod monochromatism 1 (formerly)","type":"related"},{"name":"achromatopsia 3","type":"exact"},{"name":"achromatopsia caused by mutation in CNGB3","type":"exact"},{"name":"achromatopsia type 3","type":"exact"},{"name":"achromatopsia with myopia","type":"related"},{"name":"rod monochromacy 1","type":"exact"},{"name":"rod monochromacy 1, formerly","type":"related"},{"name":"rod monochromatism 1","type":"exact"},{"name":"rod monochromatism 1, formerly","type":"related"},{"name":"total colorblindness with myopia","type":"related"}],"termid":"MONDO:0009875","xrefs":{"Monarch":{"xref_id":"0009875"}}}


id: PBO:0077507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 225","termid":"PBO:0077507"}


id: GO:0061548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a ganglion over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ganglion development","synonyms":[{"name":"ganglia development","type":"related"},{"name":"gangliogenesis","type":"narrow"}],"termid":"GO:0061548"}


id: PR:Q9P6I6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1198.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6I6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1198.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.03c","synonyms":[{"name":"Spom972h-SPBC1198.03c","type":"exact"}],"termid":"PR:Q9P6I6"}


id: PBO:0034750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Zas1 (predicted)","termid":"PBO:0034750"}


id: PR:Q09893
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.05","synonyms":[{"name":"Spom972h-SPAC24B11.05","type":"exact"}],"termid":"PR:Q09893"}


id: PBO:0088323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORVET complex WD repeat subunit Vps8","termid":"PBO:0088323"}


id: GO:0015755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fructose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"fructose transmembrane transport","synonyms":[{"name":"fructose transport","type":"related"}],"termid":"GO:0015755"}


id: PBO:0060554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin","termid":"PBO:0060554"}


id: PBO:0077153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLC domain containing 3B","termid":"PBO:0077153"}


id: GO:0070282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to pyridoxine, 4,5-bis(hydroxymethyl)-2-methylpyridin-3-ol, a form of vitamin B6.","definition_xrefs":["CHEBI:16709","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B6 binding","termid":"GO:0070279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"pyridoxine binding","termid":"GO:0070282"}


id: PBO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase Lag1","termid":"PBO:0000764"}


id: MOD:01155
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a lipid-like group either through acylation, alkylation, or amidation.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoconjugated residue","termid":"MOD:01155"}


id: GO:2001157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of proline catabolic process to glutamate.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine catabolic process","termid":"GO:0033242"},{"relation_name":"is_a","term_name":"negative regulation of glutamate metabolic process","termid":"GO:2000212"},{"relation_name":"is_a","term_name":"negative regulation of proline metabolic process","termid":"GO:2000215"},{"relation_name":"is_a","term_name":"regulation of proline catabolic process to glutamate","termid":"GO:2001156"},{"relation_name":"negatively_regulates","term_name":"proline catabolic process to glutamate","termid":"GO:0010133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"negative regulation of proline catabolic process to glutamate","synonyms":[{"name":"negative regulation of proline breakdown to glutamate","type":"exact"},{"name":"negative regulation of proline degradation to glutamate","type":"exact"},{"name":"negative regulation of proline oxidation","type":"related"}],"termid":"GO:2001157"}


id: GO:1902526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein monoubiquitination.","definition_xrefs":["PMID:21931591","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein ubiquitination","termid":"GO:0031397"},{"relation_name":"is_a","term_name":"regulation of protein monoubiquitination","termid":"GO:1902525"},{"relation_name":"negatively_regulates","term_name":"protein monoubiquitination","termid":"GO:0006513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein monoubiquitination","synonyms":[{"name":"down regulation of protein monoubiquitination","type":"exact"},{"name":"down regulation of protein monoubiquitinylation","type":"exact"},{"name":"down regulation of protein monoubiquitylation","type":"exact"},{"name":"down-regulation of protein monoubiquitination","type":"exact"},{"name":"down-regulation of protein monoubiquitinylation","type":"exact"},{"name":"down-regulation of protein monoubiquitylation","type":"exact"},{"name":"downregulation of protein monoubiquitination","type":"exact"},{"name":"downregulation of protein monoubiquitinylation","type":"exact"},{"name":"downregulation of protein monoubiquitylation","type":"exact"},{"name":"inhibition of protein monoubiquitination","type":"narrow"},{"name":"inhibition of protein monoubiquitinylation","type":"narrow"},{"name":"inhibition of protein monoubiquitylation","type":"narrow"},{"name":"negative regulation of protein monoubiquitinylation","type":"exact"},{"name":"negative regulation of protein monoubiquitylation","type":"exact"}],"termid":"GO:1902526"}


id: GO:0098695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any inositol 1,4,5-trisphosphate receptor activity that is involved in regulation of postsynaptic cytosolic calcium ion concentration.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol 1,4,5-trisphosphate-gated calcium channel activity","termid":"GO:0005220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate receptor activity involved in regulation of postsynaptic cytosolic calcium levels","synonyms":[{"name":"IP3 receptor activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0098695"}


id: PBO:0070485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 20","termid":"PBO:0070485"}


id: MONDO:0014624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brown syndrome is a rare eye disorder characterized by defects in eye movements caused by abnormalities of the superior oblique tendon sheath of the superior oblique muscle.","direct_ancestors":[{"relation_name":"is_a","term_name":"mechanical strabismus","termid":"MONDO:0004753"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brown syndrome","secondary_identifiers":["DOID:10235","SCTID:35929003","ICD9:378.61","MEDGEN:102332","UMLS:C0155339","OMIM:616407"],"synonyms":[{"name":"BRWNS","type":"exact"},{"name":"Brown syndrome","type":"exact"},{"name":"Brown tendon sheath syndrome","type":"exact"},{"name":"Brown's (tendon) sheath syndrome","type":"exact"},{"name":"Brown's sheath syndrome","type":"exact"},{"name":"Brown's tendon sheath syndrome","type":"exact"},{"name":"superior oblique tendon sheath syndrome","type":"exact"},{"name":"tendon sheath adherence, Superior oblique","type":"exact"}],"termid":"MONDO:0014624","xrefs":{"Monarch":{"xref_id":"0014624"}}}


id: PBO:0027082
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027082"}


id: GO:0170056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + H+ + NAD(P)H + O2 = 7-dehydrocholesterol + 2 H2O + NAD(P)+.","definition_xrefs":["PMID:21632547","EC:1.14.19.21","PMID:31521708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol desaturase activity","termid":"GO:0070704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cholesterol 7-desaturase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:RXN-16379"],"synonyms":[{"name":"C-7 cholesterol dehydrogenase","type":"exact"},{"name":"cholesterol 7,8-dehydrogenase","type":"exact"}],"termid":"GO:0170056"}


id: PBO:0041246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 131","termid":"PBO:0041246"}


id: GO:0071512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a MAP kinase to the nucleus that occurs in the context of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK import into nucleus involved in conjugation with cellular fusion (obsolete GO:0071512)","synonyms":[{"name":"MAPK import into nucleus involved in mating response","type":"related"},{"name":"conjugation with cellular fusion, MAPK import into nucleus","type":"exact"},{"name":"conjugation with cellular fusion, nuclear translocation of MAPK","type":"narrow"},{"name":"nuclear translocation of MAPK involved in conjugation with cellular fusion","type":"narrow"},{"name":"nuclear translocation of MAPK involved in mating response","type":"related"}],"termid":"GO:0071512"}


id: GO:0097726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a LEM domain. The LEM domain (for lamina-associated polypeptide, emerin, MAN1 domain) is present in a group of nuclear proteins that bind chromatin through interaction of the LEM motif with the conserved DNA crosslinking protein, barrier-to-autointegration factor (BAF).","definition_xrefs":["PMID:22399800","GOC:rz","InterPro:IPR003887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"LEM domain binding","synonyms":[{"name":"LAP2, emerin, MAN1 domain binding","type":"exact"},{"name":"lamina-associated polypeptide, emerin, MAN1 domain binding","type":"exact"}],"termid":"GO:0097726"}


id: PBO:0065259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 23C","termid":"PBO:0065259"}


id: GO:0034925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pyrene + O2 + 2 H+ + 2 e- = pyrene-4,5-oxide + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrene 4,5-monooxygenase activity (obsolete GO:0034925)","termid":"GO:0034925"}


id: GO:0032461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein oligomerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of protein oligomerization","termid":"GO:0032459"},{"relation_name":"positively_regulates","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein oligomerization","synonyms":[{"name":"activation of protein oligomerization","type":"narrow"},{"name":"induction of protein oligomerization","type":"related"},{"name":"stimulation of protein oligomerization","type":"narrow"},{"name":"up regulation of protein oligomerization","type":"exact"},{"name":"up-regulation of protein oligomerization","type":"exact"},{"name":"upregulation of protein oligomerization","type":"exact"}],"termid":"GO:0032461"}


id: MONDO:0700047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoporosis occurring in premenopausal women with existing fragility fractures, diseases or treatments known to cause bone loss or fractures.","definition_xrefs":["PMID:28394826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoporosis","termid":"MONDO:0005298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"premenopausal osteoporosis","termid":"MONDO:0700047","xrefs":{"Monarch":{"xref_id":"0700047"}}}


id: GO:0160249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues, occurring through a UDP-glucose intermediate.","definition_xrefs":["MetaCyc:PWY-5067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen biosynthetic process","termid":"GO:0005978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0006091"],"is_obsolete":false,"name":"glycogen biosynthetic process via UDP-glucose","termid":"GO:0160249"}


id: PBO:0039666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit mu 1","termid":"PBO:0039666"}


id: MONDO:0021479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the oropharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"neoplasm of oropharynx","termid":"MONDO:0021364"},{"relation_name":"is_a","term_name":"benign neoplasm of pharynx","termid":"MONDO:0021523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of oropharynx","secondary_identifiers":["ICD9:210.6","UMLS:C0347229","MEDGEN:87572","icd11.foundation:441557450","NCIT:C4604","SCTID:92259008"],"synonyms":[{"name":"benign neoplasm of the oropharynx","type":"exact"},{"name":"benign oropharyngeal neoplasm","type":"exact"},{"name":"benign oropharyngeal tumor","type":"exact"},{"name":"benign oropharyngeal tumour","type":"exact"},{"name":"benign tumor of oropharynx","type":"exact"},{"name":"benign tumor of the oropharynx","type":"exact"},{"name":"benign tumour of oropharynx","type":"exact"},{"name":"benign tumour of the oropharynx","type":"exact"},{"name":"oropharyngeal neoplasm benign","type":"exact"},{"name":"oropharynx benign neoplasm","type":"exact"}],"termid":"MONDO:0021479","xrefs":{"Monarch":{"xref_id":"0021479"}}}


id: PBO:0060117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 18","termid":"PBO:0060117"}


id: PBO:0089035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Niemann-Pick disease type C2 protein hE1 homolog Npc2","termid":"PBO:0089035"}


id: PR:Q9P381
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC13A2.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13A2.03","synonyms":[{"name":"CDP-DAG synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-DG synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diacylglycerol synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diglyceride pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDP-diglyceride synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CDS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"CTP:phosphatidate cytidylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC13A2.03","type":"exact"}],"termid":"PR:Q9P381"}


id: PBO:0117391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AZIN1 antisense RNA 2","termid":"PBO:0117391"}


id: PBO:0052649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 17","termid":"PBO:0052649"}


id: MONDO:0014591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant Robinow syndrome in which the cause of the disease is a mutation in the DVL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Robinow syndrome","termid":"MONDO:0008389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Robinow syndrome 2","secondary_identifiers":["UMLS:C4225363","OMIM:616331","GARD:18548","MEDGEN:897039","DOID:0060765"],"synonyms":[{"name":"DRS2","type":"exact"},{"name":"DVL1 autosomal dominant Robinow syndrome","type":"exact"},{"name":"Robinow syndrome, autosomal dominant 2","type":"related"},{"name":"Robinow syndrome, autosomal dominant type 2","type":"exact"},{"name":"autosomal dominant Robinow syndrome caused by mutation in DVL1","type":"exact"},{"name":"autosomal dominant Robinow syndrome type 2","type":"exact"}],"termid":"MONDO:0014591","xrefs":{"Monarch":{"xref_id":"0014591"}}}


id: GO:1904954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway that is involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["PMID:22988876","GO_REF:0000060","GOC:PARL","GOC:bf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation (obsolete GO:1904954)","synonyms":[{"name":"Wnt receptor signaling pathway through beta-catenin involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway through beta-catenin involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signaling pathway via beta-catenin involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in mDA neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in midbrain DA neurogenesis","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"Wnt receptor signalling pathway through beta-catenin involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"canonical Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"canonical Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"canonical Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"canonical Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"canonical Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"frizzled-1 receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"frizzled-1 receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"}],"termid":"GO:1904954"}


id: PBO:0044126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 12, pseudogene","termid":"PBO:0044126"}


id: GO:0033612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor that possesses protein serine/threonine kinase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"receptor serine/threonine kinase binding","synonyms":[{"name":"transmembrane receptor protein serine/threonine kinase ligand binding","type":"related"}],"termid":"GO:0033612"}


id: PBO:0063979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 13","termid":"PBO:0063979"}


id: FYPO:0005940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the replicative lifespan of a cell population, i.e. the number of divisions cells in the population undergo before death, is higher than normal.","definition_xrefs":["PMID:28139976","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased replicative lifespan","synonyms":[{"name":"increased cell population replicative lifespan","type":"exact"},{"name":"increased population replicative lifespan","type":"exact"}],"termid":"FYPO:0005940"}


id: PBO:0062994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C and casein kinase substrate in neurons 3","termid":"PBO:0062994"}


id: PBO:0002608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Hca4 (predicted)","termid":"PBO:0002608"}


id: PBO:0057202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 374a","termid":"PBO:0057202"}


id: PBO:0044995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diaphanous related formin 2","termid":"PBO:0044995"}


id: PBO:0065810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3D, member RAS oncogene family","termid":"PBO:0065810"}


id: PBO:0044585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drebrin like","termid":"PBO:0044585"}


id: GO:1903778
data:
  {"annotated_genes":["SJAG_01367"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a vacuolar membrane.","definition_xrefs":["GOC:TermGenie","PMID:25378562","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to vacuole","termid":"GO:0072665"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01367":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to vacuolar membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in vacuolar membrane","type":"exact"},{"name":"protein localisation to vacuolar membrane","type":"exact"},{"name":"protein localization in vacuolar membrane","type":"exact"}],"termid":"GO:1903778","terms_by_termid":{"GO:0044395":null}}


id: PBO:0068096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 403","termid":"PBO:0068096"}


id: GO:0032267
data:
  {"annotated_genes":["SJAG_05249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65512],"is_not":false,"summary":null,"term":"GO:0032267"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + cytidine(34) in tRNA(Ile2) + L-lysine = AMP + diphosphate + H+ + lysidine(34) in tRNA(Ile2). This modification converts both the codon specificity of tRNA(Ile) from AUG to AUA and its amino acid specificity from methionine to isoleucine.","definition_xrefs":["RHEA:43744","PMID:14527414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0140098","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"tRNA(Ile)-lysidine synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:6.3.4.19"],"synonyms":[{"name":"tRNA(Ile)-2-lysyl-cytidine synthase activity","type":"exact"},{"name":"tRNA(Ile)-lysidine synthetase activity","type":"exact"}],"termid":"GO:0032267","terms_by_termid":{"GO:0032267":null}}


id: PBO:0083519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF MRPL9/YGR220C","termid":"PBO:0083519"}


id: GO:0180034
data:
  {"annotated_genes":["SJAG_01713"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108056],"is_not":false,"summary":null,"term":"GO:0180034"}]},"cv_name":"biological_process","definition":"Any process involved in transcription termination-coupled 3' processing of RNA polymerase II lncRNA transcripts by the 3' end cleavage and addition of a poly(A) tail.","definition_xrefs":["PMID:31276588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway","termid":"GO:0180012"},{"relation_name":"is_a","term_name":"lncRNA processing","termid":"GO:0180035"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01713":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"co-transcriptional lncRNA 3' end processing, cleavage and polyadenylation pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lncRNA 3' end processing","type":"broad"},{"name":"lncRNA 3'-end processing","type":"broad"}],"termid":"GO:0180034","terms_by_termid":{"GO:0180034":null}}


id: PBO:0045294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 46","termid":"PBO:0045294"}


id: PBO:0048275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 11","termid":"PBO:0048275"}


id: PBO:0089377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, pinin ortholog Pnn1","termid":"PBO:0089377"}


id: FYPO:0006328
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in any spliceosomal complex is lower than normal.","definition_xrefs":["PMID:28947618","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal protein complex composition","termid":"FYPO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level in spliceosomal complex","synonyms":[{"name":"decreased protein level in spliceosomal complex during mitotic cell cycle","type":"related"},{"name":"decreased protein level in spliceosomal complex during vegetative growth","type":"exact"},{"name":"decreased protein level in spliceosome","type":"broad"},{"name":"decreased spliceosomal complex protein level during vegetative growth","type":"exact"},{"name":"reduced protein level in spliceosomal complex","type":"exact"}],"termid":"FYPO:0006328"}


id: GO:0050324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + taurocyamine = N-phosphotaurocyamine + ADP + 2 H+.","definition_xrefs":["EC:2.7.3.4","RHEA:22516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"taurocyamine kinase activity","secondary_identifiers":["KEGG_REACTION:R03785","MetaCyc:TAUROCYAMINE-KINASE-RXN"],"synonyms":[{"name":"ATP:taurocyamine N-phosphotransferase activity","type":"related"},{"name":"ATP:taurocyamine phosphotransferase activity","type":"related"},{"name":"taurocyamine phosphotransferase activity","type":"related"}],"termid":"GO:0050324"}


id: PBO:0060854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEK2 pseudogene 2","termid":"PBO:0060854"}


id: PBO:0061661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 35 pseudogene 1","termid":"PBO:0061661"}


id: GO:0042480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of eye photoreceptor development.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of eye photoreceptor cell development","termid":"GO:0042478"},{"relation_name":"negatively_regulates","term_name":"eye photoreceptor cell development","termid":"GO:0042462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eye photoreceptor cell development","synonyms":[{"name":"down regulation of eye photoreceptor cell development","type":"exact"},{"name":"down-regulation of eye photoreceptor cell development","type":"exact"},{"name":"downregulation of eye photoreceptor cell development","type":"exact"},{"name":"inhibition of eye photoreceptor cell development","type":"narrow"},{"name":"negative regulation of eye photoreceptor development","type":"exact"}],"termid":"GO:0042480"}


id: MONDO:0013703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 33","secondary_identifiers":["MEDGEN:482169","UMLS:C3280539","OMIM:614341","DOID:0081194","GARD:22556"],"synonyms":[{"name":"MRT33","type":"exact"},{"name":"intellectual disability, autosomal recessive 33","type":"exact"},{"name":"mental retardation, autosomal recessive 33","type":"related"}],"termid":"MONDO:0013703","xrefs":{"Monarch":{"xref_id":"0013703"}}}


id: GO:1905613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of developmental vegetative growth.","definition_xrefs":["GO_REF:0000058","PMID:11606552","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"developmental vegetative growth","termid":"GO:0080186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of developmental vegetative growth","termid":"GO:1905613"}


id: MONDO:1012952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amelogenesis imperfecta that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"mouth disorder, non-human animal","termid":"MONDO:1011333"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, non-human animal","termid":"MONDO:1012952","xrefs":{"Monarch":{"xref_id":"1012952"}}}


id: GO:0048500
data:
  {"annotated_genes":["SJAG_02456","SJAG_01759","SJAG_03684","SJAG_01282","SJAG_01840","SJAG_03411"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[56982,75768,72807,73346,91154,62787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005786"}]},"cv_name":"cellular_component","definition":"A complex of protein and RNA which facilitates translocation of proteins across membranes.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01282":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_02456":null,"SJAG_03411":null,"SJAG_03684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"signal recognition particle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Signal_recognition_particle"],"termid":"GO:0048500","terms_by_termid":{"GO:0005786":null}}


id: PBO:0010274
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculomotor apraxia 1","termid":"PBO:0010274"}


id: MONDO:0100239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of hypertrophic pyloric stenosis that is inherited.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic pyloric stenosis","termid":"MONDO:0001560"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"inherited hypertrophic pyloric stenosis","secondary_identifiers":["OMIMPS:179010","UMLS:C0700639","MEDGEN:196010"],"synonyms":[{"name":"hereditary hypertrophic pyloric stenosis","type":"exact"}],"termid":"MONDO:0100239","xrefs":{"Monarch":{"xref_id":"0100239"}}}


id: GO:0009898
data:
  {"annotated_genes":["SJAG_04077","SJAG_02989","SJAG_01242","SJAG_04509","SJAG_02233","SJAG_02444","SJAG_04666","SJAG_00368","SJAG_02605","SJAG_05207","SJAG_04026","SJAG_01738","SJAG_03081","SJAG_01774","SJAG_03596"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71146,76636,78581,80090,88200,90052,92739,99308,111235],"is_not":false,"summary":null,"term":"GO:0009898"},{"annotations":[106951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106186"},{"annotations":[110911],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031234"},{"annotations":[74639,75658,80705,106859],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"The leaflet the plasma membrane that faces the cytoplasm and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:tb","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_01242":null,"SJAG_01738":null,"SJAG_01774":null,"SJAG_02233":null,"SJAG_02444":null,"SJAG_02605":null,"SJAG_02989":null,"SJAG_03081":null,"SJAG_03596":null,"SJAG_04026":null,"SJAG_04077":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of plasma membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"internal leaflet of plasma membrane","type":"exact"},{"name":"internal side of plasma membrane","type":"exact"},{"name":"juxtamembrane","type":"broad"}],"termid":"GO:0009898","terms_by_termid":{"GO:0005834":null,"GO:0009898":null,"GO:0031234":null,"GO:0106186":null}}


id: GO:1900580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (17Z)-protosta-17(20),24-dien-3beta-ol.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"triterpenoid catabolic process","termid":"GO:0016105"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"(17Z)-protosta-17(20),24-dien-3beta-ol metabolic process","termid":"GO:1900579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(17Z)-protosta-17(20),24-dien-3beta-ol catabolic process","synonyms":[{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol breakdown","type":"exact"},{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol catabolism","type":"exact"},{"name":"(17Z)-protosta-17(20),24-dien-3beta-ol degradation","type":"exact"}],"termid":"GO:1900580"}


id: GO:0052511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the ethylene-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont ethylene-mediated defense response (obsolete GO:0052511)","synonyms":[{"name":"activation by organism of symbiont ethylene-mediated defense response","type":"narrow"},{"name":"induction by organism of symbiont ethylene-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of symbiont ethylene-mediated defense response","type":"exact"},{"name":"upregulation by organism of symbiont ethylene-mediated defense response","type":"narrow"}],"termid":"GO:0052511"}


id: PBO:0070982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19 pseudogene 6","termid":"PBO:0070982"}


id: GO:0038014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which internalization of an insulin receptor stops, prevents, or reduces the frequency, rate or extent of insulin receptor signal transduction. Internalization of insulin in association with its receptor clears insulin from the circulation and is necessary for subsequent insulin dissociation from the receptor and insulin degradation.","definition_xrefs":["PMID:18492485","GOC:signaling","PMID:7821727","PMID:7978876","GOC:bf","PMID:9609114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction by receptor internalization","termid":"GO:0038011"},{"relation_name":"is_a","term_name":"insulin receptor internalization","termid":"GO:0038016"},{"relation_name":"is_a","term_name":"negative regulation of insulin receptor signaling pathway","termid":"GO:0046627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0016192","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of insulin receptor signaling pathway by insulin receptor internalization","synonyms":[{"name":"agonist-stimulated insulin receptor internalization","type":"broad"},{"name":"negative regulation of insulin receptor signalling pathway by insulin receptor internalization","type":"exact"}],"termid":"GO:0038014"}


id: PBO:0043452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 3","termid":"PBO:0043452"}


id: GO:1903348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tight junction assembly.","definition_xrefs":["GO_REF:0000058","PMID:25050009","GOC:jz","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell junction assembly","termid":"GO:1901890"},{"relation_name":"is_a","term_name":"regulation of bicellular tight junction assembly","termid":"GO:2000810"},{"relation_name":"positively_regulates","term_name":"bicellular tight junction assembly","termid":"GO:0070830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of bicellular tight junction assembly","synonyms":[{"name":"activation of tight junction assembly","type":"narrow"},{"name":"activation of tight junction formation","type":"narrow"},{"name":"positive regulation of tight junction formation","type":"exact"},{"name":"up regulation of tight junction assembly","type":"exact"},{"name":"up regulation of tight junction formation","type":"exact"},{"name":"up-regulation of tight junction assembly","type":"exact"},{"name":"up-regulation of tight junction formation","type":"exact"},{"name":"upregulation of tight junction assembly","type":"exact"},{"name":"upregulation of tight junction formation","type":"exact"}],"termid":"GO:1903348"}


id: PBO:0086832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function, potential Cdc28p substrate; transcription is activated by paralogous transcription factors Yrm1p and Yrr1p along with genes involved in multidrug resistance; YGR035C has a paralog, YLR346C, that arose from the whole genome duplication","termid":"PBO:0086832"}


id: PBO:0041818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capping protein regulator and myosin 1 linker 3","termid":"PBO:0041818"}


id: PBO:0005363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG ortholog Alp14","termid":"PBO:0005363"}


id: PBO:0060133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 34","termid":"PBO:0060133"}


id: GO:0010254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the floral nectaries over time, from its formation to the mature structure.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nectary development","termid":"GO:0010254"}


id: PBO:0011409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_output_o_axis_of","termid":"PBO:0011409"}


id: GO:0097096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which any suture between facial bones is generated and organized.","definition_xrefs":["GOC:pr","GOC:sl","Wikipedia:Cranial_sutures","Wikipedia:Head_and_neck_anatomy#Musculoskeletal_system"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniofacial suture morphogenesis","termid":"GO:0097094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial suture morphogenesis","termid":"GO:0097096"}


id: MONDO:0000188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epileptic encephalopathy resulting from impaired glucose transport into the brain.","definition_xrefs":["PMID:17718830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"},{"relation_name":"is_a","term_name":"carbohydrate transport disease","termid":"MONDO:0045015"},{"relation_name":"is_a","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005027","MONDO:0005066"],"is_obsolete":false,"name":"GLUT1 deficiency syndrome","secondary_identifiers":["UMLS:C1847501","OMIMPS:606777","DOID:0070560","NANDO:1200799","MEDGEN:337833"],"synonyms":[{"name":"GLUT1 deficiency syndrome","type":"exact"},{"name":"GLUT1DS","type":"exact"}],"termid":"MONDO:0000188","xrefs":{"Monarch":{"xref_id":"0000188"}}}


id: GO:0009317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that catalyzes the first step in long-chain fatty acid biosynthesis. For example, in E. coli the complex is heterohexameric and composed of biotin carbonyl carrier protein, biotin carboxylase and the acetate CoA-transferase complex.","definition_xrefs":["PMID:12121720","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"acetyl-CoA carboxylase complex","synonyms":[{"name":"ACCase complex","type":"exact"}],"termid":"GO:0009317"}


id: PBO:0054971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2385","termid":"PBO:0054971"}


id: GO:0019742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentacyclic triterpenoid compounds, terpenoids with six isoprene units and 5 carbon rings.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triterpenoid metabolic process","termid":"GO:0006722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pentacyclic triterpenoid metabolic process","synonyms":[{"name":"pentacyclic triterpenoid metabolism","type":"exact"}],"termid":"GO:0019742"}


id: PR:O74956
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrps8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein subunit S8, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.10c","synonyms":[{"name":"Spom972h-mrps8","type":"exact"}],"termid":"PR:O74956"}


id: PBO:0047466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc receptor like 6","termid":"PBO:0047466"}


id: GO:1990548
data:
  {"annotated_genes":["SJAG_03503"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107923],"is_not":false,"summary":null,"term":"GO:1990548"}]},"cv_name":"biological_process","definition":"The process in which FAD is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:14555654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD transmembrane transport","termid":"GO:0035350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"mitochondrial FAD transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990548","terms_by_termid":{"GO:1990548":null}}


id: PBO:0076399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAF1A antisense RNA 1","termid":"PBO:0076399"}


id: MONDO:0030953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"short stature, facial dysmorphism, and skeletal anomalies with or without cardiac anomalies","termid":"MONDO:0031439"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature, facial dysmorphism, and skeletal anomalies with or without cardiac anomalies 2","secondary_identifiers":["DOID:0112358","MEDGEN:1782253","OMIM:619184","UMLS:C5543057"],"synonyms":[{"name":"SSFSC2","type":"exact"},{"name":"short stature, facial dysmorphism, and skeletal anomalies with or without cardiac anomalies","type":"broad"},{"name":"short stature, facial dysmorphism, and skeletal anomalies with or without cardiac anomalies 2","type":"exact"}],"termid":"MONDO:0030953","xrefs":{"Monarch":{"xref_id":"0030953"}}}


id: PBO:0030505
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_GW_7647","termid":"PBO:0030505"}


id: PBO:0050279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan mediated motility receptor","termid":"PBO:0050279"}


id: PBO:0091617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix protein, YjgF family protein Mmf2, reactive intermediate imine deaminase A homolog","termid":"PBO:0091617"}


id: GO:0060537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of muscle tissue over time, from its initial formation to its mature state. Muscle tissue is a contractile tissue made up of actin and myosin fibers.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle tissue development","termid":"GO:0060537"}


id: PBO:0067582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 740, pseudogene","termid":"PBO:0067582"}


id: PBO:0064054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 88","termid":"PBO:0064054"}


id: PBO:0078021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 11","termid":"PBO:0078021"}


id: PBO:0038554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 9","termid":"PBO:0038554"}


id: FYPO:0000963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on hydroxyurea","synonyms":[{"name":"normal cell population growth in presence of hydroxyurea","type":"exact"},{"name":"normal cell population growth on HU","type":"exact"},{"name":"normal cell population growth on hydroxyurea","type":"exact"},{"name":"normal vegetative cell population growth on hydroxyurea","type":"exact"}],"termid":"FYPO:0000963"}


id: PBO:0052133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 1","termid":"PBO:0052133"}


id: MONDO:0010550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked Charcot-Marie-Tooth disease type 2 is a rare, genetic, peripheral sensorimotor neuropathy characterized by an X-linked recessive inheritance pattern and the infantile- to childhood-onset of progressive, distal muscle weakness and atrophy (more prominent in the lower extremities than in the upper extremities), pes cavus, and absent tendon reflexes. Sensory impairment and intellectual disability has been reported in some individuals.","definition_xrefs":["Orphanet:101076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type X","termid":"MONDO:0018994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease X-linked recessive 2","secondary_identifiers":["OMIM:302801","SCTID:763457000","UMLS:C1844873","MEDGEN:336803","DOID:0110208","GARD:1243","MESH:C535302"],"synonyms":[{"name":"CMTX 2","type":"exact"},{"name":"CMTX2","type":"exact"},{"name":"Charcot Marie Tooth disease X-linked recessive 2","type":"exact"},{"name":"Charcot-Marie-Tooth disease X-linked recessive type 2","type":"exact"},{"name":"Charcot-Marie-Tooth disease, X-linked recessive, 2","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy X-linked recessive 2","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, X-linked recessive, 2","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, X-linked recessive, 2, X-linked recessive","type":"exact"},{"name":"X-linked Charcot-Marie-Tooth disease type 2","type":"exact"}],"termid":"MONDO:0010550","xrefs":{"Monarch":{"xref_id":"0010550"}}}


id: GO:0010184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cytokinins, a class of adenine-derived compounds that can function in plants as growth regulators, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone transport","termid":"GO:0009914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"cytokinin transport","termid":"GO:0010184"}


id: GO:0090677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phenotypic switching process where a cell reversibly differentiates and dedifferentiates from one cell type into another.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reversible differentiation","termid":"GO:0090677"}


id: PBO:0041401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 58","termid":"PBO:0041401"}


id: PBO:0069453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 718, pseudogene","termid":"PBO:0069453"}


id: PR:Q10719
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fus1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell fusion protein fus1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.02c","synonyms":[{"name":"Spom972h-fus1","type":"exact"}],"termid":"PR:Q10719"}


id: GO:0099638
data:
  {"annotated_genes":["SJAG_03915","SJAG_04565","SJAG_01809","SJAG_04609","SJAG_02282","SJAG_00379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91619,95233,101468,113171,113387,119287],"is_not":false,"summary":null,"term":"GO:0099638"}]},"cv_name":"biological_process","definition":"The directed movement of proteins from the endosome to the plasma membrane in transport vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"endocytic recycling","termid":"GO:0032456"},{"relation_name":"is_a","term_name":"establishment of protein localization to plasma membrane","termid":"GO:0061951"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_01809":null,"SJAG_02282":null,"SJAG_03915":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"endosome to plasma membrane protein transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099638","terms_by_termid":{"GO:0099638":null}}


id: PBO:0029119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mononucleate_cell_with_increased_DNA_content_during_stationary_phase","termid":"PBO:0029119"}


id: GO:1903730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphatidate phosphatase activity.","definition_xrefs":["PMID:24876385","PMID:25359770","PMID:22334681","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphatidate phosphatase activity (obsolete GO:1903730)","synonyms":[{"name":"regulation of 3-sn-phosphatidate phosphohydrolase activity","type":"exact"},{"name":"regulation of acid phosphatidyl phosphatase activity","type":"exact"},{"name":"regulation of phosphatic acid phosphatase activity","type":"exact"},{"name":"regulation of phosphatic acid phosphohydrolase activity","type":"exact"},{"name":"regulation of phosphatidate phosphohydrolase activity","type":"exact"},{"name":"regulation of phosphatidic acid phosphatase activity","type":"exact"}],"termid":"GO:1903730"}


id: MONDO:0004751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diseases of the bony orbit and contents except the eyeball.","definition_xrefs":["MESH:D009916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye adnexa disorder","termid":"MONDO:0000462"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease of orbital part of eye adnexa","secondary_identifiers":["ICD9:376.9","MEDGEN:45214","ICD9:376","DOID:930","UMLS:C0029182"],"synonyms":[{"name":"orbital disease","type":"related"}],"termid":"MONDO:0004751","xrefs":{"Monarch":{"xref_id":"0004751"}}}


id: GO:0030367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-17 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-17 receptor binding","synonyms":[{"name":"IL-17","type":"narrow"},{"name":"interleukin-17 receptor ligand","type":"narrow"}],"termid":"GO:0030367"}


id: FYPO:0003524
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cytoskeleton organization is abnormal at one or both cell tips.","definition_xrefs":["GO:0030036","PMID:24954052","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0004803","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cytoskeleton organization at cell tip","synonyms":[{"name":"abnormal actin cytoskeleton organisation at cell tip","type":"exact"},{"name":"abnormal actin cytoskeleton organization at cell end","type":"exact"},{"name":"abnormal actin cytoskeleton organization at cell tip during mitotic cell cycle","type":"related"},{"name":"abnormal actin cytoskeleton organization at cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0003524"}


id: GO:0001708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular developmental process involved in cell fate commitment in which the cell is designated to follow a developmental path, unless they receive extrinsic cues that direct an alternative fate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell fate commitment","termid":"GO:0045165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate specification","termid":"GO:0001708"}


id: MOD:00458
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a 4x(2)H labeled succinyl group.","definition_xrefs":["PubMed:12175151","Unimod:65#N-term","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino succinylated residue","termid":"MOD:00457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(2)H labeled alpha-amino succinylated residue","synonyms":[{"name":"Succinic anhydride labeling reagent, heavy form (+4amu, 4H2), N-term","type":"related"},{"name":"Succinyl:2H(4)","type":"related"}],"termid":"MOD:00458"}


id: PBO:0074387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG8 nonsense mediated mRNA decay factor","termid":"PBO:0074387"}


id: PBO:0069900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1191, pseudogene","termid":"PBO:0069900"}


id: PBO:0056531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCC regulator of WNT signaling pathway","termid":"PBO:0056531"}


id: PBO:0073581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa like 2B","termid":"PBO:0073581"}


id: GO:1901397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transforming growth factor beta2 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transforming growth factor beta2 activation (obsolete GO:1901397)","synonyms":[{"name":"activation of TGF-beta 2 activation","type":"exact"},{"name":"activation of TGFB2 activation","type":"exact"},{"name":"activation of TGFbeta 2 activation","type":"exact"},{"name":"activation of transforming growth factor beta2 activation","type":"narrow"},{"name":"positive regulation of TGF-beta 2 activation","type":"exact"},{"name":"positive regulation of TGFB2 activation","type":"exact"},{"name":"positive regulation of TGFbeta 2 activation","type":"exact"},{"name":"up regulation of TGF-beta 2 activation","type":"exact"},{"name":"up regulation of TGFB2 activation","type":"exact"},{"name":"up regulation of TGFbeta 2 activation","type":"exact"},{"name":"up regulation of transforming growth factor beta2 activation","type":"exact"},{"name":"up-regulation of TGF-beta 2 activation","type":"exact"},{"name":"up-regulation of TGFB2 activation","type":"exact"},{"name":"up-regulation of TGFbeta 2 activation","type":"exact"},{"name":"up-regulation of transforming growth factor beta2 activation","type":"exact"},{"name":"upregulation of TGF-beta 2 activation","type":"exact"},{"name":"upregulation of TGFB2 activation","type":"exact"},{"name":"upregulation of TGFbeta 2 activation","type":"exact"},{"name":"upregulation of transforming growth factor beta2 activation","type":"exact"}],"termid":"GO:1901397"}


id: PBO:0036078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_deactivation_of_mitotic_spindle_assembly_checkpoint","termid":"PBO:0036078"}


id: GO:0001084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIID class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIID-class binding (obsolete GO:0001084)","synonyms":[{"name":"TFIID-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001084"}


id: PBO:0044484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP26C1 divergent transcript","termid":"PBO:0044484"}


id: PBO:0052938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 22-2","termid":"PBO:0052938"}


id: MOD:01183
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-selenocysteine residues to form L-selenocystine,","definition_xrefs":["RESID:AA0437","PubMed:17715293","PubMed:6076213","ChEBI:28553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"modified L-selenocysteine residue","termid":"MOD:01158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-selenocystine (oxidized selenocysteine) (Sec-Sec)","synonyms":[{"name":"(R,R)-3,3'-diselane-1,2-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-diselenobis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-diselenobisalanine","type":"exact"},{"name":"3,3'-diselenodialanine","type":"exact"},{"name":"CROSSLNK Selenocystine (Sec-Sec)","type":"exact"},{"name":"L-selenocystine","type":"exact"},{"name":"Sec2","type":"exact"},{"name":"beta,beta'-diamino-beta,beta'-dicarboxydiethyldiselenide","type":"exact"},{"name":"beta,beta'-diselenodialanine","type":"exact"},{"name":"bis(alpha-aminopropionic acid)-beta-diselenide","type":"exact"},{"name":"bis(beta-amino-beta-carboxyethyl)diselenide","type":"exact"},{"name":"diselenocysteine","type":"exact"},{"name":"selenium cystine","type":"exact"}],"termid":"MOD:01183"}


id: GO:0044218
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cell membrane of a secondary organism with which the first organism is interacting.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"other organism part","termid":"GO:0044217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"other organism cell membrane","secondary_identifiers":["GO:0044279"],"synonyms":[{"name":"foreign membrane","type":"related"},{"name":"other organism membrane","type":"broad"}],"termid":"GO:0044218"}


id: GO:0004871
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transducer activity (obsolete GO:0004871)","synonyms":[{"name":"hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity","type":"narrow"},{"name":"quorum sensing response regulator activity","type":"narrow"},{"name":"quorum sensing signal generator activity","type":"narrow"}],"termid":"GO:0004871"}


id: GO:0009417
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A class of proteins that are the subunit components of fimbria.","definition_xrefs":["ISBN:0914826859"],"gene_count":0,"genotype_count":0,"name":"obsolete fimbrin (obsolete GO:0009417)","synonyms":[{"name":"fimbrin","type":"exact"}],"termid":"GO:0009417"}


id: PBO:0003058
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat/km 0.46","termid":"PBO:0003058"}


id: GO:0006489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dolichyl diphosphate, a diphosphorylated dolichol derivative.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"dolichyl diphosphate metabolic process","termid":"GO:0046465"},{"relation_name":"part_of","term_name":"dolichol-linked oligosaccharide biosynthetic process","termid":"GO:0006488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0006486"],"is_obsolete":false,"name":"dolichyl diphosphate biosynthetic process","secondary_identifiers":["Reactome:R-HSA-446199"],"synonyms":[{"name":"dolichyl diphosphate anabolism","type":"exact"},{"name":"dolichyl diphosphate biosynthesis","type":"exact"},{"name":"dolichyl diphosphate formation","type":"exact"},{"name":"dolichyl diphosphate synthesis","type":"exact"}],"termid":"GO:0006489"}


id: PBO:0004886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid cohesion protein/DNA polymerase eta Eso1","termid":"PBO:0004886"}


id: MONDO:0019581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acral persistent papular mucinosis is a rare chronic form of localized lichen myxedematosus characterized by the development of multiple symmetrical skin-colored mucinous papules exclusively on the extensor surface of the hands and distal forearms.","definition_xrefs":["Orphanet:90396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localized lichen myxedematosus","termid":"MONDO:0019446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acral persistent papular mucinosis","secondary_identifiers":["MEDGEN:590586","ICD9:701.8","icd11.foundation:712202928","GARD:19140","SCTID:238949006","UMLS:C0406660"],"termid":"MONDO:0019581","xrefs":{"Monarch":{"xref_id":"0019581"}}}


id: PBO:0087182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A34.5; essential for nucleolar assembly and for high polymerase loading rate; nucleolar localization depends on Rpa49p","termid":"PBO:0087182"}


id: PBO:0068690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 71, pseudogene","termid":"PBO:0068690"}


id: PBO:0042837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 36","termid":"PBO:0042837"}


id: GO:0008716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 D-alanine + ATP = D-alanyl-D-alanine + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.2.4","RHEA:11224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"D-alanine-D-alanine ligase activity","secondary_identifiers":["KEGG_REACTION:R01150","MetaCyc:DALADALALIG-RXN"],"synonyms":[{"name":"D-Ala-D-Ala synthetase activity","type":"related"},{"name":"D-alanine:D-alanine ligase (ADP-forming)","type":"related"},{"name":"D-alanyl-D-alanine synthetase activity","type":"related"},{"name":"D-alanylalanine synthetase activity","type":"related"},{"name":"alanine:alanine ligase (ADP-forming) activity","type":"related"},{"name":"alanylalanine synthetase activity","type":"related"}],"termid":"GO:0008716"}


id: GO:0102175
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-beta-hydroxysteroid-4-alpha-carboxylate + NAD+ = a 3-oxosteroid + CO2 + NADH.","definition_xrefs":["RHEA:34775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-beta-hydroxysteroid dehydrogenase [NAD(P)+]/C4-decarboxylase activity","termid":"GO:0000252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-beta-hydroxysteroid dehydrogenase (NAD+)/C4-decarboxylase activity","secondary_identifiers":["EC:1.1.1.418","MetaCyc:RXN-11928"],"termid":"GO:0102175"}


id: GO:0005363
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"}]},"cv_name":"molecular_function","definition":"Enables the transfer of maltose from one side of a membrane to the other. Maltose is the disaccharide 4-O-alpha-D-glucopyranosyl-D-glucopyranose, an intermediate in the enzymatic breakdown of glycogen and starch.","definition_xrefs":["GOC:mtg_transport","ISBN:0198506732","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transmembrane transporter activity","termid":"GO:0015154"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"maltose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015581"],"synonyms":[{"name":"maltose porter activity","type":"exact"}],"termid":"GO:0005363","terms_by_termid":{"GO:0005364":null}}


id: GO:1990364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aldehyde.","definition_xrefs":["GOC:mengo_curators","PMID:23356676"],"gene_count":0,"genotype_count":0,"name":"obsolete response to aldehyde (obsolete GO:1990364)","synonyms":[{"name":"response to aldehyde","type":"exact"}],"termid":"GO:1990364"}


id: MONDO:0002196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal perforation","termid":"MONDO:0006807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"perinatal intestinal perforation","secondary_identifiers":["ICD10CM:P78.0","SCTID:65390006","UMLS:C0159006","DOID:2073","ICD9:777.6","MEDGEN:510691"],"termid":"MONDO:0002196","xrefs":{"Monarch":{"xref_id":"0002196"}}}


id: FYPO:0003906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing bleomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on bleomycin","synonyms":[{"name":"normal cell population growth in presence of bleomycin","type":"exact"},{"name":"normal cell population growth on bleomycin","type":"exact"},{"name":"normal cellular response to bleomycin","type":"related"},{"name":"normal vegetative cell population growth on bleomycin","type":"exact"}],"termid":"FYPO:0003906"}


id: GO:0000183
data:
  {"annotated_genes":["SJAG_01579","SJAG_03844","SJAG_03982","SJAG_00934","SJAG_03255","SJAG_02723","SJAG_01075","SJAG_04039","SJAG_02778"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71206,72570,92402,104434,108527,112488,113679],"is_not":false,"summary":null,"term":"GO:0000183"},{"annotations":[77621,107017],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061188"}]},"cv_name":"biological_process","definition":"The formation of heterochromatin at ribosomal DNA, characterized by the modified histone H3K9me3.","definition_xrefs":["PMID:10219245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facultative heterochromatin formation","termid":"GO:0140718"},{"relation_name":"part_of","term_name":"nucleolar chromatin organization","termid":"GO:1990700"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00934":null,"SJAG_01075":null,"SJAG_01579":null,"SJAG_02723":null,"SJAG_02778":null,"SJAG_03255":null,"SJAG_03844":null,"SJAG_03982":null,"SJAG_04039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"rDNA heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-427413","Reactome:R-HSA-427359"],"synonyms":[{"name":"chromatin silencing at rDNA","type":"related"},{"name":"chromatin silencing at ribosomal DNA","type":"broad"},{"name":"heterochromatic silencing at rDNA","type":"broad"},{"name":"rDNA chromatin silencing","type":"broad"},{"name":"rDNA heterochromatin assembly","type":"exact"}],"termid":"GO:0000183","terms_by_termid":{"GO:0000183":null,"GO:0061188":null}}


id: PBO:0069463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 728, pseudogene","termid":"PBO:0069463"}


id: PBO:0041248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 146","termid":"PBO:0041248"}


id: PBO:0070070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 27, pseudogene","termid":"PBO:0070070"}


id: GO:0042793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of RNA from a plastid DNA template, usually by a specific plastid RNA polymerase.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"plastid transcription","synonyms":[{"name":"transcription from plastid promoter","type":"exact"}],"termid":"GO:0042793"}


id: GO:2001191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gamma-delta T cell activation involved in immune response.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation","termid":"GO:0046643"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"gamma-delta T cell activation involved in immune response","termid":"GO:0002290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gamma-delta T cell activation involved in immune response","synonyms":[{"name":"regulation of gamma-delta T cell activation during immune response","type":"related"},{"name":"regulation of gamma-delta T lymphocyte activation during immune response","type":"related"},{"name":"regulation of gamma-delta T-cell activation during immune response","type":"related"},{"name":"regulation of gamma-delta T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:2001191"}


id: FYPO:0005274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a meiotic cell cycle phase transition normally.","definition_xrefs":["PomBase:mah","GO:0044771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"},{"relation_name":"is_a","term_name":"abnormal cell cycle phase transition","termid":"FYPO:0005273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiotic cell cycle phase transition","termid":"FYPO:0005274"}


id: MONDO:0011710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"specific language impairment","termid":"MONDO:0000724"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific language impairment 1","secondary_identifiers":["MEDGEN:339804","UMLS:C1847614","OMIM:606711"],"synonyms":[{"name":"SLI1","type":"exact"},{"name":"specific language impairment 1","type":"exact"},{"name":"specific language impairment QTL, 1","type":"exact"},{"name":"specific language impairment quantitative trait locus on chromosome 16","type":"related"}],"termid":"MONDO:0011710","xrefs":{"Monarch":{"xref_id":"0011710"}}}


id: PBO:0067563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 716, pseudogene","termid":"PBO:0067563"}


id: PBO:0042937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroadherin","termid":"PBO:0042937"}


id: PBO:0001363
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.32","termid":"PBO:0001363"}


id: SO:0001694
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A restriction enzyme cleavage site whereby only one strand is cut.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_cleavage_junction","termid":"SO:0001688"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single_strand_restriction_enzyme_cleavage_site","synonyms":[{"name":"single strand restriction enzyme cleavage site","type":"related"}],"termid":"SO:0001694"}


id: GO:0006328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete AT binding (obsolete GO:0006328)","synonyms":[{"name":"AT binding","type":"exact"}],"termid":"GO:0006328"}


id: PBO:0090975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxo-5-alpha-steroid 4-dehydrogenase","termid":"PBO:0090975"}


id: GO:0019170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactaldehyde + NAD+ = methylglyoxal + NADH + H+.","definition_xrefs":["EC:1.1.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"methylglyoxal reductase (NADH) activity","secondary_identifiers":["RHEA:24528","MetaCyc:D-LACTALDEHYDE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"(R)-lactaldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"D-lactaldehyde dehydrogenase activity","type":"exact"},{"name":"methylglyoxal reductase (NADH-dependent) activity","type":"exact"},{"name":"methylglyoxal reductase activity","type":"exact"}],"termid":"GO:0019170"}


id: MONDO:0005698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinical diagnosis presenting with painless cervical dilatation and spontaneous mid-trimester birth in recurrent pregnancies in the absence of spontaneous membrane rupture, bleeding or clinical chorioamnionitis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical incompetence","secondary_identifiers":["DOID:9681","EFO:0007202","MESH:D002581","ICD9:654.50","MEDGEN:2972","UMLS:C0007871","ICD9:622.5","SCTID:17382005"],"termid":"MONDO:0005698","xrefs":{"Monarch":{"xref_id":"0005698"}}}


id: PBO:0063179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX1 antisense RNA 1","termid":"PBO:0063179"}


id: PR:Q9P7Q9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alg9 gene.","definition_xrefs":["UniProtKB:Q9P7Q9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase alg9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.05","synonyms":[{"name":"Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-alg9","type":"exact"},{"name":"asparagine-linked glycosylation protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7Q9"}


id: PBO:0038414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_transports_or_maintains_localization_of","termid":"PBO:0038414"}


id: FYPO:0002961
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the fungal-type cell wall is delaminated, i.e. one or more of its layers peels off, when the cell is in G0 phase.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delaminated cell wall","termid":"FYPO:0002948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002946"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002946","FYPO:0000002"],"is_obsolete":false,"name":"delaminated cell wall during G0","synonyms":[{"name":"delaminate cell wall during G0","type":"exact"},{"name":"delaminated cell wall during G0","type":"related"},{"name":"delaminated cell wall during cell quiescence","type":"exact"},{"name":"delaminated cell wall during quiescence","type":"exact"}],"termid":"FYPO:0002961"}


id: PBO:0082905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cystathionine gamma-lyase; catalyzes one of the two reactions involved in the transsulfuration pathway that yields cysteine from homocysteine with the intermediary formation of cystathionine; protein abundance increases in response to DNA replication stress","termid":"PBO:0082905"}


id: GO:0022019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of dorsal lateral ganglionic eminence cells, resulting in the expansion of the cell population.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"},{"relation_name":"part_of","term_name":"lateral ganglionic eminence cell proliferation","termid":"GO:0022018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal lateral ganglionic eminence cell proliferation","termid":"GO:0022019"}


id: MONDO:0002339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemangioma (obsolete MONDO:0002339)","termid":"MONDO:0002339","xrefs":{"Monarch":{"xref_id":"0002339"}}}


id: MONDO:0009022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality characterized by the complete absence of the corpus callosum. It may be an isolated abnormality or associated with other central nervous system abnormalities or syndromes. Clinical manifestations vary. In cases of isolated corpus callosum agenesis, symptoms may be absent or minimal. In cases that are associated with other central nervous system abnormalities or syndromes, symptoms include developmental delays, motor coordination difficulties, and vision impairment.","definition_xrefs":["NCIT:C98905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"corpus callosum, agenesis of","secondary_identifiers":["MEDGEN:104498","SCTID:5102002","OMIM:217990","UMLS:C0175754","MESH:D061085","Orphanet:200"],"synonyms":[{"name":"ACC","type":"related"},{"name":"agenesis of corpus callosum","type":"exact"},{"name":"agenesis of the corpus callosum","type":"related"},{"name":"corpus callosum agenesis","type":"exact"},{"name":"corpus callosum, agenesis of","type":"exact"},{"name":"isolated corpus callosum agenesis","type":"related"}],"termid":"MONDO:0009022","xrefs":{"Monarch":{"xref_id":"0009022"}}}


id: GO:0033310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the breakdown of chlorophyll a.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll catabolic process","termid":"GO:0015996"},{"relation_name":"is_a","term_name":"chlorophyll a metabolic process","termid":"GO:0033304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"chlorophyll a catabolic process","secondary_identifiers":["MetaCyc:PWY-5098"],"synonyms":[{"name":"chlorophyll a breakdown","type":"exact"},{"name":"chlorophyll a catabolism","type":"exact"},{"name":"chlorophyll a degradation","type":"exact"}],"termid":"GO:0033310"}


id: PBO:0054226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1608","termid":"PBO:0054226"}


id: GO:1904580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intracellular mRNA localization.","definition_xrefs":["PMID:21471000","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"intracellular mRNA localization","termid":"GO:0008298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular mRNA localization","synonyms":[{"name":"regulation of establishment and maintenance of intracellular RNA localization","type":"exact"},{"name":"regulation of intracellular mRNA localisation","type":"exact"},{"name":"regulation of intracellular mRNA positioning","type":"narrow"},{"name":"regulation of mRNA localization, intracellular","type":"exact"},{"name":"regulation of mRNA positioning, intracellular","type":"narrow"}],"termid":"GO:1904580"}


id: FYPO:0001084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of alpha-D-glucan measured in the cell wall is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell wall polysaccharide level","termid":"FYPO:0004859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cell wall alpha-glucan level","synonyms":[{"name":"increased cell wall alpha-D-glucan level","type":"exact"},{"name":"increased cell wall alpha-glucan accumulation","type":"related"},{"name":"increased cell wall alpha-glucan level during mitotic cell cycle","type":"related"},{"name":"increased cell wall alpha-glucan level during vegetative growth","type":"exact"}],"termid":"FYPO:0001084"}


id: GO:0021691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar Purkinje cell layer to attain its fully functional state. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:dph","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer development","termid":"GO:0021680"},{"relation_name":"part_of","term_name":"cerebellar cortex maturation","termid":"GO:0021699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer maturation","termid":"GO:0021691"}


id: PATO:0000163
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000163 relative rate (obsolete PATO:0000163)","termid":"PATO:0000163"}


id: GO:0048407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to platelet-derived growth factor.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"platelet-derived growth factor binding","synonyms":[{"name":"PDGF binding","type":"exact"}],"termid":"GO:0048407"}


id: PBO:0004983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene (predicted)","termid":"PBO:0004983"}


id: PBO:0059809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 35","termid":"PBO:0059809"}


id: GO:0018612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dibenzothiophene + NADH + O2 + H+ = NAD+ + cis-1,2-dihydroxy-1,2-dihydrodibenzothiophene.","definition_xrefs":["UM-BBD_reactionID:r0160"],"gene_count":0,"genotype_count":0,"name":"obsolete dibenzothiophene dioxygenase activity (obsolete GO:0018612)","termid":"GO:0018612"}


id: GO:1904884
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of telomerase catalytic core complex assembly.","definition_xrefs":["GOC:BHF_telomere","GO_REF:0000058","GOC:BHF","GOC:rph","GOC:TermGenie","PMID:26586433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of telomerase catalytic core complex assembly","termid":"GO:1904882"},{"relation_name":"positively_regulates","term_name":"telomerase catalytic core complex assembly","termid":"GO:1904868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of telomerase catalytic core complex assembly","synonyms":[{"name":"activation of TERT-TERC complex assembly","type":"related"},{"name":"activation of TERT-TERC complex formation","type":"related"},{"name":"activation of telomerase catalytic core complex assembly","type":"narrow"},{"name":"activation of telomerase catalytic core complex formation","type":"narrow"},{"name":"positive regulation of TERT-TERC complex assembly","type":"related"},{"name":"positive regulation of TERT-TERC complex formation","type":"related"},{"name":"positive regulation of telomerase catalytic core complex formation","type":"exact"},{"name":"up regulation of TERT-TERC complex assembly","type":"related"},{"name":"up regulation of TERT-TERC complex formation","type":"related"},{"name":"up regulation of telomerase catalytic core complex assembly","type":"exact"},{"name":"up regulation of telomerase catalytic core complex formation","type":"exact"},{"name":"up-regulation of TERT-TERC complex assembly","type":"related"},{"name":"up-regulation of TERT-TERC complex formation","type":"related"},{"name":"up-regulation of telomerase catalytic core complex assembly","type":"exact"},{"name":"up-regulation of telomerase catalytic core complex formation","type":"exact"},{"name":"upregulation of TERT-TERC complex assembly","type":"related"},{"name":"upregulation of TERT-TERC complex formation","type":"related"},{"name":"upregulation of telomerase catalytic core complex assembly","type":"exact"},{"name":"upregulation of telomerase catalytic core complex formation","type":"exact"}],"termid":"GO:1904884"}


id: PBO:0017672
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium ion channel Cch1","termid":"PBO:0017672"}


id: PBO:0088113
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aspartate and glutamate exporter; member of a family of seven genes (AVT1-7) related to vesicular GABA-glycine transporters; involved in compartmentalizing acidic amino acids in response to nitrogen starvation; AVT6 has a paralog, AVT5, that arose from the whole genome duplication","termid":"PBO:0088113"}


id: GO:0036043
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id: PBO:0110969
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3126","termid":"PBO:0110969"}


id: MONDO:0000290
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A infectious disease involving the Naegleria fowleri.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"},{"relation_name":"is_a","term_name":"infectious encephalitis","termid":"MONDO:0020067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary amebic meningoencephalitis","secondary_identifiers":["DOID:0050242","MEDGEN:81253","MESH:C535275","GARD:9554","SCTID:721816008","UMLS:C0300934"],"synonyms":[{"name":"Naegleria fowleri infection","type":"exact"},{"name":"infections, Naegleria fowleri","type":"related"}],"termid":"MONDO:0000290","xrefs":{"Monarch":{"xref_id":"0000290"}}}


id: GO:1905018
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of methionine-tRNA ligase activity.","definition_xrefs":["GO_REF:0000059","PMID:1665486","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of methionine-tRNA ligase activity (obsolete GO:1905018)","synonyms":[{"name":"regulation of L-methionine:tRNAMet ligase (AMP-forming)","type":"exact"},{"name":"regulation of MetRS activity","type":"exact"},{"name":"regulation of methionine translase activity","type":"exact"},{"name":"regulation of methionyl-tRNA synthetase activity","type":"exact"},{"name":"regulation of methionyl-transfer RNA synthetase activity","type":"exact"},{"name":"regulation of methionyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"regulation of methionyl-transfer ribonucleic acid synthetase activity","type":"exact"}],"termid":"GO:1905018"}


id: PBO:0039958
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 1","termid":"PBO:0039958"}


id: MONDO:1012110
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  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypoadrenocorticism, non-human animal","termid":"MONDO:1011675"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoadrenocorticism, domestic cat","secondary_identifiers":["OMIA:000519-9685"],"termid":"MONDO:1012110","xrefs":{"Monarch":{"xref_id":"1012110"}}}


id: PBO:0013113
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  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ortholog of G4-Associated protein","termid":"PBO:0013113"}


id: PBO:0091601
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  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was originally annotated as SPNCRNA.263 on the forward strand, from non-strand specific data","termid":"PBO:0091601"}


id: FYPO:0000433
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of fermentation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal fermentation","termid":"FYPO:0000430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased fermentation","synonyms":[{"name":"fermentative metabolism: increased","type":"related"},{"name":"increased fermentation during mitotic cell cycle","type":"related"},{"name":"increased fermentation during vegetative growth","type":"exact"},{"name":"increased fermentative metabolism","type":"exact"}],"termid":"FYPO:0000433"}


id: PBO:0051438
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-22","termid":"PBO:0051438"}


id: PBO:0036407
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 2 Mtx2 (predicted)","termid":"PBO:0036407"}


id: PBO:0071670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 2","termid":"PBO:0071670"}


id: PBO:0084844
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; has similarity to E. coli L7/L12 and human MRPL7 ribosomal proteins; associates with the mitochondrial nucleoid; required for normal respiratory growth","termid":"PBO:0084844"}


id: PBO:0086199
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; expression may be cell cycle-regulated","termid":"PBO:0086199"}


id: MONDO:0800113
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of vasculitis that is comprised of vasculitides that present with necrosis.","definition_xrefs":["PMID:637044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necrotizing vasculitis","secondary_identifiers":["NCIT:C70635","UMLS:C1318520","MEDGEN:230813"],"synonyms":[{"name":"systemic vasculitis","type":"exact"}],"termid":"MONDO:0800113","xrefs":{"Monarch":{"xref_id":"0800113"}}}


id: PBO:0004768
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Vti1 (predicted)","termid":"PBO:0004768"}


id: GO:0016053
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synthesis","type":"exact"}],"termid":"GO:0016053","terms_by_termid":{"GO:0000105":null,"GO:0000162":null,"GO:0006532":null,"GO:0006535":null,"GO:0006542":null,"GO:0006545":null,"GO:0006564":null,"GO:0006571":null,"GO:0006592":null,"GO:0006633":null,"GO:0006636":null,"GO:0006761":null,"GO:0006780":null,"GO:0008153":null,"GO:0009073":null,"GO:0009086":null,"GO:0009088":null,"GO:0009090":null,"GO:0009094":null,"GO:0009098":null,"GO:0009099":null,"GO:0009102":null,"GO:0009107":null,"GO:0009257":null,"GO:0009423":null,"GO:0015940":null,"GO:0019240":null,"GO:0019249":null,"GO:0019264":null,"GO:0019280":null,"GO:0019284":null,"GO:0019344":null,"GO:0019367":null,"GO:0019509":null,"GO:0019878":null,"GO:0030497":null,"GO:0034625":null,"GO:0042450":null,"GO:0042759":null,"GO:0042761":null,"GO:0042852":null,"GO:0045717":null,"GO:0046656":null,"GO:0052699":null,"GO:0055129":null,"GO:0070981":null,"GO:0071266":null,"GO:0071269":null,"GO:0097054":null,"GO:1900535":null,"GO:1901705":null}}


id: PBO:0003913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-3-methyladenine glycosidase Mag2","termid":"PBO:0003913"}


id: GO:0000193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAP kinase activity in the context of regulating pseudohyphal or invasive growth.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK (pseudohyphal growth) (obsolete GO:0000193)","synonyms":[{"name":"activation of MAPK (pseudohyphal growth)","type":"exact"}],"termid":"GO:0000193"}


id: PBO:0077294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 37","termid":"PBO:0077294"}


id: MONDO:0030463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 58","secondary_identifiers":["OMIM:619585","UMLS:C5562008","DOID:0112352","MEDGEN:1794218"],"synonyms":[{"name":"SPGF58","type":"exact"}],"termid":"MONDO:0030463","xrefs":{"Monarch":{"xref_id":"0030463"}}}


id: MOD:00856
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to an L-alaninium (protonated L-alanine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-alanine (L-alaninium) residue","termid":"MOD:00856"}


id: PomGeneEx:0000017
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRNA","definition":"A gene expression qualifier that indicates that an RNA is present at levels that vary under two or more sets of conditions or over a time course.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluctuates","termid":"PomGeneEx:0000008"},{"relation_name":"is_a","term_name":"RNA expression level","termid":"PomGeneEx:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA level fluctuates","synonyms":[{"name":"RNA expression fluctuates","type":"exact"},{"name":"fluctuating RNA level","type":"exact"}],"termid":"PomGeneEx:0000017"}


id: GO:0002905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mature B cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"regulates","term_name":"mature B cell apoptotic process","termid":"GO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mature B cell apoptotic process","synonyms":[{"name":"regulation of mature B cell apoptosis","type":"narrow"}],"termid":"GO:0002905"}


id: GO:1990485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactate (2-hydroxypropanoic acid) in the absence of oxygen.","definition_xrefs":["PMID:11133436","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate catabolic process","termid":"GO:1903457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"anaerobic lactate catabolic process","synonyms":[{"name":"anaerobic lactic acid catabolic process","type":"related"}],"termid":"GO:1990485"}


id: PBO:0062852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoferlin","termid":"PBO:0062852"}


id: GO:0140720
data:
  {"annotated_genes":["SJAG_03997","SJAG_03916","SJAG_03543","SJAG_03418","SJAG_02778","SJAG_03042","SJAG_00302","SJAG_03945","SJAG_04186","SJAG_01601","SJAG_00335","SJAG_03982","SJAG_03664","SJAG_01540","SJAG_02621","SJAG_03356","SJAG_03680","SJAG_01046","SJAG_02401","SJAG_00678","SJAG_01579","SJAG_03685","SJAG_00756","SJAG_02119","SJAG_03844","SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91248,91597,92399,94158,94406,96491,97057,99448,99895,103564,104430,104529,110855,112484,112588,112992,112993,112994,113674,114369,116329,117514,118087,118145,118492,119216],"is_not":false,"summary":null,"term":"GO:0140720"}]},"cv_name":"cellular_component","definition":"Heterochromatin that is located adjacent to the telomere, and characterized by methylated H3 histone at lysine 9 (H3K9me2/H3K9me3).","definition_xrefs":["PMID:34576871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"},{"relation_name":"part_of","term_name":"chromosome, subtelomeric region","termid":"GO:0099115"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00302":null,"SJAG_00335":null,"SJAG_00678":null,"SJAG_00756":null,"SJAG_01046":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_02119":null,"SJAG_02401":null,"SJAG_02621":null,"SJAG_02778":null,"SJAG_03042":null,"SJAG_03356":null,"SJAG_03418":null,"SJAG_03543":null,"SJAG_03664":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04186":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"subtelomeric heterochromatin","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140720","terms_by_termid":{"GO:0140720":null}}


id: PBO:0071285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 8","termid":"PBO:0071285"}


id: PBO:0026959
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_telomere_localization_during_mitotic_interphase","termid":"PBO:0026959"}


id: PBO:0038483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 8","termid":"PBO:0038483"}


id: PBO:0059016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMP2 antisense RNA 1","termid":"PBO:0059016"}


id: GO:0007484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the genitalia over time, from formation as part of the genital disc to the mature structure. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:ai","GOC:sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia development","termid":"GO:0048806"},{"relation_name":"part_of","term_name":"genital disc development","termid":"GO:0035215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived genitalia development","synonyms":[{"name":"genital development","type":"broad"}],"termid":"GO:0007484"}


id: PBO:0060782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B10","termid":"PBO:0060782"}


id: PBO:0081523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 432","termid":"PBO:0081523"}


id: GO:0046525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + O-beta-D-xylosylprotein = UDP + 4-beta-D-galactosyl-O-beta-D-xylosylprotein.","definition_xrefs":["EC:2.4.1.133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"xylosylprotein 4-beta-galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1889981","RHEA:15297","MetaCyc:2.4.1.133-RXN","Reactome:R-HSA-3560804"],"synonyms":[{"name":"UDP-D-galactose:D-xylose galactosyltransferase activity","type":"related"},{"name":"UDP-D-galactose:xylose galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:O-beta-D-xylosylprotein 4-beta-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:xylose galactosyltransferase activity","type":"exact"},{"name":"UDPgalactose:O-beta-D-xylosylprotein 4-beta-D-galactosyltransferase activity","type":"related"},{"name":"galactosyltransferase I activity","type":"related"},{"name":"uridine diphosphogalactose-xylose galactosyltransferase activity","type":"related"}],"termid":"GO:0046525"}


id: PBO:0081801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 730","termid":"PBO:0081801"}


id: PBO:0056348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 6","termid":"PBO:0056348"}


id: PBO:0050042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, E","termid":"PBO:0050042"}


id: GO:0048771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reorganization or renovation of existing tissues. This process can either change the characteristics of a tissue such as in blood vessel remodeling, or result in the dynamic equilibrium of a tissue such as in bone remodeling.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue remodeling","synonyms":[{"name":"tissue remodelling","type":"exact"}],"termid":"GO:0048771"}


id: GO:0030173
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the Golgi membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of Golgi membrane (obsolete GO:0030173)","synonyms":[{"name":"Golgi integral membrane protein","type":"related"},{"name":"integral to Golgi membrane","type":"narrow"}],"termid":"GO:0030173"}


id: PBO:0076650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 5","termid":"PBO:0076650"}


id: PBO:0071874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 12","termid":"PBO:0071874"}


id: FYPO:0002462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, septated, and elongated.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"branched, elongated, septated cell","termid":"FYPO:0004594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0000005"],"is_obsolete":false,"name":"inviable branched, elongated vegetative cell","secondary_identifiers":["FYPO:0002461"],"synonyms":[{"name":"inviable branched cell during vegetative growth","type":"exact"},{"name":"inviable branched vegetative cell","type":"exact"},{"name":"inviable branched vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated cell during vegetative growth","type":"exact"},{"name":"inviable branched, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated, septated cell","type":"exact"},{"name":"inviable branched, long, septated cell","type":"exact"},{"name":"inviable branched, septated cell","type":"exact"},{"name":"inviable elongated branched cell","type":"exact"},{"name":"lethal; branched, elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002462"}


id: PBO:0013815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige protein homolog Lvs1 (predicted)","termid":"PBO:0013815"}


id: GO:0004987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an opioid to initiate a change in cell activity, with the pharmacological characteristics of kappa-opioid receptors, including high affinity for dynorphins.","definition_xrefs":["IUPHAR_RECEPTOR:318"],"gene_count":0,"genotype_count":0,"name":"obsolete kappa-opioid receptor activity (obsolete GO:0004987)","secondary_identifiers":["Wikipedia:Kappa_Opioid_receptor"],"synonyms":[{"name":"kappa-opioid receptor activity","type":"exact"}],"termid":"GO:0004987"}


id: PBO:0058775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7109","termid":"PBO:0058775"}


id: GO:0016074
data:
  {"annotated_genes":["SJAG_04942","SJAG_04768","SJAG_04153","SJAG_01521","SJAG_01176","SJAG_00943","SJAG_06613","SJAG_00854","SJAG_04321","SJAG_03234","SJAG_02350","SJAG_02553","SJAG_03984","SJAG_03179","SJAG_01191","SJAG_00752","SJAG_02382","SJAG_04527","SJAG_01369","SJAG_03112","SJAG_04754","SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118062],"is_not":false,"summary":null,"term":"GO:0016074"},{"annotations":[73689,110569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000494"},{"annotations":[102506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106410"},{"annotations":[80448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"},{"annotations":[115694,113872,105125,91413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034965"},{"annotations":[70711,71271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071036"},{"annotations":[75435,115836,73592,71277,74723,76672,78039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071051"},{"annotations":[93157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031126"},{"annotations":[88699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016077"},{"annotations":[91123,87819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043144"},{"annotations":[75894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034247"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving snoRNA, small nucleolar RNA, any of a class of small RNAs that are associated with the eukaryotic nucleus as components of small nucleolar ribonucleoproteins. They participate in the processing or modifications of many RNAs, mostly ribosomal RNAs (rRNAs) though snoRNAs are also known to target other classes of RNA, including spliceosomal RNAs, tRNAs, and mRNAs via a stretch of sequence that is complementary to a sequence in the targeted RNA.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00752":null,"SJAG_00854":null,"SJAG_00943":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01369":null,"SJAG_01521":null,"SJAG_02350":null,"SJAG_02382":null,"SJAG_02553":null,"SJAG_03112":null,"SJAG_03179":null,"SJAG_03234":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04527":null,"SJAG_04754":null,"SJAG_04768":null,"SJAG_04942":null,"SJAG_06613":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sno(s)RNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"box C/D sRNA metabolic process","type":"narrow"},{"name":"snoRNA metabolism","type":"narrow"}],"termid":"GO:0016074","terms_by_termid":{"GO:0000494":null,"GO:0000495":null,"GO:0016074":null,"GO:0016077":null,"GO:0031126":null,"GO:0034247":null,"GO:0034965":null,"GO:0043144":null,"GO:0071036":null,"GO:0071051":null,"GO:0106410":null}}


id: MONDO:0956979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic asthma that is characterized by significant decline in pulmonary function and increase of airway inflammation at night. During sleep, recumbent posture causes a reduction in the lung volumes, respiratory muscle tone, and lung compliance. The overnight physiological abnormalities include: increased airway inflammation and decreased steroid responsiveness, increased pulmonary capillary blood volume, functional differences in blood/air volume ratios and mechanical coupling of the parenchyma to the airways.","definition_xrefs":["DOID:0080826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic asthma","termid":"MONDO:0850282"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nocturnal asthma","termid":"MONDO:0956979","xrefs":{"Monarch":{"xref_id":"0956979"}}}


id: MONDO:1011019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"L-2-hydroxyglutaricacidemia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-2-hydroxyglutaricacidemia, non-human animal","termid":"MONDO:1010244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2-hydroxyglutaricacidemia, domestic cat","secondary_identifiers":["OMIA:001371-9685"],"termid":"MONDO:1011019","xrefs":{"Monarch":{"xref_id":"1011019"}}}


id: PBO:0082491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic component of UDP-GlcNAc transferase; required for the second step of dolichyl-linked oligosaccharide synthesis; anchored to the ER membrane via interaction with Alg14p; similar to bacterial and human glycosyltransferases; protein abundance increases in response to DNA replication stress; both human homologs ALG13 and ALG14 are required to complement yeast alg13 mutant","termid":"PBO:0082491"}


id: MONDO:0022308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A progressive neurodegenerative condition affecting the cerebral cortex and basal ganglia. The disorder is characterized by varying degrees of cognitive and motor impairment.","definition_xrefs":["NCIT:C129069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cerebral degeneration","termid":"MONDO:0024238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"corticobasal degeneration disorder","secondary_identifiers":["UMLS:C0393570","MEDGEN:95979","NANDO:1200011","SCTID:18842008"],"synonyms":[{"name":"CBGD","type":"related"},{"name":"cortical basal ganglionic degeneration","type":"exact"},{"name":"cortical-basal ganglionic degeneration","type":"related"},{"name":"cortico-basal ganglionic Degeneration (CBGD)","type":"related"},{"name":"corticobasal degeneration","type":"exact"},{"name":"corticobasal syndrome","type":"related"},{"name":"corticodentatonigral degeneration with neuronal achromasia","type":"related"}],"termid":"MONDO:0022308","xrefs":{"Monarch":{"xref_id":"0022308"}}}


id: MONDO:0005858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive adenocarcinoma characterized by cystic changes and the presence of malignant glandular cells which contain intracytoplasmic mucin. It may arise from the ovary, pancreas, appendix, and lung.","definition_xrefs":["NCIT:C3776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"},{"relation_name":"is_a","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mucinous cystadenocarcinoma","secondary_identifiers":["EFO:0007378","ICDO:8470/3","MEDGEN:60211","MESH:D018282","UMLS:C0206699","DOID:3603"],"synonyms":[{"name":"Pseudomucinous adenocarcinoma","type":"exact"},{"name":"Pseudomucinous cystadenocarcinoma","type":"exact"},{"name":"mucinous cystadenocarcinoma","type":"exact"},{"name":"mucinous cystadenocarcinoma (morphologic abnormality)","type":"exact"},{"name":"mucinous cystadenocarcinoma NOS (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0005858","xrefs":{"Monarch":{"xref_id":"0005858"}}}


id: GO:0018975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene, a highly explosive pale yellow crystalline solid, that occur in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4,6-trinitrotoluene metabolic process","termid":"GO:0018974"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic 2,4,6-trinitrotoluene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:tnt2"],"synonyms":[{"name":"anaerobic 2,4,6-trinitrotoluene metabolism","type":"exact"}],"termid":"GO:0018975"}


id: MONDO:0020241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete unclassified familial retinal dystrophy (obsolete MONDO:0020241)","secondary_identifiers":["Orphanet:98662"],"termid":"MONDO:0020241","xrefs":{"Monarch":{"xref_id":"0020241"}}}


id: GO:0016946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Cleavage of substrates with Phe and Leu in P2.","definition_xrefs":["EC:3.4.22.41"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin F activity (obsolete GO:0016946)","synonyms":[{"name":"cathepsin F activity","type":"exact"}],"termid":"GO:0016946"}


id: PBO:0045613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 24 (pseudogene)","termid":"PBO:0045613"}


id: GO:0022624
data:
  {"annotated_genes":["SJAG_00766","SJAG_01203","SJAG_01131","SJAG_03408","SJAG_04477","SJAG_00762","SJAG_04144","SJAG_03638","SJAG_01544","SJAG_00738","SJAG_00712","SJAG_04211","SJAG_03321","SJAG_04572","SJAG_01652","SJAG_01489","SJAG_02992","SJAG_04088","SJAG_02900","SJAG_04484"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78470,73996,73464,80185,79908,79459,78745,77408,78288],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008540"},{"annotations":[115542,79675,73176,76806,62654,101991,74607,99280,74594,71668,78509,111605],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008541"}]},"cv_name":"cellular_component","definition":"A protein complex, that caps one or both ends of the proteasome core complex and regulates entry into, or exit from, the proteasome core complex.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome complex","termid":"GO:0000502"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00712":null,"SJAG_00738":null,"SJAG_00762":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01203":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_01652":null,"SJAG_02900":null,"SJAG_02992":null,"SJAG_03321":null,"SJAG_03408":null,"SJAG_03638":null,"SJAG_04088":null,"SJAG_04144":null,"SJAG_04211":null,"SJAG_04477":null,"SJAG_04484":null,"SJAG_04572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome accessory complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0022624","terms_by_termid":{"GO:0008540":null,"GO:0008541":null}}


id: PBO:0064067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 101","termid":"PBO:0064067"}


id: MONDO:1012493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined deficiency of factors VIII, IX, and X, non-human animal","termid":"MONDO:1011705"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combined deficiency of factors VIII, IX, and X, horse","secondary_identifiers":["OMIA:001983-9796"],"termid":"MONDO:1012493","xrefs":{"Monarch":{"xref_id":"1012493"}}}


id: GO:0061956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The infiltration by sperm of the cumulus oophorus to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm.","definition_xrefs":["PMID:21380641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration of cumulus oophorus","synonyms":[{"name":"penetration of cumulus cells layer","type":"exact"},{"name":"penetration of cumulus mass","type":"exact"}],"termid":"GO:0061956"}


id: PR:O74438
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.08c","synonyms":[{"name":"Spom972h-mcp2","type":"exact"}],"termid":"PR:O74438"}


id: GO:0015479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete outer membrane exporter porin (obsolete GO:0015479)","synonyms":[{"name":"outer membrane exporter porin","type":"exact"}],"termid":"GO:0015479"}


id: MONDO:1011465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis that occurs in black-footed ferret.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloidosis, non-human animal","termid":"MONDO:1011415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis, black-footed ferret","secondary_identifiers":["OMIA:000037-77151"],"termid":"MONDO:1011465","xrefs":{"Monarch":{"xref_id":"1011465"}}}


id: MONDO:0036217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia, hypotonia, and respiratory insufficiency syndrome, neonatal lethal","termid":"MONDO:0032931"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal pontocerebellar hypoplasia-hypotonia-respiratory insufficiency syndrome due to a point mutation","secondary_identifiers":["GARD:18036","MEDGEN:1842868","UMLS:C5681819","Orphanet:615983"],"termid":"MONDO:0036217","xrefs":{"Monarch":{"xref_id":"0036217"}}}


id: PBO:0049823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HD domain containing 2","termid":"PBO:0049823"}


id: MONDO:0009440
data:
  {"annotated_genes":["SJAG_04565","SJAG_00104"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86064,86065],"is_not":false,"summary":null,"term":"MONDO:0009440"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"KID syndrome","termid":"MONDO:0018781"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_04565":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosiform erythroderma, corneal involvement, and hearing loss","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1275089","OMIM:242150","SCTID:403780007","MESH:C537363","GARD:2946","MEDGEN:224809"],"synonyms":[{"name":"Desmons syndrome","type":"related"},{"name":"KID syndrome, autosomal recessive","type":"related"},{"name":"ichthyosiform erythroderma, corneal involvement, and deafness","type":"narrow"},{"name":"ichthyosiform erythroderma, corneal involvement, deafness","type":"related"},{"name":"keratitis-ichthyosis-deafness syndrome, autosomal recessive","type":"related"}],"termid":"MONDO:0009440","terms_by_termid":{"MONDO:0009440":null},"xrefs":{"Monarch":{"xref_id":"0009440"}}}


id: GO:1901514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + lipo-chitin oligosaccharide(in) = ADP + phosphate + lipo-chitin oligosaccharide(out).","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"},{"relation_name":"is_a","term_name":"lipo-chitin oligosaccharide transmembrane transporter activity","termid":"GO:1901513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled lipo-chitin oligosaccharide transmembrane transporter activity","synonyms":[{"name":"lipo-chitin oligosaccharide transmembrane-transporting ATPase activity","type":"related"}],"termid":"GO:1901514"}


id: MONDO:0012599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential hypertension","termid":"MONDO:0001134"},{"relation_name":"excluded_subClassOf","term_name":"essential hypertension, genetic","termid":"MONDO:0007781"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertension, essential, susceptibility to, 8","secondary_identifiers":["OMIM:611014","UMLS:C1970244","MEDGEN:369687"],"synonyms":[{"name":"HYT8","type":"exact"},{"name":"hypertension, essential, susceptibility to, 8","type":"exact"}],"termid":"MONDO:0012599","xrefs":{"Monarch":{"xref_id":"0012599"}}}


id: GO:0030232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex that binds to the insulin control element (ICE), a DNA sequence element found within the 5'-flanking region of the insulin gene, and activates ICE-mediated transcription.","definition_xrefs":["PMID:7935390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"insulin control element activator complex","synonyms":[{"name":"ICE activator complex","type":"exact"}],"termid":"GO:0030232"}


id: GO:0140745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transcription of a small interfering RNA from an RNA template.","definition_xrefs":["PMID:23001036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-templated transcription","termid":"GO:0001172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"siRNA transcription","termid":"GO:0140745"}


id: MONDO:0004438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the breast and is not caused by inherited genetic mutations.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma","termid":"MONDO:0004989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sporadic breast cancer","secondary_identifiers":["UMLS:C1336076","DOID:8029","NCIT:C7566","MEDGEN:233463"],"synonyms":[{"name":"sporadic breast cancer","type":"exact"},{"name":"sporadic breast carcinoma","type":"exact"}],"termid":"MONDO:0004438","xrefs":{"Monarch":{"xref_id":"0004438"}}}


id: PBO:0091436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP-dependent oxidoreductase, implicated in cellular detoxification","termid":"PBO:0091436"}


id: MONDO:0017610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa simplex (EBS) is a group of hereditary epidermolysis bullosa (HEB) disorders characterized by skin fragility resulting in intraepidermal blisters and erosions that occur either spontaneously or after physical trauma.","definition_xrefs":["Orphanet:304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited epidermolysis bullosa","termid":"MONDO:0019276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex","secondary_identifiers":["OMIMPS:131760","SCTID:67144006","UMLS:C0079298","GARD:10752","ICD10CM:Q81.0","icd11.foundation:1860717527","MEDGEN:86896","DOID:4644","ICD9:757.39","MESH:D016110","NANDO:2201375","NANDO:2201341","NANDO:1200235","NCIT:C84692"],"synonyms":[{"name":"EBS","type":"exact"},{"name":"EEB","type":"exact"},{"name":"epidermolysis bullosa intraepidermic","type":"related"},{"name":"epidermolysis bullosa simplex","type":"exact"}],"termid":"MONDO:0017610","xrefs":{"Monarch":{"xref_id":"0017610"}}}


id: SO:0002234
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cis-acting element involved in RNA stability found in the 3' UTR of some RNA (consensus UGUAAAUA).","definition_xrefs":["PMID:30601114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR_region","termid":"SO:0000837"},{"relation_name":"part_of","term_name":"three_prime_UTR","termid":"SO:0000205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio_response_element","synonyms":[{"name":"PRE binding RNA","type":"exact"},{"name":"pumilio response element","type":"exact"}],"termid":"SO:0002234"}


id: MONDO:0006662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the membranes surrounding the brain and spinal cord without a bacterial pathogen.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"viral meningitis","termid":"MONDO:0007015"},{"relation_name":"is_a","term_name":"meningitis","termid":"MONDO:0021108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aseptic meningitis","secondary_identifiers":["EFO:1000823","UMLS:C0025290","MESH:D008582","NCIT:C118299","MEDGEN:7534","SCTID:301770000","DOID:12157","MedDRA:10003458","icd11.foundation:453360366"],"synonyms":[{"name":"acute aseptic meningitis","type":"exact"},{"name":"aseptic meningitis","type":"exact"}],"termid":"MONDO:0006662","xrefs":{"Monarch":{"xref_id":"0006662"}}}


id: PBO:0071532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 35","termid":"PBO:0071532"}


id: PBO:0080444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and immunoglobulin domain containing 1","termid":"PBO:0080444"}


id: GO:0046713
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140159"}]},"cv_name":"biological_process","definition":"The directed movement of borate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Borate is the anion (BO3)3-; boron is a group 13 element, with properties which are borderline between metals and non-metals.","definition_xrefs":["PMID:21710975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"borate transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"boron transport","type":"related"}],"termid":"GO:0046713","terms_by_termid":{"GO:0140159":null}}


id: PBO:0003636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh5 (predicted)","termid":"PBO:0003636"}


id: PBO:0061793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 4","termid":"PBO:0061793"}


id: FYPO:0001737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of pantothenate into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal pantothenate import","synonyms":[{"name":"abnormal pantothenate import across plasma membrane","type":"exact"},{"name":"abnormal pantothenate import during mitotic cell cycle","type":"related"},{"name":"abnormal pantothenate import during vegetative growth","type":"exact"},{"name":"abnormal pantothenate import into cell","type":"exact"},{"name":"abnormal pantothenate uptake","type":"exact"},{"name":"abnormal pantothenic acid import","type":"related"}],"termid":"FYPO:0001737"}


id: GO:0018297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FAD linkage via 1'-(8-alpha-FAD)-L-histidine.","definition_xrefs":["RESID:AA0221"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FAD linkage via 1'-(8alpha-FAD)-L-histidine (obsolete GO:0018297)","termid":"GO:0018297"}


id: PBO:0018260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyphosphate synthetase, VTC complex subunit Vtc2/3 (predicted)","termid":"PBO:0018260"}


id: PBO:0046444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epsin 3","termid":"PBO:0046444"}


id: FYPO:0007505
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more specific promoter elements is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin","termid":"FYPO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to chromatin at promoter","synonyms":[{"name":"decreased protein localisation to chromatin at promoter","type":"exact"},{"name":"decreased protein localization to chromatin at promoter during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at promoter during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at promoter","type":"exact"}],"termid":"FYPO:0007505"}


id: GO:1905038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane lipid metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:25954280","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"regulates","term_name":"membrane lipid metabolic process","termid":"GO:0006643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of membrane lipid metabolic process","synonyms":[{"name":"regulation of membrane lipid metabolism","type":"exact"}],"termid":"GO:1905038"}


id: PBO:0064763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase F","termid":"PBO:0064763"}


id: PBO:0108762
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ageing-Associated LncRNA","termid":"PBO:0108762"}


id: GO:1901381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of potassium ion transmembrane transport.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of potassium ion transport","termid":"GO:0043268"},{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transport","termid":"GO:1901379"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"positively_regulates","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of potassium ion transmembrane transport","secondary_identifiers":["Reactome:R-HSA-1296041","Reactome:R-HSA-1296052"],"synonyms":[{"name":"activation of potassium ion transmembrane transport","type":"narrow"},{"name":"positive regulation of potassium ion membrane transport","type":"exact"},{"name":"up regulation of potassium ion transmembrane transport","type":"exact"},{"name":"up-regulation of potassium ion transmembrane transport","type":"exact"},{"name":"upregulation of potassium ion transmembrane transport","type":"exact"}],"termid":"GO:1901381"}


id: GO:0001850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3a product of the complement cascade.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement binding","termid":"GO:0001848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"complement component C3a binding","termid":"GO:0001850"}


id: GO:0042414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving epinephrine, a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine.","definition_xrefs":["ISBN:0192801023","GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epinephrine metabolic process","synonyms":[{"name":"adrenaline metabolic process","type":"exact"},{"name":"adrenaline metabolism","type":"exact"},{"name":"epinephrine metabolism","type":"exact"}],"termid":"GO:0042414"}


id: GO:1990400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a mitochondrial large ribosomal subunit RNA (LSU rRNA).","definition_xrefs":["PMID:24206665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large ribosomal subunit rRNA binding","termid":"GO:0070180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"mitochondrial ribosomal large subunit rRNA binding","synonyms":[{"name":"21S rRNA binding","type":"narrow"},{"name":"mitochondrial LSU rRNA binding","type":"exact"}],"termid":"GO:1990400"}


id: GO:2000929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of cellodextrin metabolic process","termid":"GO:2000926"},{"relation_name":"is_a","term_name":"regulation of cellodextrin catabolic process","termid":"GO:2000927"},{"relation_name":"positively_regulates","term_name":"cellodextrin catabolic process","termid":"GO:2000890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cellodextrin catabolic process","synonyms":[{"name":"positive regulation of cellodextrin catabolism","type":"exact"}],"termid":"GO:2000929"}


id: MONDO:1011316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorder of visual system that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disorder of visual system, non-human animal","termid":"MONDO:1011316","xrefs":{"Monarch":{"xref_id":"1011316"}}}


id: PBO:0029659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_deadenylation-independent_decapping_of_nuclear-transcribed_mRNA","termid":"PBO:0029659"}


id: MONDO:0008148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteogenesis imperfecta type IV is a moderate type of osteogenesis imperfecta (OI), a genetic disorder characterized by increased bone fragility, low bone mass and susceptibility to bone fractures. Patients with type IV have moderately short stature, mild to moderate scoliosis, grayish or white sclera, and dentinogenesis imperfecta (DI).","definition_xrefs":["Orphanet:216820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 4","secondary_identifiers":["MESH:C536045","SCTID:205497004","GARD:8696","OMIM:166220","NCIT:C98576","icd11.foundation:829297901","UMLS:C0268363","DOID:0110340","MEDGEN:78665"],"synonyms":[{"name":"OI type 4","type":"exact"},{"name":"OI type IV","type":"related"},{"name":"OI, type 4","type":"related"},{"name":"OI4","type":"exact"},{"name":"common variable OI with normal sclerae","type":"related"},{"name":"osteogenesis imperfecta type IV","type":"exact"},{"name":"osteogenesis imperfecta with normal sclera","type":"exact"},{"name":"osteogenesis imperfecta with normal sclerae","type":"related"},{"name":"osteogenesis imperfecta, type 4","type":"related"},{"name":"osteogenesis imperfecta, type IV","type":"related"}],"termid":"MONDO:0008148","xrefs":{"Monarch":{"xref_id":"0008148"}}}


id: PBO:0079630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Q2","termid":"PBO:0079630"}


id: PBO:0039652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP1M2 pseudogene 1","termid":"PBO:0039652"}


id: MOD:00369
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-acetyl-L-serine.","definition_xrefs":["PubMed:15350136","PubMed:12175151","PubMed:16731519","PubMed:489587","ChEBI:17981","PubMed:7309355","RESID:AA0364","PubMed:14730666","Unimod:1#S","PubMed:11999733","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetylated residue","termid":"MOD:00644"},{"relation_name":"is_a","term_name":"acetylated L-serine","termid":"MOD:00647"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetyl-L-serine","synonyms":[{"name":"(2S)-3-(acetyloxy)-2-aminopropanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"Acetylation","type":"related"},{"name":"MOD_RES O-acetylserine","type":"exact"},{"name":"O-acetyl-L-serine","type":"exact"},{"name":"O-acetylated L-serine","type":"exact"},{"name":"O-acetylserine","type":"exact"},{"name":"OAcSer","type":"exact"},{"name":"serine acetate ester","type":"exact"}],"termid":"MOD:00369"}


id: GO:1903527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane tubulation.","definition_xrefs":["GOC:pm","GO_REF:0000058","PMID:18388313","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of membrane tubulation","termid":"GO:1903525"},{"relation_name":"positively_regulates","term_name":"plasma membrane tubulation","termid":"GO:0097320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of membrane tubulation","synonyms":[{"name":"activation of membrane tubulation","type":"narrow"},{"name":"activation of plasma membrane tubulation","type":"narrow"},{"name":"positive regulation of plasma membrane tubulation","type":"exact"},{"name":"up regulation of membrane tubulation","type":"exact"},{"name":"up regulation of plasma membrane tubulation","type":"exact"},{"name":"up-regulation of membrane tubulation","type":"exact"},{"name":"up-regulation of plasma membrane tubulation","type":"exact"},{"name":"upregulation of membrane tubulation","type":"exact"},{"name":"upregulation of plasma membrane tubulation","type":"exact"}],"termid":"GO:1903527"}


id: PBO:0088851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal cell surface protein, Kre9/Knh1 family","termid":"PBO:0088851"}


id: GO:0141054
data:
  {"annotated_genes":["SJAG_03006","SJAG_02319"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119248,116600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin to a histone H2B substrate.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone ubiquitin ligase activity","termid":"GO:0140852"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02319":null,"SJAG_03006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0019787","GO:0016740","GO:0140096","GO:0004842","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"histone H2B ubiquitin ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141054","terms_by_termid":{"GO:0140850":null}}


id: MONDO:0001133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Essential hypertension with rapid progression to severe high blood pressure, papilledema, and renal failure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"essential hypertension","termid":"MONDO:0001134"},{"relation_name":"is_a","term_name":"malignant hypertension","termid":"MONDO:0006846"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant essential hypertension","secondary_identifiers":["UMLS:C0024588","NCIT:C34802","SCTID:78975002","ICD9:401.0","DOID:10823","MEDGEN:9866"],"synonyms":[{"name":"accelerated essential hypertension","type":"exact"},{"name":"malignant essential hypertension","type":"exact"}],"termid":"MONDO:0001133","xrefs":{"Monarch":{"xref_id":"0001133"}}}


id: MONDO:0011668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monogenic diabetes caused by inactivating mutation(s) in the gene NEUROD1, encoding neurogenic differentiation 1. In addition to diabetes, this condition may be associated with neurogenic anomalies. Homozygous NEUROD1 mutations result in permanent neonatal diabetes.","definition_xrefs":["NCIT:C129745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005015","MONDO:0005066","MONDO:0004335","MONDO:0019254","MONDO:0037792"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 6","secondary_identifiers":["GARD:10660","MEDGEN:344030","OMIM:606394","SCTID:609573005","DOID:0111104","UMLS:C1853371","MESH:C565231"],"synonyms":[{"name":"MODY NEUROD1 related","type":"related"},{"name":"MODY type 6","type":"exact"},{"name":"MODY, type 6","type":"related"},{"name":"MODY6","type":"exact"},{"name":"NEUROD1 maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"NEUROD1-associated monogenic diabetes","type":"exact"},{"name":"diabetes mellitus MODY type 6","type":"related"},{"name":"maturity onset diabetes of the Young, type 6","type":"exact"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in NEUROD1","type":"exact"},{"name":"maturity-onset diabetes of the young 6","type":"exact"},{"name":"maturity-onset diabetes of the young, type 6","type":"related"},{"name":"neurogenic differentiation Factor 1-associated monogenic diabetes","type":"exact"},{"name":"type 6 maturity-onset diabetes of the young","type":"related"}],"termid":"MONDO:0011668","xrefs":{"Monarch":{"xref_id":"0011668"}}}


id: PBO:0113436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spt4p/5p (DSIF) transcription elongation factor complex subunit; Spt4/5 binds ssRNA in a sequence-specific manner and along with RNAP I and II regulates transcriptional elongation, RNA processing, quality control, and transcription-coupled repair; localizes to kinetochores and heterochromatin, influencing chromosomal dynamics and silencing; required for transcription through long trinucleotide repeats in ORFs and non-protein coding regions; accelerates senescence through rDNA instability","termid":"PBO:0113436"}


id: GO:0002083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: all-trans-decaprenyl diphosphate + 4-hydroxybenzoate = 3-decaprenyl-4-hydroxybenzoate + diphosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-hydroxybenzoate decaprenyltransferase activity (obsolete GO:0002083)","secondary_identifiers":["Reactome:R-HSA-2162192"],"termid":"GO:0002083"}


id: MONDO:0024556
data:
  {"annotated_genes":["SJAG_00824"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85704],"is_not":false,"summary":null,"term":"MONDO:0024556"}]},"cv_name":"mondo","definition":"Any epilepsy, familial focal, with variable foci in which the cause of the disease is a mutation in the DEPDC5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial focal epilepsy with variable foci","termid":"MONDO:0020310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial focal, with variable foci 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18202","NCIT:C161005","UMLS:C4551983","MEDGEN:1641798","OMIM:604364","DOID:0081421"],"synonyms":[{"name":"DEPDC5 epilepsy, familial focal, with variable foci","type":"exact"},{"name":"FFEVF1","type":"related"},{"name":"epilepsy, familial focal, with variable foci","type":"related"},{"name":"epilepsy, familial focal, with variable foci 1","type":"exact"},{"name":"epilepsy, familial focal, with variable foci caused by mutation in DEPDC5","type":"exact"},{"name":"epilepsy, partial, with variable foci","type":"related"}],"termid":"MONDO:0024556","terms_by_termid":{"MONDO:0024556":null},"xrefs":{"Monarch":{"xref_id":"0024556"}}}


id: GO:0061311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand the binding to its receptor on the surface of a cell, which contributes to the progression of the heart over time.","definition_xrefs":["GOC:signaling","GOC:mtg_heart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell surface receptor signaling pathway involved in heart development","synonyms":[{"name":"cell surface receptor linked signaling pathway involved in heart development","type":"exact"},{"name":"cell surface receptor linked signalling pathway involved in heart development","type":"exact"}],"termid":"GO:0061311"}


id: PBO:0029116
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_phase","termid":"PBO:0029116"}


id: PBO:0050321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 23","termid":"PBO:0050321"}


id: GO:0110155
data:
  {"annotated_genes":["SJAG_02374"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73468],"is_not":false,"summary":null,"term":"GO:0110155"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-NAD-cap of an RNA. The NAD-cap is present at the 5'-end of some RNAs in both bacetria and eukaryotes. While it promotes RNA stability in bacteria, it promotes RNA decay in eukaryotes.","definition_xrefs":["PMID:31101919","PMID:28283058","PMID:25533955","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA decapping","termid":"GO:0110154"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02374":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"NAD-cap decapping","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0110155","terms_by_termid":{"GO:0110155":null}}


id: PR:O94751
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bub1 gene.","definition_xrefs":["PRO:CNA","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint serine/threonine-protein kinase BUB1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.12c","secondary_identifiers":["UniProtKB:O94751","PR:000035570"],"synonyms":[{"name":"BUB1 (pombe)","type":"exact"},{"name":"SPCC1322.12c","type":"related"},{"name":"Spom972h-bub1","type":"exact"}],"termid":"PR:O94751"}


id: PBO:0050101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 11","termid":"PBO:0050101"}


id: PBO:0017890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II binding AAA family ATPase Npa3 (predicted)","termid":"PBO:0017890"}


id: GO:2001091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a nigerotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nigerotriose transport","termid":"GO:2001091"}


id: PBO:0079556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 9","termid":"PBO:0079556"}


id: PBO:0110464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR2 pseudogene 2","termid":"PBO:0110464"}


id: PBO:0082851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper-sensing transcription factor; involved in regulation of genes required for high affinity copper transport; required for regulation of yeast copper genes in response to DNA-damaging agents; undergoes changes in redox state in response to changing levels of copper or MMS","termid":"PBO:0082851"}


id: GO:0002092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of receptor internalization.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor internalization","termid":"GO:0002090"},{"relation_name":"is_a","term_name":"positive regulation of receptor-mediated endocytosis","termid":"GO:0048260"},{"relation_name":"positively_regulates","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor internalization","synonyms":[{"name":"activation of receptor internalization","type":"narrow"},{"name":"stimulation of receptor internalization","type":"narrow"},{"name":"up regulation of receptor internalization","type":"exact"},{"name":"up-regulation of receptor internalization","type":"exact"},{"name":"upregulation of receptor internalization","type":"exact"}],"termid":"GO:0002092"}


id: PBO:0029227
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_EPC","termid":"PBO:0029227"}


id: PBO:0036126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_nucleation","termid":"PBO:0036126"}


id: PBO:0016065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related endocytic adaptor Any2 (predicted)","termid":"PBO:0016065"}


id: FYPO:0002312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to ionizing radiation during vegetative growth","synonyms":[{"name":"increased vegetative cell population growth during cellular response to ionizing radiation","type":"exact"},{"name":"resistance to gamma irradiation during vegetative growth","type":"narrow"},{"name":"resistance to gamma radiation during vegetative growth","type":"narrow"},{"name":"resistance to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"resistant to IR during vegetative growth","type":"exact"},{"name":"resistant to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0002312"}


id: PBO:0083780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nucleolar protein required for pre-18S rRNA processing; interacts with Dim1p, an 18S rRNA dimethyltransferase, and also with Nob1p, which is involved in proteasome biogenesis; contains a KH domain","termid":"PBO:0083780"}


id: PBO:0050109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 19","termid":"PBO:0050109"}


id: PBO:0058674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6802","termid":"PBO:0058674"}


id: MOD:02001
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a stearoyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"stearoylated residue","termid":"MOD:02001"}


id: PBO:0028697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_degradation_of_middle_meiotic_gene_mRNA_during_late_meiosis","termid":"PBO:0028697"}


id: MONDO:1011266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cone-rod dystrophy that occurs in dogs due to a mutation in the PDE6B gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy, non-human animal","termid":"MONDO:1012582"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod dystrophy, PDE6B-related dog","secondary_identifiers":["OMIA:001674-9615"],"synonyms":[{"name":"retinal atrophy - cone-rod dystrophy 1, dog","type":"related"}],"termid":"MONDO:1011266","xrefs":{"Monarch":{"xref_id":"1011266"}}}


id: GO:0009807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lignans, any member of a class of plant metabolites related to lignins. Lignans are usually found as phenylpropanoid dimers in which the phenylpropanoid units are linked tail to tail and thus having a 2,3 dibenzylbutane skeleton, but higher oligomers can also exist.","definition_xrefs":["PMID:10074466","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"lignan biosynthetic process","synonyms":[{"name":"lignan anabolism","type":"exact"},{"name":"lignan biosynthesis","type":"exact"},{"name":"lignan formation","type":"exact"},{"name":"lignan synthesis","type":"exact"}],"termid":"GO:0009807"}


id: PBO:0063650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 7","termid":"PBO:0063650"}


id: GO:0050243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + NADP+ + pyruvate = acetyl-CoA + CO2 + NADPH.","definition_xrefs":["RHEA:17425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"pyruvate dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:PYRUVATE-DEHYDROGENASE-NADP+-RXN","KEGG_REACTION:R00210","EC:1.2.1.51"],"synonyms":[{"name":"pyruvate:NADP(+) oxidoreductase activity","type":"related"},{"name":"pyruvate:NADP+ 2-oxidoreductase (CoA-acetylating)","type":"related"},{"name":"pyruvate:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050243"}


id: FYPO:0000513
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which karyogamy involved in conjugation with cellular fusion begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear fusion during mating","termid":"FYPO:0000510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000301"],"is_obsolete":false,"name":"delayed onset of nuclear fusion during mating","synonyms":[{"name":"delayed nuclear fusion during mating","type":"exact"},{"name":"delayed onset of karyogamy","type":"exact"},{"name":"delayed onset of karyogamy involved in conjugation with cellular fusion","type":"exact"},{"name":"nuclear fusion during mating: delayed","type":"related"}],"termid":"FYPO:0000513"}


id: PBO:0083396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF RGI1/YER067W","termid":"PBO:0083396"}


id: MONDO:0018393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Male infertility with azoospermia or oligospermia due to single gene mutation is a rare, genetic male infertility due to sperm disorder characterized by the absence of a measurable amount of spermatozoa in the ejaculate (azoospermia), or a number of sperm in the ejaculate inferior to 15 million/mL (oligozoospermia), resulting from a mutation in a single gene known to cause azoo- or oligo-spermia. Sperm morphology may be normal.","definition_xrefs":["Orphanet:399805"],"gene_count":0,"genotype_count":0,"name":"obsolete male infertility with azoospermia or oligozoospermia due to single gene mutation (obsolete MONDO:0018393)","termid":"MONDO:0018393","xrefs":{"Monarch":{"xref_id":"0018393"}}}


id: PBO:0029727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_separation_after_cytokinesis_resulting_in_chained_cells","termid":"PBO:0029727"}


id: SO:0002306
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a chromosome where regulatory events occur, including epigenetic modifications. These epigenetic modifications can include nucleosome modifications and post-replicational DNA modifications.","definition_xrefs":["GREEKC:cl","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin_regulatory_region","synonyms":[{"name":"chromatin regulatory region","type":"exact"}],"termid":"SO:0002306"}


id: FYPO:0000906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion inheritance is abnormal. Mitochondrion inheritance is a cellular process that results in the distribution of mitochondria into daughter cells after mitosis or meiosis, mediated by interactions between mitochondria and the cytoskeleton.","definition_xrefs":["GO:0000001","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial distribution","termid":"FYPO:0000489"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"},{"relation_name":"is_a","term_name":"abnormal mitochondrion inheritance","termid":"FYPO:0007274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitochondrion inheritance during vegetative growth","synonyms":[{"name":"abnormal mitochondrial inheritance during vegetative growth","type":"exact"},{"name":"abnormal mitochondrion inheritance during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000906"}


id: MONDO:0015597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"psoriasis","termid":"MONDO:0005083"},{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"pustulosis palmaris et plantaris","secondary_identifiers":["DOID:4398","MedDRA:10050185","SCTID:27520001","UMLS:C0030246","ICD10CM:L40.3","ICD9:696.1","MESH:D011565","NORD:2008","Orphanet:163927","MEDGEN:45290","SCTID:81271001","icd11.foundation:877172115","NCIT:C34888","GARD:12820"],"synonyms":[{"name":"LPP","type":"exact"},{"name":"PPP","type":"exact"},{"name":"Palmoplantar Pustulosis","type":"exact"},{"name":"acropustulosis","type":"exact"},{"name":"localised pustular psoriasis","type":"exact"},{"name":"localized pustular psoriasis","type":"exact"},{"name":"palmoplantar pustulosis","type":"exact"},{"name":"pustular psoriasis of the palms and/or soles","type":"exact"},{"name":"pustulosis of palm and sole","type":"exact"}],"termid":"MONDO:0015597","xrefs":{"Monarch":{"xref_id":"0015597"}}}


id: MONDO:0003246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon type of hepatocelluar carcinoma, morphologically characterized by significant fibrosis around the sinusoid-like spaces and atrophy of the tumor trabeculae.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatocellular carcinoma","termid":"MONDO:0007256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"sclerosing hepatic carcinoma","secondary_identifiers":["UMLS:C1266018","ICDO:8172/3","MEDGEN:266088","DOID:5026","NCIT:C27388"],"synonyms":[{"name":"scirrhous hepatocellular cancer","type":"exact"},{"name":"scirrhous hepatocellular carcinoma","type":"exact"},{"name":"sclerosing hepatic carcinoma","type":"exact"},{"name":"sclerosing hepatocellular carcinoma","type":"exact"}],"termid":"MONDO:0003246","xrefs":{"Monarch":{"xref_id":"0003246"}}}


id: PBO:0078339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 5-1","termid":"PBO:0078339"}


id: PBO:0000181
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystonia-deafness syndrome","termid":"PBO:0000181"}


id: GO:1901220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac chamber morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of cardiac chamber morphogenesis","termid":"GO:1901219"},{"relation_name":"negatively_regulates","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac chamber morphogenesis","synonyms":[{"name":"down regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"down regulation of heart chamber morphogenesis","type":"exact"},{"name":"down-regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"down-regulation of heart chamber morphogenesis","type":"exact"},{"name":"downregulation of cardiac chamber morphogenesis","type":"exact"},{"name":"downregulation of heart chamber morphogenesis","type":"exact"},{"name":"inhibition of cardiac chamber morphogenesis","type":"narrow"},{"name":"inhibition of heart chamber morphogenesis","type":"narrow"},{"name":"negative regulation of heart chamber morphogenesis","type":"exact"}],"termid":"GO:1901220"}


id: PBO:0069261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 517, pseudogene","termid":"PBO:0069261"}


id: GO:0010680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cinnamic acid, 3-phenyl-2-propenoic acid, which is then utilized in the metabolism of coumarin.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cinnamic acid biosynthetic process involved in coumarin metabolism (obsolete GO:0010680)","termid":"GO:0010680"}


id: PBO:0003381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical anchoring factor for dynein Mcp5/Num1","termid":"PBO:0003381"}


id: MONDO:0021451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the brain.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of brain","secondary_identifiers":["ICD9:225.0","MEDGEN:99225","NCIT:C4781","UMLS:C0496899","SCTID:92030004","EFO:1000107"],"synonyms":[{"name":"benign brain neoplasm","type":"exact"},{"name":"benign brain tumor","type":"exact"},{"name":"benign brain tumour","type":"exact"},{"name":"benign neoplasm of the brain","type":"exact"},{"name":"benign tumor of brain","type":"exact"},{"name":"benign tumor of the brain","type":"exact"},{"name":"benign tumour of brain","type":"exact"},{"name":"benign tumour of the brain","type":"exact"},{"name":"brain benign neoplasm","type":"exact"},{"name":"brain neoplasms, benign","type":"exact"}],"termid":"MONDO:0021451","xrefs":{"Monarch":{"xref_id":"0021451"}}}


id: GO:0086060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a sodium ion by a voltage-gated channel through the plasma membrane of an AV node cardiac muscle cell contributing to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated sodium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated sodium channel activity involved in AV node cell action potential","synonyms":[{"name":"voltage-gated sodium channel activity involved in AV node cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated sodium channel activity involved in atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086060"}


id: MONDO:0002493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive adenocarcinoma of the prostate gland composed of secretory cells. It is the most common histologic type of prostate adenocarcinoma. Several morphologic variants exist, including atrophic, pseudohyperplastic, foamy gland, and oncocytic variants.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acinar cell carcinoma","termid":"MONDO:0004965"},{"relation_name":"is_a","term_name":"prostate adenocarcinoma","termid":"MONDO:0005082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostatic acinar adenocarcinoma","secondary_identifiers":["DOID:3024","NCIT:C5596","MEDGEN:231350","UMLS:C1332139"],"synonyms":[{"name":"acinar adenocarcinoma of prostate","type":"exact"},{"name":"acinar adenocarcinoma of the prostate","type":"exact"},{"name":"acinar prostate adenocarcinoma","type":"exact"},{"name":"prostate acinar adenocarcinoma","type":"exact"},{"name":"prostatic acinar adenocarcinoma","type":"exact"}],"termid":"MONDO:0002493","xrefs":{"Monarch":{"xref_id":"0002493"}}}


id: PBO:0083008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Daughter cell-specific secreted protein with similarity to glucanases; degrades cell wall from the daughter side causing daughter to separate from mother; localizes in birth scars; expression is repressed by cAMP","termid":"PBO:0083008"}


id: GO:0006666
data:
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id: PR:O59681
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18E5.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18E5.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.01","synonyms":[{"name":"Spom972h-SPBC18E5.01","type":"exact"}],"termid":"PR:O59681"}


id: GO:0050967
data:
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id: FYECO:0000137
data:
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type"}]}]},"win1delta":{"display_name":"win1delta","display_uniquename":"win1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04777:allele-1","expression":"Null"}]}]},"wis1delta":{"display_name":"wis1delta","display_uniquename":"wis1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02342:allele-1","expression":"Null"}]}]},"wis4delta":{"display_name":"wis4delta","display_uniquename":"wis4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03384:allele-1","expression":"Null"}]}]}},"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04280","SJAG_01680","SJAG_05207","SJAG_03198","SJAG_03892","SJAG_01143","SJAG_02392","SJAG_01946","SJAG_03575","SJAG_04522","SJAG_00118","SJAG_03596","SJAG_00028","SJAG_01205","SJAG_02266"],"name":"YES","references_by_uniquename":{"PMID:20368354":null,"PMID:22300943":null,"PMID:23090706":null,"PMID:23786411":null,"PMID:25866389":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32915139":null,"PMID:36058798":null,"PMID:36695178":null,"PMID:37164017":null,"PMID:37233261":null,"PMID:40195311":null},"secondary_identifiers":["FYECO:0000012"],"single_locus_annotated_genes":["SJAG_00601","SJAG_01680","SJAG_03720","SJAG_01205","SJAG_02576","SJAG_03892","SJAG_03453","SJAG_04843","SJAG_02266","SJAG_04777","SJAG_03048","SJAG_01181","SJAG_02013","SJAG_02923","SJAG_03384","SJAG_00266","SJAG_02379","SJAG_01753","SJAG_00993","SJAG_04280","SJAG_03143","SJAG_02392","SJAG_03581","SJAG_01605","SJAG_02592","SJAG_04697","SJAG_01956","SJAG_01355","SJAG_04284","SJAG_03575","SJAG_03753","SJAG_03198","SJAG_03351","SJAG_01946","SJAG_01050","SJAG_00409","SJAG_00028","SJAG_01718","SJAG_04312","SJAG_02527","SJAG_04332","SJAG_02252","SJAG_02819","SJAG_04287","SJAG_04009","SJAG_03360","SJAG_03596","SJAG_02486","SJAG_02342","SJAG_00370","SJAG_00429","SJAG_01745","SJAG_02771","SJAG_00364","SJAG_00118","SJAG_04522","SJAG_04883","SJAG_04671","SJAG_01794","SJAG_01410","SJAG_03920","SJAG_00514","SJAG_01143","SJAG_05207","SJAG_04551"],"single_locus_genotype_uniquenames":["rga4delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","spk1delta","gpd1delta","rad1delta","nup61delta","rad26delta","efc25delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","ace2delta","mid1delta","rad9delta","mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","gap1delta","ras1delta","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","rad25delta","ste11delta","rip1delta","crb2delta","cem1delta","byr1delta","scd2delta","chk1delta","gef1delta","erg1delta","pek1delta","pyp1delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","tel1delta","rad51delta","mkh1delta","mid2delta","pka1delta","mrc1delta","byr2delta","rad24delta","cds1delta","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","win1delta","ptp4delta","cox6delta","cmp7delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","nur1delta","mdh1delta","pom1delta","oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","sep1delta","oar2delta","gms1delta","pmk1delta","scd1delta","atf1delta","sty1delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","shc1delta","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","lem2delta","fum1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","rga6delta","wis4delta","chk1-P470L-P470L-amino_acid_mutation-expression-not_assayed_or_wild_type","sdh3delta","rad3delta","ste6delta","wis1delta"],"synonyms":[{"name":"YE","type":"narrow"},{"name":"YE4S","type":"narrow"},{"name":"YE5S","type":"narrow"},{"name":"complex medium","type":"related"},{"name":"glucose rich medium","type":"exact"},{"name":"normal glucose rich medium","type":"exact"},{"name":"standard dextrose rich medium","type":"exact"},{"name":"standard glucose rich medium","type":"exact"}],"termid":"FYECO:0000137","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000103":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYECO:0000338":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0015366
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101998],"is_not":false,"summary":null,"term":"GO:0015366"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: malate(out) + H+(out) = malate(in) + H+(in).","definition_xrefs":["TC:2.A.16.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malate transmembrane transporter activity","termid":"GO:0015140"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"malate:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-malic acid permease","type":"related"},{"name":"L-malic acid:proton symporter activity","type":"related"},{"name":"malate permease","type":"related"},{"name":"malate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015366","terms_by_termid":{"GO:0015366":null}}


id: GO:0010949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of phytosterols into the blood by absorption from the small intestine.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intestinal lipid absorption","termid":"GO:1904730"},{"relation_name":"negatively_regulates","term_name":"intestinal phytosterol absorption","termid":"GO:0060752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of intestinal phytosterol absorption","termid":"GO:0010949"}


id: GO:0061389
data:
  {"annotated_genes":["SJAG_00216","SJAG_04724","SJAG_04322","SJAG_01456","SJAG_03705","SJAG_03486","SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118297,103830,111135,100076,116869,88375,107218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051523"}]},"cv_name":"biological_process","definition":"Any process that modulates the direction of cell growth.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00216":null,"SJAG_01456":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of direction of cell growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061389","terms_by_termid":{"GO:0051523":null}}


id: SOFP:cyto_range
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"The cytological range covered by a feature. May be auto-generated from sequence coordinates, or determined by experimental methods","definition_xrefs":["so:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyto_range","termid":"SOFP:cyto_range"}


id: PBO:0048510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 11","termid":"PBO:0048510"}


id: PBO:0110163
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in eukarytoes only","termid":"PBO:0110163"}


id: PBO:0091073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidylyltransferase","termid":"PBO:0091073"}


id: PR:Q9UU99
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC23B6.04c gene.","definition_xrefs":["UniProtKB:Q9UU99","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C23B6.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC23B6.04c","synonyms":[{"name":"Spom972h-SPCC23B6.04c","type":"exact"}],"termid":"PR:Q9UU99"}


id: PBO:0060953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor kappa B subunit 1","termid":"PBO:0060953"}


id: SO:0001335
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Undermodified_hydroxywybutosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"undermodified_hydroxywybutosine","secondary_identifiers":["RNAMOD:040"],"synonyms":[{"name":"OHyW*","type":"exact"},{"name":"undermodified hydroxywybutosine","type":"exact"}],"termid":"SO:0001335"}


id: MOD:00800
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue, an L-histidine residue, homocitric acid and a one-vanadium seven-iron nine-sulfur cluster to L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide.","definition_xrefs":["PubMed:2345152","RESID:AA0393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"vanadium containing modified residue","termid":"MOD:00772"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide","synonyms":[{"name":"CysHis-[V7Fe9S]","type":"exact"},{"name":"L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide carbide","type":"exact"},{"name":"nitrogenase iron-vanadium cofactor","type":"exact"}],"termid":"MOD:00800"}


id: GO:0051197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a coenzyme.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of coenzyme metabolic process (obsolete GO:0051197)","synonyms":[{"name":"activation of coenzyme metabolic process","type":"narrow"},{"name":"positive regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"positive regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"positive regulation of coenzyme metabolism","type":"exact"},{"name":"stimulation of coenzyme metabolic process","type":"narrow"},{"name":"up regulation of coenzyme metabolic process","type":"exact"},{"name":"up-regulation of coenzyme metabolic process","type":"exact"},{"name":"upregulation of coenzyme metabolic process","type":"exact"}],"termid":"GO:0051197"}


id: GO:1900492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of [4Fe-4S] cluster assembly.","definition_xrefs":["GOC:mengo_curators","GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of [4Fe-4S] cluster assembly","termid":"GO:1900491"},{"relation_name":"is_a","term_name":"negative regulation of iron-sulfur cluster assembly","termid":"GO:1903330"},{"relation_name":"negatively_regulates","term_name":"[4Fe-4S] cluster assembly","termid":"GO:0044572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0016226"],"is_obsolete":false,"name":"negative regulation of [4Fe-4S] cluster assembly","synonyms":[{"name":"down regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"down regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"down regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"down-regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"down-regulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"down-regulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"downregulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"downregulation of [4Fe-4S] cluster assembly","type":"exact"},{"name":"downregulation of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"inhibition of 4Fe-4S cluster assembly","type":"narrow"},{"name":"inhibition of [4Fe-4S] cluster assembly","type":"narrow"},{"name":"inhibition of [4Fe-4S] cluster biosynthetic process","type":"related"},{"name":"negative regulation of 4Fe-4S cluster assembly","type":"exact"},{"name":"negative regulation of [4Fe-4S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900492"}


id: FYPO:0003662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via an error-free mechanism, such as homologous recombination or break-induced replication, is increased.","definition_xrefs":["PMID:10373582","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"increased error-free double-strand break repair","synonyms":[{"name":"increased error-free double-strand break repair during mitotic cell cycle","type":"related"},{"name":"increased error-free double-strand break repair during vegetative growth","type":"exact"}],"termid":"FYPO:0003662"}


id: PBO:0028796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_rDNA_replication_fork_barrier","termid":"PBO:0028796"}


