# terms

id: GO:0021882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GO_REF:0000021","GOC:jid","PMID:16226447","GOC:cls","GOC:dph","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment (obsolete GO:0021882)","termid":"GO:0021882"}


id: PBO:0080942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zygote arrest 1","termid":"PBO:0080942"}


id: PBO:0005026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in ribosome biogenesis (predicted)","termid":"PBO:0005026"}


id: PBO:0044608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 12 like 2","termid":"PBO:0044608"}


id: PBO:0060758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 2","termid":"PBO:0060758"}


id: GO:0106259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directional movement of a symbiont from one host cell to another.","definition_xrefs":["PMID:19816653","PMID:29567712","PMID:18456802","PMID:19262673","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"migration in host","termid":"GO:0044001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated cell-to-cell migration in host","synonyms":[{"name":"cell-to-cell migration in host","type":"exact"},{"name":"symbiont-mediated dissemination across host cells","type":"exact"}],"termid":"GO:0106259"}


id: PBO:0002524
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.3","termid":"PBO:0002524"}


id: PR:Q09739
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic nuclear division protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13A11.03","secondary_identifiers":["UniProtKB:Q09739"],"synonyms":[{"name":"Spom972h-MND1","type":"exact"},{"name":"meiotically up-regulated gene 32 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09739"}


id: MONDO:0100024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the onset of seizures between 3 and 20 months of age (peak 6 months). Seizures may be frequent at onset but usually remit within 1 year from the onset. In untreated cases there can be isolated or brief clusters of seizures within the period from onset to remission. A minority of individuals may have epilepsy in later life. Some patients (with PRRT2 mutations) may develop paroxysmal kinesiogenic dyskinesia in later life.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neonatal/infantile epilepsy syndrome","termid":"MONDO:0100022"},{"relation_name":"is_a","term_name":"infantile-onset epilepsy","termid":"MONDO:0100207"},{"relation_name":"is_a","term_name":"neonatal/infantile-onset self-limited epilepsy syndrome","termid":"MONDO:0800488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"self-limited familial infantile epilepsy","synonyms":[{"name":"SeLFIE","type":"exact"},{"name":"self-limited familial and non-familial infantile seizures","type":"exact"}],"termid":"MONDO:0100024","xrefs":{"Monarch":{"xref_id":"0100024"}}}


id: MONDO:0023599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of skeletal dysplasia characterized by shortening of the bones of the middle segments of the limbs (i.e., the radii, ulnae, tibiae and fibulae).","definition_xrefs":["NCIT:C121156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"mesomelic dysplasia","secondary_identifiers":["MEDGEN:593147","SCTID:205473008","UMLS:C0410536"],"synonyms":[{"name":"Mesomelic Dysplasia","type":"related"},{"name":"Mesomelic dwarf","type":"related"},{"name":"Mesomelic dysplasia","type":"related"},{"name":"mesomelic dysplasia","type":"exact"},{"name":"mesomelic dysplasias","type":"exact"}],"termid":"MONDO:0023599","xrefs":{"Monarch":{"xref_id":"0023599"}}}


id: PBO:0070371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 9","termid":"PBO:0070371"}


id: PBO:0050244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 22","termid":"PBO:0050244"}


id: MONDO:1012167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lower motor neuron disease, non-human animal","termid":"MONDO:1011848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower motor neuron disease, dog","secondary_identifiers":["OMIA:000662-9615"],"termid":"MONDO:1012167","xrefs":{"Monarch":{"xref_id":"1012167"}}}


id: PBO:0058642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6771","termid":"PBO:0058642"}


id: GO:0140091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A muscle cell-specific SWI/SNF-type complex that contains eight to fourteen proteins, including both conserved (core) and nonconserved components; contains the ATPase product of either the SMARCA4/BAF190A/BRG1 gene, the mammalian ortholog of the yeast SNF2 gene, or the SMARCA2/BAF190B/BRM gene, the mammalian ortholog of the Drosophila brm (brahma) gene, or an ortholog of either of these genes, and the muscle-specific product of the DPF3/BAF45C gene or an ortholog thereof.","definition_xrefs":["PMID:8895581","GO:bhm","PMID:12620226","PMID:15525990","PMID:11175787","PMID:8804307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005694","GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"mBAF complex","synonyms":[{"name":"muscle-specific BAF complex","type":"exact"},{"name":"muscle-specific SWI/SNF complex","type":"exact"},{"name":"muscle-type BAF complex","type":"exact"},{"name":"muscle-type SWI/SNF complex","type":"exact"}],"termid":"GO:0140091"}


id: PBO:0061322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family, member A9","termid":"PBO:0061322"}


id: FYECO:0000095
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Recovery from nitrogen starvation: cells are first grown in minimal medium containing no nitrogen for 24-48h. This medium is then replaced with rich medium containing nitrogen and cells allowed to grow for 4-7 days.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen starvation and recovery","termid":"FYECO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"24-48h nitrogen starvation followed by 4-7 day recovery in rich medium","termid":"FYECO:0000095"}


id: PBO:0073362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family F member 2","termid":"PBO:0073362"}


id: PBO:0089533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-3 phosphoglycerate dehydrogenase Ser3","termid":"PBO:0089533"}


id: GO:0102456
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-sinapoyl-beta-D-glucose = cyanin betaine + trans-sinapate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-glucoside 5-O-glucosyltransferase (sinapoyl-glucose dependent) activity (obsolete GO:0102456)","termid":"GO:0102456"}


id: MONDO:0035001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder of the visual organs (obsolete MONDO:0035001)","secondary_identifiers":["Orphanet:520814"],"termid":"MONDO:0035001","xrefs":{"Monarch":{"xref_id":"0035001"}}}


id: PR:Q10202
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.06","synonyms":[{"name":"Spom972h-dbp3","type":"exact"}],"termid":"PR:Q10202"}


id: MONDO:0022656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiomyopathy spherocytosis","termid":"MONDO:0022656","xrefs":{"Monarch":{"xref_id":"0022656"}}}


id: GO:0061919
data:
  {"annotated_genes":["SJAG_05017","SJAG_01783","SJAG_02433","SJAG_01561","SJAG_03467","SJAG_00763","SJAG_04860","SJAG_00724","SJAG_02525","SJAG_03799","SJAG_01467","SJAG_00079","SJAG_00284","SJAG_03345","SJAG_05210","SJAG_01876","SJAG_05289","SJAG_01251","SJAG_02315","SJAG_05000","SJAG_01073","SJAG_05184","SJAG_01382","SJAG_03435","SJAG_00974","SJAG_02852","SJAG_00824","SJAG_01274","SJAG_00115","SJAG_03136","SJAG_00114","SJAG_00850","SJAG_04496","SJAG_04219","SJAG_02539","SJAG_04552","SJAG_00004","SJAG_05245","SJAG_00029","SJAG_00820","SJAG_00457","SJAG_03100","SJAG_01135","SJAG_01415","SJAG_03371","SJAG_02432","SJAG_02723","SJAG_00732","SJAG_01509","SJAG_05346","SJAG_01367","SJAG_04963","SJAG_00355","SJAG_02100","SJAG_01184","SJAG_04294","SJAG_04502","SJAG_00380","SJAG_04021","SJAG_04655","SJAG_05261","SJAG_01716","SJAG_06309","SJAG_04435","SJAG_03718","SJAG_01311","SJAG_04249","SJAG_01283","SJAG_01722","SJAG_02765","SJAG_02441","SJAG_00059","SJAG_00053","SJAG_00169","SJAG_04837","SJAG_00645","SJAG_02414","SJAG_03170","SJAG_03851","SJAG_04023","SJAG_02699","SJAG_04991","SJAG_04232","SJAG_02655","SJAG_00704","SJAG_02640","SJAG_04759"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77311],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035973"},{"annotations":[77133,60302,72525,72989,77312,72537,73840,80020,80657,72672,104955,79988,70939,78660,71132,80076,79073,93240,94958,71815,103930],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000045"},{"annotations":[70941,75850,72675],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097352"},{"annotations":[94959],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[107988,95848,89938,60551,74933,79946,97966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006914"},{"annotations":[80138,95776,72673,73476,74960,79074,72217,73811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000422"},{"annotations":[108928],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061736"},{"annotations":[73479,72219,73813,79075,80140,72677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[105255,91330,110647,93858,76503,77462,88532,111896,110199,102874,104081,105323,97639,88989,99439,115548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016236"},{"annotations":[80021,65945,72937,73484,80439,100318,77134,93242,94962,72990,95308,73841,111035,66153,72526,60779,77412,79989,70940,77313,115610],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000423"},{"annotations":[76617,72898],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0010507"},{"annotations":[107016],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0016242"},{"annotations":[72213,80134,79070,99732,108930,73807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044804"},{"annotations":[71819,73812,77595,72528,80139,72218,80079,73477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000425"},{"annotations":[73701,74771,80075,77310,72523,73483,72988,70673,77411,80438,72670,73839,79987,71882,72936,80019,73474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034727"},{"annotations":[109022,108931],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2000786"},{"annotations":[97955],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1901098"},{"annotations":[99776,73958,114964,112218,73938,99209,80272,110044],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0010508"},{"annotations":[69339],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903599"},{"annotations":[75783,106623],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0016239"},{"annotations":[89847],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140501"},{"annotations":[72981,80012,66159,66437,78746,79980],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010506"},{"annotations":[73478,80022,80081,99733,79990,90738,78562,108932,111036,116986,104724,72991,80441,74961,73486,77413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061709"},{"annotations":[80074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034517"},{"annotations":[60780,65944,67110,59467],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061753"}]},"cv_name":"biological_process","definition":"A cellular process involving delivery of a portion of the cytoplasm to lysosomes or to the plant or fungal vacuole that does not involve direct transport through the endocytic or vacuolar protein sorting (Vps) pathways. This process typically leads to degradation of the cargo; however, it can also be used to deliver resident proteins, such as in the cytoplasm-to-vacuole targeting (Cvt) pathway.","definition_xrefs":["PMID:22966490","PMID:28596378","PMID:21997368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":87,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00029":null,"SJAG_00053":null,"SJAG_00059":null,"SJAG_00079":null,"SJAG_00114":null,"SJAG_00115":null,"SJAG_00169":null,"SJAG_00284":null,"SJAG_00355":null,"SJAG_00380":null,"SJAG_00457":null,"SJAG_00645":null,"SJAG_00704":null,"SJAG_00724":null,"SJAG_00732":null,"SJAG_00763":null,"SJAG_00820":null,"SJAG_00824":null,"SJAG_00850":null,"SJAG_00974":null,"SJAG_01073":null,"SJAG_01135":null,"SJAG_01184":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01311":null,"SJAG_01367":null,"SJAG_01382":null,"SJAG_01415":null,"SJAG_01467":null,"SJAG_01509":null,"SJAG_01561":null,"SJAG_01716":null,"SJAG_01722":null,"SJAG_01783":null,"SJAG_01876":null,"SJAG_02100":null,"SJAG_02315":null,"SJAG_02414":null,"SJAG_02432":null,"SJAG_02433":null,"SJAG_02441":null,"SJAG_02525":null,"SJAG_02539":null,"SJAG_02640":null,"SJAG_02655":null,"SJAG_02699":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_02852":null,"SJAG_03100":null,"SJAG_03136":null,"SJAG_03170":null,"SJAG_03345":null,"SJAG_03371":null,"SJAG_03435":null,"SJAG_03467":null,"SJAG_03718":null,"SJAG_03799":null,"SJAG_03851":null,"SJAG_04021":null,"SJAG_04023":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04249":null,"SJAG_04294":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04552":null,"SJAG_04655":null,"SJAG_04759":null,"SJAG_04837":null,"SJAG_04860":null,"SJAG_04963":null,"SJAG_04991":null,"SJAG_05000":null,"SJAG_05017":null,"SJAG_05184":null,"SJAG_05210":null,"SJAG_05245":null,"SJAG_05261":null,"SJAG_05289":null,"SJAG_05346":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"process utilizing autophagic mechanism","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"termid":"GO:0061919","terms_by_termid":{"GO:0000045":null,"GO:0000422":null,"GO:0000423":null,"GO:0000425":null,"GO:0006914":null,"GO:0010506":null,"GO:0010507":null,"GO:0010508":null,"GO:0016236":null,"GO:0016239":null,"GO:0016240":null,"GO:0016242":null,"GO:0034517":null,"GO:0034727":null,"GO:0035973":null,"GO:0044804":null,"GO:0061709":null,"GO:0061723":null,"GO:0061736":null,"GO:0061753":null,"GO:0097352":null,"GO:0140501":null,"GO:1901098":null,"GO:1903599":null,"GO:2000786":null}}


id: MONDO:0001425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Rett syndrome (obsolete MONDO:0001425)","termid":"MONDO:0001425","xrefs":{"Monarch":{"xref_id":"0001425"}}}


id: GO:0044346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a fibroblast, a connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_apoptosis","GOC:yaf","GOC:jl","CL:0000057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibroblast apoptotic process","synonyms":[{"name":"fibroblast apoptosis","type":"narrow"}],"termid":"GO:0044346"}


id: MOD:00142
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the tetrapyrrole compound phytochromobilin.","definition_xrefs":["PubMed:1634523","PubMed:16593380","PubMed:3208761","PubMed:7918400","RESID:AA0133","Unimod:389#C","ChEBI:15619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-phytochromobilin-L-cysteine","synonyms":[{"name":"(2R,3R)-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-8,12-bis(2-carboxyethyl)-18-ethyl-2,7,13,17-tetramethyl-1,2,3,19,21,22,24-heptahydrobilin-1,19(21H,22H,24H)-dione","type":"exact"},{"name":"18-ethenyl-3-[1-((2-amino-2-carboxy)ethylsulfanyl)ethyl]-1,2,3,19,22,24-hexahydro-2,7,13,17-tetramethyl-1,19-dioxo-21H-biline-8,12-dipropanoic acid","type":"exact"},{"name":"BINDING Phytochromobilin chromophore (covalent; via 1 link)","type":"exact"},{"name":"Phytochromobilin","type":"related"},{"name":"S-phytochromobilin-L-cysteine","type":"exact"},{"name":"phytochrome chromophore","type":"exact"},{"name":"phytochromobilin","type":"related"},{"name":"phytochromobilin cysteine adduct","type":"exact"}],"termid":"MOD:00142"}


id: PBO:0028843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_heterochromatin_assembly","termid":"PBO:0028843"}


id: GO:0018185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine by the addition of an N6-propylamino and of propylmethylamino units, forming N6-(propylamino-poly(propylmethylamino)-propyldimethylamine)-L-lysine, typical of the silicate binding protein silaffin.","definition_xrefs":["RESID:AA0278"],"gene_count":0,"genotype_count":0,"name":"obsolete poly-N-methyl-propylamination (obsolete GO:0018185)","termid":"GO:0018185"}


id: PBO:0011500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF953 thioredoxin family protein","termid":"PBO:0011500"}


id: PBO:0081667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 587 pseudogene 1","termid":"PBO:0081667"}


id: PBO:0047077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member F, pseudogene","termid":"PBO:0047077"}


id: PBO:0089471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51-bS1m","termid":"PBO:0089471"}


id: PBO:0075197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 9","termid":"PBO:0075197"}


id: GO:0046283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving anthocyanins, any member of a group of intensely colored soluble glycosides of anthocyanidins that occur in plants. They are responsible from most of the scarlet, purple, mauve and blue coloring in higher plants, especially of flowers.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anthocyanin-containing compound metabolic process","synonyms":[{"name":"anthocyanin metabolic process","type":"exact"},{"name":"anthocyanin metabolism","type":"exact"}],"termid":"GO:0046283"}


id: GO:0072590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N-acetyl-L-aspartate + L-glutamate = ADP + phosphate + N-acetylaspartyl-glutamate.","definition_xrefs":["PMID:20657015","PMID:20643647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acetyl-L-aspartate-L-glutamate ligase activity","secondary_identifiers":["Reactome:R-HSA-8942575"],"termid":"GO:0072590"}


id: GO:0032355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen.","definition_xrefs":["GOC:mah","ISBN:0911910123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to estradiol","synonyms":[{"name":"response to E2 stimulus","type":"exact"},{"name":"response to estradiol stimulus","type":"exact"}],"termid":"GO:0032355"}


id: PBO:0030349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-complete_but_unequal_mitotic_sister_chromatid_segregation","termid":"PBO:0030349"}


id: FYPO:0004568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the mitotic or meiotic spindle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal spindle","termid":"FYPO:0004568"}


id: PBO:0046018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF2AK3 divergent transcript","termid":"PBO:0046018"}


id: GO:0090089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of dipeptide transport. Dipeptide transport is the directed movement of a dipeptide, a combination of two amino acids by means of a peptide (-CO-NH-) link, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oligopeptide transport","termid":"GO:0090088"},{"relation_name":"regulates","term_name":"dipeptide transport","termid":"GO:0042938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of dipeptide transport","termid":"GO:0090089"}


id: PBO:0068132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 439","termid":"PBO:0068132"}


id: PBO:0075454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 5 like 1","termid":"PBO:0075454"}


id: GO:0080028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nitrile, an organic compound containing trivalent nitrogen attached to one carbon atom.","definition_xrefs":["PMID:18987211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrile biosynthetic process","termid":"GO:0080028"}


id: MONDO:0017069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality in which the spinal cord and meninges protrude through a defect in the spinal column. The protrusion is above the skin surface.","definition_xrefs":["NCIT:C101201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated spina bifida","termid":"MONDO:0019351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"spina bifida cystica","secondary_identifiers":["MESH:D016137","NANDO:2100215","NANDO:2200814","MEDGEN:21277","NANDO:1200509","MedDRA:10071011","UMLS:C0037917","Orphanet:268744","GARD:20958","icd11.foundation:979482551"],"synonyms":[{"name":"meningomyelocele","type":"exact"},{"name":"myelomeningocele","type":"narrow"},{"name":"open spina bifida","type":"related"},{"name":"spina bifida aperta","type":"related"},{"name":"spina bifida manifesta","type":"related"},{"name":"spina bifida, open","type":"related"}],"termid":"MONDO:0017069","xrefs":{"Monarch":{"xref_id":"0017069"}}}


id: MONDO:0015099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"unilateral polymicrogyria","termid":"MONDO:0017092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"unilateral hemispheric polymicrogyria","secondary_identifiers":["Orphanet:101071","GARD:19777","icd11.foundation:1318599015","UMLS:C5681804","MEDGEN:1842283"],"termid":"MONDO:0015099","xrefs":{"Monarch":{"xref_id":"0015099"}}}


id: PBO:0046686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein subunit alpha","termid":"PBO:0046686"}


id: GO:0075312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporangium development, a process that leads to the formation of sporangium, a single-celled or many-celled structure in which spores are produced, as in fungi, algae, mosses, and ferns, gymnosperms, angiosperms.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of sporangium development","termid":"GO:0075310"},{"relation_name":"negatively_regulates","term_name":"sporangium development","termid":"GO:0043582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporangium development","termid":"GO:0075312"}


id: GO:0008879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 1-phosphate + dTTP = diphosphate + dTDP-glucose.","definition_xrefs":["RHEA:15225","EC:2.7.7.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"glucose-1-phosphate thymidylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02328","MetaCyc:DTDPGLUCOSEPP-RXN"],"synonyms":[{"name":"TDP-glucose pyrophosphorylase activity","type":"related"},{"name":"dTDP-glucose diphosphorylase activity","type":"related"},{"name":"dTDP-glucose pyrophosphorylase activity","type":"related"},{"name":"dTDP-glucose synthase activity","type":"related"},{"name":"dTTP:alpha-D-glucose-1-phosphate thymidylyltransferase activity","type":"related"},{"name":"glucose 1-phosphate thymidylyltransferase activity","type":"related"},{"name":"thymidine diphosphate glucose pyrophosphorylase activity","type":"related"},{"name":"thymidine diphosphoglucose pyrophosphorylase activity","type":"related"}],"termid":"GO:0008879"}


id: PBO:0053592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 619","termid":"PBO:0053592"}


id: GO:0098898
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the dense core granule membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"dense core granule","termid":"GO:0031045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"dense core granule lumen","synonyms":[{"name":"dense core vesicle lumen","type":"exact"}],"termid":"GO:0098898"}


id: GO:0007065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the sister chromatids of a replicated chromosome along the entire length of the chromosome that occurs during meiosis in a male.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic sister chromatid cohesion","termid":"GO:0051177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"male meiosis sister chromatid cohesion","termid":"GO:0007065"}


id: PBO:0081455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 322","termid":"PBO:0081455"}


id: FYPO:0006976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during the meiotic cell cycle is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level","termid":"FYPO:0000840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during meiotic cell cycle","synonyms":[{"name":"normal RNA accumulation during meiotic cell cycle","type":"related"},{"name":"normal cellular RNA level during meiotic cell cycle","type":"exact"},{"name":"normal mRNA level during meiotic cell cycle","type":"narrow"},{"name":"normal transcript level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006976"}


id: MONDO:0008922
data:
  {"annotated_genes":["SJAG_00404"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86021],"is_not":false,"summary":null,"term":"MONDO:0008922"}]},"cv_name":"mondo","definition":"Congenital cataract - hypertrophic cardiomyopathy - mitochrondrial myopathy (CCM) is a mitochondrial disease characterized by cataracts, hypertrophic cardiomyopathy, muscle weakness and lactic acidosis after exercise.","definition_xrefs":["Orphanet:1369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial substrate carrier disorder","termid":"MONDO:0016801"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00404":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005267","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"Sengers syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:717812000","UMLS:C1859317","DOID:0080132","MEDGEN:395228","GARD:1142","OMIM:212350","MESH:C538280"],"synonyms":[{"name":"Sengers syndrome","type":"exact"},{"name":"cardiomyopathic mitochondrial DNA depletion syndrome 10","type":"related"},{"name":"cardiomyopathy and cataract","type":"related"},{"name":"cataract and cardiomyopathy","type":"related"},{"name":"congenital cataract-hypertrophic cardiomyopathy-mitochondrial myopathy syndrome","type":"related"},{"name":"mitochondrial DNA depletion syndrome 10","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 10 (Cardiomyopathic type)","type":"related"}],"termid":"MONDO:0008922","terms_by_termid":{"MONDO:0008922":null},"xrefs":{"Monarch":{"xref_id":"0008922"}}}


id: MONDO:1011645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular arrhythmias and sudden death, non-human animal","secondary_identifiers":["OMIA:001040"],"termid":"MONDO:1011645","xrefs":{"Monarch":{"xref_id":"1011645"}}}


id: GO:0097655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the serpin protein family (serine protease inhibitors or classified inhibitor family I4). Serpins are a broadly distributed family of protease inhibitors that use a conformational change to inhibit target enzymes. They are central in controlling many important proteolytic cascades. The majority of serpins inhibit serine proteases, but serpins that inhibit caspases and papain-like cysteine proteases have also been identified. Rarely, serpins perform a non-inhibitory function; for example, several human serpins function as hormone transporters and certain serpins function as molecular chaperones or tumor suppressors.","definition_xrefs":["GOC:mr","InterPro:IPR000215","PMID:16737556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"serpin family protein binding","termid":"GO:0097655"}


id: GO:0075079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont receptor-mediated signal transduction (obsolete GO:0075079)","termid":"GO:0075079"}


id: GO:1900372
data:
  {"annotated_genes":["SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of purine nucleotide biosynthetic processes.","definition_xrefs":["GOC:go_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide biosynthetic process","termid":"GO:0030809"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide biosynthetic process","termid":"GO:1900371"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"negatively_regulates","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"negative regulation of purine nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of purine nucleotide anabolism","type":"exact"},{"name":"down regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"down regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"down regulation of purine nucleotide formation","type":"exact"},{"name":"down regulation of purine nucleotide synthesis","type":"exact"},{"name":"down-regulation of purine nucleotide anabolism","type":"exact"},{"name":"down-regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"down-regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"down-regulation of purine nucleotide formation","type":"exact"},{"name":"down-regulation of purine nucleotide synthesis","type":"exact"},{"name":"downregulation of purine nucleotide anabolism","type":"exact"},{"name":"downregulation of purine nucleotide biosynthesis","type":"exact"},{"name":"downregulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"downregulation of purine nucleotide formation","type":"exact"},{"name":"downregulation of purine nucleotide synthesis","type":"exact"},{"name":"inhibition of purine nucleotide anabolism","type":"exact"},{"name":"inhibition of purine nucleotide biosynthesis","type":"exact"},{"name":"inhibition of purine nucleotide biosynthetic process","type":"narrow"},{"name":"inhibition of purine nucleotide formation","type":"exact"},{"name":"inhibition of purine nucleotide synthesis","type":"exact"},{"name":"negative regulation of purine nucleotide anabolism","type":"exact"},{"name":"negative regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"negative regulation of purine nucleotide formation","type":"exact"},{"name":"negative regulation of purine nucleotide synthesis","type":"exact"}],"termid":"GO:1900372","terms_by_termid":{"GO:1905707":null}}


id: PBO:0076634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transducin beta like 1 Y-linked pseudogene 1","termid":"PBO:0076634"}


id: FYPO:0001721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the export of sodium ions out of a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal sodium export","synonyms":[{"name":"abnormal cellular sodium export","type":"exact"},{"name":"abnormal sodium export during mitotic cell cycle","type":"related"},{"name":"abnormal sodium export during vegetative growth","type":"exact"},{"name":"abnormal sodium export from cell","type":"exact"},{"name":"abnormal sodium ion export","type":"exact"}],"termid":"FYPO:0001721"}


id: PBO:0060377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYBPC2 cis regulating lncRNA enhancer of myogenesis","termid":"PBO:0060377"}


id: GO:0035781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of CD86, a CD marker that occurs on antigen presenting cells that provides co-stimulatory signals necessary for T cell activation and survival.","definition_xrefs":["GOC:BHF","GOC:ebc"],"gene_count":0,"genotype_count":0,"name":"obsolete CD86 biosynthetic process (obsolete GO:0035781)","synonyms":[{"name":"CD86 anabolism","type":"exact"},{"name":"CD86 biosynthesis","type":"exact"},{"name":"CD86 formation","type":"exact"},{"name":"CD86 synthesis","type":"exact"}],"termid":"GO:0035781"}


id: PBO:0029410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_response_to_mitotic_G2/M_transition_checkpoint_signaling","termid":"PBO:0029410"}


id: GO:0035512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydrolytic removal of the methyl group from one or more nucleotides within a DNA molecule.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrolytic DNA demethylation (obsolete GO:0035512)","termid":"GO:0035512"}


id: PR:Q10238
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic PUF family protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.05","synonyms":[{"name":"Spom972h-mpf1","type":"exact"}],"termid":"PR:Q10238"}


id: FYPO:0002475
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the region of a chromosome at which a DNA double-strand break has occurred is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to double-strand break site","termid":"FYPO:0002473"},{"relation_name":"is_a","term_name":"increased protein localization to chromosome during vegetative growth","termid":"FYPO:0002840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to double-strand break site","synonyms":[{"name":"increased protein localisation to double-strand break site","type":"exact"},{"name":"increased protein localization to DSB site","type":"exact"},{"name":"increased protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"increased protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"increased protein localization to site of double-strand break","type":"exact"}],"termid":"FYPO:0002475"}


id: FYECO:0000075
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which NADP+ was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ NADP+","termid":"FYECO:0000075"}


id: PBO:0032724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_centromere_central_core","termid":"PBO:0032724"}


id: MONDO:0017914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pure or complex autosomal dominant spastic paraplegia (obsolete MONDO:0017914)","secondary_identifiers":["Orphanet:320342"],"synonyms":[{"name":"Pure or complicated autosomal dominant spastic paraplegia","type":"exact"}],"termid":"MONDO:0017914","xrefs":{"Monarch":{"xref_id":"0017914"}}}


id: GO:0019417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting the addition of oxygen to elemental sulfur.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"sulfur oxidation","synonyms":[{"name":"sulphur oxidation","type":"exact"}],"termid":"GO:0019417"}


id: MONDO:0024547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pancreatic agenesis in which the cause of the disease is a mutation in the PDX1 gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic agenesis","termid":"MONDO:0009832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic agenesis 1","secondary_identifiers":["GARD:15220","UMLS:C3891828","MEDGEN:856095","OMIM:260370"],"synonyms":[{"name":"PAGEN1","type":"related"},{"name":"PDX1 pancreatic agenesis","type":"exact"},{"name":"Pagen","type":"related"},{"name":"pancreatic agenesis 1","type":"exact"},{"name":"pancreatic agenesis caused by mutation in PDX1","type":"exact"},{"name":"pancreatic hypoplasia, congenital","type":"related"}],"termid":"MONDO:0024547","xrefs":{"Monarch":{"xref_id":"0024547"}}}


id: SO:0001970
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant occurring within an intron of a non coding transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_coding_transcript_variant","termid":"SO:0001619"},{"relation_name":"is_a","term_name":"intron_variant","termid":"SO:0001627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_coding_transcript_intron_variant","synonyms":[{"name":"ANNOVAR:ncRNA_intronic","type":"narrow"},{"name":"Jannovar:non_coding_transcript_intron_variant","type":"narrow"},{"name":"non coding transcript intron variant","type":"exact"}],"termid":"SO:0001970"}


id: PBO:0043197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 5","termid":"PBO:0043197"}


id: GO:0072342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of anion stress, an increase or decrease in the concentration of negatively charged ions in the environment.","definition_xrefs":["GOC:cvs","PMID:19641131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to salt stress","termid":"GO:0009651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anion stress","termid":"GO:0072342"}


id: GO:0038184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by a ligand binding to a bile acid receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:36409000","PMID:12419312","PMID:19442546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"is_a","term_name":"bile acid signaling pathway","termid":"GO:0038183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-activating G protein-coupled bile acid receptor signaling pathway","synonyms":[{"name":"cell surface bile acid receptor signaling pathway","type":"broad"},{"name":"membrane bile acid receptor signaling pathway","type":"related"}],"termid":"GO:0038184"}


id: PBO:0051848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 3","termid":"PBO:0051848"}


id: MONDO:1011611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Von Willebrand disease that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Von Willebrand disease, non-human animal","termid":"MONDO:1011411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Von Willebrand disease, cattle","secondary_identifiers":["OMIA:001056-9913"],"termid":"MONDO:1011611","xrefs":{"Monarch":{"xref_id":"1011611"}}}


id: SO:0001462
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of contigs.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"contig","termid":"SO:0000149"},{"relation_name":"is_a","term_name":"sequence_conflict","termid":"SO:0001085"},{"relation_name":"is_a","term_name":"sequence_collection","termid":"SO:0001260"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contig_collection","synonyms":[{"name":"contig collection","type":"exact"}],"termid":"SO:0001462"}


id: PBO:0040617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 antagonist/killer 1 pseudogene 2","termid":"PBO:0040617"}


id: MONDO:0005905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Excessive periodic leg movements during sleep that cause micro-arousals and interfere with the maintenance of sleep. This condition induces a state of relative sleep deprivation which manifests as excessive daytime hypersomnolence. The movements are characterized by repetitive contractions of the tibialis anterior muscle, extension of the toe, and intermittent flexion of the hip, knee and ankle. (Adams et al., Principles of Neurology, 6th ed, p387)","definition_xrefs":["MESH:D020189"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mental disorder","termid":"MONDO:0005084"},{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodic limb movement disorder","secondary_identifiers":["UMLS:C0751774","EFO:0007428","DOID:9207","icd11.foundation:1846518306","MEDGEN:199731","ICD10CM:G47.61","SCTID:418763003","ICD9:327.51"],"synonyms":[{"name":"nocturnal myoclonus","type":"exact"}],"termid":"MONDO:0005905","xrefs":{"Monarch":{"xref_id":"0005905"}}}


id: GO:0008399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the conversion of naphthalene to naphthalene 1,2-oxide.","definition_xrefs":["PMID:1742282","PMID:1981702"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthalene hydroxylase activity (obsolete GO:0008399)","synonyms":[{"name":"cytochrome P450 CYP2F2","type":"narrow"}],"termid":"GO:0008399"}


id: MONDO:0013211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dilated cardiomyopathy that has material basis in mutation in the TNNI3 gene on chromosome 19q13.42.","definition_xrefs":["DOID:0110459","PMID:19590045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1FF","secondary_identifiers":["MEDGEN:412876","GARD:15643","UMLS:C2750091","MESH:C567654","OMIM:613286"],"synonyms":[{"name":"CMD1FF","type":"exact"},{"name":"cardiomyopathy, dilated, 1FF","type":"related"},{"name":"cardiomyopathy, dilated, type 1Ff","type":"exact"},{"name":"dilated cardiomyopathy type 1FF","type":"exact"}],"termid":"MONDO:0013211","xrefs":{"Monarch":{"xref_id":"0013211"}}}


id: GO:0102676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: avenasterol + O2 + NADPH + H+ = 5-dehydroavenasterol + 2 H2O + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete avenasterol-desaturase activity (obsolete GO:0102676)","termid":"GO:0102676"}


id: PBO:0053851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1120","termid":"PBO:0053851"}


id: MOD:00951
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of a peptide or protein L-glutamic acid residue to gamma-carboxyglutamic acid with secondary loss of a neutral carbon dioxide molecular fragment.","definition_xrefs":["DeltaMass:58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamic acid residue","termid":"MOD:00015"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"modified residue with neutral loss of carbon dioxide","termid":"MOD:00957"},{"relation_name":"is_a","term_name":"decarboxylated residue","termid":"MOD:00960"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-gamma-carboxyglutamic acid with neutral loss of carbon dioxide","synonyms":[{"name":"d4CbxGlu","type":"exact"}],"termid":"MOD:00951"}


id: PBO:0081957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZP3 pseudogene 1","termid":"PBO:0081957"}


id: GO:0016487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the sesquiterpenoid alcohol farnesol, 3,7,11-trimethyl-2,6,10,dodecatrien-1-ol.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"polyprenol metabolic process","termid":"GO:0016093"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"farnesol metabolic process","synonyms":[{"name":"farnesol metabolism","type":"exact"}],"termid":"GO:0016487"}


id: PBO:0070152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 66 pseudogene","termid":"PBO:0070152"}


id: PBO:0015658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear 3'-tRNA processing endonuclease tRNAse Z, Trz1","termid":"PBO:0015658"}


id: PBO:0073550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHANK2 antisense RNA 2","termid":"PBO:0073550"}


id: GO:1900257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of beta1-adrenergic receptor activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of beta1-adrenergic receptor activity (obsolete GO:1900257)","synonyms":[{"name":"down regulation of beta1 adrenoceptor","type":"exact"},{"name":"down regulation of beta1-adrenergic receptor activity","type":"exact"},{"name":"down-regulation of beta1 adrenoceptor","type":"exact"},{"name":"down-regulation of beta1-adrenergic receptor activity","type":"exact"},{"name":"downregulation of beta1 adrenoceptor","type":"exact"},{"name":"downregulation of beta1-adrenergic receptor activity","type":"exact"},{"name":"inhibition of beta1 adrenoceptor","type":"exact"},{"name":"inhibition of beta1-adrenergic receptor activity","type":"narrow"},{"name":"negative regulation of beta1 adrenoceptor","type":"exact"}],"termid":"GO:1900257"}


id: GO:0007557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone metabolic process","termid":"GO:0007556"},{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"regulates","term_name":"juvenile hormone biosynthetic process","termid":"GO:0006718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0006629"],"is_obsolete":false,"name":"regulation of juvenile hormone biosynthetic process","synonyms":[{"name":"regulation of juvenile hormone anabolism","type":"exact"},{"name":"regulation of juvenile hormone biosynthesis","type":"exact"},{"name":"regulation of juvenile hormone formation","type":"exact"},{"name":"regulation of juvenile hormone synthesis","type":"exact"}],"termid":"GO:0007557"}


id: PBO:0059313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L53","termid":"PBO:0059313"}


id: PBO:0011408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_has_output","termid":"PBO:0011408"}


id: PBO:0071244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 85","termid":"PBO:0071244"}


id: SO:1000150
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal translocation whereby three breaks occurred in three different chromosomes. The centric segment resulting from the first break listed is joined to the acentric segment resulting from the second, rather than the third.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interchromosomal_translocation","termid":"SO:0002060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic_translocation","synonyms":[{"name":"cyclic translocation","type":"exact"}],"termid":"SO:1000150"}


id: PBO:0117145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNRC18 antisense RNA 1","termid":"PBO:0117145"}


id: GO:0038091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a platelet-derived growth factor receptor (PDGFR) on the surface of a cell, which activates or increases the frequency, rate or extent of cell proliferation.","definition_xrefs":["PMID:17470632","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"VEGF-activated platelet-derived growth factor receptor signaling pathway","termid":"GO:0038086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway","synonyms":[{"name":"VEGF-A-induced cell proliferation","type":"narrow"},{"name":"positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signalling pathway","type":"exact"},{"name":"positive regulation of cell proliferation by VEGF/PDGFR signaling pathway","type":"exact"}],"termid":"GO:0038091"}


id: PBO:0067422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 541, pseudogene","termid":"PBO:0067422"}


id: MONDO:0030016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0030016 (obsolete MONDO:0030016)","termid":"MONDO:0030016","xrefs":{"Monarch":{"xref_id":"0030016"}}}


id: PBO:0087617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the conserved chromosomal passenger complex (CPC); complex regulates kinetochore-microtubule attachments, activation of the spindle tension checkpoint, and mitotic spindle disassembly; other complex members are Ipl1p, Bir1p, and Nbl1p","termid":"PBO:0087617"}


id: PBO:0012218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_movement_of","termid":"PBO:0012218"}


id: PBO:0038897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor A3","termid":"PBO:0038897"}


id: PATO:0001633
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the rear of an organism relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior to","synonyms":[{"name":"posterior (human torso)","type":"exact"},{"name":"superior (human head)","type":"exact"}],"termid":"PATO:0001633"}


id: MONDO:0019045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare form of sleep disorder.","gene_count":0,"genotype_count":0,"name":"obsolete rare sleep disorder (obsolete MONDO:0019045)","secondary_identifiers":["Orphanet:68354","MedDRA:10040984","MESH:D012893"],"synonyms":[{"name":"rare sleep disorder","type":"exact"},{"name":"rare sleep wake disorder","type":"exact"},{"name":"rare sleep-wake disorder","type":"exact"}],"termid":"MONDO:0019045","xrefs":{"Monarch":{"xref_id":"0019045"}}}


id: PBO:0072427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 1","termid":"PBO:0072427"}


id: MONDO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the arteries that is characterized by the presence of granulomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteritis","termid":"MONDO:0043494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granulomatous angiitis","secondary_identifiers":["MEDGEN:9088","NCIT:C34653","MESH:D020293","DOID:2555","UMLS:C0018202"],"synonyms":[{"name":"Granulomatous arteritis","type":"exact"}],"termid":"MONDO:0002341","xrefs":{"Monarch":{"xref_id":"0002341"}}}


id: PBO:0044639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping mRNA 1B","termid":"PBO:0044639"}


id: PBO:0086344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudouridine synthase; catalyzes pseudouridylation at positions 35 and 56 in U2 snRNA, position 50 in 5S rRNA, position 13 in cytoplasmic tRNAs, and position 35 in pre-tRNA(Tyr); also pseudouridylates some mRNAs; relocates from nucleus to cytoplasm during heat shock and differentially modifies some mRNAs during heat shock; conserved in archaea, vertebrates, and some bacteria","termid":"PBO:0086344"}


id: GO:0051196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a coenzyme.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of coenzyme metabolic process (obsolete GO:0051196)","synonyms":[{"name":"regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"regulation of coenzyme metabolism","type":"exact"}],"termid":"GO:0051196"}


id: PBO:0002259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Arp9","termid":"PBO:0002259"}


id: PBO:0079039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-1","termid":"PBO:0079039"}


id: PBO:0056947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 15a","termid":"PBO:0056947"}


id: PBO:0043644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 5 pseudogene 1","termid":"PBO:0043644"}


id: MONDO:0003572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A nonkeratinizing carcinoma which occurs predominantly in the nasopharynx but also in the tonsils and rarely in other anatomic sites. It is characterized by the presence of large malignant cells with vesicular nuclei, prominent nucleoli, syncytial growth pattern, and a lymphoplasmacytic infiltrate.","definition_xrefs":["NCIT:C4107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large cell carcinoma","termid":"MONDO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nasopharyngeal type undifferentiated carcinoma","secondary_identifiers":["ICDO:8082/3","MEDGEN:87199","UMLS:C0334254","DOID:5660"],"synonyms":[{"name":"Schmincke tumor","type":"exact"},{"name":"Schmincke tumour","type":"exact"},{"name":"Schminke tumor","type":"exact"},{"name":"Schminke tumour","type":"exact"},{"name":"lymphoepithelial carcinoma","type":"exact"},{"name":"lymphoepithelioma","type":"exact"},{"name":"lymphoepithelioma-like carcinoma","type":"exact"},{"name":"nasopharyngeal type undifferentiated carcinoma","type":"exact"}],"termid":"MONDO:0003572","xrefs":{"Monarch":{"xref_id":"0003572"}}}


id: PBO:0050973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon omega 1 pseudogene 18","termid":"PBO:0050973"}


id: PBO:0036052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036052"}


id: MONDO:0019937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare gynecologic or obstetric disease (obsolete MONDO:0019937)","secondary_identifiers":["Orphanet:96344"],"termid":"MONDO:0019937","xrefs":{"Monarch":{"xref_id":"0019937"}}}


id: MONDO:0044218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete beeturia (obsolete MONDO:0044218)","secondary_identifiers":["OMIM:109600"],"synonyms":[{"name":"BEETURIA","type":"related"},{"name":"Betacyaninuria","type":"related"}],"termid":"MONDO:0044218","xrefs":{"Monarch":{"xref_id":"0044218"}}}


id: PBO:0076861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 11","termid":"PBO:0076861"}


id: PBO:0000227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Par A family ATPase/WD repeat iron cluster assembly fusion protein (predicted)","termid":"PBO:0000227"}


id: PBO:0053817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1078","termid":"PBO:0053817"}


id: PBO:0055553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2989","termid":"PBO:0055553"}


id: MONDO:0020602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Simpson-Golabi-Behmel syndrome in which the cause of the disease is a mutation in the GPC3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"Simpson-Golabi-Behmel syndrome","termid":"MONDO:0010731"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Simpson-Golabi-Behmel syndrome type 1","secondary_identifiers":["OMIM:312870","DOID:0060248","UMLS:C0796154","MEDGEN:162917"],"synonyms":[{"name":"DGSX Golabi-Rosen syndrome","type":"exact"},{"name":"GPC3 Simpson-Golabi-Behmel syndrome","type":"exact"},{"name":"Golabi-Rosen syndrome","type":"related"},{"name":"SGBS1","type":"exact"},{"name":"Sgbs","type":"related"},{"name":"Simpson dysmorphia syndrome","type":"exact"},{"name":"Simpson-Golabi-Behmel syndrome caused by mutation in GPC3","type":"exact"},{"name":"Simpson-Golabi-Behmel syndrome type 1","type":"exact"},{"name":"Simpson-Golabi-Behmel syndrome, type 1","type":"related"},{"name":"Simpson-Golabi-Behmel syndrome, type 1, X-linked recessive","type":"exact"},{"name":"bulldog syndrome","type":"exact"},{"name":"dysplasia gigantism syndrome, X-linked","type":"related"}],"termid":"MONDO:0020602","xrefs":{"Monarch":{"xref_id":"0020602"}}}


id: PBO:0084705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial hsp70-type molecular chaperone; required for assembly of iron/sulfur clusters into proteins at a step after cluster synthesis; involved in maturation of Grx5p and Yfh1p, which is a homolog of human frataxin implicated in Friedreich's ataxia","termid":"PBO:0084705"}


id: GO:0050266
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: caffeoyl-CoA + 3-(3,4-dihydroxyphenyl)lactate = CoA + rosmarinate.","definition_xrefs":["EC:2.3.1.140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"rosmarinate synthase activity","secondary_identifiers":["MetaCyc:RXN-7633","RHEA:22344"],"synonyms":[{"name":"4-coumaroyl-CoA:4-hydroxyphenyllactic acid 4-coumaroyl transferase activity","type":"related"},{"name":"caffeoyl-CoA:3-(3,4-dihydroxyphenyl)lactate 2'-O-caffeoyl-transferase activity","type":"related"},{"name":"caffeoyl-coenzyme A:3,4-dihydroxyphenyllactic acid caffeoyltransferase activity","type":"related"},{"name":"rosmarinic acid synthase activity","type":"related"}],"termid":"GO:0050266"}


id: FYPO:0005665
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[119847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003315"},{"annotations":[119781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002026"},{"annotations":[119528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the amount, distribution, or morphology of all or part of the actin cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton","termid":"FYPO:0002397"},{"relation_name":"output_of","term_name":"abnormal actin cytoskeleton organization","termid":"FYPO:0004803"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":4,"genotypes_by_uniquename":{"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04522","SJAG_04280"],"name":"abnormal actin cytoskeleton","references_by_uniquename":{"PMID:25866389":null,"PMID:30664646":null,"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_04522","SJAG_04703"],"single_locus_genotype_uniquenames":["pom1delta","rga4delta","for3delta"],"synonyms":[{"name":"abnormal actin cytoskeleton physical object quality","type":"exact"}],"termid":"FYPO:0005665","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000338":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0042620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDV3 pseudogene 1","termid":"PBO:0042620"}


id: MONDO:0100109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare condition comprising a triad of unilateral renal agenesis, ipsilateral seminal vesicle obstruction and ipsilateral ejaculatory duct obstruction.","definition_xrefs":["PMID:30258511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinner syndrome","termid":"MONDO:0100109","xrefs":{"Monarch":{"xref_id":"0100109"}}}


id: GO:1904585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a putrescine stimulus.","definition_xrefs":["PMID:20805360","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to putrescine","synonyms":[{"name":"response to 1,4-Butanediamine","type":"exact"},{"name":"response to 1,4-Diaminobutane","type":"exact"},{"name":"response to tetramethylenediamine","type":"exact"}],"termid":"GO:1904585"}


id: PBO:0057109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 199a-1","termid":"PBO:0057109"}


id: FYPO:0004648
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly of the mitotic spindle begins later than normal.","definition_xrefs":["PomBase:mah","GO:0090307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly","termid":"FYPO:0000177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0000337","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000054"],"is_obsolete":false,"name":"delayed onset of mitotic spindle assembly","synonyms":[{"name":"delayed mitotic spindle assembly","type":"exact"},{"name":"delayed onset of abnormal mitotic spindle assembly during vegetative growth","type":"exact"},{"name":"delayed onset of bipolar mitotic spindle formation","type":"exact"},{"name":"delayed onset of spindle assembly during mitotic cell cycle","type":"exact"},{"name":"delayed onset of spindle assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0004648"}


id: FYPO:0000855
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning in regions of heterochromatin is abnormal. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GO:0016584","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning","termid":"FYPO:0000853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"abnormal nucleosome positioning in heterochromatin","synonyms":[{"name":"abnormal nucleosome occupancy in heterochromatin","type":"related"},{"name":"abnormal nucleosome positioning in heterochromatin during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome positioning in heterochromatin during vegetative growth","type":"exact"},{"name":"abnormal nucleosome spacing in heterochromatin","type":"exact"}],"termid":"FYPO:0000855"}


id: MONDO:0010250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 49","secondary_identifiers":["Orphanet:485350","DOID:0112060","MEDGEN:923000","GARD:17880","OMIM:300114","UMLS:C0796221"],"synonyms":[{"name":"CLCN4-related X-linked intellectual disability syndrome","type":"exact"},{"name":"MRX49","type":"exact"},{"name":"Raynaud-Claes syndrome, X-linked dominant","type":"exact"},{"name":"intellectual disability, X-linked 15","type":"exact"},{"name":"intellectual disability, X-linked 49","type":"exact"},{"name":"mental retardation, X-linked 15","type":"exact"},{"name":"mental retardation, X-linked 49","type":"related"}],"termid":"MONDO:0010250","xrefs":{"Monarch":{"xref_id":"0010250"}}}


id: GO:0080185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A symbiont process in which a molecule secreted by the symbiont activates a resistance gene-dependent defense response signaling pathway in the plant host, in order to activate a hypersensitive response to induce necrosis. In the plant, this process involves the direct or indirect recognition of the symbiont effector protein for example through plant resistance receptor or R proteins (or R genes).","definition_xrefs":["PMID:22241993","PMID:23411798","PMID:27641772","PMID:16497589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"effector-mediated activation of host programmed cell death by symbiont","termid":"GO:0034055"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host resistance gene-dependent defense response","termid":"GO:0052158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated activation of plant hypersensitive response by symbiont","secondary_identifiers":["GO:0052527","GO:0052423","GO:0052101","GO:0052286","Wikipedia:Effector-triggered_immunity"],"synonyms":[{"name":"ETI triggered of host innate immune response","type":"related"},{"name":"ETI-triggered of host innate immune response","type":"related"},{"name":"activation by organism of defense response in host by specific elicitors","type":"broad"},{"name":"activation by organism of host gene-for-gene resistance","type":"exact"},{"name":"activation by organism of host resistance gene-dependent defense response","type":"exact"},{"name":"activation by symbiont of host resistance gene-dependent defense response","type":"exact"},{"name":"activation of HR","type":"narrow"},{"name":"activation of hypersensitive response","type":"narrow"},{"name":"avirulence protein","type":"related"},{"name":"effector-mediated induction of plant hypersensitive response by symbiont","type":"exact"},{"name":"effector-triggered immunity","type":"broad"},{"name":"effector-triggered induction of host innate immune response","type":"related"},{"name":"effector-triggered induction of plant hypersensitive response by symbiont","type":"related"},{"name":"effector-triggered necrosis","type":"related"},{"name":"induction by organism of defense response in host by specific elicitors","type":"broad"},{"name":"induction by organism of host gene-for-gene resistance","type":"exact"},{"name":"induction by organism of pathogen-race/host plant cultivar-specific resistance in host","type":"broad"},{"name":"induction by organism of resistance gene-dependent defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by symbiont of host resistance gene-dependent defense response","type":"exact"},{"name":"induction of effector-triggered immunity (ETI)","type":"related"},{"name":"necrotrophic effector","type":"related"},{"name":"positive regulation by organism of defense response in host by specific elicitors","type":"broad"},{"name":"positive regulation by organism of host gene-for-gene resistance","type":"exact"},{"name":"positive regulation by symbiont of host resistance gene-dependent defense response","type":"related"},{"name":"positive regulation by symbiont of plant HR","type":"exact"},{"name":"positive regulation by symbiont of plant hypersensitive response","type":"exact"}],"termid":"GO:0080185"}


id: MONDO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the cardiovascular system.","definition_xrefs":["NCIT:C114940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"cardiovascular neoplasm","termid":"MONDO:0024757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cardiovascular cancer","secondary_identifiers":["MEDGEN:858066","DOID:176","UMLS:C3898472"],"synonyms":[{"name":"cancer of cardiovascular system","type":"exact"},{"name":"cardiovascular neoplasm","type":"broad"},{"name":"cardiovascular system cancer","type":"exact"},{"name":"cardiovascular tumors","type":"exact"},{"name":"cardiovascular tumours","type":"exact"},{"name":"malignant cardiovascular neoplasm","type":"exact"},{"name":"malignant cardiovascular system neoplasm","type":"exact"},{"name":"malignant neoplasm of cardiovascular system","type":"exact"}],"termid":"MONDO:0002100","xrefs":{"Monarch":{"xref_id":"0002100"}}}


id: FYPO:0001350
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype that affects the organization of the microtubule cytoskeleton in the vegetative growth phase of the life cycle. Microtubule cytoskeleton organization is a cellular process that results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins.","definition_xrefs":["GO:0000226","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization","termid":"FYPO:0000054"},{"relation_name":"is_a","term_name":"abnormal cytoskeleton organization during vegetative growth","termid":"FYPO:0001328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton organization during vegetative growth","synonyms":[{"name":"abnormal microtubule cytoskeleton organisation during vegetative growth","type":"exact"},{"name":"abnormal microtubule cytoskeleton organization during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule organisation during vegetative growth","type":"related"},{"name":"abnormal microtubule organization during vegetative growth","type":"related"},{"name":"disorganized microtubule cytoskeleton during vegetative growth","type":"related"},{"name":"microtubule cytoskeleton defects during vegetative growth","type":"exact"},{"name":"microtubule organization defects during vegetative growth","type":"related"}],"termid":"FYPO:0001350"}


id: PBO:0084608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a protein; YBL103C-A was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YBL104C","termid":"PBO:0084608"}


id: PBO:0113454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterodimeric guanine nucleotide exchange factor (GEF); subunit of Mon1-Ccz1 GEF complex which stimulates nucleotide exchange and activation of Ypt7p, a Rab family GTPase involved in membrane tethering and fusion events at late endosome and vacuole; GEF activity is stimulated by membrane association and anionic phospholipids; role in localizing Ypt7p to vacuolar membrane; required for autophagy, CVT pathway, and mitophagy; targeted to vacuole via AP-3 pathway","termid":"PBO:0113454"}


id: GO:0050590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: desacetoxyvindoline + 2-oxoglutarate + O2 = desacetylvindoline + succinate + CO2.","definition_xrefs":["MetaCyc:1.14.11.20-RXN","EC:1.14.11.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"desacetoxyvindoline 4-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R05857","RHEA:18973"],"synonyms":[{"name":"D17H activity","type":"related"},{"name":"deacetoxyvindoline,2-oxoglutarate:oxygen oxidoreductase (4beta-hydroxylating)","type":"related"},{"name":"desacetoxyvindoline,2-oxoglutarate:oxygen oxidoreductase (4-beta-hydroxylating) activity","type":"related"},{"name":"desacetoxyvindoline,2-oxoglutarate:oxygen oxidoreductase (4beta-hydroxylating)","type":"related"},{"name":"desacetoxyvindoline-4-hydroxylase activity","type":"related"},{"name":"desacetyoxyvindoline-17-hydroxylase activity","type":"related"}],"termid":"GO:0050590"}


id: PBO:0082770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the spindle-assembly checkpoint complex; delays onset of anaphase in cells with defects in mitotic spindle assembly; forms a complex with Mad1p; regulates APC/C activity during prometaphase and metaphase of meiosis I; gene dosage imbalance between MAD1 and MAD2 leads to chromosome instability","termid":"PBO:0082770"}


id: MONDO:0000350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Charcot-Marie-Tooth disease intermediate type (obsolete MONDO:0000350)","termid":"MONDO:0000350","xrefs":{"Monarch":{"xref_id":"0000350"}}}


id: GO:0047571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-oxosteroid + acceptor = a 3-oxo-D1-steroid + reduced acceptor.","definition_xrefs":["EC:1.3.99.4","MetaCyc:3-OXOSTEROID-1-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-CH group of donors","termid":"GO:0033765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-oxosteroid 1-dehydrogenase activity","secondary_identifiers":["RHEA:13329"],"synonyms":[{"name":"1-ene-dehydrogenase activity","type":"related"},{"name":"3-ketosteroid-1-en-dehydrogenase activity","type":"related"},{"name":"3-ketosteroid-delta1-dehydrogenase activity","type":"related"},{"name":"3-oxosteroid delta1-dehydrogenase activity","type":"related"},{"name":"3-oxosteroid:(2,6-dichlorphenolindophenol) delta1-oxidoreductase activity","type":"related"},{"name":"3-oxosteroid:(acceptor) delta1-oxidoreductase activity","type":"related"},{"name":"3-oxosteroid:acceptor delta1-oxidoreductase activity","type":"related"},{"name":"4-en-3-oxosteroid:(acceptor)-1-en-oxido-reductase activity","type":"related"},{"name":"delta1-dehydrogenase activity","type":"related"},{"name":"delta1-steroid reductase activity","type":"related"}],"termid":"GO:0047571"}


id: PBO:0059784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 10","termid":"PBO:0059784"}


id: PBO:0028838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcript_length_by_3'_extension","termid":"PBO:0028838"}


id: GO:0047968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + glyoxylate + NADP+ = H+ + NADPH + oxalyl-CoA.","definition_xrefs":["RHEA:21024","EC:1.2.1.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glyoxylate dehydrogenase (acylating) activity","secondary_identifiers":["KEGG_REACTION:R00468","MetaCyc:GLYOXYLATE-DEHYDROGENASE-ACYLATING-RXN"],"synonyms":[{"name":"glyoxylate:NADP+ oxidoreductase (CoA-oxalylating)","type":"related"}],"termid":"GO:0047968"}


id: GO:0015420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: vitamin B12(out) + ATP + H2O = ADP + an vitamin B12(in) + H+ + phosphate. Vitamin B12 is alkylcob(III)alamin.","definition_xrefs":["GOC:pz","RHEA:17873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin transmembrane transporter activity","termid":"GO:0090482"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ABC-type vitamin B12 transporter activity","secondary_identifiers":["Reactome:R-HSA-5683325","Reactome:R-HSA-5223313","Reactome:R-HSA-9759206","Reactome:R-HSA-3095901","GO:0015235","GO:0102023","EC:7.6.2.8","MetaCyc:3.6.3.33-RXN"],"synonyms":[{"name":"ATP-dependent cobalamin transmembrane transporter activity","type":"related"},{"name":"ATP-dependent vitamin B12 transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled cobalamin transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled vitamin B12 transmembrane transporter activity","type":"related"},{"name":"cobalamin ABC transporter","type":"exact"},{"name":"cobalamin porter activity","type":"broad"},{"name":"cobalamin transporter activity","type":"broad"},{"name":"cobalamin-transporting ATPase activity","type":"related"},{"name":"vitamin B12 ABC transporter activity","type":"exact"},{"name":"vitamin B12 porter activity","type":"broad"},{"name":"vitamin B12 transporter activity","type":"broad"},{"name":"vitamin B12-transporting ATPase activity","type":"broad"}],"termid":"GO:0015420"}


id: MONDO:0958006
data:
  {"annotated_genes":["SJAG_04369"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86415],"is_not":false,"summary":null,"term":"MONDO:0958006"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Guo-Campeau type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1844202","UMLS:C5882737","OMIM:620663"],"termid":"MONDO:0958006","terms_by_termid":{"MONDO:0958006":null},"xrefs":{"Monarch":{"xref_id":"0958006"}}}


id: PBO:0000560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap111 (predicted)","termid":"PBO:0000560"}


id: PBO:0048506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth differentiation factor 6","termid":"PBO:0048506"}


id: PBO:0002702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin Fus1","termid":"PBO:0002702"}


id: MONDO:0003284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the mediastium. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign neoplasm of mediastinum","termid":"MONDO:0021521"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediastinum leiomyoma","secondary_identifiers":["DOID:5123","NCIT:C6598","UMLS:C1334659","MEDGEN:277350"],"synonyms":[{"name":"leiomyoma of mediastinum","type":"exact"},{"name":"leiomyoma of the mediastinum","type":"exact"},{"name":"mediastinal leiomyoma","type":"exact"},{"name":"mediastinum leiomyoma","type":"exact"}],"termid":"MONDO:0003284","xrefs":{"Monarch":{"xref_id":"0003284"}}}


id: MONDO:1010910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular dystrophy that occurs in turkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, turkey","secondary_identifiers":["OMIA:000679-9103"],"termid":"MONDO:1010910","xrefs":{"Monarch":{"xref_id":"1010910"}}}


id: MONDO:1040038
data:
  {"annotated_genes":["SJAG_01897"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014372"}]},"cv_name":"mondo","definition":"Any retinopathy caused by variants in the TTLL5 gene.","definition_xrefs":["PMID:34203883","PMID:27162334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"TTLL5-related retinopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"TTLL5-related retinopathy","type":"exact"}],"termid":"MONDO:1040038","terms_by_termid":{"MONDO:0014372":null},"xrefs":{"Monarch":{"xref_id":"1040038"}}}


id: PBO:0066645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulating synaptic membrane exocytosis 3","termid":"PBO:0066645"}


id: PATO:0001259
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of purple color and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purple","termid":"PATO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark purple","termid":"PATO:0001259"}


id: PBO:0003028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Grt1 (predicted)","termid":"PBO:0003028"}


id: PBO:0062130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 10","termid":"PBO:0062130"}


id: PBO:0031102
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_salt_stress","termid":"PBO:0031102"}


id: GO:0010999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of eIF2 alpha phosphorylation as a result of heme levels.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"regulation of translational initiation by eIF2 alpha phosphorylation","termid":"GO:0010998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of eIF2 alpha phosphorylation by heme","secondary_identifiers":["Reactome:R-HSA-9648895"],"termid":"GO:0010999"}


id: MONDO:0002828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma that arises from the Bartholin gland and is characterized by the presence of malignant urothelial-type epithelial cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bartholin gland carcinoma","termid":"MONDO:0002829"},{"relation_name":"is_a","term_name":"transitional cell carcinoma","termid":"MONDO:0006474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"Bartholin gland transitional cell carcinoma","secondary_identifiers":["NCIT:C40297","MEDGEN:267340","UMLS:C1511053","DOID:3998"],"synonyms":[{"name":"Bartholin gland transitional cell carcinoma","type":"exact"},{"name":"Bartholin's gland transitional cell carcinoma","type":"exact"},{"name":"major vestibular gland transitional cell carcinoma","type":"exact"}],"termid":"MONDO:0002828","xrefs":{"Monarch":{"xref_id":"0002828"}}}


id: PBO:0053872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1148","termid":"PBO:0053872"}


id: FYPO:0002392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein acetylation during vegetative growth","synonyms":[{"name":"abnormal protein acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002392"}


id: GO:0097539
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nine-bladed, propeller-like protein complex that links the distal end of the basal body and the cilium to the plasma membrane. Functions in protein sorting and gating (i.e. active and passive transport of proteins in and out of the cilium).","definition_xrefs":["PMID:22653444","PMID:5335827","GOC:krc","GOC:kmv","PMID:24231678","GOC:cilia","PMID:5064817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ciliary transition fiber","synonyms":[{"name":"centriolar distal appendage","type":"related"},{"name":"cilial transition fiber","type":"exact"},{"name":"cilial transition fibre","type":"exact"},{"name":"ciliary transition fibre","type":"exact"},{"name":"cilium transition fiber","type":"exact"},{"name":"cilium transition fibre","type":"exact"},{"name":"distal appendage of basal body","type":"related"},{"name":"distal appendage of centriole","type":"related"},{"name":"distal appendage of mother centriole","type":"related"},{"name":"transition fiber","type":"broad"},{"name":"transition fibre","type":"broad"}],"termid":"GO:0097539"}


id: PBO:0088874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylpeptide hydrolase","termid":"PBO:0088874"}


id: PBO:0083813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential serine kinase involved in the processing of 20S pre-rRNA; involved in the processing of the 20S pre-rRNA into mature 18S rRNA; has similarity to Rio1p","termid":"PBO:0083813"}


id: PBO:0063689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphogluconate dehydrogenase pseudogene 1","termid":"PBO:0063689"}


id: MONDO:0015786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Prader-Willi syndrome","termid":"MONDO:0008300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"Prader-Willi syndrome due to imprinting mutation","secondary_identifiers":["GARD:17075","MEDGEN:1826086","Orphanet:177910","UMLS:C5680510"],"termid":"MONDO:0015786","xrefs":{"Monarch":{"xref_id":"0015786"}}}


id: PR:O14244
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6F6.13c gene.","definition_xrefs":["UniProtKB:O14244","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C6F6.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.13c","synonyms":[{"name":"Spom972h-SPAC6F6.13c","type":"exact"}],"termid":"PR:O14244"}


id: PBO:0082716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the NuA4 histone acetyltransferase complex; acts as a platform for assembly of NuA4 subunits into the native complex; required for initiation of pre-meiotic DNA replication, likely due to its requirement for expression of IME1","termid":"PBO:0082716"}


id: PBO:0041951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chibby family member 2","termid":"PBO:0041951"}


id: PBO:0055373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2802","termid":"PBO:0055373"}


id: PATO:0002033
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reflective quality that is the light scattering occurring at wide angle (around 90 degrees) to the incident beam.","definition_xrefs":["PATOC:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation reflective quality","termid":"PATO:0001294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"side scatter","termid":"PATO:0002033"}


id: PR:Q12704
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase subunit gamma-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04517","PANTHER:PTHR10267:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.22","secondary_identifiers":["UniProtKB:Q12704"],"synonyms":[{"name":"Spom972h-POLG","type":"exact"},{"name":"mitochondrial DNA polymerase catalytic subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q12704"}


id: GO:0002682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an immune system process.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immune system process","termid":"GO:0002682"}


id: PBO:0063794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 21B","termid":"PBO:0063794"}


id: PBO:0051022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 2","termid":"PBO:0051022"}


id: PBO:0063193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 6","termid":"PBO:0063193"}


id: GO:0030789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + precorrin-3B = S-adenosyl-L-homocysteine + precorrin 4.","definition_xrefs":["EC:2.1.1.131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"precorrin-3B C17-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.131-RXN","RHEA:12761"],"synonyms":[{"name":"CobJ","type":"related"},{"name":"S-adenosyl-L-methionine:precorrin-3B C17-methyltransferase activity","type":"related"},{"name":"precorrin-3 methylase activity","type":"related"},{"name":"precorrin-3 methyltransferase activity","type":"related"}],"termid":"GO:0030789"}


id: PBO:0087961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane protein with a role in cell wall polymer composition; localizes on inner surface of plasma membrane at bud and in daughter cell; SKG1 has a paralog, AIM20, that arose from the whole genome duplication","termid":"PBO:0087961"}


id: PATO:0002133
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A displaced angular placement quality inhering in a body part by virtue of the bearer's movement closer the medial plane of the body.","definition_xrefs":["wikipedia:wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"displaced to","termid":"PATO:0002168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adduction","termid":"PATO:0002133"}


id: FYPO:0007848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubules self-assemble into a spindle without the participation of the spindle pole body (SPB) during one or both meiotic nuclear divisions. This phenotype is observed in the absence of both bouquet formation and meiotic SPB insertion into the nuclear envelope.","definition_xrefs":["PomBase:mah","PMID:34346498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle assembly","termid":"FYPO:0000737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"meiotic spindle self-assembly","synonyms":[{"name":"SPB-independent meiotic spindle assembly","type":"exact"},{"name":"SPB-independent spindle assembly during meiosis","type":"exact"},{"name":"acentrosomal meiotic spindle assembly","type":"related"},{"name":"acentrosomal spindle assembly during meiosis","type":"related"},{"name":"meiotic SPB-independent spindle","type":"related"},{"name":"spindle pole body-independent meiotic spindle assembly","type":"exact"},{"name":"spindle pole body-independent spindle assembly during meiosis","type":"exact"},{"name":"spindle self-assembly during meiosis","type":"exact"},{"name":"spindle self-assembly during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007848"}


id: MONDO:0012315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 10q is a chromosomal anomaly involving terminal deletion of the long arm of chromosome 10 and is characterized by facial dysmorphism, pre- and postnatal growth retardation, cardiac and genital anomalies, and developmental delay.","definition_xrefs":["Orphanet:96148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 10","termid":"MONDO:0016909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal 10q deletion syndrome","secondary_identifiers":["GARD:3711","OMIM:609625","UMLS:C2674937","SCTID:718687003","MEDGEN:436306","DOID:0060390","MESH:C567182"],"synonyms":[{"name":"10q deletion","type":"related"},{"name":"10q monosomy","type":"related"},{"name":"chromosome 10q deletion","type":"related"},{"name":"chromosome 10q26 deletion syndrome","type":"exact"},{"name":"deletion 10q","type":"related"},{"name":"distal deletion 10q","type":"exact"},{"name":"distal monosomy 10q","type":"exact"},{"name":"distal monosomy type 10q","type":"exact"},{"name":"monosomy 10q","type":"related"},{"name":"monosomy 10qter","type":"exact"},{"name":"partial monosomy 10q","type":"related"},{"name":"telomeric deletion 10q","type":"exact"},{"name":"terminal chromosome 10Q26 deletion syndrome","type":"related"},{"name":"terminal chromosome 10q26 deletion syndrome","type":"exact"}],"termid":"MONDO:0012315","xrefs":{"Monarch":{"xref_id":"0012315"}}}


id: MONDO:0002372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A teratoma of the ovary composed exclusively or predominantly of a single type of tissue derived from the ectoderm or endoderm. A representative example is struma ovarii which is a teratoma composed exclusively or predominantly of thyroid tissue.","definition_xrefs":["NCIT:C8113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian monodermal teratoma","termid":"MONDO:0003331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian monodermal and highly specialized teratoma","secondary_identifiers":["MEDGEN:83601","DOID:2641","UMLS:C0280134"],"synonyms":[{"name":"ovarian germ cell monodermal and highly specialised teratoma","type":"exact"},{"name":"ovarian germ cell monodermal and highly specialized teratoma","type":"exact"},{"name":"ovarian monodermal and highly specialized teratoma","type":"exact"}],"termid":"MONDO:0002372","xrefs":{"Monarch":{"xref_id":"0002372"}}}


id: GO:0042104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of activated T cell proliferation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell proliferation","termid":"GO:0042102"},{"relation_name":"is_a","term_name":"regulation of activated T cell proliferation","termid":"GO:0046006"},{"relation_name":"positively_regulates","term_name":"activated T cell proliferation","termid":"GO:0050798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of activated T cell proliferation","synonyms":[{"name":"activation of activated T cell proliferation","type":"narrow"},{"name":"positive regulation of activated T lymphocyte proliferation","type":"exact"},{"name":"positive regulation of activated T-cell proliferation","type":"exact"},{"name":"positive regulation of activated T-lymphocyte proliferation","type":"exact"},{"name":"stimulation of activated T cell proliferation","type":"narrow"},{"name":"up regulation of activated T cell proliferation","type":"exact"},{"name":"up-regulation of activated T cell proliferation","type":"exact"},{"name":"upregulation of activated T cell proliferation","type":"exact"}],"termid":"GO:0042104"}


id: PBO:0035894
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cyclin_B1-CDK1_complex_level","termid":"PBO:0035894"}


id: GO:0052807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aflatoxin + 1,5-dihydrocoenzyme F420 = aflatoxin with reduced furanocoumarin moiety + coenzyme F420. 1,5-dihydrocoenzyme F420 is also known as reduced coenzyme F420.","definition_xrefs":["GOC:mengo_curators","PMID:20807200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aflatoxin reductase (coenzyme F420) activity","synonyms":[{"name":"aflatoxin:coenzyme F420 oxidoreductase activity","type":"exact"},{"name":"aflatoxin:reduced coenzyme F420 reductase activity","type":"exact"},{"name":"coenzyme F420-aflatoxin reductase activity","type":"exact"},{"name":"coenzyme F420-dependent aflatoxin reductase activity","type":"exact"}],"termid":"GO:0052807"}


id: PR:P28745
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A regulator of chromosome condensation that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein pim1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC557.03c","secondary_identifiers":["UniProtKB:P28745"],"synonyms":[{"name":"SPBC557.03c","type":"related"},{"name":"Spom972h-RCC1","type":"exact"},{"name":"dcd1","type":"related"},{"name":"poly(A)+ RNA transport protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ptr2","type":"related"}],"termid":"PR:P28745"}


id: GO:0016979
data:
  {"annotated_genes":["SJAG_01164"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105593],"is_not":false,"summary":null,"term":"GO:0016979"}]},"cv_name":"molecular_function","definition":"Catalysis of the lipoylation of a protein in two steps: ATP + (R)-lipoate + a [lipoyl-carrier protein]-L-lysine = a [lipoyl-carrier protein]-N6-(lipoyl)lysine + AMP + diphosphate (overall reaction): (1) ATP + (R)-lipoate = lipoyl-AMP + diphosphate; (2) lipoyl-AMP + a [lipoyl-carrier protein]-L-lysine = a [lipoyl-carrier protein]-N6-(lipoyl)lysine + AMP.","definition_xrefs":["PMID:17570395","RHEA:49288","PMID:16141198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016779","GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lipoate-protein ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008916","GO:0102315","MetaCyc:RXN-17127","GO:0016978","EC:6.3.1.20"],"synonyms":[{"name":"lipoate-protein ligase A activity","type":"narrow"},{"name":"lipoate-protein ligase B activity","type":"narrow"},{"name":"lipoate-protein ligase activity (lipoylation of glycine cleavage complex)","type":"narrow"}],"termid":"GO:0016979","terms_by_termid":{"GO:0016979":null}}


id: PBO:0047424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc alpha and mu receptor","termid":"PBO:0047424"}


id: MONDO:0023013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Duker-Weiss-Siber syndrome","secondary_identifiers":["MESH:C535719","MEDGEN:419689","UMLS:C2930993"],"synonyms":[{"name":"Duker Weiss Siber syndrome","type":"related"},{"name":"microphthalmos, microencephaly, intellectual disability, agenesis of the corpus callosum, hypospadius, and cryptorchidism","type":"related"},{"name":"microphthalmos, microencephaly, mental retardation, agenesis of the corpus callosum, hypospadius, and cryptorchidism","type":"related"}],"termid":"MONDO:0023013","xrefs":{"Monarch":{"xref_id":"0023013"}}}


id: GO:0033856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-deoxy-D-xylulose 5-phosphate + 3-amino-2-oxopropyl phosphate = 2 H2O + H+ + phosphate + pyridoxine 5'-phosphate.","definition_xrefs":["RHEA:15265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"pyridoxine 5'-phosphate synthase activity","secondary_identifiers":["KEGG_REACTION:R05838","EC:2.6.99.2","MetaCyc:PDXJ-RXN"],"synonyms":[{"name":"1-deoxy-D-xylulose-5-phosphate:3-amino-2-oxopropyl phosphate 3-amino-2-oxopropyltransferase (phosphate-hydrolysing; cyclizing) activity","type":"related"},{"name":"PNP synthase activity","type":"related"},{"name":"pyridoxine 5-phosphate phospho lyase activity","type":"related"}],"termid":"GO:0033856"}


id: MONDO:0018503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma of stomach, salivary gland type","secondary_identifiers":["Orphanet:423781"],"synonyms":[{"name":"gastric carcinoma, salivary gland type","type":"exact"}],"termid":"MONDO:0018503","xrefs":{"Monarch":{"xref_id":"0018503"}}}


id: GO:0006030
data:
  {"annotated_genes":["SJAG_04868","SJAG_00620","SJAG_04728","SJAG_00442","SJAG_02845","SJAG_03723","SJAG_00978"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74628,78676,74802,71424,72336,110420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006031"},{"annotations":[67393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycan metabolic process","termid":"GO:0006022"},{"relation_name":"is_a","term_name":"glucosamine-containing compound metabolic process","termid":"GO:1901071"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00620":null,"SJAG_00978":null,"SJAG_02845":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"beta-1,4-linked N-acetylglucosamine metabolic process","type":"exact"},{"name":"beta-1,4-linked N-acetylglucosamine metabolism","type":"exact"},{"name":"chitin metabolism","type":"exact"}],"termid":"GO:0006030","terms_by_termid":{"GO:0006031":null,"GO:0006032":null}}


id: PBO:0086508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein mannosyltransferase similar to Pmt1p; has a potential role in protein O-glycosylation","termid":"PBO:0086508"}


id: MONDO:1011456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rickets that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rickets, non-human animal","secondary_identifiers":["OMIA:002364"],"termid":"MONDO:1011456","xrefs":{"Monarch":{"xref_id":"1011456"}}}


id: MONDO:0040872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of primary polydipsia not caused by underlying psychiatric symptoms.","definition_xrefs":["Wikipedia:Primary_polydipsia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary polydipsia","termid":"MONDO:0040870"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-psychogenic polydipsia","synonyms":[{"name":"idiopathic polydipsia","type":"narrow"}],"termid":"MONDO:0040872","xrefs":{"Monarch":{"xref_id":"0040872"}}}


id: GO:0001004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Initiating the assembly of the RNA polymerase III pre-initiation complex by binding to a control sequence in the intragenic region. This allows to recruit TFIIIB to the DNA at a site centered approximately 26 base pairs upstream of the start site of transcription. For tRNA genes, TFIIIC first associates with DNA, and then recruits TFIIIB. For 5S rRNA genes, TFIIIA binds to DNA first, followed by TFIIIC, which then recruits TFIIIB.","definition_xrefs":["PMID:12381659","PMID:23063749","GOC:txnOH-2018","PMID:27911719","Wikipedia:RNA_polymerase_III"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III transcription regulator recruiting activity (obsolete GO:0001004)","synonyms":[{"name":"RNA polymerase III assembly factor activity","type":"related"},{"name":"RNA polymerase III assembly factor activity, TFIIIB recruiting","type":"related"},{"name":"RNA polymerase III hybrid type promoter TFIIIB recruiting transcription factor activity","type":"narrow"},{"name":"RNA polymerase III promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity","type":"narrow"},{"name":"RNA polymerase III transcription factor recruiting activity","type":"exact"},{"name":"RNA polymerase III type 1 promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity","type":"narrow"},{"name":"RNA polymerase III type 2 promoter sequence-specific DNA binding TFIIIB recruiting transcription factor activity","type":"narrow"},{"name":"RNA polymerase III type 3 promoter TFIIIB recruiting transcription factor activity","type":"narrow"},{"name":"SNAPc-type activity","type":"related"},{"name":"TFIIIA activity","type":"related"},{"name":"TFIIIC-type activity","type":"related"},{"name":"transcription factor activity, RNA polymerase III promoter sequence-specific binding, TFIIIB recruiting","type":"exact"},{"name":"transcription factor activity, RNA polymerase III type 1 promoter TFIIIB","type":"related"},{"name":"transcription factor activity, RNA polymerase III type 1 promoter sequence-specific binding, TFIIIB recruiting","type":"narrow"},{"name":"transcription factor activity, RNA polymerase III type 2 promoter sequence-specific binding, TFIIIB recruiting","type":"narrow"},{"name":"transcription factor activity, RNA polymerase III type 3 promoter TFIIIB recruiting","type":"narrow"},{"name":"type 2 RNA polymerase III promoter recognition","type":"narrow"},{"name":"type 3 RNA polymerase III promoter recognition","type":"narrow"}],"termid":"GO:0001004"}


id: FYPO:0000251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing galactose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0005447","FYPO:0001985","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on galactose carbon source","synonyms":[{"name":"decreased growth on galactose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on galactose carbon source","type":"exact"},{"name":"growth defects, growth inhibition in galactose-based medium","type":"related"},{"name":"reduced cell growth on galactose carbon source","type":"exact"},{"name":"slow cell growth on galactose carbon source","type":"narrow"}],"termid":"FYPO:0000251"}


id: GO:0047796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclohexane-1,3-dione + H2O = 5-oxohexanoate + H+.","definition_xrefs":["RHEA:16473","EC:3.7.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cyclohexane-1,3-dione hydrolase activity","secondary_identifiers":["MetaCyc:CYCLOHEXANE-13-DIONE-HYDROLASE-RXN","KEGG_REACTION:R03211"],"synonyms":[{"name":"1,3-cyclohexanedione hydrolase activity","type":"related"},{"name":"cyclohexane-1,3-dione acylhydrolase (decyclizing)","type":"related"}],"termid":"GO:0047796"}


id: PBO:0081396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 235","termid":"PBO:0081396"}


id: GO:0019960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C-X3-C chemokine; C-X3-C chemokines have three amino acids between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine binding","termid":"GO:0019956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"C-X3-C chemokine binding","termid":"GO:0019960"}


id: MOD:00288
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively doubly cross-links an L-glutamic acid residue and an L-tyrosine residue with a carbon-carbon bond and a carbon-nitrogen bond to form pyrroloquinoline quinone.","definition_xrefs":["PubMed:1310505","ChEBI:18315","PubMed:7665488","RESID:AA0283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrroloquinoline quinone","synonyms":[{"name":"2,4,6-tricarboxylic-pyrrolo[2,3-5,6]quinoline 8,9-quinone","type":"exact"},{"name":"2,7,9-tricarboxy-1H-pyrrolo(2,3-f)quinoline-4,5-dione","type":"exact"},{"name":"4,5-dihydro-4,5-dioxo-1H-pyrrolo[2,3-5,6]quinoline-2,7,9-tricarboxylic acid","type":"exact"},{"name":"CROSSLNK Pyrroloquinoline quinone (Glu-Tyr)","type":"exact"},{"name":"coenzyme PQQ","type":"exact"},{"name":"methoxatin","type":"exact"},{"name":"pyrroloquinoline quinone","type":"exact"}],"termid":"MOD:00288"}


id: PBO:0045958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal growth factor receptor","termid":"PBO:0045958"}


id: PBO:0017565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic ER membrane protein implicated in cholesterol metabolism (predicted)","termid":"PBO:0017565"}


id: MONDO:0019721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A renal or urinary tract malformation that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital anomaly of kidney and urinary tract","termid":"MONDO:0019719"}],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic renal or urinary tract malformation (obsolete MONDO:0019721)","secondary_identifiers":["Orphanet:93547"],"synonyms":[{"name":"syndrome associated with congenital anomaly of kidney and urinary tract","type":"exact"},{"name":"syndromic congenital anomaly of kidney and urinary tract","type":"exact"},{"name":"syndromic renal or urinary tract malformation","type":"exact"}],"termid":"MONDO:0019721","xrefs":{"Monarch":{"xref_id":"0019721"}}}


id: GO:2000589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric mesenchymal cell migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"metanephric mesenchymal cell migration","termid":"GO:0035789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric mesenchymal cell migration","synonyms":[{"name":"regulation of metanephric mesenchyme chemotaxis","type":"related"}],"termid":"GO:2000589"}


id: PBO:0005000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen54 (predicted)","termid":"PBO:0005000"}


id: FYPO:0003830
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the cytokinesis checkpoint of a mitotic cell cycle is abnormal. The cytokinesis checkpoint normally delays the G2/M transition of a mitotic cell cycle if cytokinesis was not completed correctly in the previous cell cycle. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["GO:0044878","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of G2/M transition of mitotic cell cycle","termid":"FYPO:0000166"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle checkpoint","termid":"FYPO:0001704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"abnormal cytokinesis checkpoint","synonyms":[{"name":"abnormal cytokinesis after mitosis checkpoint","type":"exact"},{"name":"abnormal cytokinesis checkpoint activation","type":"related"},{"name":"abnormal mitotic cell cycle cytokinesis checkpoint","type":"exact"}],"termid":"FYPO:0003830"}


id: PBO:0071424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 30","termid":"PBO:0071424"}


id: GO:0003681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to DNA in a bent conformation.","definition_xrefs":["GOC:jl","PMID:12627977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"bent DNA binding","termid":"GO:0003681"}


id: PBO:0000235
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.1","termid":"PBO:0000235"}


id: MONDO:0015915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebellar malformation (obsolete MONDO:0015915)","secondary_identifiers":["Orphanet:182061"],"termid":"MONDO:0015915","xrefs":{"Monarch":{"xref_id":"0015915"}}}


id: PBO:0076809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere maintenance 2","termid":"PBO:0076809"}


id: PBO:0028448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_substrate_specificity","termid":"PBO:0028448"}


id: PBO:0066104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RasGEF domain family member 1B","termid":"PBO:0066104"}


id: GO:0090704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinate + UDP-D-glucose = O-D-glucosylnicotinate + UDP.","definition_xrefs":["PMID:26116607","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"nicotinate-O-glucosyltransferase activity","termid":"GO:0090704"}


id: MONDO:0100407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly t(11;15)(p15;q35). (A cytogenetic abnormality that refers to the translocation of chromosome 11p15 with chromosome 15q35. It results in the formation of NUP98/JARID1A fusion gene. It is associated with the development of acute myeloid leukemia with t(11;15)(p15;q35); NUP98-JARID1A.)","definition_xrefs":["NCIT:C131505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, t(11;15)(p15;q35)","secondary_identifiers":["NCIT:C131504"],"synonyms":[{"name":"AML, t(11;15)(p15;q35)","type":"exact"}],"termid":"MONDO:0100407","xrefs":{"Monarch":{"xref_id":"0100407"}}}


id: PBO:0048667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrokine 2","termid":"PBO:0048667"}


id: MONDO:0023250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital sucrase-isomaltase deficiency","termid":"MONDO:0009114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"global disaccharide intolerance","secondary_identifiers":["GARD:8386"],"termid":"MONDO:0023250","xrefs":{"Monarch":{"xref_id":"0023250"}}}


id: GO:0106336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the yolk syncytial layer over time, from its initial formation to the mature structure. The yolk syncytial layer is the peripheral layer of the yolk cell including nuclei and non-yolky cytoplasm.","definition_xrefs":["PMID:29180571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"yolk syncytial layer development","synonyms":[{"name":"YSL development","type":"related"}],"termid":"GO:0106336"}


id: PBO:0108710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RabGAP Gyp2","termid":"PBO:0108710"}


id: GO:0051260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"protein homooligomerization","synonyms":[{"name":"protein homooligomer assembly","type":"exact"},{"name":"protein homooligomer biosynthesis","type":"exact"},{"name":"protein homooligomer biosynthetic process","type":"exact"},{"name":"protein homooligomer formation","type":"exact"},{"name":"protein homooligomerization activity","type":"related"}],"termid":"GO:0051260"}


id: GO:1901486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Positive regulation of transcription factor catabolism that results in negative regulation of the SREBP signaling pathway.","definition_xrefs":["PMID:22833559","GOC:vw","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolic process (obsolete GO:1901486)","synonyms":[{"name":"negative regulation of SREBP signaling pathway by positive regulation of SREBP degradation","type":"narrow"},{"name":"negative regulation of SREBP signaling pathway by positive regulation of transcription factor catabolism","type":"exact"},{"name":"negative regulation of SREBP-mediated signaling pathway by positive regulation of transcription factor catabolic process","type":"exact"},{"name":"negative regulation of SREBP-mediated signalling pathway by positive regulation of transcription factor catabolic process","type":"exact"}],"termid":"GO:1901486"}


id: GO:1902423
data:
  {"annotated_genes":["SJAG_04140","SJAG_01805","SJAG_03126","SJAG_00082","SJAG_01837","SJAG_03048","SJAG_04280","SJAG_05290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[112340,116397,105536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[90324,102722,111578,117068,94135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation.","definition_xrefs":["PMID:22065639","GOC:vw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic sister chromatid segregation","termid":"GO:0033047"},{"relation_name":"is_a","term_name":"regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051988"},{"relation_name":"is_a","term_name":"regulation of metaphase plate congression","termid":"GO:0090235"},{"relation_name":"regulates","term_name":"attachment of mitotic spindle microtubules to kinetochore","termid":"GO:0051315"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0000070","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of attachment of mitotic spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of attachment of spindle microtubules to kinetochore during mitosis","type":"related"},{"name":"regulation of attachment of spindle microtubules to kinetochore involved in mitosis","type":"exact"},{"name":"regulation of attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation","type":"exact"},{"name":"regulation of attachment of spindle microtubules to mitotic chromosome","type":"exact"},{"name":"regulation of mitotic attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"regulation of mitotic bipolar attachment","type":"related"}],"termid":"GO:1902423","terms_by_termid":{"GO:0140429":null,"GO:1902424":null,"GO:1902425":null}}


id: PBO:0052325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1549","termid":"PBO:0052325"}


id: PBO:0031356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_drug_(obsolete_FYPO:0000074)","termid":"PBO:0031356"}


id: GO:0051028
data:
  {"annotated_genes":["SJAG_01652","SJAG_01584","SJAG_03693","SJAG_04645","SJAG_01374","SJAG_04310","SJAG_01065","SJAG_04379","SJAG_04115","SJAG_03002","SJAG_04202","SJAG_01449","SJAG_00375","SJAG_04536","SJAG_02534","SJAG_00471","SJAG_00641","SJAG_01185","SJAG_03986","SJAG_01083","SJAG_04360","SJAG_03283","SJAG_01715","SJAG_04721","SJAG_05328","SJAG_00093","SJAG_00298","SJAG_04148","SJAG_03593","SJAG_03847","SJAG_00178","SJAG_01467","SJAG_04472","SJAG_04480","SJAG_03300","SJAG_04017","SJAG_04347","SJAG_04589","SJAG_02704","SJAG_02425","SJAG_00992","SJAG_02209","SJAG_01529","SJAG_04656"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58271,59795,64754],"is_not":false,"summary":null,"term":"GO:0051028"},{"annotations":[61260,80499,73197,74474,117655,101490,73124,62653,77023,89810,77848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[73550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[70208,74311,101736,104284,74581,119328,96867,76056,75072,116189,114844,111498,118421,97278,73997,110229,80749,107996,116701,92523,102991,77655,73545,71795,116442,73383,112126,74847,102204,110799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"}]},"cv_name":"biological_process","definition":"The directed movement of mRNA, messenger ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01467":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02425":null,"SJAG_02534":null,"SJAG_02704":null,"SJAG_03002":null,"SJAG_03283":null,"SJAG_03300":null,"SJAG_03593":null,"SJAG_03693":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04360":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"mRNA transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0051028","terms_by_termid":{"GO:0006406":null,"GO:0016973":null,"GO:0031990":null,"GO:0051028":null}}


id: PBO:0071178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 19","termid":"PBO:0071178"}


id: MONDO:0010199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"White forelock with malformations is a multiple congenital anomalies syndrome characterized by poliosis, distinct facial features (epicanthal folds, hypertelorism, posterior rotation of ears, prominent philtrum, high-arched palate) and congenital anomalies/malformations of the eye (blue sclera), cardiopulmonary (atrial septal defect, prominent thoracic and abdominal veins), and skeletal (clinodactyly, syndactyly of the fingers and 2nd and 3rd toes) systems. There have been no further descriptions in the literature since 1980.","definition_xrefs":["Orphanet:2475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"white forelock with malformations","secondary_identifiers":["OMIM:277740","UMLS:C1848463","GARD:10081","SCTID:763619009","MEDGEN:376362","MESH:C536700"],"synonyms":[{"name":"white forelock with malformations","type":"exact"}],"termid":"MONDO:0010199","xrefs":{"Monarch":{"xref_id":"0010199"}}}


id: MONDO:1010929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myotubular myopathy 1 that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotubular myopathy 1, non-human animal","termid":"MONDO:1010202"},{"relation_name":"is_a","term_name":"congenital myopathy, dog","termid":"MONDO:1010918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubular myopathy 1, dog","secondary_identifiers":["OMIA:001508-9615"],"termid":"MONDO:1010929","xrefs":{"Monarch":{"xref_id":"1010929"}}}


id: GO:1903879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 11beta-hydroxyprogesterone.","definition_xrefs":["GO_REF:0000067","GOC:TermGenie","PMID:10802282","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"11beta-hydroxyprogesterone binding","termid":"GO:1903879"}


id: FYPO:0003017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetative cell is inviable and elongated during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable elongated vegetative cell during cellular response to salt stress (obsolete FYPO:0003017)","synonyms":[{"name":"elongated inviable cell during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell during cellular response to salt stress","type":"exact"},{"name":"inviable elongated vegetative cell during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"lethal; elongated vegetative cell during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003017"}


id: PBO:0031843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endomembrane_system_morphology","termid":"PBO:0031843"}


id: PBO:0076857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tet methylcytosine dioxygenase 3","termid":"PBO:0076857"}


id: MONDO:0021470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the pancreas.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"pancreatic neoplasm","termid":"MONDO:0021040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of pancreas","secondary_identifiers":["ICD10CM:D13.6","MEDGEN:91126","SCTID:92264007","icd11.foundation:1870352651","NCIT:C4612","UMLS:C0347284"],"synonyms":[{"name":"benign neoplasm of the pancreas","type":"exact"},{"name":"benign pancreas neoplasm","type":"exact"},{"name":"benign pancreas tumor","type":"exact"},{"name":"benign pancreas tumour","type":"exact"},{"name":"benign pancreatic neoplasm","type":"exact"},{"name":"benign pancreatic tumor","type":"exact"},{"name":"benign pancreatic tumour","type":"exact"},{"name":"benign tumor of pancreas","type":"exact"},{"name":"benign tumor of the pancreas","type":"exact"},{"name":"benign tumour of pancreas","type":"exact"},{"name":"benign tumour of the pancreas","type":"exact"},{"name":"pancreas benign neoplasm","type":"exact"},{"name":"pancreas neoplasm, benign","type":"exact"},{"name":"pancreas tumor, benign","type":"exact"},{"name":"pancreatic neoplasm, benign","type":"exact"},{"name":"pancreatic tumor, benign","type":"exact"}],"termid":"MONDO:0021470","xrefs":{"Monarch":{"xref_id":"0021470"}}}


id: MONDO:0032591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hyperparathyroidism","termid":"MONDO:0016166"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparathyroidism, transient neonatal","secondary_identifiers":["GARD:16304","UMLS:C1300287","MEDGEN:722059","OMIM:618188"],"synonyms":[{"name":"HRPTTN","type":"exact"},{"name":"hyperparathyroidism, transient neonatal","type":"exact"}],"termid":"MONDO:0032591","xrefs":{"Monarch":{"xref_id":"0032591"}}}


id: GO:0005451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: monoatomic cation(out) + H+(in) = monoatomic cation(in) + H+(out).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monoatomic cation:proton antiporter activity (obsolete GO:0005451)","synonyms":[{"name":"monovalent cation:hydrogen antiporter activity","type":"exact"},{"name":"monovalent cation:proton antiporter activity","type":"related"}],"termid":"GO:0005451"}


id: PBO:0048303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 2","termid":"PBO:0048303"}


id: GO:0031787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a H9 melatonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melatonin receptor binding","termid":"GO:0031784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"H9 melatonin receptor binding","synonyms":[{"name":"H9 melatonin receptor ligand","type":"narrow"}],"termid":"GO:0031787"}


id: MONDO:0021167
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85603,85604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011577"}]},"cv_name":"mondo","definition":"An inflammatory disease involving a pathogenic inflammatory response in the muscle tissue.","definition_xrefs":["MONDO:patterns/inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myositis disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:728.9","MESH:D009220","EFO:0000783","MEDGEN:44564","DOID:633","SCTID:128496001","UMLS:C0027121","NCIT:C27578"],"synonyms":[{"name":"inflammation of muscle tissue","type":"exact"},{"name":"inflammatory disorder of muscle","type":"exact"},{"name":"inflammatory disorder of muscle (disorder)","type":"exact"},{"name":"muscle tissue inflammation","type":"exact"}],"termid":"MONDO:0021167","terms_by_termid":{"MONDO:0011577":null},"xrefs":{"Monarch":{"xref_id":"0021167"}}}


id: FYPO:0006039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic metaphase chromosome recapture does not proceed until the kinetochore has moved all the way to the spindle pole body (SPB), but kinetochores instead pause abnormally near the SPB.","definition_xrefs":["PMID:27146110","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000641","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000337"],"is_obsolete":false,"name":"incomplete mitotic metaphase chromosome recapture","synonyms":[{"name":"incomplete chromosome recapture during mitosis","type":"exact"},{"name":"incomplete chromosome recapture during mitotic metaphase","type":"exact"},{"name":"incomplete kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"incomplete metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"incomplete mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"incomplete mitotic metaphase kinetochore retrieval","type":"exact"},{"name":"incomplete sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0006039"}


id: PBO:0084188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H1, linker histone with roles in meiosis and sporulation; decreasing levels early in sporulation may promote meiosis, and increasing levels during sporulation facilitate compaction of spore chromatin; binds to promoters and within genes in mature spores; may be recruited by Ume6p to promoter regions, contributing to transcriptional repression outside of meiosis; suppresses DNA repair involving homologous recombination","termid":"PBO:0084188"}


id: PBO:0067737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 36","termid":"PBO:0067737"}


id: PBO:0013802
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MET17","termid":"PBO:0013802"}


id: PBO:0034780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex PHD finger and jmjC subunit Lid2","termid":"PBO:0034780"}


id: GO:0000041
data:
  {"annotated_genes":["SJAG_04185","SJAG_01493","SJAG_01007","SJAG_04096","SJAG_00328","SJAG_04246","SJAG_03497","SJAG_02457","SJAG_02399","SJAG_04737","SJAG_02735","SJAG_04830","SJAG_02473","SJAG_04677","SJAG_03079","SJAG_01990","SJAG_01078","SJAG_00547","SJAG_04675","SJAG_03667","SJAG_02968","SJAG_02834","SJAG_00222","SJAG_03231","SJAG_04260","SJAG_04867","SJAG_04743","SJAG_01119","SJAG_03850","SJAG_01803","SJAG_03528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"},{"annotations":[64369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070574"},{"annotations":[108214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060003"},{"annotations":[79003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015677"},{"annotations":[88259,114975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[101825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097430"},{"annotations":[104972,62153,104127],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035434"},{"annotations":[105061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006825"},{"annotations":[104128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033212"},{"annotations":[98409,114175,70606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048250"},{"annotations":[113596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[61574,76170,78250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034755"},{"annotations":[89598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"},{"annotations":[109034,71195,61575,64368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071421"},{"annotations":[80280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098716"},{"annotations":[92779,78012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[62067,62171,69564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"},{"annotations":[62068,62172,69565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[114728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"},{"annotations":[113597,104518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"},{"annotations":[94100,94101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140209"},{"annotations":[104657,75093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"},{"annotations":[78651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071577"}]},"cv_name":"biological_process","definition":"The directed movement of transition metal ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00328":null,"SJAG_00547":null,"SJAG_01007":null,"SJAG_01078":null,"SJAG_01119":null,"SJAG_01493":null,"SJAG_01803":null,"SJAG_01990":null,"SJAG_02399":null,"SJAG_02457":null,"SJAG_02473":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_02968":null,"SJAG_03079":null,"SJAG_03231":null,"SJAG_03497":null,"SJAG_03528":null,"SJAG_03667":null,"SJAG_03850":null,"SJAG_04096":null,"SJAG_04185":null,"SJAG_04246":null,"SJAG_04260":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04737":null,"SJAG_04743":null,"SJAG_04830":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"transition metal ion transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"transition metal transport","type":"exact"}],"termid":"GO:0000041","terms_by_termid":{"GO:0006825":null,"GO:0015677":null,"GO:0033212":null,"GO:0033214":null,"GO:0033215":null,"GO:0034755":null,"GO:0035434":null,"GO:0036249":null,"GO:0044718":null,"GO:0048250":null,"GO:0060003":null,"GO:0070574":null,"GO:0071421":null,"GO:0071577":null,"GO:0071578":null,"GO:0097430":null,"GO:0098705":null,"GO:0098711":null,"GO:0098716":null,"GO:0140147":null,"GO:0140209":null,"GO:0140466":null,"GO:1904257":null}}


id: MONDO:0011911
data:
  {"annotated_genes":["SJAG_02539","SJAG_03153"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87299,87300],"is_not":false,"summary":null,"term":"MONDO:0011911"}]},"cv_name":"mondo","definition":"Craniolenticulosutural dysplasia (CLSD), also known as Boyadjiev-Jabs syndrome, is characterized by the specific association of large and late-closing fontanels, hypertelorism, early-onset cataract and mild generalized skeletal dysplasia.","definition_xrefs":["Orphanet:50814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02539":null,"SJAG_03153":null},"genotype_count":0,"is_obsolete":false,"name":"craniolenticulosutural dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070307","OMIM:607812","icd11.foundation:970423180","GARD:16647","SCTID:725100001","UMLS:C1843042","MEDGEN:334671","MESH:C564332"],"synonyms":[{"name":"Boyadjiev-Jabs syndrome","type":"exact"},{"name":"CLSD","type":"related"},{"name":"cranio-lenticulo-sutural dysplasia, CLSD","type":"exact"},{"name":"craniolenticulosutural dysplasia","type":"exact"}],"termid":"MONDO:0011911","terms_by_termid":{"MONDO:0011911":null},"xrefs":{"Monarch":{"xref_id":"0011911"}}}


id: GO:0047057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phylloquinol + a protein with a disulfide bond = phylloquinone + a protein with reduced L-cysteine residues.","definition_xrefs":["RHEA:57744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor","termid":"GO:0016728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"vitamin-K-epoxide reductase (warfarin-sensitive) activity","secondary_identifiers":["MetaCyc:1.1.4.1-RXN","Reactome:R-HSA-159790","EC:1.17.4.4","Reactome:R-HSA-6806647"],"synonyms":[{"name":"phylloquinone epoxide reductase activity","type":"related"},{"name":"vitamin K1 epoxide reductase activity","type":"narrow"}],"termid":"GO:0047057"}


id: MONDO:0009369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-immune hydrops fetalis (NIHF), a form of HF, is a severe fetal condition defined as the excessive accumulation of fetal fluid within the fetal extravascular compartments and body cavities, and is the end-stage of a wide variety of disorders.","definition_xrefs":["Orphanet:363999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrops fetalis","termid":"MONDO:0015193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-immune hydrops fetalis","secondary_identifiers":["ICD9:778.0","NCIT:C111905","OMIM:236750","UMLS:C0455988","GARD:17580","icd11.foundation:1182287637","MEDGEN:105327","SCTID:276509008"],"synonyms":[{"name":"Haemoglobin H hydrops fetalis syndrome","type":"related"},{"name":"Hemoglobin H hydrops fetalis syndrome","type":"related"},{"name":"NIHF","type":"related"},{"name":"hydrops fetalis, Alpha-thalassemia-related","type":"related"},{"name":"hydrops fetalis, nonimmune","type":"related"},{"name":"non-immune HF","type":"exact"},{"name":"non-immune fetal edema","type":"exact"},{"name":"non-immune fetal hydrops","type":"exact"},{"name":"non-immune foetal hydrops","type":"exact"},{"name":"non-immune foetal oedema","type":"exact"}],"termid":"MONDO:0009369","xrefs":{"Monarch":{"xref_id":"0009369"}}}


id: PBO:0047381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 15","termid":"PBO:0047381"}


id: PBO:0002713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-O-ribose methyltransferase (predicted)","termid":"PBO:0002713"}


id: PR:G2TRP5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.17","synonyms":[{"name":"Spom972h-cox7","type":"exact"}],"termid":"PR:G2TRP5"}


id: PBO:0029500
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_elongated_vegetative_cell","termid":"PBO:0029500"}


id: GO:0010384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cell wall peptidoglycan, a group of glycoproteins that consist of a core-protein backbone O-glycosylated by one or more complex carbohydrates.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan metabolic process","termid":"GO:0006029"},{"relation_name":"is_a","term_name":"cell wall macromolecule metabolic process","termid":"GO:0044036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall proteoglycan metabolic process","synonyms":[{"name":"cell wall proteoglycan metabolism","type":"exact"}],"termid":"GO:0010384"}


id: PBO:0063791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 20","termid":"PBO:0063791"}


id: PBO:0048735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate dehydrogenase 1 pseudogene 6","termid":"PBO:0048735"}


id: GO:1905350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a Y-shaped link. Two distinct protein complexes are known to be involved in proper linker assembly: the MKS complex and the NPHP complex. Improper assembly of Y-shaped links may cause malfunctioning of the transition zone as a molecular gate.","definition_xrefs":["GOC:cilia","PMID:23728985","PMID:24664739","GO_REF:0000079","GOC:TermGenie","PMID:26595381","PMID:4554367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"Y-shaped link assembly","synonyms":[{"name":"Y-link assembly","type":"related"},{"name":"Y-link formation","type":"related"},{"name":"Y-link structure assembly","type":"related"},{"name":"Y-link structure formation","type":"related"},{"name":"Y-shaped assemblage assembly","type":"related"},{"name":"Y-shaped assemblage formation","type":"related"},{"name":"Y-shaped fiber assembly","type":"related"},{"name":"Y-shaped fiber formation","type":"related"},{"name":"Y-shaped fibre assembly","type":"related"},{"name":"Y-shaped fibre formation","type":"related"},{"name":"Y-shaped link formation","type":"exact"},{"name":"Y-shaped linker assembly","type":"related"},{"name":"Y-shaped linker formation","type":"related"},{"name":"membrane-microtubule complex assembly","type":"related"},{"name":"membrane-microtubule complex formation","type":"related"}],"termid":"GO:1905350"}


id: GO:0044017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 27) = CoA + histone H3 N6-acetyl-L-lysine (position 27).","definition_xrefs":["PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0034212","GO:0016740","GO:0016746","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"histone H3K27 acetyltransferase activity","synonyms":[{"name":"histone H3-K27 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K27 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K27 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0044017"}


id: PBO:0063487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase kinase 4","termid":"PBO:0063487"}


id: GO:0042864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the siderochrome pyochelin (2-(2-o-hydroxyphenyl-2-thiazolin-4-yl)-3-methylthiazolidine-4-carboxylic acid).","definition_xrefs":["GOC:jl","PMID:6794030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"},{"relation_name":"is_a","term_name":"pyochelin metabolic process","termid":"GO:0042863"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyochelin biosynthetic process","secondary_identifiers":["GO:0031188","GO:0031187"],"synonyms":[{"name":"pyochelin anabolism","type":"exact"},{"name":"pyochelin biosynthesis","type":"exact"},{"name":"pyochelin biosynthetic process, peptide formation","type":"narrow"},{"name":"pyochelin biosynthetic process, peptide modification","type":"narrow"},{"name":"pyochelin formation","type":"exact"},{"name":"pyochelin synthesis","type":"exact"}],"termid":"GO:0042864"}


id: PBO:0038793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine deaminase like","termid":"PBO:0038793"}


id: PBHQ:003
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_has_qualifier_range","direct_ancestors":[{"relation_name":"is_a","term_name":"has_qualifier_range","termid":"PBHQ:001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colocalizes_with","termid":"PBHQ:003"}


id: PBO:0036243
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli PyrB","termid":"PBO:0036243"}


id: MONDO:0009111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dihydropyrimidinase (DPD) deficiency is a very rare pyrimidine metabolism disorder with a variable clinical presentation including gastrointestinal manifestations (feeding problems, cyclic vomiting, gastroesophageal reflux, malabsorption with villous atrophy), hypotonia, intellectual deficit, seizures, and less frequently growth retardation, failure to thrive, microcephaly and autism. Asymptomatic cases are also reported. DPD deficiency increases the risk of 5-FU toxicity.","definition_xrefs":["Orphanet:38874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of pyrimidine metabolism","termid":"MONDO:0019238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"dihydropyrimidinuria","secondary_identifiers":["DOID:0111629","OMIM:222748","SCTID:238014002","MEDGEN:83353","GARD:12347","UMLS:C0342803","ICD9:277.2"],"synonyms":[{"name":"DPYSD","type":"related"},{"name":"Dph deficiency","type":"related"},{"name":"Dpys deficiency","type":"related"},{"name":"dihydropyrimidinase deficiency","type":"exact"},{"name":"dihydropyrimidinuria","type":"exact"}],"termid":"MONDO:0009111","xrefs":{"Monarch":{"xref_id":"0009111"}}}


id: PBO:0053207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin 7","termid":"PBO:0053207"}


id: PBO:0112876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, with CRAL-TRIO domain Rga10","termid":"PBO:0112876"}


id: MONDO:0032885
data:
  {"annotated_genes":["SJAG_03423","SJAG_01608"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87133,87134],"is_not":false,"summary":null,"term":"MONDO:0032885"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01608":null,"SJAG_03423":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Isidor-Toutain type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684771","OMIM:618728","UMLS:C5231478"],"synonyms":[{"name":"SEMDIST","type":"related"},{"name":"SPONDYLOEPIMETAPHYSEAL DYSPLASIA, ISIDOR-TOUTAIN TYPE","type":"related"}],"termid":"MONDO:0032885","terms_by_termid":{"MONDO:0032885":null},"xrefs":{"Monarch":{"xref_id":"0032885"}}}


id: PBO:0028317
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_LTR-derived_RNA_level","termid":"PBO:0028317"}


id: GO:0045015
data:
  {"annotated_genes":["SJAG_02418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114014],"is_not":false,"summary":null,"term":"GO:0045015"}]},"cv_name":"molecular_function","definition":"Binding to a HDEL sequence, the C terminus tetrapeptide sequence His-Asp-Glu-Leu found in proteins that are to be retained in the endoplasmic reticulum.","definition_xrefs":["PMID:1327759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER retention sequence binding","termid":"GO:0046923"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0003674","GO:0005048","GO:0005488"],"is_obsolete":false,"name":"HDEL sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"HDEL receptor activity","type":"narrow"}],"termid":"GO:0045015","terms_by_termid":{"GO:0045015":null}}


id: PBO:0002016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nsp1","termid":"PBO:0002016"}


id: FYPO:0005113
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquitin-specific protease activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased peptidase activity","termid":"FYPO:0000667"},{"relation_name":"is_a","term_name":"abnormal ubiquitin-specific protease activity","termid":"FYPO:0005111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"increased ubiquitin-specific protease activity","termid":"FYPO:0005113"}


id: GO:0160153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(27/28) in mitochondrial tRNA = pseudouridine(27/28) in mitochondrial tRNA.","definition_xrefs":["EC:5.4.99.44"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0016853","GO:0140101","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mitochondrial tRNA pseudouridine(27/28) synthase activity","secondary_identifiers":["RHEA:42560"],"termid":"GO:0160153"}


id: PBO:0069204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 458, pseudogene","termid":"PBO:0069204"}


id: PBO:0090575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5","termid":"PBO:0090575"}


id: MONDO:0003500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the bile duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct carcinoma","termid":"MONDO:0005496"},{"relation_name":"is_a","term_name":"squamous cell carcinoma of liver and intrahepatic biliary tract","termid":"MONDO:0018534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"squamous cell bile duct carcinoma","secondary_identifiers":["UMLS:C0861861","DOID:5537","NCIT:C5777","MEDGEN:209017"],"synonyms":[{"name":"bile duct squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0003500","xrefs":{"Monarch":{"xref_id":"0003500"}}}


id: SO:0001455
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A relatively rare amino acid encoded by the codon UGA in some contexts, whereas UGA is a termination codon in other contexts.","definition_xrefs":["PMID:23275319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenocysteine","synonyms":[{"name":"Sec","type":"exact"},{"name":"U","type":"exact"}],"termid":"SO:0001455"}


id: PBO:0042370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD180 molecule","termid":"PBO:0042370"}


id: null:local:null
data:
  {"annotation_feature_type":"gene","cv_name":"null","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"null","termid":"null:local:null"}


id: MONDO:0958258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ACTH-independent Cushing syndrome","termid":"MONDO:0020529"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cushing syndrome due to cortisol-producing adrenocortical adenoma","secondary_identifiers":["Orphanet:642788","UMLS:C5816799","MEDGEN:1853161"],"termid":"MONDO:0958258","xrefs":{"Monarch":{"xref_id":"0958258"}}}


id: SO:0001696
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that has been implicated in binding although the exact coordinates of binding may be unknown.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"experimentally_defined_binding_region","synonyms":[{"name":"experimentally defined binding region","type":"related"}],"termid":"SO:0001696"}


id: PR:O74329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02488","PANTHER:PTHR12010:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.09","secondary_identifiers":["UniProtKB:O74329"],"synonyms":[{"name":"Spom972h-RPS29","type":"exact"}],"termid":"PR:O74329"}


id: PBO:0052235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 9 pseudogene 3","termid":"PBO:0052235"}


id: _global:regulates_o_results_in_specification_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"A relation that applies between a process that regulates the specification of some cell type or structure and the specified cell type or structure.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_specification_of","secondary_identifiers":["GOREL:0001027"],"synonyms":[{"name":"regulates_o_results_in_specification_of","type":"exact"}],"termid":"_global:regulates_o_results_in_specification_of"}


id: PBO:0046364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTPD1 antisense RNA 1","termid":"PBO:0046364"}


id: PBO:0070409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A2 pseudogene 3","termid":"PBO:0070409"}


id: GO:1903055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of extracellular matrix organization.","definition_xrefs":["GO_REF:0000058","GOC:rl","GOC:TermGenie","GOC:BHF","PMID:22357537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"positively_regulates","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of extracellular matrix organization","synonyms":[{"name":"activation of extracellular matrix organisation","type":"narrow"},{"name":"activation of extracellular matrix organization","type":"narrow"},{"name":"activation of extracellular matrix organization and biogenesis","type":"related"},{"name":"positive regulation of extracellular matrix organisation","type":"exact"},{"name":"positive regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"up regulation of extracellular matrix organisation","type":"exact"},{"name":"up regulation of extracellular matrix organization","type":"exact"},{"name":"up regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"up-regulation of extracellular matrix organisation","type":"exact"},{"name":"up-regulation of extracellular matrix organization","type":"exact"},{"name":"up-regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"upregulation of extracellular matrix organisation","type":"exact"},{"name":"upregulation of extracellular matrix organization","type":"exact"},{"name":"upregulation of extracellular matrix organization and biogenesis","type":"related"}],"termid":"GO:1903055"}


id: PBO:0088224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family fusion GTPase (mitofusin) Fzo1","termid":"PBO:0088224"}


id: PBO:0060333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYO3B antisense RNA 1","termid":"PBO:0060333"}


id: PBO:0072849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor APC domain containing 2 pseudogene 4","termid":"PBO:0072849"}


id: GO:0110144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a magnetosome, a membrane-bound organelle that envelops particles of magnetic iron minerals in magnetotactic bacteria.","definition_xrefs":["GOC:aa","PMID:27620945"],"gene_count":0,"genotype_count":0,"name":"obsolete magnetosome part (obsolete GO:0110144)","termid":"GO:0110144"}


id: GO:0070915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the phospholipid derivative lysophosphatidic acid, and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["GOC:mah","PMID:15755723","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bioactive lipid receptor activity","termid":"GO:0045125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"lysophosphatidic acid receptor activity","synonyms":[{"name":"LPA receptor activity","type":"exact"}],"termid":"GO:0070915"}


id: GO:0043758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acetate + CoA = ADP + phosphate + acetyl-CoA.","definition_xrefs":["RHEA:15081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetate-CoA ligase (ADP-forming) activity","secondary_identifiers":["GO:0043762","MetaCyc:ACETATE--COA-LIGASE-ADP-FORMING-RXN","EC:6.2.1.13"],"synonyms":[{"name":"acetate thiokinase activity","type":"broad"},{"name":"acetate--CoA ligase (ADP-forming) activity","type":"exact"},{"name":"acetate:CoA ligase (ADP-forming)","type":"related"},{"name":"acetyl coenzyme A synthetase (adenosine diphosphate-forming)","type":"exact"},{"name":"acetyl-CoA synthetase (ADP-forming) activity","type":"related"},{"name":"aryl-CoA synthetase (ADP-forming) activity","type":"related"}],"termid":"GO:0043758"}


id: GO:0071840
data:
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id: FYPO:0003840
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to carbendazim (mecarzole; MBC). Cells stop growing (and may die) at a concentration of carbendazim that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to carbendazim","synonyms":[{"name":"hypersensitive to carbendazim","type":"exact"},{"name":"sensitive to MBC","type":"exact"},{"name":"sensitive to carbendazim during mitotic cell cycle","type":"related"},{"name":"sensitive to carbendazim during vegetative growth","type":"exact"},{"name":"sensitive to mecarzole","type":"exact"},{"name":"sensitive to methyl benzimidazole-2-yl-carbamate","type":"exact"},{"name":"sensitive to methylbenzylcarbamylate","type":"exact"}],"termid":"FYPO:0003840"}


id: MONDO:0005661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Babesiosis refers to a condition caused by microscopic parasites that infect the red blood cells. Many people who are infected with Babesia parasites do not experience any symptoms of the condition. When present, signs and symptoms may include flu-like symptoms such as fever, chills, headache, body aches, nausea and fatigue. In severe cases, babesiosis can be associated with hemolytic anemia. Babesia parasites are primarily spread by infected ticks. Treatment is generally only required in people who develop symptoms of the condition. When necessary, affected people are often prescribed a combination of antimicrobial medications along with supportive care to manage symptoms.","direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"babesiosis","secondary_identifiers":["ICD10CM:B60.0","EFO:0007162","MESH:D001404","MedDRA:10003965","UMLS:C0004576","icd11.foundation:1947003329","DOID:9643","GARD:5878","MEDGEN:2523","ICD9:088.82","Orphanet:108","NCIT:C84581","SCTID:21061004"],"synonyms":[{"name":"Babesia caused disease or disorder","type":"exact"},{"name":"Babesia disease or disorder","type":"exact"},{"name":"Babesia infectious disease","type":"exact"},{"name":"Babesia parasite infection","type":"related"},{"name":"Human babesiosis","type":"related"},{"name":"babesiasis","type":"exact"},{"name":"infection by Babesia","type":"exact"},{"name":"piroplasmosis","type":"exact"}],"termid":"MONDO:0005661","xrefs":{"Monarch":{"xref_id":"0005661"}}}


id: PR:A6X994
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC188.05 gene.","definition_xrefs":["UniProtKB:A6X994","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C188.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.05","synonyms":[{"name":"Spom972h-SPCC188.05","type":"exact"}],"termid":"PR:A6X994"}


id: PBO:0046259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embigin","termid":"PBO:0046259"}


id: MONDO:0045017
data:
  {"annotated_genes":["SJAG_03024","SJAG_00717","SJAG_03509"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86949,86950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011816"},{"annotations":[87548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of cholesterol biosynthetic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol biosynthesis disorder","termid":"MONDO:0019240"},{"relation_name":"is_a","term_name":"cholesterol metabolism disease","termid":"MONDO:0045008"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_03024":null,"SJAG_03509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"cholesterol biosynthetic process disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0342829","SCTID:238036004","MEDGEN:575241"],"synonyms":[{"name":"cholesterol synthesis disease","type":"exact"},{"name":"disorder of cholesterol biosynthetic process","type":"exact"},{"name":"disorder of cholesterol synthesis","type":"exact"}],"termid":"MONDO:0045017","terms_by_termid":{"MONDO:0010035":null,"MONDO:0011816":null},"xrefs":{"Monarch":{"xref_id":"0045017"}}}


id: GO:0102925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-D-galactose + solanidine = H+ + gamma-solanine + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete solanine UDP-galactose galactosyltransferase activity (obsolete GO:0102925)","termid":"GO:0102925"}


id: GO:0047155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-hydroxymethylceph-3-em-4-carboxylate + carbamoyl-phosphate = phosphate + a 3-carbamoyloxymethylcephem.","definition_xrefs":["EC:2.1.3.7","MetaCyc:2.1.3.7-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"3-hydroxymethylcephem carbamoyltransferase activity","secondary_identifiers":["GO:0045447"],"synonyms":[{"name":"3'-hydroxymethylcephem-O-carbamoyltransferase activity","type":"exact"},{"name":"carbamoyl-phosphate:3-hydroxymethylceph-3-em-4-carboxylate carbamoyltransferase activity","type":"related"}],"termid":"GO:0047155"}


id: GO:0045498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sex comb over time, from its formation to the mature structure. The sex combs are the male specific chaetae located on the prothoracic tarsal segment of the prothoracic leg.","direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex comb development","termid":"GO:0045498"}


id: PBO:0045699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 4","termid":"PBO:0045699"}


id: PBO:0047097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 149 member B1 pseudogene 1","termid":"PBO:0047097"}


id: GO:0061360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the progression of the optic chiasm from its initial formation to the mature structure. The process begins when the pathfinding of the axons of the developing optic nerve cause some axons to cross at the midline of the brain and ends when the axons are mature.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"optic nerve development","termid":"GO:0021554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic chiasma development","synonyms":[{"name":"optic chiasm development","type":"exact"}],"termid":"GO:0061360"}


id: GO:2001279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of unsaturated fatty acid biosynthetic process.","definition_xrefs":["GO:0006636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"regulates","term_name":"unsaturated fatty acid biosynthetic process","termid":"GO:0006636"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"regulation of unsaturated fatty acid biosynthetic process","synonyms":[{"name":"regulation of fatty acid desaturation","type":"related"},{"name":"regulation of polyunsaturated fatty acid biosynthesis","type":"related"},{"name":"regulation of unsaturated fatty acid anabolism","type":"exact"},{"name":"regulation of unsaturated fatty acid biosynthesis","type":"exact"},{"name":"regulation of unsaturated fatty acid formation","type":"exact"},{"name":"regulation of unsaturated fatty acid synthesis","type":"exact"}],"termid":"GO:2001279"}


id: GO:0044620
data:
  {"annotated_genes":["SJAG_01238"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000036"}]},"cv_name":"molecular_function","definition":"Binding to the attachment site of the phosphopantetheine prosthetic group of an acyl carrier protein (ACP).","definition_xrefs":["GOC:vw","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prosthetic group binding","termid":"GO:0051192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ACP phosphopantetheine attachment site binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0044620","terms_by_termid":{"GO:0000036":null}}


id: PBO:0057579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 876","termid":"PBO:0057579"}


id: PBO:0029452
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_cell_cycle_arrest,_elongated_cell","termid":"PBO:0029452"}


id: PBO:0027861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_mitotic_S_phase","termid":"PBO:0027861"}


id: GO:0032080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the rate of type I restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of type I site-specific deoxyribonuclease activity (obsolete GO:0032080)","synonyms":[{"name":"down regulation of type I restriction endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of type I restriction endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of type I restriction endodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of type I restriction endodeoxyribonuclease activity","type":"narrow"},{"name":"negative regulation of type I restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type I restriction endodeoxyribonuclease inhibitor","type":"related"},{"name":"type I restriction enzyme inhibitor","type":"related"}],"termid":"GO:0032080"}


id: MONDO:0003923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papilloma that arises from the ciliated respiratory mucosa that lines the ethmoid sinus. It is classified as inverted papilloma and oncocytic papilloma.","definition_xrefs":["NCIT:C6836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus Schneiderian papilloma","termid":"MONDO:0006353"},{"relation_name":"is_a","term_name":"benign neoplasm of ethmoidal sinus","termid":"MONDO:0021515"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethmoid sinus Schneiderian papilloma","secondary_identifiers":["UMLS:C1333476","DOID:6559","MEDGEN:232474"],"synonyms":[{"name":"Schneiderian papilloma of ethmoid sinus","type":"related"},{"name":"Schneiderian papilloma of the ethmoid sinus","type":"exact"},{"name":"ethmoid sinus Schneiderian papilloma","type":"exact"}],"termid":"MONDO:0003923","xrefs":{"Monarch":{"xref_id":"0003923"}}}


id: PR:O74832
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pet127 gene.","definition_xrefs":["UniProtKB:O74832","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA degradation protein pet127, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.04c","synonyms":[{"name":"Spom972h-pet127","type":"exact"}],"termid":"PR:O74832"}


id: GO:0070889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a platelet alpha granule. A platelet alpha granule is a secretory organelle found in blood platelets.","definition_xrefs":["GOC:rph","PMID:16123220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet alpha granule organization","synonyms":[{"name":"platelet alpha granule organisation","type":"exact"},{"name":"platelet alpha granule organization and biogenesis","type":"related"},{"name":"platelet alpha-granule organization","type":"exact"}],"termid":"GO:0070889"}


id: PBO:0073364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family H member 1","termid":"PBO:0073364"}


id: PBO:0083094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage checkpoint protein; part of a PCNA-like complex required for DNA damage response, required for pachytene checkpoint to inhibit cell cycle in response to unrepaired recombination intermediates; potential Cdc28p substrate; forms nuclear foci upon DNA replication stress","termid":"PBO:0083094"}


id: MONDO:0006564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory skin condition caused by direct contact between the skin and an irritating substance. It is typically manifested by erythema, mild edema, and scaling at the affected site.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contact dermatitis","termid":"MONDO:0005480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"irritant dermatitis","secondary_identifiers":["UMLS:C0162823","EFO:1000718","NCIT:C27151","MEDGEN:56513","MESH:D017453","DOID:2772","ICD9:692.9","SCTID:110979008"],"synonyms":[{"name":"irritant contact dermatitis","type":"exact"},{"name":"primary irritant dermatitis","type":"exact"}],"termid":"MONDO:0006564","xrefs":{"Monarch":{"xref_id":"0006564"}}}


id: GO:0007225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The posttranslational modification of members of the Hedgehog family of signaling proteins in order for Hedgehog to exert its biological activity. These modifications include cleavage of its signal sequence, autocatalytic protein cleavage and the attachment of sterol groups.","definition_xrefs":["PMID:15057936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone processing","termid":"GO:0016486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"patched ligand maturation","synonyms":[{"name":"Hedgehog protein processing","type":"narrow"},{"name":"hh protein processing","type":"exact"},{"name":"patched ligand processing","type":"related"}],"termid":"GO:0007225"}


id: PBO:0062259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 15 pseudogene","termid":"PBO:0062259"}


id: GO:0051492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of a stress fiber, a bundle of microfilaments and other proteins found in fibroblasts.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament bundle assembly","termid":"GO:0032231"},{"relation_name":"is_a","term_name":"regulation of actomyosin structure organization","termid":"GO:0110020"},{"relation_name":"regulates","term_name":"stress fiber assembly","termid":"GO:0043149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"regulation of stress fiber assembly","synonyms":[{"name":"regulation of stress fibre biosynthesis","type":"related"},{"name":"regulation of stress fibre formation","type":"exact"}],"termid":"GO:0051492"}


id: GO:0070810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Hulle cell development, a process that leads to the formation of Hulle cells. Hulle cells are specialized multinucleate cells that originate from a nest-like aggregation of hyphae during sexual development and serve as nurse cells to the developing cleistothecium, or fruiting body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"regulation of Hulle cell development","termid":"GO:0070808"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"Hulle cell development","termid":"GO:0070792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Hulle cell development","termid":"GO:0070810"}


id: FYPO:0004924
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere tethering at the nuclear periphery is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"},{"relation_name":"is_a","term_name":"chromosome region localization phenotype during vegetative growth","termid":"FYPO:0008381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal telomere tethering at nuclear periphery during vegetative growth","synonyms":[{"name":"normal mitotic telomere tethering at nuclear periphery during vegetative growth","type":"exact"},{"name":"normal telomere anchoring at nuclear periphery","type":"exact"},{"name":"normal telomere tethering at nuclear periphery during mitotic cell cycle","type":"related"},{"name":"normal telomere tethering to NE during vegetative growth","type":"exact"}],"termid":"FYPO:0004924"}


id: PATO:0000824
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000824 water taste (obsolete PATO:0000824)","termid":"PATO:0000824"}


id: MONDO:0014632
data:
  {"annotated_genes":["SJAG_00120"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85572],"is_not":false,"summary":null,"term":"MONDO:0014632"}]},"cv_name":"mondo","definition":"Any leukodystrophy in which the cause of the disease is a mutation in the PYCR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelinating leukodystrophy 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225332","DOID:0060788","MEDGEN:904191","OMIM:616420"],"synonyms":[{"name":"HLD10","type":"exact"},{"name":"PYCR2 leukodystrophy","type":"exact"},{"name":"hypomyelinating leukodystrophy type 10","type":"exact"},{"name":"leukodystrophy caused by mutation in PYCR2","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 10","type":"related"},{"name":"leukodystrophy, hypomyelinating, type 10","type":"exact"}],"termid":"MONDO:0014632","terms_by_termid":{"MONDO:0014632":null},"xrefs":{"Monarch":{"xref_id":"0014632"}}}


id: MONDO:0013606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Hermansky-Pudlak syndrome in which the cause of the disease is a mutation in the BLOC1S6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015541"},{"relation_name":"is_a","term_name":"Hermansky-Pudlak syndrome","termid":"MONDO:0019312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093","MONDO:0005066","MONDO:0005570"],"is_obsolete":false,"name":"Hermansky-Pudlak syndrome 9","secondary_identifiers":["Orphanet:280663","UMLS:C3280026","ICD10CM:E70.3","GARD:18338","MEDGEN:481656","DOID:0060547","OMIM:614171"],"synonyms":[{"name":"BLOC1S6 Hermansky-Pudlak syndrome","type":"exact"},{"name":"HPS9","type":"exact"},{"name":"Hermansky-Pudlak syndrome 9","type":"exact"},{"name":"Hermansky-Pudlak syndrome caused by mutation in BLOC1S6","type":"exact"},{"name":"Hermansky-Pudlak syndrome type 9","type":"exact"}],"termid":"MONDO:0013606","xrefs":{"Monarch":{"xref_id":"0013606"}}}


id: MONDO:0971130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm of choroid","termid":"MONDO:0021487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"choroidal osteoma","secondary_identifiers":["MEDGEN:1853292","UMLS:C5400362","Orphanet:674965"],"termid":"MONDO:0971130","xrefs":{"Monarch":{"xref_id":"0971130"}}}


id: PBO:0051256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-26-1 (pseudogene)","termid":"PBO:0051256"}


id: PBO:0085058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonessential serine/threonine protein kinase; possible role in DNA damage response; influences tolerance to high levels of ethanol","termid":"PBO:0085058"}


id: MONDO:1010609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Exocrine pancreatic insufficiency that occurs in tiger.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocrine pancreatic insufficiency, non-human animal","termid":"MONDO:1010058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocrine pancreatic insufficiency, tiger","secondary_identifiers":["OMIA:000765-9694"],"termid":"MONDO:1010609","xrefs":{"Monarch":{"xref_id":"1010609"}}}


id: PBO:0063968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 2","termid":"PBO:0063968"}


id: GO:1903258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which sorbose is transported from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:2878925","GO_REF:0000075","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose import across plasma membrane","termid":"GO:0140271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"sorbose import across plasma membrane","synonyms":[{"name":"sorbose import into cell","type":"exact"}],"termid":"GO:1903258"}


id: MONDO:0009599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metaphyseal dysostosis-intellectual disability-conductive deafness syndrome is characterized by metaphyseal dysplasia, short-limb dwarfism, mild intellectual deficit and conductive hearing loss, associated with repeated episodes of otitis media in childhood. It has been described in three brothers born to consanguineous Sicilian parents. Variable manifestations included hyperopia and strabismus. The mode of inheritance is autosomal recessive.","definition_xrefs":["Orphanet:2502"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal dysostosis-intellectual disability-conductive deafness syndrome","secondary_identifiers":["MEDGEN:344437","MESH:C565396","OMIM:250420","GARD:3566","UMLS:C1855175"],"synonyms":[{"name":"metaphyseal dysostosis intellectual disability conductive deafness","type":"related"},{"name":"metaphyseal dysostosis mental retardation conductive deafness","type":"related"},{"name":"metaphyseal dysostosis, conductive hearing loss and intellectual disability","type":"related"},{"name":"metaphyseal dysostosis, conductive hearing loss and mental retardation","type":"related"},{"name":"metaphyseal dysostosis, intellectual disability, and conductive deafness","type":"related"},{"name":"metaphyseal dysostosis, mental retardation, and conductive deafness","type":"related"}],"termid":"MONDO:0009599","xrefs":{"Monarch":{"xref_id":"0009599"}}}


id: PBO:0071579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 8","termid":"PBO:0071579"}


id: PBO:0060423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAALADL2 antisense RNA 2","termid":"PBO:0060423"}


id: GO:0010201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of a continuous far red light stimulus by the high-irradiance response system. Far red light is electromagnetic radiation of wavelength 700-800nm. The activity of the high-irradiance response system is characterized by stronger effects of continuous than pulsed light at equal total fluence.","definition_xrefs":["GOC:sm","GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to far red light","termid":"GO:0010218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to continuous far red light stimulus by the high-irradiance response system","termid":"GO:0010201"}


id: GO:0014803
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the longitudinal sarcoplasmic reticulum envelope. The longitudinal sarcoplasmic reticulum lumen is continuous with the lumen contained within the terminal cisternae.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum lumen","termid":"GO:0033018"},{"relation_name":"part_of","term_name":"longitudinal sarcoplasmic reticulum","termid":"GO:0014801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"longitudinal sarcoplasmic reticulum lumen","termid":"GO:0014803"}


id: PBO:0030074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_asparagine_import","termid":"PBO:0030074"}


id: FYPO:0000810
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01374:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01374","name":"nup132delta","uniquename":"SJAG_01374:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119871,119557,119559,119552],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003779"},{"annotations":[119963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000815"},{"annotations":[119513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003973"},{"annotations":[119967,119694,119872,119968,119974,119975,119687,119686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007772"},{"annotations":[119704,119705,119708,119712,119717,119720],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001556"},{"annotations":[119957],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleus organization is abnormal. 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S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1cat(D422E,D424E aa)","display_uniquename":"ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-2","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"nup132delta":{"display_name":"nup132delta","display_uniquename":"nup132delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01374:allele-1","expression":"Null"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nucleus organization","references_by_uniquename":{"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:33495454":null},"single_locus_annotated_genes":["SJAG_04464","SJAG_03449","SJAG_01242","SJAG_03891","SJAG_01374","SJAG_01745","SJAG_03892","SJAG_02763","SJAG_03940","SJAG_05207","SJAG_04284","SJAG_01906"],"single_locus_genotype_uniquenames":["man1delta","nem2delta","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","vps4delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","lem2delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nup132delta","nup61delta","vps32delta","nem1delta","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","alx1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","cmp7delta","ned1delta"],"synonyms":[{"name":"abnormal nuclear organization","type":"exact"},{"name":"abnormal nucleus organisation","type":"exact"},{"name":"abnormal nucleus organization during mitotic cell cycle","type":"related"},{"name":"abnormal nucleus organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000810","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000815":null,"FYPO:0001556":null,"FYPO:0003779":null,"FYPO:0003973":null,"FYPO:0003976":null,"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0034171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 11 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 11 signaling pathway","termid":"GO:0034170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of toll-like receptor 11 signaling pathway","synonyms":[{"name":"regulation of TLR11 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 11 signalling pathway","type":"exact"}],"termid":"GO:0034171"}


id: PBO:0062427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 87 pseudogene","termid":"PBO:0062427"}


id: PBO:0002669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-1-pyrroline-5-carboxylate reductase (predicted)","termid":"PBO:0002669"}


id: PBO:0042589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 2","termid":"PBO:0042589"}


id: PBO:0054675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2082","termid":"PBO:0054675"}


id: MONDO:1011909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder, non-human animal","termid":"MONDO:1011365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal disease, non-human animal","secondary_identifiers":["OMIA:000856"],"termid":"MONDO:1011909","xrefs":{"Monarch":{"xref_id":"1011909"}}}


id: GO:0070977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for bone to attain its fully functional state.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ maturation","termid":"GO:0048799"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone maturation","termid":"GO:0070977"}


id: GO:0042053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving dopamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine metabolic process","termid":"GO:0042069"},{"relation_name":"regulates","term_name":"dopamine metabolic process","termid":"GO:0042417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dopamine metabolic process","synonyms":[{"name":"regulation of dopamine metabolism","type":"exact"}],"termid":"GO:0042053"}


id: PBO:0086291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in endocytosis and vacuole integrity; peripheral membrane protein; interacts with and negatively regulates Arl1p; localizes to the endosome; member of the Sec7p family of proteins","termid":"PBO:0086291"}


id: MONDO:0044635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"DIAPH1-related sensorineural hearing loss-thrombocytopenia syndrome","secondary_identifiers":["GARD:17904","MEDGEN:1798888","Orphanet:494444","UMLS:C5567465"],"synonyms":[{"name":"DIAPH1-related sensorineural hearing loss-thrombocytopenia syndrome","type":"exact"}],"termid":"MONDO:0044635","xrefs":{"Monarch":{"xref_id":"0044635"}}}


id: PBO:0069582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 856, pseudogene","termid":"PBO:0069582"}


id: MONDO:0001041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dental caries that involves the dentine.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dental caries","termid":"MONDO:0005276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentin caries","secondary_identifiers":["DOID:10461","ICD9:521.02","SCTID:442551007","MEDGEN:540210","UMLS:C0266846"],"synonyms":[{"name":"compound dental caries","type":"exact"},{"name":"dental caries extending into dentine","type":"exact"},{"name":"dental caries of dentine","type":"exact"},{"name":"dentine dental caries","type":"exact"}],"termid":"MONDO:0001041","xrefs":{"Monarch":{"xref_id":"0001041"}}}


id: PBO:0045214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C7","termid":"PBO:0045214"}


id: SO:0001307
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_methyl_N6_threonylcarbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_methyl_N6_threonylcarbamoyladenosine","secondary_identifiers":["RNAMOD:013"],"synonyms":[{"name":"N6 methyl N6 threonylcarbamoyladenosine","type":"exact"},{"name":"N6-methyl-N6-threonylcarbamoyladenosine","type":"exact"},{"name":"m6t6A","type":"exact"}],"termid":"SO:0001307"}


id: PBO:0041082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"break repair meiotic recombinase recruitment factor 1","termid":"PBO:0041082"}


id: MOD:00152
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S'-(8alpha-FAD)-L-cystine.","definition_xrefs":["PubMed:10220347","RESID:AA0143","Unimod:50#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(8alpha-FAD)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-[8alpha-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]sulfanylpropanoic acid","type":"exact"},{"name":"8alpha-(S-cysteinyl)FAD","type":"exact"},{"name":"FAD","type":"related"},{"name":"Flavin adenine dinucleotide","type":"related"},{"name":"MOD_RES S-8alpha-FAD cysteine","type":"exact"},{"name":"S-(8alpha-FAD)-L-cysteine","type":"exact"},{"name":"S8aFADCys","type":"exact"}],"termid":"MOD:00152"}


id: GO:0019932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any intracellular signal transduction in which the signal is passed on within the cell via a second messenger; a small molecule or ion that can be quickly generated or released from intracellular stores, and can diffuse within the cell. Second-messenger signaling includes production or release of the second messenger, and effectors downstream of the second messenger that further transmit the signal within the cell.","definition_xrefs":["GOC:signaling","ISBN:0815316194","Wikipedia:Second_messenger_system","PMID:15221855"],"gene_count":0,"genotype_count":0,"name":"obsolete second-messenger-mediated signaling (obsolete GO:0019932)","synonyms":[{"name":"second messenger mediated signaling","type":"exact"},{"name":"second messenger mediated signalling","type":"exact"},{"name":"second messenger-mediated signaling","type":"exact"},{"name":"second messenger-mediated signalling","type":"exact"},{"name":"second-messenger-mediated signal transduction","type":"exact"},{"name":"second-messenger-mediated signalling","type":"exact"}],"termid":"GO:0019932"}


id: PBO:0052640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 8","termid":"PBO:0052640"}


id: PBO:0030216
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-alpha,alpha-trehalase_activity_increase_abolished_during_cellular_response_to_heat","termid":"PBO:0030216"}


id: PBO:0060448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme E1 subunit 1","termid":"PBO:0060448"}


id: MONDO:0700255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paraneoplastic syndrome that involves the renal system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder","termid":"MONDO:0002118"},{"relation_name":"is_a","term_name":"paraneoplastic syndrome","termid":"MONDO:0021073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paraneoplastic renal syndrome","termid":"MONDO:0700255","xrefs":{"Monarch":{"xref_id":"0700255"}}}


id: PR:O75001
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03822","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25D12.03c","secondary_identifiers":["UniProtKB:O75001"],"synonyms":[{"name":"Spom972h-MCM7","type":"exact"},{"name":"minichromosome maintenance protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O75001"}


id: MONDO:0004439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the periocular region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periocular meningioma","secondary_identifiers":["NCIT:C6777","MEDGEN:233849","DOID:8030","UMLS:C1335383"],"termid":"MONDO:0004439","xrefs":{"Monarch":{"xref_id":"0004439"}}}


id: MONDO:0019584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized lichen myxedematosus with monoclonal gammopathy or systemic symptoms is a form of atypical lichen myxedematosus, characterized by the appearance of several 2-4 mm erythematous waxy papules confined to a few sites that may be associated with either an immunoglobulin A (IgA) nephropathy in patients with acral persistent papular mucinosis; discrete papular lichen myxedematosus; a scleromyxedema-like involvement, with dysphagia, hoarseness, pulmonary involvement, and carpal tunnel syndrome; myositis without skin sclerosis; or paraproteinemia.","definition_xrefs":["Orphanet:90399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atypical lichen myxedematosus","termid":"MONDO:0019447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"localized lichen myxedematosus with monoclonal gammopathy or systemic symptoms","secondary_identifiers":["UMLS:C5681466","GARD:19143","MEDGEN:1843442"],"termid":"MONDO:0019584","xrefs":{"Monarch":{"xref_id":"0019584"}}}


id: GO:0033455
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GCA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"GCA codon-amino acid adaptor activity","synonyms":[{"name":"alanine tRNA","type":"related"}],"termid":"GO:0033455"}


id: PBO:0005865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0321 family protein 2","termid":"PBO:0005865"}


id: PBO:0090418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex kleisin subunit Rec8","termid":"PBO:0090418"}


id: PBO:0041851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 1 pseudogene 1","termid":"PBO:0041851"}


id: PBO:0088973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall 1,3-beta-glucan synthase catalytic subunit Bgs3","termid":"PBO:0088973"}


id: MONDO:0957496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, X-linked 112","secondary_identifiers":["UMLS:C5829589","OMIM:301111","MEDGEN:1840225"],"termid":"MONDO:0957496","xrefs":{"Monarch":{"xref_id":"0957496"}}}


id: MONDO:0009884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet prostacyclin receptor defect","secondary_identifiers":["OMIM:262875","UMLS:C1849774","MEDGEN:337912","MESH:C564884"],"synonyms":[{"name":"Vienna-Hietzing defect","type":"related"},{"name":"platelet prostacyclin receptor defect","type":"exact"}],"termid":"MONDO:0009884","xrefs":{"Monarch":{"xref_id":"0009884"}}}


id: GO:0004335
data:
  {"annotated_genes":["SJAG_02950"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77611],"is_not":false,"summary":null,"term":"GO:0004335"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose + ATP = alpha-D-galactose 1-phosphate + ADP + 2 H+.","definition_xrefs":["RHEA:13553","EC:2.7.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"galactokinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70355","KEGG_REACTION:R01092","MetaCyc:GALACTOKIN-RXN","Reactome:R-HSA-5610026"],"synonyms":[{"name":"ATP:D-galactose 1-phosphotransferase activity","type":"related"},{"name":"ATP:D-galactose-1-phosphotransferase activity","type":"related"},{"name":"galactokinase (phosphorylating)","type":"related"}],"termid":"GO:0004335","terms_by_termid":{"GO:0004335":null}}


id: PBO:0043025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 1B2, pseudogene","termid":"PBO:0043025"}


id: PBO:0080916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 5","termid":"PBO:0080916"}


id: PBO:0083575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps with verified gene GPR1/YDL035C; YDL034W is not an essential gene","termid":"PBO:0083575"}


id: PBO:0054121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1487","termid":"PBO:0054121"}


id: GO:0030686
data:
  {"annotated_genes":["SJAG_00538","SJAG_01115","SJAG_01275","SJAG_00879","SJAG_02300","SJAG_01272","SJAG_04224","SJAG_02759","SJAG_04033","SJAG_00245","SJAG_01799","SJAG_00965","SJAG_03156","SJAG_03654","SJAG_05187","SJAG_04346","SJAG_00838","SJAG_05186","SJAG_02372","SJAG_00572","SJAG_00882","SJAG_03931","SJAG_04847","SJAG_04339","SJAG_01169","SJAG_03617","SJAG_02250","SJAG_00142","SJAG_04069","SJAG_02681","SJAG_01494","SJAG_03252","SJAG_01877","SJAG_02830","SJAG_04979"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60732,66449,70770,71211,72203,74134,76402,76897,78302,92942,107393,113448,116104,117130],"is_not":false,"summary":null,"term":"GO:0030686"},{"annotations":[76335,78760,80510],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034457"},{"annotations":[98209,73249,80479],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030690"},{"annotations":[73059,78989],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030692"},{"annotations":[76602,75345,74149],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070545"},{"annotations":[72135,80058,77098,73850,71665],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034388"},{"annotations":[76391,74956,78902,94066,78464],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034456"}]},"cv_name":"cellular_component","definition":"A large ribonucleoprotein complex considered to be the earliest preribosomal complex. In S. cerevisiae, it has a size of 90S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins.","definition_xrefs":["PMID:15120992","GOC:krc","GOC:vw","PMID:12150911","PMID:12957375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_00245":null,"SJAG_00538":null,"SJAG_00572":null,"SJAG_00838":null,"SJAG_00879":null,"SJAG_00882":null,"SJAG_00965":null,"SJAG_01115":null,"SJAG_01169":null,"SJAG_01272":null,"SJAG_01275":null,"SJAG_01494":null,"SJAG_01799":null,"SJAG_01877":null,"SJAG_02250":null,"SJAG_02300":null,"SJAG_02372":null,"SJAG_02681":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_03156":null,"SJAG_03252":null,"SJAG_03617":null,"SJAG_03654":null,"SJAG_03931":null,"SJAG_04033":null,"SJAG_04069":null,"SJAG_04224":null,"SJAG_04339":null,"SJAG_04346":null,"SJAG_04847":null,"SJAG_04979":null,"SJAG_05186":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0030684"}],"interesting_parent_ids":["GO:0030684","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"90S preribosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030686","terms_by_termid":{"GO:0030686":null,"GO:0030690":null,"GO:0030692":null,"GO:0034388":null,"GO:0034456":null,"GO:0034457":null,"GO:0070545":null}}


