# terms

id: GO:0033952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,4-beta-D-linkages between D-galactose 4-sulfate and 3,6-anhydro-D-galactose-2-sulfate in iota-carrageenans.","definition_xrefs":["EC:3.2.1.157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016798","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"iota-carrageenase activity","secondary_identifiers":["MetaCyc:3.2.1.157-RXN"],"synonyms":[{"name":"iota-carrageenan 4-beta-D-glycanohydrolase (configuration-inverting) activity","type":"related"}],"termid":"GO:0033952"}


id: GO:0018597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AH2 + NH4+ + O2 = A + H+ + H2O + hydroxylamine.","definition_xrefs":["PMID:16347810","RHEA:27341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ammonia monooxygenase activity","secondary_identifiers":["EC:1.14.99.39"],"termid":"GO:0018597"}


id: GO:0045202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The junction between an axon of one neuron and a dendrite of another neuron, a muscle fiber or a glial cell. As the axon approaches the synapse it enlarges into a specialized structure, the presynaptic terminal bouton, which contains mitochondria and synaptic vesicles. At the tip of the terminal bouton is the presynaptic membrane; facing it, and separated from it by a minute cleft (the synaptic cleft) is a specialized area of membrane on the receiving cell, known as the postsynaptic membrane. In response to the arrival of nerve impulses, the presynaptic terminal bouton secretes molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane.","definition_xrefs":["GOC:aruk","PMID:29383328","PMID:24619342","ISBN:0198506732","PMID:31998110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction","termid":"GO:0030054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"synapse","secondary_identifiers":["Wikipedia:Chemical_synapse","NIF_Subcellular:sao914572699"],"synonyms":[{"name":"electrotonic synapse","type":"related"},{"name":"mixed synapse","type":"narrow"},{"name":"synaptic junction","type":"exact"}],"termid":"GO:0045202"}


id: FYPO:0004528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial translation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial translation phenotype","termid":"FYPO:0000632"},{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitochondrial translation","synonyms":[{"name":"abnormal mitochondrial protein biosynthesis","type":"exact"},{"name":"abnormal mitochondrial protein synthesis","type":"exact"},{"name":"abnormal mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial translation during vegetative growth","type":"exact"}],"termid":"FYPO:0004528"}


id: PBO:0003696
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focus formation at DNA damage sites, Sfr1-dependent","termid":"PBO:0003696"}


id: PR:O74729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peptidyl-prolyl cis-trans isomerase H that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02717","PANTHER:PTHR11071:SF58","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-prolyl cis-trans isomerase cyp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.04c","secondary_identifiers":["UniProtKB:O74729"],"synonyms":[{"name":"PPIase cyp3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPIH","type":"exact"},{"name":"rotamase cyp3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74729"}


id: PBO:0073302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 24","termid":"PBO:0073302"}


id: GO:0002894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of type II hypersensitivity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hypersensitivity","termid":"GO:0002885"},{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte mediated immunity","termid":"GO:0002888"},{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin mediated immune response","termid":"GO:0002891"},{"relation_name":"is_a","term_name":"regulation of type II hypersensitivity","termid":"GO:0002892"},{"relation_name":"positively_regulates","term_name":"type II hypersensitivity","termid":"GO:0002445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type II hypersensitivity","synonyms":[{"name":"activation of type II hypersensitivity","type":"narrow"},{"name":"stimulation of type II hypersensitivity","type":"narrow"},{"name":"up regulation of type II hypersensitivity","type":"exact"},{"name":"up-regulation of type II hypersensitivity","type":"exact"},{"name":"upregulation of type II hypersensitivity","type":"exact"}],"termid":"GO:0002894"}


id: PBO:0044491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 51 subfamily A member 1","termid":"PBO:0044491"}


id: MONDO:0008729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital adrenal hyperplasia due to 11 beta-hydroxylase (CYP11B1) deficiency is a rare form of congenital adrenal hyperplasia (CAH) characterized by glucocorticoid deficiency, hyperandrogenism, hypertension and virilization in females.","definition_xrefs":["Orphanet:90795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"congenital adrenal hyperplasia","termid":"MONDO:0018479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"congenital adrenal hyperplasia due to 11-beta-hydroxylase deficiency","secondary_identifiers":["NANDO:1200400","SCTID:124214007","NANDO:2200372","icd11.foundation:791376680","OMIM:202010","GARD:5658","MEDGEN:82783","UMLS:C0268292","MedDRA:10000002","ICD9:277.6","NCIT:C131085","MESH:C535978"],"synonyms":[{"name":"11-Beta-Hydroxylase deficiency","type":"related"},{"name":"CAH due to 11-beta-hydroxylase deficiency","type":"exact"},{"name":"CYP11B1 deficiency","type":"exact"},{"name":"P450C11B1 deficiency","type":"related"},{"name":"adrenal hyperplasia 4","type":"related"},{"name":"adrenal hyperplasia IV","type":"related"},{"name":"adrenal hyperplasia hypertensive form","type":"related"},{"name":"adrenal hyperplasia, congenital, due to 11-beta-hydroxylase deficiency","type":"exact"},{"name":"adrenal hyperplasia, congenital, due to steroid 11-BETA-HYDROXYLASE deficiency","type":"related"},{"name":"adrenal hyperplasia, hypertensive form","type":"related"},{"name":"steroid 11-Beta-Hydroxylase deficiency","type":"related"}],"termid":"MONDO:0008729","xrefs":{"Monarch":{"xref_id":"0008729"}}}


id: MONDO:0032605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 66","secondary_identifiers":["OMIM:618221","GARD:22579","UMLS:C4748732","DOID:0081227","MEDGEN:1648460"],"synonyms":[{"name":"MENTAL RETARDATION, AUTOSOMAL RECESSIVE 66","type":"related"},{"name":"MRT66","type":"related"},{"name":"intellectual developmental disorder, autosomal recessive 66","type":"exact"}],"termid":"MONDO:0032605","xrefs":{"Monarch":{"xref_id":"0032605"}}}


id: PBO:0080878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPEL3 divergent transcript","termid":"PBO:0080878"}


id: MONDO:0003484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete penis squamous cell carcinoma (obsolete MONDO:0003484)","termid":"MONDO:0003484","xrefs":{"Monarch":{"xref_id":"0003484"}}}


id: FYPO:0005997
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any small nuclear RNA (snRNA) primary transcript, snRNA precursor or processing intermediate, or mature snRNA measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"altered snRNA or precursor level","synonyms":[{"name":"abnormal snRNA or precursor level","type":"exact"},{"name":"altered snRNA or precursor accumulation","type":"related"},{"name":"altered snRNA or precursor level during mitotic cell cycle","type":"related"},{"name":"altered snRNA or precursor level during vegetative growth","type":"exact"},{"name":"altered snRNA or precursor transcript level","type":"exact"}],"termid":"FYPO:0005997"}


id: GO:0051079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of the nuclear membranes during the first division of meiosis.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear membrane disassembly","termid":"GO:0051078"},{"relation_name":"part_of","term_name":"meiosis I","termid":"GO:0007127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0061024","GO:0140013"],"is_obsolete":false,"name":"meiosis I nuclear membrane disassembly","synonyms":[{"name":"meiosis I nuclear envelope breakdown","type":"related"},{"name":"meiosis I nuclear envelope catabolism","type":"related"},{"name":"meiosis I nuclear envelope degradation","type":"related"},{"name":"meiosis I nuclear envelope disassembly","type":"related"}],"termid":"GO:0051079"}


id: PBO:0074132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 33 member 1","termid":"PBO:0074132"}


id: FYPO:0004556
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylcholine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular phosphatidylcholine level","synonyms":[{"name":"decreased cellular PC level","type":"exact"},{"name":"decreased cellular phosphatidylcholine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylcholine level during vegetative growth","type":"exact"},{"name":"decreased phosphatidylcholine accumulation","type":"related"},{"name":"reduced cellular phosphatidylcholine level","type":"exact"}],"termid":"FYPO:0004556"}


id: GO:0140791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2AX serine phosphate (position 140) + H2O = histone H2AX serine (position 140) + phosphate.","definition_xrefs":["PMID:18614045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone phosphatase activity","termid":"GO:0140789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0004721","GO:0140096","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone H2AXS140 phosphatase activity","synonyms":[{"name":"histone H2-S140 serine phosphatase activity","type":"exact"},{"name":"histone H2S140 phosphatase activity","type":"related"},{"name":"histone serine phosphatase activity (H2-S140 specific)","type":"exact"}],"termid":"GO:0140791"}


id: GO:0043408
data:
  {"annotated_genes":["SJAG_00318","SJAG_02000","SJAG_00845","SJAG_00424","SJAG_02486","SJAG_04666","SJAG_04825","SJAG_02013","SJAG_03185","SJAG_01114","SJAG_06592","SJAG_06622","SJAG_00027","SJAG_01978","SJAG_03453","SJAG_01199","SJAG_01787","SJAG_02392","SJAG_03893","SJAG_02945","SJAG_06621","SJAG_03969","SJAG_01587","SJAG_05000","SJAG_03705","SJAG_02183","SJAG_04522","SJAG_03828","SJAG_02135","SJAG_00781","SJAG_03903","SJAG_00975","SJAG_02233","SJAG_02878","SJAG_00610","SJAG_01885","SJAG_03263"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74963,80713],"is_not":false,"summary":null,"term":"GO:0043408"},{"annotations":[107973,99772,118717,104143,107409,96182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[88526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043409"},{"annotations":[96304,95372,118718,99774,117471,91992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[107499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[91094,89761,103186,88404,118301,92747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[112198,109311,109312,117763,109308,112864,118684,95593,109307,109313,109309,109310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[104045,115977,88463,91175,115010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signal transduction mediated by the MAP kinase (MAPK) cascade.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"MAPK cascade","termid":"GO:0000165"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00318":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_00975":null,"SJAG_01114":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_01787":null,"SJAG_01885":null,"SJAG_01978":null,"SJAG_02000":null,"SJAG_02013":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02233":null,"SJAG_02392":null,"SJAG_02486":null,"SJAG_02878":null,"SJAG_02945":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03453":null,"SJAG_03705":null,"SJAG_03828":null,"SJAG_03893":null,"SJAG_03903":null,"SJAG_03969":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of MAPK cascade","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of MAP kinase cascade","type":"exact"},{"name":"regulation of MAP kinase kinase kinase cascade","type":"exact"},{"name":"regulation of MAPKKK cascade","type":"exact"},{"name":"regulation of mitogen activated protein kinase cascade","type":"exact"},{"name":"regulation of mitogen activated protein kinase kinase kinase cascade","type":"exact"},{"name":"regulation of mitogen-activated protein kinase cascade","type":"exact"},{"name":"regulation of mitogen-activated protein kinase kinase kinase cascade","type":"exact"}],"termid":"GO:0043408","terms_by_termid":{"GO:0043408":null,"GO:0043409":null,"GO:0062038":null,"GO:0180040":null,"GO:1900745":null,"GO:1903138":null,"GO:1903139":null,"GO:1903753":null}}


id: GO:0030893
data:
  {"annotated_genes":["SJAG_05019","SJAG_01831","SJAG_03926","SJAG_03698"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88127,108097,108178,117451],"is_not":false,"summary":null,"term":"GO:0030893"}]},"cv_name":"cellular_component","definition":"A cohesin complex that mediates sister chromatid cohesion during meiosis; has a subunit composition distinct from that of the mitotic cohesin complex.","definition_xrefs":["GOC:mah","PMID:12750522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cohesin complex","termid":"GO:0008278"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01831":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"meiotic cohesin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034991"],"synonyms":[{"name":"nuclear meiotic cohesin complex","type":"related"}],"termid":"GO:0030893","terms_by_termid":{"GO:0030893":null}}


id: PBO:0069555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 827, pseudogene","termid":"PBO:0069555"}


id: PBO:0068925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 168, pseudogene","termid":"PBO:0068925"}


id: GO:0033891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage to give 5'-phosphooligonucleotide end-products, with a preference for cleavage within the sequence CC.","definition_xrefs":["EC:3.1.21.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"CC-preferring endodeoxyribonuclease activity","secondary_identifiers":["MetaCyc:3.1.21.6-RXN"],"synonyms":[{"name":"5'-CC-3'-preferring endodeoxyribonuclease activity","type":"related"},{"name":"Streptomyces glaucescens exocytoplasmic dodeoxyribonuclease activity","type":"related"},{"name":"Streptomyces glaucescens exocytoplasmic endodeoxyribonuclease activity","type":"related"},{"name":"Streptomyces glaucescens exocytoplasmic endonuclease activity","type":"related"}],"termid":"GO:0033891"}


id: MONDO:0003076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinoblastoma that only involves a single eye.","definition_xrefs":["NCIT:C8714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"unilateral retinoblastoma","secondary_identifiers":["DOID:4651","UMLS:C0854915","MEDGEN:208929"],"termid":"MONDO:0003076","xrefs":{"Monarch":{"xref_id":"0003076"}}}


id: PBO:0005307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp13 (predicted)","termid":"PBO:0005307"}


id: GO:0008397
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a steroid + reduced [NADPH--hemoprotein reductase] + O2 = a 12-alpha-hydroxysteroid + oxidized [NADPH--hemoprotein reductase]- H2O +H+.","definition_xrefs":["EC:1.14.14.139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sterol 12-alpha-hydroxylase activity","secondary_identifiers":["RHEA:46752"],"synonyms":[{"name":"cytochrome P450 CYP8B1","type":"narrow"}],"termid":"GO:0008397"}


id: PBO:0082753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat; COPII coat is required for cargo selection during vesicle formation in ER to Golgi transport; scaffolding function of Lst1p required to generate vesicles that can accommodate difficult cargo proteins that include large oligomeric assemblies and asymmetrically distributed membrane proteins; with Atg40p acts in autophagy of the ER; homologous to Sec24p and Sfb2p","termid":"PBO:0082753"}


id: PBO:0064161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IIF","termid":"PBO:0064161"}


id: MONDO:0003294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign smooth muscle neoplasm arising from the pericardium. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyoma","termid":"MONDO:0001572"},{"relation_name":"is_a","term_name":"benign neoplasm of pericardium","termid":"MONDO:0021514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"pericardium leiomyoma","secondary_identifiers":["DOID:5137","UMLS:C1335380","MEDGEN:233321","NCIT:C6743"],"synonyms":[{"name":"leiomyoma of pericardium","type":"exact"},{"name":"leiomyoma of the pericardium","type":"exact"},{"name":"pericardial leiomyoma","type":"exact"},{"name":"pericardium leiomyoma","type":"exact"}],"termid":"MONDO:0003294","xrefs":{"Monarch":{"xref_id":"0003294"}}}


id: MONDO:0011437
data:
  {"annotated_genes":["SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85593],"is_not":false,"summary":null,"term":"MONDO:0011437"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 4, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:347655","MESH:C565792","UMLS:C1858516","DOID:0070291","GARD:15367","OMIM:604321"],"synonyms":[{"name":"MCPH4","type":"related"},{"name":"microcephaly 4, primary, autosomal recessive","type":"exact"}],"termid":"MONDO:0011437","terms_by_termid":{"MONDO:0011437":null},"xrefs":{"Monarch":{"xref_id":"0011437"}}}


id: GO:1900430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of filamentous growth","termid":"GO:0090033"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"positively_regulates","term_name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of filamentous growth of a population of unicellular organisms","synonyms":[{"name":"activation of filamentous growth of a population of unicellular organisms","type":"narrow"},{"name":"up regulation of filamentous growth of a population of unicellular organisms","type":"exact"},{"name":"up-regulation of filamentous growth of a population of unicellular organisms","type":"exact"},{"name":"upregulation of filamentous growth of a population of unicellular organisms","type":"exact"}],"termid":"GO:1900430"}


id: MONDO:0004746
data:
  {"annotated_genes":["SJAG_04003","SJAG_04601"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010912"},{"annotations":[85955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958176"}]},"cv_name":"mondo","definition":"A myopathy that involves the extra-ocular muscle.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye adnexa disorder","termid":"MONDO:0000462"},{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"disorder of visual system","termid":"MONDO:0024458"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04003":null,"SJAG_04601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy of extraocular muscle","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:929","ICD9:376.82","MEDGEN:509895","UMLS:C0155286","SCTID:57130002"],"synonyms":[{"name":"extra-ocular muscle myopathy","type":"exact"},{"name":"myopathy of extra-ocular muscle","type":"exact"},{"name":"myopathy of extraocular muscles","type":"exact"}],"termid":"MONDO:0004746","terms_by_termid":{"MONDO:0010912":null,"MONDO:0958176":null},"xrefs":{"Monarch":{"xref_id":"0004746"}}}


id: MONDO:1011351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Psychiatric disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psychiatric disorder, non-human animal","termid":"MONDO:1011351","xrefs":{"Monarch":{"xref_id":"1011351"}}}


id: PR:O94714
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein spt2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.02c","synonyms":[{"name":"Spom972h-spt2","type":"exact"}],"termid":"PR:O94714"}


id: PBO:0002978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione synthase activity (predicted)","termid":"PBO:0002978"}


id: MONDO:0015379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cervical dermoid cyst is a rare, benign cutaneous neoplasm containing keratinized epithelium and dermal derivatives, such as hair follicles, sweat and sebaceous glands, smooth muscle or fibroadipose tissue which usually manifests as a slow-growing, painless mass in the submandibular or sublingual space. Depending on the location, and especially after sudden enlargement, it can cause dyspnea, dysphagia or dysphonia.","definition_xrefs":["Orphanet:141046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermoid cyst","termid":"MONDO:0002378"},{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"},{"relation_name":"is_a","term_name":"neoplasm of neck","termid":"MONDO:0021351"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical dermoid cyst","secondary_identifiers":["MEDGEN:1643725","SCTID:763129001","GARD:19937","UMLS:C4706299"],"synonyms":[{"name":"dermoid cyst of the neck","type":"exact"}],"termid":"MONDO:0015379","xrefs":{"Monarch":{"xref_id":"0015379"}}}


id: GO:0001310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Increase in abundance of circular DNA molecules containing ribosomal DNA repeats in dividing cells as they age. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats, and then replicated independently of chromosomal replication.","definition_xrefs":["GOC:jh","PMID:12044934"],"gene_count":0,"genotype_count":0,"name":"obsolete extrachromosomal rDNA circle accumulation involved in replicative cell aging (obsolete GO:0001310)","synonyms":[{"name":"extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"}],"termid":"GO:0001310"}


id: GO:0016723
data:
  {"annotated_genes":["SJAG_04042","SJAG_04459"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79377,74900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030586"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction in which the metal ion is reduced and NAD+ or NADP+ acts as an electron acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions","termid":"GO:0016722"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04042":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.16.1.-"],"synonyms":[{"name":"oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor","type":"related"},{"name":"oxidoreductase activity, reducing metal ions, NAD or NADP as acceptor","type":"related"}],"termid":"GO:0016723","terms_by_termid":{"GO:0030586":null}}


id: MONDO:0002929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary immaturity","secondary_identifiers":["ICD9:770.4","UMLS:C0270163","MEDGEN:542574","DOID:424","SCTID:42908004"],"synonyms":[{"name":"primary atelectasis of newborn","type":"exact"},{"name":"primary atelectasis, in perinatal period","type":"exact"}],"termid":"MONDO:0002929","xrefs":{"Monarch":{"xref_id":"0002929"}}}


id: PBO:0071058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 60","termid":"PBO:0071058"}


id: PR:Q09948
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit rsc4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.15","synonyms":[{"name":"RSC complex subunit rsc4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rsc4","type":"exact"},{"name":"bromodomain-containing protein brd1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09948"}


id: FYPO:0001472
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing tacrolimus during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth during cellular response to osmotic stress","termid":"FYPO:0001021"},{"relation_name":"is_a","term_name":"normal growth on tacrolimus","termid":"FYPO:0001470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0000257","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on tacrolimus during osmotic stress","synonyms":[{"name":"normal cell population growth in presence of tacrolimus during osmotic stress","type":"exact"},{"name":"normal cell population growth on tacrolimus and sorbitol","type":"narrow"},{"name":"normal cell population growth on tacrolimus during osmotic stress","type":"exact"},{"name":"normal cellular response to FK506 during osmotic stress","type":"exact"},{"name":"normal cellular response to tacrolimus and osmotic stress","type":"related"},{"name":"normal cellular response to tacrolimus and sorbitol","type":"related"},{"name":"normal cellular response to tacrolimus during osmotic stress","type":"related"},{"name":"normal vegetative cell population growth on tacrolimus during osmotic stress","type":"exact"}],"termid":"FYPO:0001472"}


id: PBO:0057801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3123","termid":"PBO:0057801"}


id: MONDO:0000925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung with reduced markings on its chest radiograph and increased areas of transradiancy (hyperlucency). A hyperlucent lung is usually associated with pulmonary emphysema or pneumothorax.","definition_xrefs":["MESH:D019568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary emphysema","termid":"MONDO:0004849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperlucent lung","secondary_identifiers":["DOID:10032","MEDGEN:101178","UMLS:C0524799"],"termid":"MONDO:0000925","xrefs":{"Monarch":{"xref_id":"0000925"}}}


id: PR:O13692
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gas5 gene.","definition_xrefs":["UniProtKB:O13692","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase gas5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.13c","synonyms":[{"name":"Spom972h-gas5","type":"exact"}],"termid":"PR:O13692"}


id: PBO:0069842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1128, pseudogene","termid":"PBO:0069842"}


id: PBO:0068510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 100, pseudogene","termid":"PBO:0068510"}


id: PR:Q92348
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug183 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 183 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.03c","synonyms":[{"name":"Spom972h-mug183","type":"exact"}],"termid":"PR:Q92348"}


id: PBO:0049076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 107","termid":"PBO:0049076"}


id: GO:0006583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of melanin from other compounds, including tyrosine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine metabolic process","termid":"GO:0006570"},{"relation_name":"is_a","term_name":"melanin biosynthetic process","termid":"GO:0042438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"melanin biosynthetic process from tyrosine","synonyms":[{"name":"melanin anabolism from tyrosine","type":"exact"},{"name":"melanin formation from tyrosine","type":"exact"},{"name":"melanin synthesis from tyrosine","type":"exact"}],"termid":"GO:0006583"}


id: GO:2000899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a xyloglucan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"},{"relation_name":"is_a","term_name":"xyloglucan metabolic process","termid":"GO:0010411"},{"relation_name":"is_a","term_name":"hemicellulose catabolic process","termid":"GO:2000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0071554"],"is_obsolete":false,"name":"xyloglucan catabolic process","synonyms":[{"name":"xyloglucan catabolism","type":"exact"}],"termid":"GO:2000899"}


id: PBO:0066323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger and CCCH-type domains 1","termid":"PBO:0066323"}


id: MONDO:0003524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated neuroendocrine tumor that arises from the stomach. It produces gastrin and it may be associated with Zollinger-Ellison syndrome.","definition_xrefs":["NCIT:C27444"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"gastric cancer","termid":"MONDO:0001056"},{"relation_name":"is_a","term_name":"gastrin-producing neuroendocrine tumor","termid":"MONDO:0003523"},{"relation_name":"is_a","term_name":"gastric neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric gastrin-producing neuroendocrine tumor","secondary_identifiers":["UMLS:C1333767","DOID:5579","MEDGEN:232230"],"synonyms":[{"name":"gastric G-cell gastrin producing tumor","type":"exact"},{"name":"gastric G-cell gastrin producing tumour","type":"exact"},{"name":"gastric gastrin producing tumor","type":"exact"},{"name":"gastric gastrin producing tumour","type":"exact"},{"name":"gastric gastrin-producing NET","type":"exact"},{"name":"gastric gastrin-producing neuroendocrine tumor","type":"exact"},{"name":"gastric gastrinoma","type":"related"},{"name":"gastrin producing neuroendocrine tumor of the stomach","type":"exact"},{"name":"gastrin producing neuroendocrine tumour of the stomach","type":"exact"},{"name":"gastrin producing tumor of the stomach","type":"exact"},{"name":"gastrin producing tumour of the stomach","type":"exact"},{"name":"gastrin-producing neuroendocrine tumor of stomach","type":"exact"},{"name":"gastrin-producing neuroendocrine tumor of the stomach","type":"exact"},{"name":"gastrin-producing neuroendocrine tumour of stomach","type":"exact"},{"name":"gastrin-producing neuroendocrine tumour of the stomach","type":"exact"},{"name":"stomach gastrin-producing neuroendocrine tumor","type":"exact"},{"name":"stomach gastrin-producing neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0003524","xrefs":{"Monarch":{"xref_id":"0003524"}}}


id: PBO:0062762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily P member 2 pseudogene","termid":"PBO:0062762"}


id: SO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is engineered and foreign.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"engineered_gene","termid":"SO:0000280"},{"relation_name":"is_a","term_name":"foreign_gene","termid":"SO:0000285"},{"relation_name":"is_a","term_name":"engineered_foreign_region","termid":"SO:0000805"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_foreign_gene","synonyms":[{"name":"engineered foreign gene","type":"exact"}],"termid":"SO:0000281"}


id: PATO:0001432
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's decomposition into component parts.","definition_xrefs":["Medical-dictionary:Medical-dictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viability","termid":"PATO:0000169"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decayed","termid":"PATO:0001432"}


id: PBO:0045467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D4","termid":"PBO:0045467"}


id: GO:0060796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that results in cells adopting an endoderm, ectoderm or mesoderm cell fate.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in primary germ layer cell fate commitment (obsolete GO:0060796)","termid":"GO:0060796"}


id: PBO:0041231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 53","termid":"PBO:0041231"}


id: PBO:0027497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_FR901464","termid":"PBO:0027497"}


id: MONDO:0002478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biphasic neoplasm that arises from the ovary or the testis. It is characterized by the presence of neoplastic germ cells and neoplastic sex cord-stromal cells. It includes the gonadoblastoma and mixed germ cell-sex cord stromal tumor, unclassifiable.","definition_xrefs":["NCIT:C5241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed germ cell-sex cord-stromal tumor","secondary_identifiers":["MEDGEN:232941","UMLS:C1321220","DOID:2996"],"synonyms":[{"name":"mixed germ cell-Sex cord neoplasm","type":"exact"},{"name":"mixed germ cell-Sex cord tumor","type":"exact"},{"name":"mixed germ cell-Sex cord tumour","type":"exact"},{"name":"mixed germ cell-Sex cord-stromal neoplasm","type":"exact"},{"name":"mixed germ cell-Sex cord-stromal tumor","type":"exact"},{"name":"mixed germ cell-Sex cord-stromal tumour","type":"exact"},{"name":"mixed germ cell-sex cord-stromal tumor (morphologic abnormality)","type":"exact"},{"name":"mixed germ cell-sex cord-stromal tumour (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002478","xrefs":{"Monarch":{"xref_id":"0002478"}}}


id: PBO:0027566
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_mitotic_spindle_microtubules_protruding_beyond_spindle_pole_body","termid":"PBO:0027566"}


id: MONDO:0011985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Hyper IgM syndrome which is a defect in class switch recombination downstream of the AICDA gene that does not impair somatic hypermutation.","definition_xrefs":["Wikipedia:Hyper-IgM_syndrome_type_4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyper-IgM syndrome","termid":"MONDO:0003947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"hyper-IgM syndrome type 4","secondary_identifiers":["MESH:C564277","DOID:0060760","OMIM:608184","UMLS:C1842413","Orphanet:101091","GARD:10580","MEDGEN:330847"],"synonyms":[{"name":"HIGM4","type":"exact"},{"name":"hyper IgM syndrome 4","type":"related"},{"name":"hyper-IgM syndrome 4","type":"related"},{"name":"hyper-IgM syndrome type 4","type":"exact"},{"name":"immunodeficiency with hyper IgM type 4","type":"related"},{"name":"immunodeficiency with hyper-IgM type 4","type":"related"},{"name":"immunodeficiency with hyper-IgM, type 4","type":"related"}],"termid":"MONDO:0011985","xrefs":{"Monarch":{"xref_id":"0011985"}}}


id: FYPO:0006210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to copper ion starvation is lower than normal during spore germination. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:28572514","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to copper ion starvation during vegetative growth","termid":"FYPO:0003280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion starvation during spore germination","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion starvation during spore germination","type":"related"},{"name":"decreased RNA level during cellular response to copper ion depletion during spore germination","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion deprivation during spore germination","type":"exact"},{"name":"decreased RNA level during cellular response to copper ion starvation during spore germination during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to copper starvation during spore germination","type":"exact"},{"name":"decreased RNA level during copper ion starvation during spore germination","type":"exact"},{"name":"decreased mRNA level during cellular response to copper ion starvation during spore germination","type":"narrow"},{"name":"decreased transcript level during cellular response to copper ion starvation during spore germination","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion starvation during spore germination","type":"exact"}],"termid":"FYPO:0006210"}


id: PBO:0003456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit, Anp family (predicted)","termid":"PBO:0003456"}


id: MONDO:0044989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the pes.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete foot disorder (obsolete MONDO:0044989)","secondary_identifiers":["SCTID:118932009","MESH:D005534"],"synonyms":[{"name":"disease of pes","type":"exact"},{"name":"disease or disorder of pes","type":"exact"},{"name":"disorder of foot","type":"exact"},{"name":"disorder of pes","type":"exact"},{"name":"foot disease","type":"exact"},{"name":"pes disease","type":"exact"},{"name":"pes disease or disorder","type":"exact"}],"termid":"MONDO:0044989","xrefs":{"Monarch":{"xref_id":"0044989"}}}


id: MONDO:0100170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing restless legs syndrome.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restless legs syndrome, susceptibility to","secondary_identifiers":["OMIMPS:102300"],"termid":"MONDO:0100170","xrefs":{"Monarch":{"xref_id":"0100170"}}}


id: GO:0098797
data:
  {"annotated_genes":["SJAG_05229","SJAG_02805","SJAG_00800","SJAG_00104","SJAG_03081","SJAG_04675","SJAG_04026","SJAG_01978","SJAG_02233","SJAG_02444","SJAG_04677","SJAG_01167"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58348,108699,74706,78441],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0030122"},{"annotations":[71235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038038"},{"annotations":[74639,75658,80705,106859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005834"},{"annotations":[78010,78251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033573"},{"annotations":[74816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"Any protein complex that is part of the plasma membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01978":null,"SJAG_02233":null,"SJAG_02444":null,"SJAG_02805":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"plasma membrane protein complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098797","terms_by_termid":{"GO:0005834":null,"GO:0005891":null,"GO:0030122":null,"GO:0033573":null,"GO:0038038":null}}


id: PBO:0069273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 529, pseudogene","termid":"PBO:0069273"}


id: GO:2000137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell proliferation involved in heart morphogenesis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000136"},{"relation_name":"negatively_regulates","term_name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation involved in heart morphogenesis","termid":"GO:2000137"}


id: FYPO:0005571
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[119762,119751,119758,119750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell periphery does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery during vegetative growth","termid":"FYPO:0005570"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":2,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abolished protein localization to cell periphery during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta"],"synonyms":[{"name":"abolished protein localisation to cell periphery during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell periphery during mitotic cell cycle","type":"related"},{"name":"protein absent from cell periphery during vegetative growth","type":"related"},{"name":"protein localization to cell periphery abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0005571","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0007177":null}}


id: MONDO:0019453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Refractory cytopenias with multilineage dysplasia (RCMD) is a frequent subtype of myelodysplastic syndrome (MDS) characterized by 1 or more cytopenias in the peripheral blood and dysplasia in 2 or more myeloid lineages.","definition_xrefs":["Orphanet:86836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"refractory hematologic cancer","termid":"MONDO:0004111"},{"relation_name":"is_a","term_name":"myelodysplastic syndrome","termid":"MONDO:0018881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"myelodysplastic syndrome with multilineage dysplasia","secondary_identifiers":["UMLS:C0796466","SCTID:415285009","ICDO:9985/3","NCIT:C8574","GARD:19069","ICD10CM:D46.A","ICD9:238.72","MedDRA:10067959","MEDGEN:208726"],"synonyms":[{"name":"MDS-MLD","type":"exact"},{"name":"RCMD","type":"exact"},{"name":"refractory cytopenia with multilineage dysplasia","type":"exact"}],"termid":"MONDO:0019453","xrefs":{"Monarch":{"xref_id":"0019453"}}}


id: PBO:0044563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in azoospermia 4","termid":"PBO:0044563"}


id: GO:1905300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intestinal epithelial cell development.","definition_xrefs":["GOC:rph","GOC:TermGenie","GOC:BHF_miRNA","GO_REF:0000058","PMID:23904268","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of intestinal epithelial cell development","termid":"GO:1905298"},{"relation_name":"positively_regulates","term_name":"intestinal epithelial cell development","termid":"GO:0060576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intestinal epithelial cell development","synonyms":[{"name":"activation of intestinal epithelial cell development","type":"narrow"},{"name":"up regulation of intestinal epithelial cell development","type":"exact"},{"name":"up-regulation of intestinal epithelial cell development","type":"exact"},{"name":"upregulation of intestinal epithelial cell development","type":"exact"}],"termid":"GO:1905300"}


id: GO:0042074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of individual cells within the blastocyst to help establish the multi-layered body plan of the organism (gastrulation). For example, the migration of cells from the surface to the interior of the embryo (ingression).","definition_xrefs":["PMID:16099638","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ameboidal-type cell migration","termid":"GO:0001667"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in gastrulation","termid":"GO:0042074"}


id: PR:P36623
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.06","secondary_identifiers":["UniProtKB:P36623"],"synonyms":[{"name":"BPG-dependent PGAM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MPGM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PGAM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Phosphoglyceromutase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC26F1.06","type":"related"},{"name":"Spom972h-gpmA","type":"exact"}],"termid":"PR:P36623"}


id: MONDO:0032575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diarrhea","termid":"MONDO:0000824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrhea 9","secondary_identifiers":["OMIM:618168","MEDGEN:1648425","UMLS:C4748517"],"synonyms":[{"name":"DIAR9","type":"related"},{"name":"DIARRHEA 9","type":"related"}],"termid":"MONDO:0032575","xrefs":{"Monarch":{"xref_id":"0032575"}}}


id: PBO:0091432
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat for base excision activity of 1,N(6)-ethenoadenine = 5.3 x 10^-3 s-1","termid":"PBO:0091432"}


id: PBO:0116282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear envelope protein involved in DSB repair during late mitosis; forms nuclear envelope patches associated with Rad52p-containing DNA repair foci, and accelerates homologous recombination downstream of DNA end resection; mutant is defective in directing meiotic recombination events to homologous chromatids; upregulated after DNA damage in late mitosis; null mutant is hypersensitive to DSBs; non-tagged protein is detected in highly purified mitochondria and is phosphorylated","termid":"PBO:0116282"}


id: MOD:01139
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioctyl phthalate sodium adduct","termid":"MOD:01139"}


id: PBO:0087368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific protein with a leucine zipper motif; subunit of the MIS complex which controls mRNA methylation during during the induction of sporulation","termid":"PBO:0087368"}


id: MONDO:0012784
data:
  {"annotated_genes":["SJAG_00933"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86640],"is_not":false,"summary":null,"term":"MONDO:0012784"}]},"cv_name":"mondo","definition":"This syndrome is characterized by childhood-onset progressive ataxia and cerebellar atrophy.","definition_xrefs":["Orphanet:139485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"},{"relation_name":"is_a","term_name":"coenzyme Q10 deficiency","termid":"MONDO:0018151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005559","MONDO:0005244","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive ataxia due to ubiquinone deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:436985","MESH:C567436","DOID:0070241","GARD:10294","SCTID:725394006","OMIM:612016","UMLS:C2677589"],"synonyms":[{"name":"ARCA2","type":"exact"},{"name":"COQ10D4","type":"related"},{"name":"SCAR9","type":"exact"},{"name":"autosomal recessive ataxia due to coenzyme Q10 deficiency","type":"exact"},{"name":"autosomal recessive cerebellar ataxia type 2","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia 9","type":"related"},{"name":"autosomal recessive spinocerebellar ataxia type 9","type":"exact"},{"name":"coenzyme Q10 deficiency, primary, 4","type":"related"},{"name":"coenzyme Q10 deficiency, primary, type 4","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 9","type":"related"}],"termid":"MONDO:0012784","terms_by_termid":{"MONDO:0012784":null},"xrefs":{"Monarch":{"xref_id":"0012784"}}}


id: PBO:0030110
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_methionine_import","termid":"PBO:0030110"}


id: GO:0008241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the release of C-terminal dipeptides from a polypeptide chain.","definition_xrefs":["EC:3.4.15.-","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016787","GO:0008233","GO:0003824"],"is_obsolete":false,"name":"peptidyl-dipeptidase activity","termid":"GO:0008241"}


id: PBO:0083422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized gene YPL034W; YPL035C is not an essential gene","termid":"PBO:0083422"}


id: GO:0102491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dGTP + 2 H2O = dGMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dGTP phosphohydrolase activity (obsolete GO:0102491)","termid":"GO:0102491"}


id: GO:0010154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the fruit over time, from its formation to the mature structure. The fruit is a reproductive body of a seed plant.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit development","termid":"GO:0010154"}


id: MONDO:0975746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 92, autosomal recessive","secondary_identifiers":["OMIM:620911"],"termid":"MONDO:0975746","xrefs":{"Monarch":{"xref_id":"0975746"}}}


id: GO:0008270
data:
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id: GO:0018393
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id: PBO:0002679
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id: GO:0031296
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id: MONDO:1011343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Perceptual disorders that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"},{"relation_name":"is_a","term_name":"psychiatric disorder, non-human animal","termid":"MONDO:1011351"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perceptual disorders, non-human animal","termid":"MONDO:1011343","xrefs":{"Monarch":{"xref_id":"1011343"}}}


id: PBO:0069274
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 530, pseudogene","termid":"PBO:0069274"}


id: PBO:0069111
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 360, pseudogene","termid":"PBO:0069111"}


id: GO:0001976
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id: GO:0060478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The calcium ion regulated exocytosis which results in fusion of the acrosomal vesicle with the plasma membrane of the sperm as part of the acrosome reaction.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-ion regulated exocytosis","termid":"GO:0017156"},{"relation_name":"part_of","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"acrosomal vesicle exocytosis","synonyms":[{"name":"acrosomal granule exocytosis","type":"related"},{"name":"acrosome exocytosis","type":"exact"}],"termid":"GO:0060478"}


id: MONDO:0008263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant polycystic kidney disease in which the cause of the disease is a mutation in the PKD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic kidney disease","termid":"MONDO:0004691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0000426"],"is_obsolete":false,"name":"polycystic kidney disease 1","secondary_identifiers":["MEDGEN:461191","SCTID:253878003","MESH:C536326","OMIM:173900","UMLS:C3149841","GARD:18597","DOID:0110858"],"synonyms":[{"name":"APKD1","type":"exact"},{"name":"PKD1","type":"exact"},{"name":"PKD1 autosomal dominant polycystic kidney disease","type":"exact"},{"name":"Potter type 3 polycystic kidney disease","type":"related"},{"name":"Potter type 3 polycystic kidney disease, formerly","type":"related"},{"name":"autosomal dominant polycystic kidney disease caused by mutation in PKD1","type":"exact"},{"name":"polycystic kidney disease 1","type":"exact"},{"name":"polycystic kidney disease 1 with or without polycystic liver disease","type":"related"},{"name":"polycystic kidney disease type 1","type":"exact"},{"name":"polycystic kidney disease, adult","type":"related"},{"name":"polycystic kidney disease, adult, type 1","type":"related"},{"name":"polycystic kidney disease, adult, type I","type":"exact"}],"termid":"MONDO:0008263","xrefs":{"Monarch":{"xref_id":"0008263"}}}


id: FYPO:0006492
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which chitin synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal chitin synthase activity","termid":"FYPO:0006491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abolished chitin synthase activity","synonyms":[{"name":"chitin synthase activity abolished","type":"exact"}],"termid":"FYPO:0006492"}


id: GO:1903009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a proteasome complex into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex disassembly","termid":"GO:0032984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proteasome complex disassembly","synonyms":[{"name":"26S proteasome disassembly","type":"narrow"},{"name":"proteasome degradation","type":"exact"},{"name":"proteasome disassembly","type":"exact"}],"termid":"GO:1903009"}


id: PBO:0075720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorcin pseudogene 1","termid":"PBO:0075720"}


id: MONDO:1011594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rickets that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rickets, non-human animal","termid":"MONDO:1011456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rickets, horse","secondary_identifiers":["OMIA:002364-9796"],"termid":"MONDO:1011594","xrefs":{"Monarch":{"xref_id":"1011594"}}}


id: GO:0050399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,12-dihydroxanthommatin + NAD+ = H+ + NADH + xanthommatin.","definition_xrefs":["EC:1.3.1.41","RHEA:13417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"xanthommatin reductase activity","secondary_identifiers":["MetaCyc:XANTHOMMATIN-REDUCTASE-RXN","KEGG_REACTION:R03787"],"synonyms":[{"name":"5,12-dihydroxanthommatin:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050399"}


id: PBO:0079355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TUBA1B antisense RNA 1","termid":"PBO:0079355"}


id: GO:0098751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a bone cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone cell development","termid":"GO:0098751"}


id: PBO:0082450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-24(28) sterol reductase; catalyzes the final step in ergosterol biosynthesis; mutants are viable, but lack ergosterol","termid":"PBO:0082450"}


id: PBO:0078861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 9","termid":"PBO:0078861"}


id: PBO:0044571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 zinc finger pseudogene 1","termid":"PBO:0044571"}


id: FYPO:0003708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which a normal proportion of cells in the population undergoes conjugation with wild type h+ cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal conjugation frequency","termid":"FYPO:0003797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000301"},{"rel_name":"part_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0000257"],"is_obsolete":false,"name":"normal frequency of conjugation with h+ cells","synonyms":[{"name":"normal conjugation with WT h+ cells","type":"exact"},{"name":"normal frequency of conjugation with h plus cells","type":"exact"},{"name":"normal frequency of mating with h+ cells","type":"exact"}],"termid":"FYPO:0003708"}


id: PBO:0041717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin","termid":"PBO:0041717"}


id: PBO:0017820
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Caffeine Induced cell Death","termid":"PBO:0017820"}


id: PBO:0083155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF SYG1/YIL047C","termid":"PBO:0083155"}


id: GO:0006144
data:
  {"annotated_genes":["SJAG_04297","SJAG_05287","SJAG_04299","SJAG_03140","SJAG_01997","SJAG_06634","SJAG_02364","SJAG_01070","SJAG_04300","SJAG_01661","SJAG_01814","SJAG_01081","SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70280,75651],"is_not":false,"summary":null,"term":"GO:0006144"},{"annotations":[110735,117747,71046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046084"},{"annotations":[98137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046083"},{"annotations":[74302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"},{"annotations":[68454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006147"},{"annotations":[75991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046100"},{"annotations":[60170,114891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009113"},{"annotations":[73869,92105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006145"},{"annotations":[117751],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase metabolic process","termid":"GO:0009112"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":13,"genes_by_uniquename":{"SJAG_01070":null,"SJAG_01081":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_01997":null,"SJAG_02364":null,"SJAG_03140":null,"SJAG_04297":null,"SJAG_04299":null,"SJAG_04300":null,"SJAG_05287":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleobase metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine base metabolic process","type":"exact"},{"name":"purine base metabolism","type":"exact"},{"name":"purine metabolic process","type":"narrow"},{"name":"purine metabolism","type":"narrow"}],"termid":"GO:0006144","terms_by_termid":{"GO:0006144":null,"GO:0006145":null,"GO:0006147":null,"GO:0006168":null,"GO:0009113":null,"GO:0009115":null,"GO:0046083":null,"GO:0046084":null,"GO:0046100":null}}


id: PBO:0117376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome small subunit biogenesis GTPase related protein Gep3","termid":"PBO:0117376"}


id: PBO:0050102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 12","termid":"PBO:0050102"}


id: PBO:0050344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 46","termid":"PBO:0050344"}


id: MONDO:0014470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the TBC1D24 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 65","secondary_identifiers":["GARD:18140","UMLS:C3892048","MEDGEN:856147","OMIM:616044","DOID:0110586"],"synonyms":[{"name":"DFNA65","type":"narrow"},{"name":"TBC1D24 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 65","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 65","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in TBC1D24","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 65","type":"narrow"},{"name":"deafness, autosomal dominant 65","type":"narrow"},{"name":"deafness, autosomal dominant type 65","type":"narrow"}],"termid":"MONDO:0014470","xrefs":{"Monarch":{"xref_id":"0014470"}}}


id: GO:2000453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD8-positive, alpha-beta cytotoxic T cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000450"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:2000452"},{"relation_name":"negatively_regulates","term_name":"CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:0035698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation","termid":"GO:2000453"}


id: MONDO:0007195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bifid nose","termid":"MONDO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bifid nose, autosomal dominant","secondary_identifiers":["OMIM:109740","GARD:15044","UMLS:C2751431","MEDGEN:414016"],"synonyms":[{"name":"bifid nose, autosomal dominant","type":"exact"}],"termid":"MONDO:0007195","xrefs":{"Monarch":{"xref_id":"0007195"}}}


id: MONDO:0016321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary interstitial glycogenosis (PIG) is a rare non-lethal pediatric form of interstitial lung disease (ILD).","definition_xrefs":["Orphanet:217557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease specific to infancy","termid":"MONDO:0017019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary interstitial glycogenosis","secondary_identifiers":["GARD:20516","ICD10CM:J84.842","UMLS:C3161106","icd11.foundation:1386580655","MEDGEN:838075","SCTID:707551007"],"synonyms":[{"name":"PIG","type":"exact"},{"name":"infantile cellular interstitial pneumonitis","type":"exact"},{"name":"pig","type":"exact"}],"termid":"MONDO:0016321","xrefs":{"Monarch":{"xref_id":"0016321"}}}


id: PBO:0041527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 89","termid":"PBO:0041527"}


id: MONDO:0021225
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the uvea.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveal disorder","termid":"MONDO:0002661"},{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"uvea neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:52960","NCIT:C3436","UMLS:C0042162"],"synonyms":[{"name":"neoplasm of the uvea","type":"exact"},{"name":"neoplasm of uvea","type":"exact"},{"name":"tumor of the uvea","type":"exact"},{"name":"tumor of uvea","type":"exact"},{"name":"tumour of the uvea","type":"exact"},{"name":"tumour of uvea","type":"exact"},{"name":"uvea neoplasm (disease)","type":"exact"},{"name":"uvea tumor","type":"exact"},{"name":"uvea tumour","type":"exact"},{"name":"uveal neoplasm","type":"exact"},{"name":"uveal tumor","type":"exact"},{"name":"uveal tumour","type":"exact"}],"termid":"MONDO:0021225","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0021225"}}}


id: PBO:0048475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1, core 2 pseudogene 2","termid":"PBO:0048475"}


id: GO:0097595
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Structure horizontally linking adjacent microribbons of the ventral disc in Giardia species (trophozoite stage). The composition of crossbridges is not fully known yet.","definition_xrefs":["GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc crossbridge","synonyms":[{"name":"crossbridge","type":"broad"},{"name":"ventral disk crossbridge","type":"related"}],"termid":"GO:0097595"}


id: SO:0001174
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence of three nucleotide bases in tRNA which recognizes a codon in mRNA.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"},{"relation_name":"part_of","term_name":"anticodon_loop","termid":"SO:0001173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anticodon","secondary_identifiers":["http://en.wikipedia.org/wiki/Anticodon"],"synonyms":[{"name":"anti-codon","type":"exact"}],"termid":"SO:0001174"}


id: GO:0039689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral genome replication process where the template genome is negative stranded, single stranded RNA ((-)ssRNA).","definition_xrefs":["VZ:1096","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral RNA genome replication","termid":"GO:0039694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative stranded viral RNA replication","synonyms":[{"name":"(-)ss viral RNA replication","type":"exact"}],"termid":"GO:0039689"}


id: MONDO:0024650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteoporosis","termid":"MONDO:0005298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"drug-induced osteoporosis","secondary_identifiers":["ICD9:733.09","icd11.foundation:691296096","MEDGEN:538336","SCTID:14651005","UMLS:C0264115"],"synonyms":[{"name":"drug-induced osteoporosis","type":"exact"}],"termid":"MONDO:0024650","xrefs":{"Monarch":{"xref_id":"0024650"}}}


id: PBO:0054529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1929","termid":"PBO:0054529"}


id: GO:1904603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of advanced glycation end-product receptor activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:16503878","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of advanced glycation end-product receptor activity (obsolete GO:1904603)","synonyms":[{"name":"regulation of AGE receptor activity","type":"exact"},{"name":"regulation of RAGE activity","type":"exact"}],"termid":"GO:1904603"}


id: GO:0015834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peptidoglycan peptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Peptidoglycan peptides are the oligopeptides found in peptidoglycan networks which cross-link the polysaccharide chains.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"peptidoglycan-associated peptide transport","synonyms":[{"name":"murein peptide transport","type":"exact"},{"name":"muropeptide transport","type":"exact"},{"name":"peptidoglycan peptide transport","type":"exact"}],"termid":"GO:0015834"}


id: MONDO:0002667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the gallbladder. It is characterized by the presence of signet ring malignant epithelial cells.","definition_xrefs":["NCIT:C5745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signet ring cell carcinoma","termid":"MONDO:0005092"},{"relation_name":"is_a","term_name":"gallbladder adenocarcinoma","termid":"MONDO:0006215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gallbladder signet ring cell adenocarcinoma","secondary_identifiers":["UMLS:C1333758","MEDGEN:232228","DOID:3499"],"synonyms":[{"name":"gall bladder signet ring cell carcinoma","type":"exact"},{"name":"gallbladder signet Ring cell carcinoma","type":"exact"},{"name":"signet Ring cell carcinoma of gallbladder","type":"exact"},{"name":"signet Ring cell carcinoma of the gallbladder","type":"exact"}],"termid":"MONDO:0002667","xrefs":{"Monarch":{"xref_id":"0002667"}}}


id: GO:0061825
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The F-actin-rich core of an adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell.","definition_xrefs":["PMID:23158496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"podosome","termid":"GO:0002102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"podosome core","termid":"GO:0061825"}


id: PBO:0061574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin 6 beta (pseudogene)","termid":"PBO:0061574"}


id: MONDO:0014349
data:
  {"annotated_genes":["SJAG_01791"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86731],"is_not":false,"summary":null,"term":"MONDO:0014349"}]},"cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the CLP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01791":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1676575","Orphanet:411493","OMIM:615803","UMLS:C5190575","DOID:0060279","GARD:17680"],"synonyms":[{"name":"CLP1 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"CLP1-related pontocerebellar hypoplasia","type":"exact"},{"name":"PCH10","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in CLP1","type":"exact"},{"name":"pontocerebellar hypoplasia, type 10","type":"related"}],"termid":"MONDO:0014349","terms_by_termid":{"MONDO:0014349":null},"xrefs":{"Monarch":{"xref_id":"0014349"}}}


id: PBO:0057571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 766","termid":"PBO:0057571"}


id: MONDO:0009432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypopituitarism, congenital, with central diabetes insipidus","secondary_identifiers":["MEDGEN:340970","MESH:C565477","OMIM:241540","UMLS:C1855800"],"synonyms":[{"name":"hypopituitarism, congenital, with central diabetes insipidus","type":"exact"}],"termid":"MONDO:0009432","xrefs":{"Monarch":{"xref_id":"0009432"}}}


id: _global:has_disposition
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_characteristic","termid":"_global:has_characteristic"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_disposition","secondary_identifiers":["RO:0000091"],"termid":"_global:has_disposition"}


id: PBO:0085284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal NADP-dependent isocitrate dehydrogenase; catalyzes oxidation of isocitrate to alpha-ketoglutarate with the formation of NADP(H+), required for growth on unsaturated fatty acids; IDP3 has a paralog, IDP2, that arose from the whole genome duplication","termid":"PBO:0085284"}


id: PBO:0086156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for pre-rRNA processing; associated with the 90S pre-ribosome and 43S small ribosomal subunit precursor; interacts with U3 snoRNA; binds G-quadruplex (G4) structures in DNA; deletion mutant has synthetic fitness defect with an sgs1 deletion mutant","termid":"PBO:0086156"}


id: MONDO:0800337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"acute tubulointerstitial nephritis","secondary_identifiers":["MEDGEN:334716","UMLS:C1843274"],"synonyms":[{"name":"ATIN","type":"exact"}],"termid":"MONDO:0800337","xrefs":{"Monarch":{"xref_id":"0800337"}}}


id: MONDO:0019065
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0971004"}]},"cv_name":"mondo","definition":"A disorder characterized by the localized or diffuse accumulation of amyloid protein in various anatomic sites. It may be primary, due to clonal plasma cell proliferations; secondary, due to long standing infections, chronic inflammatory disorders, or malignancies; or familial. It may affect the nerves, skin, tongue, joints, heart, liver, spleen, kidneys and adrenal glands.","definition_xrefs":["NCIT:C2868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteostasis deficiencies","termid":"MONDO:0021179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"amyloidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["HP:0011034","ICD9:277.3","ONCOTREE:MIDDA","DOID:9120","MedDRA:10002022","NANDO:2200138","UMLS:C0002726","MESH:D000686","MEDGEN:272","EFO:1001875","icd11.foundation:2078467774","ICD9:277.30","SCTID:17602002","GARD:18676","Orphanet:69"],"synonyms":[{"name":"amyloid","type":"exact"},{"name":"amyloid disease","type":"exact"},{"name":"amyloidoses","type":"exact"},{"name":"amyloidosis","type":"exact"},{"name":"amyloidosis (disease)","type":"exact"}],"termid":"MONDO:0019065","terms_by_termid":{"MONDO:0971004":null},"xrefs":{"Monarch":{"xref_id":"0019065"}}}


id: GO:0006422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. The aspartyl-tRNA synthetase is a class-II synthetase. The activated amino acid is transferred to the 3'-OH group of an aspartic acid accetping tRNA.","definition_xrefs":["GOC:mah","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399","GO:0006520"],"is_obsolete":false,"name":"aspartyl-tRNA aminoacylation","termid":"GO:0006422"}


id: PBO:0076014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 4","termid":"PBO:0076014"}


id: PR:O14198
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- med18 gene.","definition_xrefs":["UniProtKB:O14198","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.05","synonyms":[{"name":"RNA polymerase II mediator complex protein pmc6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-med18","type":"exact"},{"name":"cell separation protein sep11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mediator complex subunit 18 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14198"}


id: MONDO:1010747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in domestic cats in which the cause of the disease is a mutation in the ADAMTS2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, domestic cat","termid":"MONDO:1011494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, dermatosparaxis type, ADAMTS2-related, domestic cat","secondary_identifiers":["OMIA:000328-9685"],"synonyms":[{"name":"dEDS","type":"exact"}],"termid":"MONDO:1010747","xrefs":{"Monarch":{"xref_id":"1010747"}}}


id: MONDO:0006792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Purplish or brownish red discoloration of the skin associated with increase in circulating polyclonal globulins, usually gamma-globulins. This syndrome often occurs on the legs of women aged 20 to 40 years.","definition_xrefs":["MESH:D011694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purpura","termid":"MONDO:0002610"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005570"],"is_obsolete":false,"name":"hyperglobulinemic purpura","secondary_identifiers":["UMLS:C0034151","MEDGEN:19585","DOID:3325","SCTID:402852007"],"termid":"MONDO:0006792","xrefs":{"Monarch":{"xref_id":"0006792"}}}


id: MONDO:0008525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary syringomyelia","termid":"MONDO:0020508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syringomyelia, isolated","secondary_identifiers":["MEDGEN:1622554","OMIM:186700","UMLS:C4538540","MESH:C566084"],"synonyms":[{"name":"syringomyelia, isolated","type":"exact"},{"name":"syringomyelia, noncommunicating isolated","type":"related"}],"termid":"MONDO:0008525","xrefs":{"Monarch":{"xref_id":"0008525"}}}


id: MONDO:8000004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Discitis caused by infection with Salmonella.","definition_xrefs":["PMID:27070599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salmonellosis","termid":"MONDO:0000827"},{"relation_name":"is_a","term_name":"bacterial arthritis","termid":"MONDO:0004471"},{"relation_name":"is_a","term_name":"infectious discitis","termid":"MONDO:8000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salmonella discitis","termid":"MONDO:8000004","xrefs":{"Monarch":{"xref_id":"8000004"}}}


id: PBO:0065672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type T","termid":"PBO:0065672"}


id: PR:Q9UUI1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U6 snRNA-associated Sm-like protein LSm6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11021:SF0","OMA:SCHPO01629","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U6 snRNA-associated Sm-like protein LSm6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.17c","secondary_identifiers":["UniProtKB:Q9UUI1"],"synonyms":[{"name":"Spom972h-LSM6","type":"exact"}],"termid":"PR:Q9UUI1"}


id: PBO:0113208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial HMG-box protein; limits the copy number of mitochondrial DNA (mtDNA), antagonizing HMG-box containing protein Abf2p, a mtDNA packaging factor; localizes to the mitochondrial matrix; contains two HMG-boxes similar to Abf2p; null mutant is viable","termid":"PBO:0113208"}


id: GO:0042730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that solubilizes fibrin in the bloodstream of a multicellular organism, chiefly by the proteolytic action of plasmin.","definition_xrefs":["GOC:jl","PMID:15842654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood coagulation","termid":"GO:0030195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fibrinolysis","secondary_identifiers":["Wikipedia:Fibrinolysis","Reactome:R-HSA-75205"],"termid":"GO:0042730"}


id: GO:1905616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of miRNA-mediated gene silencing by inhibition of translation.","definition_xrefs":["GOC:PARL","PMID:23409027","GOC:TermGenie","GO_REF:0000058","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of miRNA-mediated gene silencing by inhibition of translation (obsolete GO:1905616)","synonyms":[{"name":"regulation of down regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"regulation of down-regulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"regulation of downregulation of translation involved in gene silencing by miRNA","type":"exact"},{"name":"regulation of gene silencing by miRNA, negative regulation of translation","type":"exact"},{"name":"regulation of inhibition of translation involved in gene silencing by miRNA","type":"narrow"},{"name":"regulation of miRNA mediated inhibition of translation","type":"exact"},{"name":"regulation of miRNA-mediated gene silencing, negative regulation of translation","type":"related"},{"name":"regulation of negative regulation of translation involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:1905616"}


id: PBO:0005167
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rik1-Associated Factor","termid":"PBO:0005167"}


id: FYPO:0003210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell has a septum that is in an abnormal location and is not perpendicular to the long axis of the cell. The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum during vegetative growth","termid":"FYPO:0000339"},{"relation_name":"is_a","term_name":"misoriented septum during vegetative growth","termid":"FYPO:0001390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000032","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"mislocalized, misoriented septum","synonyms":[{"name":"abnormal septum localization and orientation","type":"related"},{"name":"abnormal septum location and orientation","type":"exact"},{"name":"abnormal septum position and orientation","type":"exact"},{"name":"abnormal septum positioning and orientation","type":"related"},{"name":"asymmetric, misoriented septum","type":"exact"},{"name":"asymmetrically located, misoriented septum","type":"exact"},{"name":"mislocalised, misoriented septum","type":"exact"},{"name":"mislocalized, misoriented septum during mitotic cell cycle","type":"related"},{"name":"mislocalized, misoriented septum during vegetative growth","type":"exact"},{"name":"misplaced, misoriented septum","type":"exact"}],"termid":"FYPO:0003210"}


id: PBO:0038825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 32","termid":"PBO:0038825"}


id: MONDO:0004349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that involves the retina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal cancer","termid":"MONDO:0003072"},{"relation_name":"is_a","term_name":"eye lymphoma","termid":"MONDO:0004034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"retina lymphoma","secondary_identifiers":["UMLS:C0339556","NCIT:C4365","MEDGEN:83291","ICD9:198.4","SCTID:232075002","DOID:774"],"synonyms":[{"name":"lymphoma of retina","type":"exact"},{"name":"lymphoma of the retina","type":"exact"},{"name":"primary retinal lymphoma","type":"exact"},{"name":"retina lymphoma","type":"exact"},{"name":"retinal lymphoma","type":"exact"}],"termid":"MONDO:0004349","xrefs":{"Monarch":{"xref_id":"0004349"}}}


id: PBO:0074252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 1B3","termid":"PBO:0074252"}


id: PBO:0050415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPDL pseudogene 4","termid":"PBO:0050415"}


id: PBO:0031406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-shmoo_with_long_tip","termid":"PBO:0031406"}


id: MONDO:0017389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetrahydrobiopterin-responsive hyperphenylalaninemia/ phenylketonuria (BH4-responsive hyperphenylalaninemia/ phenylketonuria) is a form of phenylketonuria (PKU), an inborn error of amino acid metabolism, characterized by mild to moderate symptoms of PKU including impaired cognitive function, seizures, and behavioral and developmental disorders, and a marked reduction and normalization of elevated phenylalanine concentrations after oral loading with tetrahydrobiopterin (BH4; sapropterin dihydrochloride), an essential cofactor of phenylalanine hydroxylase.","definition_xrefs":["Orphanet:293284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylketonuria","termid":"MONDO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0004736"],"is_obsolete":false,"name":"tetrahydrobiopterin-responsive hyperphenylalaninemia/phenylketonuria","secondary_identifiers":["NANDO:1200787","MEDGEN:1842546","GARD:21166","NANDO:2201077","UMLS:C5679945"],"synonyms":[{"name":"BH4-responsive HPA/PKU","type":"exact"},{"name":"BH4-responsive hyperphenylalaninemia/phenylketonuria","type":"exact"},{"name":"tetrahydrobiopterin-responsive HPA/PKU","type":"exact"}],"termid":"MONDO:0017389","xrefs":{"Monarch":{"xref_id":"0017389"}}}


id: GO:1990316
data:
  {"annotated_genes":["SJAG_04502","SJAG_04232","SJAG_05017","SJAG_02441","SJAG_01274"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71133,72527,72938,80078,118198],"is_not":false,"summary":null,"term":"GO:1990316"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of Atg1 (or Atg1 homologs e.g. ULK1, ULK2 in mammals) and Atg13 along with other proteins that regulate its function (e.g. Atg17 in yeast or RB1CC1(FIP200) in mammals). This complex has serine/threonine protein kinase activity and is involved in autophagosome formation.","definition_xrefs":["GOC:rb","PMID:19258318","PMID:19211835","PMID:19597335","GOC:bhm","GOC:DOS","PMID:15743910","PMID:22885598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01274":null,"SJAG_02441":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_05017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"Atg1/ULK1 kinase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0070969","GO:0034273"],"synonyms":[{"name":"ATG1 kinase complex","type":"exact"},{"name":"ATG1-ATG13 complex","type":"exact"},{"name":"ATG1/ULK1 signaling complex","type":"exact"},{"name":"Atg1p signalling complex","type":"exact"},{"name":"ULK complex","type":"exact"},{"name":"ULK1 complex","type":"exact"},{"name":"ULK1 signaling complex","type":"exact"},{"name":"ULK1-ATG13-FIP200 complex","type":"exact"},{"name":"ULK1-ATG13-RB1CC1 complex","type":"exact"},{"name":"autophagy-initiation complex","type":"exact"}],"termid":"GO:1990316","terms_by_termid":{"GO:1990316":null}}


id: GO:1905016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of isoleucine-tRNA ligase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:1665486"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of isoleucine-tRNA ligase activity (obsolete GO:1905016)","synonyms":[{"name":"down regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"down regulation of isoleucine translase activity","type":"exact"},{"name":"down regulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"down regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"down regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"down regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"down regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"down regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"down-regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"down-regulation of isoleucine translase activity","type":"exact"},{"name":"down-regulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"down-regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"down-regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"down-regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"down-regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"downregulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"downregulation of isoleucine translase activity","type":"exact"},{"name":"downregulation of isoleucine-tRNA ligase activity","type":"exact"},{"name":"downregulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"downregulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"downregulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"downregulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"downregulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"},{"name":"inhibition of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"narrow"},{"name":"inhibition of isoleucine translase activity","type":"narrow"},{"name":"inhibition of isoleucine-tRNA ligase activity","type":"narrow"},{"name":"inhibition of isoleucine-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of isoleucine-transfer RNA ligase activity","type":"narrow"},{"name":"inhibition of isoleucyl-tRNA synthetase activity","type":"narrow"},{"name":"inhibition of isoleucyl-transfer RNA synthetase activity","type":"narrow"},{"name":"inhibition of isoleucyl-transfer ribonucleate synthetase activity","type":"narrow"},{"name":"negative regulation of L-isoleucine:tRNAIle ligase (AMP-forming)","type":"exact"},{"name":"negative regulation of isoleucine translase activity","type":"exact"},{"name":"negative regulation of isoleucine-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of isoleucine-transfer RNA ligase activity","type":"exact"},{"name":"negative regulation of isoleucyl-tRNA synthetase activity","type":"exact"},{"name":"negative regulation of isoleucyl-transfer RNA synthetase activity","type":"exact"},{"name":"negative regulation of isoleucyl-transfer ribonucleate synthetase activity","type":"exact"}],"termid":"GO:1905016"}


id: PBO:0109380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 11","termid":"PBO:0109380"}


id: GO:0075315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of basidium development, a process that leads to the formation of basidium, a small, specialized club-shaped structure typically bearing four basidiospores at the tips of minute projections. The basidium is unique to basidiomycetes and distinguishes them from other kinds of fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of basidium development","termid":"GO:0075314"},{"relation_name":"positively_regulates","term_name":"basidium development","termid":"GO:0075313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of basidium development","termid":"GO:0075315"}


id: PBO:0005901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tyrosine, mitochondrial","termid":"PBO:0005901"}


id: GO:0160163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + S-nitrosoglutathione = NADP+ + S-(hydroxysulfenamide)glutathione.","definition_xrefs":["RHEA:63500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"S-nitrosoglutathione reductase (NADPH) activity","termid":"GO:0160163"}


id: PBO:0053969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1280","termid":"PBO:0053969"}


id: PBO:0077910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 1","termid":"PBO:0077910"}


id: GO:0070991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain 2,3-saturated fatty acyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = a medium-chain trans-(2E)-enoyl-CoA + reduced [electron-transfer flavoprotein]. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["RHEA:14477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase activity","termid":"GO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"medium-chain fatty acyl-CoA dehydrogenase activity","secondary_identifiers":["EC:1.3.8.7","MetaCyc:RXN-11734"],"synonyms":[{"name":"MCAD activity","type":"exact"}],"termid":"GO:0070991"}


id: PBO:0070310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 16","termid":"PBO:0070310"}


id: PBO:0047061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 120A opposite strand","termid":"PBO:0047061"}


id: PBO:0075072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 121B","termid":"PBO:0075072"}


id: PBO:0078802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 19-2","termid":"PBO:0078802"}


id: GO:0100036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates purine nucleotide biosynthetic process.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of purine nucleotide biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100036)","termid":"GO:0100036"}


id: PR:O74731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-dihydrouridine synthase 2-like that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02719","PRO:DNx","PANTHER:PTHR11082:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-dihydrouridine(20) synthase [NAD(P)+] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.06","secondary_identifiers":["UniProtKB:O74731"],"synonyms":[{"name":"Spom972h-DUS2","type":"exact"},{"name":"tRNA-dihydrouridine synthase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74731"}


id: GO:0052654
data:
  {"annotated_genes":["SJAG_04149"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110810],"is_not":false,"summary":null,"term":"GO:0052654"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-leucine = 4-methyl-2-oxopentanoate + L-glutamatic acid.","definition_xrefs":["RHEA:18321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched-chain-amino-acid transaminase activity","termid":"GO:0004084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04149":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"L-leucine-2-oxoglutarate transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:BRANCHED-CHAINAMINOTRANSFERLEU-RXN","KEGG_REACTION:R01090"],"synonyms":[{"name":"L-leucine aminotransferase activity","type":"exact"}],"termid":"GO:0052654","terms_by_termid":{"GO:0052654":null}}


id: PBO:0030208
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell","termid":"PBO:0030208"}


id: PBO:0034132
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_modifier","termid":"PBO:0034132"}


id: GO:0052653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3',5'-cyclic diguanylic acid, a cyclic purine dinucleotide in which the base groups are guanine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"cyclic nucleotide biosynthetic process","termid":"GO:0009190"},{"relation_name":"is_a","term_name":"cyclic purine nucleotide metabolic process","termid":"GO:0052652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"3',5'-cyclic diguanylic acid metabolic process","synonyms":[{"name":"3',5'-cyclic diguanylic acid metabolism","type":"exact"},{"name":"cdiGMP metabolic process","type":"exact"},{"name":"cdiGMP metabolism","type":"exact"},{"name":"cyclic diguanylate metabolic process","type":"exact"},{"name":"cyclic diguanylate metabolism","type":"exact"}],"termid":"GO:0052653"}


id: PBO:0077050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THRB antisense RNA 1","termid":"PBO:0077050"}


id: FYPO:0000203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which ergosterol biosynthesis is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal ergosterol biosynthetic process","synonyms":[{"name":"abnormal ergosterol biosynthesis","type":"exact"},{"name":"abnormal ergosterol biosynthetic process during mitotic cell cycle","type":"related"},{"name":"abnormal ergosterol biosynthetic process during vegetative growth","type":"exact"}],"termid":"FYPO:0000203"}


id: GO:0048472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-threonine + H+ = (R)-1-aminopropan-2-yl phosphate + CO2.","definition_xrefs":["RHEA:11492","EC:4.1.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"threonine-phosphate decarboxylase activity","secondary_identifiers":["MetaCyc:4.1.1.81-RXN","KEGG_REACTION:R06530"],"synonyms":[{"name":"CobD","type":"related"},{"name":"L-threonine O-3-phosphate carboxy-lyase [(R)-1-aminopropan-2-yl-phosphate-forming]","type":"related"},{"name":"L-threonine O-3-phosphate carboxy-lyase activity","type":"related"},{"name":"L-threonine-O-3-phosphate decarboxylase activity","type":"exact"}],"termid":"GO:0048472"}


id: GO:0002090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor internalization.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor-mediated endocytosis","termid":"GO:0048259"},{"relation_name":"regulates","term_name":"receptor internalization","termid":"GO:0031623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of receptor internalization","termid":"GO:0002090"}


id: MONDO:0015617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary gastro-esophageal disease (obsolete MONDO:0015617)","secondary_identifiers":["Orphanet:165658"],"synonyms":[{"name":"genetic gastro-esophageal disease","type":"exact"}],"termid":"MONDO:0015617","xrefs":{"Monarch":{"xref_id":"0015617"}}}


id: MONDO:0011246
data:
  {"annotated_genes":["SJAG_01918"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86680],"is_not":false,"summary":null,"term":"MONDO:0011246"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01918":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005066","MONDO:0002525","MONDO:0005336"],"is_obsolete":false,"name":"megaconial type congenital muscular dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1865233","DOID:0110632","MESH:C566527","GARD:10317","Orphanet:280671","MEDGEN:355943","OMIM:602541"],"synonyms":[{"name":"MDCMC","type":"related"},{"name":"congenital megaconial myopathy","type":"exact"},{"name":"congenital muscular dystrophy due to phosphatidylcholine biosynthesis defect","type":"exact"},{"name":"congenital muscular dystrophy with mitochondrial structural abnormalities","type":"exact"},{"name":"megaconial congenital muscular dystrophy","type":"exact"},{"name":"megaconial congénital muscular dystrophy","type":"related"},{"name":"megaconial type congenital muscular dystrophy","type":"exact"},{"name":"muscular dystrophy, congenital, megaconial type","type":"related"},{"name":"muscular dystrophy, congenital, with mitochondrial structural abnormalities","type":"related"}],"termid":"MONDO:0011246","terms_by_termid":{"MONDO:0011246":null},"xrefs":{"Monarch":{"xref_id":"0011246"}}}


id: PBO:0065284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich and Gla domain 4","termid":"PBO:0065284"}


id: PR:O94251
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pop7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleases P/MRP protein subunit POP7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.01c","synonyms":[{"name":"RNA-processing protein POP7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pop7","type":"exact"}],"termid":"PR:O94251"}


id: GO:0072700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bismuth (Bi) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bismuth","synonyms":[{"name":"response to bismuth ion","type":"exact"}],"termid":"GO:0072700"}


id: PBO:0018136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoprotein phosphatase involved in unfolded protein response (predicted)","termid":"PBO:0018136"}


id: MONDO:0002788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A craniopharyngioma composed of sheets of squamous epithelium which separate to form pseudopapillae. This variant typically lacks nuclear palisading, wet keratin, calcification, and cholesterol deposits. Clinically, endocrine deficiencies are more often associated with papillary craniopharyngioma than with the adamantinomatous type. (Adapted from WHO)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniopharyngioma","termid":"MONDO:0018907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary craniopharyngioma","secondary_identifiers":["ICDO:9352/1","MEDGEN:98125","DOID:3847","UMLS:C0431128","NCIT:C4725"],"synonyms":[{"name":"craniopharyngioma, papillary","type":"exact"},{"name":"craniopharyngioma, papillary (morphologic abnormality)","type":"exact"},{"name":"papillary Rathke pouch neoplasm","type":"exact"},{"name":"papillary Rathke's pouch neoplasm","type":"exact"},{"name":"papillary Rathke's pouch tumor","type":"exact"},{"name":"papillary Rathke's pouch tumour","type":"exact"},{"name":"papillary craniopharyngioma (morphologic abnormality)","type":"exact"},{"name":"papillary neoplasm of Rathke's pouch","type":"exact"},{"name":"papillary tumor of Rathke's pouch","type":"exact"},{"name":"papillary tumour of Rathke's pouch","type":"exact"}],"termid":"MONDO:0002788","xrefs":{"Monarch":{"xref_id":"0002788"}}}


id: MONDO:0044274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Individuals with high altitude adaptation hemoglobin can survive in extremely hypoxic conditions without an increase in hematocrit or the development of erythrocytosis or polycythemia vera (summary by {3:Lorenzo et al., 2014}).","definition_xrefs":["OMIM:609070"],"gene_count":0,"genotype_count":0,"name":"obsolete hemoglobin, high altitude adaptation (obsolete MONDO:0044274)","synonyms":[{"name":"HALAH","type":"related"},{"name":"HEMOGLOBIN, high altitude adaptation","type":"related"},{"name":"Hemoglobin, high oxygen saturation of","type":"related"},{"name":"hemoglobin, high altitude adaptation","type":"exact"}],"termid":"MONDO:0044274","xrefs":{"Monarch":{"xref_id":"0044274"}}}


id: GO:2000197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ribonucleoprotein complex localization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"ribonucleoprotein complex localization","termid":"GO:0071166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ribonucleoprotein complex localization","synonyms":[{"name":"regulation of RNP localization","type":"exact"},{"name":"regulation of cellular ribonucleoprotein complex localization","type":"exact"},{"name":"regulation of establishment and maintenance of ribonucleoprotein complex localization","type":"exact"},{"name":"regulation of ribonucleoprotein complex localisation","type":"exact"}],"termid":"GO:2000197"}


id: MONDO:0859271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"glycosylphosphatidylinositol biosynthesis defect 25","secondary_identifiers":["MEDGEN:1823964","UMLS:C5774191","OMIM:619985"],"termid":"MONDO:0859271","xrefs":{"Monarch":{"xref_id":"0859271"}}}


id: PBO:0077747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOG array regulator of axonemal microtubules 2","termid":"PBO:0077747"}


id: PBO:0110369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS8 signaling adaptor L3","termid":"PBO:0110369"}


id: PR:O13767
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A5.05c gene.","definition_xrefs":["UniProtKB:O13767","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17A5.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.05c","synonyms":[{"name":"Spom972h-SPAC17A5.05c","type":"exact"}],"termid":"PR:O13767"}


id: PBO:0041606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CA15 pseudogene 3","termid":"PBO:0041606"}


id: PBO:0070370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY5 pseudogene 8","termid":"PBO:0070370"}


id: GO:0008201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to heparin, a member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan binding","termid":"GO:0005539"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"heparin binding","synonyms":[{"name":"heparan sulfate binding","type":"related"}],"termid":"GO:0008201"}


id: GO:0019164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + CoA + 2 oxidized ferredoxin = acetyl-CoA + CO2 + 2 reduced ferredoxin + 2 H+.","definition_xrefs":["KEGG_REACTION:R01196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyruvate synthase activity","secondary_identifiers":["MetaCyc:PYRUFLAVREDUCT-RXN","GO:0018696","EC:1.2.7.1","RHEA:12765"],"synonyms":[{"name":"PFOR","type":"exact"},{"name":"pyruvate oxidoreductase activity","type":"related"},{"name":"pyruvate synthetase activity","type":"related"},{"name":"pyruvate-ferredoxin reductase activity","type":"exact"},{"name":"pyruvate:ferredoxin 2-oxidoreductase (CoA-acetylating)","type":"related"},{"name":"pyruvate:ferredoxin oxidoreductase activity","type":"related"},{"name":"pyruvic-ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0019164"}


id: PBO:0003558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-A, phosphatidylinositol N-acetylglucosaminyltransferase subunit Gpi3 (predicted)","termid":"PBO:0003558"}


id: PBO:0069310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 566, pseudogene","termid":"PBO:0069310"}


id: GO:0007596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers.","definition_xrefs":["PMID:30700128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemostasis","termid":"GO:0007599"},{"relation_name":"is_a","term_name":"coagulation","termid":"GO:0050817"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood coagulation","secondary_identifiers":["Wikipedia:Coagulation","Reactome:R-HSA-109582"],"synonyms":[{"name":"blood clotting","type":"exact"}],"termid":"GO:0007596"}


id: PBO:0077805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOX high mobility group box family member 3","termid":"PBO:0077805"}


id: GO:2000367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of acrosomal vesicle exocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"},{"relation_name":"regulates","term_name":"acrosomal vesicle exocytosis","termid":"GO:0060478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of acrosomal vesicle exocytosis","synonyms":[{"name":"regulation of acrosomal granule exocytosis","type":"related"},{"name":"regulation of acrosome exocytosis","type":"exact"}],"termid":"GO:2000367"}


id: PBO:0034474
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_protein_localization_to_double-strand_break_site","termid":"PBO:0034474"}


id: PBO:0045206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C2","termid":"PBO:0045206"}


id: GO:0033236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: an 11-beta-hydroxysteroid + NAD+ = an 11-oxosteroid + NADH + H+.","definition_xrefs":["PMID:15761036"],"gene_count":0,"genotype_count":0,"name":"obsolete 11-beta-hydroxysteroid dehydrogenase (NAD+) activity (obsolete GO:0033236)","synonyms":[{"name":"11-beta-hydroxysteroid dehydrogenase (NAD+) activity","type":"exact"}],"termid":"GO:0033236"}


id: PBO:0076036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 33","termid":"PBO:0076036"}


id: PBO:0072965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1A member 1","termid":"PBO:0072965"}


id: PBO:0056932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mirror-image polydactyly 1","termid":"PBO:0056932"}


id: GO:0019389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving glucuronosides, any compound formed by combination in glycosidic linkage of a hydroxy compound with the anomeric carbon atom of a glucuronate.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete glucuronoside metabolic process (obsolete GO:0019389)","synonyms":[{"name":"glucuronide metabolic process","type":"exact"},{"name":"glucuronide metabolism","type":"exact"},{"name":"glucuronoside metabolism","type":"exact"}],"termid":"GO:0019389"}


id: MONDO:0000122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete facial paresis, hereditary congenital (obsolete MONDO:0000122)","termid":"MONDO:0000122","xrefs":{"Monarch":{"xref_id":"0000122"}}}


id: PR:O94323
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ectonucleotide pyrophosphatase/phosphodiesterase family member 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized pyrophosphatase/phosphodiesterase C725.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.05c","secondary_identifiers":["UniProtKB:O94323"],"synonyms":[{"name":"Spom972h-ENPP5","type":"exact"}],"termid":"PR:O94323"}


id: PBO:0078426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 3-1","termid":"PBO:0078426"}


id: PBO:0052715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 7","termid":"PBO:0052715"}


id: MONDO:0017569
data:
  {"annotated_genes":["SJAG_00120","SJAG_00660","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87562,87563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009053"},{"annotations":[86958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013755"}]},"cv_name":"mondo","definition":"A rare autosomal recessive genetic disorder characterized by facial dysmorphism (down-slanting palpebral fissures, a broad flat nasal bridge and a small mouth) with a progeroid appearance, large and late-closing fontanel, cutis laxa (CL), joint hyperlaxity, athetoid movements and hyperreflexia, pre- and postnatal growth retardation, intellectual deficit and developmental delay, and corneal clouding and cataract.","definition_xrefs":["Orphanet:2962"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare hereditary metabolic disease with peripheral neuropathy (obsolete MONDO:0016133)","termid":"MONDO:0016133"},{"relation_name":"excluded_subClassOf","term_name":"cutis laxa","termid":"MONDO:0016175"},{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of proline metabolism","termid":"MONDO:0017355"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neurometabolic disease (obsolete MONDO:0019058)","termid":"MONDO:0019058"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic corneal dystrophy (obsolete MONDO:0020215)","termid":"MONDO:0020215"},{"relation_name":"excluded_subClassOf","term_name":"obsolete cataract associated with a metabolic disease (obsolete MONDO:0020228)","termid":"MONDO:0020228"},{"relation_name":"excluded_subClassOf","term_name":"obsolete metabolic disease with cataract (obsolete MONDO:0020280)","termid":"MONDO:0020280"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"premature aging syndrome","termid":"MONDO:0019303"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019303"],"is_obsolete":false,"name":"de Barsy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C535990","SCTID:238826008","DOID:0070143","GARD:49","PMID:18388779","NORD:1034","UMLS:C0268354","MEDGEN:82794"],"synonyms":[{"name":"De Barsy syndrome","type":"exact"},{"name":"autosomal recessive cutis laxa type III","type":"related"},{"name":"corneal clouding, cutis laxa and intellectual disability","type":"related"},{"name":"corneal clouding, cutis laxa and mental retardation","type":"related"},{"name":"cutis laxa growth deficiency syndrome","type":"related"},{"name":"cutis laxa-corneal clouding-intellectual disability syndrome","type":"exact"},{"name":"progeroid syndrome of de Barsy","type":"related"},{"name":"progeroid syndrome, De Barsy type","type":"exact"},{"name":"progeroid syndrome, de Barsy type","type":"related"}],"termid":"MONDO:0017569","terms_by_termid":{"MONDO:0009053":null,"MONDO:0013755":null},"xrefs":{"Monarch":{"xref_id":"0017569"}}}


id: PBO:0076733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 1 pseudogene 2","termid":"PBO:0076733"}


id: PBO:0057428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550a-1","termid":"PBO:0057428"}


id: PBO:0085424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pleiotropic negative transcriptional regulator; involved in Ras-CAMP and lysine biosynthetic pathways and nitrogen regulation; involved in retrograde (RTG) mitochondria-to-nucleus signaling","termid":"PBO:0085424"}


id: GO:0033795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [thioredoxin]-disulfide + acetyl phosphate + H2O + trimethylamine = [thioredoxin]-dithiol + glycine betaine + H+ + phosphate.","definition_xrefs":["RHEA:11848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor","termid":"GO:0050485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"betaine reductase activity","secondary_identifiers":["EC:1.21.4.4"],"synonyms":[{"name":"acetyl-phosphate trimethylamine:thioredoxin disulfide oxidoreductase (N,N,N-trimethylglycine-forming) activity","type":"related"}],"termid":"GO:0033795"}


id: PBO:0047235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member G","termid":"PBO:0047235"}


id: FYPO:0000905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the ubiquitination of one or more specific proteins, or of specific protein sites, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"},{"relation_name":"is_a","term_name":"abnormal protein ubiquitination","termid":"FYPO:0006977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein ubiquitination during vegetative growth","synonyms":[{"name":"abnormal protein ubiquitination during mitotic cell cycle","type":"related"},{"name":"abnormal protein ubiquitinylation during vegetative growth","type":"related"},{"name":"abnormal protein ubiquitylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000905"}


id: PBO:0055986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat transmembrane neuronal 4","termid":"PBO:0055986"}


id: RO:HOM0000029
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Heterochronous homology that is produced by a retention in adults of a species of traits previously seen only in juveniles.","definition_xrefs":["ISBN:978-0674639416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_heterochronous_homology_relationship_with","termid":"RO:HOM0000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_paedomorphorsis_relationship_with","synonyms":[{"name":"juvenification","type":"exact"},{"name":"pedomorphosis","type":"exact"}],"termid":"RO:HOM0000029"}


id: GO:0008475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[collagen] + 2-oxoglutarate + O2 = (5R)-5-hydroxy-L-lysyl-[collagen] + succinate + CO2.","definition_xrefs":["RHEA:16569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"procollagen-lysine 5-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-1981104","EC:1.14.11.4","MetaCyc:PROCOLLAGEN-LYSINE-5-DIOXYGENASE-RXN"],"synonyms":[{"name":"collagen lysine hydroxylase activity","type":"related"},{"name":"lysine hydroxylase activity","type":"broad"},{"name":"lysine,2-oxoglutarate 5-dioxygenase activity","type":"broad"},{"name":"lysine-2-oxoglutarate dioxygenase activity","type":"broad"},{"name":"lysyl hydroxylase activity","type":"broad"},{"name":"lysylprotocollagen dioxygenase activity","type":"related"},{"name":"procollagen-L-lysine,2-oxoglutarate:oxygen oxidoreductase (5-hydroxylating)","type":"related"},{"name":"procollagen-lysine,2-oxoglutarate 5-dioxygenase activity","type":"related"},{"name":"protocollagen lysine dioxygenase activity","type":"related"},{"name":"protocollagen lysine hydroxylase activity","type":"related"},{"name":"protocollagen lysyl hydroxylase activity","type":"related"}],"termid":"GO:0008475"}


id: PBO:0066923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 225","termid":"PBO:0066923"}


id: MONDO:0017181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conditions in which the primary symptom is headache and the headache cannot be attributed to any known causes.","definition_xrefs":["MESH:D051270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"headache disorder","termid":"MONDO:0021146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypnic headache","secondary_identifiers":["GARD:10796","Orphanet:276429","MEDGEN:156012","HP:0012459","ICD9:339.81","SCTID:122711000119109","UMLS:C0752150","icd11.foundation:468065426"],"synonyms":[{"name":"hypnic headache","type":"exact"},{"name":"hypnic headache (disease)","type":"exact"}],"termid":"MONDO:0017181","xrefs":{"Monarch":{"xref_id":"0017181"}}}


id: PBO:0029260
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_leucine_import","termid":"PBO:0029260"}


id: MONDO:0016965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 15q duplication is a chromosome abnormality that occurs when an extra (duplicate) copy of the genetic material located on the long arm (q) of chromosome 15 is present in each cell. The severity of the condition and the associated signs and symptoms vary based on the size and location of the duplication and which genes are involved. Common features shared by many people with this duplication include developmental delay; intellectual disability; hypotonia (low muscle tone); seizures ; high and/or cleft palate (roof of the mouth); scoliosis ; slow growth; communication difficulties; behavioral problems; and distinctive facial features. Most cases are not inherited, although affected people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 15","secondary_identifiers":["GARD:5314","MEDGEN:167076","Orphanet:262950","MESH:C538040","UMLS:C0795858"],"synonyms":[{"name":"15q duplication","type":"related"},{"name":"15q trisomy","type":"related"},{"name":"Duplication 15q","type":"related"},{"name":"chromosome 15q duplication","type":"related"},{"name":"partial duplication of chromosome 15q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 15","type":"exact"},{"name":"partial trisomy 15q","type":"related"},{"name":"partial trisomy of chromosome 15q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 15","type":"exact"},{"name":"trisomy 15q","type":"related"}],"termid":"MONDO:0016965","xrefs":{"Monarch":{"xref_id":"0016965"}}}


id: MONDO:0013895
data:
  {"annotated_genes":["SJAG_04092","SJAG_03484"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86473,86474],"is_not":false,"summary":null,"term":"MONDO:0013895"}]},"cv_name":"mondo","definition":"Any Adams-Oliver syndrome in which the cause of the disease is a mutation in the RBPJ gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Adams-Oliver syndrome","termid":"MONDO:0007034"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03484":null,"SJAG_04092":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Adams-Oliver syndrome 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614814","UMLS:C3553748","MEDGEN:766662","GARD:15842"],"synonyms":[{"name":"AOS3","type":"related"},{"name":"Adams-Oliver syndrome 3","type":"exact"},{"name":"Adams-Oliver syndrome caused by mutation in RBPJ","type":"exact"},{"name":"Adams-Oliver syndrome type 3","type":"exact"},{"name":"RBPJ Adams-Oliver syndrome","type":"exact"}],"termid":"MONDO:0013895","terms_by_termid":{"MONDO:0013895":null},"xrefs":{"Monarch":{"xref_id":"0013895"}}}


id: PBO:0055352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2781","termid":"PBO:0055352"}


id: PBO:0057877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3181","termid":"PBO:0057877"}


id: PBO:0028131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_deacetylase_activity","termid":"PBO:0028131"}


id: PBO:0036077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stubby_vegetative_cell","termid":"PBO:0036077"}


id: GO:0008752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FMNH2 + NAD(P)+ = FMN + NAD(P)H + H+. This reaction can utilize NADH and NADPH with similar reaction rates.","definition_xrefs":["EC:1.5.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"FMN reductase [NAD(P)H] activity","synonyms":[{"name":"FMN reductase activity","type":"broad"},{"name":"NAD(P)H dehydrogenase (FMN) activity","type":"exact"},{"name":"NAD(P)H-dependent FMN reductase activity","type":"related"},{"name":"flavin mononucleotide reductase activity","type":"related"}],"termid":"GO:0008752"}


id: PBO:0050123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 33","termid":"PBO:0050123"}


id: GO:0036095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of invasive growth as a result of deprivation of glucose, by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:jh","PMID:14668363"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of invasive growth in response to glucose limitation by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0036095)","synonyms":[{"name":"transcriptional activation of genes involved in invasive growth","type":"related"}],"termid":"GO:0036095"}


id: FYPO:0006054
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119719,119722],"is_not":false,"summary":null,"term":"FYPO:0006054"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of lipid droplet formation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"lipid droplets present in decreased numbers","termid":"FYPO:0002552"},{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased lipid droplet formation","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_02763"],"single_locus_genotype_uniquenames":["ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"decreased lipid droplet assembly","type":"exact"},{"name":"decreased lipid particle formation","type":"exact"},{"name":"reduced lipid droplet formation","type":"exact"}],"termid":"FYPO:0006054","terms_by_termid":{"FYPO:0006054":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0078489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 8-1","termid":"PBO:0078489"}


id: FYPO:0006842
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosomes containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) are assembled over a normal (i.e. indistinguishable from wild type) portion of the centromeric region of the chromosome. CENP-A-containing nucleosomes are assembled into chromatin around centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["PomBase:mah","GO:0000729","PMID:28904333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal spatial extent of CENP-A containing nucleosome assembly","synonyms":[{"name":"normal extent of CENP-A containing nucleosome","type":"related"},{"name":"normal spatial extent of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"normal spatial extent of CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"normal spatial extent of CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"normal spatial extent of CENP-A deposition","type":"related"},{"name":"normal spatial extent of CENP-A loading","type":"related"},{"name":"normal spatial extent of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"normal spatial extent of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"normal spatial extent of centromere-specific histone exchange","type":"exact"},{"name":"normal spatial extent of centromere-specific nucleosome assembly","type":"exact"},{"name":"normal spatial extent of centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"FYPO:0006842"}


id: MOD:02035
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex Hex(6) HexNAc(3)","definition_xrefs":["PubMed:33135055","Unimod:1509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"dHex1Hex6HexNAc3 N4-glycosylated asparagine","synonyms":[{"name":"dHex Hex(6) HexNAc(3)","type":"related"}],"termid":"MOD:02035"}


id: PBO:0062833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit 4, non-catalytic","termid":"PBO:0062833"}


id: GO:0062238
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A DNA-binding ribonucleoprotein complex that contains a lncRNA complementary to the bound chromosomal locus and is involved in the tethering homologous chromosomes together during chromosome pairing at meiotic prophase I.","definition_xrefs":["PMID:22582262","PMID:31811152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Smp focus","synonyms":[{"name":"Smp dot","type":"exact"}],"termid":"GO:0062238"}


id: PBO:0055378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2808","termid":"PBO:0055378"}


id: GO:0047922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dihydroxybenzoate + O2 = 3-maleylpyruvate + H+.","definition_xrefs":["RHEA:18237","EC:1.13.11.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"gentisate 1,2-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R02656","MetaCyc:GENTISATE-12-DIOXYGENASE-RXN"],"synonyms":[{"name":"2,5-dihydroxybenzoate dioxygenase activity","type":"related"},{"name":"gentisate dioxygenase activity","type":"related"},{"name":"gentisate oxygenase activity","type":"related"},{"name":"gentisate:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"},{"name":"gentisic acid oxidase activity","type":"related"}],"termid":"GO:0047922"}


id: GO:0036491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of translation initiation, as a result of endoplasmic reticulum stress.","definition_xrefs":["PMID:16835242","GOC:PARL","GOC:bf","PMID:14676213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation in response to endoplasmic reticulum stress","termid":"GO:0036490"},{"relation_name":"is_a","term_name":"regulation of translational initiation in response to stress","termid":"GO:0043558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translation initiation in response to endoplasmic reticulum stress","synonyms":[{"name":"regulation of translation initiation in response to ER stress","type":"exact"}],"termid":"GO:0036491"}


id: GO:0055025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of cardiac muscle tissue development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of striated muscle tissue development","termid":"GO:0045844"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue development","termid":"GO:0055024"},{"relation_name":"positively_regulates","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle tissue development","synonyms":[{"name":"activation of cardiac muscle development","type":"narrow"},{"name":"positive regulation of heart muscle development","type":"exact"},{"name":"stimulation of cardiac muscle development","type":"narrow"},{"name":"up regulation of cardiac muscle development","type":"exact"},{"name":"up-regulation of cardiac muscle development","type":"exact"},{"name":"upregulation of cardiac muscle development","type":"exact"}],"termid":"GO:0055025"}


id: PBO:0044701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 X-linked","termid":"PBO:0044701"}


id: GO:0072582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 17-beta-hydroxysteroid + NADP+ = a 17-oxosteroid + NADPH + H+.","definition_xrefs":["PMID:17074428","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"17-beta-hydroxysteroid dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:69284"],"termid":"GO:0072582"}


id: PBO:0056710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 pseudogene 2","termid":"PBO:0056710"}


id: GO:0004244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the maturation of mitochondrial precursor proteins delivered to the intermembrane space.","definition_xrefs":["PMID:12191769"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial inner membrane peptidase activity (obsolete GO:0004244)","synonyms":[{"name":"IMP","type":"broad"},{"name":"mitochondrial inner membrane peptidase activity","type":"exact"}],"termid":"GO:0004244"}


id: GO:0016707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a gibberellin + 2-oxoglutarate + O2 = a 3-beta-hydroxy-gibberellin + succinate + CO2.","definition_xrefs":["EC:1.14.11.15","PMID:32652020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"gibberellin 3-beta-dioxygenase activity","secondary_identifiers":["RHEA:10104","MetaCyc:RXN1F-170"],"synonyms":[{"name":"(gibberellin-20),2-oxoglutarate:oxygen oxidoreductase (3beta-hydroxylating)","type":"narrow"},{"name":"(gibberrellin-20),2-oxoglutarate: oxygen oxidoreductase (3beta-hydroxylating)","type":"narrow"},{"name":"gibberellin 3-beta-hydroxylase activity","type":"related"},{"name":"gibberellin 3beta-dioxygenase activity","type":"related"},{"name":"gibberellin 3beta-hydroxylase activity","type":"related"}],"termid":"GO:0016707"}


id: FYPO:0003391
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ubiquinone binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal ubiquinone binding","synonyms":[{"name":"abnormal coenzyme Q binding","type":"exact"}],"termid":"FYPO:0003391"}


id: PBO:0065470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, non-ATPase, 10 pseudogene 1","termid":"PBO:0065470"}


id: MONDO:0007012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Creutzfeldt-Jakob disease that is most commonly contracted after consuming meat from an animal suffering from bovine spongiform encephalopathy.","definition_xrefs":["NCIT:C128438"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"prion disease","termid":"MONDO:0005429"},{"relation_name":"is_a","term_name":"acquired Creutzfeldt-Jakob disease","termid":"MONDO:0018686"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant Creutzfeldt-Jakob disease","secondary_identifiers":["SCTID:304603007","EFO:1001233","MESH:D016643","GARD:9550","DOID:5435","ICD10CM:A81.01","icd11.foundation:378572696","MedDRA:10064199","MEDGEN:138163","NCIT:C26802","ICD9:046.11","Orphanet:576370","UMLS:C0376329","NANDO:1200194"],"synonyms":[{"name":"vCJD","type":"exact"}],"termid":"MONDO:0007012","xrefs":{"Monarch":{"xref_id":"0007012"}}}


id: PR:O74449
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC16C4.04 gene.","definition_xrefs":["UniProtKB:O74449","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C4.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.04","synonyms":[{"name":"Spom972h-SPCC16C4.04","type":"exact"}],"termid":"PR:O74449"}


id: GO:0098786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the disassembly of a biofilm matrix.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix disassembly","termid":"GO:0022617"},{"relation_name":"is_a","term_name":"biofilm matrix organization","termid":"GO:0098784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biofilm matrix disassembly","termid":"GO:0098786"}


id: PR:Q09669
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alcohol dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.06c","secondary_identifiers":["UniProtKB:Q09669"],"synonyms":[{"name":"Spom972h-yiaY","type":"exact"},{"name":"alcohol dehydrogenase IV (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09669"}


id: PBO:0005129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylyl cyclase-associated protein Cap1","termid":"PBO:0005129"}


id: PBO:0043542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin pseudogene 1","termid":"PBO:0043542"}


id: GO:0042148
data:
  {"annotated_genes":["SJAG_03221","SJAG_00757","SJAG_01708","SJAG_01410","SJAG_04950","SJAG_03751","SJAG_02708","SJAG_02267"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72632,97245],"is_not":false,"summary":null,"term":"GO:0042148"},{"annotations":[110676,108027,99391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000708"},{"annotations":[88805,100889,79239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010774"}]},"cv_name":"biological_process","definition":"The process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["PMID:10357855","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"DNA strand invasion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"D-loop biosynthesis","type":"related"},{"name":"D-loop formation","type":"related"},{"name":"Rad51-mediated strand invasion","type":"exact"},{"name":"displacement loop biosynthesis","type":"related"},{"name":"displacement loop formation","type":"related"},{"name":"strand invasion","type":"exact"}],"termid":"GO:0042148","terms_by_termid":{"GO:0000708":null,"GO:0010774":null,"GO:0042148":null}}


id: GO:0072676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a lymphocyte within or between different tissues and organs of the body.","definition_xrefs":["CL:0000542","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte migration","termid":"GO:0072676"}


id: PBO:0077919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 10","termid":"PBO:0077919"}


id: PBO:0028750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_spindle_pole_body","termid":"PBO:0028750"}


id: MONDO:0020596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"mucinous neoplasm","termid":"MONDO:0024338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"mucin-producing carcinoma","secondary_identifiers":["NCIT:C27825","MEDGEN:87225","UMLS:C0334368"],"synonyms":[{"name":"mucin-producing carcinoma","type":"exact"}],"termid":"MONDO:0020596","xrefs":{"Monarch":{"xref_id":"0020596"}}}


id: GO:0051015
data:
  {"annotated_genes":["SJAG_01268","SJAG_02245","SJAG_04001","SJAG_03088","SJAG_00152","SJAG_01384","SJAG_04100","SJAG_04621","SJAG_01894","SJAG_04703","SJAG_01993","SJAG_00677","SJAG_02075","SJAG_00938","SJAG_03025","SJAG_02700","SJAG_03086","SJAG_03380","SJAG_02396","SJAG_03703","SJAG_01943","SJAG_00970","SJAG_03011","SJAG_02566","SJAG_02431","SJAG_01964","SJAG_00279","SJAG_04498"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70364,70374,70755,71321,71913,73782,74761,75119,75291,75940,76054,76397,76700,76781,76967,77003,77773,78090,78166,78498,79320,79375,79502,79966,80050,80304,80535],"is_not":false,"summary":null,"term":"GO:0051015"},{"annotations":[77567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003786"}]},"cv_name":"molecular_function","definition":"Binding to an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin binding","termid":"GO:0003779"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00152":null,"SJAG_00279":null,"SJAG_00677":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02075":null,"SJAG_02245":null,"SJAG_02396":null,"SJAG_02431":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03380":null,"SJAG_03703":null,"SJAG_04001":null,"SJAG_04100":null,"SJAG_04498":null,"SJAG_04621":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003779"}],"interesting_parent_ids":["GO:0003779","GO:0005488","GO:0008092","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"actin filament binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"F-actin binding","type":"exact"},{"name":"actin cross-linking activity","type":"related"}],"termid":"GO:0051015","terms_by_termid":{"GO:0003786":null,"GO:0051015":null}}


id: PBO:0090503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp3","termid":"PBO:0090503"}


id: PBO:0088560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hikeshi family nuclear import carrier Opi10","termid":"PBO:0088560"}


id: PBO:0056897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor 2","termid":"PBO:0056897"}


id: PBO:0028206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_midzone","termid":"PBO:0028206"}


id: FYPO:0003099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is normal (i.e. indistinguishable from wild type). Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["PomBase:mah","GO:0031507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization during vegetative growth","termid":"FYPO:0002891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal heterochromatin assembly","synonyms":[{"name":"normal heterochromatin assembly during mitotic cell cycle","type":"related"},{"name":"normal heterochromatin assembly during vegetative growth","type":"exact"},{"name":"normal heterochromatin formation","type":"exact"}],"termid":"FYPO:0003099"}


id: GO:0060700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of ribonuclease activity, catalysis of the hydrolysis of phosphodiester bonds in chains of RNA.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ribonuclease activity","termid":"GO:0060700"}


id: GO:0019227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The propagation of an action potential along an axon, away from the soma.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"is_a","term_name":"action potential propagation","termid":"GO:0098870"},{"relation_name":"part_of","term_name":"transmission of nerve impulse","termid":"GO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal action potential propagation","termid":"GO:0019227"}


id: GO:0006309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cleavage of DNA during apoptosis, which usually occurs in two stages: cleavage into fragments of about 50 kbp followed by cleavage between nucleosomes to yield 200 bp fragments.","definition_xrefs":["GOC:dph","GOC:mah","GOC:mtg_apoptosis","GOC:tb","PMID:15723341","PMID:23379520","ISBN:0721639976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA catabolic process","termid":"GO:0006308"},{"relation_name":"part_of","term_name":"apoptotic nuclear changes","termid":"GO:0030262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"apoptotic DNA fragmentation","secondary_identifiers":["Reactome:R-HSA-140342","GO:0008178"],"synonyms":[{"name":"DNA catabolic process during apoptosis","type":"exact"},{"name":"DNA catabolism during apoptosis","type":"exact"},{"name":"DNA fragmentation","type":"broad"},{"name":"DNA fragmentation involved in apoptotic nuclear change","type":"exact"},{"name":"chromatinolysis","type":"broad"},{"name":"endonucleolytic DNA catabolic process involved in apoptosis","type":"exact"}],"termid":"GO:0006309"}


id: PBO:0040998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3 pseudogene 3","termid":"PBO:0040998"}


id: PBO:0041618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding protein 4","termid":"PBO:0041618"}


id: GO:0102487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dUTP + 2 H2O = dUMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dUTP phosphohydrolase activity (obsolete GO:0102487)","termid":"GO:0102487"}


id: PBO:0062460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 145 pseudogene","termid":"PBO:0062460"}


id: PBO:0054755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2166","termid":"PBO:0054755"}


id: GO:0008254
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3'-ribonucleotide + H2O = a ribonucleoside + phosphate.","definition_xrefs":["EC:3.1.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidase activity","termid":"GO:0008252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"3'-nucleotidase activity","secondary_identifiers":["RHEA:10144","MetaCyc:3-NUCLEOTID-RXN"],"synonyms":[{"name":"3' nucleotidase activity","type":"exact"},{"name":"3'-mononucleotidase activity","type":"related"},{"name":"3'-phosphatase activity","type":"related"},{"name":"3'-ribonucleotidase activity","type":"related"},{"name":"3'-ribonucleotide phosphohydrolase activity","type":"related"}],"termid":"GO:0008254"}


id: PBO:0038989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor beta 3","termid":"PBO:0038989"}


id: MONDO:0008762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive Alport syndrome isa genetic condition characterized by kidney disease, hearing loss, and eye abnormalities. Most affected individuals experience progressive loss of kidney function, usually resulting in end-stage kidney disease. People with Alport syndrome frequently develop sensorineural hearing loss in late childhood or early adolescence. The eye abnormalities seen in this condition seldom lead to vision loss. Alport syndrome can have different patterns of inheritance. About15 percentof Alport syndrome cases are inherited in an autosomal recessive pattern and are caused bymutations in both copies of the COL4A3 or COL4A4 genes. Treatment is based on the symptoms present and may include medications to delay the progression of kidney disease. In most cases, a kidney transplant is eventually needed.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Alport syndrome","termid":"MONDO:0018965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"autosomal recessive Alport syndrome","secondary_identifiers":["MedDRA:10001843","OMIM:203780","DOID:0110033","MEDGEN:1648334","UMLS:C4746745","GARD:625","Orphanet:88919","SCTID:717767009"],"synonyms":[{"name":"Alport syndrome 2, autosomal recessive","type":"exact"},{"name":"Alport syndrome autosomal recessive","type":"related"},{"name":"Alport syndrome recessive type","type":"related"},{"name":"Alport syndrome, autosomal recessive","type":"exact"},{"name":"nephropathy and deafness","type":"related"}],"termid":"MONDO:0008762","xrefs":{"Monarch":{"xref_id":"0008762"}}}


id: MONDO:0000630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the immune organ.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immune system organ benign neoplasm","secondary_identifiers":["DOID:0060092"],"synonyms":[{"name":"immune organ benign neoplasm","type":"exact"}],"termid":"MONDO:0000630","xrefs":{"Monarch":{"xref_id":"0000630"}}}


id: GO:0033690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of osteoblast proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of osteoblast proliferation","termid":"GO:0033688"},{"relation_name":"positively_regulates","term_name":"osteoblast proliferation","termid":"GO:0033687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of osteoblast proliferation","synonyms":[{"name":"activation of osteoblast proliferation","type":"narrow"},{"name":"stimulation of osteoblast proliferation","type":"narrow"},{"name":"up regulation of osteoblast proliferation","type":"exact"},{"name":"up-regulation of osteoblast proliferation","type":"exact"},{"name":"upregulation of osteoblast proliferation","type":"exact"}],"termid":"GO:0033690"}


id: PBO:0046064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 3","termid":"PBO:0046064"}


id: GO:0080064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A lipid oxidation process proceeding through a series of three successive monooxygenations of the alpha methyl group on the C4 carbon (CH3 to CH2OH to CHO to COOH) and resulting in this overall reaction: 4,4-dimethyl-9beta,19-cyclopropylsterol + 3 NADPH + 3 H+ + 3 O2 = 4-alpha-carboxy, 4-beta-methyl-9beta,19-cyclopropylsterol + 3 NADP+ + 3 H2O.","definition_xrefs":["PMID:14653780","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid oxidation","termid":"GO:0034440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"4,4-dimethyl-9beta,19-cyclopropylsterol oxidation","synonyms":[{"name":"4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase activity","type":"related"}],"termid":"GO:0080064"}


id: GO:0010875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cholesterol efflux. Cholesterol efflux is the directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol efflux","termid":"GO:0010874"},{"relation_name":"is_a","term_name":"positive regulation of cholesterol transport","termid":"GO:0032376"},{"relation_name":"positively_regulates","term_name":"cholesterol efflux","termid":"GO:0033344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholesterol efflux","termid":"GO:0010875"}


id: PR:P40370
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eno101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1815.01","synonyms":[{"name":"2-phospho-D-glycerate hydro-lyase 1-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2-phosphoglycerate dehydratase 1-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-eno101","type":"exact"}],"termid":"PR:P40370"}


id: MONDO:0003140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the glomeruli characterized by the accumulation of antibody-antigen immune complexes, resulting in glomerular damage and impaired kidney function.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"immune-complex glomerulonephritis","secondary_identifiers":["DOID:4784","ICD9:583.89","MEDGEN:148168","NCIT:C35800","UMLS:C0744421","SCTID:123752003"],"synonyms":[{"name":"immune Complex glomerulonephritis","type":"exact"}],"termid":"MONDO:0003140","xrefs":{"Monarch":{"xref_id":"0003140"}}}


id: GO:1904935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation in midbrain.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:24431302","GOC:bf","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell proliferation in midbrain","termid":"GO:1904933"},{"relation_name":"is_a","term_name":"positive regulation of neural precursor cell proliferation","termid":"GO:2000179"},{"relation_name":"positively_regulates","term_name":"cell proliferation in midbrain","termid":"GO:0033278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation in midbrain","synonyms":[{"name":"activation of cell proliferation in mesencephalon","type":"narrow"},{"name":"activation of cell proliferation in midbrain","type":"narrow"},{"name":"activation of mesencepahalic cell proliferation","type":"related"},{"name":"positive regulation of cell proliferation in mesencephalon","type":"exact"},{"name":"positive regulation of mesencepahalic cell proliferation","type":"related"},{"name":"up regulation of cell proliferation in mesencephalon","type":"exact"},{"name":"up regulation of cell proliferation in midbrain","type":"exact"},{"name":"up regulation of mesencepahalic cell proliferation","type":"related"},{"name":"up-regulation of cell proliferation in mesencephalon","type":"exact"},{"name":"up-regulation of cell proliferation in midbrain","type":"exact"},{"name":"up-regulation of mesencepahalic cell proliferation","type":"related"},{"name":"upregulation of cell proliferation in mesencephalon","type":"exact"},{"name":"upregulation of cell proliferation in midbrain","type":"exact"},{"name":"upregulation of mesencepahalic cell proliferation","type":"related"}],"termid":"GO:1904935"}


id: PBO:0062089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 21 pseudogene","termid":"PBO:0062089"}


id: PBO:0005077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-dependent NAD(+) synthetase (predicted)","termid":"PBO:0005077"}


id: GO:0051904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of pigment granules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"is_a","term_name":"pigment granule localization","termid":"GO:0051875"},{"relation_name":"is_a","term_name":"establishment of pigment granule localization","termid":"GO:0051905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"pigment granule transport","synonyms":[{"name":"pigment granule translocation","type":"exact"}],"termid":"GO:0051904"}


id: PBO:0018289
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mid1 function is not conserved between pombe and japonicus","termid":"PBO:0018289"}


id: GO:1902035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hematopoietic stem cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:23403623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hematopoietic stem cell proliferation","termid":"GO:1902033"},{"relation_name":"is_a","term_name":"positive regulation of stem cell proliferation","termid":"GO:2000648"},{"relation_name":"positively_regulates","term_name":"hematopoietic stem cell proliferation","termid":"GO:0071425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hematopoietic stem cell proliferation","synonyms":[{"name":"activation of hematopoietic stem cell proliferation","type":"narrow"},{"name":"activation of hemopoietic stem cell proliferation","type":"narrow"},{"name":"positive regulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"up regulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"up regulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"up-regulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"up-regulation of hemopoietic stem cell proliferation","type":"exact"},{"name":"upregulation of hematopoietic stem cell proliferation","type":"exact"},{"name":"upregulation of hemopoietic stem cell proliferation","type":"exact"}],"termid":"GO:1902035"}


id: PBO:0030325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cortical_patch_localization","termid":"PBO:0030325"}


id: GO:0034205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of amyloid-beta by cleavage of the amyloid precursor protein (APP).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloid precursor protein catabolic process","termid":"GO:0042987"},{"relation_name":"is_a","term_name":"amyloid-beta metabolic process","termid":"GO:0050435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid-beta formation","synonyms":[{"name":"beta-amyloid formation","type":"exact"},{"name":"beta-amyloid polypeptide formation from APP","type":"exact"},{"name":"beta-amyloid polypeptide formation from amyloid precursor protein","type":"exact"}],"termid":"GO:0034205"}


id: MONDO:0016788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Genetic hyperferritinemia without iron overload is a rare biological anomaly defined as high serum ferritin levels without elevations of transferrin saturation, tissue or serum iron and characterized by an apparently asymptomatic clinical phenotype.","definition_xrefs":["Orphanet:254704"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic hyperferritinemia without iron overload (obsolete MONDO:0016788)","secondary_identifiers":["SCTID:766929007"],"synonyms":[{"name":"benign hyperferritinemia","type":"exact"}],"termid":"MONDO:0016788","xrefs":{"Monarch":{"xref_id":"0016788"}}}


id: MONDO:0044719
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe, sometimes life-threatening, form of erythema multiforme. It is considered to be a hypersensitivity skin reaction triggered by a variety of stimuli, including infections and medication. It is characterized by raised, edematous papules in the extremities; involvement of one or more mucous membranes; and epidermal detachment involving less than ten percent of the total body surface area.","definition_xrefs":["NCIT:C3385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic dermatosis","termid":"MONDO:0017396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythema multiforme major","secondary_identifiers":["UMLS:C3241919","Orphanet:502499","GARD:22049","MEDGEN:469028"],"synonyms":[{"name":"erythema exsudativum multiforme majus","type":"exact"},{"name":"erythema multiforme majus","type":"exact"}],"termid":"MONDO:0044719","xrefs":{"Monarch":{"xref_id":"0044719"}}}


id: PBO:0050412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPDL pseudogene 1","termid":"PBO:0050412"}


id: PBO:0048215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit rho2","termid":"PBO:0048215"}


id: FYPO:0001137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the mature 25S rRNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mature rRNA level","termid":"FYPO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased mature 25S rRNA level","synonyms":[{"name":"decreased 25S rRNA level","type":"broad"},{"name":"decreased mature 25S rRNA accumulation","type":"related"},{"name":"decreased mature 25S rRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature 25S rRNA level during vegetative growth","type":"exact"},{"name":"decreased mature 25S rRNA transcript level","type":"exact"},{"name":"reduced mature 25S rRNA level","type":"exact"}],"termid":"FYPO:0001137"}


id: PBO:0043318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAP-Gly domain containing linker protein 1","termid":"PBO:0043318"}


id: PR:Q9P7M3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slx1 gene.","definition_xrefs":["UniProtKB:Q9P7M3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease subunit slx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.15","synonyms":[{"name":"Spom972h-slx1","type":"exact"}],"termid":"PR:Q9P7M3"}


id: PBO:0085809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; encodes new type of domain, which ab initio modeling suggests is predominantly alpha-helical; nonessential for growth, deletion increases sensitivity to osmostress; expressed at moderate to high abundance; ORF also present in strains EC1118, YJM789, RM11-1a, and AWRI1631; Gln24 in S288C reference is substituted with Arg in wine strain EC1118; predicted S-palmitoylation site on Cys2, suggesting membrane association; transcript previously mischaracterized as SUT646","termid":"PBO:0085809"}


id: GO:0140052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxidized lipoprotein particle stimulus.","definition_xrefs":["GOC:aruk","PMID:20037584","PMID:27607416","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to low-density lipoprotein particle stimulus","termid":"GO:0071404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oxidised low-density lipoprotein particle stimulus","synonyms":[{"name":"cellular response to ox-LDL particle stimulus","type":"exact"},{"name":"cellular response to oxLDL particle stimulus","type":"exact"},{"name":"cellular response to oxidised LDL particle stimulus","type":"exact"},{"name":"cellular response to oxidized LDL particle stimulus","type":"exact"},{"name":"cellular response to oxidized low-density lipoprotein particle stimulus","type":"exact"}],"termid":"GO:0140052"}


id: PR:P40388
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uvi15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UV-induced protein uvi15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC649.04","synonyms":[{"name":"Spom972h-uvi15","type":"exact"}],"termid":"PR:P40388"}


id: GO:1902459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of stem cell population maintenance.","definition_xrefs":["GOC:TermGenie","PMID:22969033","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of stem cell population maintenance","termid":"GO:2000036"},{"relation_name":"positively_regulates","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stem cell population maintenance","synonyms":[{"name":"activation of maintenance of pluripotency","type":"related"},{"name":"activation of stem cell maintenance","type":"narrow"},{"name":"positive regulation of maintenance of pluripotency","type":"related"},{"name":"up regulation of maintenance of pluripotency","type":"related"},{"name":"up regulation of stem cell maintenance","type":"exact"},{"name":"up-regulation of maintenance of pluripotency","type":"related"},{"name":"up-regulation of stem cell maintenance","type":"exact"},{"name":"upregulation of maintenance of pluripotency","type":"related"},{"name":"upregulation of stem cell maintenance","type":"exact"}],"termid":"GO:1902459"}


id: PBO:0078592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 5, Y-linked","termid":"PBO:0078592"}


id: PBO:0045656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled segment polarity protein 1","termid":"PBO:0045656"}


id: PBO:0054438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1834","termid":"PBO:0054438"}


id: MONDO:0009674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, adult-onset, with leukoencephalopathy","secondary_identifiers":["MESH:C565361","OMIM:253590","MEDGEN:340269","UMLS:C1854646"],"synonyms":[{"name":"muscular dystrophy, adult-onset, with leukoencephalopathy","type":"exact"}],"termid":"MONDO:0009674","xrefs":{"Monarch":{"xref_id":"0009674"}}}


id: PBO:0052087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 3","termid":"PBO:0052087"}


id: MONDO:0850335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glioblastoma that is characterized by high cellularity, high mitotic activity, necrosis or microvascular proliferation and that lacks mutations in IDH genes.","definition_xrefs":["DOID:0080878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioblastoma","termid":"MONDO:0018177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"IDH-wildtype glioblastoma","secondary_identifiers":["NCIT:C39750"],"termid":"MONDO:0850335","xrefs":{"Monarch":{"xref_id":"0850335"}}}


id: PBO:0053066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LATS2 antisense RNA 1","termid":"PBO:0053066"}


id: PBO:0002190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat protein Ppk3","termid":"PBO:0002190"}


id: MONDO:0000911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the TMPO gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"gene_count":0,"genotype_count":0,"name":"obsolete dilated cardiomyopathy 1T (obsolete MONDO:0000911)","secondary_identifiers":["MESH:C566052","OMIM:613740","DOID:0110452"],"synonyms":[{"name":"CMD1T","type":"exact"},{"name":"TMPO familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1T","type":"exact"},{"name":"cardiomyopathy, dilated, type 1T","type":"exact"},{"name":"dilated cardiomyopathy type 1T","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in TMPO","type":"exact"},{"name":"moved to 115200","type":"related"}],"termid":"MONDO:0000911","xrefs":{"Monarch":{"xref_id":"0000911"}}}


id: MONDO:0003543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the trigeminal nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve neuropathy","termid":"MONDO:0003569"},{"relation_name":"is_a","term_name":"peripheral nervous system disorder","termid":"MONDO:0003620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigeminal nerve disorder","secondary_identifiers":["MESH:D020433","ICD9:350.8","EFO:0009569","DOID:561","NCIT:C26952","UMLS:C0152177","MEDGEN:101823","SCTID:64309007"],"synonyms":[{"name":"disease of trigeminal nerve","type":"exact"},{"name":"disease or disorder of trigeminal nerve","type":"exact"},{"name":"disorder of the fifth cranial nerve","type":"related"},{"name":"disorder of trigeminal nerve","type":"exact"},{"name":"disorders of the fifth nerve","type":"related"},{"name":"disorders of the vth cranial nerve","type":"related"},{"name":"trigeminal nerve disease","type":"exact"},{"name":"trigeminal nerve disease or disorder","type":"exact"},{"name":"trigeminal nerve disorder","type":"exact"}],"termid":"MONDO:0003543","xrefs":{"Monarch":{"xref_id":"0003543"}}}


id: MONDO:0010730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"combined immunodeficiency","termid":"MONDO:0015131"},{"relation_name":"is_a","term_name":"T-B+ severe combined immunodeficiency","termid":"MONDO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency, X-linked","secondary_identifiers":["EFO:1001451","OMIM:312863"],"synonyms":[{"name":"CIDX","type":"related"},{"name":"Xcid","type":"related"},{"name":"combined immunodeficiency, X-linked","type":"exact"},{"name":"combined immunodeficiency, X-linked, moderate, X-linked recessive","type":"exact"},{"name":"immunodeficiency 6","type":"related"}],"termid":"MONDO:0010730","xrefs":{"Monarch":{"xref_id":"0010730"}}}


id: GO:0035758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chemokine (C-C motif) ligand 21.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine binding","termid":"GO:0019957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 21 binding","synonyms":[{"name":"CCL21 binding","type":"exact"}],"termid":"GO:0035758"}


id: PBO:0044358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 45","termid":"PBO:0044358"}


id: PBO:0110428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP10 pseudogene 3","termid":"PBO:0110428"}


id: PBO:0082606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cochaperone protein; regulates activity of adenylyl cyclase Cyr1p; involved in kinetochore complex assembly; associates with the SCF (Skp1p/Cdc53p/F box protein) ubiquitin ligase complex; acts as a linker between Skp1p and HSP90 complexes; protein abundance increases in response to DNA replication stress","termid":"PBO:0082606"}


id: PBO:0002727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, nucleoporin Nup37 (predicted)","termid":"PBO:0002727"}


id: PBO:0043364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin light chain B","termid":"PBO:0043364"}


id: PBO:0063094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"par-3 family cell polarity regulator","termid":"PBO:0063094"}


id: GO:0061398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to an copper ion stimulus.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to copper ion (obsolete GO:0061398)","termid":"GO:0061398"}


id: FYPO:0000987
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular response phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter results in a lower-than-normal level of transcription at a given pheromone level.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased transcriptional response to pheromone at normal pheromone level (obsolete FYPO:0000987)","synonyms":[{"name":"decreased positive regulation of transcription from RNA polymerase II promoter by pheromones at normal pheromone level","type":"exact"},{"name":"decreased sensitivity of positive regulation of transcription from RNA polymerase II promoter by pheromones to pheromone","type":"related"},{"name":"decreased transcriptional response to pheromone","type":"related"},{"name":"reduced transcriptional response to pheromone at normal pheromone level","type":"exact"},{"name":"resistant to pheromone","type":"related"}],"termid":"FYPO:0000987"}


id: PBO:0001121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI inositol deacylase (predicted)","termid":"PBO:0001121"}


id: MONDO:0017759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of neurotransmitter metabolism and transport","termid":"MONDO:0019219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of catecholamine synthesis","secondary_identifiers":["UMLS:C0342685","GARD:21351","icd11.foundation:1382276026","MEDGEN:575179","ICD9:270.8","Orphanet:309830","SCTID:237921002"],"termid":"MONDO:0017759","xrefs":{"Monarch":{"xref_id":"0017759"}}}


id: GO:0042076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of peptidyl-amino acids through a phosphoester bond forming, for example, GlcNAc-alpha-1-P-Ser residues.","definition_xrefs":["PMID:7499424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein phosphate-linked glycosylation","synonyms":[{"name":"phosphoglycosylation","type":"exact"},{"name":"protein amino acid phosphate-linked glycosylation","type":"exact"}],"termid":"GO:0042076"}


id: PBO:0055491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2925","termid":"PBO:0055491"}


id: GO:0098956
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the dense core granule membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of dense core granule membrane (obsolete GO:0098956)","synonyms":[{"name":"intrinsic to dense core granule membrane","type":"exact"}],"termid":"GO:0098956"}


id: PBO:0061295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide B","termid":"PBO:0061295"}


id: PBO:0038695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 7","termid":"PBO:0038695"}


id: PBO:0079072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 6-1","termid":"PBO:0079072"}


id: PBO:0052930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 20-2","termid":"PBO:0052930"}


id: MONDO:0032792
data:
  {"annotated_genes":["SJAG_00252","SJAG_01383"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87288,87289],"is_not":false,"summary":null,"term":"MONDO:0032792"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy type 6","termid":"MONDO:0019551"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_01383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuropathy, hereditary motor and sensory, type VIc, with optic atrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618511","MEDGEN:1680245","UMLS:C5193137"],"synonyms":[{"name":"CMT 6C","type":"exact"},{"name":"CMT6C","type":"exact"},{"name":"Charcot-Marie-Tooth Disease, Type 6C","type":"exact"},{"name":"HMSN 6C","type":"exact"},{"name":"HMSN6C","type":"exact"},{"name":"neuropathy, hereditary motor and sensory, type VIc, with optic atrophy","type":"exact"}],"termid":"MONDO:0032792","terms_by_termid":{"MONDO:0032792":null},"xrefs":{"Monarch":{"xref_id":"0032792"}}}


id: GO:0039565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of host STAT1 (signal transducer and activator of transcription-1) by promoting the ubiquitin-dependent degradation of STAT1, mediated by the proteasome.","definition_xrefs":["VZ:282","PMID:16227264","PMID:15280488"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host STAT1 activity by positive regulation of STAT1 catabolic process (obsolete GO:0039565)","synonyms":[{"name":"promotion by virus of proteosome-dependent STAT1 degradation","type":"exact"},{"name":"suppression by virus of host STAT1 activity by positive promotion of STAT1 proteasome-mediated degradation","type":"exact"},{"name":"targeting STAT1 for proteasome-mediated degradation","type":"exact"}],"termid":"GO:0039565"}


id: FYPO:0005020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of actomyosin contractile ring contraction is normal (i.e. indistinguishable from wild type). Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["PomBase:mah","GO:1902404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actomyosin contractile ring contraction","termid":"FYPO:0004097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal duration of actomyosin contractile ring contraction","synonyms":[{"name":"normal duration of actomyosin contractile ring constriction","type":"exact"},{"name":"normal duration of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"normal duration of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"normal duration of contractile ring contraction","type":"exact"},{"name":"normal duration of cytokinetic contractile ring contraction","type":"exact"},{"name":"normal duration of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"normal duration of mitotic contractile ring contraction","type":"exact"}],"termid":"FYPO:0005020"}


id: GO:0010906
data:
  {"annotated_genes":["SJAG_05006","SJAG_01402"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75468],"is_not":false,"summary":null,"term":"GO:0010906"},{"annotations":[96909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of glucose metabolism. Glucose metabolic processes are the chemical reactions and pathways involving glucose, the aldohexose gluco-hexose.","definition_xrefs":["GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"glucose metabolic process","termid":"GO:0006006"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01402":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of glucose metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of glucose metabolism","type":"exact"}],"termid":"GO:0010906","terms_by_termid":{"GO:0010906":null,"GO:2001172":null}}


id: PBO:0068073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 378","termid":"PBO:0068073"}


id: PBO:0061041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 2","termid":"PBO:0061041"}


id: PBO:0044086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A6","termid":"PBO:0044086"}


id: GO:0042808
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to neuronal Cdc2-like kinase, an enzyme involved in the regulation of neuronal differentiation and neuro-cytoskeleton dynamics.","definition_xrefs":["GOC:jl","PMID:10721722"],"gene_count":0,"genotype_count":0,"name":"obsolete neuronal Cdc2-like kinase binding (obsolete GO:0042808)","synonyms":[{"name":"neuronal Cdc2-like kinase binding","type":"exact"}],"termid":"GO:0042808"}


id: MONDO:0100100
data:
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id: PBO:0053394
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id: MOD:01544
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01544"}


id: PBO:0001264
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id: SO:0001498
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id: PBO:0047219
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id: MONDO:1011818
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id: PBO:0064105
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id: PBO:0004788
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id: MONDO:0011430
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id: PBO:0055855
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id: GO:0015137
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id: MONDO:0003757
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id: GO:0019153
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id: GO:0051983
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id: PBO:0116196
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id: GO:0050315
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id: GO:0006659
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id: GO:0061529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of epinephrine by a cell in which the epinephrine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epinephrine secretion","termid":"GO:0048242"},{"relation_name":"is_a","term_name":"catecholamine secretion, neurotransmission","termid":"GO:0160043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"epinephrine secretion, neurotransmission","synonyms":[{"name":"adrenaline secretion, neurotransmission","type":"exact"}],"termid":"GO:0061529"}


id: GO:0044424
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular part (obsolete GO:0044424)","termid":"GO:0044424"}


id: PBO:0057672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1263","termid":"PBO:0057672"}


id: MONDO:0800302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease I","termid":"MONDO:0002413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"glycogen storage disease Id","secondary_identifiers":["MEDGEN:87456","UMLS:C0342750"],"synonyms":[{"name":"GSD1D","type":"exact"}],"termid":"MONDO:0800302","xrefs":{"Monarch":{"xref_id":"0800302"}}}


id: PBO:0064831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 9B","termid":"PBO:0064831"}


id: FYPO:0006213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, and structure of the septum is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal septum morphology","synonyms":[{"name":"normal septum morphology during mitotic cell cycle","type":"related"},{"name":"normal septum morphology during vegetative growth","type":"exact"}],"termid":"FYPO:0006213"}


id: PBO:0027731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_calcium_ion","termid":"PBO:0027731"}


id: GO:0031756
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an Edg-3 sphingosine 1-phosphate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial differentiation G protein-coupled receptor binding","termid":"GO:0031753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"Edg-3 sphingosine 1-phosphate receptor binding","synonyms":[{"name":"Edg-3 sphingosine 1-phosphate receptor ligand","type":"narrow"}],"termid":"GO:0031756"}


id: PBO:0005753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S2 (predicted)","termid":"PBO:0005753"}


id: MONDO:0016132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hereditary disease with peripheral neuropathy (obsolete MONDO:0016132)","secondary_identifiers":["Orphanet:207015"],"termid":"MONDO:0016132","xrefs":{"Monarch":{"xref_id":"0016132"}}}


id: PBO:0016099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in ribosome biogenesis Nip7 (predicted)","termid":"PBO:0016099"}


id: PBO:0091474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase, implicated in vitamin metabolism, or cellular detoxification","termid":"PBO:0091474"}


id: GO:0140300
data:
  {"annotated_genes":["SJAG_04588"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90942],"is_not":false,"summary":null,"term":"GO:0140300"}]},"cv_name":"biological_process","definition":"The process in which serine is transported from the cytosol into the mitochondrial matrix.","definition_xrefs":["PMID:30442778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"serine transport","termid":"GO:0032329"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"serine import into mitochondrion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140300","terms_by_termid":{"GO:0140300":null}}


id: PR:Q9Y7V0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug117 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7V0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 117 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.11c","synonyms":[{"name":"Spom972h-mug117","type":"exact"}],"termid":"PR:Q9Y7V0"}


id: MONDO:0044233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hair whorl (obsolete MONDO:0044233)","secondary_identifiers":["OMIM:139400"],"synonyms":[{"name":"Cowlick","type":"related"},{"name":"Double hair whorl","type":"related"},{"name":"hair whorl","type":"related"}],"termid":"MONDO:0044233","xrefs":{"Monarch":{"xref_id":"0044233"}}}


id: GO:0018214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a carboxy group to a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein carboxylation","synonyms":[{"name":"protein amino acid carboxylation","type":"exact"}],"termid":"GO:0018214"}


id: PBO:0047889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(6)(p22.2)","termid":"PBO:0047889"}


id: FYPO:0004600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which regulation of transcription in response to mating pheromone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal transcriptional response to pheromone","synonyms":[{"name":"normal regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"}],"termid":"FYPO:0004600"}


id: GO:1900343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from dimethyl sulfide.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from dimethyl sulfide","termid":"GO:1900342"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from dimethyl sulfide","termid":"GO:2001131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from dimethyl sulfide","synonyms":[{"name":"down regulation of methane biosynthetic process from dimethyl sulfide","type":"exact"},{"name":"down-regulation of methane biosynthetic process from dimethyl sulfide","type":"exact"},{"name":"downregulation of methane biosynthetic process from dimethyl sulfide","type":"exact"},{"name":"inhibition of methane biosynthetic process from dimethyl sulfide","type":"narrow"}],"termid":"GO:1900343"}


id: PBO:0045564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 12 pseudogene 1","termid":"PBO:0045564"}


id: GO:0008351
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule severing activity (obsolete GO:0008351)","synonyms":[{"name":"microtubule severing activity","type":"exact"}],"termid":"GO:0008351"}


id: MOD:01248
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of iodouridine monophosphate with an L-tyrosine residue to form an ether linkage.","definition_xrefs":["Unimod:292#Y","PubMed:11567090","PubMed:11112526","PubMed:6540775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodouridine monophosphate derivatized residue","termid":"MOD:00611"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodouridine monophosphate derivatized tyrosine","synonyms":[{"name":"Cross-link of (Iodo)-uracil MP with W,F,Y","type":"related"},{"name":"IodoU-AMP","type":"related"}],"termid":"MOD:01248"}


id: GO:1903476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any protein localization to cell division site that is involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","GO_REF:0000060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell division site involved in cytokinesis, actomyosin contractile ring assembly","termid":"GO:1902575"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic actomyosin contractile ring assembly","termid":"GO:1903475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0051179","GO:0007010","GO:0000281","GO:0030036","GO:0044085"],"is_obsolete":false,"name":"protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","synonyms":[{"name":"protein localisation to cell division site involved in mitotic actomyosin contractile ring assembly","type":"exact"},{"name":"protein localization to cell division site involved in actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"protein localization to cell division site involved in contractile ring assembly involved in mitotic cytokinesis","type":"exact"}],"termid":"GO:1903476"}


id: GO:0047281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyrophosphate + a 2,4-dioxotetrahydropyrimidine D-ribonucleotide = PRPP + a 2,4-dioxotetrahydropyrimidine.","definition_xrefs":["EC:2.4.2.20","MetaCyc:2.4.2.20-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"dioxotetrahydropyrimidine phosphoribosyltransferase activity","secondary_identifiers":["RHEA:10232"],"synonyms":[{"name":"2,4-dioxotetrahydropyrimidine-nucleotide:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"},{"name":"dioxotetrahydropyrimidine phosphoribosyl transferase activity","type":"related"},{"name":"dioxotetrahydropyrimidine ribonucleotide pyrophosphorylase activity","type":"related"},{"name":"dioxotetrahydropyrimidine-ribonucleotide diphosphorylase activity","type":"related"},{"name":"dioxotetrahydropyrimidine-ribonucleotide pyrophosphorylase activity","type":"related"}],"termid":"GO:0047281"}


id: PBO:0050567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histamine receptor H3","termid":"PBO:0050567"}


id: PBO:0086490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative oxidoreductase, subunit of Coenzyme Q biosynthetic complexes; required for synthesis of wild-type levels of Coenzyme Q (ubiquinone); member of the short-chain dehydrogenase/reductase (SDR) superfamily; orthologous gene in some other fungi is fused to the COQ10 ortholog","termid":"PBO:0086490"}


id: MONDO:0001641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Preeclampsia with a systolic blood pressure of 160 mmHg or higher, or a diastolic blood pressure of 110 mmHg or higher on two occasions at least 4 hours apart while on bedrest. It is associated with thrombocytopenia (platelets less than 100,000 per microliter), impaired liver function (twice normal elevation of hepatic transaminases; severe, persistent right upper quadrant or epigastric pain), progressive renal insufficiency (serum creatinine greater than 1.1 mg/dL or doubling of baseline in the absence of other renal disease), pulmonary edema, or new-onset cerebral or visual disturbances.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preeclampsia","termid":"MONDO:0005081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe pre-eclampsia","secondary_identifiers":["MEDGEN:574734","DOID:13129","ICD9:642.50","NCIT:C112843","icd11.foundation:479404771","UMLS:C0341950"],"synonyms":[{"name":"Preeclampsia with severe features","type":"exact"},{"name":"antepartum severe pre-eclampsia","type":"exact"},{"name":"postpartum severe pre-eclampsia","type":"exact"},{"name":"severe pre-eclampsia, with delivery","type":"exact"},{"name":"severe preeclampsia","type":"exact"}],"termid":"MONDO:0001641","xrefs":{"Monarch":{"xref_id":"0001641"}}}


id: GO:0018833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane = 1,1-dichloro-2,2-bis(4-chlorophenyl)ethylene + chloride + H+.","definition_xrefs":["EC:4.5.1.1","RHEA:19217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"DDT-dehydrochlorinase activity","secondary_identifiers":["MetaCyc:DDT-DEHYDROCHLORINASE-RXN","UM-BBD_reactionID:r0439","KEGG_REACTION:R04522"],"synonyms":[{"name":"1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane chloride-lyase [1,1-dichloro-2,2-bis(4-chlorophenyl)ethylene-forming]","type":"related"},{"name":"1,1,1-trichloro-2,2-bis(4-chlorophenyl)ethane chloride-lyase activity","type":"related"},{"name":"DDT dehydrochlorinase activity","type":"exact"},{"name":"DDT-as","type":"related"},{"name":"DDT-ase activity","type":"related"},{"name":"DDTase activity","type":"related"}],"termid":"GO:0018833"}


id: PBO:0080335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 99 pseudogene","termid":"PBO:0080335"}


id: PBO:0087317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Small-subunit processome protein involved in pre-18S rRNA maturation; part of a subunit of the 90S preribosomal particle capable of interacting directly with the 5' ETS of the 35S pre-rRNA; contains WD40 repeats","termid":"PBO:0087317"}


id: MONDO:0002535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm characterized by a papillary growth pattern, lack of significant cytologic atypia, and a wart-like appearance.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"verrucous papilloma","secondary_identifiers":["ICDO:8051/0","MEDGEN:83114","NCIT:C4101","DOID:3177","UMLS:C0334243"],"termid":"MONDO:0002535","xrefs":{"Monarch":{"xref_id":"0002535"}}}


id: PBO:0004186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZnF type","termid":"PBO:0004186"}


id: PBO:0057976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3691","termid":"PBO:0057976"}


id: MONDO:0012833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Crouzon syndrome with acanthosis nigricans (CAN) is a very rare, clinically heterogeneous form of faciocraniostenosis with Crouzon-like features and premature synostosis of cranial sutures (Crouzon disease), associated with acanthosis nigricans (AN).","definition_xrefs":["Orphanet:93262"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"Crouzon syndrome-acanthosis nigricans syndrome","secondary_identifiers":["NCIT:C38145","GARD:16810","DOID:0111161","UMLS:C2677099","MEDGEN:394201","MESH:C567382","OMIM:612247","SCTID:702361006"],"synonyms":[{"name":"CAN","type":"exact"},{"name":"Chronic kidney allograft nephropathy","type":"exact"},{"name":"Crouzon syndrome with acanthosis nigricans","type":"related"},{"name":"Crouzon-dermoskeletal syndrome","type":"exact"},{"name":"Crouzonodermoskeletal syndrome","type":"exact"},{"name":"can","type":"related"},{"name":"chronic allograft nephropathy","type":"exact"}],"termid":"MONDO:0012833","xrefs":{"Monarch":{"xref_id":"0012833"}}}


id: PBO:0034746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved GTPase Gpn2 (predicted)","termid":"PBO:0034746"}


id: GO:0008259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta ligand binding to type I receptor (obsolete GO:0008259)","synonyms":[{"name":"TGF-beta ligand binding to type I receptor","type":"exact"},{"name":"TGFbeta ligand binding to type I receptor","type":"exact"},{"name":"transforming growth factor beta ligand binding to type I receptor","type":"exact"}],"termid":"GO:0008259"}


id: PBO:0003600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Msl1 (predicted)","termid":"PBO:0003600"}


id: SO:0000977
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anchor_binding_site","synonyms":[{"name":"anchor binding site","type":"exact"}],"termid":"SO:0000977"}


id: PBO:0051122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-9 (non-functional)","termid":"PBO:0051122"}


id: MONDO:1012882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Charcot-Marie-Tooth disease that occurs in cattle due to a mutation in the FGD4 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease, non-human animal","termid":"MONDO:1012964"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot Marie Tooth disease, FGD4-related, cattle","secondary_identifiers":["OMIA:002374-9913"],"termid":"MONDO:1012882","xrefs":{"Monarch":{"xref_id":"1012882"}}}


id: MONDO:0017791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta","termid":"MONDO:0019019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"high bone mass osteogenesis imperfecta","secondary_identifiers":["MEDGEN:1672817","GARD:21366","Orphanet:314029","UMLS:C5190607","ICD10CM:Q78.0"],"synonyms":[{"name":"high bone mass OI","type":"exact"}],"termid":"MONDO:0017791","xrefs":{"Monarch":{"xref_id":"0017791"}}}


id: GO:0030849
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any chromosome other than a sex chromosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"autosome","secondary_identifiers":["Wikipedia:Autosome"],"termid":"GO:0030849"}


id: GO:0051192
data:
  {"annotated_genes":["SJAG_01238"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000036"}]},"cv_name":"molecular_function","definition":"Binding to a prosthetic group, the non-amino acid portion of certain protein molecules. Prosthetic groups may be inorganic or organic and are usually required for the biological activity of the protein.","definition_xrefs":["GOC:ai","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"prosthetic group binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0051192","terms_by_termid":{"GO:0000036":null}}


id: PBO:0076500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 1 receptor member 3","termid":"PBO:0076500"}


id: MONDO:0019576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"maculopapular cutaneous mastocytosis","termid":"MONDO:0019316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"telangiectasia macularis eruptiva perstans","secondary_identifiers":["Orphanet:90389","SCTID:8214000","GARD:19136","MEDGEN:78094","icd11.foundation:444226072","ICD9:448.9","MedDRA:10043192","UMLS:C0263402"],"termid":"MONDO:0019576","xrefs":{"Monarch":{"xref_id":"0019576"}}}


id: GO:0033567
data:
  {"annotated_genes":["SJAG_02690","SJAG_02199","SJAG_04183","SJAG_00618","SJAG_02294","SJAG_05232","SJAG_00198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72648,104496,92983,100986,100952,95394,101844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903461"}]},"cv_name":"biological_process","definition":"The DNA metabolic process, occurring during lagging strand synthesis, by which RNA primers are removed from Okazaki fragments, the resulting gaps filled by DNA polymerization, and the ends ligated to form a continuous strand.","definition_xrefs":["ISBN:0716720094","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"lagging strand elongation","termid":"GO:0006273"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00618":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_04183":null,"SJAG_05232":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"DNA replication, Okazaki fragment processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033567","terms_by_termid":{"GO:1903461":null}}


id: GO:0048290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The switching of activated B cells from IgM biosynthesis to biosynthesis of an IgA isotype, accomplished through a recombination process involving an intrachromosomal deletion between switch regions that reside 5' of the IgM and one of the IgA constant region gene segments in the immunoglobulin heavy chain locus.","definition_xrefs":["ISBN:0781735149","PMID:9186655","PMID:12370374","PMID:2113175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"isotype switching to IgA isotypes","synonyms":[{"name":"class switching to IgA isotypes","type":"exact"},{"name":"isotype switch recombination to IgA isotypes","type":"exact"}],"termid":"GO:0048290"}


id: PBO:0045687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 7","termid":"PBO:0045687"}


id: GO:0051692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of oligosaccharides, molecules with between two and (about) 20 monosaccharide residues connected by glycosidic linkages, as carried out by individual cells.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular oligosaccharide catabolic process (obsolete GO:0051692)","synonyms":[{"name":"cellular oligosaccharide breakdown","type":"exact"},{"name":"cellular oligosaccharide catabolism","type":"exact"},{"name":"cellular oligosaccharide degradation","type":"exact"}],"termid":"GO:0051692"}


id: SO:0001916
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CAGE tag is a sequence tag hat corresponds to 5' ends of mRNA at cap sites, produced by cap analysis gene expression and used to identify transcriptional start sites.","definition_xrefs":["SO:andrewgibson"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tag","termid":"SO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAGE_tag","synonyms":[{"name":"CAGE tag","type":"exact"}],"termid":"SO:0001916"}


id: GO:0120299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histamine + L-glutaminyl-[protein] = 5-histaminyl-L-glutamyl-[protein].","definition_xrefs":["PMID:23797785","PMID:23022564","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"peptide histaminyltransferase activity","secondary_identifiers":["RHEA:66564"],"termid":"GO:0120299"}


id: GO:0006447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the translation of certain mRNAs involved in iron metabolism; regulated by the concentration of iron.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of translational initiation by iron","termid":"GO:0006447"}


id: PBO:0090453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup131","termid":"PBO:0090453"}


id: PBO:0083586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YAR060C has a paralog, YHR212C, that arose from a segmental duplication","termid":"PBO:0083586"}


id: PBO:0089674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein","termid":"PBO:0089674"}


id: PBO:0043770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor COX19","termid":"PBO:0043770"}


id: GO:0033482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-galacturonate, the D-enantiomer of galacturonate, the anion of galacturonic acid.","definition_xrefs":["GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galacturonate biosynthetic process","termid":"GO:0033481"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"},{"relation_name":"is_a","term_name":"D-galacturonate metabolic process","termid":"GO:0046396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"D-galacturonate biosynthetic process","synonyms":[{"name":"D-galacturonate anabolism","type":"exact"},{"name":"D-galacturonate biosynthesis","type":"exact"},{"name":"D-galacturonate formation","type":"exact"},{"name":"D-galacturonate synthesis","type":"exact"}],"termid":"GO:0033482"}


id: MONDO:0012387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by sclerosing bone dysplasia, ichthyosis vulgaris and premature ovarian failure. The bone disorder affects all metaphyseal-diaphyseal regions of the long bones, the skull, and the metacarpals.","definition_xrefs":["Orphanet:75325"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"osteosclerosis-ichthyosis-premature ovarian failure syndrome","secondary_identifiers":["MESH:C536064","GARD:9904","UMLS:C1864942","OMIM:609993","SCTID:722114007","MEDGEN:355875"],"synonyms":[{"name":"osteosclerosis with ichthyosis and POF","type":"related"},{"name":"osteosclerosis with ichthyosis and premature ovarian failure","type":"related"},{"name":"sclerosing dysplasia of bone with ichthyosis and premature ovarian failure","type":"related"},{"name":"sclerosing dysplasia of bone-ichthyosis-premature ovarian failure syndrome","type":"exact"}],"termid":"MONDO:0012387","xrefs":{"Monarch":{"xref_id":"0012387"}}}


id: PBO:0038433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetoacetyl-CoA synthetase pseudogene 1","termid":"PBO:0038433"}


id: PR:Q09828
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leucine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.09","secondary_identifiers":["UniProtKB:Q09828"],"synonyms":[{"name":"LeuRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LARS2","type":"exact"},{"name":"leucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09828"}


id: MONDO:0010779
data:
  {"annotated_genes":["SJAG_MIT04"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86271],"is_not":false,"summary":null,"term":"MONDO:0010779"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"prelingual non-syndromic genetic hearing loss","termid":"MONDO:0016297"},{"relation_name":"excluded_subClassOf","term_name":"postlingual non-syndromic genetic hearing loss","termid":"MONDO:0016298"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":1,"genes_by_uniquename":{"SJAG_MIT04":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial non-syndromic sensorineural hearing loss","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:500008","DOID:0111751","Orphanet:90641","UMLS:C3151897","GARD:16792","MEDGEN:463247"],"synonyms":[{"name":"deafness, isolated, due to mitochondrial transmission","type":"narrow"},{"name":"deafness, nonsyndromic sensorineural, mitochondrial","type":"related"},{"name":"isolated mitochondrial neurosensory deafness","type":"narrow"},{"name":"isolated mitochondrial sensorineural deafness","type":"narrow"},{"name":"mitochondrial non-syndromic neurosensory deafness","type":"narrow"},{"name":"mitochondrial non-syndromic sensorineural deafness","type":"narrow"}],"termid":"MONDO:0010779","terms_by_termid":{"MONDO:0010779":null},"xrefs":{"Monarch":{"xref_id":"0010779"}}}


id: GO:0032752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-3 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-3 production","termid":"GO:0032672"},{"relation_name":"positively_regulates","term_name":"interleukin-3 production","termid":"GO:0032632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-3 production","secondary_identifiers":["GO:0045401"],"synonyms":[{"name":"activation of interleukin-3 production","type":"narrow"},{"name":"positive regulation of IL-3 production","type":"exact"},{"name":"positive regulation of interleukin-3 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-3 production","type":"narrow"},{"name":"up regulation of interleukin-3 production","type":"exact"},{"name":"up-regulation of interleukin-3 production","type":"exact"},{"name":"upregulation of interleukin-3 production","type":"exact"}],"termid":"GO:0032752"}


id: MOD:01602
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue, and an L-methionine residue to S-(L-lysyl)-L-methionine sulfilimine.","definition_xrefs":["PubMed:12011424","PubMed:19729652","PubMed:15951440","RESID:AA0501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"},{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(L-lysyl)-L-methionine sulfilimine","synonyms":[{"name":"(2S)-2-amino-6-([(E)-[(3S)-3-amino-3-carboxypropyl](methyl)-lambda(4)-sulfanylidene]amino)hexanoic acid","type":"exact"},{"name":"(E)-N6-([(3S)-3-amino-3-carboxypropyl](methyl)-lambda(4)-sulfanylidene)-L-lysine","type":"exact"},{"name":"S-(L-lysyl)-L-methionine sulfilimine","type":"exact"},{"name":"S-lysyl-methionine","type":"exact"}],"termid":"MOD:01602"}


id: GO:0098593
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cup shaped specialization of the cytoskeleton that forms a thin layer located just below the apical mass of mature mucin secretory granules in the cytoplasm of goblet cells of the intestinal epithelium. It consists of an orderly network of intermediate filaments and microtubules. Microtubules are arranged vertically, like barrel staves, along the inner aspect of the theta. Intermediate filaments form two networks: an inner, basketlike network and an outer series of circumferential bundles resembling the hoops of a barrel.","definition_xrefs":["PMID:6541604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"goblet cell theca","termid":"GO:0098593"}


id: PBO:0065918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase subunit alpha","termid":"PBO:0065918"}


id: PBO:0003334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3074 family protein","termid":"PBO:0003334"}


id: PBO:0035971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_premeiotic_DNA_replication_during_azygotic_meiotic_cell_cycle","termid":"PBO:0035971"}


id: MONDO:0019156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Angioosteohypotrophic syndrome is a rare, congenital, vascular anomaly syndrome characterized by venous or, on occasion, arterial malformations which lead to soft tissue hypertrophy and bone hypoplasia. Affected limb is generally shortened, highly deformed, painful and edematous and associates bone and muscle hypotrophy. Single parts, or multiple small parts, of limbs are typically affected but more extensive involvement, including complete extremity, shoulder girdle and axilla, has been reported.","definition_xrefs":["Orphanet:75508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"angioosteohypotrophic syndrome","secondary_identifiers":["SCTID:765750001","MEDGEN:1641209","UMLS:C4707561","GARD:18927"],"synonyms":[{"name":"Phlebectatic osteohypoplastic angiodysplasia","type":"exact"},{"name":"Servelle-Martorell syndrome","type":"exact"}],"termid":"MONDO:0019156","xrefs":{"Monarch":{"xref_id":"0019156"}}}


id: GO:0030268
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydromethanopterin + coenzyme F420 + 2 H+ = 5,10-methenyl-5,6,7,8-tetrahydromethanopterin + reduced coenzyme F420.","definition_xrefs":["EC:1.5.98.1","RHEA:16721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors","termid":"GO:0016645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylenetetrahydromethanopterin dehydrogenase activity","secondary_identifiers":["GO:0018536","UM-BBD_reactionID:r0348","MetaCyc:1.5.99.9-RXN","KEGG_REACTION:R04456"],"synonyms":[{"name":"5,10-methylenetetrahydromethanopterin dehydrogenase activity","type":"related"},{"name":"5,10-methylenetetrahydromethanopterin:coenzyme-F420 oxidoreductase activity","type":"related"},{"name":"N(5),N(10)-methylenetetrahydromethanopterin dehydrogenase activity","type":"related"}],"termid":"GO:0030268"}


id: PBO:0084772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ornithine acetyltransferase; catalyzes the fifth step in arginine biosynthesis; also possesses acetylglutamate synthase activity, regenerates acetylglutamate while forming ornithine","termid":"PBO:0084772"}


id: PBO:0034793
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this gene product was previously annotated to the NADH dehydrogenase of the mitochondrial respiratory chain complex I. This mapping was removed because fission yeast lacks the remaining 40 subunits found in mammals (PMID:1518044).","termid":"PBO:0034793"}


id: GO:0102321
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: biphenyl-2,2'-diol + O2 + NADH + H+ = biphenyl-2,2',3-triol + H2O + NAD.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,2'-hydroxybiphenyl monooxygenase activity (obsolete GO:0102321)","termid":"GO:0102321"}


id: PBO:0067353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 451, pseudogene","termid":"PBO:0067353"}


id: MONDO:0002001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease of cellular proliferation (obsolete MONDO:0002001)","termid":"MONDO:0002001","xrefs":{"Monarch":{"xref_id":"0002001"}}}


id: PR:O94683
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosomal RNA-processing protein 7 homolog A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13191:SF0","OMA:SCHPO03610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA-processing protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.17","secondary_identifiers":["UniProtKB:O94683"],"synonyms":[{"name":"Spom972h-RRP7A","type":"exact"}],"termid":"PR:O94683"}


id: GO:0075525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which occurs as part of viral mRNA translation which allows expression of a downstream open reading frame (ORF) in a dicistronic mRNA. In this process, ribosomes translate the upstream ORF but following termination, a proportion of 40S subunits remain tethered to the mRNA and go on to re-initiate translation at the start codon of the downstream ORF.","definition_xrefs":["VZ:858","GOC:bf","GOC:ch","GOC:jl","PMID:18631147","PMID:18824510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral translational termination-reinitiation","synonyms":[{"name":"termination reinitiation involved in viral translation","type":"exact"},{"name":"viral translation involving termination re-initiation","type":"exact"},{"name":"viral translation involving termination-reinitiation","type":"exact"},{"name":"viral translation involving translational stop-start","type":"exact"}],"termid":"GO:0075525"}


id: GO:0048881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mechanosensory lateral line system over time, from its formation to the mature structure. The mechanosensory lateral line system consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head and body of all fishes and most amphibians. The neuromasts are innervated by several lateral line nerves, which project primarily to the hindbrain. The mechanosensory lateral line system is stimulated by local water displacements and vibrations, and detects propulsion of the fish through the water, as well as facilitating shoaling, prey capture, and predator and obstacle avoidance.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line system development","termid":"GO:0048925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mechanosensory lateral line system development","synonyms":[{"name":"LL system development","type":"exact"}],"termid":"GO:0048881"}


id: PBO:0027730
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_calcium_ion","termid":"PBO:0027730"}


id: GO:0031317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of two membrane proteins and one extracytoplasmic solute receptor. Such transporters transport a variety of substrates without direct ATP power, instead using energy from ion gradients.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tripartite ATP-independent periplasmic transporter complex","synonyms":[{"name":"TRAP transporter complex","type":"exact"},{"name":"TRAP-T transporter complex","type":"exact"}],"termid":"GO:0031317"}


id: GO:0009087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"methionine metabolic process","termid":"GO:0006555"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"methionine catabolic process","secondary_identifiers":["UM-BBD_pathwayID:met"],"synonyms":[{"name":"methionine breakdown","type":"exact"},{"name":"methionine catabolism","type":"exact"},{"name":"methionine degradation","type":"exact"}],"termid":"GO:0009087"}


id: GO:0071747
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An IgA immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of an IgA isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["PMID:16362985","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor complex","termid":"GO:0019815"},{"relation_name":"is_a","term_name":"IgA immunoglobulin complex","termid":"GO:0071745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"IgA B cell receptor complex","synonyms":[{"name":"membrane-bound IgA","type":"narrow"},{"name":"membrane-bound IgA1","type":"narrow"},{"name":"membrane-bound IgA2","type":"narrow"},{"name":"surface IgA","type":"narrow"},{"name":"surface IgA1","type":"narrow"},{"name":"surface IgA2","type":"narrow"}],"termid":"GO:0071747"}


id: PBO:0062567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AF member 1 pseudogene","termid":"PBO:0062567"}


id: PBO:0061298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPC intracellular cholesterol transporter 1","termid":"PBO:0061298"}


id: PBO:0111427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Exo2","termid":"PBO:0111427"}


id: FYPO:0003540
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is decreased (i.e. occurs to a lower extent) in one or more specific regions of the chromosomes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing","termid":"FYPO:0003024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"decreased regional homologous chromosome pairing","synonyms":[{"name":"decreased localised homologous chromosome pairing","type":"exact"},{"name":"decreased regional homologous chromosome pairing at meiosis","type":"exact"},{"name":"decreased regional synapsis","type":"exact"},{"name":"reduced regional homologous chromosome pairing","type":"exact"},{"name":"regionally decreased homologous chromosome pairing","type":"exact"}],"termid":"FYPO:0003540"}


id: GO:0060011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of Sertoli cells, resulting in the expansion of the Sertoli cell population. A Sertoli cell is a supporting cell projecting inward from the basement membrane of seminiferous tubules.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"male gonad development","termid":"GO:0008584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Sertoli cell proliferation","termid":"GO:0060011"}


id: PBO:0041143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 like 4 pseudogene 2","termid":"PBO:0041143"}


id: GO:0035419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase in the context of an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK activity involved in innate immune response (obsolete GO:0035419)","termid":"GO:0035419"}


id: GO:0033903
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the endohydrolysis of 1,3- or 1,4-linkages in beta-D-glucans when the glucose residue whose reducing group is involved in the linkage to be hydrolysed is itself substituted at C-3.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endo-1,3(4)-beta-glucanase activity (obsolete GO:0033903)","synonyms":[{"name":"endo-1,3(4)-beta-glucanase activity","type":"exact"}],"termid":"GO:0033903"}


id: GO:1900233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of single-species biofilm formation on inanimate substrate.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of single-species biofilm formation","termid":"GO:1900192"},{"relation_name":"is_a","term_name":"regulation of single-species biofilm formation on inanimate substrate","termid":"GO:1900231"},{"relation_name":"positively_regulates","term_name":"single-species biofilm formation on inanimate substrate","termid":"GO:0044011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of single-species biofilm formation on inanimate substrate","synonyms":[{"name":"activation of single-species biofilm formation on inanimate substrate","type":"narrow"},{"name":"up regulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"up-regulation of single-species biofilm formation on inanimate substrate","type":"exact"},{"name":"upregulation of single-species biofilm formation on inanimate substrate","type":"exact"}],"termid":"GO:1900233"}


id: MONDO:0017968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"46,XY ovotesticular disorder of sex development is a rare, genetic disorder of sex development characterized by either the coexistence of both male and female reproductive gonads or, more frequently, by the presence of one or both gonads containing a mixture of both testicular and ovarian tissue (ovotestes) in an individual with a normal male 46, XY karyotype. External genitalia are usually ambiguous, but can range from normal male to normal female and if a uterus and/or fallopian tubes are present, they are generally hypoplastic. Cryptorchidism, hypospadias, infertility and increased risk of gonadal tumors are frequently associated.","definition_xrefs":["Orphanet:325345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"46,XY ovotesticular disorder of sex development","secondary_identifiers":["UMLS:C2697358","SCTID:763683004","MEDGEN:394582","GARD:21469"],"synonyms":[{"name":"46,XY ovotesticular DSD","type":"exact"}],"termid":"MONDO:0017968","xrefs":{"Monarch":{"xref_id":"0017968"}}}


id: PBO:0042999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromogranin B","termid":"PBO:0042999"}


id: GO:0032608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-beta due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:15546383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interferon-beta production","secondary_identifiers":["GO:0035546","GO:0045350"],"synonyms":[{"name":"IFN-beta production","type":"exact"},{"name":"IFNB production","type":"exact"},{"name":"interferon-beta biosynthetic process","type":"narrow"},{"name":"interferon-beta secretion","type":"narrow"}],"termid":"GO:0032608"}


id: MONDO:0003893
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign epithelial neoplasm arising from the rete testis.","definition_xrefs":["NCIT:C39956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rete testis neoplasm","termid":"MONDO:0003562"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rete testis adenoma","secondary_identifiers":["DOID:6483","MEDGEN:308161","UMLS:C1514910"],"synonyms":[{"name":"adenoma, rete testis, benign","type":"exact"},{"name":"rete testis adenoma","type":"exact"}],"termid":"MONDO:0003893","xrefs":{"Monarch":{"xref_id":"0003893"}}}


id: PATO:0000867
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000867 swallowing reflex value (obsolete PATO:0000867)","termid":"PATO:0000867"}


id: GO:0048937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a lateral line glial cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"part_of","term_name":"lateral line nerve glial cell differentiation","termid":"GO:0048895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line nerve glial cell development","termid":"GO:0048937"}


id: GO:0061260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the mesangial cells of the mesonephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in mesonephros development","termid":"GO:0061208"},{"relation_name":"is_a","term_name":"mesangial cell differentiation","termid":"GO:0072007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesangial cell differentiation","termid":"GO:0061260"}


id: GO:0022411
data:
  {"annotated_genes":["SJAG_02414","SJAG_02812","SJAG_02189","SJAG_02718","SJAG_01518","SJAG_01653","SJAG_03646","SJAG_00642","SJAG_05025","SJAG_03052","SJAG_03126","SJAG_03232","SJAG_00723","SJAG_00680","SJAG_02601","SJAG_00308","SJAG_05221","SJAG_02746","SJAG_02624","SJAG_04312","SJAG_02100","SJAG_01297","SJAG_02704","SJAG_05000","SJAG_03106","SJAG_05265","SJAG_02699","SJAG_00840","SJAG_01252","SJAG_00898","SJAG_01497","SJAG_04862","SJAG_04841","SJAG_03380","SJAG_02336","SJAG_01224","SJAG_01171","SJAG_03345","SJAG_03428","SJAG_00279","SJAG_04909","SJAG_03301","SJAG_03444","SJAG_04578","SJAG_00667","SJAG_03658","SJAG_03189","SJAG_05296","SJAG_05001","SJAG_02700","SJAG_01894","SJAG_01888","SJAG_03025","SJAG_02314","SJAG_03949","SJAG_06309","SJAG_01696","SJAG_01017","SJAG_01074","SJAG_02433","SJAG_02096","SJAG_04283","SJAG_00206","SJAG_01774","SJAG_00338","SJAG_02560","SJAG_00330","SJAG_04038","SJAG_00188","SJAG_00286","SJAG_00597","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70363,73781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[76683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[72675,70941,75850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097352"},{"annotations":[94959],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[76055,80536,79503,92654],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[114796],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[80067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072318"},{"annotations":[117887,96816,109531,116416,107536,95143,74174,109530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002184"},{"annotations":[102663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031025"},{"annotations":[62115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903259"},{"annotations":[102285,111693,89418,102286,108435,88598,94351,100487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"},{"annotations":[118551,89945,98951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007019"},{"annotations":[102410,98980,95834,96269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070126"},{"annotations":[110833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007077"},{"annotations":[104004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140516"},{"annotations":[75852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051228"},{"annotations":[74770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034496"},{"annotations":[90388,117292,97415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006337"},{"annotations":[108632,104243],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070462"},{"annotations":[97955],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1901098"},{"annotations":[102191],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031117"},{"annotations":[112343],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904595"},{"annotations":[68882,76830,66631],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045905"},{"annotations":[100489,90058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030994"},{"annotations":[94167,104007],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905557"},{"annotations":[74432],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006449"},{"annotations":[75722,78553,103473,116476,70250,64552,105993,76960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072344"},{"annotations":[105055,71060,103954,74891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032790"},{"annotations":[57503,76732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035494"},{"annotations":[78883,75304,104866,88097,57286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000390"},{"annotations":[62220,77857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006415"}]},"cv_name":"biological_process","definition":"A cellular process that results in the breakdown of a cellular component.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component 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component disassembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0071845"],"synonyms":[{"name":"cell structure disassembly","type":"exact"},{"name":"cellular component disassembly at cellular level","type":"exact"}],"termid":"GO:0022411","terms_by_termid":{"GO:0000390":null,"GO:0002184":null,"GO:0006337":null,"GO:0006415":null,"GO:0006449":null,"GO:0007019":null,"GO:0007077":null,"GO:0016240":null,"GO:0030042":null,"GO:0030994":null,"GO:0031025":null,"GO:0031117":null,"GO:0032790":null,"GO:0034496":null,"GO:0035494":null,"GO:0045905":null,"GO:0051016":null,"GO:0051228":null,"GO:0060172":null,"GO:0070126":null,"GO:0070462":null,"GO:0072318":null,"GO:0072344":null,"GO:0097352":null,"GO:0140516":null,"GO:0140708":null,"GO:1901098":null,"GO:1903259":null,"GO:1904541":null,"GO:1904595":null,"GO:1905557":null}}


id: PBO:0030892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_oxidative_stress_during_vegetative_growth","termid":"PBO:0030892"}


id: GO:0047195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sterol + 1,2-diacylglycerol = sterol ester + acylglycerol.","definition_xrefs":["MetaCyc:2.3.1.73-RXN","EC:2.3.1.73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"diacylglycerol-sterol O-acyltransferase activity","secondary_identifiers":["RHEA:13301"],"synonyms":[{"name":"1,2-diacyl-sn-glycerol:sterol O-acyltransferase activity","type":"related"},{"name":"1,2-diacyl-sn-glycerol:sterol acyl transferase activity","type":"related"}],"termid":"GO:0047195"}


id: PBO:0085288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal ubiquitin conjugating enzyme; required for peroxisomal matrix protein import and peroxisome biogenesis","termid":"PBO:0085288"}


id: GO:0043484
data:
  {"annotated_genes":["SJAG_02018","SJAG_01799","SJAG_02058","SJAG_04949","SJAG_01169","SJAG_04782","SJAG_03279","SJAG_01919","SJAG_01040","SJAG_00996","SJAG_04863","SJAG_03214","SJAG_01511"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118814,89800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[92490,74435,75691,111303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"},{"annotations":[65252,111908,105845,93221,113451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000381"},{"annotations":[98898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905744"},{"annotations":[94072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048024"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of RNA splicing, the process of removing sections of the primary RNA transcript to remove sequences not present in the mature form of the RNA and joining the remaining sections to form the mature form of the RNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"RNA splicing","termid":"GO:0008380"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00996":null,"SJAG_01040":null,"SJAG_01169":null,"SJAG_01511":null,"SJAG_01799":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null,"SJAG_03214":null,"SJAG_03279":null,"SJAG_04782":null,"SJAG_04863":null,"SJAG_04949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of RNA splicing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043484","terms_by_termid":{"GO:0000381":null,"GO:0048024":null,"GO:0048026":null,"GO:1905744":null,"GO:1905746":null}}


id: FYPO:0004146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of pyridoxine:NADP 4-dehydrogenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal pyridoxine:NADP 4-dehydrogenase activity","termid":"FYPO:0004145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased pyridoxine:NADP 4-dehydrogenase activity","synonyms":[{"name":"reduced pyridoxine:NADP 4-dehydrogenase activity","type":"exact"}],"termid":"FYPO:0004146"}


id: PBO:0066950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 252","termid":"PBO:0066950"}


id: PBO:0082623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of both the Rpd3S and Rpd3L histone deacetylase complexes; negative regulator of meiosis; required for repression of a subset of meiotic genes during vegetative growth, binding of histone deacetylase Rpd3p required for activity, contains a NEE box and a WD repeat motif; homologous with Wtm1p; UME1 has a paralog, WTM2, that arose from the whole genome duplication","termid":"PBO:0082623"}


id: PBO:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biological role inferred","termid":"PBO:0000002"}


id: MONDO:1012361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"yellow-semen syndrome, non-human animal","termid":"MONDO:1011920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow-semen syndrome, turkey","secondary_identifiers":["OMIA:001304-9103"],"termid":"MONDO:1012361","xrefs":{"Monarch":{"xref_id":"1012361"}}}


id: GO:0070899
data:
  {"annotated_genes":["SJAG_04113","SJAG_04367","SJAG_02302","SJAG_00186","SJAG_00358"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76563,93126],"is_not":false,"summary":null,"term":"GO:0070899"},{"annotations":[117351,94595,107246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"}]},"cv_name":"biological_process","definition":"The process in which a uridine in position 34 of a mitochondrial tRNA is post-transcriptionally modified.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble uridine modification","termid":"GO:0002098"},{"relation_name":"is_a","term_name":"mitochondrial tRNA modification","termid":"GO:0070900"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00358":null,"SJAG_02302":null,"SJAG_04113":null,"SJAG_04367":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0140053","GO:0010467"],"is_obsolete":false,"name":"mitochondrial tRNA wobble uridine modification","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070899","terms_by_termid":{"GO:0070899":null,"GO:1990799":null}}


id: GO:0018929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methyl fluoride, fluorine-substituted methane, a gaseous halogenated hydrocarbon that has been investigated as an inhibitor of methanotrophy and nitrification in soils.","definition_xrefs":["UM-BBD_pathwayID:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"},{"relation_name":"is_a","term_name":"organofluorine metabolic process","termid":"GO:0090346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methyl fluoride metabolic process","synonyms":[{"name":"methyl fluoride metabolism","type":"exact"}],"termid":"GO:0018929"}


id: GO:1902219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to osmotic stress.","definition_xrefs":["GOC:TermGenie","GOC:BHF","PMID:14569084","GOC:mtg_apoptosis","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:1902218"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:0008627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"exact"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to osmotic stress","type":"narrow"}],"termid":"GO:1902219"}


id: GO:0032897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of viral transcription.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral transcription","termid":"GO:0046782"},{"relation_name":"is_a","term_name":"negative regulation of viral process","termid":"GO:0048525"},{"relation_name":"negatively_regulates","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of viral transcription","synonyms":[{"name":"down regulation of viral transcription","type":"exact"},{"name":"down-regulation of viral transcription","type":"exact"},{"name":"downregulation of viral transcription","type":"exact"},{"name":"inhibition of viral transcription","type":"narrow"}],"termid":"GO:0032897"}


id: GO:0050928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemotaxis","termid":"GO:0050922"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"negatively_regulates","term_name":"positive chemotaxis","termid":"GO:0050918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis","synonyms":[{"name":"down regulation of positive chemotaxis","type":"exact"},{"name":"down-regulation of positive chemotaxis","type":"exact"},{"name":"downregulation of positive chemotaxis","type":"exact"},{"name":"inhibition of positive chemotaxis","type":"narrow"}],"termid":"GO:0050928"}


id: PBO:0068344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 115","termid":"PBO:0068344"}


id: PBO:0012580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 1 (predicted)","termid":"PBO:0012580"}


id: GO:0099073
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle derived via budding from a mitochondrion. These vesicles often contain inner membrane and, much more rarely, cristae.","definition_xrefs":["PMID:18207745","GOC:pad","GOC:bc","GOC:PARL-UCL","PMID:20619655","PMID:22226745","PMID:23300790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitochondrion-derived vesicle","synonyms":[{"name":"MDV","type":"exact"}],"termid":"GO:0099073"}


id: SO:0001431
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is not transcribed under normal conditions and is not critical to normal cellular functioning.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"cryptic","termid":"SO:0000976"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_gene","synonyms":[{"name":"cryptic gene","type":"exact"}],"termid":"SO:0001431"}


id: MONDO:0015976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyper-IgM syndrome without susceptibility to opportunistic infections (obsolete MONDO:0015976)","secondary_identifiers":["Orphanet:183666"],"synonyms":[{"name":"HIGM without susceptibility to opportunistic infections","type":"exact"}],"termid":"MONDO:0015976","xrefs":{"Monarch":{"xref_id":"0015976"}}}


id: GO:0072206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the juxtaglomerular apparatus in the metanephros over time, from its formation to the mature structure. The juxtaglomerular apparatus is an anatomical structure which consists of juxtaglomerular cells, extraglomerular mesangial cells and the macula densa. The juxtaglomerular apparatus lies adjacent to the glomerulus and regulates kidney function by maintaining the blood flow to the kidney and the filtration rate.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerular apparatus development","termid":"GO:0072051"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric juxtaglomerular apparatus development","termid":"GO:0072206"}


id: FYPO:0005157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype characterized by normal ascus morphology, i.e. the size, shape, and structure of the ascus are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal ascus morphology","termid":"FYPO:0005157"}


id: MONDO:0012384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial panic disorder","termid":"MONDO:0031240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"panic disorder 3","secondary_identifiers":["OMIM:609985","MEDGEN:400645","UMLS:C1864946"],"synonyms":[{"name":"Pand3","type":"related"},{"name":"panic disorder 3","type":"exact"},{"name":"panic disorder susceptibility locus, chromosome 4Q-related","type":"related"},{"name":"panic disorder type 3","type":"exact"}],"termid":"MONDO:0012384","xrefs":{"Monarch":{"xref_id":"0012384"}}}


id: SO:0001904
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding RNA transcribed from the opposite DNA strand compared with other transcripts and overlap in part with sense RNA.","definition_xrefs":["PMID:19638999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antisense_RNA","termid":"SO:0000644"},{"relation_name":"is_a","term_name":"lncRNA","termid":"SO:0001877"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense_lncRNA","synonyms":[{"name":"antisense lncRNA","type":"related"},{"name":"natural antisense transcript","type":"exact"}],"termid":"SO:0001904"}


id: PBO:0084761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial methionyl-tRNA synthetase (MetRS); functions as a monomer in mitochondrial protein synthesis; functions similarly to cytoplasmic MetRS although the cytoplasmic form contains a zinc-binding domain not found in Msm1p","termid":"PBO:0084761"}


id: PBO:0065701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine rich element binding protein G","termid":"PBO:0065701"}


id: GO:0033919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal (1->3)-alpha-D-glucosidic links in 1,3-alpha-D-glucans.","definition_xrefs":["EC:3.2.1.84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glucan 1,3-alpha-glucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.84-RXN","Reactome:R-HSA-9683663","Reactome:R-HSA-532667","Reactome:R-HSA-548890","Reactome:R-HSA-9694364"],"synonyms":[{"name":"1,3-alpha-D-glucan 3-glucohydrolase activity","type":"related"},{"name":"exo-1,3-alpha-glucanase activity","type":"related"}],"termid":"GO:0033919"}


id: PBO:0072824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAMM50 sorting and assembly machinery component","termid":"PBO:0072824"}


id: PBO:0028438
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_filipin","termid":"PBO:0028438"}


id: PBO:0047187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 204 member C, pseudogene","termid":"PBO:0047187"}


id: GO:0003379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of anisotropic intracellular organization that contributes to the self-propelled directed movement of an ameboid cell taking part in gastrulation.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity involved in ameboidal cell migration","termid":"GO:0003365"},{"relation_name":"part_of","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of cell polarity involved in gastrulation cell migration","termid":"GO:0003379"}


id: MONDO:0007709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematuria, benign familial","termid":"MONDO:0957317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematuria, benign familial, 1","secondary_identifiers":["OMIM:141200"],"synonyms":[{"name":"BFH","type":"related"},{"name":"hematuria, benign familial","type":"broad"},{"name":"hematuria, familial benign","type":"broad"},{"name":"thin membrane nephropathy","type":"related"},{"name":"thin-basement-membrane nephropathy","type":"related"}],"termid":"MONDO:0007709","xrefs":{"Monarch":{"xref_id":"0007709"}}}


id: MOD:00031
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-selenocysteine, a natural pretranslational modification.","definition_xrefs":["PubMed:2037562","PubMed:6217842","PubMed:1066676","PubMed:6714945","PubMed:2963330","PubMed:4734725","PubMed:10523135","ChEBI:30000","RESID:AA0022","PubMed:6076213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium containing residue","termid":"MOD:00745"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"natural, non-standard encoded residue","termid":"MOD:00868"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-selenocysteine residue","synonyms":[{"name":"(2R)-2-amino-3-selanylpropanoic acid","type":"exact"},{"name":"2-azanyl-3-selanylpropanoic acid","type":"exact"},{"name":"3-selenylalanine","type":"exact"},{"name":"L-selenocysteine","type":"exact"},{"name":"NON_STD Selenocysteine","type":"exact"},{"name":"SeCys","type":"exact"},{"name":"Sec","type":"exact"},{"name":"selenium cysteine","type":"exact"}],"termid":"MOD:00031"}


id: MONDO:0800413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisocial behavior, susceptibility to","secondary_identifiers":["UMLS:C4310831","MEDGEN:934798"],"termid":"MONDO:0800413","xrefs":{"Monarch":{"xref_id":"0800413"}}}


id: GO:1900314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of maltohexaose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hexasaccharide transport","termid":"GO:1900299"},{"relation_name":"is_a","term_name":"regulation of maltohexaose transport","termid":"GO:1900312"},{"relation_name":"positively_regulates","term_name":"maltohexaose transport","termid":"GO:2001103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of maltohexaose transport","synonyms":[{"name":"activation of maltohexaose transport","type":"narrow"},{"name":"up regulation of maltohexaose transport","type":"exact"},{"name":"up-regulation of maltohexaose transport","type":"exact"},{"name":"upregulation of maltohexaose transport","type":"exact"}],"termid":"GO:1900314"}


id: PBO:0049502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 9, pseudogene","termid":"PBO:0049502"}


id: PBO:0070151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 65 pseudogene","termid":"PBO:0070151"}


id: GO:0008224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, Gram-positive bacterial cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Gram-positive antibacterial peptide activity (obsolete GO:0008224)","synonyms":[{"name":"Gram-positive antibacterial peptide activity","type":"exact"}],"termid":"GO:0008224"}


id: PBO:0046394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythrocyte membrane protein band 4.1 like 1","termid":"PBO:0046394"}


id: GO:0140479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A biosynthetic process that results in the formation of ergothioneine from histidine via a set of steps including the hercynylcysteine sulfoxide synthase reaction, which converts N-alpha,N-alpha,N-alpha-trimethyl-L-histidine directly to hercynylcysteine sulfoxide.","definition_xrefs":["PMID:22209968","PMID:24828577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ergothioneine biosynthetic process","termid":"GO:0052699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ergothioneine biosynthesis from histidine via hercynylcysteine sulfoxide synthase","termid":"GO:0140479"}


id: PBO:0005539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec7","termid":"PBO:0005539"}


id: PBO:0070747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 3","termid":"PBO:0070747"}


id: MONDO:0002312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mycosis that arises from infection in an immunologically compromised host.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"systemic mycosis","termid":"MONDO:0000256"},{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opportunistic mycosis","secondary_identifiers":["ICD9:118","SCTID:78999002","UMLS:C0029119","ICD9:117.9","DOID:2473","MEDGEN:508004"],"synonyms":[{"name":"opportunistic mycoses","type":"exact"},{"name":"opportunistic systemic mycoses","type":"narrow"}],"termid":"MONDO:0002312","xrefs":{"Monarch":{"xref_id":"0002312"}}}


id: PBO:0001620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase (predicted)","termid":"PBO:0001620"}


id: GO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cyclin-dependent protein kinase (CDK) complex found in the cytoplasm.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic cyclin-dependent protein kinase holoenzyme complex","synonyms":[{"name":"CDK holoenzyme","type":"broad"}],"termid":"GO:0000308"}


id: PBO:0003751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EST1 family protein (predicted)","termid":"PBO:0003751"}


id: PBO:0055107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2525","termid":"PBO:0055107"}


id: PBO:0088663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated ER to Golgi transport vesicle protein Svp26","termid":"PBO:0088663"}


id: PBO:0051547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 7","termid":"PBO:0051547"}


id: MONDO:0008938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Early onset cerebellar ataxia with retained reflexes (EOCARR) or Harding ataxia is a cerebellar ataxia characterized by the progressive association of a cerebellar and pyramidal syndrome with progressive cerebellar ataxia, brisk tendon reflexes, and sometimes profound sensory loss.","definition_xrefs":["Orphanet:1177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive degenerative and progressive cerebellar ataxia","termid":"MONDO:0020046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"early-onset cerebellar ataxia with retained tendon reflexes","secondary_identifiers":["GARD:2600","OMIM:212895","SCTID:230228004","UMLS:C0393520","ICD9:334.3","MEDGEN:140726","MESH:C535633"],"synonyms":[{"name":"EOCA","type":"exact"},{"name":"EOCARR","type":"exact"},{"name":"Harding ataxia","type":"exact"},{"name":"ataxia, harding type","type":"related"},{"name":"cerebellar ataxia early onset with retained tendon reflex","type":"related"},{"name":"cerebellar ataxia, early-onset, with retained tendon reflexes","type":"related"}],"termid":"MONDO:0008938","xrefs":{"Monarch":{"xref_id":"0008938"}}}


id: PBO:0013470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double strand break localizing protein Dbl6","termid":"PBO:0013470"}


id: PBO:0089735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin-beta family nuclear import receptor Los1","termid":"PBO:0089735"}


id: GO:1990128
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein-DNA complex involved in replication initiation at the origin of replication.","definition_xrefs":["GOC:bhm","PMID:21856207"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-primosome complex involved in replication initiation (obsolete GO:1990128)","synonyms":[{"name":"pre-primosome complex involved in replication initiation","type":"exact"}],"termid":"GO:1990128"}


id: GO:0051355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events contributing to equilibrioception by which an organism senses the position, location, orientation, and movement of the body and its parts. Proprioception plays an important role in the ability of an organism to perceive its orientation with respect to gravity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proprioception","termid":"GO:0019230"},{"relation_name":"part_of","term_name":"equilibrioception","termid":"GO:0050957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proprioception involved in equilibrioception","synonyms":[{"name":"equilibrioception by proprioception","type":"exact"},{"name":"perception of orientation with respect to gravity by proprioception","type":"exact"},{"name":"proprioception during equilibrioception","type":"related"}],"termid":"GO:0051355"}


id: PBO:0079389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 3 class III pseudogene 1","termid":"PBO:0079389"}


id: GO:0009128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine nucleoside monophosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate catabolic process","termid":"GO:0009125"},{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside monophosphate catabolic process","synonyms":[{"name":"purine nucleoside monophosphate breakdown","type":"exact"},{"name":"purine nucleoside monophosphate catabolism","type":"exact"},{"name":"purine nucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009128"}


id: PBO:0003270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase involved in endocytosis (predicted)","termid":"PBO:0003270"}


id: GO:0032903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of nerve growth factor (NGF).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotrophin production","termid":"GO:0032899"},{"relation_name":"regulates","term_name":"nerve growth factor production","termid":"GO:0032902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nerve growth factor production","synonyms":[{"name":"regulation of NGF production","type":"exact"},{"name":"regulation of beta-nerve growth factor production","type":"exact"}],"termid":"GO:0032903"}


id: MONDO:0016955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 4q duplication is a chromosome abnormality characterized by an extra copy (duplication) of genetic material on the long arm (q) of chromosome 4. The severity and specific symptoms depend on the size and location of the duplication, and which genes are involved. Features that have been described in some people with chromosome 4q duplication include developmental delay, intellectual disability, behavioral problems, birth defects, and distinctive facial features. Most cases are inherited from an unaffected parent with a chromosomal rearrangement called a balanced translocation. Some cases are not inherited and occur sporadically. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 4","termid":"MONDO:0016924"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 4","secondary_identifiers":["icd11.foundation:959729903","MESH:C537644","Orphanet:262860","UMLS:C0795812","GARD:5347","MEDGEN:162874","DOID:0111159"],"synonyms":[{"name":"4q duplication","type":"related"},{"name":"4q trisomy","type":"related"},{"name":"Duplication 4q","type":"related"},{"name":"Duplication 4q syndrome, partial","type":"exact"},{"name":"chromosome 4, partial trisomy 4q","type":"exact"},{"name":"chromosome 4q duplication","type":"related"},{"name":"distal 4q trisomy","type":"exact"},{"name":"dup(4q) syndrome, partial","type":"exact"},{"name":"partial duplication of chromosome 4q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 4","type":"exact"},{"name":"partial trisomy 4q","type":"related"},{"name":"partial trisomy 4q syndrome","type":"exact"},{"name":"partial trisomy distal 4q","type":"related"},{"name":"partial trisomy of chromosome 4q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 4","type":"exact"},{"name":"trisomy 4q","type":"related"}],"termid":"MONDO:0016955","xrefs":{"Monarch":{"xref_id":"0016955"}}}


id: PBO:0047368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 21, pseudogene","termid":"PBO:0047368"}


id: PATO:0001331
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality inhering in a bearer by virtue of the bearer's having odour.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odor","termid":"PATO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorous","termid":"PATO:0001331"}


id: GO:0140542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of a piRNA.","definition_xrefs":["PMID:28847004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"piRNA transcription","termid":"GO:0140541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"regulation of piRNA transcription","termid":"GO:0140542"}


id: MONDO:0004701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign protruding lesion arising either from the endometrial cavity (endometrial polyp) or the endocervix (endocervical polyp). It may occasionally recur following complete resection.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine polyp","secondary_identifiers":["MEDGEN:57628","NCIT:C3662","SCTID:11314008","EFO:0009484","ICD10CM:N84.0","ICD9:621.0","DOID:9042","UMLS:C0156369"],"synonyms":[{"name":"endometrial/uterine polyp","type":"exact"},{"name":"polyp of corpus uteri","type":"exact"},{"name":"polyp of endometrium","type":"narrow"},{"name":"polyp of the uterus","type":"exact"},{"name":"polyp of uterus","type":"exact"},{"name":"polyp, uterus","type":"exact"},{"name":"uterine polyp","type":"exact"},{"name":"uterus polyp","type":"exact"}],"termid":"MONDO:0004701","xrefs":{"Monarch":{"xref_id":"0004701"}}}


