# terms

id: PBO:0002748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn502","termid":"PBO:0002748"}


id: PBO:0089677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII cargo receptor subunit Sec23a","termid":"PBO:0089677"}


id: FYPO:0004775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-serine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular serine level","termid":"FYPO:0001728"},{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased vacuolar serine level","synonyms":[{"name":"increased level of serine in vacuole","type":"exact"},{"name":"increased vacuolar L-serine level","type":"exact"},{"name":"increased vacuolar serine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar serine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004775"}


id: PBO:0038835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 1","termid":"PBO:0038835"}


id: PBO:0044256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X3-C motif chemokine ligand 1","termid":"PBO:0044256"}


id: GO:0050644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-4-coumarate + UDP-D-glucose = 4'-O-beta-D-glucosyl-cis-4-coumarate + H+ + UDP.","definition_xrefs":["RHEA:13129","EC:2.4.1.209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"cis-p-coumarate glucosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.209-RXN","KEGG_REACTION:R05324"],"synonyms":[{"name":"UDP-glucose:cis-p-coumarate beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0050644"}


id: GO:0002774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of the binding of the Fc portion of an immunoglobulin by an Fc receptor capable of inhibiting an immune effector process contributing to an immune response. The Fc portion of an immunoglobulin is its C-terminal constant region.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting cell surface receptor signaling pathway","termid":"GO:0002767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Fc receptor mediated inhibitory signaling pathway","synonyms":[{"name":"Fc receptor mediated inhibitory signalling pathway","type":"exact"},{"name":"Fc-receptor mediated inhibitory signaling pathway","type":"exact"}],"termid":"GO:0002774"}


id: GO:0030830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cGMP catabolic process (obsolete GO:0030830)","synonyms":[{"name":"down regulation of cGMP catabolic process","type":"exact"},{"name":"down-regulation of cGMP catabolic process","type":"exact"},{"name":"downregulation of cGMP catabolic process","type":"exact"},{"name":"inhibition of cGMP catabolic process","type":"narrow"},{"name":"negative regulation of cGMP breakdown","type":"exact"},{"name":"negative regulation of cGMP catabolism","type":"exact"},{"name":"negative regulation of cGMP degradation","type":"exact"}],"termid":"GO:0030830"}


id: MONDO:0015226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with limb malformations as a major feature (obsolete MONDO:0015226)","secondary_identifiers":["Orphanet:109009"],"termid":"MONDO:0015226","xrefs":{"Monarch":{"xref_id":"0015226"}}}


id: GO:0071584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of zinc ion import.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of zinc ion transmembrane import","termid":"GO:0071581"},{"relation_name":"is_a","term_name":"negative regulation of zinc ion transmembrane transport","termid":"GO:0071583"},{"relation_name":"negatively_regulates","term_name":"zinc ion import across plasma membrane","termid":"GO:0071578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of zinc ion transmembrane import","termid":"GO:0071584"}


id: PBO:0061765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase antizyme 1","termid":"PBO:0061765"}


id: FYPO:0000263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which regulation of translation in response to stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress","termid":"FYPO:0000162"},{"relation_name":"is_a","term_name":"translation regulation phenotype","termid":"FYPO:0000289"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000298"],"is_obsolete":false,"name":"abnormal regulation of translation in response to stress","synonyms":[{"name":"protein synthesis after stress, defective","type":"related"}],"termid":"FYPO:0000263"}


id: PBO:0082476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase catalytic subunit; role in nutrient-stimulated growth via Ras-cAMP signaling; inhibited by regulatory subunit Bcy1p in cAMPs absence; phosphorylates and inhibits Whi3p to promote G1/S phase passage; phosphorylates Nej1p to regulate nonhomologous end joining (NHEJ); impairs mitochondrial import of pre-Tom40p via phosphorylation under non-respiratory conditions; partially redundant with Tpk2p and Tpk3p; human homolog PRKACB regulates NHEJ via NHEJ1 phosphorylation","termid":"PBO:0082476"}


id: MONDO:0012266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any preeclampsia in which the cause of the disease is a mutation in the STOX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preeclampsia","termid":"MONDO:0005081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preeclampsia/eclampsia 4","secondary_identifiers":["OMIM:609404","UMLS:C1836255","MEDGEN:322874","GARD:18392","MESH:C563724"],"synonyms":[{"name":"PEE4","type":"related"},{"name":"PREECLAMPSIA/eclampsia 4","type":"related"},{"name":"Preeclampsia/eclampsia type 4","type":"exact"},{"name":"STOX1 preeclampsia","type":"exact"},{"name":"preeclampsia caused by mutation in STOX1","type":"exact"},{"name":"preeclampsia/eclampsia 4","type":"exact"}],"termid":"MONDO:0012266","xrefs":{"Monarch":{"xref_id":"0012266"}}}


id: MONDO:1040041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any exudative vitreoretinopathy caused by a variant in the FZD4 gene.","definition_xrefs":["PMID:21868098","PMID:15035989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exudative vitreoretinopathy","termid":"MONDO:0019516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"FZD4-related exudative vitreoretinopathy","synonyms":[{"name":"FZD4-related exudative vitreoretinopathy","type":"exact"}],"termid":"MONDO:1040041","xrefs":{"Monarch":{"xref_id":"1040041"}}}


id: GO:0002903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of B cell apoptotic process","termid":"GO:0002902"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte apoptotic process","termid":"GO:0070229"},{"relation_name":"negatively_regulates","term_name":"B cell apoptotic process","termid":"GO:0001783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell apoptotic process","synonyms":[{"name":"down regulation of B cell apoptosis","type":"exact"},{"name":"down-regulation of B cell apoptosis","type":"exact"},{"name":"downregulation of B cell apoptosis","type":"exact"},{"name":"inhibition of B cell apoptosis","type":"narrow"},{"name":"negative regulation of B cell apoptosis","type":"narrow"}],"termid":"GO:0002903"}


id: PBO:0050396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C like 1","termid":"PBO:0050396"}


id: PBO:0054820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2233","termid":"PBO:0054820"}


id: MONDO:0001197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blood platelet disease","termid":"MONDO:0002245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"qualitative platelet defect","secondary_identifiers":["MEDGEN:536418","UMLS:C0235604","DOID:11125","ICD9:287.1","SCTID:267532001"],"synonyms":[{"name":"qualitative platelet defect","type":"exact"},{"name":"qualitative platelet deficiency","type":"exact"}],"termid":"MONDO:0001197","xrefs":{"Monarch":{"xref_id":"0001197"}}}


id: FYPO:0007801
data:
  {"alleles_by_uniquename":{"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119852],"is_not":false,"summary":null,"term":"FYPO:0007801"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a dividing cell at the growith end of a hypha has a septum in an abnormal location. Normally, the septum forms in the cytosol-enriched portion of the cell, displaced slightly off-center toward the portion of the cell occupied by the vacuole.","definition_xrefs":["PMID:30726171","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum","termid":"FYPO:0004293"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":1,"genotypes_by_uniquename":{"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mislocalized hyphal septum","references_by_uniquename":{"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_02392"],"single_locus_genotype_uniquenames":["pom1delta"],"synonyms":[{"name":"abnormal hyphal septum localization","type":"related"},{"name":"abnormal hyphal septum location","type":"exact"},{"name":"abnormal hyphal septum position","type":"exact"},{"name":"abnormal hyphal septum positioning","type":"related"},{"name":"mislocalised hyphal septum","type":"exact"},{"name":"mislocalized septum during hyphal growth","type":"exact"},{"name":"mislocalized septum in hypha","type":"exact"},{"name":"mislocalized septum in hyphal growth","type":"exact"},{"name":"misplaced hyphal septum","type":"exact"}],"termid":"FYPO:0007801","terms_by_termid":{"FYPO:0007801":null}}


id: MONDO:0022633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptodactyly joint contractures and facial skeletal dysplasia","secondary_identifiers":["MESH:C537969","MEDGEN:419868","UMLS:C2931678"],"termid":"MONDO:0022633","xrefs":{"Monarch":{"xref_id":"0022633"}}}


id: PBO:0041773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 12","termid":"PBO:0041773"}


id: PBO:0004423
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates ace2 target genes","termid":"PBO:0004423"}


id: PBO:0057917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3620","termid":"PBO:0057917"}


id: GO:0047646
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: R-CHO + reduced FMN + O2 = R-COOH + FMN + H2O + light.","definition_xrefs":["EC:1.14.14.3","MetaCyc:ALKANAL-MONOOXYGENASE-FMN-LINKED-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"alkanal monooxygenase (FMN-linked) activity","secondary_identifiers":["RHEA:17181"],"synonyms":[{"name":"aldehyde monooxygenase activity","type":"broad"},{"name":"alkanal,reduced-FMN:oxygen oxidoreductase (1-hydroxylating, luminescing)","type":"related"},{"name":"bacterial luciferase activity","type":"related"},{"name":"vibrio fischeri luciferase activity","type":"related"}],"termid":"GO:0047646"}


id: MONDO:0031952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic syndromic esophageal malformation (obsolete MONDO:0031952)","secondary_identifiers":["Orphanet:371445"],"termid":"MONDO:0031952","xrefs":{"Monarch":{"xref_id":"0031952"}}}


id: GO:0010500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the transmitting tract over time, from its formation to the mature structure. The transmitting tissue is the tissue in the style of a carpel through which the pollen tube grows; it connects the stigma and the inside of ovary.","definition_xrefs":["PMID:17855426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gynoecium development","termid":"GO:0048467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transmitting tissue development","termid":"GO:0010500"}


id: MONDO:0004342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete osteoclast-like giant cell neoplasm of the pancreas (obsolete MONDO:0004342)","termid":"MONDO:0004342","xrefs":{"Monarch":{"xref_id":"0004342"}}}


id: MONDO:1012808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited eye defect that occurs in dogs due to a mutation in the SIX6 gene.","definition_xrefs":["PMID:31207931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital eye malformation, SIX6-related, dog","secondary_identifiers":["OMIA:002208-9615"],"synonyms":[{"name":"congenital eye malformation, dog","type":"related"},{"name":"eye malformation, SIX6-related, dog","type":"exact"}],"termid":"MONDO:1012808","xrefs":{"Monarch":{"xref_id":"1012808"}}}


id: GO:0016705
data:
  {"annotated_genes":["SJAG_05311","SJAG_03750","SJAG_04000","SJAG_03018","SJAG_03249","SJAG_03997","SJAG_00892","SJAG_00717","SJAG_00221","SJAG_02285","SJAG_01057","SJAG_03664","SJAG_00370","SJAG_03943","SJAG_02401","SJAG_04580","SJAG_03509","SJAG_03286","SJAG_03635","SJAG_04608","SJAG_04913","SJAG_03041","SJAG_05265","SJAG_00642","SJAG_00459"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75019,77960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016706"},{"annotations":[74454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008682"},{"annotations":[109652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160224"},{"annotations":[60875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106364"},{"annotations":[91820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000249"},{"annotations":[70255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000254"},{"annotations":[75693,79419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000248"},{"annotations":[89986,107895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050046"},{"annotations":[72085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019135"},{"annotations":[72827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080132"},{"annotations":[70805,87714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[67234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[70583,75277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[103573,94415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"},{"annotations":[57627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004499"},{"annotations":[60879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016712"},{"annotations":[95145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106156"},{"annotations":[74431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031543"},{"annotations":[112925,92139],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102772"},{"annotations":[74640,72839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042284"},{"annotations":[77555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004506"},{"annotations":[75516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004768"},{"annotations":[88799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008398"},{"annotations":[103441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.","definition_xrefs":["EC:1.14.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00370":null,"SJAG_00459":null,"SJAG_00642":null,"SJAG_00717":null,"SJAG_00892":null,"SJAG_01057":null,"SJAG_02285":null,"SJAG_02401":null,"SJAG_03018":null,"SJAG_03041":null,"SJAG_03249":null,"SJAG_03286":null,"SJAG_03509":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03750":null,"SJAG_03943":null,"SJAG_03997":null,"SJAG_04000":null,"SJAG_04580":null,"SJAG_04608":null,"SJAG_04913":null,"SJAG_05265":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, miscellaneous","type":"narrow"}],"termid":"GO:0016705","terms_by_termid":{"GO:0000248":null,"GO:0000249":null,"GO:0000254":null,"GO:0004499":null,"GO:0004506":null,"GO:0004768":null,"GO:0008398":null,"GO:0008682":null,"GO:0016706":null,"GO:0016712":null,"GO:0019135":null,"GO:0031543":null,"GO:0034647":null,"GO:0042284":null,"GO:0050046":null,"GO:0051864":null,"GO:0080132":null,"GO:0102772":null,"GO:0106156":null,"GO:0106364":null,"GO:0140680":null,"GO:0140683":null,"GO:0160224":null,"GO:1990984":null}}


id: MONDO:0700117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complex movement disorder characterized by tremor, rigidity, bradykinesia, chorea, reduced facial expression, and Parkinsonism-dystonia. This disease is caused by loss of function variants in the SLC6A3 gene, which impair the dopamine transporter protein. The onset of this disease ranges from infancy to adulthood.","definition_xrefs":["PMID:21112253","PMID:28749637","PMID:24613933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC6A3-related dopamine transporter deficiency syndrome","secondary_identifiers":["DOID:0070487"],"synonyms":[{"name":"DTDS","type":"exact"},{"name":"Dopamine transporter deficiency syndrome","type":"exact"}],"termid":"MONDO:0700117","xrefs":{"Monarch":{"xref_id":"0700117"}}}


id: PBO:0060195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 16, cell surface associated","termid":"PBO:0060195"}


id: PBO:0088483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore-iron biosynthesis protein Sib3","termid":"PBO:0088483"}


id: PBO:0054065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1412","termid":"PBO:0054065"}


id: GO:1900827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane depolarization during a cardiac muscle cell action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization during cardiac muscle cell action potential","termid":"GO:1900825"},{"relation_name":"is_a","term_name":"positive regulation of membrane depolarization","termid":"GO:1904181"},{"relation_name":"positively_regulates","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane depolarization during cardiac muscle cell action potential","synonyms":[{"name":"activation of membrane depolarization during cardiac muscle cell action potential","type":"narrow"},{"name":"up regulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1900827"}


id: MOD:00320
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-glutamic acid residue by a thioether bond to form 4-(S-L-cysteinyl)-L-glutamic acid.","definition_xrefs":["PubMed:11555656","RESID:AA0315","ChEBI:20293","PubMed:11717396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioether crosslinked residues","termid":"MOD:00687"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"4-(S-L-cysteinyl)-L-glutamic acid","synonyms":[{"name":"(2S,3S,7R)-2,7-diamino-4-carboxy-5-thiaoctanedioic acid","type":"exact"},{"name":"(2S,4S)-2-amino-4-[(R)-2-amino-2-carboxyethyl]sulfanylpentanedioic acid","type":"exact"},{"name":"4-(L-cystein-S-yl)-L-glutamic acid","type":"exact"},{"name":"CROSSLNK 4-cysteinyl-glutamic acid (Cys-Glu)","type":"exact"}],"termid":"MOD:00320"}


id: MOD:00615
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because entry Unimod:261 site N-term R was abandoned. Remap to MOD:00584","definition_xrefs":["PubMed:14689565","Unimod:261"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00615 4-sulfophenyl isothiocyante modification to N-term R (obsolete MOD:00615)","termid":"MOD:00615"}


id: MONDO:0100452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy caused by a heterozygous gain of function variant in the RPE65 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0000426"],"is_obsolete":false,"name":"RPE65-related dominant retinopathy","secondary_identifiers":["DOID:0112144"],"synonyms":[{"name":"RP87","type":"exact"},{"name":"dominant RPE65 retinopathy","type":"exact"},{"name":"retinitis pigmentosa 87 with choroidal involvement","type":"narrow"}],"termid":"MONDO:0100452","xrefs":{"Monarch":{"xref_id":"0100452"}}}


id: PBO:0017571
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.96","termid":"PBO:0017571"}


id: PBO:0091411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA","termid":"PBO:0091411"}


id: PR:Q9HFE5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apm1 gene.","definition_xrefs":["UniProtKB:Q9HFE5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 complex subunit mu-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.07","synonyms":[{"name":"Spom972h-apm1","type":"exact"},{"name":"clathrin assembly protein complex 1 mu-1 medium chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mu-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HFE5"}


id: PBO:0091453
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Queuosine Nucleoside Glycosylase","termid":"PBO:0091453"}


id: PBO:0059856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methenyltetrahydrofolate synthetase","termid":"PBO:0059856"}


id: PBO:0082214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 3 subunit of the 20S proteasome; the only nonessential 20S subunit; may be replaced by the alpha 4 subunit (Pre6p) under stress conditions to create a more active proteasomal isoform","termid":"PBO:0082214"}


id: GO:0010809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of synaptic vesicle priming. Synaptic vesicle priming is the formation of SNARE-containing complexes, bringing synaptic vesicle membrane and plasma membranes into close proximity and thereby facilitating membrane fusion.","definition_xrefs":["PMID:15489511","GOC:tb","GOC:dph","GOC:kmvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic vesicle priming","termid":"GO:0010807"},{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"negative regulation of synaptic vesicle exocytosis","termid":"GO:2000301"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle priming","termid":"GO:0016082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0006810","GO:0016192","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle priming","termid":"GO:0010809"}


id: GO:0050301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + streptomycin 6-phosphate = phosphate + streptomycin.","definition_xrefs":["EC:3.1.3.39","RHEA:10688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"streptomycin-6-phosphatase activity","secondary_identifiers":["KEGG_REACTION:R02228","MetaCyc:STREPTOMYCIN-6-PHOSPHATASE-RXN"],"synonyms":[{"name":"streptomycin 6-phosphate phosphatase activity","type":"related"},{"name":"streptomycin 6-phosphate phosphohydrolase activity","type":"related"},{"name":"streptomycin-6-P phosphohydrolase activity","type":"related"},{"name":"streptomycin-6-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0050301"}


id: FYPO:0006383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype that results in the formation of an ascus that contains spores of non-uniform size and DNA content, as well as DNA that is not contained within any of the spores. There may also be fewer than four spores.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:17632059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus containing non-uniform spores","termid":"FYPO:0000913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus containing non-uniform spores and unencapsulated DNA","synonyms":[{"name":"abnormal ascospore formation resulting in formation ascus containing non-uniform spores and unencapsulated DNA","type":"exact"},{"name":"abnormal sporulation resulting in formation of asci containing non-uniform spores and unencapsulated DNA","type":"related"},{"name":"abnormal sporulation resulting in formation of ascus containing non-uniform spores and DNA excluded from spores","type":"exact"}],"termid":"FYPO:0006383"}


id: GO:0072736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tert-butyl hydroperoxide (t-BOOH) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkyl hydroperoxide","termid":"GO:0071448"},{"relation_name":"is_a","term_name":"response to tert-butyl hydroperoxide","termid":"GO:0072735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tert-butyl hydroperoxide","synonyms":[{"name":"cellular response to 2-methyl-prop-2-yl-hydroperoxide","type":"exact"},{"name":"cellular response to t-BOOH","type":"exact"}],"termid":"GO:0072736"}


id: GO:0010794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dolichol biosynthesis. Dolichol biosynthesis consists of the chemical reactions and pathways resulting in the formation of dolichols, any 2,3-dihydropolyprenol derived from four or more linked isoprene units.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"dolichol biosynthetic process","termid":"GO:0019408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of dolichol biosynthetic process","termid":"GO:0010794"}


id: GO:1905793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a pericentriolar material.","definition_xrefs":["PMID:21694707","PMID:24385583","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to centrosome","termid":"GO:0071539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to pericentriolar material","synonyms":[{"name":"protein localisation in pericentriolar material","type":"exact"},{"name":"protein localisation to pericentriolar material","type":"exact"},{"name":"protein localization in pericentriolar material","type":"exact"}],"termid":"GO:1905793"}


id: PBO:0088396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acireductone dioxygenase family Adi1","termid":"PBO:0088396"}


id: PR:Q9P7N4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tad3 gene.","definition_xrefs":["UniProtKB:Q9P7N4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific adenosine deaminase subunit tad3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.04c","synonyms":[{"name":"Spom972h-tad3","type":"exact"},{"name":"tRNA-specific adenosine-34 deaminase subunit tad3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7N4"}


id: MONDO:0019822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arterial duct anomaly (obsolete MONDO:0019822)","secondary_identifiers":["Orphanet:95485"],"synonyms":[{"name":"patent ductus arteriosus anomalies","type":"exact"}],"termid":"MONDO:0019822","xrefs":{"Monarch":{"xref_id":"0019822"}}}


id: PBO:0041323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2orf74 antisense RNA 1","termid":"PBO:0041323"}


id: PBO:0070606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 74","termid":"PBO:0070606"}


id: GO:0006641
data:
  {"annotated_genes":["SJAG_03609","SJAG_03162","SJAG_02487","SJAG_02089","SJAG_02543","SJAG_03604","SJAG_02907","SJAG_04041","SJAG_02763","SJAG_01036","SJAG_02683"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71657,77319,90358,74909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019432"},{"annotations":[98797,71898,92223,117976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"},{"annotations":[90438,92224,94001,115177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006642"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving triglyceride, any triester of glycerol. The three fatty acid residues may all be the same or differ in any permutation. Triglycerides are important components of plant oils, animal fats and animal plasma lipoproteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol metabolic process","termid":"GO:0006639"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02683":null,"SJAG_02763":null,"SJAG_02907":null,"SJAG_03162":null,"SJAG_03604":null,"SJAG_03609":null,"SJAG_04041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"triglyceride metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8979227"],"synonyms":[{"name":"triacylglycerol metabolic process","type":"exact"},{"name":"triacylglycerol metabolism","type":"exact"},{"name":"triglyceride metabolism","type":"exact"}],"termid":"GO:0006641","terms_by_termid":{"GO:0006642":null,"GO:0019432":null,"GO:0019433":null}}


id: GO:0010986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of lipoprotein particle clearance. Lipoprotein particle clearance is the process in which a lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipoprotein particle clearance","termid":"GO:0010984"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipoprotein particle clearance","termid":"GO:0010986"}


id: PBO:0045369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis 3 pseudogene 2","termid":"PBO:0045369"}


id: FYPO:0007723
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003751"},{"annotations":[119984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a physical object quality, such as morphology, number, location, etc., of a cell or a cellular component is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03250":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular physical quality phenotype","references_by_uniquename":{"PMID:26774782":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_02763","SJAG_03250"],"single_locus_genotype_uniquenames":["sst4delta","ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"normal cellular physical object quality","type":"exact"}],"termid":"FYPO:0007723","terms_by_termid":{"FYPO:0003751":null,"FYPO:0003780":null}}


id: PBO:0078897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (CTG) 8-1","termid":"PBO:0078897"}


id: PBO:0075024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-35","termid":"PBO:0075024"}


id: MONDO:0008392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Roussy-Levy syndrome","secondary_identifiers":["icd11.foundation:1790389383","ICD9:334.3","SCTID:45853006","MEDGEN:64430","OMIM:180800","Orphanet:3115","UMLS:C0205713","GARD:4741"],"synonyms":[{"name":"Charcot-Marie-Tooth disease (variant)","type":"related"},{"name":"Charcot-Marie-Tooth-Roussy-levy disease","type":"related"},{"name":"HMSN I","type":"related"},{"name":"Roussy Lévy Syndrome","type":"exact"},{"name":"Roussy levy hereditary areflexic dystasia","type":"related"},{"name":"Roussy levy syndrome","type":"exact"},{"name":"Roussy-Lévy syndrome","type":"exact"},{"name":"Roussy-levy disease","type":"exact"},{"name":"Roussy-levy hereditary areflexic dystasia","type":"related"},{"name":"Roussy-levy syndrome","type":"exact"},{"name":"hereditary areflexic dystasia","type":"related"},{"name":"hereditary areflexic dystasia, Roussy-Lévy type","type":"exact"},{"name":"hereditary areflexic dystasia, Roussy-levy type","type":"exact"},{"name":"hereditary motor sensory neuropathy I","type":"related"}],"termid":"MONDO:0008392","xrefs":{"Monarch":{"xref_id":"0008392"}}}


id: PBO:0091943
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin Involved in G1","termid":"PBO:0091943"}


id: PR:O14400
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glycerol-3-phosphate dehydrogenase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11985:SF0","PRO:DNx","OMA:SCHPO04848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate dehydrogenase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.03c","secondary_identifiers":["UniProtKB:O14400"],"synonyms":[{"name":"GPD-M (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPDH-M (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GPD2","type":"exact"}],"termid":"PR:O14400"}


id: GO:0002805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antimicrobial peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide production","termid":"GO:0002784"},{"relation_name":"regulates","term_name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002805"}


id: GO:0045110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the bundles of intermediate filaments. Intermediate filament-associated proteins (IFAPs) cross-link intermediate filaments with one another, forming a bundle or a network, and with other cell structures, including the plasma membrane. The organization of intermediate filaments and their supportive function in various cells types depends in large part on their linkage to other cell structures via IFAPs.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"intermediate filament organization","termid":"GO:0045109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0044085"],"is_obsolete":false,"name":"intermediate filament bundle assembly","synonyms":[{"name":"tonofilament assembly","type":"narrow"}],"termid":"GO:0045110"}


id: GO:0098811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II activating transcription factor and also with the RNA polymerase II basal transcription machinery in order to stop, prevent, or reduce the frequency, rate or extent of transcription.","definition_xrefs":["GOC:BHF","GOC:dos","GOC:rl","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcriptional repressor activity, RNA polymerase II activating transcription factor binding (obsolete GO:0098811)","synonyms":[{"name":"RNA polymerase II activating transcription factor binding transcription factor activity involved in negative regulation of transcription","type":"exact"},{"name":"RNA polymerase II activating transcription factor binding transcription repressor activity","type":"exact"},{"name":"RNA polymerase II transcription repressor activity","type":"broad"}],"termid":"GO:0098811"}


id: PATO:0001585
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's disposition to transmit of an entity through a medium.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conductivity","termid":"PATO:0001585"}


id: GO:0018101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydrolysis of peptidyl-arginine to form peptidyl-citrulline.","definition_xrefs":["PMID:23175390","RESID:AA0214"],"gene_count":0,"genotype_count":0,"name":"obsolete protein citrullination (obsolete GO:0018101)","synonyms":[{"name":"deimination","type":"exact"},{"name":"peptidyl-citrulline anabolism from peptidyl-arginine","type":"exact"},{"name":"peptidyl-citrulline biosynthetic process from peptidyl-arginine","type":"exact"},{"name":"peptidyl-citrulline formation from peptidyl-arginine","type":"exact"},{"name":"peptidyl-citrulline synthesis from peptidyl-arginine","type":"exact"}],"termid":"GO:0018101"}


id: GO:0048741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the skeletal muscle fiber over time, from its formation to the mature structure. Muscle fibers are formed by the maturation of myotubes. They can be classed as slow, intermediate/fast or fast.","definition_xrefs":["GOC:jid","GOC:lm","GOC:mtg_muscle","GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube cell development","termid":"GO:0014904"},{"relation_name":"part_of","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle fiber development","synonyms":[{"name":"skeletal muscle fibre development","type":"exact"},{"name":"skeletal myofiber development","type":"exact"},{"name":"skeletal myofibre development","type":"exact"}],"termid":"GO:0048741"}


id: PR:Q9P6L5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- end4 gene.","definition_xrefs":["UniProtKB:Q9P6L5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytosis protein end4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC688.11","synonyms":[{"name":"SLA2 protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-end4","type":"exact"}],"termid":"PR:Q9P6L5"}


id: PBO:0003713
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INheritance of Peroxisomes","termid":"PBO:0003713"}


id: PBO:0054016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1346","termid":"PBO:0054016"}


id: GO:0060353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell adhesion molecule production","termid":"GO:0060352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell adhesion molecule production","termid":"GO:0060353"}


id: GO:0003087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the release of epinephrine from nerve endings modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by epinephrine","termid":"GO:0003059"},{"relation_name":"part_of","term_name":"positive regulation of the force of heart contraction by neuronal epinephrine-norepinephrine","termid":"GO:0003090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by neuronal epinephrine","synonyms":[{"name":"increased force of heart contraction by epinephrine released from the nerve endings","type":"exact"},{"name":"increased force of heart contraction by neuronal adrenaline","type":"related"},{"name":"increased force of heart contraction by neuronal epinephrine","type":"exact"},{"name":"positive regulation of heart contraction by adrenaline","type":"related"},{"name":"positive regulation of heart contraction by neuronal epinephrine","type":"related"}],"termid":"GO:0003087"}


id: PBO:0089741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage ubiquitin-protein ligase E3 Mpe1","termid":"PBO:0089741"}


id: PBO:0056223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member D4","termid":"PBO:0056223"}


id: PBO:0053786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1037","termid":"PBO:0053786"}


id: GO:0051977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of phospholipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A lysophospholipid is a phospholipid that lacks one of its fatty acyl chains; it is an intermediate formed during digestion of dietary and biliary phospholipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"lysophospholipid transport","termid":"GO:0051977"}


id: SO:0002216
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence [5'-TCG(G/C)(A/T)xxTTxAA], bound by the transcription factor Pho7.","definition_xrefs":["PMID:28811350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pho7_binding_site","synonyms":[{"name":"Pho7 binding site","type":"exact"}],"termid":"SO:0002216"}


id: PBO:0034518
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nuclear_envelope_during_vegetative_growth","termid":"PBO:0034518"}


id: PBO:0003263
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"itty bitty phosphatase","termid":"PBO:0003263"}


id: PR:O74820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg28 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ergosterol biosynthetic protein 28 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.09","synonyms":[{"name":"Spom972h-erg28","type":"exact"}],"termid":"PR:O74820"}


id: GO:0006734
data:
  {"annotated_genes":["SJAG_02009","SJAG_04192","SJAG_01753","SJAG_02369","SJAG_00714","SJAG_02154","SJAG_03903","SJAG_03091","SJAG_03373","SJAG_04334","SJAG_02191","SJAG_02107","SJAG_04495","SJAG_03828","SJAG_03660","SJAG_00839","SJAG_02135","SJAG_00522","SJAG_00027","SJAG_02796","SJAG_01310","SJAG_00605","SJAG_00461","SJAG_03306","SJAG_02945","SJAG_06621","SJAG_06622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72589],"is_not":false,"summary":null,"term":"GO:0006734"},{"annotations":[98595,109763,109764,109760,103983,95352,105810,94858,78197,106181,109765,105812,105811,106182,109762,109759,98324,116738,103726,109761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[116946,96895,88163,112190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043490"},{"annotations":[95446,95447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006735"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving reduced nicotinamide adenine dinucleotide (NADH), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid.","definition_xrefs":["GOC:jl","ISBN:0618254153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide metabolic process","termid":"GO:0046496"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00522":null,"SJAG_00605":null,"SJAG_00714":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_01753":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03306":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"NADH metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NAD (reduced) metabolic process","type":"exact"},{"name":"NAD (reduced) metabolism","type":"exact"},{"name":"NADH metabolism","type":"exact"},{"name":"reduced NAD metabolic process","type":"exact"},{"name":"reduced NAD metabolism","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:0006734","terms_by_termid":{"GO:0006734":null,"GO:0006735":null,"GO:0043490":null,"GO:0061621":null}}


id: GO:2000226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pancreatic A cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"regulates","term_name":"pancreatic A cell differentiation","termid":"GO:0003310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pancreatic A cell differentiation","synonyms":[{"name":"regulation of pancreatic alpha cell differentiation","type":"exact"}],"termid":"GO:2000226"}


id: GO:0019571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-arabinose, the D-enantiomer of arabino-pentose.","definition_xrefs":["GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose catabolic process","termid":"GO:0019568"},{"relation_name":"is_a","term_name":"D-arabinose metabolic process","termid":"GO:0046372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"D-arabinose catabolic process","synonyms":[{"name":"D-arabinose breakdown","type":"exact"},{"name":"D-arabinose catabolism","type":"exact"},{"name":"D-arabinose degradation","type":"exact"}],"termid":"GO:0019571"}


id: MONDO:0006252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infiltrating bladder lymphoepithelioma-like carcinoma (obsolete MONDO:0006252)","termid":"MONDO:0006252","xrefs":{"Monarch":{"xref_id":"0006252"}}}


id: MONDO:0035534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive microcephalic primordial dwarfism characterized by congenital microcephaly and craniofacial features associated with a spectrum of limb abnormalities ranging from mild to severe. Short stature is frequently observed and often is severe.","definition_xrefs":["Orphanet:572761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DONSON-related microcephaly-short stature-limb abnormalities spectrum","secondary_identifiers":["MEDGEN:1814482","UMLS:C5681722","GARD:22314"],"termid":"MONDO:0035534","xrefs":{"Monarch":{"xref_id":"0035534"}}}


id: PBO:0066711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 8","termid":"PBO:0066711"}


id: FYPO:0001930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to gamma radiation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cellular response to gamma radiation","synonyms":[{"name":"abnormal cellular response to gamma radiation during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to gamma radiation during vegetative growth","type":"exact"},{"name":"abnormal sensitivity to gamma radiation","type":"exact"}],"termid":"FYPO:0001930"}


id: _global:causal_relation_between_material_entity_and_a_process
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"_global:causally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_material_entity_and_a_process","secondary_identifiers":["RO:0002595"],"termid":"_global:causal_relation_between_material_entity_and_a_process"}


id: PBO:0069071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 318, pseudogene","termid":"PBO:0069071"}


id: PBO:0076841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric repeat binding factor 2","termid":"PBO:0076841"}


id: MONDO:0009579
data:
  {"annotated_genes":["SJAG_01794"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85789],"is_not":false,"summary":null,"term":"MONDO:0009579"}]},"cv_name":"mondo","definition":"A syndrome defined by megalocornea, multiple skeletal anomalies, characteristic facial dysmorphism (wide fontanels, prominent forehead, hypertelorism, prominent eyes, full cheeks and micrognathia) and developmental delay.","definition_xrefs":["Orphanet:137834"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"excluded_subClassOf","term_name":"arthropathy","termid":"MONDO:0006816"},{"relation_name":"excluded_subClassOf","term_name":"otopalatodigital syndrome spectrum disorder","termid":"MONDO:0018233"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"filamin-related bone disorder","termid":"MONDO:0019690"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01794":null},"genotype_count":0,"is_obsolete":false,"name":"Frank-Ter Haar syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1855305","DOID:0111789","GARD:5138","icd11.foundation:1643548765","MEDGEN:383652","OMIM:211170","OMIM:249420","SCTID:720958002","MESH:C537274","MESH:C536577"],"synonyms":[{"name":"Borrone Dermatocardioskeletal syndrome","type":"exact"},{"name":"Borrone dermatocardioskeletal syndrome","type":"related"},{"name":"Borrone di Rocco Crovato syndrome","type":"exact"},{"name":"FRANK-TER Haar syndrome","type":"related"},{"name":"FTHS","type":"related"},{"name":"Frank Ter Haar syndrome","type":"related"},{"name":"Frank-Ter Haar syndrome","type":"exact"},{"name":"Melnick-Needles syndrome, autosomal recessive","type":"related"},{"name":"Melnick-Needles syndrome, autosomal recessive, formerly","type":"related"},{"name":"Ter Haar syndrome","type":"exact"},{"name":"autosomal recessive Melnick-Needles syndrome (formerly)","type":"related"},{"name":"megalocornea, multiple skeletal anomalies, and developmental delay","type":"related"}],"termid":"MONDO:0009579","terms_by_termid":{"MONDO:0009579":null},"xrefs":{"Monarch":{"xref_id":"0009579"}}}


id: GO:0072114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pronephros are generated and organized. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney morphogenesis","termid":"GO:0060993"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephros morphogenesis","synonyms":[{"name":"pronephric kidney morphogenesis","type":"exact"}],"termid":"GO:0072114"}


id: PBO:0029394
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleoplasm_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029394"}


id: PBO:0110477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIGLA pseudogene 1","termid":"PBO:0110477"}


id: GO:0003824
data:
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id: FYPO:0005872
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the septum is in two asymmetrically located parts and does not completely bisect the cell. Arises when septum assembly begins at two sites which are not on opposite sides of the medial cortex and terminates prematurely on both sides.","definition_xrefs":["PMID:27898700","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized septum during vegetative growth","termid":"FYPO:0000339"},{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000138","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"incomplete septum formed from asymmetrically located sites","synonyms":[{"name":"abnormal septum site selection from asymmetrically located sites, forming incomplete septum","type":"related"},{"name":"incomplete division septum formed from asymmetrically located sites","type":"exact"},{"name":"incomplete septum formed from asymmetrically located sites during mitotic cell cycle","type":"related"},{"name":"incomplete septum formed from asymmetrically located sites during vegetative growth","type":"exact"}],"termid":"FYPO:0005872"}


id: PR:P36585
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2802 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC5E4.07","synonyms":[{"name":"L27A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"L29 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl2802","type":"exact"}],"termid":"PR:P36585"}


id: MONDO:0012891
data:
  {"annotated_genes":["SJAG_01260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87407],"is_not":false,"summary":null,"term":"MONDO:0012891"}]},"cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the TSEN34 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia type 2","termid":"MONDO:0016759"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0005559"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 2C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060269","GARD:15554","MEDGEN:382856","MESH:C567324","OMIM:612390","UMLS:C2676465"],"synonyms":[{"name":"PCH2C","type":"related"},{"name":"TSEN34 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in TSEN34","type":"exact"},{"name":"pontocerebellar hypoplasia, type 2C","type":"related"}],"termid":"MONDO:0012891","terms_by_termid":{"MONDO:0012891":null},"xrefs":{"Monarch":{"xref_id":"0012891"}}}


id: GO:1904559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dextromethorphan stimulus.","definition_xrefs":["GO_REF:0000071","GOC:mr","GOC:TermGenie","PMID:25796330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to isoquinoline alkaloid","termid":"GO:0071317"},{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"response to dextromethorphan","termid":"GO:1904558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dextromethorphan","termid":"GO:1904559"}


id: PBO:0068534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 136, pseudogene","termid":"PBO:0068534"}


id: PBO:0066540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RGS5 antisense RNA 1","termid":"PBO:0066540"}


id: GO:0097203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The tip or margin of the progressing circular lamella that engulfs a particle during phagocytosis. When the two lips of the cup fuse it is converted into a phagosome.","definition_xrefs":["GOC:pf","PMID:20200225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"phagocytic cup","termid":"GO:0001891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"phagocytic cup lip","termid":"GO:0097203"}


id: PBO:0080064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32 pseudogene 1","termid":"PBO:0080064"}


id: GO:0030106
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A major histocompatibility complex class I receptor. These display processed antigens from the endocytosed bacteria. MHC class I proteins can form complexes with processed antigen peptides only if the antigen is synthesized in the same cell. As a consequence, T lymphocytes can only bind to class-I-positive cells that are synthesizing the antigen (e.g. virus-infected cells).","definition_xrefs":["ISBN:081533642X","ISBN:0879694971"],"gene_count":0,"genotype_count":0,"name":"obsolete MHC class I receptor activity (obsolete GO:0030106)","synonyms":[{"name":"MHC class I receptor activity","type":"exact"},{"name":"class I major histocompatibility complex antigen","type":"related"},{"name":"major histocompatibility complex class I receptor","type":"exact"}],"termid":"GO:0030106"}


id: PBO:0030312
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_haploidization","termid":"PBO:0030312"}


id: MONDO:1011128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Azoospermia that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"azoospermia, non-human animal","termid":"MONDO:1010282"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"azoospermia, horse","secondary_identifiers":["OMIA:002500-9796"],"termid":"MONDO:1011128","xrefs":{"Monarch":{"xref_id":"1011128"}}}


id: FYPO:0002775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of sumoylated protein measured the cell is lower than normal when the cell is in the vegetative growth phase of the life cycle. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of sumoylated protein in cell","synonyms":[{"name":"decreased accumulation of sumoylated protein in cell","type":"related"},{"name":"decreased level of sumoylated protein in cell during mitotic cell cycle","type":"related"},{"name":"decreased level of sumoylated protein in cell during vegetative growth","type":"exact"},{"name":"decreased sumoylated protein level during vegetative growth","type":"exact"},{"name":"reduced level of sumoylated protein in cell","type":"exact"}],"termid":"FYPO:0002775"}


id: SO:0001510
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A change in chromosomes that occurs between two separate chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_variation_attribute","termid":"SO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intrachromosomal","termid":"SO:0001510"}


id: GO:0042283
data:
  {"annotated_genes":["SJAG_01950"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80345],"is_not":false,"summary":null,"term":"GO:0042283"}]},"cv_name":"molecular_function","definition":"Catalysis of the addition of the second glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation; the transfer of glucose from dolichyl phosphate glucose (Dol-P-Glc) on to the lipid-linked oligosaccharide Glc(1)Man(9)GlcNAc(2)-PP-Dol.","definition_xrefs":["MetaCyc:RXN-5471","PMID:12480927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity","termid":"GO:0004583"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.4.1.265","RHEA:31307"],"synonyms":[{"name":"dolichyl-P-Glc:Glc1Man9GlcNAc2-PP-dolichyl glucosyltransferase activity","type":"exact"}],"termid":"GO:0042283","terms_by_termid":{"GO:0042283":null}}


id: GO:0009265
data:
  {"annotated_genes":["SJAG_03771","SJAG_04487","SJAG_02874","SJAG_04657","SJAG_02948","SJAG_04665","SJAG_00885","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72400],"is_not":false,"summary":null,"term":"GO:0009265"},{"annotations":[107618,92767,95822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[71399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[70316,79824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[71400,92768,69032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[71398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[79797,70315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a 2'-deoxyribonucleotide, a compound consisting of 2'-deoxyribonucleoside (a base linked to a 2'-deoxyribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleotide biosynthetic process","termid":"GO:0009263"},{"relation_name":"is_a","term_name":"2'-deoxyribonucleotide metabolic process","termid":"GO:0009394"},{"relation_name":"is_a","term_name":"deoxyribose phosphate biosynthetic process","termid":"GO:0046385"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00885":null,"SJAG_02874":null,"SJAG_02948":null,"SJAG_03771":null,"SJAG_04487":null,"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2'-deoxyribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"2'-deoxyribonucleotide anabolism","type":"exact"},{"name":"2'-deoxyribonucleotide biosynthesis","type":"exact"},{"name":"2'-deoxyribonucleotide formation","type":"exact"},{"name":"2'-deoxyribonucleotide synthesis","type":"exact"}],"termid":"GO:0009265","terms_by_termid":{"GO:0006226":null,"GO:0006227":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0009265":null}}


id: PBO:0064469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta interacting protein 3","termid":"PBO:0064469"}


id: PBO:0004146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ric8 family guanine nulceotide exchange factor synembryn family","termid":"PBO:0004146"}


id: PBO:0047282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group F","termid":"PBO:0047282"}


id: MONDO:0017324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive hypophosphatemic rickets (ARHR) is a hereditary renal phosphate-wasting disorder characterized by hypophosphatemia, rickets and/or osteomalacia and slow growth.","definition_xrefs":["Orphanet:289176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hypophosphatemic rickets","termid":"MONDO:0000044"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive hypophosphatemic rickets","secondary_identifiers":["SCTID:90505000","GARD:17320","DOID:0050949","UMLS:C0342643","ICD10CM:E83.3","MEDGEN:137975"],"synonyms":[{"name":"ARHR","type":"exact"},{"name":"autosomal recessive hereditary hypophosphatemic rickets","type":"exact"},{"name":"hereditary hypophosphatemic rickets, autosomal recessive","type":"exact"},{"name":"hypophosphatemic rickets, autosomal recessive","type":"exact"}],"termid":"MONDO:0017324","xrefs":{"Monarch":{"xref_id":"0017324"}}}


id: PBO:0090936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase Ptp4/Dgk1","termid":"PBO:0090936"}


id: GO:0035309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that subdivides the wing imaginal disc into the wing and notum (body wall) subfields, thus determining whether cells ultimately differentiate wing or notum-specific structures.","definition_xrefs":["PMID:10860999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"wing disc development","termid":"GO:0035220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing and notum subfield formation","termid":"GO:0035309"}


id: PBO:0015215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocytosis protein Mso1 (predicted)","termid":"PBO:0015215"}


id: PBO:0038715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 10","termid":"PBO:0038715"}


id: PR:O74844
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fta7 gene.","definition_xrefs":["UniProtKB:O74844","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein fta7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.07","synonyms":[{"name":"Spom972h-fta7","type":"exact"},{"name":"sim4 complex subunit fta7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"sim4-mal2-associated protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74844"}


id: FYPO:0001259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hypoxia is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during cellular response to hypoxia","synonyms":[{"name":"decreased RNA accumulation during cellular response to hypoxia","type":"related"},{"name":"decreased RNA level during cellular response to hyperoxic stress","type":"exact"},{"name":"decreased RNA level during cellular response to hypoxia during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to increased oxygen tension","type":"exact"},{"name":"decreased transcript level during cellular response to hypoxia","type":"exact"},{"name":"reduced RNA level during cellular response to hypoxia","type":"exact"}],"termid":"FYPO:0001259"}


id: PBO:0068859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 99, pseudogene","termid":"PBO:0068859"}


id: PBO:0053082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysosome cell death regulator","termid":"PBO:0053082"}


id: PBO:0110388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPPE1 pseudogene 2","termid":"PBO:0110388"}


id: GO:0140644
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Extracellular microbicidal structure composed of nuclear chromatin, histones and granular antimicrobial proteins. Histones and several neutrophil granule proteins associated with the DNA framework damage entrapped microorganisms.","definition_xrefs":["PMID:31172493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular membraneless organelle","termid":"GO:0043264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"neutrophil extracellular trap","synonyms":[{"name":"NET","type":"broad"}],"termid":"GO:0140644"}


id: GO:1901978
data:
  {"annotated_genes":["SJAG_04259","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[117065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell cycle checkpoint.","definition_xrefs":["GOC:TermGenie","PMID:23028116","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle checkpoint","termid":"GO:1901976"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell cycle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:2001052"],"synonyms":[{"name":"activation of cell cycle checkpoint","type":"narrow"},{"name":"positive regulation of G1/S checkpoint","type":"related"},{"name":"positive regulation of G1/S transition checkpoint","type":"related"},{"name":"up regulation of cell cycle checkpoint","type":"exact"},{"name":"up-regulation of cell cycle checkpoint","type":"exact"},{"name":"upregulation of cell cycle checkpoint","type":"exact"}],"termid":"GO:1901978","terms_by_termid":{"GO:0090267":null,"GO:1905326":null}}


id: PBO:0043518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centriolin","termid":"PBO:0043518"}


id: PBO:0017480
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_related_to","termid":"PBO:0017480"}


id: PBO:0066140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB1 inducible coiled-coil 1","termid":"PBO:0066140"}


id: PR:O60186
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsm10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.01","synonyms":[{"name":"Spom972h-rsm10","type":"exact"}],"termid":"PR:O60186"}


id: MONDO:0018382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epiphysiolysis of the hip is a rare osteonecrosis disorder characterized by unilateral or bilateral disruption of the capital femoral physis with varying degrees of posterior epiphysis translation and simultaneous anterior metaphysis displacement. Patients typically present in pre-adolescence/adolescence with pain of variable intensity in varying locations (hip, groin, thigh, knee).","definition_xrefs":["Orphanet:399329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteonecrosis of genetic origin","termid":"MONDO:0018383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiphysiolysis of the hip","secondary_identifiers":["MEDGEN:57704","SCTID:26460006","UMLS:C0149887","MESH:D060048","GARD:21666","OMIM:182260"],"synonyms":[{"name":"SCFE","type":"exact"},{"name":"SUFE","type":"exact"},{"name":"SufE","type":"exact"},{"name":"epiphysiolysis capitis femoris","type":"exact"},{"name":"epiphysiolysis of the upper femur","type":"exact"},{"name":"femoral head epiphysiolysis","type":"exact"},{"name":"slipped capital femoral epiphysis","type":"exact"},{"name":"slipped femoral capital epiphyses","type":"exact"},{"name":"slipped upper femoral epiphysis","type":"exact"}],"termid":"MONDO:0018382","xrefs":{"Monarch":{"xref_id":"0018382"}}}


id: PBO:0061117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLRP7 pseudogene 1","termid":"PBO:0061117"}


id: MONDO:0013813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary dystonia, DYT21 type is a subtype of mixed dystonia with a late-onset form of pure torsion dystonia.","definition_xrefs":["Orphanet:306734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generalized dystonia","termid":"MONDO:0000476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia 21","secondary_identifiers":["GARD:17383","DOID:0090046","MEDGEN:482866","UMLS:C3281236","OMIM:614588"],"synonyms":[{"name":"DYT21","type":"exact"},{"name":"dystonia 21","type":"exact"},{"name":"dystonia type 21","type":"exact"},{"name":"primary dystonia, DYT21 type","type":"related"}],"termid":"MONDO:0013813","xrefs":{"Monarch":{"xref_id":"0013813"}}}


id: MONDO:0020145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete developmental defect of the eye (obsolete MONDO:0020145)","secondary_identifiers":["Orphanet:98553"],"termid":"MONDO:0020145","xrefs":{"Monarch":{"xref_id":"0020145"}}}


id: GO:0045257
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The enzyme that catalyzes the oxidation of succinate and ubiquinone to fumarate and ubiquinol; involved in aerobic respiration, repressed in anaerobic respiration.","definition_xrefs":["ISBN:0198547684","GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete succinate dehydrogenase complex (ubiquinone) (obsolete GO:0045257)","termid":"GO:0045257"}


id: MONDO:0004844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A white patch or plaque on the oral mucosa that cannot be characterized clinically or pathologically as any other disease. The diagnosis of leukoplakia is one of exclusion; other conditions such as candidiasis, lichen planus, leukoedema, etc., must be ruled out before a diagnosis of leukoplakia can be made. Leukoplakia may be a premalignant condition.","definition_xrefs":["NCIT:C3187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukoplakia","termid":"MONDO:0043243"},{"relation_name":"is_a","term_name":"mouth mucosa disorder","termid":"MONDO:0044992"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oral mucosa leukoplakia","secondary_identifiers":["MESH:D007972","SCTID:414603003","DOID:9655","ICD9:528.6","MEDGEN:9738","UMLS:C0023532"],"synonyms":[{"name":"leukokeratosis of oral mucosa","type":"exact"},{"name":"leukoplakia of oral mucosa","type":"exact"},{"name":"leukoplakia of the oral mucosa","type":"exact"},{"name":"oral keratoses","type":"exact"},{"name":"oral keratosis","type":"exact"},{"name":"oral leukoplakia","type":"exact"}],"termid":"MONDO:0004844","xrefs":{"Monarch":{"xref_id":"0004844"}}}


id: PBO:0054983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2397","termid":"PBO:0054983"}


id: MOD:00503
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-(cis-delta 5)-tetradecaenoylglycine.","definition_xrefs":["PubMed:1326520","PubMed:11955007","PubMed:7543369","OMSSA:78","PubMed:6436247","RESID:AA0059#var","Unimod:134#G","PubMed:1386601","PubMed:11955008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(cis-delta 5)-tetradecaenoylglycine","synonyms":[{"name":"(cis-delta 5)-tetradecaenoyl","type":"related"},{"name":"Myristoleyl","type":"related"},{"name":"N-(C14:1 aliphatic acyl)glycine","type":"exact"},{"name":"myristoleylation (one double bond)","type":"exact"},{"name":"ntermpepmyristoyeylationg","type":"exact"}],"termid":"MOD:00503"}


id: GO:0035325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-like protein, a pattern recognition receptor that binds pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["PMID:19076341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"Toll-like receptor binding","synonyms":[{"name":"TLR binding","type":"exact"}],"termid":"GO:0035325"}


id: PBO:0000174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/DEAH box helicase","termid":"PBO:0000174"}


id: PBO:0062159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily H member 12 pseudogene","termid":"PBO:0062159"}


id: PBO:0047950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(17)(q23.1)","termid":"PBO:0047950"}


id: PBO:0080365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 20 pseudogene","termid":"PBO:0080365"}


id: GO:0008962
data:
  {"annotated_genes":["SJAG_03700"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59608],"is_not":false,"summary":null,"term":"GO:0008962"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylglycerophosphate + H2O = phosphatidylglycerol + phosphate.","definition_xrefs":["PMID:4292860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"phosphatidylglycerophosphatase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["RHEA:16725","MetaCyc:PGPPHOSPHA-RXN","EC:3.1.3.27","Reactome:R-HSA-1483197"],"synonyms":[{"name":"PGP phosphatase activity","type":"related"},{"name":"phosphatidylglycerol phosphatase activity","type":"related"},{"name":"phosphatidylglycerol phosphate phosphatase activity","type":"related"},{"name":"phosphatidylglycerophosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0008962","terms_by_termid":{"GO:0008962":null}}


id: PBO:0031618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transposition","termid":"PBO:0031618"}


id: PBO:0001367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex subunit Php3","termid":"PBO:0001367"}


id: PBO:0027777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_actomyosin_contractile_ring_contraction","termid":"PBO:0027777"}


id: FYPO:0005343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is decreased during anaphase B.","definition_xrefs":["PomBase:mah","PMID:19686686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of mitotic spindle elongation","termid":"FYPO:0003268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000337","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000054","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of mitotic spindle elongation during anaphase B","synonyms":[{"name":"decreased rate of mitotic spindle elongation during anaphase B during vegetative growth","type":"exact"},{"name":"decreased rate of mitotic spindle elongation during mitotic anaphase B","type":"exact"},{"name":"decreased rate of mitotic spindle extension during anaphase B","type":"exact"},{"name":"decreased rate of spindle elongation during anaphase B of mitosis","type":"exact"},{"name":"reduced rate of mitotic spindle elongation during anaphase B","type":"exact"}],"termid":"FYPO:0005343"}


id: MONDO:0014417
data:
  {"annotated_genes":["SJAG_01356","SJAG_02885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86622,86623],"is_not":false,"summary":null,"term":"MONDO:0014417"}]},"cv_name":"mondo","definition":"Spinocerebellar ataxia type 38 (SCA38) is a subtype of autosomal dominant cerebellar ataxia type 3 characterized by the adult-onset (average age: 40 years) of truncal ataxia, gait disturbance and gaze-evoked nystagmus. The disease is slowly progressive with dysarthria and limb ataxia following. Additional manifestations include diplopia and axonal neuropathy.","definition_xrefs":["Orphanet:423296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01356":null,"SJAG_02885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002039","MONDO:0002525","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia type 38","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:734021001","GARD:12369","MEDGEN:1379865","DOID:0050985","OMIM:615957","UMLS:C4518337"],"synonyms":[{"name":"SCA38","type":"exact"},{"name":"spinocerebellar ataxia 38","type":"related"},{"name":"spinocerebellar ataxia type 38","type":"exact"}],"termid":"MONDO:0014417","terms_by_termid":{"MONDO:0014417":null},"xrefs":{"Monarch":{"xref_id":"0014417"}}}


id: GO:0018657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: toluene + 1/2 O2 = 3-hydroxytoluene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete toluene 3-monooxygenase activity (obsolete GO:0018657)","termid":"GO:0018657"}


id: GO:0071229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of the dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.","definition_xrefs":["GOC:go_curators","Wikipedia:Acid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acid chemical","synonyms":[{"name":"cellular response to acid","type":"broad"},{"name":"cellular response to acid anion","type":"related"},{"name":"cellular response to oxoanion","type":"related"}],"termid":"GO:0071229"}


id: PBO:0039612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A1","termid":"PBO:0039612"}


id: PBO:0052487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 2","termid":"PBO:0052487"}


id: MOD:01701
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes a hydrogen cation, a proton, forming an anionic residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deprotonated residue","synonyms":[{"name":"H-NRes","type":"exact"}],"termid":"MOD:01701"}


id: GO:0016063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of rhodopsin, a brilliant purplish-red, light-sensitive visual pigment found in the rod cells of the retinas.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment biosynthetic process","termid":"GO:0006726"},{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"is_a","term_name":"rhodopsin metabolic process","termid":"GO:0046154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhodopsin biosynthetic process","synonyms":[{"name":"rhodopsin anabolism","type":"exact"},{"name":"rhodopsin biosynthesis","type":"exact"},{"name":"rhodopsin formation","type":"exact"},{"name":"rhodopsin synthesis","type":"exact"}],"termid":"GO:0016063"}


id: GO:0030543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which copies of the 2-micrometer plasmid, found in fungi such as Saccharomyces, are distributed to daughter cells upon cell division.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmid partitioning","termid":"GO:0030541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-micrometer plasmid partitioning","termid":"GO:0030543"}


id: GO:0015043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 Fe(III)-[leghemoglobin] + NAD(P)H = 2 Fe(II)-[leghemoglobin] + NAD(P)+ + H+.","definition_xrefs":["EC:1.6.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor","termid":"GO:0016653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"leghemoglobin reductase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:LEGHEMOGLOBIN-REDUCTASE-RXN"],"synonyms":[{"name":"NAD(P)H:ferrileghemoglobin oxidoreductase activity","type":"related"},{"name":"ferric leghemoglobin reductase activity","type":"related"},{"name":"leghemoglobin reductase activity","type":"exact"}],"termid":"GO:0015043"}


id: MONDO:0000473
data:
  {"annotated_genes":["SJAG_03081","SJAG_02218","SJAG_00210","SJAG_02977"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87632,87633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012011"},{"annotations":[87643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007781"},{"annotations":[87242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013458"}]},"cv_name":"mondo","definition":"An impairment of the structure or function of the blood vessels which carry blood away from the heart.","definition_xrefs":["NCIT:C35317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00210":null,"SJAG_02218":null,"SJAG_02977":null,"SJAG_03081":null},"genotype_count":0,"is_obsolete":false,"name":"arterial disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0852949","ICD9:447.9","MEDGEN:208875","SCTID:359557001","DOID:0050828","ICD9:447.8"],"synonyms":[{"name":"arterial disease","type":"exact"},{"name":"arterial disorder","type":"exact"},{"name":"arteriopathy","type":"exact"},{"name":"artery disease","type":"exact"},{"name":"artery disease or disorder","type":"exact"},{"name":"disease of artery","type":"exact"},{"name":"disease or disorder of artery","type":"exact"},{"name":"disorder of artery","type":"exact"}],"termid":"MONDO:0000473","terms_by_termid":{"MONDO:0007781":null,"MONDO:0012011":null,"MONDO:0013458":null},"xrefs":{"Monarch":{"xref_id":"0000473"}}}


id: GO:0021564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the vagus nerve over time, from its formation to the mature structure. This nerve is primarily sensory but also has visceromotor components. It originates in the brain stem and controls many autonomic functions of the heart, lungs, stomach, pharynx, larynx, trachea, esophagus and other gastrointestinal tract components. It controls some motor functions such as speech. The sensory branches mediate sensation from the pharynx, larynx, thorax and abdomen; it also innervates taste buds in the epiglottis.","definition_xrefs":["GOC:cls","GOC:jid","ISBN:0838580343","GOC:dph","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagus nerve development","synonyms":[{"name":"CN X development","type":"related"},{"name":"cranial nerve 10 development","type":"related"},{"name":"cranial nerve X development","type":"exact"}],"termid":"GO:0021564"}


id: GO:0043865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of methionine from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transmembrane transporter activity","termid":"GO:0000099"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"methionine transmembrane transporter activity","secondary_identifiers":["GO:1990240"],"synonyms":[{"name":"methionine importer","type":"related"},{"name":"methionine importer activity","type":"narrow"},{"name":"methionine importing activity","type":"narrow"},{"name":"methionine-importing activity","type":"narrow"}],"termid":"GO:0043865"}


id: FYPO:0003038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which RNA stability is abnormal. RNA molecules may be more or less likely to degrade over a given time period than in wild type. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal RNA stability","synonyms":[{"name":"altered RNA stability","type":"exact"}],"termid":"FYPO:0003038"}


id: GO:0042794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of ribosomal RNA (rRNA) from a plastid DNA template, usually by a specific plastid RNA polymerase.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA transcription","termid":"GO:0009303"},{"relation_name":"is_a","term_name":"plastid transcription","termid":"GO:0042793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"plastid rRNA transcription","synonyms":[{"name":"rRNA transcription from plastid promoter","type":"exact"}],"termid":"GO:0042794"}


id: PBO:0052665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 33","termid":"PBO:0052665"}


id: MONDO:0000269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inhalation anthrax (obsolete MONDO:0000269)","termid":"MONDO:0000269","xrefs":{"Monarch":{"xref_id":"0000269"}}}


id: PBO:0072723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING1 and YY1 binding protein","termid":"PBO:0072723"}


id: GO:0045437
data:
  {"annotated_genes":["SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90983],"is_not":false,"summary":null,"term":"GO:0045437"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + uridine = ribofuranose + uracil.","definition_xrefs":["EC:3.2.2.3","RHEA:15577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribosylpyrimidine nucleosidase activity","termid":"GO:0050263"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"uridine nucleosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01080","MetaCyc:URIDINE-NUCLEOSIDASE-RXN"],"synonyms":[{"name":"uridine hydrolase activity","type":"exact"},{"name":"uridine ribohydrolase activity","type":"related"}],"termid":"GO:0045437","terms_by_termid":{"GO:0045437":null}}


id: MONDO:0041403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition where a toxic reaction in the optic nerve results in visual loss. Various poisonous substances may cause the condition as well as nutritional factors.","definition_xrefs":["Wikipedia:Toxic_amblyopia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"suppression amblyopia","termid":"MONDO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic amblyopia","secondary_identifiers":["UMLS:C0237979","MEDGEN:536749","SCTID:30483005"],"synonyms":[{"name":"nutritional optic neuropathy","type":"narrow"},{"name":"tobacco amblyopia","type":"narrow"}],"termid":"MONDO:0041403","xrefs":{"Monarch":{"xref_id":"0041403"}}}


id: GO:0008855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage in either 5' to 3' or 3' to 5' direction to yield 5'-phosphomononucleotides.","definition_xrefs":["EC:3.1.11.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0004527","GO:0140097","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"exodeoxyribonuclease VII activity","secondary_identifiers":["MetaCyc:3.1.11.6-RXN"],"synonyms":[{"name":"E. coli exonuclease VII","type":"related"},{"name":"E. coli exonuclease VII activity","type":"narrow"},{"name":"Escherichia coli exonuclease VII","type":"related"},{"name":"endodeoxyribonuclease VII","type":"related"},{"name":"exonuclease VII activity","type":"related"}],"termid":"GO:0008855"}


id: MONDO:1012596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in humpback whales due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, humpback whale","secondary_identifiers":["OMIA:000202-9773"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Megaptera novaeangliae (humpback whale)","type":"exact"}],"termid":"MONDO:1012596","xrefs":{"Monarch":{"xref_id":"1012596"}}}


id: PBO:0042143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 3 pseudogene 1","termid":"PBO:0042143"}


id: PBO:0029606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transporter_activity_phenotype","termid":"PBO:0029606"}


id: GO:0031388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing one or more phosphate groups into an organic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"organic acid phosphorylation","termid":"GO:0031388"}


id: PBO:0086855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA-binding protein; interacts with Mex67p, which is a component of the nuclear pore involved in nuclear mRNA export; MIP6 has a paralog, PES4, that arose from the whole genome duplication","termid":"PBO:0086855"}


id: PR:O13741
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein 34 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR24011:SF57","OMA:SCHPO01463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.06c","secondary_identifiers":["UniProtKB:O13741"],"synonyms":[{"name":"Spom972h-RBM34","type":"exact"}],"termid":"PR:O13741"}


id: GO:0042935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of achromobactin, a citrate siderophore, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","PMID:10928541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"siderophore transport","termid":"GO:0015891"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"achromobactin transport","termid":"GO:0042935"}


id: PATO:0002466
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer resembling a keyhole.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keyhole shaped","termid":"PATO:0002466"}


id: MONDO:0008199
data:
  {"annotated_genes":["SJAG_00421","SJAG_01317","SJAG_01039"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87665,87666],"is_not":false,"summary":null,"term":"MONDO:0008199"},{"annotations":[87629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013625"}]},"cv_name":"mondo","definition":"A Parkinson disease that begins after around the age of 50.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"primary orthostatic hypotension","termid":"MONDO:0015914"},{"relation_name":"is_a","term_name":"Parkinson disease","termid":"MONDO:0005180"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_01039":null,"SJAG_01317":null},"genotype_count":0,"is_obsolete":false,"name":"late-onset Parkinson disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:463618","UMLS:C3160718","GARD:17684","OMIM:168600","DOID:0060892","Orphanet:411602","SCTID:716662004"],"synonyms":[{"name":"LOPD","type":"exact"},{"name":"PARK","type":"exact"},{"name":"PD","type":"exact"},{"name":"Parkinson disease, age of onset, modifier, Multifactorial","type":"exact"},{"name":"Parkinson disease, late-onset","type":"exact"},{"name":"Parkinson disease, late-onset, susceptibility to, Multifactorial","type":"exact"},{"name":"Parkinson disease, susceptibility to, Multifactorial","type":"exact"},{"name":"autosomal dominant late-onset Parkinson disease","type":"exact"},{"name":"hereditary late onset Parkinson disease","type":"exact"},{"name":"hereditary late-onset Parkinson disease","type":"exact"},{"name":"late onset Parkinson disease","type":"exact"},{"name":"late onset Parkinson's disease","type":"exact"},{"name":"late-onset Parkinson disease","type":"exact"}],"termid":"MONDO:0008199","terms_by_termid":{"MONDO:0008199":null,"MONDO:0013625":null},"xrefs":{"Monarch":{"xref_id":"0008199"}}}


id: PBO:0056359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 1 interacting protein 1 like","termid":"PBO:0056359"}


id: MONDO:0011658
data:
  {"annotated_genes":["SJAG_02106","SJAG_04404"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86520,86521],"is_not":false,"summary":null,"term":"MONDO:0011658"}]},"cv_name":"mondo","definition":"Any Parkinson disease in which the cause of the disease is a mutation in the PARK7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"young-onset Parkinson disease","termid":"MONDO:0017279"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02106":null,"SJAG_04404":null},"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive early-onset Parkinson disease 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565238","GARD:18606","OMIM:606324","UMLS:C1853445","DOID:0060370","MEDGEN:344049"],"synonyms":[{"name":"PARK7","type":"related"},{"name":"PARK7 Parkinson disease","type":"exact"},{"name":"Parkinson disease 7, autosomal recessive early-onset","type":"related"},{"name":"Parkinson disease caused by mutation in PARK7","type":"exact"},{"name":"autosomal recessive early-onset Parkinson disease 7","type":"exact"},{"name":"autosomal recessive early-onset Parkinson disease type 7","type":"exact"},{"name":"autosomal recessive early-onset Parkinson's disease 7","type":"related"}],"termid":"MONDO:0011658","terms_by_termid":{"MONDO:0011658":null},"xrefs":{"Monarch":{"xref_id":"0011658"}}}


id: PBO:0074157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member F1","termid":"PBO:0074157"}


id: GO:0071541
data:
  {"annotated_genes":["SJAG_04891","SJAG_02628","SJAG_04744","SJAG_02995","SJAG_02164","SJAG_03472","SJAG_03147","SJAG_04900","SJAG_04981"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59641,74711,75455,76016,95125,97182,98062,99261,105961],"is_not":false,"summary":null,"term":"GO:0071541"}]},"cv_name":"cellular_component","definition":"An eukaryotic translation initiation factor 3 complex that contains the PCI-domain protein eIF3m.","definition_xrefs":["PMID:15904532","PMID:19061185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eukaryotic translation initiation factor 3 complex","termid":"GO:0005852"}],"gene_count":9,"genes_by_uniquename":{"SJAG_02164":null,"SJAG_02628":null,"SJAG_02995":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_04744":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 complex, eIF3m","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"eIF3m-containing eukaryotic translation initiation factor 3 complex","type":"exact"}],"termid":"GO:0071541","terms_by_termid":{"GO:0071541":null}}


id: GO:0071559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a transforming growth factor beta stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth factor","termid":"GO:0070848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to transforming growth factor beta","synonyms":[{"name":"response to TGF-beta stimulus","type":"exact"},{"name":"response to TGFbeta stimulus","type":"exact"},{"name":"response to transforming growth factor beta stimulus","type":"exact"}],"termid":"GO:0071559"}


id: GO:0042956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of maltodextrin, any polysaccharide of glucose residues in beta-(1,4) linkage, across a membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dextrin transport","termid":"GO:0042955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maltodextrin transmembrane transport","synonyms":[{"name":"maltodextrin transport","type":"broad"}],"termid":"GO:0042956"}


id: SO:1000151
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal inversion caused by three breaks in the same chromosome; both central segments are inverted in place (i.e., they are not transposed).","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_inversion","termid":"SO:1000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bipartite_inversion","synonyms":[{"name":"(Drosophila)bIn","type":"related"},{"name":"bipartite inversion","type":"exact"}],"termid":"SO:1000151"}


id: PBO:0024813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causal_agent_in","termid":"PBO:0024813"}


id: PBO:0050787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 3A","termid":"PBO:0050787"}


id: MONDO:0100576
data:
  {"annotated_genes":["SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014517"}]},"cv_name":"mondo","definition":"An instance of generalized epilepsy that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"genetic generalized epilepsy","termid":"MONDO:0100575"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03536":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"hereditary generalized epilepsy","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100576","terms_by_termid":{"MONDO:0014517":null},"xrefs":{"Monarch":{"xref_id":"0100576"}}}


id: GO:0030177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Wnt signal transduction.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"positively_regulates","term_name":"Wnt signaling pathway","termid":"GO:0016055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of Wnt signaling pathway","secondary_identifiers":["GO:0045811"],"synonyms":[{"name":"activation of Wnt receptor signaling pathway","type":"narrow"},{"name":"activation of frizzled signaling pathway","type":"narrow"},{"name":"positive regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway","type":"exact"},{"name":"positive regulation of frizzled signaling pathway","type":"exact"},{"name":"positive regulation of frizzled signalling pathway","type":"exact"},{"name":"stimulation of Wnt receptor signaling pathway","type":"narrow"},{"name":"stimulation of frizzled signaling pathway","type":"narrow"},{"name":"up regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"up regulation of frizzled signaling pathway","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway","type":"exact"},{"name":"up-regulation of frizzled signaling pathway","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway","type":"exact"},{"name":"upregulation of frizzled signaling pathway","type":"exact"}],"termid":"GO:0030177"}


id: PBO:0086263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates telomeric length; protects telomeric ends in a complex with Cdc13p and Stn1p; similar to human Ten1 which is critical for the telomeric function of the CST (Cdc13p-Stn1p-Ten1p) complex","termid":"PBO:0086263"}


id: MONDO:0001056
data:
  {"annotated_genes":["SJAG_03453","SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87378,87379],"is_not":false,"summary":null,"term":"MONDO:0001056"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the stomach.","definition_xrefs":["NCIT:C9331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"gastric neoplasm","termid":"MONDO:0021085"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02261":null,"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"gastric cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:151.4","OMIM:613659","ICD10CM:C16","ICD9:151.5","DOID:10534","MEDGEN:44264","UMLS:C0024623","ICD9:151.9","ICD9:151","ICD9:151.6"],"synonyms":[{"name":"Ca body - stomach","type":"narrow"},{"name":"Ca lesser curvature - stomach","type":"exact"},{"name":"GC","type":"exact"},{"name":"ca greater curvature of stomach","type":"narrow"},{"name":"cancer of stomach","type":"exact"},{"name":"gastric cancer","type":"exact"},{"name":"gastric cancer risk after h. pylori infection","type":"exact"},{"name":"gastric cancer, intestinal","type":"related"},{"name":"gastric cancer, somatic","type":"exact"},{"name":"gastric neoplasm","type":"broad"},{"name":"malignant gastric neoplasm","type":"exact"},{"name":"malignant gastric tumor","type":"exact"},{"name":"malignant gastric tumour","type":"exact"},{"name":"malignant neoplasm of body of stomach","type":"narrow"},{"name":"malignant neoplasm of lesser curve of stomach","type":"exact"},{"name":"malignant neoplasm of stomach","type":"exact"},{"name":"malignant neoplasm of the stomach","type":"exact"},{"name":"malignant stomach neoplasm","type":"exact"},{"name":"malignant tumor of body of stomach","type":"exact"},{"name":"malignant tumor of greater curve of stomach","type":"exact"},{"name":"malignant tumor of lesser curve of stomach","type":"exact"},{"name":"malignant tumor of stomach","type":"exact"},{"name":"malignant tumor of the stomach","type":"exact"},{"name":"malignant tumour of body of stomach","type":"exact"},{"name":"malignant tumour of greater curve of stomach","type":"exact"},{"name":"malignant tumour of lesser curve of stomach","type":"exact"},{"name":"malignant tumour of stomach","type":"exact"},{"name":"malignant tumour of the stomach","type":"exact"},{"name":"stomach cancer","type":"exact"}],"termid":"MONDO:0001056","terms_by_termid":{"MONDO:0001056":null},"xrefs":{"Monarch":{"xref_id":"0001056"}}}


id: PBO:0070331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 3","termid":"PBO:0070331"}


id: PBO:0054912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2326","termid":"PBO:0054912"}


id: PBO:0085238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis/trans-isomerase; also activates the phosphotyrosyl phosphatase activity of protein phosphatase 2A (PP2A); regulates G1 phase progression, the osmoresponse, microtubule dynamics; subunit of the Tap42p-Pph21p-Rrd2p complex; protein abundance increases in response to DNA replication stress","termid":"PBO:0085238"}


id: MONDO:0020775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation with defective fucosylation","termid":"MONDO:0060720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation with defective fucosylation 1","secondary_identifiers":["OMIM:618005"],"synonyms":[{"name":"CDGF1","type":"related"},{"name":"CONGENITAL DISORDER OF GLYCOSYLATION WITH DEFECTIVE FUCOSYLATION 1","type":"related"},{"name":"Cdgf","type":"related"}],"termid":"MONDO:0020775","xrefs":{"Monarch":{"xref_id":"0020775"}}}


id: GO:0045512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-26.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-26 binding","synonyms":[{"name":"IL-26 binding","type":"exact"}],"termid":"GO:0045512"}


id: GO:0004928
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with a member of the Wnt-family of signaling molecules to initiate a change in cell activity.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete frizzled receptor activity (obsolete GO:0004928)","synonyms":[{"name":"frizzled receptor activity","type":"exact"}],"termid":"GO:0004928"}


id: MONDO:0013359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial hyperaldosteronism type III (FH-III) is a rare heritable form of primary aldosteronism (PA) that is characterized by early-onset severe hypertension, non glucocorticoid-remediable hyperaldosteronism, overproduction of 18-oxocortisol and 18-hydroxycortisol, and profound hypokalemia.","definition_xrefs":["Orphanet:251274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperaldosteronism","termid":"MONDO:0016525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial hyperaldosteronism type III","secondary_identifiers":["GARD:12362","MEDGEN:824604","OMIM:613677","UMLS:C3838758","SCTID:703234002"],"synonyms":[{"name":"FH 3","type":"related"},{"name":"FH III","type":"related"},{"name":"FH-III","type":"exact"},{"name":"FH3","type":"exact"},{"name":"HALD3","type":"related"},{"name":"familial hyperaldosteronism type 3","type":"exact"},{"name":"hyperaldosteronism, familial, type 3","type":"related"},{"name":"hyperaldosteronism, familial, type III","type":"related"}],"termid":"MONDO:0013359","xrefs":{"Monarch":{"xref_id":"0013359"}}}


id: MONDO:0013323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cranioectodermal dysplasia in which the cause of the disease is a mutation in the WDR35 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranioectodermal dysplasia","termid":"MONDO:0009032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005093","MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"cranioectodermal dysplasia 2","secondary_identifiers":["UMLS:C3150874","GARD:15680","DOID:0080804","MEDGEN:462224","OMIM:613610"],"synonyms":[{"name":"CED2","type":"related"},{"name":"CRANIOECTODERMAL dysplasia 2","type":"related"},{"name":"Cranioectodermal dysplasia type 2","type":"exact"},{"name":"WDR35 cranioectodermal dysplasia","type":"exact"},{"name":"WDR35-related cranioectodermal dysplasia","type":"exact"},{"name":"cranioectodermal dysplasia 2","type":"exact"},{"name":"cranioectodermal dysplasia caused by mutation in WDR35","type":"exact"}],"termid":"MONDO:0013323","xrefs":{"Monarch":{"xref_id":"0013323"}}}


id: PBO:0063080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAPPA antisense RNA 2","termid":"PBO:0063080"}


id: PBO:0087249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine MAP kinase; coordinates expression of all 19S regulatory particle assembly-chaperones (RACs) to control proteasome abundance; involved in regulating maintenance of cell wall integrity, cell cycle progression, nuclear mRNA retention in heat shock, septum assembly; required for mitophagy, pexophagy; affects recruitment of mitochondria to phagophore assembly site; plays role in adaptive response of cells to cold; regulated by the PKC1-mediated signaling pathway","termid":"PBO:0087249"}


id: GO:0032940
data:
  {"annotated_genes":["SJAG_02368","SJAG_04343","SJAG_02004","SJAG_02518","SJAG_00332","SJAG_03246","SJAG_03864","SJAG_04509","SJAG_02572","SJAG_04966","SJAG_04044","SJAG_03938","SJAG_04960","SJAG_03718","SJAG_01772","SJAG_00430","SJAG_00661","SJAG_03763","SJAG_00826","SJAG_04058","SJAG_02753","SJAG_04517","SJAG_01697","SJAG_03754","SJAG_00280","SJAG_01563","SJAG_00355","SJAG_01448","SJAG_01722","SJAG_02366","SJAG_02320","SJAG_03915","SJAG_07004","SJAG_02587","SJAG_01925","SJAG_03499","SJAG_03357","SJAG_03005","SJAG_01048","SJAG_03536","SJAG_02012","SJAG_02166"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94192,117530,71128,89085,78352,71456,103004,71790,105428,95366,92347,97782,70674,72387,73703,88719,95332,113294,91803,91474,88312,71883,92600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006887"},{"annotations":[100516],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045921"},{"annotations":[88219,98725,94176],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0017157"},{"annotations":[60352,70177,118618,92661,75446,90903,80517,80144],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006904"},{"annotations":[66328,114543,88946,102262,60353,99885,118120,91073],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"}]},"cv_name":"biological_process","definition":"The controlled release of a substance by a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"},{"relation_name":"is_a","term_name":"export from cell","termid":"GO:0140352"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00280":null,"SJAG_00332":null,"SJAG_00355":null,"SJAG_00430":null,"SJAG_00661":null,"SJAG_00826":null,"SJAG_01048":null,"SJAG_01448":null,"SJAG_01563":null,"SJAG_01697":null,"SJAG_01722":null,"SJAG_01772":null,"SJAG_01925":null,"SJAG_02004":null,"SJAG_02012":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02366":null,"SJAG_02368":null,"SJAG_02518":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02753":null,"SJAG_03005":null,"SJAG_03246":null,"SJAG_03357":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03718":null,"SJAG_03754":null,"SJAG_03763":null,"SJAG_03864":null,"SJAG_03915":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04058":null,"SJAG_04343":null,"SJAG_04509":null,"SJAG_04517":null,"SJAG_04960":null,"SJAG_04966":null,"SJAG_07004":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"secretion by cell","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Secretion"],"synonyms":[{"name":"cellular secretion","type":"exact"}],"termid":"GO:0032940","terms_by_termid":{"GO:0006887":null,"GO:0006904":null,"GO:0017157":null,"GO:0045921":null,"GO:0090522":null}}


id: GO:0050621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + O2 = alpha,beta-didehydrotryptophan + H2O2 + H+.","definition_xrefs":["RHEA:19901","EC:1.3.3.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tryptophan alpha,beta-oxidase activity","secondary_identifiers":["KEGG_REACTION:R05317","MetaCyc:1.4.3.17-RXN"],"synonyms":[{"name":"L-tryptophan 2',3'-oxidase activity","type":"related"},{"name":"L-tryptophan alpha,beta-dehydrogenase activity","type":"related"},{"name":"L-tryptophan:oxygen alpha,beta-oxidoreductase activity","type":"related"},{"name":"tryptophan a,b-oxidase activity","type":"exact"}],"termid":"GO:0050621"}


id: SO:0000993
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence produced from an aligment algorithm that uses multiple sequences as input.","direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consensus","termid":"SO:0000993"}


id: MOD:00671
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with a acyloxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acylated residue","synonyms":[{"name":"OAcylRes","type":"exact"}],"termid":"MOD:00671"}


id: PBO:0049671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 3","termid":"PBO:0049671"}


id: PBO:0028145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleolus,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0028145"}


id: GO:0033440
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an ACG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"ACG codon-amino acid adaptor activity","synonyms":[{"name":"threonine tRNA","type":"related"}],"termid":"GO:0033440"}


id: PBO:0080344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 108 pseudogene","termid":"PBO:0080344"}


id: FYPO:0005548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to brefeldin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to brefeldin A","synonyms":[{"name":"increased protein phosphorylation during cellular response to brefeldin A during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to brefeldin A during vegetative growth","type":"exact"}],"termid":"FYPO:0005548"}


id: GO:0043151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of DNA that contributes to the process of double-strand break repair via single-strand annealing.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA repair","termid":"GO:0000731"},{"relation_name":"part_of","term_name":"double-strand break repair via single-strand annealing","termid":"GO:0045002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA synthesis involved in double-strand break repair via single-strand annealing","synonyms":[{"name":"DNA synthesis during double-strand break repair via single-strand annealing","type":"related"}],"termid":"GO:0043151"}


id: GO:0032367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol, cholest-5-en-3-beta-ol, within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol transport","termid":"GO:0030301"},{"relation_name":"is_a","term_name":"intracellular sterol transport","termid":"GO:0032366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"intracellular cholesterol transport","termid":"GO:0032367"}


id: PBO:0084569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane protein involved in zinc ion homeostasis; member of the four-protein IZH family; expression induced by fatty acids and altered zinc levels; deletion reduces sensitivity to excess zinc; possible role in sterol metabolism; protein increases in abundance and relocalizes from nucleus to ER upon DNA replication stress; IZH4 has a paralog, IZH1, that arose from the whole genome duplication","termid":"PBO:0084569"}


id: GO:0010932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of macrophage tolerance induction.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"macrophage tolerance induction","termid":"GO:0010931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage tolerance induction","termid":"GO:0010932"}


id: GO:1900936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"negative regulation of nonadec-1-ene metabolic process","termid":"GO:1900933"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene biosynthetic process","termid":"GO:1900935"},{"relation_name":"negatively_regulates","term_name":"nonadec-1-ene biosynthetic process","termid":"GO:1900877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nonadec-1-ene biosynthetic process","synonyms":[{"name":"down regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"down regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"down regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"down regulation of nonadec-1-ene formation","type":"exact"},{"name":"down regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"down-regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"down-regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"down-regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"down-regulation of nonadec-1-ene formation","type":"exact"},{"name":"down-regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"downregulation of nonadec-1-ene anabolism","type":"exact"},{"name":"downregulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"downregulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"downregulation of nonadec-1-ene formation","type":"exact"},{"name":"downregulation of nonadec-1-ene synthesis","type":"exact"},{"name":"inhibition of nonadec-1-ene anabolism","type":"exact"},{"name":"inhibition of nonadec-1-ene biosynthesis","type":"exact"},{"name":"inhibition of nonadec-1-ene biosynthetic process","type":"narrow"},{"name":"inhibition of nonadec-1-ene formation","type":"exact"},{"name":"inhibition of nonadec-1-ene synthesis","type":"exact"},{"name":"negative regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"negative regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"negative regulation of nonadec-1-ene formation","type":"exact"},{"name":"negative regulation of nonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900936"}


id: FYPO:0006307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actin filament severing is decreased. Actin filament severing is the process in which an actin filament is broken down into smaller filaments.","definition_xrefs":["PMID:22024167","PomBase:mah","GO:0051014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament-based process","termid":"FYPO:0006306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased actin filament severing","synonyms":[{"name":"decreased F-actin severing","type":"exact"},{"name":"decreased actin filament severing during mitotic cell cycle","type":"related"},{"name":"decreased actin filament severing during vegetative growth","type":"exact"},{"name":"reduced actin filament severing","type":"exact"}],"termid":"FYPO:0006307"}


id: PBO:0049120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR107 adjacent cis regulating lncRNA","termid":"PBO:0049120"}


id: FYECO:0000081
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[119649],"is_not":false,"summary":null,"term":"FYECO:0000081"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing yeast extract and other components. The concentration of glucose is very low (eg around 0.1%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"is_obsolete":false,"name":"low glucose YES","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"low glucose YE","type":"related"},{"name":"low glucose rich medium","type":"related"}],"termid":"FYECO:0000081","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000081":null}}


id: GO:0006712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mineralocorticoids, hormonal C21 corticosteroids synthesized from cholesterol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid catabolic process","termid":"GO:0006706"},{"relation_name":"is_a","term_name":"mineralocorticoid metabolic process","termid":"GO:0008212"},{"relation_name":"is_a","term_name":"hormone catabolic process","termid":"GO:0042447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"mineralocorticoid catabolic process","synonyms":[{"name":"mineralocorticoid breakdown","type":"exact"},{"name":"mineralocorticoid catabolism","type":"exact"},{"name":"mineralocorticoid degradation","type":"exact"}],"termid":"GO:0006712"}


id: PBO:0036034
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K12_acetylation_at_subtelomere_during_vegetative_growth","termid":"PBO:0036034"}


id: PBO:0091658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ferric-chelate reductase Frp1","termid":"PBO:0091658"}


id: MONDO:0010788
data:
  {"annotated_genes":["SJAG_MIT15","SJAG_MIT13","SJAG_MIT03"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85880,85881,85882],"is_not":false,"summary":null,"term":"MONDO:0010788"}]},"cv_name":"mondo","definition":"Leber's hereditary optic neuropathy (LHON) is a mitochondrial neurodegenerative disease affecting the optic nerve and often characterized by sudden vision loss in young adult carriers.","definition_xrefs":["Orphanet:104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"},{"relation_name":"is_a","term_name":"hereditary optic atrophy","termid":"MONDO:0043878"}],"gene_count":3,"genes_by_uniquename":{"SJAG_MIT03":null,"SJAG_MIT13":null,"SJAG_MIT15":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0005559","MONDO:0004069","MONDO:0005267"],"is_obsolete":false,"name":"Leber hereditary optic neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1018428959","SCTID:58610003","UMLS:C0917796","NCIT:C84808","MESH:D029242","GARD:6870","DOID:705","NANDO:1200940","OMIM:535000","MEDGEN:182973","NANDO:1200178"],"synonyms":[{"name":"LHON","type":"exact"},{"name":"Leber Hereditary optic atrophy","type":"exact"},{"name":"Leber hereditary optic neuropathy","type":"exact"},{"name":"Leber optic atrophy","type":"exact"},{"name":"Leber's hereditary optic neuropathy","type":"exact"},{"name":"Leber's optic atrophy","type":"exact"},{"name":"Leber’s disease","type":"related"},{"name":"optic atrophy, Leber type","type":"related"}],"termid":"MONDO:0010788","terms_by_termid":{"MONDO:0010788":null},"xrefs":{"Monarch":{"xref_id":"0010788"}}}


id: PBO:0059369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 2","termid":"PBO:0059369"}


id: GO:2001307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a xanthone-containing compound.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"xanthone-containing compound metabolic process","termid":"GO:2001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"xanthone-containing compound biosynthetic process","synonyms":[{"name":"xanthone biosynthesis","type":"narrow"},{"name":"xanthone biosynthetic process","type":"narrow"},{"name":"xanthone-containing compound anabolism","type":"exact"},{"name":"xanthone-containing compound biosynthesis","type":"exact"},{"name":"xanthone-containing compound formation","type":"exact"},{"name":"xanthone-containing compound synthesis","type":"exact"},{"name":"xanthones anabolism","type":"exact"},{"name":"xanthones biosynthesis","type":"exact"},{"name":"xanthones biosynthetic process","type":"exact"},{"name":"xanthones formation","type":"exact"},{"name":"xanthones synthesis","type":"exact"}],"termid":"GO:2001307"}


id: GO:0008829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dCTP + H2O = dUTP + NH3.","definition_xrefs":["EC:3.5.4.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"dCTP deaminase activity","secondary_identifiers":["Reactome:R-HSA-180632","MetaCyc:DCTP-DEAM-RXN","RHEA:22680"],"synonyms":[{"name":"5-methyl-dCTP deaminase activity","type":"related"},{"name":"dCTP aminohydrolase activity","type":"related"},{"name":"deoxycytidine triphosphate deaminase activity","type":"related"}],"termid":"GO:0008829"}


id: PBO:0062181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 2","termid":"PBO:0062181"}


id: FYPO:0007541
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, branched, has more than one nucleus and more than one septum, and has a larger volume and is longer, than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate multiseptate vegetative cell","termid":"FYPO:0001252"},{"relation_name":"is_a","term_name":"viable branched, elongated, multiseptate vegetative cell","termid":"FYPO:0003500"},{"relation_name":"is_a","term_name":"viable branched, swollen, elongated, multinucleate vegetative cell","termid":"FYPO:0006167"},{"relation_name":"is_a","term_name":"swollen elongated multiseptate vegetative cell","termid":"FYPO:0007436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0000631","FYPO:0000005","FYPO:0000032","FYPO:0005447"],"is_obsolete":false,"name":"viable branched, swollen, elongated, multinucleate, multiseptate vegetative cell","synonyms":[{"name":"viable branched, elongated, swollen, multinucleate, multiseptate vegetative cell","type":"exact"},{"name":"viable branched, swollen, elongated, multinucleate, multiseptate cell during vegetative growth","type":"exact"},{"name":"viable branched, swollen, elongated, multinucleate, multiseptate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007541"}


id: PBO:0030250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-trehalose_absent_from_cell_during_heat_shock","termid":"PBO:0030250"}


id: PBO:0056364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 6 pseudogene 1","termid":"PBO:0056364"}


id: PBO:0060610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding subunit 3","termid":"PBO:0060610"}


id: PBO:0047834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP4 antisense RNA 1","termid":"PBO:0047834"}


id: PBO:0049984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HILPDA antisense RNA 1","termid":"PBO:0049984"}


id: PBO:0083865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-BAR protein that regulates actin cytoskeleton organization; binds and bundles actin filaments, linking them to septins; required for cytokinesis, actin cable organization, and secretory vesicle trafficking; regulates actomyosin ring dynamics and septin localization; N-term. half controls cell size and actin cable levels, while the C-term. half controls actin cable organization, inhibiting Bnr1p-mediated actin nucleation; forms axial striations/pillars at the bud neck; phosphorylated by Dbf2p","termid":"PBO:0083865"}


id: GO:0086056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of an AV node cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in AV node cell action potential","synonyms":[{"name":"voltage-gated calcium channel activity involved in AV node cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated calcium channel activity involved in atrioventricular node cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086056"}


id: MONDO:0001449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of meningitis caused by lymphocytic choriomeningitis virus. mice and other rodents serve as the natural hosts, and infection in humans usually occurs through inhalation or ingestion of infectious particles. Clinical manifestations include an influenza-like syndrome followed by stiff neck, alterations of mentation, ataxia, and incontinence. Maternal infections may result in fetal malformations and injury, including neonatal hydrocephalus, aqueductal stenosis, chorioretinitis, and microcephaly. (From Joynt, Clinical Neurology, 1996, Ch26, pp1-3)","definition_xrefs":["MESH:D008216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Arenaviridae infectious disease","termid":"MONDO:0005650"},{"relation_name":"is_a","term_name":"viral meningitis","termid":"MONDO:0007015"},{"relation_name":"is_a","term_name":"viral infection of central nervous system","termid":"MONDO:0024318"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocytic choriomeningitis","secondary_identifiers":["ICD9:049.0","DOID:12155","ICD10CM:A87.2","icd11.foundation:307264938","UMLS:C0024266","MEDGEN:44220"],"synonyms":[{"name":"LCM","type":"exact"},{"name":"lymphocytic choriomeningitis mammarenavirus caused infectious meningitis","type":"exact"},{"name":"lymphocytic choriomeningitis mammarenavirus infectious meningitis","type":"exact"},{"name":"lymphocytic choriomeningitis virus encephalomyelitis","type":"exact"},{"name":"lymphocytic meningitis","type":"broad"},{"name":"lymphocytic meningoencephalitis","type":"exact"}],"termid":"MONDO:0001449","xrefs":{"Monarch":{"xref_id":"0001449"}}}


id: PBO:0077566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 272","termid":"PBO:0077566"}


id: MONDO:1012591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in tufted capuchin due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, tufted capuchin","secondary_identifiers":["OMIA:000202-9515"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Sapajus apella (Tufted capuchin)","type":"exact"}],"termid":"MONDO:1012591","xrefs":{"Monarch":{"xref_id":"1012591"}}}


id: GO:0032654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-11 production.","definition_xrefs":["PMID:29286137","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-11 production","termid":"GO:0032614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-11 production","secondary_identifiers":["GO:0150169","GO:0045363"],"synonyms":[{"name":"regulation of IL-11 production","type":"exact"},{"name":"regulation of interleukin-11 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-11 secretion","type":"narrow"}],"termid":"GO:0032654"}


id: MONDO:0015046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gamma-heavy chain disease (gamma-HCD) is a type of HCD characterized by the production of incomplete monoclonal gamma-heavy chains without associated light chains. The clinical presentation most commonly resembles that of patients with systemic lymphoproliferative/autoimmune diseases.","definition_xrefs":["Orphanet:100026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heavy chain disease","termid":"MONDO:0019464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"gamma-heavy chain disease","secondary_identifiers":["GARD:10346","icd11.foundation:705015637","NCIT:C3083","UMLS:C0018854","DOID:0060127","ICD9:273.2","MEDGEN:42374","SCTID:109984001"],"synonyms":[{"name":"Franklin disease","type":"exact"},{"name":"Franklin's disease","type":"exact"},{"name":"gamma heavy chain disease","type":"exact"},{"name":"gamma-HCD","type":"exact"}],"termid":"MONDO:0015046","xrefs":{"Monarch":{"xref_id":"0015046"}}}


id: GO:0043233
data:
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