# terms

id: MONDO:0003942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromophobe renal cell carcinoma","termid":"MONDO:0017885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"eosinophilic variant of chromophobe renal cell carcinoma","secondary_identifiers":["NCIT:C27889","DOID:6606","MEDGEN:232458","UMLS:C1333405"],"synonyms":[{"name":"eosinophilic variant of chromophobe renal cell carcinoma","type":"exact"}],"termid":"MONDO:0003942","xrefs":{"Monarch":{"xref_id":"0003942"}}}


id: PBO:0070452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 9","termid":"PBO:0070452"}


id: GO:0007079
data:
  {"annotated_genes":["SJAG_02761","SJAG_02336","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100721,104236,108624],"is_not":false,"summary":null,"term":"GO:0007079"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the directed movement of chromosomes from the center of the spindle towards the spindle poles occurs. This mediates by the shortening of microtubules attached to the chromosomes, during mitosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome movement towards spindle pole","termid":"GO:0051305"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0051179","GO:0008150","GO:0000070"],"is_obsolete":false,"name":"mitotic chromosome movement towards spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0007082"],"synonyms":[{"name":"chromosome migration to spindle pole during mitosis","type":"exact"},{"name":"chromosome movement towards spindle pole during mitosis","type":"exact"},{"name":"mitotic chromosome movement","type":"broad"},{"name":"mitotic chromosome movement to spindle pole","type":"exact"},{"name":"mitotic sister chromosome movement towards spindle pole","type":"exact"},{"name":"sister chromosome movement towards spindle pole during mitosis","type":"exact"}],"termid":"GO:0007079","terms_by_termid":{"GO:0007079":null}}


id: MONDO:0850519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An amino acid metabolic disorder that are characterized phenotypically by hyperphenylalaninemia, depletion of the neurotransmitters dopamine and serotonin, and progressive cognitive and motor deficits and that has material basis in autosomal recessive mutations in the genes encoding enzymes involved in the synthesis or regeneration of BH4.","definition_xrefs":["DOID:0081132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"tetrahydrobiopterin (BH4)-deficient hyperphenylalaninemia","termid":"MONDO:0850519","xrefs":{"Monarch":{"xref_id":"0850519"}}}


id: PBO:0052358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 6","termid":"PBO:0052358"}


id: GO:0009030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + thiamine phosphate = ADP + H+ + thiamine diphosphate.","definition_xrefs":["RHEA:15913","EC:2.7.4.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"thiamine-phosphate kinase activity","secondary_identifiers":["MetaCyc:THI-P-KIN-RXN","KEGG_REACTION:R00617"],"synonyms":[{"name":"ATP:thiamine-phosphate phosphotransferase activity","type":"related"},{"name":"thiamin monophosphatase activity","type":"related"},{"name":"thiamin monophosphokinase activity","type":"related"},{"name":"thiamin phosphate kinase activity","type":"exact"},{"name":"thiamin-monophosphate kinase activity","type":"related"},{"name":"thiamin-phosphate kinase activity","type":"exact"},{"name":"thiamine-monophosphate kinase activity","type":"related"}],"termid":"GO:0009030"}


id: PR:P37202
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex exonuclease RRP44 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03932","PANTHER:PTHR23355:SF13","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex exonuclease dis3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.10","secondary_identifiers":["UniProtKB:P37202"],"synonyms":[{"name":"Spom972h-DIS3","type":"exact"},{"name":"chromosome disjunction protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mitotic control protein dis3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ribosomal RNA-processing protein 44 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P37202"}


id: PBO:0113465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SAGA and SAGA-like transcriptional regulatory complexes; interacts with Spt15p to activate transcription of some RNA polymerase II-dependent genes, also functions to inhibit transcription at some promoters; role in preventing L-A mycovirus pathogenesis; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0113465"}


id: PBO:0000987
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.49","termid":"PBO:0000987"}


id: PBO:0086072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that may interact with ribosomes; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus; predicted to be involved in ribosome biogenesis","termid":"PBO:0086072"}


id: PBO:0063223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCDH9 antisense RNA 3","termid":"PBO:0063223"}


id: MONDO:1011157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoarthritis that occurs in domestic guinea pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis, non-human animal","termid":"MONDO:1010297"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, domestic guinea pig","secondary_identifiers":["OMIA:000747-10141"],"termid":"MONDO:1011157","xrefs":{"Monarch":{"xref_id":"1011157"}}}


id: MONDO:0003317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilms tumor arising in the remaining kidney following treatment of the original Wilms tumor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Wilms tumor 1","termid":"MONDO:0008679"},{"relation_name":"is_a","term_name":"kidney Wilms tumor","termid":"MONDO:0019004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"metachronous kidney Wilms' tumor","secondary_identifiers":["UMLS:C1334705","NCIT:C38158","DOID:5178","MEDGEN:233696"],"synonyms":[{"name":"metachronous Wilms tumor","type":"exact"},{"name":"metachronous Wilms tumor of the kidney","type":"exact"},{"name":"metachronous Wilms tumour","type":"exact"},{"name":"metachronous Wilms tumour of the kidney","type":"exact"},{"name":"metachronous Wilms' tumor","type":"exact"},{"name":"metachronous Wilms' tumour","type":"exact"}],"termid":"MONDO:0003317","xrefs":{"Monarch":{"xref_id":"0003317"}}}


id: GO:0099081
data:
  {"annotated_genes":["SJAG_01330","SJAG_02431","SJAG_02040","SJAG_04745","SJAG_00773","SJAG_00140","SJAG_01775","SJAG_03703","SJAG_02695","SJAG_03088","SJAG_00845","SJAG_02624","SJAG_00594","SJAG_01215","SJAG_03052","SJAG_02761","SJAG_03540","SJAG_01837","SJAG_00851","SJAG_00930","SJAG_02286","SJAG_01196","SJAG_01993","SJAG_01613","SJAG_02566","SJAG_04841","SJAG_00918","SJAG_05266","SJAG_00030","SJAG_04387","SJAG_05220","SJAG_02509","SJAG_03073","SJAG_03145","SJAG_03264","SJAG_01546","SJAG_04003","SJAG_01224","SJAG_01297","SJAG_00723","SJAG_04887","SJAG_00655","SJAG_02336","SJAG_05024","SJAG_02045","SJAG_00113","SJAG_00332","SJAG_02651"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76051,95615,76963,71912,109420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005884"},{"annotations":[107571,99537,112504,107783,104350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000235"},{"annotations":[98941,99538,91701,104220,108608,101762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055028"},{"annotations":[95536,97902,104084],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"},{"annotations":[75409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097268"},{"annotations":[105215,104885,91471,118535,113144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005881"},{"annotations":[97597],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062194"},{"annotations":[100704,119049,89942,114422,102657,104222,97300],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904511"},{"annotations":[88071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990574"},{"annotations":[119858,97093,74189,68459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005874"},{"annotations":[99543,100707],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036449"},{"annotations":[119844,71001,99545,104996,80229,79798],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035371"},{"annotations":[91705,79231,108614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061673"},{"annotations":[97303],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905721"},{"annotations":[107863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990941"},{"annotations":[101767,106676,100709,119055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990498"},{"annotations":[98945,99548,118541,107864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990537"},{"annotations":[118269,97979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032982"},{"annotations":[91708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005880"},{"annotations":[95106,101770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005827"},{"annotations":[97304,101771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905759"},{"annotations":[91710],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"},{"annotations":[63268,77392,100860,76680,104036,76112,90070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005876"}]},"cv_name":"cellular_component","definition":"A polymeric supramolecular structure.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular complex","termid":"GO:0099080"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00594":null,"SJAG_00655":null,"SJAG_00723":null,"SJAG_00773":null,"SJAG_00845":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01196":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01837":null,"SJAG_01993":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02566":null,"SJAG_02624":null,"SJAG_02651":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_03052":null,"SJAG_03073":null,"SJAG_03088":null,"SJAG_03145":null,"SJAG_03264":null,"SJAG_03540":null,"SJAG_03703":null,"SJAG_04003":null,"SJAG_04387":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04887":null,"SJAG_05024":null,"SJAG_05220":null,"SJAG_05266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"supramolecular polymer","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21802294":null,"PMID:30726171":null},"termid":"GO:0099081","terms_by_termid":{"GO:0000235":null,"GO:0005827":null,"GO:0005874":null,"GO:0005876":null,"GO:0005880":null,"GO:0005881":null,"GO:0005884":null,"GO:0032982":null,"GO:0035371":null,"GO:0036449":null,"GO:0055028":null,"GO:0061673":null,"GO:0062194":null,"GO:0097268":null,"GO:1903754":null,"GO:1904511":null,"GO:1905721":null,"GO:1905759":null,"GO:1905760":null,"GO:1990498":null,"GO:1990537":null,"GO:1990574":null,"GO:1990941":null}}


id: GO:0075235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of zoospore movement on or near host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of zoospore movement on or near host (obsolete GO:0075235)","synonyms":[{"name":"regulation of zoospore motility on or near host","type":"exact"}],"termid":"GO:0075235"}


id: GO:1990281
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is capable of efflux transmembrane transporter activity.","definition_xrefs":["PMID:9417051","GOC:dos","PMID:21556065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"efflux pump complex","synonyms":[{"name":"efflux pump","type":"exact"},{"name":"efflux transmembrane transporter complex","type":"exact"}],"termid":"GO:1990281"}


id: SO:0001154
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of four consecutive peptide residues, of which the i+2 residue is proline, and that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth and is characterized by the dihedral angles: Residue(i+1): phi ~ -120 degrees, psi ~ 120 degrees. Residue(i+2): phi ~ -60 degrees, psi ~ 0 degrees.","definition_xrefs":["PMID:2371257","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn_type_six","termid":"SO:0001150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_type_six_b","synonyms":[{"name":"beta turn type six b","type":"exact"},{"name":"type VIb beta turn","type":"exact"},{"name":"type VIb turn","type":"exact"}],"termid":"SO:0001154"}


id: PBO:0116622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 1 pseudogene 1","termid":"PBO:0116622"}


id: SO:0000215
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding cysteinyl tRNA (SO:0000258).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine_tRNA_primary_transcript","synonyms":[{"name":"cysteine tRNA primary transcript","type":"exact"}],"termid":"SO:0000215"}


id: PBO:0079314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 7","termid":"PBO:0079314"}


id: PBO:0048457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaryl-CoA dehydrogenase","termid":"PBO:0048457"}


id: MONDO:0021091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A serous or mucinous benign or low malignant potential cystic epithelial neoplasm. It is characterized by the presence of glandular epithelial cells forming papillary structures.","definition_xrefs":["NCIT:C2974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystadenoma","termid":"MONDO:0002369"},{"relation_name":"is_a","term_name":"papillary adenoma","termid":"MONDO:0002533"},{"relation_name":"is_a","term_name":"papillary cystic neoplasm","termid":"MONDO:0006349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary cystadenoma","secondary_identifiers":["MESH:D018292","ICDO:8450/0","MEDGEN:41386","UMLS:C0010636"],"synonyms":[{"name":"cystadenoma, papillary, benign","type":"exact"},{"name":"papillary cystadenoma","type":"exact"}],"termid":"MONDO:0021091","xrefs":{"Monarch":{"xref_id":"0021091"}}}


id: FYPO:0002251
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable and has a larger volume, and is longer, than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"swollen elongated cell","termid":"FYPO:0001429"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"inviable swollen elongated vegetative cell","synonyms":[{"name":"inviable elongated cell with increased cell volume","type":"exact"},{"name":"inviable enlarged elongated cell","type":"related"},{"name":"inviable large elongated cell","type":"related"},{"name":"inviable swollen elongated cell during vegetative growth","type":"exact"},{"name":"inviable swollen elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; swollen elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002251"}


id: MONDO:1012883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital disorder of glycosylation that occurs in cattle due to a mutation in the GALNT2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation, non-human animal","termid":"MONDO:1012966"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital disorder of glycosylation, GALNT2-related, cattle","secondary_identifiers":["OMIA:002375-9913"],"synonyms":[{"name":"small calf syndrome","type":"related"}],"termid":"MONDO:1012883","xrefs":{"Monarch":{"xref_id":"1012883"}}}


id: GO:1990538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + a xylan= CoA + an acetylated xylan.","definition_xrefs":["PMID:25141999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"xylan O-acetyltransferase activity","termid":"GO:1990538"}


id: PATO:0001941
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow and green hues.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"green","termid":"PATO:0000320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow green","termid":"PATO:0001941"}


id: MONDO:0018144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital myasthenic syndromes with glycosylation defect (obsolete MONDO:0018144)","secondary_identifiers":["Orphanet:353327"],"termid":"MONDO:0018144","xrefs":{"Monarch":{"xref_id":"0018144"}}}


id: PR:Q9P6P2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrp36 gene.","definition_xrefs":["UniProtKB:Q9P6P2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA biogenesis protein rrp36 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.04","synonyms":[{"name":"Spom972h-rrp36","type":"exact"},{"name":"ribosomal RNA-processing protein 36 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P2"}


id: PBO:0060817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal EF-hand calcium binding protein 2","termid":"PBO:0060817"}


id: GO:0061099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of protein tyrosine kinase activity.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein kinase activity","termid":"GO:0006469"},{"relation_name":"is_a","term_name":"negative regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050732"},{"relation_name":"is_a","term_name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein tyrosine kinase activity","termid":"GO:0061099"}


id: FYPO:0000157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which the response to DNA damage is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"abnormal response to DNA damage stimulus during vegetative growth","synonyms":[{"name":"abnormal response to DNA damage during vegetative growth","type":"exact"},{"name":"abnormal response to DNA damage stimulus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000157"}


id: FYPO:0007454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ATP binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ATP binding","termid":"FYPO:0003671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased ATP binding","synonyms":[{"name":"reduced ATP binding","type":"exact"}],"termid":"FYPO:0007454"}


id: PBO:0044612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 13 pseudogene 3","termid":"PBO:0044612"}


id: PBO:0077106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 10","termid":"PBO:0077106"}


id: PBO:0041561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 73","termid":"PBO:0041561"}


id: GO:0045665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of neuron differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"negatively_regulates","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron differentiation","synonyms":[{"name":"down regulation of neuron differentiation","type":"exact"},{"name":"down-regulation of neuron differentiation","type":"exact"},{"name":"downregulation of neuron differentiation","type":"exact"},{"name":"inhibition of neuron differentiation","type":"narrow"}],"termid":"GO:0045665"}


id: PBO:0060191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 12, cell surface associated","termid":"PBO:0060191"}


id: GO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a pre-B cell. Pre-B cells follow the pro-B cell stage of immature B cell differentiation and undergo rearrangement of heavy chain V, D, and J gene segments.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immature B cell differentiation","termid":"GO:0002327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pre-B cell differentiation","synonyms":[{"name":"pre-B cell development","type":"related"},{"name":"pre-B lymphocyte differentiation","type":"exact"}],"termid":"GO:0002329"}


id: GO:0047199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-sn-glycero-3-phosphocholine + dolichol = 1-acyl-sn-glycero-3-phosphocholine + acyldolichol.","definition_xrefs":["EC:2.3.1.83","RHEA:19285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"phosphatidylcholine-dolichol O-acyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04227","MetaCyc:2.3.1.83-RXN"],"synonyms":[{"name":"3-sn-phosphatidylcholine:dolichol O-acyltransferase activity","type":"related"}],"termid":"GO:0047199"}


id: GO:0035695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which cells degrade mitochondria by inducing a vacuole-like structure which directly engulfs and degrades the unhealthy mitochondria by accumulating lysosomes.","definition_xrefs":["GOC:sp","GOC:bf","PMID:21264228","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy of mitochondrion","termid":"GO:0000422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"mitophagy by internal vacuole formation","synonyms":[{"name":"MIV-mediated mitophagy","type":"narrow"}],"termid":"GO:0035695"}


id: GO:0046008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the receptiveness of a female to male advances subsequent to mating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of female receptivity","termid":"GO:0045924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of female receptivity, post-mating","termid":"GO:0046008"}


id: SO:0000207
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"SSLP are a kind of sequence alteration where the number of repeated sequences in intergenic regions may differ.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_length_alteration","termid":"SO:0000248"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simple_sequence_length_variation","secondary_identifiers":["http://en.wikipedia.org/wiki/Simple_sequence_length_polymorphism"],"synonyms":[{"name":"SSLP","type":"related"},{"name":"simple sequence length polymorphism","type":"related"},{"name":"simple sequence length variation","type":"exact"}],"termid":"SO:0000207"}


id: GO:1990725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a cord factor, an M. tuberculosis cell wall glycolipid, and transmitting a signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["PMID:23602766","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"cord factor receptor activity","secondary_identifiers":["Wikipedia:Cord_factor"],"synonyms":[{"name":"TMD receptor activity","type":"exact"},{"name":"trehalose 6,6'-dimycolate receptor activity","type":"exact"}],"termid":"GO:1990725"}


id: FYECO:0000079
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which thiabendazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ thiabendazole","synonyms":[{"name":"TBZ added","type":"exact"}],"termid":"FYECO:0000079"}


id: PBO:0044613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 15","termid":"PBO:0044613"}


id: GO:0030398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The controlled breakdown of the membranes of cargo-carrying vesicles formed during peroxisome degradation.","definition_xrefs":["PMID:11382760","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal membrane disassembly (obsolete GO:0030398)","synonyms":[{"name":"peroxisomal membrane breakdown","type":"exact"},{"name":"peroxisomal membrane catabolism","type":"exact"},{"name":"peroxisomal membrane degradation","type":"exact"}],"termid":"GO:0030398"}


id: GO:0070841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an inclusion body.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"inclusion body assembly","termid":"GO:0070841"}


id: MONDO:0016945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 8p duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the short arm (p) of chromosome 8. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 8p duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Most cases are not inherited, but people can pass the duplication on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 8","termid":"MONDO:0016929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 8","secondary_identifiers":["Orphanet:262758","MEDGEN:1632060","UMLS:C4708597","icd11.foundation:1325415519","GARD:5361"],"synonyms":[{"name":"8p duplication","type":"related"},{"name":"8p trisomy","type":"related"},{"name":"Duplication 8p","type":"related"},{"name":"chromosome 8p duplication","type":"related"},{"name":"partial duplication of chromosome 8p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 8","type":"exact"},{"name":"partial trisomy 8p","type":"related"},{"name":"partial trisomy of chromosome 8p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 8","type":"exact"},{"name":"trisomy 8p","type":"related"}],"termid":"MONDO:0016945","xrefs":{"Monarch":{"xref_id":"0016945"}}}


id: GO:0061504
data:
  {"annotated_genes":["SJAG_02084"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80678],"is_not":false,"summary":null,"term":"GO:0061504"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyclic threonylcarbamoyladenosine, a modified nucleoside found in some tRNA molecules.","definition_xrefs":["PMID:23242255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02084":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"cyclic threonylcarbamoyladenosine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0061504","terms_by_termid":{"GO:0061504":null}}


id: MONDO:0022545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Barnicoat Baraitser syndrome","synonyms":[{"name":"Barnicoat-Baraitser syndrome","type":"related"},{"name":"polysyndactyly overgrowth syndrome","type":"related"}],"termid":"MONDO:0022545","xrefs":{"Monarch":{"xref_id":"0022545"}}}


id: PBO:0039801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptosis resistant E3 ubiquitin protein ligase 1","termid":"PBO:0039801"}


id: PBO:0029376
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_double-strand_break_processing","termid":"PBO:0029376"}


id: GO:0031038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a bipolar filament composed of myosin II molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin filament organization","termid":"GO:0031033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"myosin II filament organization","synonyms":[{"name":"myosin II filament assembly or disassembly","type":"related"},{"name":"myosin II filament organisation","type":"exact"},{"name":"myosin II polymerization or depolymerization","type":"related"}],"termid":"GO:0031038"}


id: MONDO:1010306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrodysplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrodysplasia, non-human animal","secondary_identifiers":["OMIA:001315"],"termid":"MONDO:1010306","xrefs":{"Monarch":{"xref_id":"1010306"}}}


id: GO:1902339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic process involved in morphogenesis.","definition_xrefs":["GOC:sart","GOC:TermGenie","PMID:12202035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in morphogenesis","termid":"GO:1902337"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in morphogenesis","synonyms":[{"name":"activation of apoptosis involved in development","type":"related"},{"name":"activation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"activation of apoptotic process involved in morphogenesis","type":"narrow"},{"name":"activation of morphogenetic apoptosis","type":"related"},{"name":"positive regulation of apoptosis involved in development","type":"related"},{"name":"positive regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"positive regulation of morphogenetic apoptosis","type":"related"},{"name":"up regulation of apoptosis involved in development","type":"related"},{"name":"up regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"up regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"up regulation of morphogenetic apoptosis","type":"related"},{"name":"up-regulation of apoptosis involved in development","type":"related"},{"name":"up-regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"up-regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"up-regulation of morphogenetic apoptosis","type":"related"},{"name":"upregulation of apoptosis involved in development","type":"related"},{"name":"upregulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"upregulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"upregulation of morphogenetic apoptosis","type":"related"}],"termid":"GO:1902339"}


id: PATO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000184 arousal (obsolete PATO:0000184)","termid":"PATO:0000184"}


id: GO:0009724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an abscisic acid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to abscisic acid","termid":"GO:0009737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of abscisic acid stimulus","synonyms":[{"name":"perception of abscisic acid stimulus","type":"related"}],"termid":"GO:0009724"}


id: MONDO:0016509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcornea-posterior megalolenticonus-persistent fetal vasculature-coloboma syndrome","secondary_identifiers":["Orphanet:231736","UMLS:C4751163","GARD:10938","MEDGEN:1667341"],"synonyms":[{"name":"MPPC syndrome","type":"exact"},{"name":"microcornea posterior megalolenticonus persistent fetal vasculature coloboma","type":"related"},{"name":"microcornea posterior megalolenticonus persistent foetal vasculature coloboma","type":"related"}],"termid":"MONDO:0016509","xrefs":{"Monarch":{"xref_id":"0016509"}}}


id: MONDO:0001985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A partial occlusion of the retinal artery.","definition_xrefs":["NCIT:C35192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal artery occlusion","termid":"MONDO:0006948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"partial arterial retinal occlusion","secondary_identifiers":["ICD9:362.33","MEDGEN:57599","SCTID:776009","UMLS:C0154839","DOID:14522"],"synonyms":[{"name":"partial retinal arterial occlusion","type":"exact"},{"name":"retinal partial arterial occlusion","type":"exact"}],"termid":"MONDO:0001985","xrefs":{"Monarch":{"xref_id":"0001985"}}}


id: GO:0002901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a B cell that is mature, having left the bone marrow.","definition_xrefs":["ISBN:0781735149","GOC:add","CL:0000785","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell apoptotic process","termid":"GO:0001783"},{"relation_name":"part_of","term_name":"B cell homeostasis","termid":"GO:0001782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature B cell apoptotic process","synonyms":[{"name":"apoptosis of mature B cells","type":"exact"},{"name":"apoptosis of mature B lymphocytes","type":"exact"},{"name":"apoptosis of mature B-cells","type":"exact"},{"name":"apoptosis of mature B-lymphocytes","type":"exact"},{"name":"mature B cell apoptosis","type":"narrow"},{"name":"mature B cell programmed cell death by apoptosis","type":"exact"},{"name":"mature B lymphocyte apoptosis","type":"exact"},{"name":"mature B lymphocyte programmed cell death by apoptosis","type":"exact"},{"name":"mature B-cell apoptosis","type":"exact"},{"name":"mature B-cell programmed cell death by apoptosis","type":"exact"},{"name":"mature B-lymphocyte apoptosis","type":"exact"},{"name":"mature B-lymphocyte programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of mature B cells by apoptosis","type":"exact"},{"name":"programmed cell death of mature B lymphocytes by apoptosis","type":"exact"},{"name":"programmed cell death of mature B-cells by apoptosis","type":"exact"},{"name":"programmed cell death of mature B-lymphocytes by apoptosis","type":"exact"},{"name":"programmed cell death, mature B cells","type":"exact"},{"name":"programmed cell death, mature B lymphocytes","type":"exact"},{"name":"programmed cell death, mature B-cells","type":"exact"},{"name":"programmed cell death, mature B-lymphocytes","type":"exact"}],"termid":"GO:0002901"}


id: MONDO:0017711
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic triacylglycerol lipase deficiency","termid":"MONDO:0013700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic colipase deficiency","secondary_identifiers":["UMLS:C0268241","GARD:17402","ICD10CM:K90.3","Orphanet:309108","icd11.foundation:11281354","ICD9:277.89","MEDGEN:452357","SCTID:69478001"],"termid":"MONDO:0017711","xrefs":{"Monarch":{"xref_id":"0017711"}}}


id: PBO:0111299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein, TspO/MBR-related, tspO","termid":"PBO:0111299"}


id: PR:Q9UTB5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psd2 gene.","definition_xrefs":["UniProtKB:Q9UTB5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine decarboxylase proenzyme 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.03","synonyms":[{"name":"Spom972h-psd2","type":"exact"}],"termid":"PR:Q9UTB5"}


id: PBO:0031533
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine_amidase_activity","termid":"PBO:0031533"}


id: GO:2000278
data:
  {"annotated_genes":["SJAG_00573","SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112136],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904332"},{"annotations":[77240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032210"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA biosynthetic process","termid":"GO:0071897"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_02194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA anabolism","type":"exact"},{"name":"regulation of DNA biosynthesis","type":"exact"},{"name":"regulation of DNA formation","type":"exact"},{"name":"regulation of DNA synthesis","type":"exact"}],"termid":"GO:2000278","terms_by_termid":{"GO:0032210":null,"GO:1904332":null}}


id: MONDO:0015676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperandrogenism due to cortisone reductase deficiency (obsolete MONDO:0015676)","termid":"MONDO:0015676","xrefs":{"Monarch":{"xref_id":"0015676"}}}


id: PBO:0079469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinfilin 1 pseudogene 1","termid":"PBO:0079469"}


id: MONDO:0011686
data:
  {"annotated_genes":["SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87399],"is_not":false,"summary":null,"term":"MONDO:0011686"}]},"cv_name":"mondo","definition":"LIG4 syndrome is a hereditary disorder associated with impaired DNA double-strand break repair mechanisms and characterized by microcephaly, unusual facial features, growth and developmental delay, skin anomalies, and pancytopenia, which is associated with combined immunodeficiency (CID).","definition_xrefs":["Orphanet:99812"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"DNA ligase IV deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:339855","UMLS:C1847827","GARD:15000","DOID:0060021","OMIM:606593","NCIT:C122657","MESH:C564694","SCTID:724177005"],"synonyms":[{"name":"DNA ligase IV deficiency","type":"exact"},{"name":"LIG4 syndrome","type":"exact"},{"name":"ligase 4 syndrome","type":"exact"}],"termid":"MONDO:0011686","terms_by_termid":{"MONDO:0011686":null},"xrefs":{"Monarch":{"xref_id":"0011686"}}}


id: PR:O59700
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfs3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C36.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36.03c","synonyms":[{"name":"Spom972h-mfs3","type":"exact"}],"termid":"PR:O59700"}


id: PBO:0054970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2384","termid":"PBO:0054970"}


id: PBO:0041992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 38","termid":"PBO:0041992"}


id: MONDO:0011116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lung agenesis - heart defect - thumb anomalies is a very rare syndrome characterized by unilateral complete or partial lung agenesis, congenital cardiac defects and ipsilateral thumb anomalies.","definition_xrefs":["Orphanet:1120"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic respiratory or mediastinal malformation (obsolete MONDO:0015221)","termid":"MONDO:0015221"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung agenesis-heart defect-thumb anomalies syndrome","secondary_identifiers":["MEDGEN:477585","OMIM:601612","GARD:3378","SCTID:721976003","UMLS:C3275954","MESH:C535708"],"synonyms":[{"name":"LACHT","type":"related"},{"name":"Manouvrier syndrome","type":"related"},{"name":"Mardini-Nyhan association","type":"related"},{"name":"Mardini-Nyhan syndrome","type":"exact"},{"name":"lung agenesis heart defect thumb anomalies","type":"related"},{"name":"lung agenesis, congenital heart defects, and thumb anomalies syndrome","type":"related"},{"name":"pulmonary aplasia and triphalangia of the thumb","type":"related"}],"termid":"MONDO:0011116","xrefs":{"Monarch":{"xref_id":"0011116"}}}


id: GO:0034396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the rate of transcription from an RNA polymerase II promoter in response to an iron stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to iron (obsolete GO:0034396)","synonyms":[{"name":"down regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter in response to iron","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter in response to iron","type":"narrow"},{"name":"negative regulation of transcription from Pol II promoter in response to iron","type":"exact"}],"termid":"GO:0034396"}


id: GO:0075338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of growth or development of symbiont during interaction with host (obsolete GO:0075338)","synonyms":[{"name":"modulation of growth or development of symbiont during interaction with host","type":"exact"}],"termid":"GO:0075338"}


id: GO:1904240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of VCP-NPL4-UFD1 AAA ATPase complex assembly.","definition_xrefs":["GO_REF:0000058","GOC:PARL","PMID:17000876","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904239"},{"relation_name":"negatively_regulates","term_name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"down regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"down regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"down regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"down regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"down regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"down regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"down-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"down-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"down-regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"down-regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"down-regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"down-regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"downregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"downregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"downregulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"downregulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"downregulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"downregulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"inhibition of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"inhibition of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"inhibition of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"narrow"},{"name":"inhibition of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"narrow"},{"name":"inhibition of p97-Ufd1-Npl4 complex assembly","type":"narrow"},{"name":"inhibition of p97-Ufd1-Npl4 complex formation","type":"narrow"},{"name":"negative regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"negative regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"negative regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"negative regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"negative regulation of p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904240"}


id: PBO:0042145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 4 like 1","termid":"PBO:0042145"}


id: PBO:0002686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMR and DUF1771 domain protein (predicted)","termid":"PBO:0002686"}


id: PBO:0091625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sulfate transmembrane transporter Sul2","termid":"PBO:0091625"}


id: MONDO:0000419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 3-Methylcrotonyl-CoA carboxylase deficiency (obsolete MONDO:0000419)","termid":"MONDO:0000419","xrefs":{"Monarch":{"xref_id":"0000419"}}}


id: MOD:02022
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-cervonoyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-cervonoylated residue","termid":"MOD:02023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01875","MOD:01155"],"is_obsolete":false,"name":"N6-cervonoyl-L-lysine","termid":"MOD:02022"}


id: PBO:0046781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EYA transcriptional coactivator and phosphatase 2","termid":"PBO:0046781"}


id: PBO:0113316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in regulation of pheromone response and mating; contains transmembrane domains; involved in secretion of proteins that lack classical secretory signal sequences; component of the detergent-insoluble glycolipid-enriched complexes (DIGs); NCE102 has a paralog, FHN1, that arose from the whole genome duplication","termid":"PBO:0113316"}


id: GO:0003330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the controlled release of molecules that form the extracellular matrix, including carbohydrates and glycoproteins by a cell or a group of cells.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"extracellular matrix constituent secretion","termid":"GO:0070278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of extracellular matrix constituent secretion","termid":"GO:0003330"}


id: GO:0051316
data:
  {"annotated_genes":["SJAG_00918","SJAG_03220","SJAG_01371","SJAG_02814","SJAG_03989","SJAG_01278","SJAG_03437","SJAG_02346","SJAG_01837","SJAG_05266","SJAG_03327","SJAG_03926","SJAG_02731","SJAG_00418","SJAG_01805","SJAG_04076","SJAG_01211","SJAG_03217","SJAG_00794","SJAG_01775","SJAG_05319","SJAG_05220","SJAG_03683","SJAG_01224","SJAG_04508","SJAG_00678"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94159,88187],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051456"},{"annotations":[117071],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904967"},{"annotations":[110731,89467,110264,109256,90073,100863,105833,107870,108187,94140,110688,101679,114483,116314,98958,117306,91310,95648,95894,109513,113614,102778,98236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis.","definition_xrefs":["GOC:ai","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic metaphase chromosome alignment","termid":"GO:0051311"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00678":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04508":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"attachment of meiotic spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0051317"],"synonyms":[{"name":"attachment of spindle microtubules to kinetochore during meiosis","type":"related"},{"name":"attachment of spindle microtubules to kinetochore during meiotic chromosome segregation","type":"related"},{"name":"attachment of spindle microtubules to meiotic chromosome","type":"exact"}],"termid":"GO:0051316","terms_by_termid":{"GO:0051455":null,"GO:0051456":null,"GO:1904967":null}}


id: PBO:0068542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 148, pseudogene","termid":"PBO:0068542"}


id: GO:0120210
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Rod telodendria are projections that originate from the rod pedicle and form gap junctions with other photoreceptors within the outer plexiform layer of the retina.","definition_xrefs":["GOC:krc","PMID:14755521","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telodendria","termid":"GO:0120208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rod telodendria","termid":"GO:0120210"}


id: PBO:0047810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXL3 overlapping transcript 1","termid":"PBO:0047810"}


id: MONDO:0008104
data:
  {"annotated_genes":["SJAG_00993","SJAG_02342","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87589,87590,87591],"is_not":false,"summary":null,"term":"MONDO:0008104"}]},"cv_name":"mondo","definition":"Noonan syndrome caused by mutations in the PTPN11 gene.","definition_xrefs":["NCIT:C75459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome","termid":"MONDO:0018997"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005267"],"is_obsolete":false,"name":"Noonan syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4551602","OMIM:163950","MEDGEN:1638960","DOID:0060578","GARD:7223"],"synonyms":[{"name":"Male Turner syndrome","type":"related"},{"name":"NS1","type":"exact"},{"name":"Noonan syndrome","type":"related"},{"name":"Noonan syndrome 1","type":"exact"},{"name":"Noonan syndrome type 1","type":"exact"},{"name":"Turner phenotype with normal karyotype","type":"related"},{"name":"female pseudo-Turner syndrome","type":"related"},{"name":"pterygium colli syndrome","type":"related"}],"termid":"MONDO:0008104","terms_by_termid":{"MONDO:0008104":null},"xrefs":{"Monarch":{"xref_id":"0008104"}}}


id: GO:0033033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a myeloid cell apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"negatively_regulates","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myeloid cell apoptotic process","synonyms":[{"name":"down regulation of myeloid cell apoptosis","type":"exact"},{"name":"down-regulation of myeloid cell apoptosis","type":"exact"},{"name":"downregulation of myeloid cell apoptosis","type":"exact"},{"name":"inhibition of myeloid cell apoptosis","type":"narrow"},{"name":"negative regulation of myeloid cell apoptosis","type":"narrow"}],"termid":"GO:0033033"}


id: FYPO:0005080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:21151114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric heterochromatin","termid":"FYPO:0008154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to heterochromatin at centromere inner repeat","synonyms":[{"name":"normal protein localisation to chromatin at centromere inner repeat","type":"exact"},{"name":"normal protein localization to chromatin at centromere imr","type":"exact"},{"name":"normal protein localization to chromatin at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0005080"}


id: PR:Q9URZ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mel1 gene.","definition_xrefs":["UniProtKB:Q9URZ0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-galactosidase mel1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.07c","synonyms":[{"name":"Melibiase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-mel1","type":"exact"},{"name":"alpha-D-galactoside galactohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URZ0"}


id: PBO:0072888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding kinase family member 3","termid":"PBO:0072888"}


id: GO:0004354
data:
  {"annotated_genes":["SJAG_03266"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73400],"is_not":false,"summary":null,"term":"GO:0004354"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + H2O + NADP+ = 2-oxoglutarate + NH3 + NADPH + H+.","definition_xrefs":["EC:1.4.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate dehydrogenase [NAD(P)+] activity","termid":"GO:0004353"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glutamate dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:11612","MetaCyc:GLUTDEHYD-RXN"],"synonyms":[{"name":"L-glutamate dehydrogenase","type":"broad"},{"name":"L-glutamate:NADP+ oxidoreductase (deaminating)","type":"related"},{"name":"L-glutamic acid dehydrogenase activity","type":"related"},{"name":"NAD(P)-glutamate dehydrogenase activity","type":"related"},{"name":"NAD(P)H-dependent glutamate dehydrogenase activity","type":"related"},{"name":"dehydrogenase, glutamate (nicotinamide adenine dinucleotide (phosphate))","type":"related"},{"name":"glutamic acid dehydrogenase","type":"broad"},{"name":"glutamic dehydrogenase activity","type":"broad"}],"termid":"GO:0004354","terms_by_termid":{"GO:0004354":null}}


id: PBO:0062489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 5 pseudogene","termid":"PBO:0062489"}


id: GO:0071978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Bacterial-type flagellum-dependent cell motility in which the action of numerous flagella results in the smooth movement of a group of cells along a solid surface. Swarming motility is observed in groups of bacteria.","definition_xrefs":["PMID:14527279","GOC:cilia","PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial-type flagellum-dependent cell motility","termid":"GO:0071973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bacterial-type flagellum-dependent swarming motility","synonyms":[{"name":"bacterial-type flagellar swarming motility","type":"related"},{"name":"bacterial-type flagellum-mediated cell swarming","type":"exact"}],"termid":"GO:0071978"}


id: GO:0008167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sigma virus replication (obsolete GO:0008167)","synonyms":[{"name":"sigma virus replication","type":"exact"}],"termid":"GO:0008167"}


id: FYPO:0001245
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cobalt ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to cobalt","synonyms":[{"name":"hypersensitive to cobalt","type":"exact"},{"name":"sensitive to cobalt during mitotic cell cycle","type":"related"},{"name":"sensitive to cobalt during vegetative growth","type":"exact"},{"name":"sensitive to cobalt ions","type":"exact"}],"termid":"FYPO:0001245"}


id: FYPO:0000161
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"}],"single_locus_phenotype":[{"annotations":[119742,120039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[119730,119749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which contractile ring assembly is abnormal. Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["PomBase:mah","GO:1903475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis during vegetative growth","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000032","FYPO:0005447","FYPO:0000002","FYPO:0004803","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abnormal actomyosin contractile ring assembly","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_01143"],"single_locus_genotype_uniquenames":["sty1delta","mid1delta"],"synonyms":[{"name":"abnormal actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"abnormal actomyosin contractile ring formation","type":"related"},{"name":"abnormal contractile ring assembly","type":"exact"},{"name":"abnormal cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"abnormal cytokinetic contractile ring assembly","type":"exact"},{"name":"abnormal cytokinetic ring assembly","type":"related"},{"name":"abnormal cytokinetic ring formation","type":"related"},{"name":"abnormal mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0000161","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000248":null,"FYPO:0000729":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null}}


id: GO:0102063
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = diphosphoric acid + (-)-beta-curcumene.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-curcumene synthase activity (obsolete GO:0102063)","termid":"GO:0102063"}


id: PBO:0090111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI-coated vesicle associated protein","termid":"PBO:0090111"}


id: GO:0000205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAP kinase activity in the context of sporulation. As in, but not restricted to, the taxon Saccharomyces (Saccharomyces, ncbi_taxonomy_id:4930).","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK during sporulation (sensu Saccharomyces) (obsolete GO:0000205)","synonyms":[{"name":"activation of MAPK during sporulation (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0000205"}


id: PBO:0052572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 5A","termid":"PBO:0052572"}


id: PBO:0017631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase activator Whi2","termid":"PBO:0017631"}


id: GO:0046352
data:
  {"annotated_genes":["SJAG_04301","SJAG_03824","SJAG_04859","SJAG_02949","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101938,101939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000025"},{"annotations":[68316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005995"},{"annotations":[77163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005987"},{"annotations":[71960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005993"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of disaccharides, sugars composed of two monosaccharide units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"},{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_02949":null,"SJAG_03824":null,"SJAG_04301":null,"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"disaccharide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"disaccharide breakdown","type":"exact"},{"name":"disaccharide catabolism","type":"exact"},{"name":"disaccharide degradation","type":"exact"}],"termid":"GO:0046352","terms_by_termid":{"GO:0000025":null,"GO:0005987":null,"GO:0005993":null,"GO:0005995":null}}


id: PBO:0059374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 7","termid":"PBO:0059374"}


id: PBO:0083755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential DNA-binding transcription regulator that binds many loci; involved in transcription activation, repression, chromatin silencing, telomere length maintenance; represses divergent noncoding transcription at highly expressed genes, prevents transcription initiation at cryptic promoters near its binding sites; relocalizes to cytosol under hypoxia; recruits Sir complex to telomeric DNA; present in quiescent cell telomere hyperclusters","termid":"PBO:0083755"}


id: MONDO:0019961
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete somatostatinoma (obsolete MONDO:0019961)","termid":"MONDO:0019961","xrefs":{"Monarch":{"xref_id":"0019961"}}}


id: PR:O13790
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal/metazoan cullin-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01505","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.12","secondary_identifiers":["UniProtKB:O13790"],"synonyms":[{"name":"Cul-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CUL1","type":"exact"},{"name":"cell division control 53 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13790"}


id: GO:0044141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the symbiont's progression from an initial condition to a later condition, on or near the cells or tissues of the host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of development of symbiont on or near host surface (obsolete GO:0044141)","termid":"GO:0044141"}


id: PR:G2TRT4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP domain-containing new25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.21","synonyms":[{"name":"Spom972h-new25","type":"exact"}],"termid":"PR:G2TRT4"}


id: PATO:0002154
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards the abdomen of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splayed","termid":"PATO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splayed ventral","synonyms":[{"name":"splayed anterior (human torso)","type":"exact"},{"name":"splayed inferior (human head)","type":"exact"}],"termid":"PATO:0002154"}


id: MONDO:0003629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uterine corpus serous adenocarcinoma (obsolete MONDO:0003629)","termid":"MONDO:0003629","xrefs":{"Monarch":{"xref_id":"0003629"}}}


id: MOD:01980
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to N4-glycosyl-arginine.","definition_xrefs":["Unimod:41#R","PubMed:9536051","PubMed:15279557","RESID:AA0327","PubMed:8521968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycosylated residue","termid":"MOD:00006"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"omega-N-glycosyl-L-arginine","synonyms":[{"name":"(2S)-2-amino-5-(beta-D-glucopyranosyl[imino(methylamino)methyl]amino)pentanoic acid","type":"exact"},{"name":"Hex","type":"related"},{"name":"Hexose","type":"related"},{"name":"NG-beta-D-glucosylarginine","type":"exact"},{"name":"omega-N-(beta-D-glucosyl)-L-arginine","type":"exact"},{"name":"omega-N-glucosyl-L-arginine","type":"exact"},{"name":"omega-N-glycosyl-L-arginine","type":"exact"}],"termid":"MOD:01980"}


id: PBO:0051686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inka box actin regulator 2","termid":"PBO:0051686"}


id: PBO:0046425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A10","termid":"PBO:0046425"}


id: FYPO:0004827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell dies as it goes through mitosis, usually as a result of abnormal chromosome and spindle dynamics.","definition_xrefs":["PMID:16824200","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable vegetative cell with cell death during mitosis","synonyms":[{"name":"inviable cell with cell death during mitosis during vegetative growth","type":"exact"},{"name":"inviable vegetative cell with cell death during mitosis during mitotic cell cycle","type":"related"},{"name":"lethal; vegetative cell with cell death during mitosis","type":"exact"}],"termid":"FYPO:0004827"}


id: MOD:01491
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ4plex-114 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","termid":"MOD:01485"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-114 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex114","type":"related"}],"termid":"MOD:01491"}


id: PBO:0040103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aristaless related homeobox","termid":"PBO:0040103"}


id: PATO:0000596
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased volume","synonyms":[{"name":"low volume","type":"exact"},{"name":"small volume","type":"related"}],"termid":"PATO:0000596"}


id: PBO:0029106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_proline_level","termid":"PBO:0029106"}


id: PBO:0028295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dioxygenase_activity","termid":"PBO:0028295"}


id: PBO:0009930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peloto ortholog (predicted)","termid":"PBO:0009930"}


id: MONDO:0004578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinoschisis","termid":"MONDO:0004579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"flat retinoschisis","secondary_identifiers":["DOID:8464","SCTID:83405000","UMLS:C0154817","MEDGEN:509672","ICD9:361.11"],"termid":"MONDO:0004578","xrefs":{"Monarch":{"xref_id":"0004578"}}}


id: GO:0048243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of norepinephrine by a cell. Norepinephrine is a catecholamine and it acts as a hormone and as a neurotransmitter of most of the sympathetic nervous system.","definition_xrefs":["GOC:ef","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"norepinephrine transport","termid":"GO:0015874"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"is_a","term_name":"catecholamine secretion","termid":"GO:0050432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"norepinephrine secretion","synonyms":[{"name":"noradrenaline secretion","type":"exact"}],"termid":"GO:0048243"}


id: GO:0045848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nitrogen utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitrogen utilization","termid":"GO:0006808"},{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"positively_regulates","term_name":"nitrogen utilization","termid":"GO:0019740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitrogen utilization","synonyms":[{"name":"activation of nitrogen utilization","type":"narrow"},{"name":"stimulation of nitrogen utilization","type":"narrow"},{"name":"up regulation of nitrogen utilization","type":"exact"},{"name":"up-regulation of nitrogen utilization","type":"exact"},{"name":"upregulation of nitrogen utilization","type":"exact"}],"termid":"GO:0045848"}


id: PBO:0048915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member J","termid":"PBO:0048915"}


id: PBO:0082434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Broad specificity amino acid permease; high-affinity glutamine permease; major serine permease with minor contributions from paralog Agp1p; role in serine uptake impacts cellular sphingolipid homeostasis; also transports Leu, Thr, Cys, Met and Asn; expression is fully dependent on Grr1p and modulated by the Ssy1p-Ptr3p-Ssy5p (SPS) sensor of extracellular amino acids","termid":"PBO:0082434"}


id: PBO:0058767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6891","termid":"PBO:0058767"}


id: MONDO:0019814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Straddling or overriding tricuspid valve is a rare, congenital, tricuspid valve malformation characterized by the tricuspid valve that overrides the ventricular septum and communicates with both ventricles, as part of the tension apparatus of the valve crosses the ventricular septal defect and is attached in the left ventricle. The anomaly occurs with other congenital heart defects (transposition of great vessels, left ventricle outflow tract obstruction, double outlet right ventricle, hypoplastic right ventricle), which determine the main clinical manifestation.","definition_xrefs":["Orphanet:95461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"straddling or overriding tricuspid valve","secondary_identifiers":["GARD:19263","UMLS:C5761644","MEDGEN:1818564"],"termid":"MONDO:0019814","xrefs":{"Monarch":{"xref_id":"0019814"}}}


id: PBO:0057237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 424","termid":"PBO:0057237"}


id: GO:1901419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to alcohol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to alcohol","termid":"GO:0097305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to alcohol","termid":"GO:1901419"}


id: GO:0106393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a palmitic acid catabolic process.","definition_xrefs":["PMID:14677856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"regulates","term_name":"palmitic acid catabolic process","termid":"GO:1900534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of palmitic acid catabolic process","termid":"GO:0106393"}


id: MONDO:0018632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 11","termid":"MONDO:0016910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"11q22.2q22.3 microdeletion syndrome","secondary_identifiers":["UMLS:C5680062","MEDGEN:1805294","Orphanet:444002","GARD:21858"],"synonyms":[{"name":"11q22.2-q22.3 deletion syndrome","type":"exact"},{"name":"Del(11)(q22.2q22.3)","type":"exact"},{"name":"monosomy 11q22.2-q22.3","type":"exact"},{"name":"monosomy 11q22.2q22.3","type":"exact"}],"termid":"MONDO:0018632","xrefs":{"Monarch":{"xref_id":"0018632"}}}


id: MONDO:0016669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic hemoglobinopathy characterized by anemia, reticulocytosis and erythrocyte abnormalities including target cells, irreversibly sickled cells and crystal-containing cells. Clinical course is similar to sickle cell disease, but less severe and with less complications. Signs and symptoms may include acute episodes of pain, splenic infarction and splenic sequestration crisis, acute chest syndrome, focal segmental glomerulosclerosis, ischemic brain injury, peripheral retinopathy, and osteonecrosis.","definition_xrefs":["Orphanet:251365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"sickle cell anemia","termid":"MONDO:0011382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0006025"],"is_obsolete":false,"name":"sickle cell-hemoglobin c disease syndrome","secondary_identifiers":["GARD:6584","UMLS:C0019034","MEDGEN:5496","MedDRA:10057072"],"synonyms":[{"name":"HbSC disease","type":"exact"},{"name":"sickle cell - haemoglobin C disease","type":"related"},{"name":"sickle cell - hemoglobin C disease","type":"related"}],"termid":"MONDO:0016669","xrefs":{"Monarch":{"xref_id":"0016669"}}}


id: GO:0005127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a ciliary neurotrophic factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"ciliary neurotrophic factor receptor binding","synonyms":[{"name":"ciliary neurotrophic factor","type":"narrow"},{"name":"ciliary neurotrophic factor receptor ligand","type":"narrow"}],"termid":"GO:0005127"}


id: PR:Q10083
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.04c","synonyms":[{"name":"Spom972h-SPAC11D3.04c","type":"exact"}],"termid":"PR:Q10083"}


id: GO:2001243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic signaling pathway","termid":"GO:2001234"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway","synonyms":[{"name":"negative regulation of intrinsic apoptosis","type":"narrow"},{"name":"negative regulation of intrinsic apoptotic pathway","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signalling pathway","type":"exact"},{"name":"negative regulation of mitochondrial-mediated apoptotic pathway","type":"exact"}],"termid":"GO:2001243"}


id: GO:0045734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of acetate, the anion of acetic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"acetate catabolic process","termid":"GO:0045733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of acetate catabolic process","synonyms":[{"name":"regulation of acetate breakdown","type":"exact"},{"name":"regulation of acetate catabolism","type":"exact"},{"name":"regulation of acetate degradation","type":"exact"}],"termid":"GO:0045734"}


id: PBO:0056619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding protein 2","termid":"PBO:0056619"}


id: GO:0102160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + UDP-alpha-D-glucuronate = H+ + cyanidin 3-O-beta-(2-O-beta-D-glucuronosyl)-beta-D-glucoside + UDP.","definition_xrefs":["RHEA:28258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside 2-O-glucuronosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11756","EC:2.4.1.254"],"synonyms":[{"name":"cyanidin-3-O-glucoside 2-O-glucuronosyltransferase activity","type":"exact"}],"termid":"GO:0102160"}


id: MOD:01981
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-threonine residue by a thioether bond to form 3-methyllanthionine with unresolved stereospecificity.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"3-methyllanthionine","synonyms":[{"name":"2,6-diamino-3-methyl-4-thiaheptanedioic acid","type":"exact"},{"name":"2-amino-3-([2-amino-2-carboxyethyl]sulfanyl)butanoic acid","type":"exact"},{"name":"2-amino-3-[(2-amino-2-carboxyethyl)thio]butanoic acid","type":"exact"},{"name":"2-azanyl-3-[(2-azanyl-2-carboxyethyl)sulfanyl]butanoic acid","type":"exact"},{"name":"3-methyllanthionine","type":"exact"},{"name":"cysteine-3-L-butyrine thioether","type":"exact"}],"termid":"MOD:01981"}


id: GO:0061963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of the dormancy process that results in entry into reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["GOC:ha","PMID:27689881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"entry into reproductive diapause","termid":"GO:0055116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of entry into reproductive diapause","termid":"GO:0061963"}


id: GO:1901561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benomyl stimulus.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete response to benomyl (obsolete GO:1901561)","termid":"GO:1901561"}


id: PBO:0049976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIGD2A pseudogene 1","termid":"PBO:0049976"}


id: PBO:0059582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTA3 pseudogene 1","termid":"PBO:0059582"}


id: PBO:0002662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 3-kinase Pik3","termid":"PBO:0002662"}


id: MONDO:0016507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Surgically correctable forms of primary aldosteronism (also known as primary hyperaldosteronism) are characterized by unilateral aldosterone hypersecretion and renin suppression, associated with varying degrees of hypertension and hypokalemia.","definition_xrefs":["Orphanet:231637"],"gene_count":0,"genotype_count":0,"name":"obsolete rare surgically correctable form of primary aldosteronism (obsolete MONDO:0016507)","termid":"MONDO:0016507","xrefs":{"Monarch":{"xref_id":"0016507"}}}


id: PBO:0045059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG1 antisense RNA 1","termid":"PBO:0045059"}


id: PBO:0087337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specificity factor required for Rsp5p-dependent ubiquitination; also required for sorting of cargo proteins at the multivesicular body; identified as a high-copy suppressor of a SHR3 deletion, increasing steady-state levels of amino acid permeases","termid":"PBO:0087337"}


id: GO:0070080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a titin Z protein domain, which recognizes and binds to the C-terminal calmodulin-like domain of alpha-actinin-2 (Act-EF34), adopts a helical structure, and binds in a groove formed by the two planes between the helix pairs of Act-EF34.","definition_xrefs":["GOC:mah","InterPro:IPR015129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"titin Z domain binding","synonyms":[{"name":"Z repeat domain binding","type":"exact"}],"termid":"GO:0070080"}


id: GO:0032505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biological process in which new individuals are produced by one or two single-celled organisms. The new individuals inherit some proportion of their genetic material from the parent or parents.","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete reproduction of a single-celled organism (obsolete GO:0032505)","termid":"GO:0032505"}


id: GO:0051000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of the enzyme nitric-oxide synthase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitric-oxide synthase activity","termid":"GO:0050999"},{"relation_name":"is_a","term_name":"positive regulation of oxidoreductase activity","termid":"GO:0051353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitric-oxide synthase activity","synonyms":[{"name":"NOS activator","type":"exact"},{"name":"activation of nitric-oxide synthase activity","type":"narrow"},{"name":"nitric-oxide synthase activator","type":"exact"},{"name":"positive regulation of NOS activity","type":"exact"},{"name":"stimulation of nitric-oxide synthase activity","type":"narrow"},{"name":"up regulation of nitric-oxide synthase activity","type":"exact"},{"name":"up-regulation of nitric-oxide synthase activity","type":"exact"},{"name":"upregulation of nitric-oxide synthase activity","type":"exact"}],"termid":"GO:0051000"}


id: GO:1905263
data:
  {"annotated_genes":["SJAG_03048","SJAG_00100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102718,108727],"is_not":false,"summary":null,"term":"GO:1905263"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination.","definition_xrefs":["PMID:26653857","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic DNA double-strand break formation","termid":"GO:1903343"},{"relation_name":"is_a","term_name":"regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:1905261"},{"relation_name":"positively_regulates","term_name":"meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","termid":"GO:0010780"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0140013","GO:0006310","GO:0007049","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"narrow"},{"name":"up regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"up-regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"},{"name":"upregulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination","type":"exact"}],"termid":"GO:1905263","terms_by_termid":{"GO:1905263":null}}


id: PBO:0056417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCHF11 divergent transcript","termid":"PBO:0056417"}


id: GO:0000268
data:
  {"annotated_genes":["SJAG_03781","SJAG_00326","SJAG_00702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005052"},{"annotations":[71106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005053"},{"annotations":[90754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033328"}]},"cv_name":"molecular_function","definition":"Binding to a peroxisomal targeting sequence, a sequence of amino acids within a protein that acts as a signal for the localization of a protein into the peroxisome.","definition_xrefs":["ISBN:0879693568","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_03781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0003674","GO:0005048","GO:0005488"],"is_obsolete":false,"name":"peroxisome targeting sequence binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005051"],"synonyms":[{"name":"PTS binding","type":"exact"},{"name":"PTS receptor","type":"narrow"},{"name":"peroxisome targeting signal receptor","type":"narrow"}],"termid":"GO:0000268","terms_by_termid":{"GO:0005052":null,"GO:0005053":null,"GO:0033328":null}}


id: PBO:0074146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member C2","termid":"PBO:0074146"}


id: GO:0097553
data:
  {"annotated_genes":["SJAG_04551","SJAG_03631","SJAG_05229","SJAG_03850","SJAG_02877","SJAG_04668","SJAG_00296","SJAG_01090"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67378,74817,92729,114822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[113746,91544],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[102484],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[109035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"A process in which a calcium ion is transported from one side of a membrane to the other into the cytosol by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01090":null,"SJAG_02877":null,"SJAG_03631":null,"SJAG_03850":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"calcium ion transmembrane import into cytosol","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0060401"],"synonyms":[{"name":"calcium transmembrane import into cytosol","type":"broad"},{"name":"cytosolic calcium ion transport","type":"broad"}],"termid":"GO:0097553","terms_by_termid":{"GO:0061454":null,"GO:0098703":null,"GO:1905665":null,"GO:1905949":null}}


id: PBO:0035780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_phosphorylation_during_vegetative_growth","termid":"PBO:0035780"}


id: GO:1903629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of dUTP diphosphatase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:1315924"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of dUTP diphosphatase activity (obsolete GO:1903629)","synonyms":[{"name":"activation of dUTP diphosphatase activity","type":"narrow"},{"name":"activation of dUTP nucleotidohydrolase activity","type":"narrow"},{"name":"activation of dUTP pyrophosphatase activity","type":"narrow"},{"name":"activation of dUTPase activity","type":"narrow"},{"name":"activation of deoxyuridine-triphosphatase activity","type":"narrow"},{"name":"activation of desoxyuridine 5'-triphosphatase activity","type":"narrow"},{"name":"activation of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"narrow"},{"name":"positive regulation of dUTP nucleotidohydrolase activity","type":"exact"},{"name":"positive regulation of dUTP pyrophosphatase activity","type":"exact"},{"name":"positive regulation of dUTPase activity","type":"exact"},{"name":"positive regulation of deoxyuridine-triphosphatase activity","type":"exact"},{"name":"positive regulation of desoxyuridine 5'-triphosphatase activity","type":"exact"},{"name":"positive regulation of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"exact"},{"name":"up regulation of dUTP diphosphatase activity","type":"exact"},{"name":"up regulation of dUTP nucleotidohydrolase activity","type":"exact"},{"name":"up regulation of dUTP pyrophosphatase activity","type":"exact"},{"name":"up regulation of dUTPase activity","type":"exact"},{"name":"up regulation of deoxyuridine-triphosphatase activity","type":"exact"},{"name":"up regulation of desoxyuridine 5'-triphosphatase activity","type":"exact"},{"name":"up regulation of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"exact"},{"name":"up-regulation of dUTP diphosphatase activity","type":"exact"},{"name":"up-regulation of dUTP nucleotidohydrolase activity","type":"exact"},{"name":"up-regulation of dUTP pyrophosphatase activity","type":"exact"},{"name":"up-regulation of dUTPase activity","type":"exact"},{"name":"up-regulation of deoxyuridine-triphosphatase activity","type":"exact"},{"name":"up-regulation of desoxyuridine 5'-triphosphatase activity","type":"exact"},{"name":"up-regulation of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"exact"},{"name":"upregulation of dUTP diphosphatase activity","type":"exact"},{"name":"upregulation of dUTP nucleotidohydrolase activity","type":"exact"},{"name":"upregulation of dUTP pyrophosphatase activity","type":"exact"},{"name":"upregulation of dUTPase activity","type":"exact"},{"name":"upregulation of deoxyuridine-triphosphatase activity","type":"exact"},{"name":"upregulation of desoxyuridine 5'-triphosphatase activity","type":"exact"},{"name":"upregulation of desoxyuridine 5'-triphosphate nucleotidohydrolase activity","type":"exact"}],"termid":"GO:1903629"}


id: PBO:0004818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof12","termid":"PBO:0004818"}


id: PBO:0077322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 60","termid":"PBO:0077322"}


id: GO:0015994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin-containing compound metabolic process","termid":"GO:0006778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"chlorophyll metabolic process","synonyms":[{"name":"chlorophyll metabolism","type":"exact"}],"termid":"GO:0015994"}


id: GO:0035821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism effects a change in a biological process in another organism.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interspecies interaction between organisms","termid":"GO:0044419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of process of another organism","synonyms":[{"name":"modification of morphology or physiology of other organism","type":"exact"},{"name":"modulation of process of other organism","type":"exact"},{"name":"regulation of morphology of other organism","type":"narrow"},{"name":"regulation of morphology or physiology of other organism","type":"related"},{"name":"regulation of physiological process of other organism","type":"narrow"},{"name":"regulation of physiology of other organism","type":"narrow"}],"termid":"GO:0035821"}


id: GO:0072762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbendazim stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbendazim","termid":"GO:1901597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to carbendazim","termid":"GO:0072762"}


id: PBO:0036262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex subunit Rna14","termid":"PBO:0036262"}


id: PBO:0048874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A5 pseudogene 1","termid":"PBO:0048874"}


id: MOD:01316
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4x(13)C labeled N6-succinyl-L-lysine.","definition_xrefs":["Unimod:66#K","PubMed:11857757","PubMed:12175151","PubMed:11344537","PubMed:15189151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-succinyl-L-lysine","termid":"MOD:01819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"4x(13)C labeled N6-succinyl-L-lysine","synonyms":[{"name":"Succinic anhydride labeling reagent, heavy form (+4amu, 4C13),  K","type":"related"},{"name":"Succinyl:13C(4)","type":"related"}],"termid":"MOD:01316"}


id: PBO:0008212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr5 N-terminal domain","termid":"PBO:0008212"}


id: PBO:0056165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAD2L1 binding protein","termid":"PBO:0056165"}


id: PBO:0002959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial sulfhydryl oxidase (predicted)","termid":"PBO:0002959"}


id: MONDO:0020118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dense granule disease (obsolete MONDO:0020118)","secondary_identifiers":["icd11.foundation:1930060978","Orphanet:98456"],"synonyms":[{"name":"Delta granule disease","type":"exact"}],"termid":"MONDO:0020118","xrefs":{"Monarch":{"xref_id":"0020118"}}}


id: MONDO:0005001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the stomach that is chronic in nature.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic gastritis","secondary_identifiers":["NCIT:C26929","EFO:0000337","SCTID:8493009","ICD9:535.41","ICD9:535.4","ICD9:535.40","MEDGEN:39089","HP:0005231","UMLS:C0085695"],"synonyms":[{"name":"chronic gastritis","type":"exact"},{"name":"chronic gastritis (disease)","type":"exact"},{"name":"gastritis (disease), chronic","type":"exact"}],"termid":"MONDO:0005001","xrefs":{"Monarch":{"xref_id":"0005001"}}}


id: SO:0001190
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence consisting of nucleobases attached to a repeating unit made of threose rings connected to a phosphate backbone.","definition_xrefs":["CHEBI:48019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic_acid","termid":"SO:0000348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNA","termid":"SO:0001190"}


id: PBO:0038712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 7","termid":"PBO:0038712"}


id: MONDO:0017128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete inherited digestive tract tumor (obsolete MONDO:0017128)","secondary_identifiers":["Orphanet:271835"],"synonyms":[{"name":"genetic digestive tract tumor","type":"related"},{"name":"genetic digestive tract tumour","type":"related"}],"termid":"MONDO:0017128","xrefs":{"Monarch":{"xref_id":"0017128"}}}


id: MONDO:0004618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diplegia of upper limb","secondary_identifiers":["MEDGEN:509631","SCTID:54099005","ICD9:344.2","DOID:862","UMLS:C0154701"],"synonyms":[{"name":"diplegia of upper limbs","type":"exact"},{"name":"diplegia, upper","type":"exact"}],"termid":"MONDO:0004618","xrefs":{"Monarch":{"xref_id":"0004618"}}}


id: PBO:0085062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; regulated by phosphorylation and ubiquitination; likely involved in protein kinase C (Pkc1p)-dependent signal transduction pathway that controls cell integrity; necessary for oxidant and ramped heat stress-induced cell death; ortholog of mammalian RAC1","termid":"PBO:0085062"}


id: GO:0035803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Construction of an egg coat, a specialized extracellular matrix that surrounds the ovum of animals. The egg coat provides structural support and can play an essential role in oogenesis, fertilization and early development.","definition_xrefs":["PMID:17163408","GOC:sart","GOC:yaf","PMID:16944418","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"egg coat formation","synonyms":[{"name":"VE formation","type":"narrow"},{"name":"ZP assembly","type":"narrow"},{"name":"vitelline envelope formation","type":"narrow"},{"name":"zona pellucida assembly","type":"narrow"}],"termid":"GO:0035803"}


id: PBO:0053443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 390","termid":"PBO:0053443"}


id: PBO:0049312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSTT1 antisense RNA 1","termid":"PBO:0049312"}


id: PBO:0068728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 17, pseudogene","termid":"PBO:0068728"}


id: PBO:0004882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in cytochrome c oxidase assembly Pet191 (predicted)","termid":"PBO:0004882"}


id: MONDO:0011026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive congenital ichthyosis in which the cause of the disease is a mutation in the ABCA12 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive congenital ichthyosis","termid":"MONDO:0017265"},{"relation_name":"is_a","term_name":"lamellar ichthyosis","termid":"MONDO:0017778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"autosomal recessive congenital ichthyosis 4A","secondary_identifiers":["DOID:0060712","MESH:C537264","OMIM:601277","UMLS:C1832550","GARD:9733","MEDGEN:371355"],"synonyms":[{"name":"ARCI4A","type":"exact"},{"name":"ICR2B","type":"exact"},{"name":"LI2","type":"related"},{"name":"autosomal recessive congenital ichthyosis type 4A","type":"exact"},{"name":"ichthyosis congenita 2B","type":"related"},{"name":"ichthyosis congenita IIB","type":"exact"},{"name":"ichthyosis lamellar 2","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive 4A","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive type 4A","type":"exact"},{"name":"ichthyosis, lamellar, 2","type":"related"},{"name":"ichthyosis, lamellar, 2, formerly","type":"related"},{"name":"lamellar ichthyosis 2","type":"exact"},{"name":"lamellar ichthyosis, type 2","type":"related"}],"termid":"MONDO:0011026","xrefs":{"Monarch":{"xref_id":"0011026"}}}


id: MONDO:1010629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chediak-Higashi syndrome that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Chediak-Higashi syndrome, non-human animal","termid":"MONDO:1010070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chediak-Higashi syndrome, domestic cat","secondary_identifiers":["OMIA:000185-9685"],"termid":"MONDO:1010629","xrefs":{"Monarch":{"xref_id":"1010629"}}}


id: PBO:0044403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 115, pseudogene","termid":"PBO:0044403"}


id: MONDO:1012178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myoclonus epilepsy of Lafora, non-human animal","termid":"MONDO:1011627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus epilepsy of Lafora, dog","secondary_identifiers":["OMIA:000690-9615"],"termid":"MONDO:1012178","xrefs":{"Monarch":{"xref_id":"1012178"}}}


id: PR:Q1K9C2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sir1 gene.","definition_xrefs":["UniProtKB:Q1K9C2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfite reductase [NADPH] subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.01c","synonyms":[{"name":"Spom972h-sir1","type":"exact"}],"termid":"PR:Q1K9C2"}


id: MONDO:0001459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease involving the radial nerve. Clinical features include weakness of elbow extension, elbow flexion, supination of the forearm, wrist and finger extension, and thumb abduction. Sensation may be impaired over regions of the dorsal forearm. Common sites of compression or traumatic injury include the axilla and radial groove of the humerus.","definition_xrefs":["MESH:D020425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"radial neuropathy","secondary_identifiers":["MEDGEN:148185","UMLS:C0748226","DOID:12171","SCTID:16644004"],"synonyms":[{"name":"peripheral neuropathy of radial nerve","type":"exact"},{"name":"radial nerve peripheral neuropathy","type":"exact"}],"termid":"MONDO:0001459","xrefs":{"Monarch":{"xref_id":"0001459"}}}


id: PBO:0080536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH and IL9R antisense RNA 1","termid":"PBO:0080536"}


id: MONDO:0016768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare mucosal lichen planus (obsolete MONDO:0016768)","secondary_identifiers":["Orphanet:254373","ICD10CM:L43.1"],"synonyms":[{"name":"rare mucosal LP","type":"exact"}],"termid":"MONDO:0016768","xrefs":{"Monarch":{"xref_id":"0016768"}}}


id: RO:0002242
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A broad relationship between an exposure event or process and a process by which the exposure stressor comes into contact with the exposure receptor","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_exposure_to","termid":"RO:0002244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_exposure_route","termid":"RO:0002242"}


id: PBO:0078640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triple QxxK/R motif containing","termid":"PBO:0078640"}


id: GO:0007357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation of genes encoding transcription factors in the central region of an insect embryo by a combination of maternal regulatory signals and interactions among themselves; exemplified by the activation of expression of the Drosophila Kruppel gene by the hunchback and bicoid gene products.","definition_xrefs":["ISBN:0879694238"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of central gap gene transcription (obsolete GO:0007357)","synonyms":[{"name":"activation of central gap gene","type":"broad"},{"name":"activation of central gap gene transcription","type":"narrow"},{"name":"stimulation of central gap gene transcription","type":"narrow"},{"name":"up regulation of central gap gene transcription","type":"exact"},{"name":"up-regulation of central gap gene transcription","type":"exact"},{"name":"upregulation of central gap gene transcription","type":"exact"}],"termid":"GO:0007357"}


id: SO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding glutaminyl tRNA (SO:0000260).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic_acid_tRNA_primary_transcript","synonyms":[{"name":"glutamic acid tRNA primary transcript","type":"exact"}],"termid":"SO:0000216"}


id: MONDO:1012262
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stringhalt, non-human animal","termid":"MONDO:1011631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stringhalt, cattle","secondary_identifiers":["OMIA:000950-9913"],"termid":"MONDO:1012262","xrefs":{"Monarch":{"xref_id":"1012262"}}}


id: PBO:0039587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 5","termid":"PBO:0039587"}


id: PBO:0030575
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_isoleucine_level","termid":"PBO:0030575"}


id: MONDO:0015530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A headache disorder characterized by episodes of unilateral, short lasting pain and associated ipsilateral cranial autonomic symptoms.","definition_xrefs":["NCIT:C117074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal nerve disorder","termid":"MONDO:0003543"},{"relation_name":"is_a","term_name":"hypnic headache","termid":"MONDO:0017181"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trigeminal autonomic cephalalgia","secondary_identifiers":["SCTID:449814007","icd11.foundation:607078588","ICD9:339.09","UMLS:C1565172","MEDGEN:327950","GARD:20017","MESH:D051303","Orphanet:157843"],"termid":"MONDO:0015530","xrefs":{"Monarch":{"xref_id":"0015530"}}}


id: GO:0010360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of the anion channel activity.","definition_xrefs":["PMID:17319842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anion channel activity","termid":"GO:0010359"},{"relation_name":"is_a","term_name":"negative regulation of ion transmembrane transporter activity","termid":"GO:0032413"},{"relation_name":"is_a","term_name":"negative regulation of anion transmembrane transport","termid":"GO:1903960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of anion channel activity","termid":"GO:0010360"}


id: GO:0035747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a natural killer cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["CL:0000623","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte chemotaxis","termid":"GO:0048247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell chemotaxis","termid":"GO:0035747"}


id: SO:0001255
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polyploid where the multiple chromosome set was derived from the same organism.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"SO:0001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autopolyploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Autopolyploid"],"termid":"SO:0001255"}


id: PBO:0039796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2","termid":"PBO:0039796"}


id: PBO:0087155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA helicase in the DEAD-box family; necessary for prespliceosome formation, bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA","termid":"PBO:0087155"}


id: GO:0061971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bones are generated and organized as a result of the conversion of another structural tissue into bone.","definition_xrefs":["PMID:29852585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone morphogenesis","termid":"GO:0060349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"replacement bone morphogenesis","termid":"GO:0061971"}


id: MOD:00240
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 4-hydroxy-L-lysine.","definition_xrefs":["PubMed:4005040","RESID:AA0235","ChEBI:141495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated lysine","termid":"MOD:01047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-L-lysine","synonyms":[{"name":"(2S,4R)-2,6-diamino-4-hydroxyhexanoic acid","type":"exact"},{"name":"4-hydroxy-L-lysine","type":"exact"},{"name":"4-hydroxylated L-lysine","type":"exact"},{"name":"4HyLys","type":"exact"},{"name":"L-threo-gamma-hydroxylysine","type":"exact"},{"name":"MOD_RES 4-hydroxylysine","type":"exact"},{"name":"alpha,epsilon-diamino-gamma-hydroxycaproic acid","type":"exact"}],"termid":"MOD:00240"}


id: MONDO:0700169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutaneous T-cell lymphoma occurring in a dog.","definition_xrefs":["NCIT:C186279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine lymphoma","termid":"MONDO:0700145"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine cutaneous t-cell lymphoma","termid":"MONDO:0700169","xrefs":{"Monarch":{"xref_id":"0700169"}}}


id: MONDO:0000112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cardioencephalomyopathy, fatal infantile (obsolete MONDO:0000112)","termid":"MONDO:0000112","xrefs":{"Monarch":{"xref_id":"0000112"}}}


id: GO:0050956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive an electrical stimulus, convert it to a molecular signal, and recognize and characterize the signal. Many fish possess an electroception sense; for example, the electric eel uses low voltage pulses of electricity for navigation and prey location.","definition_xrefs":["Wikipedia:Electroreception","GOC:ai","PMID:10210663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of electrical stimulus","termid":"GO:0050952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"electroception","synonyms":[{"name":"electroception sense","type":"exact"},{"name":"electroceptive sense","type":"exact"}],"termid":"GO:0050956"}


id: PBO:0062904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-ACP synthase, mitochondrial","termid":"PBO:0062904"}


id: GO:1900946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isoprene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of olefin metabolic process","termid":"GO:1900910"},{"relation_name":"is_a","term_name":"regulation of isoprene metabolic process","termid":"GO:1900944"},{"relation_name":"positively_regulates","term_name":"isoprene metabolic process","termid":"GO:0043611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of isoprene metabolic process","synonyms":[{"name":"activation of 2-methyl-1,3-butadiene metabolic process","type":"narrow"},{"name":"activation of 2-methyl-1,3-butadiene metabolism","type":"narrow"},{"name":"activation of hemiterpene metabolic process","type":"narrow"},{"name":"activation of hemiterpene metabolism","type":"narrow"},{"name":"activation of isoprene metabolic process","type":"narrow"},{"name":"activation of isoprene metabolism","type":"narrow"},{"name":"positive regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"positive regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"positive regulation of hemiterpene metabolic process","type":"exact"},{"name":"positive regulation of hemiterpene metabolism","type":"exact"},{"name":"positive regulation of isoprene metabolism","type":"exact"},{"name":"up regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"up regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"up regulation of hemiterpene metabolic process","type":"exact"},{"name":"up regulation of hemiterpene metabolism","type":"exact"},{"name":"up regulation of isoprene metabolic process","type":"exact"},{"name":"up regulation of isoprene metabolism","type":"exact"},{"name":"up-regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"up-regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"up-regulation of hemiterpene metabolic process","type":"exact"},{"name":"up-regulation of hemiterpene metabolism","type":"exact"},{"name":"up-regulation of isoprene metabolic process","type":"exact"},{"name":"up-regulation of isoprene metabolism","type":"exact"},{"name":"upregulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"upregulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"upregulation of hemiterpene metabolic process","type":"exact"},{"name":"upregulation of hemiterpene metabolism","type":"exact"},{"name":"upregulation of isoprene metabolic process","type":"exact"},{"name":"upregulation of isoprene metabolism","type":"exact"}],"termid":"GO:1900946"}


id: GO:0007525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the somatic muscle over time, from its formation to the mature structure. Somatic muscles are striated muscle structures that connect to the exoskeleton or cuticle.","definition_xrefs":["GOC:jid","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic muscle development","termid":"GO:0007525"}


id: PBO:0059924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 10","termid":"PBO:0059924"}


id: PBO:0056613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male-enhanced antigen 1","termid":"PBO:0056613"}


id: PBO:0072439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 3","termid":"PBO:0072439"}


id: MONDO:0000212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypercalcemia disease that occurs between 28 days to one year of life.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"hypercalcemia disease","termid":"MONDO:0001566"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"hypercalcemia, infantile","secondary_identifiers":["SCTID:34225008","Orphanet:300547","MEDGEN:1380840","NCIT:C129734","GARD:17374","UMLS:C4329374","SCTID:276645004","MESH:C562999","OMIMPS:143880"],"synonyms":[{"name":"autosomal recessive hypercalcemia, infantile","type":"exact"},{"name":"autosomal recessive infantile hypercalcemia","type":"exact"},{"name":"familial infantile hypercalcemia with suppressed intact parathyroid hormone","type":"exact"},{"name":"hypercalcemia disease of infancy","type":"exact"},{"name":"hypercalcemia, idiopathic, of infancy","type":"exact"},{"name":"hypercalcemia, infantile","type":"exact"},{"name":"hypercalcemia, infantile, autosomal recessive","type":"exact"},{"name":"idiopathic infantile hypercalcemia","type":"exact"},{"name":"infantile hypercalcemia","type":"exact"},{"name":"infantile hypercalcemia disease","type":"exact"},{"name":"infantile onset hypercalcemia disease","type":"exact"}],"termid":"MONDO:0000212","xrefs":{"Monarch":{"xref_id":"0000212"}}}


id: PBO:0052021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Josephin domain containing 1","termid":"PBO:0052021"}


id: GO:0047887
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate + ATP = 2-trans,6-trans-farnesyl triphosphate + ADP.","definition_xrefs":["RHEA:21544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"farnesyl diphosphate kinase activity","secondary_identifiers":["MetaCyc:FARNESYL-DIPHOSPHATE-KINASE-RXN","EC:2.7.4.18","KEGG_REACTION:R02303"],"synonyms":[{"name":"ATP:farnesyl-diphosphate phosphotransferase activity","type":"related"},{"name":"farnesyl pyrophosphate kinase activity","type":"related"},{"name":"farnesyl-diphosphate kinase activity","type":"exact"}],"termid":"GO:0047887"}


id: FYPO:0002841
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[120005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a specific location on a chromosome is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_01050"],"name":"abolished protein localization to chromosome during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abolished protein localisation to chromosome during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromosome during mitotic cell cycle","type":"related"},{"name":"protein localization to chromosome abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0002841","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: GO:0009165
data:
  {"annotated_genes":["SJAG_01937","SJAG_04467","SJAG_04665","SJAG_00836","SJAG_02038","SJAG_03771","SJAG_06634","SJAG_02948","SJAG_03946","SJAG_MIT37","SJAG_04882","SJAG_00438","SJAG_03140","SJAG_02105","SJAG_00964","SJAG_03708","SJAG_02887","SJAG_04709","SJAG_00044","SJAG_01254","SJAG_04845","SJAG_02874","SJAG_04634","SJAG_01566","SJAG_04487","SJAG_00533","SJAG_04122","SJAG_03164","SJAG_00779","SJAG_03925","SJAG_00915","SJAG_04354","SJAG_01814","SJAG_01070","SJAG_00885","SJAG_MIT09","SJAG_01500","SJAG_04681","SJAG_05204","SJAG_01081","SJAG_01859","SJAG_01298","SJAG_00444","SJAG_01661","SJAG_04713","SJAG_02564","SJAG_04693","SJAG_00542","SJAG_05024","SJAG_04123","SJAG_02889","SJAG_02598","SJAG_03811","SJAG_04627","SJAG_01582","SJAG_03355","SJAG_02850","SJAG_MIT15","SJAG_04970","SJAG_00694","SJAG_01352","SJAG_04849","SJAG_04657","SJAG_00985","SJAG_03114","SJAG_00957","SJAG_02364","SJAG_07003","SJAG_02618","SJAG_03298","SJAG_00133","SJAG_04422","SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79163,77147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[63432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[57119,58024,70325,64592,65604,77119,72115,60172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[61265,59526,57253,62025,59192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[72400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009265"},{"annotations":[72292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[74298,57108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[80744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[68257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[64652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[68259,93300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[65408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009190"},{"annotations":[92767,95822,107618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[97336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015966"},{"annotations":[71399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[70316,79824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[71400,69032,92768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[71398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[70315,79797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[78924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006747"},{"annotations":[73054],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009398"},{"annotations":[63169,59525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[75993,101533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[64650,102577,75213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[75994,65105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[75101,77795,113471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[80267,99675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[78283,71476,80189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[118401],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[90976,89344,109986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"},{"annotations":[95181,102158,108264,104021,108172,103377,109156,93610,94198,119463,89453,103995,93183,116233,119469,119475,105366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[72781,74227,98044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006164"},{"annotations":[80746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[68258,88772,93301,92299,87785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[64651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"},{"annotations":[108640,75995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic 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biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"nucleotide anabolism","type":"exact"},{"name":"nucleotide biosynthesis","type":"exact"},{"name":"nucleotide formation","type":"exact"},{"name":"nucleotide synthesis","type":"exact"}],"termid":"GO:0009165","terms_by_termid":{"GO:0006164":null,"GO:0006172":null,"GO:0006177":null,"GO:0006183":null,"GO:0006189":null,"GO:0006225":null,"GO:0006226":null,"GO:0006227":null,"GO:0006228":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0006241":null,"GO:0006741":null,"GO:0006747":null,"GO:0009190":null,"GO:0009224":null,"GO:0009265":null,"GO:0009398":null,"GO:0009435":null,"GO:0015966":null,"GO:0019358":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0034355":null,"GO:0042776":null,"GO:0044205":null,"GO:0044206":null,"GO:0044208":null,"GO:0044209":null,"GO:0044210":null,"GO:0044211":null,"GO:0046705":null,"GO:1905707":null}}


id: PBO:0072417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 22","termid":"PBO:0072417"}


id: PBO:0074651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 40B","termid":"PBO:0074651"}


id: PBO:0066061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap guanine nucleotide exchange factor 5","termid":"PBO:0066061"}


id: GO:0032059
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell extension caused by localized decoupling of the cytoskeleton from the plasma membrane and characterized by rapid formation, rounded shape, and scarcity of organelles within the protrusion. Blebs are formed during apoptosis and other cellular processes, including cell locomotion, cell division, and as a result of physical or chemical stresses.","definition_xrefs":["Wikipedia:Bleb_(cell_biology)","GOC:mtg_apoptosis","PMID:16624291","PMID:12083798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bleb","synonyms":[{"name":"plasma membrane bleb","type":"exact"}],"termid":"GO:0032059"}


id: MONDO:0018291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with intestinal involvement (obsolete MONDO:0018291)","secondary_identifiers":["Orphanet:371188"],"synonyms":[{"name":"CDG with intestinal involvement","type":"exact"}],"termid":"MONDO:0018291","xrefs":{"Monarch":{"xref_id":"0018291"}}}


id: GO:0075026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of symbiont appressorium initiation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of appressorium initiation (obsolete GO:0075026)","synonyms":[{"name":"regulation of appressorium initiation on or near host","type":"related"},{"name":"regulation of initiation of appressorium on or near host","type":"exact"}],"termid":"GO:0075026"}


id: PBO:0042914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFLAR antisense RNA 1","termid":"PBO:0042914"}


id: MONDO:0007746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthostatic hypotensive disorder, Streeten type","secondary_identifiers":["UMLS:C1840438","MESH:C564174","OMIM:143850","MEDGEN:327101"],"synonyms":[{"name":"OHDS","type":"related"},{"name":"hyperbradykininism","type":"related"},{"name":"orthostatic hypotensive disorder","type":"related"},{"name":"orthostatic hypotensive disorder of Streeten","type":"exact"},{"name":"orthostatic hypotensive disorder, Streeten type","type":"exact"}],"termid":"MONDO:0007746","xrefs":{"Monarch":{"xref_id":"0007746"}}}


id: GO:0061373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammillary axonal complex over time, from its formation to the mature structure. The mammillary axonal complex is formed by the axons from the lateral, medial mammillary and the dorsal premammillary nuclei which share a branching pattern. Every neuron gives off one axonal stem that bifurcates into 2 branches. One of the branches is directed dorsally to the thalamus and another caudally to the midbrain.","definition_xrefs":["PMID:10662642","GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammillary body development","termid":"GO:0021767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammillary axonal complex development","termid":"GO:0061373"}


id: FYPO:0007952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is normal (i.e. indistinguishable from wild type), during stationary phase. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level","termid":"FYPO:0004083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level during stationary phase","termid":"FYPO:0007952"}


id: GO:0090639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphatidylcholine biosynthetic process that involves a one-step direct condensation of choline with CDP-diacylglycerol to form phosphatidylcholine.","definition_xrefs":["MetaCyc:PWY-6826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine biosynthetic process","termid":"GO:0006656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylcholine biosynthesis from choline and CDP-diacylglycerol","termid":"GO:0090639"}


id: PBO:0069412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 673, pseudogene","termid":"PBO:0069412"}


id: PBO:0070223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 156 pseudogene","termid":"PBO:0070223"}


id: MONDO:0015876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare vulvovaginal tumor (obsolete MONDO:0015876)","secondary_identifiers":["Orphanet:180312"],"termid":"MONDO:0015876","xrefs":{"Monarch":{"xref_id":"0015876"}}}


id: PBO:0110829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, amino acid sensing, Cha4","termid":"PBO:0110829"}


id: MONDO:1011403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperadrenocorticism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperadrenocorticism, non-human animal","secondary_identifiers":["OMIA:000494"],"termid":"MONDO:1011403","xrefs":{"Monarch":{"xref_id":"1011403"}}}


id: MONDO:1012396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reactive perforating collagenosis, non-human animal","termid":"MONDO:1011754"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reactive perforating collagenosis, domestic cat","secondary_identifiers":["OMIA:001476-9685"],"termid":"MONDO:1012396","xrefs":{"Monarch":{"xref_id":"1012396"}}}


id: GO:0052467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the salicylic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont salicylic acid-mediated defense response (obsolete GO:0052467)","synonyms":[{"name":"modulation by organism of symbiont SA-mediated defense response","type":"exact"},{"name":"modulation by organism of symbiont salicylic acid-mediated defense response","type":"exact"}],"termid":"GO:0052467"}


id: PBO:0080851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 3 pseudogene 1","termid":"PBO:0080851"}


id: GO:0090158
data:
  {"annotated_genes":["SJAG_01848","SJAG_04413","SJAG_05289","SJAG_02683","SJAG_00053","SJAG_03170","SJAG_01437","SJAG_02763","SJAG_01460","SJAG_03812","SJAG_02595","SJAG_03795"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72257,73918,74635,90733,93999,119725],"is_not":false,"summary":null,"term":"GO:0090158"},{"annotations":[78756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016320"},{"annotations":[118990,109009,115355,103798,108927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990809"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an endoplasmic reticulum membrane.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01437":null,"SJAG_01460":null,"SJAG_01848":null,"SJAG_02595":null,"SJAG_02683":null,"SJAG_02763":null,"SJAG_03170":null,"SJAG_03795":null,"SJAG_03812":null,"SJAG_04413":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"endoplasmic reticulum membrane organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:26774782":null},"synonyms":[{"name":"endoplasmic reticulum membrane organisation","type":"exact"}],"termid":"GO:0090158","terms_by_termid":{"GO:0016320":null,"GO:0090158":null,"GO:1990809":null}}


id: GO:0070413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving trehalose that occur as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["GOC:jp","GOC:mah","PMID:9797333"],"gene_count":0,"genotype_count":0,"name":"obsolete trehalose metabolism in response to stress (obsolete GO:0070413)","synonyms":[{"name":"trehalose metabolic process involved in response to stress","type":"exact"}],"termid":"GO:0070413"}


id: PR:G2TRN2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRN2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.10","synonyms":[{"name":"Spom972h-new9","type":"exact"}],"termid":"PR:G2TRN2"}


id: GO:2001232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to prospore membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization to plasma membrane","termid":"GO:1903078"},{"relation_name":"is_a","term_name":"regulation of protein localization to prospore membrane","termid":"GO:2001231"},{"relation_name":"positively_regulates","term_name":"protein localization to prospore membrane","termid":"GO:1902657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to prospore membrane","synonyms":[{"name":"positive regulation of protein localisation to prospore membrane","type":"exact"},{"name":"positive regulation of protein targeting to FSM","type":"related"},{"name":"positive regulation of protein targeting to ascospore-type prospore membrane","type":"related"},{"name":"positive regulation of protein targeting to forespore membrane","type":"related"},{"name":"positive regulation of protein targeting to prospore membrane","type":"related"},{"name":"positive regulation of protein-prospore membrane targeting","type":"related"}],"termid":"GO:2001232"}


id: GO:0009570
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid stroma","termid":"GO:0009532"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast stroma","termid":"GO:0009570"}


id: PBO:0053101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 7A","termid":"PBO:0053101"}


id: GO:0052838
data:
  {"annotated_genes":["SJAG_00827"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052837"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving thiazole, a five-membered heterocyclic ring structure containing a sulfur in the 1-position and a nitrogen in the 3-position.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"oxazole or thiazole metabolic process","termid":"GO:0046484"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"thiazole metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"thiazole metabolism","type":"exact"}],"termid":"GO:0052838","terms_by_termid":{"GO:0052837":null}}


id: PBO:0068383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 185","termid":"PBO:0068383"}


id: PBO:0044029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CS pseudogene 3","termid":"PBO:0044029"}


id: PBO:0015695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eighteen interacting centromere protein Eic2","termid":"PBO:0015695"}


id: PBO:0059143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose phosphate isomerase","termid":"PBO:0059143"}


id: PR:O94316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 116 kDa U5 small nuclear ribonucleoprotein component that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03969","PANTHER:PTHR23115:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.12","secondary_identifiers":["UniProtKB:O94316"],"synonyms":[{"name":"114 kDa U5 small nuclear ribonucleoprotein component homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EFTUD2","type":"exact"},{"name":"complexed with cdc5 protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94316"}


id: MONDO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete microcephalic primordial dwarfism (obsolete MONDO:0000139)","termid":"MONDO:0000139","xrefs":{"Monarch":{"xref_id":"0000139"}}}


id: PR:G2TRL0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC922.09 gene.","definition_xrefs":["UniProtKB:G2TRL0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C922.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC922.09","synonyms":[{"name":"Spom972h-SPAC922.09","type":"exact"}],"termid":"PR:G2TRL0"}


id: PBO:0073159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61G divergent transcript","termid":"PBO:0073159"}


id: PBO:0071989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 18","termid":"PBO:0071989"}


id: PR:Q9US20
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slc1 gene.","definition_xrefs":["UniProtKB:Q9US20","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized acyltransferase C1851.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1851.02","synonyms":[{"name":"Spom972h-slc1","type":"exact"}],"termid":"PR:Q9US20"}


id: MONDO:0018174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary glaucoma is a clinically diverse group of rare eye disorders with genetic predisposition characterized by elevated intraocular pressure (IOP) and glaucomatous changes of the optic nerve head, leading to field defects, visual loss and blindness. Hereditary glaucoma can be sub-classified as primary (congenital glaucoma, juvenile glaucoma) or secondary according to the presence or absence of systemic or other ocular anomalies (iridogoniodysgenesis, Stickler syndrome, Coats syndrome). The clinical presentation is variable and is based on age, severity of glaucoma, presence of ocular abnormalities and development of secondary IOP related abnormalities.","definition_xrefs":["Orphanet:359"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic developmental defect of the eye (obsolete MONDO:0015217)","termid":"MONDO:0015217"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hereditary glaucoma","secondary_identifiers":["MEDGEN:777991","GARD:2486","MESH:C580055","UMLS:C3711383"],"synonyms":[{"name":"glaucoma, hereditary","type":"related"},{"name":"hereditary glaucoma (disease)","type":"exact"}],"termid":"MONDO:0018174","xrefs":{"Monarch":{"xref_id":"0018174"}}}


id: MONDO:0032571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Krakow type","secondary_identifiers":["MEDGEN:1648323","UMLS:C4748455","OMIM:618162"],"synonyms":[{"name":"Immunoosseous Dysplasia, Krakow Type","type":"related"},{"name":"SEMDK","type":"related"},{"name":"SPONDYLOEPIMETAPHYSEAL DYSPLASIA, KRAKOW TYPE","type":"related"}],"termid":"MONDO:0032571","xrefs":{"Monarch":{"xref_id":"0032571"}}}


id: MONDO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that arises from the pancreas with the bulk of the tumor localized to this organ. The vast majority of cases are non-Hodgkin lymphomas of B-cell phenotype and include mucosa-associated lymphoid tissue lymphomas, follicular lymphomas, and diffuse large B-cell lymphomas.","definition_xrefs":["NCIT:C5714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrointestinal lymphoma","termid":"MONDO:0004699"},{"relation_name":"is_a","term_name":"malignant pancreatic neoplasm","termid":"MONDO:0009831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0004335"],"is_obsolete":false,"name":"pancreas lymphoma","secondary_identifiers":["MEDGEN:233304","DOID:1792","UMLS:C1335307"],"synonyms":[{"name":"lymphoma of pancreas","type":"exact"},{"name":"lymphoma of the pancreas","type":"exact"},{"name":"pancreas lymphoma","type":"exact"},{"name":"pancreatic lymphoma","type":"exact"}],"termid":"MONDO:0002114","xrefs":{"Monarch":{"xref_id":"0002114"}}}


id: GO:0050606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-carboxy-2-hydroxymuconate semialdehyde hemiacetal + NADP+ = 2-oxo-2H-pyran-4,6-dicarboxylate + H+ + NADPH.","definition_xrefs":["RHEA:29587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-carboxy-2-hydroxymuconate semialdehyde hemiacetal dehydrogenase activity","secondary_identifiers":["MetaCyc:1.2.1.45-RXN","EC:1.1.1.312","KEGG_REACTION:R04279"],"synonyms":[{"name":"2-hydroxy-4-carboxymuconate 6-semialdehyde dehydrogenase activity","type":"related"},{"name":"4-carboxy-2-hydroxy-cis,cis-muconate-6-semialdehyde:NADP(+) oxidoreductase activity","type":"related"},{"name":"4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-hydroxy-gamma-carboxymuconic epsilon-semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0050606"}


id: MONDO:1012477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disproportionate short-limbed chondrodysplasia that occurs in dogs due to a mutation in the ITGA10 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disproportionate short-limbed chondrodysplasia, non-human animal","termid":"MONDO:1011965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disproportionate short-limbed chondrodysplasia, ITGA10-related, dog","secondary_identifiers":["OMIA:001886-9615"],"termid":"MONDO:1012477","xrefs":{"Monarch":{"xref_id":"1012477"}}}


id: PBO:0074841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 34","termid":"PBO:0074841"}


id: PBO:0051635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner membrane mitochondrial protein","termid":"PBO:0051635"}


id: PBO:0088332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thioredoxin family protein, implicated in sulfur cluster assembly","termid":"PBO:0088332"}


id: GO:0006183
data:
  {"annotated_genes":["SJAG_02887","SJAG_01298","SJAG_04849"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64650,75213,102577],"is_not":false,"summary":null,"term":"GO:0006183"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate biosynthetic process","termid":"GO:0009206"},{"relation_name":"is_a","term_name":"GTP metabolic process","termid":"GO:0046039"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01298":null,"SJAG_02887":null,"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"GTP biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"GTP anabolism","type":"exact"},{"name":"GTP biosynthesis","type":"exact"},{"name":"GTP formation","type":"exact"},{"name":"GTP synthesis","type":"exact"}],"termid":"GO:0006183","terms_by_termid":{"GO:0006183":null}}


id: PBO:0017087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA(Gln) amidotransferase complex subunit Gtf1 (predicted)","termid":"PBO:0017087"}


id: GO:0001801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type IIb hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IIb hypersensitivity","termid":"GO:0001799"},{"relation_name":"is_a","term_name":"positive regulation of type II hypersensitivity","termid":"GO:0002894"},{"relation_name":"positively_regulates","term_name":"type IIb hypersensitivity","termid":"GO:0001795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type IIb hypersensitivity","synonyms":[{"name":"activation of type IIb hypersensitivity","type":"narrow"},{"name":"stimulation of type IIb hypersensitivity","type":"narrow"},{"name":"up regulation of type IIb hypersensitivity","type":"exact"},{"name":"up-regulation of type IIb hypersensitivity","type":"exact"},{"name":"upregulation of type IIb hypersensitivity","type":"exact"}],"termid":"GO:0001801"}


id: GO:0032703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-2 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-2 production","termid":"GO:0032663"},{"relation_name":"negatively_regulates","term_name":"interleukin-2 production","termid":"GO:0032623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-2 production","secondary_identifiers":["GO:0045085","GO:1900041"],"synonyms":[{"name":"down regulation of interleukin-2 production","type":"exact"},{"name":"down-regulation of interleukin-2 production","type":"exact"},{"name":"downregulation of interleukin-2 production","type":"exact"},{"name":"inhibition of interleukin-2 production","type":"narrow"},{"name":"negative regulation of IL-2 production","type":"exact"},{"name":"negative regulation of interleukin-2 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-2 secretion","type":"narrow"}],"termid":"GO:0032703"}


id: PBO:0072282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24","termid":"PBO:0072282"}


id: PBO:0030330
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phospholipid_level","termid":"PBO:0030330"}


id: FYPO:0000039
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize lysine, and therefore requires lysine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for lysine","synonyms":[{"name":"growth auxotrophic for lysine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for lysine during vegetative growth","type":"exact"},{"name":"lysine auxotrophy","type":"exact"}],"termid":"FYPO:0000039"}


id: FYECO:0000087
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which proline was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ pro","synonyms":[{"name":"proline added","type":"exact"}],"termid":"FYECO:0000087"}


id: GO:0070177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of water from a contractile vacuole to the outside of a cell by fusion of the contractile vacuole membrane with the plasma membrane.","definition_xrefs":["GOC:mah","PMID:10369671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"contractile vacuole discharge","termid":"GO:0070177"}


id: GO:0016316
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 3-phosphate + phosphate.","definition_xrefs":["RHEA:17193","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate 4-phosphatase activity","termid":"GO:0034596"},{"relation_name":"is_a","term_name":"phosphatidylinositol-3,4-bisphosphate phosphatase activity","termid":"GO:0106017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity","secondary_identifiers":["GO:0004440","MetaCyc:3.1.3.66-RXN","EC:3.1.3.66","Reactome:R-HSA-1676164","Reactome:R-HSA-1676162"],"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol-3,4-bisphosphate 4-phosphohydrolase activity","type":"related"},{"name":"inositol polyphosphate 4-phosphatase type II activity","type":"related"}],"termid":"GO:0016316"}


id: PBO:0053761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1003","termid":"PBO:0053761"}


id: PBO:0088746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex WD repeat subunit Hip2","termid":"PBO:0088746"}


id: MOD:00475
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 2-amino-L-tyrosine.","definition_xrefs":["Unimod:342#Y","PubMed:8839040","PubMed:9252331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"aminated residue","termid":"MOD:02039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-amino-L-tyrosine","synonyms":[{"name":"Amino","type":"related"},{"name":"Tyrosine oxidation to 2-aminotyrosine","type":"related"}],"termid":"MOD:00475"}


id: MONDO:0000593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoimmune disease of skin and connective tissue (obsolete MONDO:0000593)","termid":"MONDO:0000593","xrefs":{"Monarch":{"xref_id":"0000593"}}}


id: GO:0031361
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the thylakoid membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of thylakoid membrane (obsolete GO:0031361)","synonyms":[{"name":"integral to thylakoid membrane","type":"narrow"}],"termid":"GO:0031361"}


id: GO:1900124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nodal receptor complex assembly.","definition_xrefs":["GOC:TermGenie","PMID:15062104","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of nodal receptor complex assembly","termid":"GO:1900123"},{"relation_name":"negatively_regulates","term_name":"nodal receptor complex assembly","termid":"GO:0038099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"negative regulation of nodal receptor complex assembly","synonyms":[{"name":"down regulation of ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"down regulation of nodal receptor complex assembly","type":"exact"},{"name":"down regulation of nodal receptor complex formation","type":"exact"},{"name":"down-regulation of ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"down-regulation of nodal receptor complex assembly","type":"exact"},{"name":"down-regulation of nodal receptor complex formation","type":"exact"},{"name":"downregulation of ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"downregulation of nodal receptor complex assembly","type":"exact"},{"name":"downregulation of nodal receptor complex formation","type":"exact"},{"name":"inhibition of ActRIIB.ALK4.EGF-CFC complex formation","type":"narrow"},{"name":"inhibition of nodal receptor complex assembly","type":"narrow"},{"name":"inhibition of nodal receptor complex formation","type":"narrow"},{"name":"negative regulation of ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"negative regulation of nodal receptor complex formation","type":"exact"}],"termid":"GO:1900124"}


id: GO:0016335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a larval imaginal disc epithelium are generated and organized.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"instar larval development","termid":"GO:0002168"},{"relation_name":"part_of","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"morphogenesis of larval imaginal disc epithelium","termid":"GO:0016335"}


id: GO:0031323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways by which individual cells transform chemical substances.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular metabolic process (obsolete GO:0031323)","synonyms":[{"name":"regulation of cellular metabolism","type":"exact"}],"termid":"GO:0031323"}


id: PBO:0052903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 11-1","termid":"PBO:0052903"}


id: PBO:0050337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 39","termid":"PBO:0050337"}


id: GO:0016057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Hyperpolarization (vertebrates) or depolarization (invertebrates) of the photoreceptor cell membrane via closing/opening of cation specific channels as a result of signals generated by rhodopsin activation by a photon.","definition_xrefs":["GOC:hb","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane potential in photoreceptor cell","synonyms":[{"name":"changes in polarization state of photoreceptor cell membrane","type":"exact"}],"termid":"GO:0016057"}


id: MONDO:0002193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that affects the Bartholin gland. Representative examples include adenoma, adenomyoma, adenocarcinoma, and squamous cell carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibular gland benign neoplasm","termid":"MONDO:0000626"},{"relation_name":"is_a","term_name":"integumentary system benign neoplasm","termid":"MONDO:0000652"},{"relation_name":"is_a","term_name":"Bartholin gland neoplasm","termid":"MONDO:0021114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bartholin gland benign neoplasm","secondary_identifiers":["DOID:2068","MEDGEN:83868","NCIT:C6434","UMLS:C0347500","SCTID:189130001"],"synonyms":[{"name":"Bartholin gland neoplasm","type":"broad"},{"name":"major vestibular gland benign neoplasm","type":"exact"},{"name":"tumor of Bartholin's gland","type":"broad"},{"name":"tumour of Bartholin's gland","type":"broad"}],"termid":"MONDO:0002193","xrefs":{"Monarch":{"xref_id":"0002193"}}}


id: MONDO:0043179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piepkorn karp hickok syndrome","secondary_identifiers":["MEDGEN:418962","UMLS:C2931016","MESH:C535774"],"synonyms":[{"name":"short ribs, polysyndactyly, cranial synostosis, cleft palate cardiovascular and urogenital anomalies and severe ossification defect","type":"related"}],"termid":"MONDO:0043179","xrefs":{"Monarch":{"xref_id":"0043179"}}}


id: PBO:0071935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 12","termid":"PBO:0071935"}


id: PBO:0051762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 7 pseudogene 1","termid":"PBO:0051762"}


id: GO:1902694
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of superoxide dismutase copper chaperone activity.","definition_xrefs":["GO_REF:0000088","GOC:bhm","GOC:TermGenie","PMID:10426947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallochaperone complex","termid":"GO:1902695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"superoxide dismutase copper chaperone complex","termid":"GO:1902694"}


id: PBO:0056804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD2 lysolipid transporter A, lysophospholipid","termid":"PBO:0056804"}


id: GO:0051359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of the fluorescent protein FP611 chromophore cross-link from the alpha-carboxyl carbon of residue n, a methionine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons. This modification is found in the GFP-like fluorescent chromoprotein from the sea anemone Entacmaea quadricolor.","definition_xrefs":["PMID:15542608","PDB:1XQM","RESID:AA0379","PDB:1UIS","PMID:10852900","PMID:12185250","PMID:12909624"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-imino-methionine 5-imidazolinone glycine (obsolete GO:0051359)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 2-imino-methionine 5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 2-imino-methionine 5-imidazolinone glycine","type":"exact"}],"termid":"GO:0051359"}


id: PBO:0063299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma constant","termid":"PBO:0063299"}


id: GO:0010575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases or activates the frequency, rate, or extent of production of vascular endothelial growth factor.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of vascular endothelial growth factor production","termid":"GO:0010574"},{"relation_name":"positively_regulates","term_name":"vascular endothelial growth factor production","termid":"GO:0010573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular endothelial growth factor production","termid":"GO:0010575"}


id: PBO:0051949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPKB antisense RNA 1","termid":"PBO:0051949"}


id: PBO:0054294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1685","termid":"PBO:0054294"}


id: PR:O13970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 30S ribosomal protein S2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01278","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein mrp4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.10c","secondary_identifiers":["UniProtKB:O13970"],"synonyms":[{"name":"Spom972h-rpsB","type":"exact"}],"termid":"PR:O13970"}


id: PBO:0042079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 146","termid":"PBO:0042079"}


id: PBO:0071020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 22","termid":"PBO:0071020"}


id: GO:0009768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"After a photon of light is absorbed by one of the many chlorophyll molecules, in one of the light-harvesting complexes of an antenna on photosystem I, some of the absorbed energy is transferred to the pair of chlorophyll molecules in the reaction center.","definition_xrefs":["ISBN:0716731363","GOC:jid","ISBN:0816017360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthesis, light harvesting","termid":"GO:0009765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"photosynthesis, light harvesting in photosystem I","termid":"GO:0009768"}


id: GO:0051252
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of RNA metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000024":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"regulation of RNA 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id: GO:0106225
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The 2-hydroxyisobutyrylation of a lysine residue in a protein.","definition_xrefs":["PMID:29775581","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine 2-hydroxyisobutyrylation (obsolete GO:0106225)","termid":"GO:0106225"}


id: PBO:0083301
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps 5' end of essential HAS1/YMR290C gene which encodes an ATP-dependent RNA helicase","termid":"PBO:0083301"}


id: PBO:0024823
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ath1 complex protein Ath2 nuclease, XP-G family (predicted)","termid":"PBO:0024823"}


id: PBO:0080755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-C motif chemokine receptor 1","termid":"PBO:0080755"}


id: PR:Q9C0V1
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- amt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0V1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPB1C11.01","synonyms":[{"name":"Spom972h-amt1","type":"exact"}],"termid":"PR:Q9C0V1"}


id: PBO:0001035
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human 4F5S homolog","termid":"PBO:0001035"}


id: PBO:0058616
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6748","termid":"PBO:0058616"}


id: GO:0031880
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 3 somatostatin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatostatin receptor binding","termid":"GO:0031877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"type 3 somatostatin receptor binding","synonyms":[{"name":"type 3 somatostatin receptor ligand","type":"narrow"}],"termid":"GO:0031880"}


id: GO:0016812
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  {"annotated_genes":["SJAG_01995","SJAG_00444","SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017168"},{"annotations":[71991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004151"},{"annotations":[63705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033971"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amide.","definition_xrefs":["EC:3.5.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00444":null,"SJAG_01995":null,"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70906"],"termid":"GO:0016812","terms_by_termid":{"GO:0004151":null,"GO:0017168":null,"GO:0033971":null}}


id: GO:0044280
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Electron dense material observed coating the cytoplasmic face of the plasma membrane in certain regions of a neuron, e.g., the axon initial segment; the nodal membrane at the Node of Ranvier.","definition_xrefs":["NIF_Subcellular:sao1938587839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extrinsic component of cytoplasmic side of plasma membrane","termid":"GO:0031234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"subplasmalemmal coating","termid":"GO:0044280"}


id: PBO:0076021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 17a","termid":"PBO:0076021"}


id: PBO:0089373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc10","termid":"PBO:0089373"}


id: PR:000028947
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin reduced form in Schizosaccharomyces pombe. The reduced Cys are Cys-30 and Cys-33 in UniProtKB:O14463.","definition_xrefs":["PMID:22245228","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trx1/Red+","pombase_gene_id":"SPAC7D4.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: thioredoxin-1 reduced form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-TXN/Red+","type":"exact"},{"name":"trx1/Red+","type":"exact"}],"termid":"PR:000028947"}


id: GO:0046428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-dihydroxy-2-naphthoate + an all-trans-polyprenyl diphosphate + H+ = a 2-demethylmenaquinol + CO2 + diphosphate.","definition_xrefs":["RHEA:26478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"1,4-dihydroxy-2-naphthoate polyprenyltransferase activity","secondary_identifiers":["EC:2.5.1.74","MetaCyc:RXN-11047"],"synonyms":[{"name":"1,4-dihydroxy-2-naphtoate prenyltransferase activity","type":"exact"}],"termid":"GO:0046428"}


id: PBO:0075171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 1","termid":"PBO:0075171"}


id: GO:0006794
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary phosphorus source and then activates genes to scavenge the last traces of the primary phosphorus source and to transport and metabolize alternative phosphorus sources. The utilization process begins when the cell or organism detects phosphorus levels, includes the phosphorus-containing substances, and ends when phosphorus is incorporated into the cell or organism's metabolism.","definition_xrefs":["GOC:mah","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphorus utilization","termid":"GO:0006794"}


id: GO:0036023
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, in which the anatomical structures of a skeletal limb joint are generated and organized. A skeletal limb joint is the connecting structure between the bones of a limb.","definition_xrefs":["GOC:bf","Wikipedia:Joint"],"direct_ancestors":[{"relation_name":"is_a","term_name":"limb joint morphogenesis","termid":"GO:0036022"},{"relation_name":"is_a","term_name":"embryonic skeletal joint morphogenesis","termid":"GO:0060272"},{"relation_name":"part_of","term_name":"embryonic limb morphogenesis","termid":"GO:0030326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic skeletal limb joint morphogenesis","termid":"GO:0036023"}


id: GO:0034413
data:
  {"annotated_genes":["SJAG_04666","SJAG_04771","SJAG_03587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94797],"is_not":false,"summary":null,"term":"GO:0034413"},{"annotations":[87839,92750],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of ascospores.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ascospore wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0034409"},{"relation_name":"is_a","term_name":"ascospore wall beta-glucan biosynthetic process","termid":"GO:0034412"},{"relation_name":"is_a","term_name":"fungal-type cell wall (1->3)-beta-D-glucan biosynthetic process","termid":"GO:0071970"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03587":null,"SJAG_04666":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044085","GO:0007049","GO:0030437","GO:0071554"],"is_obsolete":false,"name":"ascospore wall (1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore wall 1,3-beta-D-glucan biosynthetic process","type":"broad"},{"name":"ascospore wall 1,3-beta-glucan anabolism","type":"exact"},{"name":"ascospore wall 1,3-beta-glucan biosynthesis","type":"exact"},{"name":"ascospore wall 1,3-beta-glucan biosynthetic process","type":"broad"},{"name":"ascospore wall 1,3-beta-glucan formation","type":"exact"},{"name":"ascospore wall 1,3-beta-glucan synthesis","type":"exact"},{"name":"ascospore wall beta-1,3-glucan anabolism","type":"exact"},{"name":"ascospore wall beta-1,3-glucan biosynthesis","type":"exact"},{"name":"ascospore wall beta-1,3-glucan biosynthetic process","type":"exact"},{"name":"ascospore wall beta-1,3-glucan formation","type":"exact"},{"name":"ascospore wall beta-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0034413","terms_by_termid":{"GO:0034413":null,"GO:0140748":null}}


id: MOD:01210
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to the copper(1+) glutamate salt.","definition_xrefs":["Unimod:531#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper(1+) L-glutamate","synonyms":[{"name":"Cation:Cu[I]","type":"related"},{"name":"Replacement of proton by copper","type":"related"},{"name":"cuprous salt","type":"exact"}],"termid":"MOD:01210"}


id: MONDO:1011597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe combined immunodeficiency disease that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency disease, non-human animal","termid":"MONDO:1011422"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe combined immunodeficiency disease, horse","secondary_identifiers":["OMIA:000220-9796"],"termid":"MONDO:1011597","xrefs":{"Monarch":{"xref_id":"1011597"}}}


id: PBO:0082974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic serine/threonine protein kinase; identified as a high-copy suppressor of the synthetic lethality of a sis2 sit4 double mutant, suggesting a role in G1/S phase progression; VHS1 has a paralog, SKS1, that arose from the whole genome duplication","termid":"PBO:0082974"}


id: SO:0001727
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H3 histone protein is mono-methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K9_methylation_site","termid":"SO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K9_monomethylation_site","synonyms":[{"name":"H3K9 mono-methylation site","type":"exact"},{"name":"H3K9Me1","type":"related"}],"termid":"SO:0001727"}


id: GO:0052680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (+)-epi-isozizaene + diphosphate.","definition_xrefs":["RHEA:25992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"epi-isozizaene synthase activity","secondary_identifiers":["EC:4.2.3.37","MetaCyc:RXN-9349","KEGG_REACTION:R07830"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate diphosphate-lyase [(+)-epi-isozizaene-forming] activity","type":"exact"}],"termid":"GO:0052680"}


id: FYPO:0004098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation stops before completing separation of chromosomes, and most of the DNA remains in a single mass at or near the midpoint of the mitotic spindle, but portions of the chromosomes can separate along the spindle, resulting in the formation of a DNA mass shaped like the Greek letter phi.","definition_xrefs":["PMID:7957061","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete mitotic sister chromatid segregation","termid":"FYPO:0003757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000337","FYPO:0001320","FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"incomplete mitotic sister chromatid segregation, with phi-shaped DNA mass","synonyms":[{"name":"incomplete mitotic sister chromatid segregation, with phi-shaped DNA mass, during vegetative growth","type":"exact"},{"name":"incomplete mitotic sister chromatid separation, with phi-shaped DNA mass","type":"related"},{"name":"incomplete sister chromatid segregation, with phi-shaped DNA mass during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004098"}


id: PBO:0030255
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription_during_vegetative_growth","termid":"PBO:0030255"}


id: MONDO:0009439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive condition caused by mutation(s) in the ALOX12B gene, encoding arachidonate 12-lipoxygenase, 12R-type. It is characterized by dry, thickened, scaly skin.","definition_xrefs":["NCIT:C132827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"self-healing collodion baby","termid":"MONDO:0017267"},{"relation_name":"is_a","term_name":"congenital non-bullous ichthyosiform erythroderma","termid":"MONDO:0019306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive congenital ichthyosis 2","secondary_identifiers":["MEDGEN:854762","UMLS:C3888093","OMIM:242100","GARD:15187","DOID:0060710"],"synonyms":[{"name":"ARCI2","type":"exact"},{"name":"Brocq congenital ichthyosiform erythroderma nonbullous form","type":"exact"},{"name":"NBCIE","type":"related"},{"name":"NCIE","type":"related"},{"name":"NCIE1","type":"exact"},{"name":"autosomal recessive congenital ichthyosis type 2","type":"exact"},{"name":"collodion baby, self-healing","type":"related"},{"name":"ichthyosiform erythroderma, Brocq congenital, nonbullous form","type":"related"},{"name":"ichthyosiform erythroderma, Brocq congenital, nonbullous form, formerly","type":"related"},{"name":"ichthyosiform erythroderma, congenital, nonbullous, 1","type":"related"},{"name":"ichthyosiform erythroderma, nonbullous congenital, 1","type":"related"},{"name":"ichthyosiform erythroderma, nonbullous congenital, 1, formerly","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive 2","type":"related"},{"name":"ichthyosis, congenital, autosomal recessive type 2","type":"exact"},{"name":"nonbullous congenital ichthyosiform erythroderma 1","type":"exact"}],"termid":"MONDO:0009439","xrefs":{"Monarch":{"xref_id":"0009439"}}}


id: PBO:0044793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 6","termid":"PBO:0044793"}


id: MONDO:0008345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete idiopathic pulmonary fibrosis (obsolete MONDO:0008345)","secondary_identifiers":["NANDO:1200417"],"termid":"MONDO:0008345","xrefs":{"Monarch":{"xref_id":"0008345"}}}


id: SO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A frameshift variant that causes the translational reading frame to be shortened relative to the reference feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frameshift_variant","termid":"SO:0001589"},{"relation_name":"is_a","term_name":"feature_truncation","termid":"SO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_truncation","synonyms":[{"name":"ANNOVAR:frameshift deletion","type":"exact"},{"name":"Jannovar:frameshift_truncation","type":"exact"},{"name":"frameshift truncation","type":"exact"}],"termid":"SO:0001910"}


id: PBO:0045316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxynucleotidyltransferase terminal interacting protein 1","termid":"PBO:0045316"}


id: GO:1990734
data:
  {"annotated_genes":["SJAG_03835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109975],"is_not":false,"summary":null,"term":"GO:1990734"}]},"cv_name":"biological_process","definition":"Any process in which an astral microtubule is maintained in a specific location in a cell by attachment to a mitotic spindle pole body. Microtubules attach to spindle pole bodies at the minus end.","definition_xrefs":["PMID:15004232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule anchoring at spindle pole body","termid":"GO:0034631"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"astral microtubule anchoring at mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990734","terms_by_termid":{"GO:1990734":null}}


id: GO:1903893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the ATF6-mediated unfolded protein response.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:PARL","PMID:22013210","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900103"},{"relation_name":"is_a","term_name":"regulation of ATF6-mediated unfolded protein response","termid":"GO:1903891"},{"relation_name":"positively_regulates","term_name":"ATF6-mediated unfolded protein response","termid":"GO:0036500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ATF6-mediated unfolded protein response","synonyms":[{"name":"activation of ATF6 branch of UPR","type":"narrow"},{"name":"activation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"activation of ATF6-alpha UPR branch","type":"narrow"},{"name":"activation of ATF6-beta UPR branch","type":"narrow"},{"name":"activation of ATF6-mediated unfolded protein response","type":"narrow"},{"name":"activation of UPR signaling by ATF6 stress sensor","type":"narrow"},{"name":"activation of activating transcription factor 6 signaling in unfolded protein response","type":"narrow"},{"name":"activation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"narrow"},{"name":"positive regulation of ATF6 branch of UPR","type":"exact"},{"name":"positive regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"positive regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"positive regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"positive regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"positive regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"positive regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"up regulation of ATF6 branch of UPR","type":"exact"},{"name":"up regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"up regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"up regulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"up regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"up regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"up regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"up-regulation of ATF6 branch of UPR","type":"exact"},{"name":"up-regulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up-regulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"up-regulation of ATF6-beta UPR branch","type":"narrow"},{"name":"up-regulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"up-regulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"up-regulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"up-regulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"},{"name":"upregulation of ATF6 branch of UPR","type":"exact"},{"name":"upregulation of ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"upregulation of ATF6-alpha UPR branch","type":"narrow"},{"name":"upregulation of ATF6-beta UPR branch","type":"narrow"},{"name":"upregulation of ATF6-mediated unfolded protein response","type":"exact"},{"name":"upregulation of UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"upregulation of activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"upregulation of endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"}],"termid":"GO:1903893"}


id: PBO:0062282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily J member 2","termid":"PBO:0062282"}


id: PBO:0077605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 11G, pseudogene","termid":"PBO:0077605"}


id: GO:1903504
data:
  {"annotated_genes":["SJAG_02451","SJAG_03353","SJAG_01297","SJAG_01679","SJAG_00883","SJAG_02169","SJAG_02336","SJAG_03681","SJAG_01837","SJAG_03126","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91048,116288,114654,99923,104234,107593,108620,112339,114165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[94529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[117065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic spindle checkpoint.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23442800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of spindle checkpoint","termid":"GO:0090231"},{"relation_name":"regulates","term_name":"mitotic spindle checkpoint signaling","termid":"GO:0071174"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic spindle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitotic cell cycle spindle checkpoint","type":"exact"}],"termid":"GO:1903504","terms_by_termid":{"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: GO:0019938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of isopeptide bonds by ligation of peptidyl-lysine and peptidyl-asparagine residues; occurs in mammals in proteins as yet unidentified by a mechanism probably analogous to that of transglutaminase reactions.","definition_xrefs":["RESID:AA0294"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via N6-(L-isoaspartyl)-L-lysine, presumed catalytic (obsolete GO:0019938)","termid":"GO:0019938"}


id: PBO:0064286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing S1","termid":"PBO:0064286"}


id: PBO:0045711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAZ interacting zinc finger protein 1 like","termid":"PBO:0045711"}


id: GO:0050001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-glutamine = NH3 + D-glutamate.","definition_xrefs":["EC:3.5.1.35","MetaCyc:D-GLUTAMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-glutaminase activity","secondary_identifiers":["RHEA:22840"],"synonyms":[{"name":"D-glutamine amidohydrolase activity","type":"related"}],"termid":"GO:0050001"}


id: GO:0019605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any butyrate, the anions of butyric acid (butanoic acid), a saturated, unbranched aliphatic acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"butyrate metabolic process","secondary_identifiers":["GO:0043437"],"synonyms":[{"name":"butanoic acid metabolic process","type":"exact"},{"name":"butanoic acid metabolism","type":"exact"},{"name":"butyrate metabolism","type":"exact"},{"name":"butyric acid metabolic process","type":"exact"},{"name":"butyric acid metabolism","type":"exact"}],"termid":"GO:0019605"}


id: PBO:0089074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomevalonate kinase Erg8","termid":"PBO:0089074"}


id: PR:Q9UTF7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B2.03c gene.","definition_xrefs":["UniProtKB:Q9UTF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation of fatty acids protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.03c","synonyms":[{"name":"3-keto acyl-CoA synthase SPAC1B2.03c (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC1B2.03c","type":"exact"},{"name":"very-long-chain 3-oxoacyl-CoA synthase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTF7"}


id: GO:0051988
data:
  {"annotated_genes":["SJAG_05290","SJAG_03048","SJAG_03126","SJAG_00082","SJAG_01837","SJAG_04140","SJAG_01805","SJAG_04280"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[105536,116397,112340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[94135,111578,102722,117068,90324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[117071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904967"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the attachment of spindle microtubules to the kinetochore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of attachment of spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of kinetochore-microtubule attachment","type":"exact"}],"termid":"GO:0051988","terms_by_termid":{"GO:0140429":null,"GO:1902424":null,"GO:1902425":null,"GO:1904967":null}}


id: PBO:0017968
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YER025W","termid":"PBO:0017968"}


id: MONDO:0008882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Long bone bowing is a congenital condition described by the presence of symmetric or asymmetric angular deformity and shortening of the long bones, particularly the femurs, tibiae and ulnae.","definition_xrefs":["Orphanet:2292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital deformities of limbs","termid":"MONDO:0017427"},{"relation_name":"is_a","term_name":"bent bone dysplasia","termid":"MONDO:0019698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital bowing of long bones","secondary_identifiers":["SCTID:716098006","MEDGEN:395251","OMIM:211355","UMLS:C1859394","MedDRA:10054064","GARD:953","icd11.foundation:1261565213"],"synonyms":[{"name":"bowing of long bones congenital","type":"related"},{"name":"bowing of long bones, asymmetric and symmetric","type":"related"}],"termid":"MONDO:0008882","xrefs":{"Monarch":{"xref_id":"0008882"}}}


id: GO:0046034
data:
  {"annotated_genes":["SJAG_02369","SJAG_00438","SJAG_02796","SJAG_00027","SJAG_00461","SJAG_MIT15","SJAG_00136","SJAG_00133","SJAG_00685","SJAG_00605","SJAG_02107","SJAG_02009","SJAG_02945","SJAG_03373","SJAG_05314","SJAG_00915","SJAG_01471","SJAG_02135","SJAG_02564","SJAG_MIT09","SJAG_MIT37","SJAG_00542","SJAG_02598","SJAG_03114","SJAG_03925","SJAG_00836","SJAG_05204","SJAG_02785","SJAG_02038","SJAG_03660","SJAG_04048","SJAG_07003","SJAG_04334","SJAG_03903","SJAG_04422","SJAG_04495","SJAG_06621","SJAG_04122","SJAG_00839","SJAG_00985","SJAG_06622","SJAG_04192","SJAG_01310","SJAG_03828","SJAG_02105"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59507,67770,67851],"is_not":false,"summary":null,"term":"GO:0046034"},{"annotations":[98324,109763,105811,116738,78197,109764,105812,94858,98595,103726,106182,95352,105810,103983,109760,109761,106181,109759,109762,109765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[73415,76373],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[118401],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[109156,105366,89453,108172,102158,104021,119475,119469,116233,119463,108264,95181,93183,103377,94198,93610,103995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[70459],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate metabolic process","termid":"GO:0009205"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00438":null,"SJAG_00461":null,"SJAG_00542":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00836":null,"SJAG_00839":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01310":null,"SJAG_01471":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03114":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03925":null,"SJAG_04048":null,"SJAG_04122":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04422":null,"SJAG_04495":null,"SJAG_05204":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"ATP metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"ATP metabolism","type":"exact"}],"termid":"GO:0046034","terms_by_termid":{"GO:0006110":null,"GO:0042776":null,"GO:0045820":null,"GO:0046034":null,"GO:0061613":null,"GO:0061621":null,"GO:1905707":null}}


id: GO:0004053
data:
  {"annotated_genes":["SJAG_03398"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70875],"is_not":false,"summary":null,"term":"GO:0004053"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + H2O = L-ornithine + urea.","definition_xrefs":["EC:3.5.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"arginase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-452036","MetaCyc:ARGINASE-RXN","Reactome:R-HSA-70569","RHEA:20569"],"synonyms":[{"name":"L-arginase activity","type":"related"},{"name":"L-arginine amidinohydrolase activity","type":"related"},{"name":"arginine amidinase activity","type":"related"},{"name":"arginine transamidinase activity","type":"related"},{"name":"canavanase activity","type":"related"}],"termid":"GO:0004053","terms_by_termid":{"GO:0004053":null}}


id: PR:Q9P6P9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pkp1 gene.","definition_xrefs":["UniProtKB:Q9P6P9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"[Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.11c","synonyms":[{"name":"Spom972h-pkp1","type":"exact"},{"name":"pyruvate dehydrogenase kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P9"}


id: PBO:0005185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger splicing factor Bpb1","termid":"PBO:0005185"}


id: PR:Q9HDT9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB2B2.18 gene.","definition_xrefs":["UniProtKB:Q9HDT9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0768 protein PB2B2.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.18","synonyms":[{"name":"Spom972h-SPBPB2B2.18","type":"exact"}],"termid":"PR:Q9HDT9"}


id: PBO:0076167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1A member 3","termid":"PBO:0076167"}


id: GO:0008192
data:
  {"annotated_genes":["SJAG_01724","SJAG_04233"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004484"},{"annotations":[73670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008193"}]},"cv_name":"molecular_function","definition":"Catalysis of the posttranscriptional addition of a guanyl residue to the 5' end of an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01724":null,"SJAG_04233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016779","GO:0140098","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"RNA guanylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0008192","terms_by_termid":{"GO:0004484":null,"GO:0008193":null}}


id: GO:0034390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a smooth muscle cell. Smooth muscle consists of non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels.","definition_xrefs":["GOC:mah","GOC:mtg_apoptosis","GOC:rl","GOC:BHF","CL:0000192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell apoptotic process","termid":"GO:0010657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle cell apoptotic process","synonyms":[{"name":"SMC apoptosis","type":"exact"},{"name":"apoptosis of smooth muscle cells","type":"exact"},{"name":"programmed cell death of smooth muscle cells by apoptosis","type":"exact"},{"name":"programmed cell death, smooth muscle cells","type":"exact"},{"name":"smooth muscle cell apoptosis","type":"narrow"},{"name":"smooth muscle cell programmed cell death by apoptosis","type":"exact"}],"termid":"GO:0034390"}


id: PBO:0083793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein of the mitochondrial intermembrane space; forms a complex with Tim10p (TIM10 complex) that delivers hydrophobic proteins to the TIM22 complex for insertion into the inner membrane","termid":"PBO:0083793"}


id: GO:0030140
data:
  {"annotated_genes":["SJAG_00379","SJAG_04609","SJAG_00669","SJAG_04517","SJAG_00916","SJAG_04565","SJAG_02282","SJAG_01809","SJAG_02240"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100528],"is_not":false,"summary":null,"term":"GO:0030140"},{"annotations":[113378,62264,113167,78104],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[58832,65694],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[72311,77639],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034044"}]},"cv_name":"cellular_component","definition":"A vesicle that mediates transport between the trans-Golgi network and other parts of the cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi-associated vesicle","termid":"GO:0005798"},{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"clathrin-coated vesicle","termid":"GO:0030136"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00379":null,"SJAG_00669":null,"SJAG_00916":null,"SJAG_01809":null,"SJAG_02240":null,"SJAG_02282":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"trans-Golgi network transport vesicle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"TGN transport vesicle","type":"exact"},{"name":"trans-Golgi network constitutive secretory pathway transport vesicle","type":"exact"}],"termid":"GO:0030140","terms_by_termid":{"GO:0030121":null,"GO:0030130":null,"GO:0030140":null,"GO:0034044":null}}


id: MONDO:0016443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired form of collagenoma that appears in childhood. It is characterized by discrete, firm, skin-colored, and slightly elevated cutaneous papules, nodules or plaques that may be generalized, or found on the trunk and the extremities.","definition_xrefs":["NCIT:C4707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"papular elastorrhexis","secondary_identifiers":["MEDGEN:1813032","Orphanet:228264","UMLS:C5680907","GARD:20583","SCTID:239138008","icd11.foundation:1231672259"],"synonyms":[{"name":"Nevus anelasticus","type":"exact"},{"name":"disseminated nevus anelasticus","type":"exact"},{"name":"eruptive collagenoma","type":"exact"}],"termid":"MONDO:0016443","xrefs":{"Monarch":{"xref_id":"0016443"}}}


id: MONDO:1012915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis that occurs in Rhesus monkey due to a mutation in the TARDBP gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iatrogenic disease, non-human animal","termid":"MONDO:1011322"},{"relation_name":"is_a","term_name":"amyotrophic lateral sclerosis, non-human animal","termid":"MONDO:1012954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotrophic lateral sclerosis, TARDBP-related, Rhesus monkey","secondary_identifiers":["OMIA:002492-9544"],"termid":"MONDO:1012915","xrefs":{"Monarch":{"xref_id":"1012915"}}}


id: PBO:0039502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain containing 26","termid":"PBO:0039502"}


id: GO:0009175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine ribonucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate catabolic process","termid":"GO:0009131"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate catabolic process","termid":"GO:0009158"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate metabolic process","termid":"GO:0009173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleoside monophosphate catabolic process","synonyms":[{"name":"pyrimidine ribonucleoside monophosphate breakdown","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate catabolism","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009175"}


id: PBO:0045000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dicer 1, ribonuclease III","termid":"PBO:0045000"}


id: MONDO:0012089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis prematurity syndrome is a rare, syndromic congenital ichthyosis characterized by premature birth (at gestational weeks 30-32, in general) in addition to thick, caseous and desquamating epidermis, neonatal respiratory asphyxia, and persistent eosinophilia. After the perinatal period, a spontaneous improvement in the health of affected patients is observed and skin features (vernix caseosa-like scale) evolve into a mild presentation of flat follicular hyperkeratosis with atopy.","definition_xrefs":["Orphanet:88621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"pneumonitis","termid":"MONDO:0043905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis prematurity syndrome","secondary_identifiers":["NCIT:C62590","GARD:9886","MEDGEN:324839","SCTID:12381000132107","MESH:C536271","UMLS:C1837610","OMIM:608649"],"synonyms":[{"name":"IPS","type":"exact"},{"name":"congenital ichthyosis type 4","type":"exact"},{"name":"ichthyosis congenita 4","type":"related"},{"name":"ichthyosis congenita IV","type":"related"},{"name":"ichthyosis prematurity syndrome","type":"exact"},{"name":"ichthyosis-prematurity syndrome","type":"related"},{"name":"idiopathic pneumonia syndrome","type":"exact"}],"termid":"MONDO:0012089","xrefs":{"Monarch":{"xref_id":"0012089"}}}


id: GO:0043170
data:
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