# terms

id: PBO:0070343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 16","termid":"PBO:0070343"}


id: PBO:0116650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 2 binding protein pseudogene 5","termid":"PBO:0116650"}


id: MONDO:0012785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited hypertrophic pyloric stenosis","termid":"MONDO:0100239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pyloric stenosis, infantile hypertrophic, 3","secondary_identifiers":["MEDGEN:383144","OMIM:612017","MESH:C567435","UMLS:C2677588"],"synonyms":[{"name":"IHPS3","type":"exact"},{"name":"pyloric stenosis, infantile hypertrophic, 3","type":"exact"}],"termid":"MONDO:0012785","xrefs":{"Monarch":{"xref_id":"0012785"}}}


id: PBO:0056542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF2L antisense RNA 1","termid":"PBO:0056542"}


id: PR:P40235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A casein kinase I isoform epsilon that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03027","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I homolog hhp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.15","secondary_identifiers":["UniProtKB:P40235"],"synonyms":[{"name":"Spom972h-CSNK1E","type":"exact"}],"termid":"PR:P40235"}


id: PBO:0082265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminophospholipid translocase (flippase); type 4 P-type ATPase; involved in phospholipid translocation, contributing to endocytosis, protein transport, and cellular polarization; localizes primarily to the plasma membrane; localizes to the shmoo tip where it has a redundant role in the cellular response to mating pheromone; DNF1 has a paralog, DNF2, that arose from the whole genome duplication","termid":"PBO:0082265"}


id: MONDO:0000095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete split-hand/foot malformation (obsolete MONDO:0000095)","termid":"MONDO:0000095","xrefs":{"Monarch":{"xref_id":"0000095"}}}


id: GO:0042450
data:
  {"annotated_genes":["SJAG_00695","SJAG_01592","SJAG_00392","SJAG_01019","SJAG_01461","SJAG_00635","SJAG_00412","SJAG_04577","SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70610,78812,98489,102964,106883,110838,111456,112286,118788],"is_not":false,"summary":null,"term":"GO:0042450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arginine (2-amino-5-guanidinopentanoic acid) via the intermediate compound ornithine.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-arginine biosynthetic process","termid":"GO:0006526"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-arginine biosynthetic process via ornithine","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"arginine anabolism via ornithine","type":"exact"},{"name":"arginine biosynthesis, acetylated pathway","type":"exact"},{"name":"arginine formation via ornithine","type":"exact"},{"name":"arginine synthesis via ornithine","type":"exact"},{"name":"classical arginine biosynthesis pathway","type":"exact"}],"termid":"GO:0042450","terms_by_termid":{"GO:0042450":null}}


id: PBO:0062514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily J member 3","termid":"PBO:0062514"}


id: GO:0100061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription factor catabolic process process that negatively regulates SREBP signaling pathway.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SREBP signaling pathway by transcription factor catabolic process (obsolete GO:0100061)","termid":"GO:0100061"}


id: PBO:0055132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2551","termid":"PBO:0055132"}


id: PBO:0062047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 34","termid":"PBO:0062047"}


id: MONDO:0005501
data:
  {"annotated_genes":["SJAG_03865","SJAG_01960","SJAG_00578","SJAG_04363","SJAG_03552","SJAG_01071","SJAG_04697","SJAG_01940","SJAG_02211","SJAG_00041","SJAG_03054","SJAG_01459","SJAG_04096","SJAG_03158"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012637"},{"annotations":[86522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013281"},{"annotations":[87363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013325"},{"annotations":[86787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013810"},{"annotations":[87268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012635"},{"annotations":[86693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957540"},{"annotations":[86573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957820"},{"annotations":[87217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054559"},{"annotations":[85891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859356"},{"annotations":[85890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859357"},{"annotations":[85949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009953"},{"annotations":[86917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011629"},{"annotations":[87253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010478"},{"annotations":[86486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013870"}]},"cv_name":"mondo","definition":"A congenital disorder of glycosylation that involves malfunctioning trimming/processing of the protein-bound oligosaccharide chain.","definition_xrefs":["DOID:0050571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00578":null,"SJAG_01071":null,"SJAG_01459":null,"SJAG_01940":null,"SJAG_01960":null,"SJAG_02211":null,"SJAG_03054":null,"SJAG_03158":null,"SJAG_03552":null,"SJAG_03865":null,"SJAG_04096":null,"SJAG_04363":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"congenital disorder of glycosylation type II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0005546","MESH:C535747","OMIMPS:212066","UMLS:C5574948","MEDGEN:1812737"],"synonyms":[{"name":"B4GALT1-CDG","type":"related"},{"name":"B4GALT1-CDG (CDG-2d)","type":"related"},{"name":"MGAT2-CDG","type":"related"},{"name":"MGAT2-CDG (CDG-2a)","type":"related"},{"name":"MOGS-CDG","type":"related"},{"name":"MOGS-CDG (CDG-2b)","type":"related"},{"name":"congenital disorder of glycosylation type II","type":"exact"},{"name":"congenital disorders of glycosylation, type II","type":"exact"}],"termid":"MONDO:0005501","terms_by_termid":{"MONDO:0009953":null,"MONDO:0010478":null,"MONDO:0011629":null,"MONDO:0012635":null,"MONDO:0012637":null,"MONDO:0013281":null,"MONDO:0013325":null,"MONDO:0013810":null,"MONDO:0013870":null,"MONDO:0054559":null,"MONDO:0859356":null,"MONDO:0859357":null,"MONDO:0957540":null,"MONDO:0957820":null},"xrefs":{"Monarch":{"xref_id":"0005501"}}}


id: PBO:0111645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone/ATP-dependent chromatin remodeller, SMARCAD1 family Fft3","termid":"PBO:0111645"}


id: MONDO:0034106
data:
  {"annotated_genes":["SJAG_01507"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86447],"is_not":false,"summary":null,"term":"MONDO:0034106"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01507":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 73","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112209","OMIM:618379","Orphanet:544503","UMLS:C5193065","MEDGEN:1681654","GARD:17988"],"synonyms":[{"name":"DEE73","type":"exact"},{"name":"developmental and epileptic encephalopathy 73","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 73","type":"exact"},{"name":"rnf13-related severe early-onset epileptic encephalopathy","type":"exact"}],"termid":"MONDO:0034106","terms_by_termid":{"MONDO:0034106":null},"xrefs":{"Monarch":{"xref_id":"0034106"}}}


id: GO:0098573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of mitochondrial membrane (obsolete GO:0098573)","synonyms":[{"name":"intrinsic to mitochondrial membrane","type":"narrow"}],"termid":"GO:0098573"}


id: GO:0071285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lithium (Li+) ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lithium ion","termid":"GO:0010226"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lithium ion","termid":"GO:0071285"}


id: GO:0099111
data:
  {"annotated_genes":["SJAG_00918","SJAG_00332","SJAG_01613","SJAG_02431","SJAG_02731","SJAG_00368","SJAG_02561","SJAG_02651","SJAG_00851","SJAG_05319","SJAG_01775","SJAG_04001","SJAG_03673","SJAG_00594","SJAG_01224","SJAG_05220","SJAG_01662","SJAG_02509","SJAG_01863","SJAG_02286","SJAG_04143","SJAG_03437","SJAG_05266","SJAG_01370","SJAG_03835","SJAG_02336","SJAG_03073","SJAG_04387","SJAG_02737","SJAG_00397","SJAG_00113","SJAG_04003","SJAG_01211","SJAG_04597","SJAG_03540","SJAG_00140","SJAG_05185","SJAG_02045","SJAG_01297","SJAG_02761","SJAG_01546","SJAG_01371"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92173,91712,95543,103308,91321,117334,97909,103599,111428,114330,111779,101066,88076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[111602,106954,101775],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[101786,114332,75474,117338,109980,71057,107793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"},{"annotations":[99566,97984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[88080,91714,76696,99567,97911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[94746],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[104090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099117"},{"annotations":[119068,108633,104244,100725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"},{"annotations":[89466,90072,100862,97104,110263,117305,109255,114482,91309,98956,107869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"},{"annotations":[91477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010970"},{"annotations":[104894,105228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"A microtubule-based process that results in the transport of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.","definition_xrefs":["GOC:cjm","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02651":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04143":null,"SJAG_04387":null,"SJAG_04597":null,"SJAG_05185":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"microtubule-based transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0099111","terms_by_termid":{"GO:0000743":null,"GO:0010970":null,"GO:0030989":null,"GO:0032118":null,"GO:0047496":null,"GO:0090561":null,"GO:0098863":null,"GO:0099117":null,"GO:0140210":null,"GO:1902854":null,"GO:1990976":null}}


id: FYPO:0005575
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell requires magnesium ions in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for magnesium","synonyms":[{"name":"growth auxotrophic for magnesium during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for magnesium during vegetative growth","type":"exact"},{"name":"growth auxotrophic for magnesium ion","type":"exact"},{"name":"magnesium auxotrophy","type":"exact"}],"termid":"FYPO:0005575"}


id: PBO:0059381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 6","termid":"PBO:0059381"}


id: PR:O43065
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TATA-binding protein-associated factor 172 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03351","PANTHER:PTHR10799:SF225","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase mot1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1826.01c","secondary_identifiers":["UniProtKB:O43065"],"synonyms":[{"name":"Spom972h-BTAF1","type":"exact"},{"name":"TBP-associated factor mot1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"modifier of transcription 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43065"}


id: PBO:0043539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 7","termid":"PBO:0043539"}


id: PBO:0108910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAFF interacting protein","termid":"PBO:0108910"}


id: PBO:0076119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin binding protein 3","termid":"PBO:0076119"}


id: PBO:0109190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA splicing or mRNA surveillance facor","termid":"PBO:0109190"}


id: PBO:0040794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta globin locus transcript 3","termid":"PBO:0040794"}


id: FYPO:0006518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering G0 phase.","definition_xrefs":["PMID:29167439","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability upon nitrogen starvation","termid":"FYPO:0001178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability in G0","synonyms":[{"name":"loss of viability in cell quiescence","type":"exact"},{"name":"loss of viability in quiescence","type":"exact"}],"termid":"FYPO:0006518"}


id: MONDO:1040026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that has spread to the brain from another anatomic site.","definition_xrefs":["PMID:29262201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain cancer","termid":"MONDO:0001657"},{"relation_name":"is_a","term_name":"metastatic malignant neoplasm","termid":"MONDO:0024880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"metastatic malignant neoplasm in the brain","secondary_identifiers":["MEDGEN:113095","UMLS:C0220650"],"termid":"MONDO:1040026","xrefs":{"Monarch":{"xref_id":"1040026"}}}


id: PR:O94530
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sua5 gene.","definition_xrefs":["UniProtKB:O94530","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonylcarbamoyl-AMP synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC895.03c","synonyms":[{"name":"L-threonylcarbamoyladenylate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sua5","type":"exact"},{"name":"TC-AMP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"t(6)A37 threonylcarbamoyladenosine biosynthesis protein sua5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA threonylcarbamoyladenosine biosynthesis protein sua5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94530"}


id: GO:0051700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fructosyl-amino acid + O2 = corresponding amino acid + glucosone + H2O2.","definition_xrefs":["PMID:16233628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fructosyl-amino acid oxidase activity","synonyms":[{"name":"FAOD activity","type":"exact"}],"termid":"GO:0051700"}


id: PBO:0080640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 87B, pseudogene","termid":"PBO:0080640"}


id: PBO:0042314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD28 molecule","termid":"PBO:0042314"}


id: GO:1904223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glucuronosyltransferase activity.","definition_xrefs":["GOC:BHF","GOC:rl","PMID:20610558","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glucuronosyltransferase activity (obsolete GO:1904223)","synonyms":[{"name":"regulation of 1-naphthol glucuronyltransferase activity","type":"narrow"},{"name":"regulation of 1-naphthol-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 17-OH steroid UDPGT activity","type":"narrow"},{"name":"regulation of 17-beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 17beta-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 3-OH androgenic UDPGT activity","type":"narrow"},{"name":"regulation of 3-alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 3alpha-hydroxysteroid UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 4-hydroxybiphenyl UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 4-methylumbelliferone UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of 4-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"regulation of 4-nitrophenol UDPGT activity","type":"narrow"},{"name":"regulation of GT activity","type":"exact"},{"name":"regulation of PNP-UDPGT","type":"related"},{"name":"regulation of UDP glucuronate-estradiol-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of UDP glucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of UDP glucuronic acid transferase activity","type":"exact"},{"name":"regulation of UDP glucuronosyltransferase activity","type":"exact"},{"name":"regulation of UDP glucuronyltransferase activity","type":"exact"},{"name":"regulation of UDP-glucuronate beta-D-glucuronosyltransferase (acceptor-unspecific)","type":"exact"},{"name":"regulation of UDP-glucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of UDP-glucuronate-bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"regulation of UDP-glucuronosyltransferase activity","type":"exact"},{"name":"regulation of UDP-glucuronyltransferase activity","type":"exact"},{"name":"regulation of UDPGA transferase activity","type":"exact"},{"name":"regulation of UDPGA-glucuronyltransferase activity","type":"exact"},{"name":"regulation of UDPGT activity","type":"exact"},{"name":"regulation of UDPglucuronate beta-D-glucuronosyltransferase (acceptor-unspecific) activity","type":"narrow"},{"name":"regulation of bilirubin UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of bilirubin UDPGT activity","type":"narrow"},{"name":"regulation of bilirubin glucuronyltransferase activity","type":"narrow"},{"name":"regulation of bilirubin monoglucuronide glucuronyltransferase activity","type":"narrow"},{"name":"regulation of bilirubin uridine diphosphoglucuronyltransferase activity","type":"narrow"},{"name":"regulation of ciramadol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"regulation of estriol UDPglucuronosyltransferase activity","type":"narrow"},{"name":"regulation of estrone UDPglucuronosyltransferase activity","type":"narrow"},{"name":"regulation of morphine glucuronyltransferase activity","type":"narrow"},{"name":"regulation of p-hydroxybiphenyl UDP glucuronyltransferase activity","type":"narrow"},{"name":"regulation of p-nitrophenol UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of p-nitrophenol UDP-glucuronyltransferase activity","type":"narrow"},{"name":"regulation of p-nitrophenylglucuronosyltransferase activity","type":"narrow"},{"name":"regulation of p-phenylphenol glucuronyltransferase activity","type":"narrow"},{"name":"regulation of phenyl-UDP-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of pnp-UDPGT activity","type":"narrow"},{"name":"regulation of uridine 5'-diphosphoglucuronyltransferase activity","type":"exact"},{"name":"regulation of uridine diphosphate glucuronyltransferase activity","type":"exact"},{"name":"regulation of uridine diphosphoglucuronate-1,2-diacylglycerol glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-4-hydroxybiphenyl glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-bilirubin glucuronoside glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-bilirubin glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-estradiol glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-estriol 16-alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-estriol 16alpha-glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronate-estriol glucuronosyltransferase activity","type":"narrow"},{"name":"regulation of uridine diphosphoglucuronosyltransferase activity","type":"exact"},{"name":"regulation of uridine diphosphoglucuronyltransferase activity","type":"exact"}],"termid":"GO:1904223"}


id: PBO:0063517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal dependent decarboxylase domain containing 2, pseudogene","termid":"PBO:0063517"}


id: GO:0062107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to a non-growing cell tip.","definition_xrefs":["PMID:18328707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell tip","termid":"GO:1903066"},{"relation_name":"regulates","term_name":"protein localization to non-growing cell tip","termid":"GO:1902487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to non-growing cell tip","termid":"GO:0062107"}


id: MONDO:0011508
data:
  {"annotated_genes":["SJAG_02460","SJAG_00980"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86512,86513],"is_not":false,"summary":null,"term":"MONDO:0011508"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-Hodgkin lymphoma","termid":"MONDO:0018908"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_02460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"lymphoma, non-Hodgkin, familial","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:605027","UMLS:C4721532","SCTID:118601006","ICD9:202.80","MEDGEN:1648388"],"synonyms":[{"name":"lymphoma, follicular, somatic","type":"exact"},{"name":"lymphoma, non-Hodgkin","type":"exact"},{"name":"lymphoma, non-Hodgkin, familial","type":"exact"},{"name":"lymphoma, non-Hodgkin, somatic","type":"exact"},{"name":"non-Hodgkin lymphoma","type":"related"}],"termid":"MONDO:0011508","terms_by_termid":{"MONDO:0011508":null},"xrefs":{"Monarch":{"xref_id":"0011508"}}}


id: FYPO:0006340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which endocytosis occurs only at the old end of the cell during interphase of the mitotic cell cycle. Normally, endocytosis takes place at the old cell end throughout interphase, and also at the new end after NETO.","definition_xrefs":["PomBase:mah","PMID:16141239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"endocytosis restricted to old cell end","synonyms":[{"name":"endocytosis abolished at new cell end","type":"exact"},{"name":"endocytosis restricted to old cell end during interphase of mitotic cell cycle","type":"exact"},{"name":"endocytosis restricted to old cell end during mitotic interphase","type":"exact"},{"name":"endocytosis restricted to old cell end during vegetative growth","type":"exact"},{"name":"endocytosis restricted to old cell tip","type":"exact"}],"termid":"FYPO:0006340"}


id: PBO:0061725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACHT and WD repeat domain containing 1","termid":"PBO:0061725"}


id: MONDO:0043370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hormonal disorder that occurs when lack of corticotropin-releasing hormone (CRH) secretion from the hypothalamus or adrenocorticotropic hormone (ACTH) secretion from the pituitary is responsible for hypofunction of the adrenal cortex.","definition_xrefs":["NCIT:C62602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenocortical insufficiency","termid":"MONDO:0000004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary adrenal insufficiency","secondary_identifiers":["UMLS:C0948387","MEDGEN:184925","SCTID:16685009"],"synonyms":[{"name":"central Hypoadrenalism","type":"exact"},{"name":"central adrenal insufficiency","type":"exact"},{"name":"hypocortisolism secondary to another disorder","type":"exact"},{"name":"secondary adrenal insufficiency","type":"exact"},{"name":"secondary adrenocortical insufficiency","type":"related"},{"name":"secondary hypocortisolism","type":"related"}],"termid":"MONDO:0043370","xrefs":{"Monarch":{"xref_id":"0043370"}}}


id: GO:0005395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + eye pigment precursor(in) = ADP + phosphate + eye pigment precursor(out).","definition_xrefs":["TC:3.A.1.204.1"],"gene_count":0,"genotype_count":0,"name":"obsolete eye pigment precursor transporter activity (obsolete GO:0005395)","termid":"GO:0005395"}


id: PBO:0061151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMNAT1 pseudogene 3","termid":"PBO:0061151"}


id: GO:1900549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N',N'',N'''-triacetylfusarinine C.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"N',N'',N'''-triacetylfusarinine C metabolic process","synonyms":[{"name":"N',N'',N'''-triacetylfusarinine C metabolism","type":"exact"}],"termid":"GO:1900549"}


id: MONDO:0019338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sarcoidosis is a multisystemic disorder of unknown cause characterized by the formation of immune granulomas in involved organs.","definition_xrefs":["Orphanet:797"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type IV hypersensitivity disease","termid":"MONDO:0002459"},{"relation_name":"excluded_subClassOf","term_name":"autoimmune disease","termid":"MONDO:0007179"},{"relation_name":"excluded_subClassOf","term_name":"obsolete inflammatory and autoimmune disease with epilepsy (obsolete MONDO:0015657)","termid":"MONDO:0015657"},{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic inflammatory disease associated with an acquired peripheral neuropathy (obsolete MONDO:0016177)","termid":"MONDO:0016177"},{"relation_name":"excluded_subClassOf","term_name":"non-familial restrictive cardiomyopathy","termid":"MONDO:0016345"},{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic diseases with anterior uveitis (obsolete MONDO:0017259)","termid":"MONDO:0017259"},{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic diseases with posterior uveitis (obsolete MONDO:0017260)","termid":"MONDO:0017260"},{"relation_name":"excluded_subClassOf","term_name":"obsolete systemic diseases with panuveitis (obsolete MONDO:0017261)","termid":"MONDO:0017261"},{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"excluded_subClassOf","term_name":"obsolete pituitary hormone deficiency secondary to a granulomatous disease (obsolete MONDO:0019843)","termid":"MONDO:0019843"},{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoidosis","secondary_identifiers":["UMLS:C0036202","icd11.foundation:330792642","ICD9:135","GARD:7607","DOID:11335","MedDRA:10039486","MEDGEN:48554","NANDO:1200415","NCIT:C34995","NORD:1690","SCTID:31541009","MESH:D012507"],"synonyms":[{"name":"Besnier-Boeck-Schaumann disease","type":"exact"},{"name":"Boeck sarcoid","type":"exact"},{"name":"Boeck's sarcoid","type":"exact"},{"name":"Boeck's sarcoidosis","type":"exact"},{"name":"Darier-Roussy sarcoid","type":"exact"},{"name":"benign lymphogranulomatosis of Schaumann","type":"related"},{"name":"besnier-Boeck-Schaumann syndrome","type":"exact"},{"name":"lupus pernio of Besnier","type":"related"},{"name":"lymphogranulomatosis","type":"exact"},{"name":"miliary lupoid of boeck","type":"related"},{"name":"sarcoid","type":"exact"},{"name":"sarcoidosis","type":"exact"}],"termid":"MONDO:0019338","xrefs":{"Monarch":{"xref_id":"0019338"}}}


id: RO:0002623
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"visited_by","termid":"RO:0002619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_flowers_visited_by","termid":"RO:0002623"}


id: PBO:0088469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex bromodomain subunit Rsc4","termid":"PBO:0088469"}


id: PBO:0062149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 28 pseudogene","termid":"PBO:0062149"}


id: SO:0000560
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one D-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_J_cluster","synonyms":[{"name":"D J cluster","type":"exact"},{"name":"D-J-CLUSTER","type":"exact"}],"termid":"SO:0000560"}


id: PBO:0000963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Cysteine","termid":"PBO:0000963"}


id: PBO:0057399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548h-1","termid":"PBO:0057399"}


id: PBO:0000048
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"date","termid":"PBO:0000048"}


id: MONDO:0020125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of neuromuscular junction disease that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"gene_count":0,"genotype_count":0,"name":"obsolete acquired neuromuscular junction disease (obsolete MONDO:0020125)","secondary_identifiers":["Orphanet:98494"],"synonyms":[{"name":"acquired neuromuscular junction disease","type":"exact"}],"termid":"MONDO:0020125","xrefs":{"Monarch":{"xref_id":"0020125"}}}


id: GO:0046154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving rhodopsin, a brilliant purplish-red, light-sensitive visual pigment found in the rod cells of the retinas.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"},{"relation_name":"is_a","term_name":"eye pigment metabolic process","termid":"GO:0042441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhodopsin metabolic process","synonyms":[{"name":"rhodopsin metabolism","type":"exact"}],"termid":"GO:0046154"}


id: FYPO:0008316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial ribosome complex assembly is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitochondrial translation initiation complex assembly","termid":"FYPO:0008316"}


id: PBO:0067797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 99","termid":"PBO:0067797"}


id: PBO:0063710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5","termid":"PBO:0063710"}


id: PBO:0091062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid/polyamine transporter","termid":"PBO:0091062"}


id: FYPO:0005993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translation in the cytoplasm is normal (i.e. indistinguishable from wild type). Translation is the synthesis of a protein using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain.","definition_xrefs":["GO:0002181","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation phenotype","termid":"FYPO:0000291"},{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cytoplasmic translation","synonyms":[{"name":"normal cytoplasmic protein biosynthesis","type":"exact"},{"name":"normal cytoplasmic protein synthesis","type":"exact"},{"name":"normal cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"normal cytoplasmic translation during vegetative growth","type":"exact"}],"termid":"FYPO:0005993"}


id: GO:0102066
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = diphosphoric acid + alpha-patchoulene.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-patchoulene synthase activityy (obsolete GO:0102066)","termid":"GO:0102066"}


id: PBO:0079350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tweety family member 3","termid":"PBO:0079350"}


id: PBO:0089512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial omega-amidase","termid":"PBO:0089512"}


id: GO:0102816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + delphinidin 3-O-glucosyl-5-O-caffeoylglucoside = H+ + delphinidin 3-O-glucosyl-5-O-(caffeoylglucoside-3'-O-glucoside) + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"UDP-D-glucose:delphinidin 3-O-glucosyl-5-O-caffeoylglucoside -O-beta-D-glucosyltransferase activity","secondary_identifiers":["RHEA:35423","MetaCyc:RXN-8234"],"termid":"GO:0102816"}


id: GO:0042353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fucose (6-deoxygalactose).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose metabolic process","termid":"GO:0006004"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"fucose biosynthetic process","synonyms":[{"name":"fucose anabolism","type":"exact"},{"name":"fucose biosynthesis","type":"exact"},{"name":"fucose formation","type":"exact"},{"name":"fucose synthesis","type":"exact"}],"termid":"GO:0042353"}


id: GO:0141111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of of cGAS/STING signaling pathway.","definition_xrefs":["PMID:37802025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"cGAS/STING signaling pathway","termid":"GO:0140896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of cGAS/STING signaling pathway","termid":"GO:0141111"}


id: GO:0003075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The renal process that modulates the force with which blood travels through the circulatory system, by vasodilation of the peripheral vascular system.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal control of peripheral vascular resistance involved in regulation of systemic arterial blood pressure","termid":"GO:0003072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal vasodilation of the peripheral vascular system involved in regulation of systemic arterial blood pressure","synonyms":[{"name":"renal regulation of systemic arterial blood pressure by vasodilation of the peripheral vascular system","type":"exact"}],"termid":"GO:0003075"}


id: PATO:0002364
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's length being notably lower than its width.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shortened","termid":"PATO:0002364"}


id: PBO:0004489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-adrenodoxin reductase Arh1","termid":"PBO:0004489"}


id: MONDO:0004827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neoplasm arising from the distal third of the esophagus. Morphologically, it is characterized by the presence of fibrovascular cores covered by mature stratified squamous epithelium. Progression to squamous cell carcinoma is extremely rare.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous papilloma","termid":"MONDO:0001825"},{"relation_name":"is_a","term_name":"benign neoplasm of esophagus","termid":"MONDO:0021459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophagus squamous cell papilloma","secondary_identifiers":["MEDGEN:272592","NCIT:C5344","DOID:959","UMLS:C1333467"],"synonyms":[{"name":"esophageal squamous papilloma","type":"exact"},{"name":"esophagus squamous cell papilloma","type":"exact"},{"name":"esophagus squamous papilloma","type":"exact"},{"name":"oesophagus squamous papilloma","type":"exact"},{"name":"squamous cell papilloma of esophagus","type":"exact"},{"name":"squamous cell papilloma of oesophagus","type":"exact"},{"name":"squamous cell papilloma of the esophagus","type":"exact"},{"name":"squamous cell papilloma of the oesophagus","type":"exact"}],"termid":"MONDO:0004827","xrefs":{"Monarch":{"xref_id":"0004827"}}}


id: PATO:0001358
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having a knob or knoblike protuberance.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"umbonate","termid":"PATO:0001358"}


id: PBO:0108934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLEKHB2 pseudogene 1","termid":"PBO:0108934"}


id: PBO:0029740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spherical_cell_during_nitrogen_starvation","termid":"PBO:0029740"}


id: PBO:0074879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 59A","termid":"PBO:0074879"}


id: GO:0018565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-dihydroxydibenzothiophene + O2 = cis-4-(2-(3-hydroxy)-thionaphthenyl)-2-oxo-3-butenoate.","definition_xrefs":["UM-BBD_reactionID:r0162"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydroxydibenzothiophene dioxygenase activity (obsolete GO:0018565)","termid":"GO:0018565"}


id: MONDO:0011027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 diabetes mellitus","termid":"MONDO:0005148"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0005015"],"is_obsolete":false,"name":"diabetes mellitus, noninsulin-dependent, 1","secondary_identifiers":["OMIM:601283","MESH:C563359","MEDGEN:321979","UMLS:C1832544"],"synonyms":[{"name":"NIDDM1","type":"related"},{"name":"diabetes mellitus, noninsulin-dependent 1","type":"exact"},{"name":"diabetes mellitus, noninsulin-dependent, 1","type":"exact"},{"name":"diabetes mellitus, noninsulin-dependent, type 1","type":"exact"},{"name":"noninsulin-dependent diabetes mellitus 1","type":"related"}],"termid":"MONDO:0011027","xrefs":{"Monarch":{"xref_id":"0011027"}}}


id: GO:2001156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proline catabolic process to glutamate.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine catabolic process","termid":"GO:0033241"},{"relation_name":"is_a","term_name":"regulation of glutamate metabolic process","termid":"GO:2000211"},{"relation_name":"is_a","term_name":"regulation of proline metabolic process","termid":"GO:2000214"},{"relation_name":"regulates","term_name":"proline catabolic process to glutamate","termid":"GO:0010133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"regulation of proline catabolic process to glutamate","synonyms":[{"name":"regulation of proline breakdown to glutamate","type":"exact"},{"name":"regulation of proline degradation to glutamate","type":"exact"},{"name":"regulation of proline oxidation","type":"related"}],"termid":"GO:2001156"}


id: PBO:0049940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHLA3 antisense RNA 1","termid":"PBO:0049940"}


id: GO:0051499
data:
  {"annotated_genes":["SJAG_01248"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051500"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-aminoacyl-tRNA + H2O = a D-alpha-amino acid + a tRNA + H+.  Removal of a D-amino acid from a charged tRNA.","definition_xrefs":["PMID:14527667","RHEA:13953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA deacylase activity","termid":"GO:0002161"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"},{"relation_name":"is_a","term_name":"deacylase activity","termid":"GO:0160215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"D-aminoacyl-tRNA deacylase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.1.1.96","MetaCyc:RXN-15041"],"termid":"GO:0051499","terms_by_termid":{"GO:0051500":null}}


id: PBO:0028079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_phenotype","termid":"PBO:0028079"}


id: PBO:0043258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 16","termid":"PBO:0043258"}


id: PBO:0029636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_stubby_vegetative_cell","termid":"PBO:0029636"}


id: MONDO:0021088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade III meningioma characterized by the predominance of a perivascular pseudopapillary pattern.","definition_xrefs":["NCIT:C3904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary meningioma","secondary_identifiers":["MEDGEN:463642","ICDO:9538/3","ONCOTREE:PPM","UMLS:C3163622"],"synonyms":[{"name":"papillary meningioma","type":"exact"}],"termid":"MONDO:0021088","xrefs":{"Monarch":{"xref_id":"0021088"}}}


id: MONDO:0002777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pleural empyema (obsolete MONDO:0002777)","termid":"MONDO:0002777","xrefs":{"Monarch":{"xref_id":"0002777"}}}


id: FYPO:0005901
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin filament-based movement is increased. Actin filament-based movement is the movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.","definition_xrefs":["PomBase:mah","PMID:19570908","GO:0030048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament-based movement","termid":"FYPO:0005900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of actin filament-based movement","synonyms":[{"name":"increased rate of actin filament-based movement during mitotic cell cycle","type":"related"},{"name":"increased rate of actin filament-based movement during vegetative growth","type":"exact"}],"termid":"FYPO:0005901"}


id: PBO:0056861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIB E3 ubiquitin protein ligase 1","termid":"PBO:0056861"}


id: PBO:0082907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine aminopeptidase with homocysteine-thiolactonase activity; protects cells against homocysteine toxicity; cytosolic protein, selectively transported to vacuole during nitrogen starvation; has bleomycin hydrolase activity in vitro; transcription is regulated by galactose via Gal4p; orthologous to human BLMH","termid":"PBO:0082907"}


id: _global:directly_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p directly regulates q iff p is immediately causally upstream of q and p regulates q.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"immediately_causally_upstream_of","termid":"_global:immediately_causally_upstream_of"},{"relation_name":"is_a","term_name":"regulates","termid":"_global:regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_regulates","secondary_identifiers":["RO:0002578"],"termid":"_global:directly_regulates"}


id: GO:0036200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: androsta-1,4-diene-3,17-dione + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = 9alpha-hydroxyandrosta-1,4-diene-3,17-dione + H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["EC:1.14.15.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-ketosteroid 9-alpha-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R09860","RHEA:32199"],"synonyms":[{"name":"3-ketosteroid 9alpha-hydroxylase activity","type":"related"},{"name":"KshAB activity","type":"related"}],"termid":"GO:0036200"}


id: PBO:0044429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily A member 11","termid":"PBO:0044429"}


id: PR:Q9UR09
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psu1 gene.","definition_xrefs":["UniProtKB:Q9UR09","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted beta-glucosidase PSU1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.13c","synonyms":[{"name":"Spom972h-psu1","type":"exact"},{"name":"cell wall synthesis protein psu1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR09"}


id: MONDO:0850073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic unicoronal craniosynostosis","secondary_identifiers":["MEDGEN:1842408","Orphanet:620102","UMLS:C5680401","GARD:22470"],"termid":"MONDO:0850073","xrefs":{"Monarch":{"xref_id":"0850073"}}}


id: GO:1900047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hemostasis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of hemostasis","termid":"GO:1900046"},{"relation_name":"negatively_regulates","term_name":"hemostasis","termid":"GO:0007599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hemostasis","synonyms":[{"name":"down regulation of hemostasis","type":"exact"},{"name":"down-regulation of hemostasis","type":"exact"},{"name":"downregulation of hemostasis","type":"exact"},{"name":"inhibition of hemostasis","type":"narrow"}],"termid":"GO:1900047"}


id: PBO:0089170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin/calnexin homolog","termid":"PBO:0089170"}


id: PATO:0001294
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A scalar EM radiation quality which obtains by the capacity of the bearer to scatter or reflect radiation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"full-spectrum EM radiation quality","termid":"PATO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation reflective quality","termid":"PATO:0001294"}


id: MONDO:0017560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal alignment of the knee backwards that is due to a deformity in the knee joint.","definition_xrefs":["NCIT:C103184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital knee dislocation","termid":"MONDO:0017470"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital genu recurvatum","secondary_identifiers":["icd11.foundation:1709221347","SCTID:205063003","UMLS:C0152235","GARD:21225","Orphanet:295229","ICD9:754.40","MEDGEN:508941"],"synonyms":[{"name":"genu recurvatum","type":"exact"},{"name":"hyperextension deformity of knee","type":"exact"},{"name":"hyperextension of knee deformity","type":"exact"}],"termid":"MONDO:0017560","xrefs":{"Monarch":{"xref_id":"0017560"}}}


id: GO:1901456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to toluene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of response to toluene","termid":"GO:1901454"},{"relation_name":"positively_regulates","term_name":"response to toluene","termid":"GO:1901424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to toluene","synonyms":[{"name":"activation of response to toluene","type":"narrow"},{"name":"up regulation of response to toluene","type":"exact"},{"name":"up-regulation of response to toluene","type":"exact"},{"name":"upregulation of response to toluene","type":"exact"}],"termid":"GO:1901456"}


id: FYPO:0005049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin at RNA polymerase II promoters is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:20605454","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at RNA polymerase II-regulated genes during nitrogen starvation","termid":"FYPO:0005051"},{"relation_name":"is_a","term_name":"decreased protein localization to chromatin","termid":"FYPO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to chromatin at RNA polymerase II promoter during nitrogen starvation","synonyms":[{"name":"decreased protein localisation to chromatin at RNA polymerase II promoter during nitrogen depletion","type":"exact"},{"name":"decreased protein localization to chromatin at RNA pol II promoter during nitrogen starvation","type":"exact"},{"name":"decreased protein localization to chromatin at RNA polymerase II promoter during nitrogen deprivation","type":"exact"},{"name":"reduced protein localization to chromatin at RNA polymerase II promoter nitrogen starvation","type":"exact"}],"termid":"FYPO:0005049"}


id: GO:0065008
data:
  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id: GO:0050748
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id: MONDO:0031257
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pulmonary condition characterized by non-cardiogenic pulmonary edema occurring in otherwise healthy individuals within days of an ascent above 2500-3000 m. Early symptoms include exertional dyspnea, non-productive cough, chest tightness, and reduced exercise performance, followed by dyspnea at rest and possibly orthopnea, as well as gurgling in the chest and pink frothy sputum in advanced cases. Clinical signs are cyanosis, tachypnea, tachycardia, crackles or wheezing, and elevated body temperature (generally not exceeding 38.5°C). Signs of concomitant high-altitude cerebral edema may also be observed. Chest x-rays typically show patchy opacities predominantly in the right middle lobe.","definition_xrefs":["Orphanet:330012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary edema","termid":"MONDO:0006932"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high altitude pulmonary edema","secondary_identifiers":["MEDGEN:137935","UMLS:C0340100","GARD:21502"],"termid":"MONDO:0031257","xrefs":{"Monarch":{"xref_id":"0031257"}}}


id: PBO:0066776
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 74","termid":"PBO:0066776"}


id: PBO:0085399
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane protein, component of eisosomes; long-lived protein that remains stable in eisosomes of mother cells while other eisosome proteins, Pil1p and Lsp1p, turn over; may function to anchor the eisosome in place; sporulation and plasma membrane sphingolipid content are altered in mutants; localizes to furrow-like invaginations (MCC patches)","termid":"PBO:0085399"}


id: MONDO:0014225
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id: PBO:0116674
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 6 interacting protein 5","termid":"PBO:0116674"}


id: GO:1990737
data:
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id: PBO:0078386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-1","termid":"PBO:0078386"}


id: PBO:0060630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK associated protein 5 like","termid":"PBO:0060630"}


id: PBO:0086055
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, secreted when constitutively expressed; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the cell periphery, SWAT-GFP fusion also localizes to the extracellular region, and mCherry fusion also localizes to the vacuole; S/T rich and highly similar to YOL155C, a putative glucan alpha-1,4-glucosidase; transcript is induced in both high and low pH environments; non-essential gene","termid":"PBO:0086055"}


id: GO:0099060
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic specialization membrane (obsolete GO:0099060)","termid":"GO:0099060"}


id: GO:0031539
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemical reactions and pathways involving anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of anthocyanin metabolic process","termid":"GO:0031537"},{"relation_name":"positively_regulates","term_name":"anthocyanin-containing compound metabolic process","termid":"GO:0046283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anthocyanin metabolic process","synonyms":[{"name":"activation of anthocyanin metabolic process","type":"narrow"},{"name":"positive regulation of anthocyanin metabolism","type":"exact"},{"name":"stimulation of anthocyanin metabolic process","type":"narrow"},{"name":"up regulation of anthocyanin metabolic process","type":"exact"},{"name":"up-regulation of anthocyanin metabolic process","type":"exact"},{"name":"upregulation of anthocyanin metabolic process","type":"exact"}],"termid":"GO:0031539"}


id: GO:0038013
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which internalization of a Wnt receptor activates or increases the frequency, rate or extent of the Wnt signaling pathway.","definition_xrefs":["GOC:signaling","PMID:17908284","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt signaling pathway by Wnt receptor internalization (obsolete GO:0038013)","synonyms":[{"name":"positive regulation of Wnt receptor signaling pathway by Frizzled internalization","type":"related"},{"name":"positive regulation of Wnt receptor signaling pathway by LRP6 internalization","type":"narrow"},{"name":"positive regulation of Wnt receptor signaling pathway by Wnt receptor internalization","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway by Wnt receptor endocytosis","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway by Wnt receptor internalization","type":"related"}],"termid":"GO:0038013"}


id: PBO:0045703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 2","termid":"PBO:0045703"}


id: MONDO:0000942
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  {"annotated_genes":["SJAG_04387","SJAG_02509","SJAG_00638"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007376"},{"annotations":[86325,86326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054771"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the cornea. Representative examples include keratitis, bullous keratopathy, and squamous cell carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00638":null,"SJAG_02509":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:371.89","MESH:D003316","EFO:0009464","MEDGEN:3617","SCTID:15250008","DOID:10124","NCIT:C26731","UMLS:C0010034","ICD9:371.9","ICD9:371.30"],"synonyms":[{"name":"cornea disease","type":"exact"},{"name":"cornea disease or disorder","type":"exact"},{"name":"corneal disease","type":"exact"},{"name":"corneal disorder","type":"exact"},{"name":"disease of cornea","type":"exact"},{"name":"disease or disorder of cornea","type":"exact"},{"name":"disorder of cornea","type":"exact"}],"termid":"MONDO:0000942","terms_by_termid":{"MONDO:0007376":null,"MONDO:0054771":null},"xrefs":{"Monarch":{"xref_id":"0000942"}}}


id: PBO:0079156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 15","termid":"PBO:0079156"}


id: PBO:0046732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"even-skipped homeobox 2","termid":"PBO:0046732"}


id: GO:0034821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: citronellol + NAD+ = citronellal + NADH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete citronellol dehydrogenase activity (obsolete GO:0034821)","termid":"GO:0034821"}


id: MONDO:0011089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent ductus venosus (PDV) is an extremely rare form of congenital portosystemic shunt that results in the diversion of portal blood into the systemic circulation. Failure of DV closure after birth leads to PDV. PDV results in portal venous blood bypassing the liver and directly entering the systemic circulation, decreasing hepatic blood flow and increasing blood volume and toxic substances in the systemic circulation.","definition_xrefs":["PMID:36329968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital portosystemic shunt","termid":"MONDO:0018811"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent ductus venosus","secondary_identifiers":["MESH:C562830","MEDGEN:91033","OMIM:601466","UMLS:C0344688","ICD9:747.49","SCTID:253330006"],"synonyms":[{"name":"PDV","type":"related"},{"name":"PSVS","type":"related"},{"name":"patent ductus venosus","type":"exact"},{"name":"portosystemic Venous shunt, congenital","type":"related"}],"termid":"MONDO:0011089","xrefs":{"Monarch":{"xref_id":"0011089"}}}


id: GO:0045862
data:
  {"annotated_genes":["SJAG_03048","SJAG_00071","SJAG_04477","SJAG_01131","SJAG_01544","SJAG_00766","SJAG_01210","SJAG_00642","SJAG_01489","SJAG_00712","SJAG_02723","SJAG_03699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[67700,61598,67308,69120,65917,68584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[102723,112090,107022,109263,117465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis","termid":"GO:0030162"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"proteolysis","termid":"GO:0006508"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null,"SJAG_04477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of proteolysis","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of proteolysis","type":"narrow"},{"name":"positive regulation of peptidolysis","type":"exact"},{"name":"stimulation of proteolysis","type":"narrow"},{"name":"up regulation of proteolysis","type":"exact"},{"name":"up-regulation of proteolysis","type":"exact"},{"name":"upregulation of proteolysis","type":"exact"}],"termid":"GO:0045862","terms_by_termid":{"GO:0032436":null,"GO:1901800":null,"GO:1905786":null}}


id: PBO:0087527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of MRX complex with Mre11p and Xrs2p; complex is involved in processing double-strand DNA breaks in vegetative cells, initiation of meiotic DSBs, telomere maintenance, and nonhomologous end joining; forms nuclear foci upon DNA replication stress","termid":"PBO:0087527"}


id: PBO:0057299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 513c","termid":"PBO:0057299"}


id: GO:0046753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The exit of a viral particle from a host cell that does not involve cell lysis.","definition_xrefs":["ISBN:0072370319","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral release from host cell","termid":"GO:0019076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"non-lytic viral release","termid":"GO:0046753"}


id: PBO:0005318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex subunit Sfh1","termid":"PBO:0005318"}


id: FYPO:0001150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to methylamine. Cells stop growing (and may die) at a concentration of methylamine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to methylamine","synonyms":[{"name":"hypersensitive to methylamine","type":"exact"},{"name":"sensitive to methylamine during mitotic cell cycle","type":"related"},{"name":"sensitive to methylamine during vegetative growth","type":"exact"}],"termid":"FYPO:0001150"}


id: PBO:0067228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 299, pseudogene","termid":"PBO:0067228"}


id: PBO:0002770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt4","termid":"PBO:0002770"}


id: RO:0002200
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a biological entity and a phenotype. Here a phenotype is construed broadly as any kind of quality of an organism part, a collection of these qualities, or a change in quality or qualities (e.g. abnormally increased temperature). The subject of this relationship can be an organism (where the organism has the phenotype, i.e. the qualities inhere in parts of this organism), a genomic entity such as a gene or genotype (if modifications of the gene or the genotype causes the phenotype), or a condition such as a disease (such that if the condition inheres in an organism, then the organism has the phenotype).","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_phenotype","termid":"RO:0002200"}


id: PBO:0111868
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZZ type","termid":"PBO:0111868"}


id: PBO:0110040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAA40 pseudogene 1","termid":"PBO:0110040"}


id: PR:O74948
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor IIA subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10966:SF0","OMA:SCHPO04252","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor IIA subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.11c","secondary_identifiers":["UniProtKB:O74948"],"synonyms":[{"name":"Spom972h-GTF2A2","type":"exact"},{"name":"general transcription factor IIA subunit 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor IIA small chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74948"}


id: GO:0080171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lytic vacuole.","definition_xrefs":["PMID:20729380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole organization","termid":"GO:0007033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lytic vacuole organization","synonyms":[{"name":"lytic vacuolar assembly","type":"narrow"},{"name":"lytic vacuole biogenesis","type":"related"},{"name":"lytic vacuole organisation","type":"exact"},{"name":"lytic vacuole organization and biogenesis","type":"related"}],"termid":"GO:0080171"}


id: PBO:0061104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurolysin","termid":"PBO:0061104"}


id: MONDO:1010787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary hyperkeratosis characterized by generalized scaling in dogs due to a variation in the NIPAL4 gene.","definition_xrefs":["PMID:30741495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, dog","termid":"MONDO:1012978"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis NIPAL4-related, dog","secondary_identifiers":["OMIA:001980-9615"],"termid":"MONDO:1010787","xrefs":{"Monarch":{"xref_id":"1010787"}}}


id: PBO:0076995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP9 antisense RNA 1","termid":"PBO:0076995"}


id: PBO:0057417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548s","termid":"PBO:0057417"}


id: MONDO:0009699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Action myoclonus-renal failure syndrome (AMRF) is a rare epilepsy syndrome characterized by progressive myoclonus epilepsy in association with primary glomerular disease. Patients present with neurologic symptoms (including tremor, action myoclonus, tonic-clonic seizures, later ataxia and dysarthria) that may precede, occur simultaneously or be followed by renal manifestations including proteinuria that progresses to nephrotic syndrome and end-stage renal disease. In some patients, sensorimotor peripheral neuropathy, sensorineural hearing loss and dilated cardiomyopathy are associated symptoms.","definition_xrefs":["Orphanet:163696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"action myoclonus-renal failure syndrome","secondary_identifiers":["GARD:17000","UMLS:C0751779","SCTID:764453009","MEDGEN:155629","OMIM:254900","DOID:0111444"],"synonyms":[{"name":"AMRF","type":"exact"},{"name":"EPM4","type":"exact"},{"name":"action myoclonus-renal failure syndrome","type":"exact"},{"name":"epilepsy, progressive myoclonic 4, with or without renal failure","type":"exact"},{"name":"epilepsy, progressive myoclonic, 4, with or without renal failure","type":"exact"},{"name":"myoclonus-nephropathy syndrome","type":"exact"},{"name":"progressive myoclonic epilepsy type 4","type":"exact"}],"termid":"MONDO:0009699","xrefs":{"Monarch":{"xref_id":"0009699"}}}


id: PR:O43023
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transferrin receptor protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02508","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inactive zinc metalloprotease C354.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.09c","secondary_identifiers":["UniProtKB:O43023"],"synonyms":[{"name":"Spom972h-TFR2","type":"exact"}],"termid":"PR:O43023"}


id: FYPO:0004088
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the morphology of cytoplasmic microtubules is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0002399","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"abnormal cytoplasmic microtubules","synonyms":[{"name":"abnormal cytoplasmic microtubule morphology","type":"exact"},{"name":"abnormal cytoplasmic microtubule structure","type":"narrow"},{"name":"abnormal cytoplasmic microtubules during mitotic cell cycle","type":"related"},{"name":"abnormal cytoplasmic microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0004088"}


id: GO:0047263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ceramide + UDP-galactose = D-galactosylceramide + UDP.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete N-acylsphingosine galactosyltransferase activity (obsolete GO:0047263)","termid":"GO:0047263"}


id: PBO:0069131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 381, pseudogene","termid":"PBO:0069131"}


id: GO:0071931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases transcription as part of the G1/S transition of the mitotic cell cycle.","definition_xrefs":["GOC:vw","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in G1/S transition of mitotic cell cycle (obsolete GO:0071931)","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter during G1/S phase of mitotic cell cycle","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in G1/S transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0071931"}


id: FYPO:0007941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is normal (i.e. indistinguishable from wild type) during  the meiotic cell cycle. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during meiotic cell cycle","termid":"FYPO:0007277"},{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal chromatin organization during meiotic cell cycle","synonyms":[{"name":"normal chromatin organisation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0007941"}


id: PBO:0089590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 cyclin Puc1","termid":"PBO:0089590"}


id: GO:1903176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of tyrosine 3-monooxygenase activity.","definition_xrefs":["GOC:bf","GO_REF:0000059","GOC:TermGenie","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of tyrosine 3-monooxygenase activity (obsolete GO:1903176)","synonyms":[{"name":"regulation of L-tyrosine hydroxylase activity","type":"exact"},{"name":"regulation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"exact"},{"name":"regulation of tyrosine 3-hydroxylase activity","type":"exact"},{"name":"regulation of tyrosine hydroxylase activity","type":"exact"}],"termid":"GO:1903176"}


id: FYPO:0006941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to actin cortical patches for a longer time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actin cortical patch","termid":"FYPO:0000742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of protein localization to actin cortical patch","synonyms":[{"name":"increased duration of protein localisation to actin cortical patch","type":"exact"},{"name":"increased duration of protein localization to F-actin patch","type":"exact"},{"name":"increased duration of protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to actin cortical patch involved in mitotic cytokinesis","type":"exact"},{"name":"increased duration of protein localization to actin patch","type":"exact"}],"termid":"FYPO:0006941"}


id: PBO:0077738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenascin XA (pseudogene)","termid":"PBO:0077738"}


id: PBO:0051205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-31","termid":"PBO:0051205"}


id: GO:0000146
data:
  {"annotated_genes":["SJAG_03011","SJAG_00938","SJAG_03703","SJAG_02431","SJAG_04001"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70370,71317,74757,76999,79959],"is_not":false,"summary":null,"term":"GO:0000146"}]},"cv_name":"molecular_function","definition":"A motor activity that generates movement along a microfilament, driven by ATP hydrolysis.","definition_xrefs":["PMID:29716949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal motor activity","termid":"GO:0003774"},{"relation_name":"is_a","term_name":"polypeptide conformation or assembly isomerase activity","termid":"GO:0120544"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02431":null,"SJAG_03011":null,"SJAG_03703":null,"SJAG_04001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003774","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"microfilament motor activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9023171","GO:0030898","EC:5.6.1.8","Reactome:R-HSA-432237","Reactome:R-HSA-2316352"],"synonyms":[{"name":"actin filament motor activity","type":"exact"},{"name":"actin-activated ATPase activity","type":"exact"},{"name":"actin-dependent ATPase activity","type":"exact"},{"name":"actin-filament motor activity","type":"exact"},{"name":"muscle motor activity","type":"narrow"},{"name":"myosin ATPase activity","type":"related"}],"termid":"GO:0000146","terms_by_termid":{"GO:0000146":null}}


id: GO:0035337
data:
  {"annotated_genes":["SJAG_03471","SJAG_04007","SJAG_03909"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[77607,79181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035336"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a fatty-acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty-acyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null,"SJAG_04007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0006629","GO:0055086"],"is_obsolete":false,"name":"fatty-acyl-CoA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fatty acyl CoA metabolic process","type":"exact"},{"name":"fatty-acyl-CoA metabolism","type":"exact"}],"termid":"GO:0035337","terms_by_termid":{"GO:0035336":null,"GO:0035338":null}}


id: PBO:0061910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily AB member 1 pseudogene","termid":"PBO:0061910"}


id: PBO:0087579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the anaphase-promoting complex (APC); APC is an E3 ubiquitin ligase that regulates the metaphase-anaphase transition and exit from mitosis; required for activation of the daughter-specific gene expression and spore wall maturation","termid":"PBO:0087579"}


id: PBO:0057706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1293","termid":"PBO:0057706"}


id: FYPO:0004219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 20 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone methylation during vegetative growth","termid":"FYPO:0000861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal histone H4-K20 methylation during vegetative growth","synonyms":[{"name":"normal histone H4 K20 methylation during vegetative growth","type":"exact"},{"name":"normal histone H4-K20 methylation during mitotic cell cycle","type":"related"},{"name":"normal histone H4K20me during vegetative growth","type":"exact"},{"name":"normal histone lysine H4 K20 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004219"}


id: GO:2001270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cysteine-type endopeptidase activity involved in execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis (obsolete GO:2001270)","synonyms":[{"name":"regulation of effector caspase activity","type":"narrow"}],"termid":"GO:2001270"}


id: MONDO:0009975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An antiquated term that refers to a non-Hodgkin lymphoma composed of diffuse infiltrates of large, often anaplastic lymphocytes.","definition_xrefs":["NCIT:C27824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system cancer","termid":"MONDO:0000612"},{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"},{"relation_name":"is_a","term_name":"dendritic cell tumor","termid":"MONDO:0020082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"reticulum cell sarcoma","secondary_identifiers":["DOID:8538","ICD9:200.0","ICD9:200.00","MEDGEN:44224","OMIM:267730","MedDRA:10038804","Orphanet:86900","MESH:D008228","SCTID:373168002","UMLS:C0024302","EFO:0005287","GARD:16765","ICD9:200.7","MESH:D054739"],"synonyms":[{"name":"Reticulum cell sarcoma","type":"exact"},{"name":"histiocytic lymphoma","type":"exact"},{"name":"interdigitating cell sarcoma","type":"exact"},{"name":"large-cell Lymphomas","type":"exact"},{"name":"reticular cell sarcoma","type":"exact"},{"name":"reticulosarcoma","type":"exact"},{"name":"reticulum cell sarcoma","type":"exact"},{"name":"sarcoma of reticular cell","type":"exact"}],"termid":"MONDO:0009975","xrefs":{"Monarch":{"xref_id":"0009975"}}}


id: GO:0001096
data:
  {"annotated_genes":["SJAG_00095"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79485],"is_not":false,"summary":null,"term":"GO:0001096"}]},"cv_name":"molecular_function","definition":"Binding to a general RNA polymerase II transcription factor belonging to the TFIIF complex, one of the factors involved in formation of the preinitiation complex (PIC) by RNA polymerase II.","definition_xrefs":["PMID:16858867","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II general transcription initiation factor binding","termid":"GO:0001091"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00095":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"TFIIF-class transcription factor complex binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"TFIIF-class transcription factor binding","type":"exact"}],"termid":"GO:0001096","terms_by_termid":{"GO:0001096":null}}


id: PBO:0016538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, associated with clathrin coated vesicles (predicted)","termid":"PBO:0016538"}


id: GO:0097745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the 5' end of a pre-tRNA molecule is converted to that of a mature tRNA in the mitochondrion.","definition_xrefs":["PMID:21307182","PMID:27484477","PMID:26143376","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA 5'-end processing","termid":"GO:0000964"},{"relation_name":"is_a","term_name":"mitochondrial tRNA processing","termid":"GO:0090646"},{"relation_name":"is_a","term_name":"tRNA 5'-end processing","termid":"GO:0099116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0140053","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"mitochondrial tRNA 5'-end processing","termid":"GO:0097745"}


id: PBO:0043850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3b/C4b receptor 1 like","termid":"PBO:0043850"}


id: PBO:0017713
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GF14","termid":"PBO:0017713"}


id: MONDO:0000042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperprolinemia (obsolete MONDO:0000042)","termid":"MONDO:0000042","xrefs":{"Monarch":{"xref_id":"0000042"}}}


id: PBO:0063507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 and DNA damage regulated 1","termid":"PBO:0063507"}


id: GO:0005583
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any triple helical collagen trimer that forms fibrils.","definition_xrefs":["GOC:mah","ISBN:0721639976","PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"},{"relation_name":"part_of","term_name":"fibrillar collagen","termid":"GO:0098643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"fibrillar collagen trimer","termid":"GO:0005583"}


id: GO:0004665
data:
  {"annotated_genes":["SJAG_04652"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68154],"is_not":false,"summary":null,"term":"GO:0004665"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + prephenate = (4-hydroxyphenyl)pyruvate + CO2 + NADPH.","definition_xrefs":["EC:1.3.1.13","RHEA:21640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04652":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"prephenate dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R01730","MetaCyc:PREPHENATE-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"prephenate (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"},{"name":"prephenate:NADP+ oxidoreductase (decarboxylating)","type":"related"}],"termid":"GO:0004665","terms_by_termid":{"GO:0004665":null}}


id: PBO:0038969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine A1 receptor","termid":"PBO:0038969"}


id: PBO:0067276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 354, pseudogene","termid":"PBO:0067276"}


id: GO:0010221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the vernalization response, by which induction of flowering is normally caused by extended exposure to cold temperatures.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vernalization response","termid":"GO:0010219"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"vernalization response","termid":"GO:0010048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vernalization response","synonyms":[{"name":"down regulation of vernalization response","type":"exact"},{"name":"down-regulation of vernalization response","type":"exact"},{"name":"downregulation of vernalization response","type":"exact"},{"name":"inhibition of vernalization response","type":"narrow"}],"termid":"GO:0010221"}


id: FYPO:0003547
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of DNA damage measured in a cell is greater than normal. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage","termid":"FYPO:0003546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased DNA damage during vegetative growth","synonyms":[{"name":"increased DNA damage during mitotic cell cycle","type":"related"},{"name":"increased number of DNA lesions during vegetative growth","type":"related"},{"name":"increased spontaneous DNA lesions during vegetative growth","type":"related"}],"termid":"FYPO:0003547"}


id: MONDO:0022716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Chiari malformation","termid":"MONDO:0000115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chiari malformation type 4","secondary_identifiers":["UMLS:C0750932","SCTID:253187005","MEDGEN:148203"],"synonyms":[{"name":"Arnold Chiari malformation type IV","type":"related"},{"name":"Chiari malformation type IV","type":"related"},{"name":"Chiari type IV malformation","type":"related"}],"termid":"MONDO:0022716","xrefs":{"Monarch":{"xref_id":"0022716"}}}


id: MONDO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extranodal lymphoma that arises from the cecum. The majority are B-cell non-Hodgkin lymphomas.","definition_xrefs":["NCIT:C5515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cecum cancer","termid":"MONDO:0002033"},{"relation_name":"is_a","term_name":"colon lymphoma","termid":"MONDO:0002035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0004335"],"is_obsolete":false,"name":"cecum lymphoma","secondary_identifiers":["DOID:1522","UMLS:C1332867","MEDGEN:232035"],"synonyms":[{"name":"caecum lymphoma","type":"exact"},{"name":"cecal lymphoma","type":"exact"},{"name":"cecum lymphoma","type":"exact"},{"name":"lymphoma of caecum","type":"exact"},{"name":"lymphoma of cecum","type":"exact"},{"name":"lymphoma of the cecum","type":"exact"},{"name":"primary cecum lymphoma","type":"exact"}],"termid":"MONDO:0002034","xrefs":{"Monarch":{"xref_id":"0002034"}}}


id: GO:0055101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of a glycerophospholipase, an enzyme that catalyzes of the hydrolysis of a glycerophospholipid.","definition_xrefs":["GOC:ai","GOC:rl","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete glycerophospholipase inhibitor activity (obsolete GO:0055101)","synonyms":[{"name":"glycerophospholipase inhibitor activity","type":"exact"}],"termid":"GO:0055101"}


id: GO:0035313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of an epidermal cell along or through a wound gap that contributes to the reestablishment of a continuous epidermis.","definition_xrefs":["PMID:15269788","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wound healing, spreading of cells","termid":"GO:0044319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wound healing, spreading of epidermal cells","termid":"GO:0035313"}


id: MONDO:0014002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nocturnal frontal lobe epilepsy in which the cause of the disease is a mutation in the KCNT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-related hypermotor epilepsy","termid":"MONDO:0000030"},{"relation_name":"is_a","term_name":"autosomal dominant nocturnal frontal lobe epilepsy","termid":"MONDO:0020300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"autosomal dominant nocturnal frontal lobe epilepsy 5","secondary_identifiers":["MEDGEN:767220","OMIM:615005","UMLS:C3554306","DOID:0060686","GARD:15891"],"synonyms":[{"name":"ENFL5","type":"exact"},{"name":"KCNT1 autosomal dominant nocturnal frontal lobe epilepsy","type":"exact"},{"name":"autosomal dominant nocturnal frontal lobe epilepsy caused by mutation in KCNT1","type":"exact"},{"name":"autosomal dominant nocturnal frontal lobe epilepsy type 5","type":"exact"},{"name":"epilepsy nocturnal frontal lobe, 5","type":"exact"},{"name":"epilepsy, nocturnal frontal lobe, 5","type":"related"},{"name":"epilepsy, nocturnal frontal lobe, type 5","type":"exact"},{"name":"nocturnal frontal lobe epilepsy 5","type":"exact"}],"termid":"MONDO:0014002","xrefs":{"Monarch":{"xref_id":"0014002"}}}


id: PBO:0067943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 245","termid":"PBO:0067943"}


id: PBO:0045310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 3 like","termid":"PBO:0045310"}


id: GO:0061284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the proximal tubule of the mesonephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of mesonephric nephron tubule identity","termid":"GO:0061282"},{"relation_name":"is_a","term_name":"specification of proximal tubule identity","termid":"GO:0072082"},{"relation_name":"part_of","term_name":"mesonephric proximal tubule morphogenesis","termid":"GO:0061276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of mesonephric proximal tubule identity","termid":"GO:0061284"}


id: MONDO:0006493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma characterized by an oncocytic, often papillary, epithelial component, dense lymphoid stroma, and cystic spaces. It occurs primarily in the parotid gland, and is the second most common benign parotid salivary gland tumor. A strong association with smoking has been reported. It typically presents as a painless swelling in the lower portion of the parotid gland.","definition_xrefs":["NCIT:C2854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system adenoma","termid":"MONDO:0006180"},{"relation_name":"is_a","term_name":"benign neoplasm of salivary gland","termid":"MONDO:0021460"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Warthin tumor","secondary_identifiers":["EFO:1000625","SCTID:422470007","MESH:D000235","UMLS:C0001429","ICDO:8561/0","MEDGEN:124"],"synonyms":[{"name":"Warthin tumor","type":"exact"},{"name":"Warthin's tumor","type":"exact"},{"name":"Warthin's tumour","type":"exact"},{"name":"adenolymphoma","type":"exact"},{"name":"papillary cystadenoma lymphomatosum","type":"related"},{"name":"papillary cystadenoma lymphomatosum (formerly)","type":"related"}],"termid":"MONDO:0006493","xrefs":{"Monarch":{"xref_id":"0006493"}}}


id: MONDO:0044327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant disease characterized by adult-onset of liver cysts arising from the bile duct epithelium, caused by heterozygous mutation in the LRP5 gene. Some patients may develop a few kidney cysts, but these are often incidental and do not result in renal failure.","definition_xrefs":["OMIM:617875","PMID:24706814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic liver disease","termid":"MONDO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"polycystic liver disease 4 with or without kidney cysts","secondary_identifiers":["MEDGEN:1644991","UMLS:C4693479","DOID:0060977"],"synonyms":[{"name":"PCLD4","type":"related"},{"name":"polycystic liver disease 4 with or without kidney cysts","type":"exact"}],"termid":"MONDO:0044327","xrefs":{"Monarch":{"xref_id":"0044327"}}}


id: PBO:0089214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, meiotic Mug117","termid":"PBO:0089214"}


id: PATO:0001472
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A depth which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"depth","termid":"PATO:0001595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased depth","secondary_identifiers":["PATO:0001692"],"synonyms":[{"name":"low depth","type":"exact"},{"name":"shallow","type":"exact"}],"termid":"PATO:0001472"}


id: PBO:0090854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase II Urg1","termid":"PBO:0090854"}


id: PR:P36605
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histidinol-phosphate aminotransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02885","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphate aminotransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.02c","secondary_identifiers":["UniProtKB:P36605"],"synonyms":[{"name":"Spom972h-hisC","type":"exact"},{"name":"imidazole acetol-phosphate transaminase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36605"}


id: PBO:0083015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defining member of the SET3 histone deacetylase complex; which is a meiosis-specific repressor of sporulation genes; necessary for efficient transcription by RNAPII; one of two yeast proteins that contains both SET and PHD domains; SET3 has a paralog, SET4, that arose from the whole genome duplication","termid":"PBO:0083015"}


id: GO:0005300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the high-affinity transfer of L-tryptophan from one side of a membrane to the other. Tryptophan is 2-amino-3-(1H-indol-3-yl)propanoic acid. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan transmembrane transporter activity","termid":"GO:0015196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"high-affinity tryptophan transmembrane transporter activity","synonyms":[{"name":"high-affinity tryptophan transporter activity","type":"broad"}],"termid":"GO:0005300"}


id: PBO:0091624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHE domain cation binding protein","termid":"PBO:0091624"}


id: PR:O14388
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2701 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L27-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.07c","synonyms":[{"name":"Spom972h-rpl2701","type":"exact"}],"termid":"PR:O14388"}


id: PBO:0090798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Yar1","termid":"PBO:0090798"}


id: GO:0046033
data:
  {"annotated_genes":["SJAG_02038","SJAG_01859","SJAG_02850","SJAG_00044","SJAG_01070","SJAG_04123"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59506,76772],"is_not":false,"summary":null,"term":"GO:0046033"},{"annotations":[77147,79163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[57108,74298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving AMP, adenosine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate metabolic process","termid":"GO:0009167"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_02038":null,"SJAG_02850":null,"SJAG_04123":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"AMP metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null},"synonyms":[{"name":"AMP metabolism","type":"exact"},{"name":"adenylate forming enzyme activity","type":"related"}],"termid":"GO:0046033","terms_by_termid":{"GO:0044208":null,"GO:0044209":null,"GO:0046033":null}}


id: PBO:0074477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMUG1 antisense RNA 1","termid":"PBO:0074477"}


id: PBO:0046438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPM2A divergent transcript","termid":"PBO:0046438"}


id: GO:0050900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte within or between different tissues and organs of the body.","definition_xrefs":["ISBN:0781735149","PMID:7507411","PMID:8600538","PMID:14708592","PMID:14680625","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte migration","secondary_identifiers":["Reactome:R-HSA-202733"],"synonyms":[{"name":"immune cell migration","type":"exact"},{"name":"immune cell trafficking","type":"exact"},{"name":"leucocyte migration","type":"exact"},{"name":"leucocyte trafficking","type":"exact"},{"name":"leukocyte trafficking","type":"exact"}],"termid":"GO:0050900"}


id: PBO:0025526
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae HSP104","termid":"PBO:0025526"}


id: PBO:0065726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader-Willi region non-protein coding RNA 3","termid":"PBO:0065726"}


id: FYPO:0000010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which cells fail to adhere to a substrate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion during vegetative growth","termid":"FYPO:0000009"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell-substrate adhesion","synonyms":[{"name":"abolished cell-substrate adhesion during mitotic cell cycle","type":"related"},{"name":"cell-substrate adhesion abolished","type":"exact"},{"name":"cell-substrate adhesion abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000010"}


id: MONDO:0021918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arena syndrome","secondary_identifiers":["MESH:C537428","UMLS:C2931491","MEDGEN:444068"],"synonyms":[{"name":"spastic paraplegia with iron deposits in basal ganglia","type":"related"}],"termid":"MONDO:0021918","xrefs":{"Monarch":{"xref_id":"0021918"}}}


id: MONDO:0007055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare bone dysplasia characterized by short stature, short hands and feet, mild facial dysmorphism, and characteristic X-ray abnormalities of the hands.","definition_xrefs":["Orphanet:969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acromicric dysplasia","secondary_identifiers":["OMIM:102370","SCTID:254090007","UMLS:C0265287","ICD9:756.59","MEDGEN:78549","GARD:7","DOID:0111243","icd11.foundation:1006372687","MESH:C535662"],"synonyms":[{"name":"ACMICD","type":"related"},{"name":"Acromicric dysplasia","type":"exact"},{"name":"Acromicric skeletal dysplasia","type":"related"}],"termid":"MONDO:0007055","xrefs":{"Monarch":{"xref_id":"0007055"}}}


id: PBO:0003477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation termination factor Rrf1","termid":"PBO:0003477"}


id: GO:0048101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: nucleoside 3',5'-cyclic GMP + H2O = GMP + H+; this activity is activated by binding to calcium-bound calmodulin.","definition_xrefs":["GOC:jid","PMID:35216259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-GMP phosphodiesterase activity","termid":"GO:0047555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"calmodulin-activated 3',5'-cyclic-GMP phosphodiesterase activity","synonyms":[{"name":"calcium- and calmodulin-regulated 3',5'-cyclic-GMP phosphodiesterase activity","type":"broad"},{"name":"calcium- and calmodulin-regulated cGMP phosphodiesterase activity","type":"related"},{"name":"calcium- and calmodulin-regulated cGMP-specific phosphodiesterase activity","type":"exact"},{"name":"calcium- and calmodulin-regulated cyclic-GMP phosphodiesterase activity","type":"exact"},{"name":"calcium/calmodulin-regulated cGMP-specific phosphodiesterase activity","type":"exact"}],"termid":"GO:0048101"}


id: FYPO:0005362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromosome recapture is abnormal during metaphase of mitosis. Chromosome recapture is the reattachment of chromosomes which have become detached from the spindle.","definition_xrefs":["PomBase:mah","GO:1990942","PMID:18256284"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome congression","termid":"FYPO:0000030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000631","FYPO:0000337","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitotic metaphase chromosome recapture","synonyms":[{"name":"abnormal chromosome recapture during mitotic metaphase","type":"exact"},{"name":"abnormal kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"abnormal mitotic kinetochore retrieval","type":"exact"},{"name":"abnormal mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"abnormal mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"abnormal mitotic sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0005362"}


id: PBO:0089567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GEF Sec2","termid":"PBO:0089567"}


id: MONDO:0005246
data:
  {"annotated_genes":["SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012316"}]},"cv_name":"mondo","definition":"An acute or chronic inflammation of the bone and its structures due to infection with pyogenic bacteria.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"bone inflammation disease","termid":"MONDO:0002614"},{"relation_name":"is_a","term_name":"bone marrow disorder","termid":"MONDO:0003225"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"osteomyelitis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:10497","SCTID:60168000","MESH:D010019","ICD9:730.11","GARD:7286","ICD9:730.01","EFO:0003102","ICD9:730.94","ICD9:730.96","ICD9:730.0","ICD9:730.20","ICD9:730.93","UMLS:C0029443","ICD9:730.10","ICD9:730.28","DOID:1019","ICD9:730.97","HP:0002754","NCIT:C27577","ICD9:730.1","ICD9:730.92"],"synonyms":[{"name":"osteomyelitis","type":"exact"},{"name":"osteomyelitis (disease)","type":"exact"}],"termid":"MONDO:0005246","terms_by_termid":{"MONDO:0012316":null},"xrefs":{"Monarch":{"xref_id":"0005246"}}}


id: PBO:0077761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20 pseudogene 3","termid":"PBO:0077761"}


id: FYPO:0006574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to a pheromone is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level","termid":"FYPO:0000840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during cellular response to pheromone","synonyms":[{"name":"normal RNA accumulation during cellular response to pheromone","type":"related"},{"name":"normal mRNA level during cellular response to pheromone","type":"narrow"},{"name":"normal transcript level during cellular response to pheromone","type":"exact"}],"termid":"FYPO:0006574"}


id: PBO:0078760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 3","termid":"PBO:0078760"}


id: PBO:0046419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A4","termid":"PBO:0046419"}


id: PBO:0064055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 89","termid":"PBO:0064055"}


id: PBO:0002447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease II (RNB) family (predicted)","termid":"PBO:0002447"}


id: PBO:0043695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 1","termid":"PBO:0043695"}


id: PBO:0042431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC37L1 divergent transcript","termid":"PBO:0042431"}


id: GO:0030104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of water within an organism or cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete water homeostasis (obsolete GO:0030104)","secondary_identifiers":["Wikipedia:Osmoregulation"],"synonyms":[{"name":"osmoregulation","type":"related"},{"name":"regulation of osmotic pressure","type":"exact"}],"termid":"GO:0030104"}


id: PBO:0026735
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_regulation_upon_nitrogen_source_shift","termid":"PBO:0026735"}


id: PBO:0084489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein; component of the Synaptonemal Complex (SC) along with Gmc2p; required for efficient crossover formation and for the efficient loading of the SC transverse filament protein, Zip1p; is SUMOlytaed in a Gmc2p manner, and SUMOylation is required for its function in meiosis; GFP fusion protein is present in discrete clusters in the nucleus throughout mitosis; may be involved in maintaining chromatin structure","termid":"PBO:0084489"}


id: PBO:0068998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 242, pseudogene","termid":"PBO:0068998"}


id: GO:1900983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vindoline.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:23864440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid indole alkaloid metabolic process","termid":"GO:0046447"},{"relation_name":"is_a","term_name":"acetate ester metabolic process","termid":"GO:1900619"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"vindoline metabolic process","synonyms":[{"name":"vindoline metabolism","type":"exact"}],"termid":"GO:1900983"}


id: MONDO:0009597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metaphyseal chondrodysplasia","termid":"MONDO:0000138"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"metaphyseal chondrodysplasia, Spahr type","secondary_identifiers":["MESH:C537353","GARD:3563","OMIM:250400","SCTID:254084008","Orphanet:2501","UMLS:C0432225","icd11.foundation:1856002752","MEDGEN:140928"],"synonyms":[{"name":"MDST","type":"related"},{"name":"Spahr type metaphyseal chondrodysplasia","type":"related"},{"name":"metaphyseal chondrodysplasia Spahr type","type":"related"},{"name":"metaphyseal chondrodysplasia, Spahr type","type":"exact"},{"name":"metaphyseal dysplasia, Spahr type","type":"related"}],"termid":"MONDO:0009597","xrefs":{"Monarch":{"xref_id":"0009597"}}}


id: MONDO:0007225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibular aplasia-ectrodactyly syndrome is characterized by fibular aplasia and ectrodactyly. Less than 50 familial and sporadic cases have been reported in the literature. Shortening of the femur, a curved tibia, severe foot anomalies and pathologies of the hip, knee and ankle may also be present. The disorder is probably inherited as an autosomal dominant trait, with reduced penetrance, especially in females.","definition_xrefs":["Orphanet:1118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"fibular aplasia-ectrodactyly syndrome","secondary_identifiers":["GARD:2331","OMIM:113310","UMLS:C1862100","MEDGEN:396290","MESH:C537930"],"synonyms":[{"name":"brachydactyly-ectrodactyly with fibular aplasia or hypoplasia","type":"related"},{"name":"fibular aplasia ectrodactyly","type":"related"}],"termid":"MONDO:0007225","xrefs":{"Monarch":{"xref_id":"0007225"}}}


id: PBO:0087647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Hap2p/3p/4p/5p CCAAT-binding complex; complex is heme-activated and glucose-repressed; complex is a transcriptional activator and global regulator of respiratory gene expression; contains sequences sufficient for both complex assembly and DNA binding; respiratory defect of the null mutant is functionally complemented by human NFYA","termid":"PBO:0087647"}


id: PBO:0042709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin EGF LAG seven-pass G-type receptor 1","termid":"PBO:0042709"}


id: PBO:0090388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, calcineurin responsive Prz1","termid":"PBO:0090388"}


id: PBO:0089078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein associated with stress granule","termid":"PBO:0089078"}


id: GO:0060837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a blood vessel endothelial cell, a thin flattened cell that lines the inside surfaces of blood vessels.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell differentiation","termid":"GO:0045446"},{"relation_name":"part_of","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}


id: SO:0002212
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A self replicating linear nucleic acid molecule that is distinct from a chromosome in the organism. They are capped by terminal proteins covalently bound to the 5' ends of the DNA.","definition_xrefs":["PMID:21719542","SBOL:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmid","termid":"SO:0000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear_plasmid","synonyms":[{"name":"linear plasmid","type":"exact"}],"termid":"SO:0002212"}


id: MONDO:0021082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a Meckel's diverticulum.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ileal neoplasm","termid":"MONDO:0006801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Meckel diverticulum neoplasm","secondary_identifiers":["MEDGEN:577167","UMLS:C0345839","SCTID:126836001"],"synonyms":[{"name":"Meckel's diverticulum neoplasm","type":"exact"},{"name":"Meckel's diverticulum neoplasm (disease)","type":"exact"},{"name":"Meckel's diverticulum tumor","type":"exact"},{"name":"Meckel's diverticulum tumour","type":"exact"},{"name":"neoplasm of Meckel's diverticulum","type":"exact"},{"name":"tumor of Meckel's diverticulum","type":"exact"},{"name":"tumour of Meckel's diverticulum","type":"exact"}],"termid":"MONDO:0021082","xrefs":{"Monarch":{"xref_id":"0021082"}}}


id: SO:0001656
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the molecule, interacts selectively and non-covalently with metal ions.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding_site","termid":"SO:0000409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal_binding_site","synonyms":[{"name":"metal binding site","type":"related"}],"termid":"SO:0001656"}


id: PBO:0004571
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localizes to DNA damage foci","termid":"PBO:0004571"}


id: PBO:0038563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding transcription modulator","termid":"PBO:0038563"}


id: PBO:0079264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 36","termid":"PBO:0079264"}


id: PBO:0004541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucan 1,6-beta-glucosidase Exg1","termid":"PBO:0004541"}


id: PBO:0058823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8053","termid":"PBO:0058823"}


id: PBO:0018099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty-acyl-CoA binding binding protein Acb1 (predicted)","termid":"PBO:0018099"}


id: GO:0061970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves the right sidedness in an organism's body plan or part of an organism with respect to the left and right halves.","definition_xrefs":["PMID:18629866","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of left/right asymmetry","termid":"GO:0061968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of right sidedness","termid":"GO:0061970"}


id: GO:0031240
data:
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id: RO:0002243
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id: PBO:0048087
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id: GO:0100001
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id: GO:0006325
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architecture","type":"exact"},{"name":"establishment or maintenance of chromatin architecture","type":"exact"},{"name":"transcription-coupled nucleosome assembly","type":"narrow"}],"termid":"GO:0006325","terms_by_termid":{"GO:0000183":null,"GO:0006325":null,"GO:0006334":null,"GO:0006335":null,"GO:0006337":null,"GO:0006338":null,"GO:0010964":null,"GO:0030466":null,"GO:0031048":null,"GO:0031445":null,"GO:0031453":null,"GO:0031507":null,"GO:0031508":null,"GO:0031509":null,"GO:0033696":null,"GO:0034080":null,"GO:0034728":null,"GO:0040029":null,"GO:0045814":null,"GO:0045815":null,"GO:0060906":null,"GO:0061188":null,"GO:0070828":null,"GO:0090052":null,"GO:0090053":null,"GO:0090055":null,"GO:0140462":null,"GO:0140588":null,"GO:0140673":null,"GO:0140718":null,"GO:0140719":null,"GO:0140727":null,"GO:0140861":null,"GO:0140898":null,"GO:0141005":null,"GO:0141194":null,"GO:1902794":null,"GO:1902795":null,"GO:1902801":null}}


id: PBO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Lsb6 (predicted)","termid":"PBO:0001119"}


id: MONDO:1010559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spina bifida that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida, non-human animal","termid":"MONDO:1010047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida, sheep","secondary_identifiers":["OMIA:000933-9940"],"termid":"MONDO:1010559","xrefs":{"Monarch":{"xref_id":"1010559"}}}


id: PBO:0074272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 13","termid":"PBO:0074272"}


id: GO:1903503
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of ATPase inhibitor activity.","definition_xrefs":["GO_REF:0000088","GOC:bhm","PMID:16170325","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ATPase inhibitor complex","termid":"GO:1903503"}


id: FYPO:0002072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a prospore has a nucleus in an abnormal location. The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"},{"relation_name":"output_of","term_name":"abnormal nucleus positioning in prospore","termid":"FYPO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mislocalized nucleus in prospore","synonyms":[{"name":"abnormal nucleus location in prospore","type":"exact"},{"name":"abnormal nucleus position in prospore","type":"exact"},{"name":"displaced nucleus in prospore","type":"exact"},{"name":"displaced nucleus prospore","type":"exact"},{"name":"mislocalised nucleus in prospore","type":"exact"},{"name":"mislocalized nucleus in forespore","type":"exact"},{"name":"mislocalized prospore nucleus","type":"exact"},{"name":"misplaced prospore nuclei","type":"exact"},{"name":"misplaced prospore nucleus","type":"exact"},{"name":"nuclear displacement in prospore","type":"exact"}],"termid":"FYPO:0002072"}


id: PBO:0090172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin-dependent (CaMKK) protein kinase Ssp1","termid":"PBO:0090172"}


id: GO:0005929
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface and of some cytoplasmic parts. Each cilium is largely bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored to a basal body.","definition_xrefs":["GOC:vw","ISBN:0198547684","GOC:cilia","PMID:16824949","GOC:kmv","PMID:17009929","PMID:20144998","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-bounded organelle","termid":"GO:0043227"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cilium","secondary_identifiers":["GO:0072372","FMA:67181","NIF_Subcellular:sao787716553","Wikipedia:Cilium"],"synonyms":[{"name":"eukaryotic flagellum","type":"exact"},{"name":"flagellum","type":"related"},{"name":"microtubule-based flagellum","type":"exact"},{"name":"primary cilium","type":"narrow"}],"termid":"GO:0005929"}


id: GO:1990594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-altrarate = 5-dehydro-4-deoxy-D-glucarate + H2O.","definition_xrefs":["PMID:17649980"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"L-altrarate dehydratase activity","secondary_identifiers":["RHEA:44028"],"synonyms":[{"name":"L-talarate dehydratase activity","type":"exact"}],"termid":"GO:1990594"}


id: FYPO:0005501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"abolished protein localisation to cell cortex, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell cortex, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"protein localization to cell cortex abolished, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein mislocalized from cortical regions to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0005501"}


id: PBO:0086972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of dolichyl phosphate mannose (DPM) synthase; identified based on comparisons of the genome sequences of six Saccharomyces species; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0086972"}


id: _global:causally_upstream_of_or_within,_negative_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of_or_within","termid":"_global:causally_upstream_of_or_within"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within,_negative_effect","secondary_identifiers":["RO:0004046"],"termid":"_global:causally_upstream_of_or_within,_negative_effect"}


id: PBO:0002885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Imp3 (predicted)","termid":"PBO:0002885"}


id: PBO:0038740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin maturation protease","termid":"PBO:0038740"}


id: GO:1904191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of cyclin-dependent protein serine/threonine kinase activity that is involved in meiotic nuclear division.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:15791259"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in meiotic nuclear division (obsolete GO:1904191)","synonyms":[{"name":"activation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"narrow"},{"name":"positive regulation of CDK activity involved in meiotic nuclear division","type":"exact"},{"name":"positive regulation of cyclin-dependent protein kinase activity involved in meiosis","type":"broad"},{"name":"stimulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"narrow"},{"name":"up regulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"exact"},{"name":"up-regulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"exact"},{"name":"upregulation of cyclin-dependent protein kinase activity involved in meiotic nuclear division","type":"exact"}],"termid":"GO:1904191"}


id: PBO:0070446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 3","termid":"PBO:0070446"}


id: PBO:0090787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex histone chaperone module subunit Swc2","termid":"PBO:0090787"}


id: GO:0097628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a distal tip cell.","definition_xrefs":["CL:0000661","GOC:mm2","PMID:24968003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"distal tip cell migration","termid":"GO:0097628"}


id: PBO:0051834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 8","termid":"PBO:0051834"}


id: PBO:0088584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein 2","termid":"PBO:0088584"}


id: MONDO:0019525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetrasomy X is a sex chromosome anomaly caused by the presence of two extra X chromosomes in females (48,XXXX instead of 46,XX).","definition_xrefs":["Orphanet:9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"},{"relation_name":"is_a","term_name":"tetrasomy","termid":"MONDO:0030502"},{"relation_name":"is_a","term_name":"chromosome X disorder","termid":"MONDO:0700027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"tetrasomy X","secondary_identifiers":["MESH:C536502","ICD9:758.81","SCTID:10567003","icd11.foundation:1181464236","UMLS:C0265496","GARD:7754","MEDGEN:120544"],"synonyms":[{"name":"48 XXXX","type":"related"},{"name":"48 XXXX syndrome","type":"related"},{"name":"48,XXXX syndrome","type":"exact"},{"name":"quadruple X","type":"exact"},{"name":"tetra X","type":"exact"},{"name":"tetrasomy type X","type":"exact"}],"termid":"MONDO:0019525","xrefs":{"Monarch":{"xref_id":"0019525"}}}


id: MONDO:0017970
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sex development due to impaired androgen production (obsolete MONDO:0017970)","secondary_identifiers":["Orphanet:325357"],"synonyms":[{"name":"46,XY DSD due to impaired androgen production","type":"exact"}],"termid":"MONDO:0017970","xrefs":{"Monarch":{"xref_id":"0017970"}}}


id: GO:0002703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"regulates","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte mediated immunity","synonyms":[{"name":"regulation of immune cell mediated immunity","type":"exact"},{"name":"regulation of leucocyte mediated immunity","type":"exact"}],"termid":"GO:0002703"}


id: GO:0098826
data:
  {"annotated_genes":["SJAG_00053","SJAG_01848","SJAG_01460","SJAG_03170","SJAG_03795","SJAG_03812"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64780,109008,118987,119868],"is_not":false,"summary":null,"term":"GO:0098826"},{"annotations":[104714,90729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160219"}]},"cv_name":"cellular_component","definition":"The membrane of the endoplasmic reticulum tubular network.","definition_xrefs":["PMID:16469703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"},{"relation_name":"part_of","term_name":"endoplasmic reticulum tubular network","termid":"GO:0071782"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01460":null,"SJAG_01848":null,"SJAG_03170":null,"SJAG_03795":null,"SJAG_03812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005789","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"endoplasmic reticulum tubular network membrane","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21802294":null},"termid":"GO:0098826","terms_by_termid":{"GO:0098826":null,"GO:0160219":null}}


id: FYPO:0001319
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119940,119941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[119933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"},{"annotations":[119817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"},{"annotations":[119754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000644"},{"annotations":[119931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000596"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific cellular process is normal (i.e. indistinguishable from wild type) in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"},{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"},{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null,"SJAG_04883":null},"genotype_count":5,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild type"}]}]},"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_03118","SJAG_02621"],"name":"normal cellular process during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:35226668":null,"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_04883","SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta","mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","ptp4delta"],"synonyms":[{"name":"normal cellular process during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001319","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000596":null,"FYPO:0000644":null,"FYPO:0001007":null,"FYPO:0006989":null,"FYPO_EXT:0000001":null}}


id: PBO:0039235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminolevulinate dehydratase","termid":"PBO:0039235"}


id: GO:1905273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proton-transporting ATP synthase activity, rotational mechanism.","definition_xrefs":["GOC:als","PMID:21106936","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ligase activity","termid":"GO:0051351"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of proton-transporting ATP synthase activity, rotational mechanism","synonyms":[{"name":"activation of H+-transporting ATP synthase activity","type":"narrow"},{"name":"activation of hydrogen ion translocating F-type ATPase activity","type":"narrow"},{"name":"activation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"narrow"},{"name":"activation of hydrogen ion transporting two-sector ATPase activity","type":"narrow"},{"name":"activation of proton-transporting ATP synthase activity, rotational mechanism","type":"narrow"},{"name":"positive regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"positive regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"positive regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"positive regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"up regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"up regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"up regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"up regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"up regulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"up-regulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"up-regulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"up-regulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"up-regulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"up-regulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"upregulation of H+-transporting ATP synthase activity","type":"exact"},{"name":"upregulation of hydrogen ion translocating F-type ATPase activity","type":"exact"},{"name":"upregulation of hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"upregulation of hydrogen ion transporting two-sector ATPase activity","type":"exact"},{"name":"upregulation of proton-transporting ATP synthase activity, rotational mechanism","type":"exact"}],"termid":"GO:1905273"}


id: GO:0106348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a adenosine in U2 snRNA + S-adenosyl-L-methionine = an N6-methyl-adenosine in U2 snRNA + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:32637152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA methyltransferase activity","termid":"GO:0106346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0140098","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"U2 snRNA adenosine m6 methyltransferase activity","termid":"GO:0106348"}


id: FYPO:0007343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of lipid droplet formation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished lipid droplet formation","synonyms":[{"name":"abolished lipid droplet assembly","type":"exact"},{"name":"abolished lipid particle formation","type":"exact"},{"name":"lipid droplet formation abolished","type":"exact"}],"termid":"FYPO:0007343"}


id: PBO:0042282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD1b molecule","termid":"PBO:0042282"}


id: PBO:0074333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1","termid":"PBO:0074333"}


id: PBO:0082592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Citrate and oxoglutarate carrier protein; exports citrate from and imports oxoglutarate into the mitochondrion, causing net export of NADPH reducing equivalents; also associates with mt nucleoids and has a role in replication and segregation of the mt genome","termid":"PBO:0082592"}


id: MONDO:0013387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"KCNQ2-related epileptic encephalopathy is a severe form of neonatal epilepsy that usually manifests in newborns during the first week of life with seizures (that affect alternatively both sides of the body), often accompanied by clonic jerking or more complex motor behavior, as well as signs of encephalopathy such as diffuse hypotonia, limb spasticity, lack of visual fixation and tracking and mild to moderate intellectual deficiency. The severity can range from controlled to intractable seizures and mild/moderate to severe intellectual disability.","definition_xrefs":["Orphanet:439218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 7","secondary_identifiers":["GARD:13060","MEDGEN:462336","DOID:0080462","UMLS:C3150986","OMIM:613720"],"synonyms":[{"name":"DEE7","type":"exact"},{"name":"EIEE7","type":"exact"},{"name":"KCNQ2-NEE","type":"exact"},{"name":"KCNQ2-related disorders","type":"related"},{"name":"KCNQ2-related epileptic encephalopathy","type":"exact"},{"name":"KCNQ2-related neonatal epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 7","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 7","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 7","type":"exact"}],"termid":"MONDO:0013387","xrefs":{"Monarch":{"xref_id":"0013387"}}}


id: GO:0004809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + tRNA containing guanine = S-adenosyl-L-homocysteine + tRNA containing N2-methylguanine.","definition_xrefs":["EC:2.1.1.32"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA (guanine-N2-)-methyltransferase activity (obsolete GO:0004809)","synonyms":[{"name":"N(2),N(2)-dimethylguanine tRNA methyltransferase activity","type":"related"},{"name":"N2,N2-dimethylguanine tRNA methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:tRNA (guanine-2-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:tRNA (guanine-N2-)-methyltransferase activity","type":"related"},{"name":"guanine-N2-methylase activity","type":"related"},{"name":"transfer ribonucleate guanine 2-methyltransferase activity","type":"related"},{"name":"transfer ribonucleate guanine N2-methyltransferase activity","type":"related"}],"termid":"GO:0004809"}


id: PR:Q09791
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13G6.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G6.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.15c","synonyms":[{"name":"Spom972h-SPAC13G6.15c","type":"exact"}],"termid":"PR:Q09791"}


id: GO:0140473
data:
  {"annotated_genes":["SJAG_01263","SJAG_05226"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106323,117952],"is_not":false,"summary":null,"term":"GO:0140473"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together the telomeric region of a chromosome and the inner nuclear membrane by interacting with both the telomere and the nuclear membrane, in order to establish and maintain the telomeric location.","definition_xrefs":["PMID:31635174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01263":null,"SJAG_05226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"telomere-nuclear envelope anchor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear envelope-telomere anchor activity","type":"exact"},{"name":"telomere-nuclear envelope anchoring activity","type":"exact"}],"termid":"GO:0140473","terms_by_termid":{"GO:0140473":null}}


id: PBO:0051506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IKBKB divergent transcript","termid":"PBO:0051506"}


id: GO:0034423
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the autophagosome double-membrane.","definition_xrefs":["GOC:autophagy","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"part_of","term_name":"autophagosome","termid":"GO:0005776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"autophagosome lumen","synonyms":[{"name":"autophagic vacuole lumen","type":"exact"}],"termid":"GO:0034423"}


id: FYPO:0000817
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of a peptide pheromone released into the growth medium by cells is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased concentration of substance in growth medium","termid":"FYPO:0000800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001155"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001155","FYPO:0001985"],"is_obsolete":false,"name":"increased concentration of pheromone in growth medium","synonyms":[{"name":"increased accumulation of pheromone in growth medium","type":"related"},{"name":"increased concentration of peptide pheromone in growth medium","type":"exact"},{"name":"increased level of pheromone in growth medium","type":"exact"},{"name":"increased release of pheromone into growth medium","type":"related"},{"name":"pheromone production: increased","type":"related"}],"termid":"FYPO:0000817"}


id: GO:0150201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transport across blood-brain barrier.","definition_xrefs":["GOC:bc","PMID:29377008","GOC:aruk","PMID:30280653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of transport across blood-brain barrier","termid":"GO:0150200"},{"relation_name":"part_of","term_name":"positive regulation of vascular permeability","termid":"GO:0043117"},{"relation_name":"positively_regulates","term_name":"transport across blood-brain barrier","termid":"GO:0150104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of transport across blood-brain barrier","termid":"GO:0150201"}


id: PBO:0027734
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_cell_cycle_arrest_with_unreplicated_DNA","termid":"PBO:0027734"}


id: PBO:0040353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 2","termid":"PBO:0040353"}


id: FYECO:0000025
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sorbitol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ sorbitol","termid":"FYECO:0000025"}


id: PBO:0062633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily I member 1 pseudogene","termid":"PBO:0062633"}


id: MONDO:0021027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of hair anomaly that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic hair anomaly (obsolete MONDO:0021027)","secondary_identifiers":["Orphanet:183450"],"synonyms":[{"name":"genetic hair anomaly","type":"exact"}],"termid":"MONDO:0021027","xrefs":{"Monarch":{"xref_id":"0021027"}}}


id: PBO:0061004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS antisense RNA 1","termid":"PBO:0061004"}


id: GO:0021952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a CNS neuron, that carries efferent (outgoing) action potentials from the cell body towards target cells in a different central nervous system region.","definition_xrefs":["GOC:dph","GOC:dgh","GO_REF:0000021","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron axonogenesis","termid":"GO:0021955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system projection neuron axonogenesis","synonyms":[{"name":"central nervous system axon tract development","type":"narrow"}],"termid":"GO:0021952"}


id: PBO:0016114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule regulator Mtr1","termid":"PBO:0016114"}


id: MONDO:1012077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"faded shaker, non-human animal","termid":"MONDO:1011841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faded shaker, chicken","secondary_identifiers":["OMIA:000365-9031"],"termid":"MONDO:1012077","xrefs":{"Monarch":{"xref_id":"1012077"}}}


id: PR:O94640
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sir2 gene.","definition_xrefs":["UniProtKB:O94640","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent histone deacetylase sir2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.07c","synonyms":[{"name":"Spom972h-sir2","type":"exact"},{"name":"regulatory protein sir2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"silent information regulator 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94640"}


id: PBO:0091744
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously assigned incorrectly as can1","termid":"PBO:0091744"}


id: GO:0021924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts resulting in the expansion of a cell population in the external granule layer of the hindbrain. The external granule layer is the layer that originates from the rostral half of the rhombic lip in the first rhombomere.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh","PMID:15157725","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain","termid":"GO:0021534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in external granule layer","termid":"GO:0021924"}


id: PBO:0049323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2A1 antisense RNA 1","termid":"PBO:0049323"}


id: PBO:0074790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 11","termid":"PBO:0074790"}


id: GO:0060880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a semicircular canal epithelial cell acquires the structural features that allow it to contribute to the process of semicircular canal fusion.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"semicircular canal fusion","termid":"GO:0060879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell morphogenesis involved in semicircular canal fusion","termid":"GO:0060880"}


id: GO:0008180
data:
  {"annotated_genes":["SJAG_02764","SJAG_04011","SJAG_03325","SJAG_03733","SJAG_00720","SJAG_00662","SJAG_04948"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64000,72398,76642,80736,93213,93335,100437],"is_not":false,"summary":null,"term":"GO:0008180"}]},"cv_name":"cellular_component","definition":"A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome.","definition_xrefs":["PMID:11019806","PMID:14570571","PMID:12186635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00662":null,"SJAG_00720":null,"SJAG_02764":null,"SJAG_03325":null,"SJAG_03733":null,"SJAG_04011":null,"SJAG_04948":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"COP9 signalosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"COP9 complex","type":"exact"},{"name":"CSN","type":"exact"},{"name":"signalosome","type":"broad"}],"termid":"GO:0008180","terms_by_termid":{"GO:0008180":null}}


id: PBO:0071681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 13","termid":"PBO:0071681"}


id: MONDO:0015413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Median cleft of the upper lip and maxilla is a rare, congenital, developmental defect during embryogenesis characterized by a midline vertical cleft through the upper lip and premaillary bone (can also involve the nasal septum and central nervous system). The phenotypic spectrum is highly variable (ranging from a simple vermillion notch to a wide complete cleft) and hypo/hypertelorism, telecanthus, monophthalmia, flat or cleft nose, wide columella, median alveolar cleft and cranial malformations may be associated.","definition_xrefs":["Orphanet:141239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial cleft","termid":"MONDO:0015411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"median cleft of the upper lip and maxilla","secondary_identifiers":["UMLS:C3697381","MEDGEN:784645","GARD:19966"],"termid":"MONDO:0015413","xrefs":{"Monarch":{"xref_id":"0015413"}}}


id: MONDO:0014355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited odontologic disease (obsolete MONDO:0019183)","termid":"MONDO:0019183"},{"relation_name":"is_a","term_name":"arrhythmogenic cardiomyopathy with wooly hair and keratoderma","termid":"MONDO:0011581"},{"relation_name":"is_a","term_name":"erythrokeratoderma","termid":"MONDO:0019270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cardiomyopathy, dilated, with wooly hair, keratoderma, and tooth agenesis","secondary_identifiers":["GARD:16014","MEDGEN:862830","Orphanet:476096","OMIM:615821","UMLS:C4014393"],"synonyms":[{"name":"DCWHKTA","type":"related"},{"name":"EKC syndrome","type":"exact"},{"name":"cardiomyopathy, dilated, with wooly hair, keratoderma, and tooth agenesis","type":"exact"},{"name":"dilated cardiomyopathy with woolly hair, keratoderma, and tooth agenesis","type":"exact"},{"name":"dilated cardiomyopathy with wooly hair, keratoderma, and tooth agenesis","type":"exact"},{"name":"erythrokeratodermia-cardiomyopathy syndrome","type":"exact"}],"termid":"MONDO:0014355","xrefs":{"Monarch":{"xref_id":"0014355"}}}


id: PBO:0070630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 1","termid":"PBO:0070630"}


id: PBO:0077695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNK2 antisense RNA 1","termid":"PBO:0077695"}


id: FYPO:0003383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tert-butyl hydroperoxide (TBHP or t-BOOH) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to tert-butyl hydroperoxide","synonyms":[{"name":"resistance to 2-methyl-prop-2-yl-hydroperoxide","type":"exact"},{"name":"resistance to TBHP","type":"exact"},{"name":"resistance to t-BOOH","type":"exact"},{"name":"resistance to tert-butyl hydroperoxide during mitotic cell cycle","type":"related"},{"name":"resistance to tert-butyl hydroperoxide during vegetative growth","type":"exact"},{"name":"resistant to tert-butyl hydroperoxide","type":"exact"}],"termid":"FYPO:0003383"}


id: GO:0160248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine(27) in tRNA + 2 S-adenosyl-L-methionine = 2 H+ + N(2)-dimethylguanosine(27) in tRNA + 2 S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:39786990","PMID:39786998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140101","GO:0016740","GO:0003824","GO:0003674","GO:0140098","GO:0016741"],"is_obsolete":false,"name":"tRNA (guanine(27)-N2)-dimethyltransferase activity","termid":"GO:0160248"}


id: PBO:0084908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitofusin, protein involved in mitochondrial outer membrane fusion; role in mitochondrial genome maintenance; efficient tethering and degradation of Fzo1p requires an intact N-terminal GTPase domain; targeted for destruction by the ubiquitin ligase SCF-Mdm30p and the cytosolic ubiquitin-proteasome system; activity regulated by ubiquitylation at conserved lysine residues and by  deubiquitylases Ubp2p and Ubp12p","termid":"PBO:0084908"}


id: MONDO:0004483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland adenoma composed of large cells with abundant granular eosinophilic cytoplasm and large nuclei with prominent nucleoli.","definition_xrefs":["NCIT:C6042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oncocytic adenoma","termid":"MONDO:0003424"},{"relation_name":"is_a","term_name":"follicular thyroid adenoma","termid":"MONDO:0005032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid gland oncocytic adenoma","secondary_identifiers":["ONCOTREE:OAT","MEDGEN:237009","UMLS:C1336750","DOID:8162"],"synonyms":[{"name":"Hurthle cell adenoma","type":"related"},{"name":"Hurthle cell adenoma of the thyroid","type":"related"},{"name":"Hurthle cell adenoma of the thyroid gland","type":"related"},{"name":"Hurthle cell adenoma of thyroid","type":"related"},{"name":"Hurthle cell adenoma of thyroid gland","type":"related"},{"name":"OAT","type":"broad"},{"name":"benign oncocytoma of the thyroid","type":"exact"},{"name":"benign oncocytoma of the thyroid gland","type":"related"},{"name":"benign oncocytoma of thyroid","type":"related"},{"name":"benign oncocytoma of thyroid gland","type":"related"},{"name":"benign thyroid gland oncocytoma","type":"related"},{"name":"benign thyroid oncocytoma","type":"related"},{"name":"follicular adenoma of the thyroid gland of the oxyphilic cell type","type":"related"},{"name":"follicular adenoma of the thyroid of the oxyphilic cell type","type":"related"},{"name":"follicular adenoma of thyroid gland of oxyphilic cell type","type":"related"},{"name":"follicular adenoma of thyroid of oxyphilic cell type","type":"related"},{"name":"oncocytic adenoma of the thyroid","type":"related"},{"name":"oncocytic adenoma of the thyroid gland","type":"related"},{"name":"oncocytic adenoma of thyroid","type":"related"},{"name":"oncocytic adenoma of thyroid gland","type":"related"},{"name":"thyroid Hurthle cell adenoma","type":"related"},{"name":"thyroid follicular adenoma of oxyphilic cell type","type":"related"},{"name":"thyroid follicular adenoma of the oxyphilic cell type","type":"related"},{"name":"thyroid gland Hurthle cell adenoma","type":"related"},{"name":"thyroid gland follicular adenoma of oxyphilic cell type","type":"related"},{"name":"thyroid gland follicular adenoma of the oxyphilic cell type","type":"related"},{"name":"thyroid gland oncocytic adenoma","type":"exact"},{"name":"thyroid oncocytic adenoma","type":"related"}],"termid":"MONDO:0004483","xrefs":{"Monarch":{"xref_id":"0004483"}}}


id: PBO:0085189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of two type I myosin motors; contains proline-rich tail homology 2 (TH2) and SH3 domains; MYO5 deletion has little effect on growth, but myo3 myo5 double deletion causes severe defects in growth and actin cytoskeleton organization; MYO5 has a paralog, MYO3, that arose from the whole genome duplication","termid":"PBO:0085189"}


id: GO:0042044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances that are in liquid form in normal living conditions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"fluid transport","termid":"GO:0042044"}


id: PBO:0016884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein","termid":"PBO:0016884"}


id: PBO:0058171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4466","termid":"PBO:0058171"}


id: MONDO:0002800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the veins associated with the presence of a thrombus.","definition_xrefs":["NCIT:C3410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phlebitis","termid":"MONDO:0004625"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombophlebitis","secondary_identifiers":["MESH:D013924","ICD9:451.0","SCTID:40283005","DOID:3875","ICD10CM:I80.0","ICD9:451.2","MEDGEN:11799","UMLS:C0040046"],"synonyms":[{"name":"phlebitis and thrombophlebitis of superficial vessels of lower extremities","type":"exact"},{"name":"superficial thrombophlebitis of leg","type":"exact"},{"name":"thrombophlebitis of a superficial leg vein","type":"exact"},{"name":"thrombophlebitis of superficial veins of lower extremity","type":"exact"}],"termid":"MONDO:0002800","xrefs":{"Monarch":{"xref_id":"0002800"}}}


id: PBO:0051156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-36 (pseudogene)","termid":"PBO:0051156"}


id: MONDO:1011878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensory ataxic neuropathy, non-human animal","secondary_identifiers":["OMIA:001467"],"termid":"MONDO:1011878","xrefs":{"Monarch":{"xref_id":"1011878"}}}


id: GO:1905235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a quercetin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:24914722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to flavonoid","termid":"GO:1905395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to quercetin","termid":"GO:1905235"}


id: PBO:0043429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 1","termid":"PBO:0043429"}


id: GO:0005148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prolactin receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"prolactin receptor binding","synonyms":[{"name":"prolactin","type":"narrow"},{"name":"prolactin receptor ligand","type":"narrow"}],"termid":"GO:0005148"}


id: PBO:0070262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U12 small nuclear","termid":"PBO:0070262"}


id: MONDO:0010585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked form of ectodermal dysplasia which results from mutations of the gene encoding ectodysplasin.","definition_xrefs":["MESH:D053358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"hypohidrotic ectodermal dysplasia","termid":"MONDO:0016535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"X-linked hypohidrotic ectodermal dysplasia","secondary_identifiers":["Orphanet:181","GARD:10427","icd11.foundation:941793098","UMLS:C0162359","MEDGEN:57890","DOID:0111664","SCTID:239007005","OMIM:305100"],"synonyms":[{"name":"CST syndrome","type":"related"},{"name":"Christ-Siemens-Touraine syndrome","type":"exact"},{"name":"Eda1","type":"related"},{"name":"X-linked anhidrotic ectodermal dysplasia","type":"exact"},{"name":"X-linked hypohidrotic ectodermal dysplasia","type":"exact"},{"name":"XHED","type":"exact"},{"name":"Xlhed","type":"related"},{"name":"anhidrotic ectodermal dysplasia X-linked","type":"related"},{"name":"ectodermal dysplasia 1","type":"related"},{"name":"ectodermal dysplasia 1, hypohidrotic, X-linked","type":"related"},{"name":"ectodermal dysplasia 1, hypohidrotic, X-linked, X-linked recessive","type":"exact"},{"name":"ectodermal dysplasia 1, hypohidrotic/hair/Tooth type, X-linked","type":"related"},{"name":"ectodermal dysplasia, anhidrotic, X-linked","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic, 1","type":"related"},{"name":"hypohidrotic ectodermal dysplasia X-linked","type":"related"},{"name":"hypohidrotic ectodermal dysplasia, X-linked","type":"exact"}],"termid":"MONDO:0010585","xrefs":{"Monarch":{"xref_id":"0010585"}}}


id: PBO:0004101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAF1 family ribonuclease (predicted)","termid":"PBO:0004101"}


id: GO:1901640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to XTP.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide binding","termid":"GO:0032555"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate binding","termid":"GO:0035639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"XTP binding","termid":"GO:1901640"}


id: PBO:0057623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1193","termid":"PBO:0057623"}


id: MONDO:0010692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear ribonucleic acid","secondary_identifiers":["OMIM:310650","UMLS:C1839581","MEDGEN:374259"],"synonyms":[{"name":"nRNA","type":"related"},{"name":"nuclear ribonucleic acid","type":"exact"}],"termid":"MONDO:0010692","xrefs":{"Monarch":{"xref_id":"0010692"}}}


id: MONDO:0044638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the hypopharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharyngeal squamous cell carcinoma","termid":"MONDO:0000536"},{"relation_name":"is_a","term_name":"hypopharyngeal carcinoma","termid":"MONDO:0005216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"hypopharynx squamous cell carcinoma","secondary_identifiers":["EFO:1001960","ONCOTREE:HPHSC","UMLS:C0280321","icd11.foundation:680629191","Orphanet:494547","GARD:17907","MEDGEN:79102","NCIT:C4043"],"synonyms":[{"name":"epidermoid carcinoma of hypopharynx","type":"exact"},{"name":"epidermoid carcinoma of the hypopharynx","type":"exact"},{"name":"hypopharyngeal epidermoid carcinoma","type":"exact"},{"name":"hypopharyngeal squamous cell carcinoma","type":"exact"},{"name":"hypopharyngeal throat squamous cell cancer","type":"exact"},{"name":"squamous cell carcinoma of hypopharynx","type":"exact"},{"name":"squamous cell carcinoma of the hypopharynx","type":"related"}],"termid":"MONDO:0044638","xrefs":{"Monarch":{"xref_id":"0044638"}}}


id: MONDO:1010504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Endocardial fibroelastosis that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial fibroelastosis, non-human animal","termid":"MONDO:1010027"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocardial fibroelastosis, domestic cat","secondary_identifiers":["OMIA:001803-9685"],"termid":"MONDO:1010504","xrefs":{"Monarch":{"xref_id":"1010504"}}}


id: GO:0010039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to iron ion","synonyms":[{"name":"response to iron","type":"exact"}],"termid":"GO:0010039"}


id: PBO:0043226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLCA4 antisense RNA 1","termid":"PBO:0043226"}


id: PBO:0074241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 52 member 1","termid":"PBO:0074241"}


id: PBO:0076945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transferrin receptor","termid":"PBO:0076945"}


id: GO:0070249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of natural killer cell death by apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte apoptotic process","termid":"GO:0070230"},{"relation_name":"is_a","term_name":"regulation of natural killer cell apoptotic process","termid":"GO:0070247"},{"relation_name":"positively_regulates","term_name":"natural killer cell apoptotic process","termid":"GO:0070246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell apoptotic process","synonyms":[{"name":"activation of natural killer cell apoptosis","type":"narrow"},{"name":"positive regulation of NK cell apoptosis","type":"exact"},{"name":"positive regulation of natural killer cell apoptosis","type":"narrow"},{"name":"stimulation of natural killer cell apoptosis","type":"narrow"},{"name":"up regulation of natural killer cell apoptosis","type":"exact"},{"name":"up-regulation of natural killer cell apoptosis","type":"exact"},{"name":"upregulation of natural killer cell apoptosis","type":"exact"}],"termid":"GO:0070249"}


id: MONDO:0016539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of hypotonia-cystinuria syndrome characterized by mild to moderate intellectual disability in addition to classic hypotonia-cystinuria syndrome phenotype (cystinuria type 1, generalized hypotonia, poor feeding, growth retardation, and minor facial dysmorphism).","definition_xrefs":["Orphanet:238523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotonia-cystinuria syndrome","termid":"MONDO:0011669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"atypical hypotonia-cystinuria syndrome","secondary_identifiers":["GARD:17175","UMLS:C4755274","icd11.foundation:1982772708","MEDGEN:1668791"],"synonyms":[{"name":"atypical HCS","type":"exact"}],"termid":"MONDO:0016539","xrefs":{"Monarch":{"xref_id":"0016539"}}}


id: PR:Q10262
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug115 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 115 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.14c","synonyms":[{"name":"Spom972h-mug115","type":"exact"}],"termid":"PR:Q10262"}


id: PBO:0059312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L52","termid":"PBO:0059312"}


id: GO:0140934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A deubiquitinase that cleaves ubiquitin from a histone protein to which it is conjugated.","definition_xrefs":["PMID:18226187","PMID:18206972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0003824","GO:0008233","GO:0003674","GO:0140096","GO:0016787"],"is_obsolete":false,"name":"histone deubiquitinase activity","synonyms":[{"name":"histone deubiquitination","type":"related"}],"termid":"GO:0140934"}


id: FYPO:0002377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable and has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"has_part","term_name":"viable vegetative cell","termid":"FYPO:0001491"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"viable swollen vegetative cell","synonyms":[{"name":"viable enlarged vegetative cell","type":"related"},{"name":"viable large vegetative cell","type":"related"},{"name":"viable swollen cell during vegetative growth","type":"exact"},{"name":"viable swollen vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable vegetative cell with increased cell size","type":"related"},{"name":"viable vegetative cell with increased cell volume","type":"exact"}],"termid":"FYPO:0002377"}


id: PBO:0002877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor Sec74 (predicted)","termid":"PBO:0002877"}


id: PBO:0083121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dolichol kinase; catalyzes the terminal step in dolichyl monophosphate (Dol-P) biosynthesis; required for viability and for normal rates of lipid intermediate synthesis and protein N-glycosylation","termid":"PBO:0083121"}


id: MONDO:0012650
data:
  {"annotated_genes":["SJAG_04199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87119],"is_not":false,"summary":null,"term":"MONDO:0012650"}]},"cv_name":"mondo","definition":"Cernunnos-XLF deficiency is a rare form of combined immunodeficiency characterized by microcephaly, growth retardation, and T and B cell lymphopenia.","definition_xrefs":["Orphanet:169079"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Cernunnos-XLF deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:720853005","UMLS:C1969799","GARD:17045","MESH:C566970","OMIM:611291","MEDGEN:369590"],"synonyms":[{"name":"Cernunnos XLFD","type":"exact"},{"name":"Cernunnos deficiency","type":"exact"},{"name":"Cernunnos-XLF deficiency","type":"exact"},{"name":"NHEJ1 deficiency","type":"exact"},{"name":"Nhej1 syndrome","type":"related"},{"name":"SCID, autosomal recessive, T cell-negative, B cell-negative, NK cell-positive, and sensitivity to ionising radiation due to Nhej1 deficiency","type":"related"},{"name":"SCID, autosomal recessive, T cell-negative, B cell-negative, NK cell-positive, and sensitivity to ionizing radiation due to Nhej1 deficiency","type":"related"},{"name":"SCID, autosomal recessive, T cell-negative, B cell-negative, NK cell-positive, with microcephaly, Growth retardation, and sensitivity to ionising radiation","type":"related"},{"name":"SCID, autosomal recessive, T cell-negative, B cell-negative, NK cell-positive, with microcephaly, Growth retardation, and sensitivity to ionizing radiation","type":"related"},{"name":"combined immunodeficiency-microcephaly-growth retardation-sensitivity to ionising radiation syndrome","type":"exact"},{"name":"combined immunodeficiency-microcephaly-growth retardation-sensitivity to ionizing radiation syndrome","type":"exact"},{"name":"severe combined immunodeficiency with microcephaly, growth retardation, and sensitivity to ionising radiation","type":"related"},{"name":"severe combined immunodeficiency with microcephaly, growth retardation, and sensitivity to ionizing radiation","type":"related"},{"name":"severe combined immunodeficiency with sensitivity to ionising radiation due to Nhej1 deficiency","type":"related"},{"name":"severe combined immunodeficiency with sensitivity to ionizing radiation due to Nhej1 deficiency","type":"related"}],"termid":"MONDO:0012650","terms_by_termid":{"MONDO:0012650":null},"xrefs":{"Monarch":{"xref_id":"0012650"}}}


id: GO:0003300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of the heart muscle due to an increase in size of cardiac muscle cells without cell division.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle hypertrophy","termid":"GO:0014897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle hypertrophy","termid":"GO:0003300"}


id: GO:0180038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin L and cyclin-dependent kinase 11 (CDK11). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["PMID:23122962","PMID:32446654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin L-CDK11 complex","synonyms":[{"name":"Cdk11-Cyclin L complex","type":"exact"}],"termid":"GO:0180038"}


id: MONDO:1010618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly, non-human animal","termid":"MONDO:1010066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, sheep","secondary_identifiers":["OMIA:000645-9940"],"termid":"MONDO:1010618","xrefs":{"Monarch":{"xref_id":"1010618"}}}


id: PBO:0071188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 29","termid":"PBO:0071188"}


id: GO:0019050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a virus gene product suppresses host apoptosis, leading to a decrease in the frequency, rate or extent of apoptosis in the host cell.","definition_xrefs":["GOC:mtg_apoptosis","ISBN:0781718325"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host apoptotic process (obsolete GO:0019050)","synonyms":[{"name":"inhibition of host caspases by virus","type":"narrow"},{"name":"negative regulation by virus of host apoptosis","type":"exact"},{"name":"negative regulation of apoptosis by virus","type":"exact"},{"name":"suppression by virus of host apoptosis","type":"exact"},{"name":"suppression by virus of host cysteine-type endopeptidase activity involved in apoptotic process","type":"narrow"},{"name":"suppression of apoptosis in host by virus","type":"exact"}],"termid":"GO:0019050"}


id: MONDO:0019885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 11q is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the long arm of chromosome 11, with high phenotypic variability principally characterized by craniofacial dysmorphism (brachycephaly/plagiocephaly, low-set, posteriorly rotated ears, short philtrum, micrognathia) and intellectual disability. Short stature and seizures, as well as cardiac (e.g. atrial septal defect), skeletal (incl. brachy/syndactyly) and genital (e.g. micropenis, cryptorchidism) abnormalities may also be associated. Neurodevelopmental anomalies (pain insensitivity, sensorineural hearing loss, expressive language deficiency) and neuropsychiatric disorders (autistic features, auditory hallucination, self-talking) have also been reported.","definition_xrefs":["Orphanet:96103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 11q trisomy","termid":"MONDO:0022173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 11q","secondary_identifiers":["GARD:19318","MESH:C538294","UMLS:C2931797","MEDGEN:419166","NORD:937","SCTID:764447009"],"synonyms":[{"name":"Chromosome 11, Partial Trisomy 11q","type":"exact"},{"name":"distal duplication 11q","type":"exact"},{"name":"distal trisomy type 11q","type":"exact"},{"name":"telomeric duplication 11q","type":"exact"},{"name":"trisomy 11qter","type":"exact"}],"termid":"MONDO:0019885","xrefs":{"Monarch":{"xref_id":"0019885"}}}


id: GO:0071093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha5-beta1 integrin complex bound to fibronectin and tissue transglutaminase.","definition_xrefs":["PMID:10684262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha5-beta1 integrin-fibronectin-tissue transglutaminase complex","synonyms":[{"name":"ITGA5-ITGB1-FN1-TGM2 complex","type":"narrow"}],"termid":"GO:0071093"}


id: GO:0043198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cylindric portion of the dendrite, directly stemming from the perikaryon, and carrying the dendritic spines.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic shaft","secondary_identifiers":["NIF_Subcellular:sao2034472720"],"synonyms":[{"name":"trunk","type":"related"}],"termid":"GO:0043198"}


id: GO:0016943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule catalyzed by RNA polymerase I following transcription initiation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase I transcription elongation factor activity (obsolete GO:0016943)","synonyms":[{"name":"Pol I transcription elongation factor activity","type":"exact"},{"name":"RNA polymerase I transcription elongation factor activity","type":"exact"}],"termid":"GO:0016943"}


id: PR:O94325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal targeting signal 1 receptor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10130:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal targeting signal receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.07","secondary_identifiers":["UniProtKB:O94325"],"synonyms":[{"name":"PTS1 receptor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PTS1R (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC725.07","type":"related"},{"name":"Spom972h-PEX5","type":"exact"},{"name":"peroxin-5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94325"}


id: PBO:0089164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-formyltetrahydrofolate cyclo-ligase Fau1","termid":"PBO:0089164"}


id: GO:1905073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tight junction disassembly.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:rl","PMID:18718461","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"tight junction disassembly","termid":"GO:1905071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tight junction disassembly","synonyms":[{"name":"regulation of occluding cell junction disassembly","type":"exact"},{"name":"regulation of occluding junction disassembly","type":"exact"}],"termid":"GO:1905073"}


id: FYPO:0002111
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and tapers at one end to a diameter smaller than the other. The cell diameter at the narrow end is smaller than that of a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable tapered cell","termid":"FYPO:0002109"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell shape","termid":"FYPO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"inviable tapered vegetative cell","synonyms":[{"name":"inviable bottle-shaped vegetative cell","type":"exact"},{"name":"inviable bottle-shaped vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable bottle/skittle vegetative cell","type":"exact"},{"name":"inviable skittle-shaped vegetative cell","type":"exact"},{"name":"inviable tapered cell during vegetative growth","type":"exact"},{"name":"lethal; tapered vegetative cell","type":"exact"}],"termid":"FYPO:0002111"}


id: GO:0072538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response which is associated with resistance to intracellular bacteria with a key role in inflammation and tissue injury. This immune response is associated with pathological autoimmune conditions such as multiple sclerosis, arthritis and psoriasis which is typically orchestrated by the production of particular cytokines by T-helper 17 cells, most notably interleukin-17, IL-21 and IL-22.","definition_xrefs":["GOC:ebc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 17 type immune response","synonyms":[{"name":"Th17 immune response","type":"exact"}],"termid":"GO:0072538"}


id: MONDO:0019510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant medullary cystic kidney disease without hyperuricemia (obsolete MONDO:0019510)","termid":"MONDO:0019510","xrefs":{"Monarch":{"xref_id":"0019510"}}}


id: GO:1903290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of ATP catabolic process.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:10636900","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ATP catabolic process (obsolete GO:1903290)","synonyms":[{"name":"down regulation of ATP breakdown","type":"exact"},{"name":"down regulation of ATP catabolic process","type":"exact"},{"name":"down regulation of ATP catabolism","type":"exact"},{"name":"down regulation of ATP degradation","type":"exact"},{"name":"down regulation of ATP hydrolysis","type":"narrow"},{"name":"down-regulation of ATP breakdown","type":"exact"},{"name":"down-regulation of ATP catabolic process","type":"exact"},{"name":"down-regulation of ATP catabolism","type":"exact"},{"name":"down-regulation of ATP degradation","type":"exact"},{"name":"down-regulation of ATP hydrolysis","type":"narrow"},{"name":"downregulation of ATP breakdown","type":"exact"},{"name":"downregulation of ATP catabolic process","type":"exact"},{"name":"downregulation of ATP catabolism","type":"exact"},{"name":"downregulation of ATP degradation","type":"exact"},{"name":"downregulation of ATP hydrolysis","type":"narrow"},{"name":"inhibition of ATP breakdown","type":"narrow"},{"name":"inhibition of ATP catabolic process","type":"narrow"},{"name":"inhibition of ATP catabolism","type":"narrow"},{"name":"inhibition of ATP degradation","type":"narrow"},{"name":"inhibition of ATP hydrolysis","type":"narrow"},{"name":"negative regulation of ATP breakdown","type":"exact"},{"name":"negative regulation of ATP catabolism","type":"exact"},{"name":"negative regulation of ATP degradation","type":"exact"},{"name":"negative regulation of ATP hydrolysis","type":"narrow"}],"termid":"GO:1903290"}


id: MONDO:0022236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Colpocephaly is a congenital brain abnormality in which the occipital horns - the posterior or rear portion of the lateral ventricles (cavities) of the brain - are larger than normal because white matter in the posterior cerebrum has failed to develop or thicken.","definition_xrefs":["GARD:0010008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colpocephaly","secondary_identifiers":["UMLS:C0431384","MESH:C535973","MONDO:0022808","MEDGEN:98131","SCTID:253160006","icd11.foundation:845275248"],"termid":"MONDO:0022236","xrefs":{"Monarch":{"xref_id":"0022236"}}}


id: MONDO:0045015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that has its basis in the disruption of carbohydrate transport.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolism disease","termid":"MONDO:0037792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"carbohydrate transport disease","secondary_identifiers":["MEDGEN:541226","UMLS:C0268173","SCTID:54905006"],"synonyms":[{"name":"carbohydrate transport disease","type":"exact"},{"name":"disorder of carbohydrate transport","type":"exact"}],"termid":"MONDO:0045015","xrefs":{"Monarch":{"xref_id":"0045015"}}}


id: PBO:0061782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OCIA domain containing 2 pseudogene 1","termid":"PBO:0061782"}


id: MONDO:1011473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amyloidosis that occurs in Japanese quail.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"amyloidosis, non-human animal","termid":"MONDO:1011415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloidosis, Japanese quail","secondary_identifiers":["OMIA:000037-93934"],"termid":"MONDO:1011473","xrefs":{"Monarch":{"xref_id":"1011473"}}}


id: MONDO:0008369
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011422"}]},"cv_name":"mondo","definition":"Proximal renal tubular acidosis (pRTA) is a tubular kidney disease characterized by impaired ability of the proximal tubule to reabsorb bicarbonate from the glomerular filtrate leading to hyperchloremic metabolic acidosis.","definition_xrefs":["Orphanet:47159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular acidosis","termid":"MONDO:0001909"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005066"],"is_obsolete":false,"name":"proximal renal tubular acidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:82804","ICD9:588.89","OMIM:179830","SCTID:24790002","GARD:16644","MedDRA:10037080","UMLS:C0268435"],"synonyms":[{"name":"RTA, proximal type","type":"related"},{"name":"RTA, rate type","type":"related"},{"name":"Type 2 RTA","type":"exact"},{"name":"Type 2 renal tubular acidosis","type":"exact"},{"name":"pRTA","type":"exact"},{"name":"renal tubular acidosis 2","type":"related"},{"name":"renal tubular acidosis type 2","type":"exact"},{"name":"renal tubular acidosis, proximal","type":"related"}],"termid":"MONDO:0008369","terms_by_termid":{"MONDO:0011422":null},"xrefs":{"Monarch":{"xref_id":"0008369"}}}


id: PBO:0060548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)HX dehydratase","termid":"PBO:0060548"}


id: GO:0030706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which one relatively unspecialized immature cystocyte of the germ-line cyst in the germarium acquires the specialized features of an oocyte. An example of this process can be found in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oocyte differentiation","termid":"GO:0009994"},{"relation_name":"part_of","term_name":"germarium-derived egg chamber formation","termid":"GO:0007293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germarium-derived oocyte differentiation","synonyms":[{"name":"oocyte cell differentiation","type":"related"}],"termid":"GO:0030706"}


id: PBO:0058105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4320","termid":"PBO:0058105"}


id: MONDO:0014940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neurodegeneration with ataxia, dystonia, and gaze palsy, childhood-onset","secondary_identifiers":["UMLS:C4310693","MEDGEN:934660","DOID:0081364","OMIM:617145"],"synonyms":[{"name":"NADGP","type":"exact"},{"name":"neurodegeneration with ataxia, dystonia, and gaze palsy, childhood-onset","type":"exact"},{"name":"neurodegeneration with ataxia, dystonia, and gaze palsy, childhood-onset; NADGP","type":"exact"}],"termid":"MONDO:0014940","xrefs":{"Monarch":{"xref_id":"0014940"}}}


id: MONDO:0018317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"growth retardation-mild developmental delay-chronic hepatitis syndrome","secondary_identifiers":["UMLS:C4751595","GARD:21621","MEDGEN:1654119","Orphanet:391366"],"termid":"MONDO:0018317","xrefs":{"Monarch":{"xref_id":"0018317"}}}


id: GO:0062044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate, frequency or extent of cardiac epithelial to mesenchymal transition, a transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["PMID:20951801","GOC:rph","GOC:BFH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial to mesenchymal transition","termid":"GO:0010719"},{"relation_name":"is_a","term_name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"},{"relation_name":"negatively_regulates","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062044"}


id: MONDO:0006959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Schnitzler syndrome (obsolete MONDO:0006959)","termid":"MONDO:0006959","xrefs":{"Monarch":{"xref_id":"0006959"}}}


id: PBO:0113496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation elongation factor eIF-5A; required for translation of proteins containing polyproline stretches; structural homolog of bacterial EF-P; undergoes an essential hypusination modification; HYP2 has paralog ANB1 that arose from whole genome duplication; in humans EIF5A variants cause a disorder characterized by variable combinations of developmental delay, microcephaly, micrognathia and dysmorphism; human EIF5A complements inviability of yeast hyp2 anb1 double null mutant","termid":"PBO:0113496"}


id: PBO:0013125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Luc7","termid":"PBO:0013125"}


id: PR:P17610
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P17610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein ypt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.03","synonyms":[{"name":"RAB (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ypt3","type":"exact"}],"termid":"PR:P17610"}


id: PBO:0081175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger FYVE-type containing 21","termid":"PBO:0081175"}


id: PBO:0082422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional triacylglycerol lipase and LPE acyltransferase; major lipid particle-localized triacylglycerol (TAG) lipase; catalyzes acylation of lysophosphatidylethanolamine (LPE), a function which is essential for sporulation; protein level and stability of Tgl3p are markedly reduced in the absence of lipid droplets; required with Tgl4p for timely bud formation","termid":"PBO:0082422"}


id: PBO:0089626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger, CCCH-type","termid":"PBO:0089626"}


id: PBO:0004290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyisobutyryl-CoA hydrolase (predicted)","termid":"PBO:0004290"}


id: MONDO:0700101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer, non-human animal","termid":"MONDO:1011828"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carcinoma, non-human animal","termid":"MONDO:0700101","xrefs":{"Monarch":{"xref_id":"0700101"}}}


id: SO:0000245
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000245 mRNA_by_polyadenylation_status (obsolete SO:0000245)","termid":"SO:0000245"}


id: PBO:0055120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2539","termid":"PBO:0055120"}


id: GO:0000156
data:
  {"annotated_genes":["SJAG_00318","SJAG_02472"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69732,112865],"is_not":false,"summary":null,"term":"GO:0000156"}]},"cv_name":"molecular_function","definition":"Responds to a phosphorelay sensor to initiate a change in cell state or activity. The activity of the response regulator is regulated by transfer of a phosphate from a histidine residue in the sensor, to an aspartate residue in the response regulator. Many but not all response regulators act as transcriptional regulators to elicit a response.","definition_xrefs":["GOC:bf","PMID:10966457","PMID:11842140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular transducer activity","termid":"GO:0060089"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00318":null,"SJAG_02472":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"phosphorelay response regulator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"two-component response regulator activity","type":"narrow"}],"termid":"GO:0000156","terms_by_termid":{"GO:0000156":null}}


id: FYPO:0000519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of oxidative phosphorylation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular respiration","termid":"FYPO:0000342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased oxidative phosphorylation","synonyms":[{"name":"decreased oxidative phosphorylation during mitotic cell cycle","type":"related"},{"name":"decreased oxidative phosphorylation during vegetative growth","type":"exact"},{"name":"oxidative phosphorylation: decreased","type":"related"},{"name":"reduced oxidative phosphorylation","type":"exact"}],"termid":"FYPO:0000519"}


id: PBO:0034170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_transport_across","termid":"PBO:0034170"}


id: PBO:0079235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC9 divergent transcript","termid":"PBO:0079235"}


id: PBO:0056044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"listerin E3 ubiquitin protein ligase 1","termid":"PBO:0056044"}


id: GO:0043208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to glycosphingolipid, a compound with residues of sphingoid and at least one monosaccharide.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid binding","termid":"GO:0046625"},{"relation_name":"is_a","term_name":"glycolipid binding","termid":"GO:0051861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"glycosphingolipid binding","termid":"GO:0043208"}


id: PBO:0049695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan and proteoglycan link protein 1","termid":"PBO:0049695"}


id: MONDO:0024376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sleep disorder, initiating and maintaining sleep","secondary_identifiers":["MEDGEN:43897","UMLS:C0021603","SCTID:194437008"],"synonyms":[{"name":"disorders of initiating and maintaining sleep","type":"exact"}],"termid":"MONDO:0024376","xrefs":{"Monarch":{"xref_id":"0024376"}}}


id: PBO:0034316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sequentially_related_to","termid":"PBO:0034316"}


id: PBO:0078956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon ACT) 1-1","termid":"PBO:0078956"}


id: MOD:01817
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a 2'-oxo-L-tryptophan.","definition_xrefs":["PubMed:9461080","RESID:AA0543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidation of tryptophan to 2'-oxo-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"2'-oxo-L-tryptophan","type":"exact"},{"name":"2-azanyl-3-[(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"2-oxo-L-tryptophan","type":"exact"},{"name":"2-oxotryptophan","type":"exact"}],"termid":"MOD:01817"}


id: MOD:00759
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"fucosylated biantennary (-1 galactose) N4-glycosylated asparagine","synonyms":[{"name":"Fucosylated biantennary (-1 galactose)","type":"related"},{"name":"dHex(1)Hex(4)HexNAc(4)","type":"related"}],"termid":"MOD:00759"}


id: PBO:0063735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin 1","termid":"PBO:0063735"}


id: MONDO:0016570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary pulmonary lymphoma (PPL) is a rare lymphoma of the lung, defined as a clonal lymphoid proliferation affecting one or both lungs (parenchyma and/or bronchi) in a patient with no detectable extrapulmonary involvement at diagnosis or during the subsequent 3 months. PPL comprises low grade/indolent B cell PPL forms, the most frequent form represented by the marginal B-cell lymphoma of mucosa associated lymphoid tissue (MALT lymphoma) and other non-MALT low grade lymphomas; and more rarely high-grade B-cell PPL (including diffuse large B cell lymphoma) and lymphomatoid granulomatosis (LYG).","definition_xrefs":["Orphanet:2420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary organ-specific lymphoma","termid":"MONDO:0017207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"primary pulmonary lymphoma","secondary_identifiers":["MedDRA:10037418","GARD:18770","SCTID:718200007","MEDGEN:903876","icd11.foundation:1042489672","UMLS:C4273669"],"termid":"MONDO:0016570","xrefs":{"Monarch":{"xref_id":"0016570"}}}


id: MONDO:0957466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tuberculosis","termid":"MONDO:0018076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary tuberculosis of the digestive system","secondary_identifiers":["icd11.foundation:1873777499","MEDGEN:1843420","Orphanet:645859","UMLS:C5816702"],"termid":"MONDO:0957466","xrefs":{"Monarch":{"xref_id":"0957466"}}}


id: MONDO:0017605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ependymal tumor (obsolete MONDO:0017605)","termid":"MONDO:0017605","xrefs":{"Monarch":{"xref_id":"0017605"}}}


id: PBO:0059789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 15","termid":"PBO:0059789"}


id: PBO:0056273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 1B member 1","termid":"PBO:0056273"}


id: PR:Q9HGN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A syntaxin-6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03260","PRO:DNx","PANTHER:PTHR12380:SF10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-SNARE affecting a late Golgi compartment protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36B7.07","secondary_identifiers":["UniProtKB:Q9HGN3"],"synonyms":[{"name":"Spom972h-STX6","type":"exact"},{"name":"syntaxin tlg1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGN3"}


id: MONDO:0012208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratinopathic ichthyosis","termid":"MONDO:0017266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"congenital reticular ichthyosiform erythroderma","secondary_identifiers":["MESH:C563781","Orphanet:281190","GARD:17305","MEDGEN:777141","OMIM:609165","SCTID:703504006","icd11.foundation:565254051","UMLS:C3665704"],"synonyms":[{"name":"Aarau disease","type":"related"},{"name":"CRIE","type":"exact"},{"name":"IWC","type":"exact"},{"name":"erythroderma, ichthyosiform, congenital reticular","type":"related"},{"name":"erythrokeratoderma, reticular","type":"related"},{"name":"ichthyosis variegata","type":"exact"},{"name":"ichthyosis with confetti","type":"exact"}],"termid":"MONDO:0012208","xrefs":{"Monarch":{"xref_id":"0012208"}}}


id: PBO:0048075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 26","termid":"PBO:0048075"}


id: PBO:0061539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP2/Sun RNA methyltransferase 4","termid":"PBO:0061539"}


id: GO:0099056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of presynaptic membrane (obsolete GO:0099056)","synonyms":[{"name":"integral component of presynaptic plasma membrane","type":"exact"}],"termid":"GO:0099056"}


id: PBO:0061365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 25","termid":"PBO:0061365"}


id: PBO:0063974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 8","termid":"PBO:0063974"}


id: PBO:0000812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin synthase/ hydrolase fusion protein (predicted)","termid":"PBO:0000812"}


id: PBO:0111865
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein","termid":"PBO:0111865"}


id: MONDO:0005466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sleep disorder characterized by excessive sleepiness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypersomnia","secondary_identifiers":["UMLS:C0917799","ICD9:780.54","HP:0100786","EFO:0005246","NCIT:C78346","SCTID:77692006","MEDGEN:214588"],"synonyms":[{"name":"hypersomnia","type":"exact"},{"name":"hypersomnia (disease)","type":"exact"}],"termid":"MONDO:0005466","xrefs":{"Monarch":{"xref_id":"0005466"}}}


id: PBO:0042084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 150 pseudogene 1","termid":"PBO:0042084"}


id: PBO:0049352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 10","termid":"PBO:0049352"}


id: PBO:0083918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Forms dehydrodolichyl diphosphate synthase complex with RER2 or SRT1; tet-repressible mutant shows accumulation of hypoglycosylated forms of CPY, suggesting that Nus1p may be involved in protein trafficking; mutations in human homolog NUS1 have been implicated in congenital scoliosis, neurological impairment, refractory epilepsy, hearing deficit, and visual impairment; human cis-prenyltransferase complex complements yeast null mutant","termid":"PBO:0083918"}


id: MONDO:0024293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polyposis, gastric, Dos Santos and de Magalhaes 1980 (obsolete MONDO:0024293)","secondary_identifiers":["OMIM:175020"],"termid":"MONDO:0024293","xrefs":{"Monarch":{"xref_id":"0024293"}}}


id: MONDO:0004128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A large cell lung carcinoma detectable by sputum cytology only. The primary tumor is undetectable radiographically or during bronchoscopy; therefore, it can not be assessed.","definition_xrefs":["NCIT:C6685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung large cell carcinoma","termid":"MONDO:0003050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung occult large cell carcinoma","secondary_identifiers":["UMLS:C1335095","DOID:7169","MEDGEN:235399"],"synonyms":[{"name":"occult large cell carcinoma of lung","type":"related"},{"name":"occult large cell carcinoma of the lung","type":"exact"},{"name":"occult large cell lung carcinoma","type":"related"}],"termid":"MONDO:0004128","xrefs":{"Monarch":{"xref_id":"0004128"}}}


id: PBO:0075607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPON1 antisense RNA 1","termid":"PBO:0075607"}


id: MONDO:0015939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An autoimmune form of systemic disease.","definition_xrefs":["MONDO:patterns/autoimmune"],"gene_count":0,"genotype_count":0,"name":"obsolete systemic autoimmune disease (obsolete MONDO:0015939)","secondary_identifiers":["Orphanet:182228"],"synonyms":[{"name":"autoimmune systemic disease","type":"exact"}],"termid":"MONDO:0015939","xrefs":{"Monarch":{"xref_id":"0015939"}}}


id: PBO:0086133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for maturation of mitochondrial [4Fe-4S] proteins; functions in a complex with Isa1p and possibly Iba57p; localizes to the mitochondrial intermembrane space, overexpression of ISA2 suppresses grx5 mutations","termid":"PBO:0086133"}


id: GO:0060286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cell motility due to the motion of one or more flagella.","definition_xrefs":["GOC:dph","GOC:mlg","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete flagellar cell motility (obsolete GO:0060286)","synonyms":[{"name":"flagellar cell motility","type":"exact"}],"termid":"GO:0060286"}


id: PBO:0052636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 4","termid":"PBO:0052636"}


id: GO:0033324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of choline (2-hydroxyethyltrimethylammonium), via the intermediate N-monomethylethanolamine.","definition_xrefs":["GOC:mah","MetaCyc:PWY-3542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline biosynthetic process","termid":"GO:0042425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline biosynthetic process via N-monomethylethanolamine","synonyms":[{"name":"choline anabolism via N-monomethylethanolamine","type":"exact"},{"name":"choline biosynthesis via N-monomethylethanolamine","type":"exact"},{"name":"choline formation via N-monomethylethanolamine","type":"exact"},{"name":"choline synthesis via N-monomethylethanolamine","type":"exact"}],"termid":"GO:0033324"}


id: GO:0034730
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SMN-Sm protein complex formed by the association of the methylated Sm proteins B/B', D1, D2, D3, E, F, and G with the SMN complex.","definition_xrefs":["PMID:17401408","PMID:12975319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMN-Sm protein complex","termid":"GO:0034719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"SmD-containing SMN-Sm protein complex","synonyms":[{"name":"SMN-containing protein complex","type":"broad"}],"termid":"GO:0034730"}


id: GO:1905269
data:
  {"annotated_genes":["SJAG_00142","SJAG_02342","SJAG_02592","SJAG_02990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[91511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"},{"annotations":[91512,94705,110716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chromatin organization.","definition_xrefs":["GO_REF:0000058","GOC:pr","GOC:TermGenie","GOC:vw","PMID:654321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromatin organization","termid":"GO:1902275"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_02342":null,"SJAG_02592":null,"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"positive regulation of chromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903310","GO:0045799"],"synonyms":[{"name":"activation of chromatin assembly or disassembly","type":"narrow"},{"name":"activation of chromatin organisation","type":"narrow"},{"name":"activation of chromatin organization","type":"narrow"},{"name":"activation of establishment or maintenance of chromatin architecture","type":"narrow"},{"name":"positive regulation of chromatin assembly or disassembly","type":"related"},{"name":"positive regulation of chromatin assembly/disassembly","type":"related"},{"name":"positive regulation of chromatin modification","type":"related"},{"name":"positive regulation of chromatin organisation","type":"exact"},{"name":"positive regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"stimulation of chromatin assembly or disassembly","type":"narrow"},{"name":"up regulation of chromatin assembly or disassembly","type":"related"},{"name":"up regulation of chromatin organisation","type":"exact"},{"name":"up regulation of chromatin organization","type":"exact"},{"name":"up regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"up-regulation of chromatin assembly or disassembly","type":"related"},{"name":"up-regulation of chromatin organisation","type":"exact"},{"name":"up-regulation of chromatin organization","type":"exact"},{"name":"up-regulation of establishment or maintenance of chromatin architecture","type":"exact"},{"name":"upregulation of chromatin assembly or disassembly","type":"exact"},{"name":"upregulation of chromatin organisation","type":"exact"},{"name":"upregulation of chromatin organization","type":"exact"},{"name":"upregulation of establishment or maintenance of chromatin architecture","type":"exact"}],"termid":"GO:1905269","terms_by_termid":{"GO:0031453":null,"GO:0090053":null,"GO:0090055":null}}


id: GO:0006166
data:
  {"annotated_genes":["SJAG_03881","SJAG_01070","SJAG_00134","SJAG_03096","SJAG_06634","SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61981,66911,73855,94086],"is_not":false,"summary":null,"term":"GO:0006166"},{"annotations":[117226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[70213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"}]},"cv_name":"biological_process","definition":"Any process which produces a purine nucleoside from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine-containing compound salvage","termid":"GO:0043101"},{"relation_name":"is_a","term_name":"nucleoside salvage","termid":"GO:0043174"},{"relation_name":"is_a","term_name":"purine ribonucleoside biosynthetic process","termid":"GO:0046129"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00134":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine ribonucleoside salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:P121-PWY"],"termid":"GO:0006166","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null}}


id: GO:1900113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K9 trimethylation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K9 trimethylation (obsolete GO:1900113)","synonyms":[{"name":"down regulation of histone H3-K9 trimethylation","type":"exact"},{"name":"down-regulation of histone H3-K9 trimethylation","type":"exact"},{"name":"downregulation of histone H3-K9 trimethylation","type":"exact"},{"name":"inhibition of histone H3-K9 trimethylation","type":"narrow"}],"termid":"GO:1900113"}


id: PR:Q9P7T4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mediator of replication checkpoint protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PMID:14585996","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mediator of replication checkpoint protein 1","termid":"PR:000027605"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of replication checkpoint protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC694.06c","secondary_identifiers":["UniProtKB:Q9P7T4","PR:000027606"],"synonyms":[{"name":"SPAC694.06C","type":"related"},{"name":"Spom972h-mrc1","type":"exact"}],"termid":"PR:Q9P7T4"}


id: PBO:0075643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty RTK signaling antagonist 2","termid":"PBO:0075643"}


id: PBO:0031101
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_septum_formation","termid":"PBO:0031101"}


id: PATO:0002467
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer resembling a thin narrow strip.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lathlike","termid":"PATO:0002467"}


id: GO:1902554
data:
  {"annotated_genes":["SJAG_03699","SJAG_01149","SJAG_00995","SJAG_01207","SJAG_00901","SJAG_05017","SJAG_01000","SJAG_03160","SJAG_03931","SJAG_04420","SJAG_03618","SJAG_00142","SJAG_02441","SJAG_02404","SJAG_00973","SJAG_01716","SJAG_02057","SJAG_04368","SJAG_04312","SJAG_03421","SJAG_01401","SJAG_00150","SJAG_01274","SJAG_01213","SJAG_03525","SJAG_04502","SJAG_04140","SJAG_00439","SJAG_03061","SJAG_00512","SJAG_05978","SJAG_04614","SJAG_00100","SJAG_03048","SJAG_03206","SJAG_04232","SJAG_03967","SJAG_00758","SJAG_01245","SJAG_03695","SJAG_03591","SJAG_01799"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72527,72938,118198,71133,80078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990316"},{"annotations":[71364,73758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005952"},{"annotations":[96132,79876,111288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[104667,70989,77084,106620,108721,71853,74359,78539,78670,88533,75159,70578,71978,106048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000307"},{"annotations":[75860,112409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031431"},{"annotations":[109243,109400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"},{"annotations":[76390,78463,74415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005956"},{"annotations":[76752,115213,70704,92501,79082,109348,74728,70413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005675"},{"annotations":[60993,112461,76612],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of protein serine/threonine kinase activity.","definition_xrefs":["PMID:18191223","GOC:TermGenie","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00142":null,"SJAG_00150":null,"SJAG_00439":null,"SJAG_00512":null,"SJAG_00758":null,"SJAG_00901":null,"SJAG_00973":null,"SJAG_00995":null,"SJAG_01000":null,"SJAG_01149":null,"SJAG_01207":null,"SJAG_01213":null,"SJAG_01245":null,"SJAG_01274":null,"SJAG_01401":null,"SJAG_01716":null,"SJAG_01799":null,"SJAG_02057":null,"SJAG_02404":null,"SJAG_02441":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03160":null,"SJAG_03206":null,"SJAG_03421":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03931":null,"SJAG_03967":null,"SJAG_04140":null,"SJAG_04232":null,"SJAG_04312":null,"SJAG_04368":null,"SJAG_04420":null,"SJAG_04502":null,"SJAG_04614":null,"SJAG_05017":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"serine/threonine protein kinase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"PDR16 complex dimer","type":"related"},{"name":"PDR16 complex homodimer","type":"related"}],"termid":"GO:1902554","terms_by_termid":{"GO:0000307":null,"GO:0005675":null,"GO:0005952":null,"GO:0005956":null,"GO:0031431":null,"GO:0070691":null,"GO:0070692":null,"GO:0070985":null,"GO:1990316":null}}


id: MONDO:0023015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duodenal atresia tetralogy of fallot","termid":"MONDO:0023015","xrefs":{"Monarch":{"xref_id":"0023015"}}}


id: MONDO:0017772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"oral erosive lichen","secondary_identifiers":["Orphanet:31142"],"termid":"MONDO:0017772","xrefs":{"Monarch":{"xref_id":"0017772"}}}


id: PATO:0002382
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A waxiness which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"},{"relation_name":"is_a","term_name":"waxiness","termid":"PATO:0002381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased waxiness","termid":"PATO:0002382"}


id: PBO:0110263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-FO ATP synthase peripheral stalk assembly factor Ina22","termid":"PBO:0110263"}


id: FYPO:0004352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to methylglyoxal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to methylglyoxal","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to methylglyoxal","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to methylglyoxal during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to methylglyoxal during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to methylglyoxal","type":"exact"}],"termid":"FYPO:0004352"}


id: PR:O14027
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- snz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal 5'-phosphate synthase subunit PDX1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.04","synonyms":[{"name":"PLP synthase subunit PDX1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-snz1","type":"exact"}],"termid":"PR:O14027"}


id: GO:0043383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of elimination of immature T cells which react strongly with self-antigens.","definition_xrefs":["ISBN:0781735149","PMID:12414722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell selection","termid":"GO:0045058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative T cell selection","synonyms":[{"name":"negative T lymphocyte selection","type":"exact"},{"name":"negative T-cell selection","type":"exact"},{"name":"negative T-lymphocyte selection","type":"exact"}],"termid":"GO:0043383"}


id: PBO:0074237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 49 member 4","termid":"PBO:0074237"}


id: PBO:0025550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Psi1","termid":"PBO:0025550"}


id: PBO:0004749
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome DISjunction","termid":"PBO:0004749"}


id: MONDO:1010321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal detachment that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal detachment, non-human animal","secondary_identifiers":["OMIA:000275"],"termid":"MONDO:1010321","xrefs":{"Monarch":{"xref_id":"1010321"}}}


id: PATO:0000452
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000452 relative pilosity value (obsolete PATO:0000452)","termid":"PATO:0000452"}


id: GO:0015816
data:
  {"annotated_genes":["SJAG_04984","SJAG_00626"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70328,98554],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904983"}]},"cv_name":"biological_process","definition":"The directed movement of glycine, aminoethanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00626":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"glycine transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0015816","terms_by_termid":{"GO:1904983":null}}


id: GO:1902161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cyclic nucleotide-gated ion channel activity.","definition_xrefs":["PMID:11420311","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"regulation of cyclic nucleotide-gated ion channel activity","termid":"GO:1902159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of cyclic nucleotide-gated ion channel activity","synonyms":[{"name":"activation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"activation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"activation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"activation of cyclic nucleotide-gated ion channel activity","type":"narrow"},{"name":"positive regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"positive regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"positive regulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"up regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"up regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"up regulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"up regulation of cyclic nucleotide-gated ion channel activity","type":"exact"},{"name":"up-regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"up-regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"up-regulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"up-regulation of cyclic nucleotide-gated ion channel activity","type":"exact"},{"name":"upregulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"upregulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"upregulation of cyclic nucleotide-activated ion channel activity","type":"exact"},{"name":"upregulation of cyclic nucleotide-gated ion channel activity","type":"exact"}],"termid":"GO:1902161"}


id: PBO:0053800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1055","termid":"PBO:0053800"}


id: PBO:0058628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6760","termid":"PBO:0058628"}


id: MONDO:0006393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma that arises from the rectum. It is characterized by prominent serration of the glands and the presence of generalized low-grade dysplasia.","definition_xrefs":["NCIT:C96463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum adenoma","termid":"MONDO:0000530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal traditional serrated adenoma","secondary_identifiers":["MEDGEN:474423","UMLS:C3272790","EFO:1000503"],"synonyms":[{"name":"rectal TSA","type":"exact"},{"name":"rectal serrated adenoma","type":"exact"},{"name":"rectal serrated adenoma type II","type":"exact"},{"name":"rectal traditional serrated adenoma","type":"exact"}],"termid":"MONDO:0006393","xrefs":{"Monarch":{"xref_id":"0006393"}}}


id: POMBASE_GENE_EX_REL:not_happens_during
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not_happens_during","termid":"POMBASE_GENE_EX_REL:not_happens_during"}


id: RO:0002573
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between an attribute or a qualifier and another attribute.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_modifier","termid":"RO:0002573"}


id: GO:0005787
data:
  {"annotated_genes":["SJAG_01750","SJAG_03737","SJAG_02867","SJAG_03261"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61996,66053,68241,74254],"is_not":false,"summary":null,"term":"GO:0005787"}]},"cv_name":"cellular_component","definition":"A protein complex that is located in the endoplasmic reticulum membrane and cleaves the signal sequence from precursor proteins following their transport out of the cytoplasmic space.","definition_xrefs":["PMID:7615509","GOC:sgd_curators","PMID:1846444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"serine-type endopeptidase complex","termid":"GO:1905370"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01750":null,"SJAG_02867":null,"SJAG_03261":null,"SJAG_03737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005789","GO:0005575","GO:0032991","GO:0005737","GO:0005783"],"is_obsolete":false,"name":"signal peptidase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0005787","terms_by_termid":{"GO:0005787":null}}


id: GO:0043717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-2-hydroxyglutaryl-CoA = H2O + glutaconyl-CoA.","definition_xrefs":["MetaCyc:RXN-1083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-hydroxyglutaryl-CoA dehydratase activity","secondary_identifiers":["RHEA:42448"],"synonyms":[{"name":"(R)-2-hydroxyglutaryl-CoA dehydratase activity","type":"exact"}],"termid":"GO:0043717"}


id: MONDO:0012067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited susceptibility to asthma in which the cause of the disease is a mutation in the NPSR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma-related traits, susceptibility to, 2","secondary_identifiers":["OMIM:608584","UMLS:C1837811","MEDGEN:324885"],"synonyms":[{"name":"ASRT2","type":"related"},{"name":"NPSR1 inherited susceptibility to asthma","type":"exact"},{"name":"asthma, susceptibility to, 2","type":"exact"},{"name":"asthma-related traits, susceptibility to, 2","type":"exact"},{"name":"asthma-related traits, susceptibility to, type 2","type":"exact"},{"name":"inherited susceptibility to asthma caused by mutation in NPSR1","type":"exact"}],"termid":"MONDO:0012067","xrefs":{"Monarch":{"xref_id":"0012067"}}}


id: MOD:00470
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS-LC-Biotin","synonyms":[{"name":"NHS-LC-Biotin","type":"related"}],"termid":"MOD:00470"}


id: GO:0042019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-23.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-23 binding","synonyms":[{"name":"IL-23 binding","type":"exact"}],"termid":"GO:0042019"}


id: PBO:0062763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily Q member 1 pseudogene","termid":"PBO:0062763"}


id: PBO:0047577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGFR1 oncogene partner 2","termid":"PBO:0047577"}


id: PBO:0068459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 35, pseudogene","termid":"PBO:0068459"}


id: MOD:00224
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to 1-chondroitin sulfate-L-aspartic acid ester","definition_xrefs":["RESID:AA0219","PubMed:1898736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-chondroitin sulfate-L-aspartic acid ester","synonyms":[{"name":"1-aspartic acid ester with 6-chondroitin 4-sulfate","type":"exact"},{"name":"1-chondroitin sulfate-L-aspartic acid ester","type":"exact"},{"name":"MOD_RES Aspartate 1-(chondroitin 4-sulfate)-ester","type":"exact"},{"name":"poly[beta-1,4-D-glucopyranuronosyl-beta-1,3-(2-acetamido-2-deoxy-4-sulfate D-galactosyl)]beta-1,4-D-glucopyranuronosyl-beta-1,3-(2-acetamido-2-deoxy-4-sulfate-6-(1-L-aspartyl)-D-galactose)","type":"exact"},{"name":"protein-glycosaminoglycan-protein cross-link","type":"exact"}],"termid":"MOD:00224"}


id: PBO:0049258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-secretase activating protein","termid":"PBO:0049258"}


id: GO:0070468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release by odontoblasts of the extracellular matrix constituents, including collagen, that form the basis of dentin.","definition_xrefs":["PMID:12856968","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix constituent secretion","termid":"GO:0070278"},{"relation_name":"part_of","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"dentin extracellular matrix secretion","synonyms":[{"name":"dentin secretion","type":"related"},{"name":"dentine secretion","type":"related"},{"name":"predentin secretion","type":"related"}],"termid":"GO:0070468"}


id: PBO:0061705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar and spindle associated protein 1","termid":"PBO:0061705"}


id: PBO:0067435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 556, pseudogene","termid":"PBO:0067435"}


id: MONDO:0017125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oculofaciocardiodental syndrome (obsolete MONDO:0017125)","termid":"MONDO:0017125","xrefs":{"Monarch":{"xref_id":"0017125"}}}


id: MONDO:0017933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy and renal tubular disease due to mitochondrial DNA mutation is a mitochondrial oxidative phosphorylation disorder characterized by hypertrophic and dilated cardiomyopathy, failure to thrive, myopathy with generalized hypotonia and increased creatine kinase, developmental delay and/or regression with cerebral atrophy on brain MRI, renal manifestations including chronic renal failure, renal tubular acidosis and lactic acidosis. Additional clinical features include seizures and respiratory failure.","definition_xrefs":["Orphanet:324525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy and renal tubular disease due to mitochondrial DNA mutation","secondary_identifiers":["UMLS:C4749942","MEDGEN:1650300","GARD:21442"],"synonyms":[{"name":"hypertrophic cardiomyopathy and renal tubular disease due to mtDNA mutation","type":"exact"}],"termid":"MONDO:0017933","xrefs":{"Monarch":{"xref_id":"0017933"}}}


id: GO:1990597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of IRE1 (inositol-requiring enzyme-1) bound to AIP1 (ASK1-interacting protein 1/DAB2-interacting protein).","definition_xrefs":["GOC:bf","GOC:PARL","PMID:18281285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"AIP1-IRE1 complex","synonyms":[{"name":"AIP1-ERN1 complex","type":"related"},{"name":"IRE1-DAB2IP complex","type":"exact"},{"name":"IRE1alpha-AIP1 complex","type":"narrow"}],"termid":"GO:1990597"}


id: PBO:0063509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDS5 cohesin associated factor B","termid":"PBO:0063509"}


id: PBO:0069399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 659, pseudogene","termid":"PBO:0069399"}


id: MONDO:0010695
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occipital hair, white lock of","secondary_identifiers":["UMLS:C1839578","OMIM:310900","MEDGEN:326917"],"synonyms":[{"name":"occipital hair, white lock of","type":"exact"}],"termid":"MONDO:0010695","xrefs":{"Monarch":{"xref_id":"0010695"}}}


id: GO:0016554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a cytosine residue to uridine in an RNA molecule by deamination.","definition_xrefs":["PMID:11092837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base conversion or substitution editing","termid":"GO:0016553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytidine to uridine editing","secondary_identifiers":["Reactome:R-HSA-72200"],"termid":"GO:0016554"}


id: PBO:0051128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2-5","termid":"PBO:0051128"}


id: PBO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase (predicted)","termid":"PBO:0000121"}


id: SO:0000203
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Messenger RNA sequences that are untranslated and lie five prime or three prime to sequences which are translated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR","synonyms":[{"name":"untranslated region","type":"exact"}],"termid":"SO:0000203"}


id: PBO:0011970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYRK family protein kinase Pom2","termid":"PBO:0011970"}


id: PBO:0071463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 4","termid":"PBO:0071463"}


id: PR:O74343
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pseudouridylate synthase 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03082","PANTHER:PTHR13326:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase C1A4.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.09","secondary_identifiers":["UniProtKB:O74343"],"synonyms":[{"name":"Spom972h-PUS7","type":"exact"}],"termid":"PR:O74343"}


id: PBO:0029237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_disassembly","termid":"PBO:0029237"}


id: PBO:0017872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester transmembrane transporter (predicted)","termid":"PBO:0017872"}


id: GO:1903580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ATP metabolic process.","definition_xrefs":["GO_REF:0000058","PMID:20695849","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide metabolic process","termid":"GO:1900544"},{"relation_name":"is_a","term_name":"regulation of ATP metabolic process","termid":"GO:1903578"},{"relation_name":"positively_regulates","term_name":"ATP metabolic process","termid":"GO:0046034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"positive regulation of ATP metabolic process","synonyms":[{"name":"activation of ATP metabolic process","type":"narrow"},{"name":"activation of ATP metabolism","type":"narrow"},{"name":"positive regulation of ATP metabolism","type":"exact"},{"name":"up regulation of ATP metabolic process","type":"exact"},{"name":"up regulation of ATP metabolism","type":"exact"},{"name":"up-regulation of ATP metabolic process","type":"exact"},{"name":"up-regulation of ATP metabolism","type":"exact"},{"name":"upregulation of ATP metabolic process","type":"exact"},{"name":"upregulation of ATP metabolism","type":"exact"}],"termid":"GO:1903580"}


id: MONDO:0012021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 17, autosomal dominant","secondary_identifiers":["MEDGEN:854818","OMIM:608367","UMLS:C3888211"],"synonyms":[{"name":"MYP17","type":"exact"},{"name":"myopia 17, autosomal dominant","type":"exact"},{"name":"myopia 4","type":"related"},{"name":"myopia 4, formerly","type":"related"}],"termid":"MONDO:0012021","xrefs":{"Monarch":{"xref_id":"0012021"}}}


id: GO:1900616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of emericellamide A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"emericellamide catabolic process","termid":"GO:1900556"},{"relation_name":"is_a","term_name":"emericellamide A metabolic process","termid":"GO:1900615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"emericellamide A catabolic process","synonyms":[{"name":"emericellamide A breakdown","type":"exact"},{"name":"emericellamide A catabolism","type":"exact"},{"name":"emericellamide A degradation","type":"exact"}],"termid":"GO:1900616"}


id: MONDO:0003005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Accumulation of intraretinal fluid and protein in the macula, which may result in swelling and decreased central vision.","definition_xrefs":["NCIT:C35468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macular degeneration","termid":"MONDO:0003004"},{"relation_name":"is_a","term_name":"retinal edema","termid":"MONDO:0004037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular retinal edema","secondary_identifiers":["DOID:4449","MEDGEN:75732","SCTID:37231002","UMLS:C0271051"],"synonyms":[{"name":"edema, macular","type":"related"},{"name":"macula lutea retinal edema","type":"exact"},{"name":"macula lutea retinal oedema","type":"exact"},{"name":"macular edema","type":"exact"},{"name":"macular oedema","type":"exact"},{"name":"retinal edema of macula lutea","type":"exact"},{"name":"retinal oedema of macula lutea","type":"exact"}],"termid":"MONDO:0003005","xrefs":{"Monarch":{"xref_id":"0003005"}}}


id: GO:0010684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tricyclic triterpenoid compounds, terpenoids with six isoprene units and 3 rings.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricyclic triterpenoid metabolic process","termid":"GO:0010683"},{"relation_name":"is_a","term_name":"triterpenoid catabolic process","termid":"GO:0016105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"tricyclic triterpenoid catabolic process","synonyms":[{"name":"tricyclic triterpenoid catabolism","type":"exact"}],"termid":"GO:0010684"}


id: PBO:0060719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A8","termid":"PBO:0060719"}


id: PBO:0060645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 4 pseudogene 4","termid":"PBO:0060645"}


id: GO:0045921
data:
  {"annotated_genes":["SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100516],"is_not":false,"summary":null,"term":"GO:0045921"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocytosis","termid":"GO:0017157"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"exocytosis","termid":"GO:0006887"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00661":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of exocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of exocytosis","type":"narrow"},{"name":"stimulation of exocytosis","type":"narrow"},{"name":"up regulation of exocytosis","type":"exact"},{"name":"up-regulation of exocytosis","type":"exact"},{"name":"upregulation of exocytosis","type":"exact"}],"termid":"GO:0045921","terms_by_termid":{"GO:0045921":null}}


id: PBO:0049074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 89 pseudogene","termid":"PBO:0049074"}


id: MONDO:0021247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete renal pelvis neoplasm (obsolete MONDO:0021247)","termid":"MONDO:0021247","xrefs":{"Monarch":{"xref_id":"0021247"}}}


id: PBO:0117085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARGC1A antisense RNA 1","termid":"PBO:0117085"}


id: PBO:0015259
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.3.1.24","termid":"PBO:0015259"}


id: PBO:0000628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II complex subunit Rpb2","termid":"PBO:0000628"}


id: PBO:0017770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Nuf2","termid":"PBO:0017770"}


id: PBO:0112183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal phosphate-dependent transferase, possible cystathionine beta-lyase implicated in sulfur metabolism","termid":"PBO:0112183"}


id: GO:0032886
data:
  {"annotated_genes":["SJAG_00514","SJAG_00082","SJAG_02045","SJAG_02332","SJAG_03048","SJAG_03637","SJAG_00845","SJAG_03073","SJAG_00333","SJAG_01821","SJAG_04461","SJAG_00244","SJAG_04597","SJAG_04464","SJAG_04312","SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902845"},{"annotations":[101785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062168"},{"annotations":[102191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[90325,94745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902846"},{"annotations":[111813],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0110161"},{"annotations":[94746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902854"},{"annotations":[115706,113431,91468,100520,104046,105716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070507"},{"annotations":[71006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031110"},{"annotations":[71932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[111393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032888"},{"annotations":[115437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[90198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any cellular process that depends upon or alters the microtubule cytoskeleton.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"microtubule-based process","termid":"GO:0007017"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_00333":null,"SJAG_00514":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01821":null,"SJAG_02045":null,"SJAG_02332":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03637":null,"SJAG_04312":null,"SJAG_04461":null,"SJAG_04464":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microtubule-based process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0032886","terms_by_termid":{"GO:0031110":null,"GO:0031117":null,"GO:0032888":null,"GO:0060236":null,"GO:0062168":null,"GO:0070507":null,"GO:0110161":null,"GO:0110162":null,"GO:1901673":null,"GO:1902845":null,"GO:1902846":null,"GO:1902854":null}}


id: GO:0003864
data:
  {"annotated_genes":["SJAG_05200"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77842],"is_not":false,"summary":null,"term":"GO:0003864"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + 3-methyl-2-oxobutanoate = tetrahydrofolate + 2-dehydropantoate.","definition_xrefs":["EC:2.1.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"3-methyl-2-oxobutanoate hydroxymethyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN","RHEA:11824"],"synonyms":[{"name":"5,10-methylene tetrahydrofolate:alpha-ketoisovalerate hydroxymethyltransferase activity","type":"related"},{"name":"5,10-methylenetetrahydrofolate:3-methyl-2-oxobutanoate hydroxymethyltransferase activity","type":"related"},{"name":"alpha-ketoisovalerate hydroxymethyltransferase activity","type":"related"},{"name":"dehydropantoate hydroxymethyltransferase activity","type":"related"},{"name":"ketopantoate hydroxymethyltransferase activity","type":"related"},{"name":"oxopantoate hydroxymethyltransferase activity","type":"related"}],"termid":"GO:0003864","terms_by_termid":{"GO:0003864":null}}


id: GO:0098982
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that uses GABA as a neurotransmitter. These synapses are typically inhibitory.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"GABA-ergic synapse","termid":"GO:0098982"}


id: PBO:0029031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation_at_telomere","termid":"PBO:0029031"}


id: GO:0075183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organized mass of hyphae is formed and numerous infective hyphae develop from the hyphae mass.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"infection cushion formation","synonyms":[{"name":"infection cushion formation on or near host","type":"exact"}],"termid":"GO:0075183"}


id: GO:0042274
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  {"annotated_genes":["SJAG_04342","SJAG_00965","SJAG_00889","SJAG_04687","SJAG_02300","SJAG_02025","SJAG_02553","SJAG_01272","SJAG_03410","SJAG_04224","SJAG_04900","SJAG_00294","SJAG_03422","SJAG_03569","SJAG_01604","SJAG_06613","SJAG_01296","SJAG_04562","SJAG_03617","SJAG_03798","SJAG_01338","SJAG_04656","SJAG_03905","SJAG_04524","SJAG_01323","SJAG_04916","SJAG_01551","SJAG_01420","SJAG_00897","SJAG_03654","SJAG_03954","SJAG_02662","SJAG_02020","SJAG_03028","SJAG_01347","SJAG_03262","SJAG_04746","SJAG_00879","SJAG_04339","SJAG_02184","SJAG_01877","SJAG_03252","SJAG_03156","SJAG_04890","SJAG_02094","SJAG_02608","SJAG_02358","SJAG_04069","SJAG_04979","SJAG_03077","SJAG_00344","SJAG_01548","SJAG_03583","SJAG_01169","SJAG_02340","SJAG_05187","SJAG_02475","SJAG_01609","SJAG_04582","SJAG_03857","SJAG_01907","SJAG_00572","SJAG_03846","SJAG_00945","SJAG_02046","SJAG_05018","SJAG_00986","SJAG_04033","SJAG_04998","SJAG_02749","SJAG_03796","SJAG_03952","SJAG_02479","SJAG_02821","SJAG_02911","SJAG_02644","SJAG_01250","SJAG_00562","SJAG_03341","SJAG_03234","SJAG_04029","SJAG_02372","SJAG_00955","SJAG_04472","SJAG_01623","SJAG_01201","SJAG_01618","SJAG_04424","SJAG_02499","SJAG_02250","SJAG_02335","SJAG_02547","SJAG_03755","SJAG_02681","SJAG_03539","SJAG_04908","SJAG_00544","SJAG_04174","SJAG_02702","SJAG_02803","SJAG_03424","SJAG_03425","SJAG_00772","SJAG_01764","SJAG_01115"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65452,70262,71571,73093,73239,74712,74805,76333,78711,91845,92203,100819,103251,103424,107395,109913,118423],"is_not":false,"summary":null,"term":"GO:0042274"},{"annotations":[73360,78304,70774],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000480"},{"annotations":[97118,118994,74875,115781,78604,71611,106014,109372,113871,96832,103468,72204,70772,105124,115693,104906,106013,95042,73358],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000447"},{"annotations":[74876],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000461"},{"annotations":[73359,78303,70773,109373],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000472"},{"annotations":[70468,91643,89012,59426,95095,92373,110942,79761,73061,102020,73851,74135,76240,75004,76596,97184,94023,100934,96057,80373,102265,113924,73793,112376,100806,98849,75782],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030490"},{"annotations":[71212,77424,78796,79598,91557,80586,78430,97367,72000,75578,72136,73862,73294,73457,76405,80739,73366,80059,88142,109462,115109,75556,71966,66451,76079,89561,75499,74685],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000462"},{"annotations":[74871,73623,73791,72133,75087,77573,75580,119010,76933,70405,75096,74954,77010,95096],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000028"},{"annotations":[72717],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904812"},{"annotations":[113453,73357],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034462"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a small ribosomal subunit; includes transport to the sites of protein synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex biogenesis","termid":"GO:0022613"},{"relation_name":"part_of","term_name":"ribosome biogenesis","termid":"GO:0042254"}],"gene_count":105,"genes_by_uniquename":{"SJAG_00294":null,"SJAG_00344":null,"SJAG_00544":null,"SJAG_00562":null,"SJAG_00572":null,"SJAG_00772":null,"SJAG_00879":null,"SJAG_00889":null,"SJAG_00897":null,"SJAG_00945":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_00986":null,"SJAG_01115":null,"SJAG_01169":null,"SJAG_01201":null,"SJAG_01250":null,"SJAG_01272":null,"SJAG_01296":null,"SJAG_01323":null,"SJAG_01338":null,"SJAG_01347":null,"SJAG_01420":null,"SJAG_01548":null,"SJAG_01551":null,"SJAG_01604":null,"SJAG_01609":null,"SJAG_01618":null,"SJAG_01623":null,"SJAG_01764":null,"SJAG_01877":null,"SJAG_01907":null,"SJAG_02020":null,"SJAG_02025":null,"SJAG_02046":null,"SJAG_02094":null,"SJAG_02184":null,"SJAG_02250":null,"SJAG_02300":null,"SJAG_02335":null,"SJAG_02340":null,"SJAG_02358":null,"SJAG_02372":null,"SJAG_02475":null,"SJAG_02479":null,"SJAG_02499":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02608":null,"SJAG_02644":null,"SJAG_02662":null,"SJAG_02681":null,"SJAG_02702":null,"SJAG_02749":null,"SJAG_02803":null,"SJAG_02821":null,"SJAG_02911":null,"SJAG_03028":null,"SJAG_03077":null,"SJAG_03156":null,"SJAG_03234":null,"SJAG_03252":null,"SJAG_03262":null,"SJAG_03341":null,"SJAG_03410":null,"SJAG_03422":null,"SJAG_03424":null,"SJAG_03425":null,"SJAG_03539":null,"SJAG_03569":null,"SJAG_03583":null,"SJAG_03617":null,"SJAG_03654":null,"SJAG_03755":null,"SJAG_03796":null,"SJAG_03798":null,"SJAG_03846":null,"SJAG_03857":null,"SJAG_03905":null,"SJAG_03952":null,"SJAG_03954":null,"SJAG_04029":null,"SJAG_04033":null,"SJAG_04069":null,"SJAG_04174":null,"SJAG_04224":null,"SJAG_04339":null,"SJAG_04342":null,"SJAG_04424":null,"SJAG_04472":null,"SJAG_04524":null,"SJAG_04562":null,"SJAG_04582":null,"SJAG_04656":null,"SJAG_04687":null,"SJAG_04746":null,"SJAG_04890":null,"SJAG_04900":null,"SJAG_04908":null,"SJAG_04916":null,"SJAG_04979":null,"SJAG_04998":null,"SJAG_05018":null,"SJAG_05187":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"ribosomal small subunit biogenesis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribosomal small subunit biogenesis and assembly","type":"exact"}],"termid":"GO:0042274","terms_by_termid":{"GO:0000028":null,"GO:0000447":null,"GO:0000461":null,"GO:0000462":null,"GO:0000472":null,"GO:0000480":null,"GO:0030490":null,"GO:0034462":null,"GO:0042274":null,"GO:1904812":null}}


id: PBO:0061648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT19 pseudogene 6","termid":"PBO:0061648"}


id: PBO:0070742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 12","termid":"PBO:0070742"}


id: PBO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATRIP, ATR checkpoint kinase regulatory subunit Rad26","termid":"PBO:0002522"}


id: PBO:0116692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR548BA host gene","termid":"PBO:0116692"}


id: PBO:0070913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 21","termid":"PBO:0070913"}


id: PBO:0029169
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_plasma_membrane","termid":"PBO:0029169"}


id: GO:0060797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to an unspecified cell adopting a mesoderm fate.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in primary germ layer cell fate commitment (obsolete GO:0060797)","synonyms":[{"name":"transforming growth factor beta receptor signalling pathway involved in primary germ layer cell fate commitment","type":"exact"}],"termid":"GO:0060797"}


id: MONDO:0007260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Car factor deficiency","secondary_identifiers":["UMLS:C1861898","MEDGEN:354615","MESH:C566176","OMIM:114650"],"synonyms":[{"name":"Car factor deficiency","type":"exact"}],"termid":"MONDO:0007260","xrefs":{"Monarch":{"xref_id":"0007260"}}}


id: GO:0016636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["EC:1.3.7.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor","synonyms":[{"name":"oxidoreductase activity, acting on the CH-CH group of donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016636"}


id: PBO:0052206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNQ2 antisense RNA 1","termid":"PBO:0052206"}


id: PBO:0045346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"docking protein 6","termid":"PBO:0045346"}


id: GO:1901847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinate.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nicotinate metabolic process","synonyms":[{"name":"nicotinate metabolism","type":"exact"}],"termid":"GO:1901847"}


id: GO:0001806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response driven by T cell recognition of processed soluble or cell-associated antigens leading to cytokine release and leukocyte activation.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell mediated immunity","termid":"GO:0002456"},{"relation_name":"is_a","term_name":"hypersensitivity","termid":"GO:0002524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type IV hypersensitivity","secondary_identifiers":["GO:0016069","Wikipedia:Type_IV_hypersensitivity"],"synonyms":[{"name":"delayed hypersensitivity response","type":"exact"},{"name":"delayed-type hypersensitivity","type":"exact"}],"termid":"GO:0001806"}


id: GO:0042739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of a drug that has originated internally within the cell or organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete endogenous drug catabolic process (obsolete GO:0042739)","synonyms":[{"name":"endogenous drug breakdown","type":"exact"},{"name":"endogenous drug catabolism","type":"exact"},{"name":"endogenous drug degradation","type":"exact"}],"termid":"GO:0042739"}


id: MONDO:0010328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alpha-thalassemia-myelodysplastic syndrome (ATMDS) is an acquired form of alpha-thalassemia characterized by a myelodysplastic syndrome (MDS) or more rarely a myeloproliferative disease (MPD) associated with hemoglobin H disease (HbH).","definition_xrefs":["Orphanet:231401"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acquired","termid":"MONDO:0021141"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"alpha-thalassemia-myelodysplastic syndrome","secondary_identifiers":["GARD:17167","ICD10CM:D56.0","MEDGEN:108433","OMIM:300448","SCTID:307343001","MESH:C563023","UMLS:C0585216","ICD9:282.49","DOID:0112125"],"synonyms":[{"name":"ALPHA-thalassemia myelodysplasia syndrome","type":"related"},{"name":"ATMDS","type":"exact"},{"name":"Haemoglobin H disease, acquired","type":"related"},{"name":"Hemoglobin H disease, acquired","type":"related"},{"name":"acquired HbH disease","type":"exact"},{"name":"acquired haemoglobin H disease","type":"exact"},{"name":"acquired hemoglobin H disease","type":"exact"},{"name":"alpha-thalassemia myelodysplasia syndrome, somatic","type":"exact"}],"termid":"MONDO:0010328","xrefs":{"Monarch":{"xref_id":"0010328"}}}


id: PBO:0088419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane i-AAA protease complex TPR repeat subunit Mgr3","termid":"PBO:0088419"}


id: GO:0035691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by macrophage migration inhibitory factor binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","PMID:12782713","GOC:signaling","PMID:19413900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"macrophage migration inhibitory factor signaling pathway","synonyms":[{"name":"MIF signaling pathway","type":"exact"},{"name":"macrophage migration inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:0035691"}


id: GO:0048545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a steroid hormone stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to steroid hormone","synonyms":[{"name":"response to steroid hormone stimulus","type":"exact"}],"termid":"GO:0048545"}


id: PBO:0084002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerol kinase; converts glycerol to glycerol-3-phosphate; glucose repression of expression is mediated by Adr1p and Ino2p-Ino4p; derepression of expression on non-fermentable carbon sources is mediated by Opi1p and Rsf1p","termid":"PBO:0084002"}


id: PBO:0027782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_threonine_phosphorylation","termid":"PBO:0027782"}


id: PBO:0061155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide nucleotide adenylyltransferase 3","termid":"PBO:0061155"}


id: PBO:0078171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 1-2","termid":"PBO:0078171"}


id: PBO:0061279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 like","termid":"PBO:0061279"}


id: MONDO:0975747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 95","secondary_identifiers":["DOID:0070594","OMIM:620917"],"termid":"MONDO:0975747","xrefs":{"Monarch":{"xref_id":"0975747"}}}


id: PBO:0074239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 51 subunit alpha","termid":"PBO:0074239"}


id: PBO:0064052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 86","termid":"PBO:0064052"}


id: PBO:0076116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 19","termid":"PBO:0076116"}


id: MONDO:0011734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cardioneuromyopathy with hyaline masses and nemaline rods","secondary_identifiers":["OMIM:606842","MESH:C564655","UMLS:C1847387","MEDGEN:339747"],"synonyms":[{"name":"Cardioneuromyopathy with hyaline masses and nemaline rods","type":"exact"}],"termid":"MONDO:0011734","xrefs":{"Monarch":{"xref_id":"0011734"}}}


id: PBO:0005877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase 1 (predicted)","termid":"PBO:0005877"}


id: PBO:0077357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 97 pseudogene 1","termid":"PBO:0077357"}


id: PBO:0085811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; essential for growth under anaerobic conditions; mutation causes decreased expression of ATP2, impaired respiration, defective sterol uptake, and altered levels/localization of ABC transporters Aus1p and Pdr11p","termid":"PBO:0085811"}


id: GO:0016610
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase is tetrameric with an alpha2-beta2 structure and nitrogenase reductase is a homodimer, and both are associated with metal ions, which differ between species. Both proteins are required for the enzyme activity of the complex, the formation of oxidized ferredoxin and ammonia from reduced ferredoxin and nitrogen.","definition_xrefs":["PMID:10852721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"nitrogenase complex","termid":"GO:0016610"}


id: GO:0019606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-oxobutyrate, the anion of the organic acid 2-oxobutyric acid, which contains a ketone group on carbon 2.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid catabolic process","termid":"GO:0019626"},{"relation_name":"is_a","term_name":"2-oxobutyrate metabolic process","termid":"GO:0046361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"2-oxobutyrate catabolic process","secondary_identifiers":["MetaCyc:2OXOBUTYRATECAT-PWY"],"synonyms":[{"name":"2-oxobutyrate breakdown","type":"exact"},{"name":"2-oxobutyrate catabolism","type":"exact"},{"name":"2-oxobutyrate degradation","type":"exact"},{"name":"alpha-ketobutyrate catabolic process","type":"exact"},{"name":"alpha-ketobutyrate catabolism","type":"exact"}],"termid":"GO:0019606"}


id: MONDO:0020069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Chronic form of encephalitis.","definition_xrefs":["MONDO:patterns/chronic"],"gene_count":0,"genotype_count":0,"name":"obsolete chronic encephalitis (obsolete MONDO:0020069)","secondary_identifiers":["Orphanet:98255"],"synonyms":[{"name":"encephalitis, chronic","type":"exact"}],"termid":"MONDO:0020069","xrefs":{"Monarch":{"xref_id":"0020069"}}}


id: PBO:0076937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFG pseudogene 1","termid":"PBO:0076937"}


id: GO:0060050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the glycosylation of one or more amino acid residues within a protein. Protein glycosylation is the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.","definition_xrefs":["GOC:dph","GOC:dms","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"positive regulation of protein modification process","termid":"GO:0031401"},{"relation_name":"is_a","term_name":"regulation of protein glycosylation","termid":"GO:0060049"},{"relation_name":"positively_regulates","term_name":"protein glycosylation","termid":"GO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein glycosylation","synonyms":[{"name":"positive regulation of protein amino acid glycosylation","type":"exact"}],"termid":"GO:0060050"}


id: PBO:0040464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase 13A5","termid":"PBO:0040464"}


id: MONDO:0007981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metachromatic leukodystrophy","termid":"MONDO:0018868"}],"gene_count":0,"genotype_count":0,"name":"obsolete metachromatic leukodystrophy, adult-onset, with normal arylsulfatase A (obsolete MONDO:0007981)","secondary_identifiers":["MESH:C563587","OMIM:156310"],"synonyms":[{"name":"metachromatic leukodystrophy, adult-onset, with normal arylsulfatase A","type":"exact"},{"name":"metachromatic leukodystrophy, adult-onset, with normal arylsulfatase type A","type":"exact"}],"termid":"MONDO:0007981","xrefs":{"Monarch":{"xref_id":"0007981"}}}


id: GO:0102625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cirsimaritin + S-adenosyl-L-methionine = H+ + S-adenosyl-L-homocysteine + salvigenin.","definition_xrefs":["RHEA:73251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cirsimaritin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15530"],"termid":"GO:0102625"}


id: GO:0141177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont mitigates the effects of recognition by a host innate immune effector. Effectors have a direct activity against a symbiont and include complement, antimicrobial peptides, and bacterial restriction enzymes. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:33330873","PMID:19208801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of host innate immune response","termid":"GO:0141043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of recognition by host innate immune effector","synonyms":[{"name":"evasion of symbiont recognition by host innate immune effector","type":"exact"}],"termid":"GO:0141177"}


id: PBO:0057566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 761","termid":"PBO:0057566"}


id: MONDO:0020583
data:
  {"annotated_genes":["SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012574"}]},"cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 17 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02231":null},"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4329664","NCIT:C129438","MEDGEN:1380521"],"synonyms":[{"name":"chromosome 17 abnormality","type":"related"}],"termid":"MONDO:0020583","terms_by_termid":{"MONDO:0012574":null},"xrefs":{"Monarch":{"xref_id":"0020583"}}}


id: RO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x bounds the sequence of y iff the upstream-most part of x is upstream of or coincident with the upstream-most part of y, and the downstream-most part of x is downstream of or coincident with the downstream-most part of y","direct_ancestors":[{"relation_name":"is_a","term_name":"sequentially_related_to","termid":"RO:0002514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bounds_sequence_of","termid":"RO:0002522"}


id: FYPO:0001943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of microtubule binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"abnormal microtubule binding","termid":"FYPO:0001943"}


id: PR:O74457
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-alpha-acetyltransferase 20 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23091:SF5","OMA:SCHPO04414","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal acetyltransferase B complex catalytic subunit naa20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.12","secondary_identifiers":["UniProtKB:O74457"],"synonyms":[{"name":"NatB Nalpha terminal acetyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NatB complex subunit naa20 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NAA20","type":"exact"}],"termid":"PR:O74457"}


id: PR:O94295
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pus2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.11","synonyms":[{"name":"Spom972h-pus2","type":"exact"},{"name":"tRNA pseudouridylate synthase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA-uridine isomerase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94295"}


id: MONDO:0032761
data:
  {"annotated_genes":["SJAG_04554"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87475],"is_not":false,"summary":null,"term":"MONDO:0032761"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04554":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 114","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684024","UMLS:C5193107","GARD:22662","OMIM:618456","DOID:0111642"],"synonyms":[{"name":"DFNB114","type":"narrow"},{"name":"deafness, autosomal recessive 114","type":"narrow"}],"termid":"MONDO:0032761","terms_by_termid":{"MONDO:0032761":null},"xrefs":{"Monarch":{"xref_id":"0032761"}}}


id: GO:0031479
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class IX myosin heavy chain and associated light chains. Myosin IX is monomeric with a motor domain containing an N-terminal extension and an insert in the actin binding interface, followed by four to six IQ motifs and a tail region that contains a zinc binding motif and a domain with homology to GTPase activating proteins (GAPs) of the Rho family of G-proteins.","definition_xrefs":["PMID:29679756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0015629","GO:0032991"],"is_obsolete":false,"name":"myosin IX complex","termid":"GO:0031479"}


id: PBO:0072321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 7","termid":"PBO:0072321"}


id: GO:0098685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse between the Schaffer collateral axon of a CA3 pyramidal cell and a CA1 pyramidal cell.","definition_xrefs":["PMID:16399689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Schaffer collateral - CA1 synapse","termid":"GO:0098685"}


id: MONDO:0011047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by sensorineural deafness, short stature, femoral epiphyseal dysplasia, umbilical and inguinal hernias and developmental delay (growth retardation and mild intellectual deficit).","definition_xrefs":["Orphanet:3218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness-epiphyseal dysplasia-short stature syndrome","secondary_identifiers":["GARD:1688","MEDGEN:371330","MESH:C535928","SCTID:716238003","OMIM:601351","UMLS:C1832438"],"synonyms":[{"name":"chitty-Hall-Baraitser syndrome","type":"exact"},{"name":"deafness, epiphyseal dysplasia, short stature","type":"related"},{"name":"deafness, femoral epiphyseal dysplasia, short stature and developmental delay","type":"related"},{"name":"growth retardation, deafness, femoral epiphyseal dysplasia, and lacrimal duct obstruction","type":"related"}],"termid":"MONDO:0011047","xrefs":{"Monarch":{"xref_id":"0011047"}}}


id: MONDO:1012777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dwarfism that occurs in horses due to a mutation in the B4GALT7 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"dwarfism, non-human animal","termid":"MONDO:1012971"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, B4GALT7-related, horse","secondary_identifiers":["OMIA:002068-9796"],"synonyms":[{"name":"dwarfism, Friesian horse","type":"related"}],"termid":"MONDO:1012777","xrefs":{"Monarch":{"xref_id":"1012777"}}}


id: PBO:0006169
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-exists_during","termid":"PBO:0006169"}


id: PBO:0040643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated X, apoptosis regulator","termid":"PBO:0040643"}


id: PBO:0046340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase family member 5","termid":"PBO:0046340"}


id: PBO:0042628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 3 pseudogene","termid":"PBO:0042628"}


id: PBO:0081034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 12B","termid":"PBO:0081034"}


id: PBO:0030039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_fatty_acid_synthase_activity","termid":"PBO:0030039"}


id: MONDO:0009430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive hypophosphatemic rickets in which the cause of the disease is a mutation in the DMP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive hypophosphatemic rickets","termid":"MONDO:0017324"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"hypophosphatemic rickets, autosomal recessive, 1","secondary_identifiers":["MESH:C562792","OMIM:241520","GARD:18416","MEDGEN:1632314","UMLS:C4551495"],"synonyms":[{"name":"ARHR1","type":"related"},{"name":"Arhr","type":"related"},{"name":"DMP1 autosomal recessive hypophosphatemic rickets","type":"exact"},{"name":"autosomal recessive hypophosphatemic rickets caused by mutation in DMP1","type":"exact"},{"name":"hypophosphatemia, autosomal recessive","type":"related"},{"name":"hypophosphatemic rickets, AR","type":"exact"},{"name":"hypophosphatemic rickets, autosomal recessive, 1","type":"exact"},{"name":"hypophosphatemic rickets, autosomal recessive, type 1","type":"exact"}],"termid":"MONDO:0009430","xrefs":{"Monarch":{"xref_id":"0009430"}}}


id: FYPO:0005171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of uracil into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal uracil import","termid":"FYPO:0005170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased uracil import","synonyms":[{"name":"decreased uracil import across plasma membrane","type":"exact"},{"name":"decreased uracil import during mitotic cell cycle","type":"related"},{"name":"decreased uracil import during vegetative growth","type":"exact"},{"name":"decreased uracil import into cell","type":"exact"},{"name":"decreased uracil uptake","type":"exact"},{"name":"reduced uracil import","type":"exact"}],"termid":"FYPO:0005171"}


id: PBO:0087100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit; required for translational accuracy; homologous to mammalian ribosomal protein S23 and bacterial S12; RPS23A has a paralog, RPS23B, that arose from the whole genome duplication; deletion of both RPS23A and RPS23B is lethal","termid":"PBO:0087100"}


id: PBO:0001460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase","termid":"PBO:0001460"}


id: GO:0018122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer, from NAD, of ADP-ribose to peptidyl-asparagine to form peptidyl-N4-(ADP-ribosyl)-L-asparagine.","definition_xrefs":["RESID:AA0231"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-asparagine ADP-ribosylation (obsolete GO:0018122)","termid":"GO:0018122"}


id: SO:0000970
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000970 theta_replication (obsolete SO:0000970)","synonyms":[{"name":"theta replication","type":"exact"}],"termid":"SO:0000970"}


id: MONDO:0013071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant Emery-Dreifuss muscular dystrophy in which the cause of the disease is a mutation in the SYNE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Emery-Dreifuss muscular dystrophy","termid":"MONDO:0020336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005336","MONDO:0005267"],"is_obsolete":false,"name":"Emery-Dreifuss muscular dystrophy 4, autosomal dominant","secondary_identifiers":["MESH:C567831","MEDGEN:414476","UMLS:C2751807","OMIM:612998","GARD:18206","DOID:0070249"],"synonyms":[{"name":"EDMD4","type":"related"},{"name":"EMERY-Dreifuss muscular dystrophy 4, autosomal dominant","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 4 with variable features","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 4, autosomal dominant","type":"exact"},{"name":"SYNE1 autosomal dominant Emery-Dreifuss muscular dystrophy","type":"exact"},{"name":"autosomal dominant Emery-Dreifuss muscular dystrophy caused by mutation in SYNE1","type":"exact"}],"termid":"MONDO:0013071","xrefs":{"Monarch":{"xref_id":"0013071"}}}


