# terms

id: GO:0007576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell aging process that results in the nucleolus breaking down into fragments.","definition_xrefs":["GOC:mah","PMID:9271578"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar fragmentation (obsolete GO:0007576)","synonyms":[{"name":"nucleolar size increase","type":"related"}],"termid":"GO:0007576"}


id: PBO:0055054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2470","termid":"PBO:0055054"}


id: MONDO:0035666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute transverse myelitis","termid":"MONDO:0015342"},{"relation_name":"is_a","term_name":"myelin oligodendrocyte glycoprotein antibody-associated disease","termid":"MONDO:1040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"acute transverse myelitis with anti-MOG antibodies","secondary_identifiers":["UMLS:C5680298","ICD10CM:G37.3","Orphanet:592873","GARD:22375","MEDGEN:1842662"],"synonyms":[{"name":"Acute transverse myelitis with anti-myelin oligodendrocyte glycoprotein antibodies","type":"exact"}],"termid":"MONDO:0035666","xrefs":{"Monarch":{"xref_id":"0035666"}}}


id: PBO:0082846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper-binding protein of mitochondrial inner membrane; required for cytochrome c oxidase activity and respiration; may function to deliver copper to cytochrome c oxidase; similar to thioredoxins; SCO1 has a paralog, SCO2, that arose from the whole genome duplication","termid":"PBO:0082846"}


id: PBO:0070299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 5","termid":"PBO:0070299"}


id: MONDO:0016562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PSP-Pure akinesia with gait freezing (PSP-PAGF) is an atypical variant of progressive supranuclear palsy (PSP), a rare late-onset neurodegenerative disease.","definition_xrefs":["Orphanet:240094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atypical progressive supranuclear palsy syndrome","termid":"MONDO:0020488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"progressive supranuclear palsy-pure akinesia with gait freezing syndrome","secondary_identifiers":["MEDGEN:1843032","GARD:20647","UMLS:C5679851"],"synonyms":[{"name":"PSP-PAGF","type":"exact"},{"name":"PSP-pure akinesia with gait freezing","type":"exact"}],"termid":"MONDO:0016562","xrefs":{"Monarch":{"xref_id":"0016562"}}}


id: PBO:0040095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosyltransferase 2B, pseudogene","termid":"PBO:0040095"}


id: MONDO:0011364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the STRC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 16","secondary_identifiers":["MESH:C566339","DOID:0110471","GARD:22597","MEDGEN:350211","UMLS:C1863561","OMIM:603720"],"synonyms":[{"name":"DFNB16","type":"narrow"},{"name":"STRC autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 16","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 16","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in STRC","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 16","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 16","type":"exact"},{"name":"deafness, autosomal recessive 16","type":"narrow"},{"name":"deafness, autosomal recessive type 16","type":"narrow"}],"termid":"MONDO:0011364","xrefs":{"Monarch":{"xref_id":"0011364"}}}


id: MONDO:1010050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital adrenal hyperplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital adrenal hyperplasia, non-human animal","secondary_identifiers":["OMIA:000017"],"termid":"MONDO:1010050","xrefs":{"Monarch":{"xref_id":"1010050"}}}


id: PBO:0082504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of i-AAA protease complex; complex is located in mitochondrial inner membrane; responsible for degradation of unfolded or misfolded mitochondrial gene products; serves as nonconventional translocation motor to pull PNPase into intermembrane space; also has role in intermembrane space protein folding; mutation causes elevated rate of mitochondrial turnover; human homolog YME1L1 can complement yeast null mutant","termid":"PBO:0082504"}


id: PBO:0069896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1187, pseudogene","termid":"PBO:0069896"}


id: PBO:0059248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L17","termid":"PBO:0059248"}


id: GO:0009637
data:
  {"annotated_genes":["SJAG_02860","SJAG_05242"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[120011,120012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a blue light stimulus. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm.","definition_xrefs":["GOC:mtg_far_red","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02860":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to blue light","references_by_uniquename":{"GO_REF:0000108":null,"PMID:23873862":null},"synonyms":[{"name":"blue light response","type":"exact"},{"name":"blue-light response","type":"exact"},{"name":"response to blue light stimulus","type":"exact"}],"termid":"GO:0009637","terms_by_termid":{"GO:0009785":null,"GO:0071483":null}}


id: MONDO:0020272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete connective tissue disease with eye involvement (obsolete MONDO:0020272)","termid":"MONDO:0020272","xrefs":{"Monarch":{"xref_id":"0020272"}}}


id: GO:0044717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-hydroxy-dADP + H2O = 8-hydroxy-dAMP + phosphate.","definition_xrefs":["PMID:22556419","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"8-hydroxy-dADP phosphatase activity","secondary_identifiers":["Reactome:R-HSA-2395965"],"termid":"GO:0044717"}


id: PBO:0084020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosylphosphatidylinositol-alpha 1,4 mannosyltransferase I; involved in GPI anchor biosynthesis, requires Pbn1p for function; homolog of mammalian PIG-M","termid":"PBO:0084020"}


id: MONDO:0009363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephaly-tall stature-joint laxity syndrome is a multiple congenital anomalies syndrome described in two sisters and characterized by the presence of hydrocephalus (onset in infancy), tall stature, joint laxity, and thoracolumbar kyphosis. There have been no further descriptions in the literature since 1989.","definition_xrefs":["Orphanet:2181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephaly-tall stature-joint laxity syndrome","secondary_identifiers":["OMIM:236660","UMLS:C1856051","SCTID:732926009","MEDGEN:383828","GARD:1666","MESH:C535770"],"synonyms":[{"name":"Daish Hardman Lamont syndrome","type":"related"},{"name":"Daish-Hardman-Lamont syndrome","type":"exact"},{"name":"hydrocephalus, tall stature, JOINT laxity, and kyphoscoliosis","type":"related"},{"name":"hydrocephalus, tall stature, joint laxity and kyphoscoliosis","type":"related"},{"name":"hydrocephaly - tall stature - joint laxity","type":"related"}],"termid":"MONDO:0009363","xrefs":{"Monarch":{"xref_id":"0009363"}}}


id: PBO:0066758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 56","termid":"PBO:0066758"}


id: PBO:0040722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL10 antisense RNA 1","termid":"PBO:0040722"}


id: PBO:0054671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2077","termid":"PBO:0054671"}


id: PR:P22194
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein phosphatase 1 regulatory subunit 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01073","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit SDS22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.12c","secondary_identifiers":["UniProtKB:P22194"],"synonyms":[{"name":"Spom972h-PPP1R7","type":"exact"}],"termid":"PR:P22194"}


id: PR:Q10415
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial intermediate peptidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11804:SF5","OMA:SCHPO00249","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.10c","secondary_identifiers":["UniProtKB:Q10415"],"synonyms":[{"name":"MIP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MIPEP","type":"exact"},{"name":"octapeptidyl aminopeptidase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10415"}


id: MONDO:0007646
data:
  {"annotated_genes":["SJAG_01231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86988],"is_not":false,"summary":null,"term":"MONDO:0007646"}]},"cv_name":"mondo","definition":"A rare peripheral neuropathy characterized by slowly progressive axonal, motor greater than sensory polyneuropathy combined with neuromytonia (including spontaneous muscular activity at rest (myokymia), impaired muscle relaxation (pseudomyotonia), and contractures of hands and feet) and neuromyotonic or myokymic discharges on needle EMG. It presents with distal lower limb weakness with gait impairment, muscle stiffness, fasciculations and cramps in hands and legs worsened by cold, decreased to absent tendon reflexes, intrinsic hand muscle atrophy and, variably, mild distal sensory impairment.","definition_xrefs":["Orphanet:324442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01231":null},"genotype_count":0,"is_obsolete":false,"name":"Gamstorp-Wohlfart syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:711406009","DOID:0050526","GARD:12353","MEDGEN:1814513","OMIM:137200","UMLS:C5700127","icd11.foundation:1738677442"],"synonyms":[{"name":"ARAN-NM","type":"exact"},{"name":"ARCMT2-NM","type":"exact"},{"name":"Gamstorp-Wohlfart syndrome","type":"exact"},{"name":"NMAN","type":"related"},{"name":"autosomal recessive Charcot-Marie-Tooth disease type 2 with neuromyotonia","type":"exact"},{"name":"autosomal recessive axonal neuropathy with neuromyotonia","type":"related"},{"name":"autosomal recessive neuromyotonia and axonal neuropathy","type":"exact"},{"name":"myokymia, myotonia and muscle wasting","type":"exact"},{"name":"myokymia, myotonia, and muscle wasting","type":"related"},{"name":"neuromyotonia and axonal neuropathy, autosomal recessive","type":"related"}],"termid":"MONDO:0007646","terms_by_termid":{"MONDO:0007646":null},"xrefs":{"Monarch":{"xref_id":"0007646"}}}


id: MONDO:0011459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any arrhythmogenic right ventricular cardiomyopathy in which the cause of the disease is a mutation in the TMEM43 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arrhythmogenic right ventricular dysplasia 5","secondary_identifiers":["MEDGEN:346805","OMIM:604400","UMLS:C1858379","MESH:C565776","DOID:0110074"],"synonyms":[{"name":"ARVC5","type":"exact"},{"name":"ARVD5","type":"exact"},{"name":"TMEM43 arrhythmogenic right ventricular cardiomyopathy","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy 5","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy caused by mutation in TMEM43","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia 5","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia type 5","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 5","type":"related"},{"name":"arrhythmogenic right ventricular dysplasia, familial, type 5","type":"exact"},{"name":"familial arrhythmogenic right ventricular dysplasia 5","type":"exact"}],"termid":"MONDO:0011459","xrefs":{"Monarch":{"xref_id":"0011459"}}}


id: GO:0036340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of hardening a chitin-based cuticle by mineral incorporation. For example, the cuticle of crustaceans is hardened by the incorporation of calcium carbonate.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin-based cuticle sclerotization","termid":"GO:0007593"},{"relation_name":"is_a","term_name":"biomineral tissue development","termid":"GO:0031214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle sclerotization by biomineralization","synonyms":[{"name":"chitin-based cuticle hardening by biomineralisation","type":"exact"}],"termid":"GO:0036340"}


id: MONDO:0011697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Waardenburg's syndrome characterized by pigmentary abnormalities of the hair, skin, and eyes, congenital sensorineural hearing loss, and absence of lateral displacement of the inner canthus of each eye that has material basis in variation in the chromosome region 8p23.","definition_xrefs":["DOID:0110951","PMID:20127975","PMID:11810298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome type 2","termid":"MONDO:0019517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 2C","secondary_identifiers":["GARD:15396","OMIM:606662","MESH:C564684","UMLS:C1847722","MEDGEN:335755"],"synonyms":[{"name":"WS2C","type":"exact"},{"name":"Waardenburg syndrome type IIC","type":"exact"},{"name":"Waardenburg syndrome, type 2C","type":"related"}],"termid":"MONDO:0011697","xrefs":{"Monarch":{"xref_id":"0011697"}}}


id: GO:0098548
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the Golgi membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"Golgi membrane","termid":"GO:0000139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of Golgi membrane","termid":"GO:0098548"}


id: MONDO:0010737
data:
  {"annotated_genes":["SJAG_03467"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86752],"is_not":false,"summary":null,"term":"MONDO:0010737"}]},"cv_name":"mondo","definition":"X-linked spondyloepiphyseal dysplasia tarda is an inherited skeletal disorder that affects males only. Physical characteristics include moderate short-stature (dwarfism); moderate to severe spinal deformities; barrel-chest; disproportionately short trunk and neck;disproportionatelylong arms,and premature osteoarthritis, especially in the hip joints. Final male adult height ranges from 4 feet 10 inches to 5 feet 6 inches. Other skeletal features of this condition include decreased mobility of the elbow and hip joints, arthritis, and abnormalities of the hip joint which causes the upper leg bones to turn inward. This condition is caused by mutations in the TRAPPC2 gene and is inherited in an X-linked recessive pattern.","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia tarda","termid":"MONDO:0019667"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia tarda, X-linked","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:4985","OMIM:313400","MEDGEN:762085","icd11.foundation:219612045","UMLS:C3541456","DOID:0080362"],"synonyms":[{"name":"SED","type":"related"},{"name":"SEDT","type":"related"},{"name":"Sed tarda, X-linked","type":"related"},{"name":"X linked spondyloepiphyseal dysplasia tarda","type":"related"},{"name":"X-linked spondyloepiphyseal dysplasia","type":"related"},{"name":"spondyloepiphyseal dysplasia tarda X-linked","type":"related"},{"name":"spondyloepiphyseal dysplasia tarda, X-linked","type":"exact"},{"name":"spondyloepiphyseal dysplasia tarda, X-linked recessive","type":"exact"},{"name":"spondyloepiphyseal dysplasia, late","type":"related"}],"termid":"MONDO:0010737","terms_by_termid":{"MONDO:0010737":null},"xrefs":{"Monarch":{"xref_id":"0010737"}}}


id: PBO:0055465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2898","termid":"PBO:0055465"}


id: PBO:0055597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3033","termid":"PBO:0055597"}


id: PBO:0041790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPZA1 pseudogene 3","termid":"PBO:0041790"}


id: PBO:0079247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 21B","termid":"PBO:0079247"}


id: PBO:0004300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family ubiquinone biosynthesis protein Abc1/Coq8","termid":"PBO:0004300"}


id: GO:0030165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a PDZ domain of a protein, a domain found in diverse signaling proteins.","definition_xrefs":["Pfam:PF00595","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"PDZ domain binding","synonyms":[{"name":"DHR-domain binding","type":"exact"},{"name":"GLGF-domain binding","type":"exact"}],"termid":"GO:0030165"}


id: GO:0001115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein-DNA-RNA complex.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex organization","termid":"GO:0043933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA-RNA complex organization","synonyms":[{"name":"protein-DNA-RNA complex subunit organisation","type":"exact"}],"termid":"GO:0001115"}


id: PBO:0060935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 4","termid":"PBO:0060935"}


id: PBO:0089963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription regulator Ncb2","termid":"PBO:0089963"}


id: MONDO:0016601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult-onset citrullinemia type I is a form of citrullinemia type I characterized clinically by adult onset of symptoms including variable hyperammonemia and less striking neurological findings which may include intense headache, scotomas, migraine-like episodes, ataxia, slurred speech, lethargy and drowsiness. Serious increased intracranial pressure may occur.","definition_xrefs":["Orphanet:247573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrullinemia type I","termid":"MONDO:0008988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"adult-onset citrullinemia type I","secondary_identifiers":["GARD:20660","NANDO:2201095"],"synonyms":[{"name":"adult-onset citrullinemia type 1","type":"exact"},{"name":"late-onset citrullinemia type 1","type":"exact"},{"name":"late-onset citrullinemia type I","type":"exact"}],"termid":"MONDO:0016601","xrefs":{"Monarch":{"xref_id":"0016601"}}}


id: PR:P53695
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exonuclease 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11081:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exodeoxyribonuclease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.05","secondary_identifiers":["UniProtKB:P53695"],"synonyms":[{"name":"EXO I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC29A10.05","type":"related"},{"name":"Spom972h-EXO1","type":"exact"},{"name":"exodeoxyribonuclease I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"exonuclease I (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P53695"}


id: PBO:0002145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, SGT2 family (predicted)","termid":"PBO:0002145"}


id: MONDO:0000755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal pregnancy in which the conception is implanted outside the endometrial cavity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectopic pregnancy","secondary_identifiers":["icd11.foundation:1563334645","ICD9:633.90","ICD9:633.8","ICD9:633","UMLS:C0032987","ICD9:633.9","MEDGEN:18618","NCIT:C34945","MESH:D011271","SCTID:34801009","DOID:0060329"],"synonyms":[{"name":"eccyesis","type":"exact"},{"name":"extrauterine pregnancy","type":"exact"},{"name":"pregnancy, ectopic","type":"exact"}],"termid":"MONDO:0000755","xrefs":{"Monarch":{"xref_id":"0000755"}}}


id: PBO:0041134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 17","termid":"PBO:0041134"}


id: PBO:0086943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras-type GTPase; required for bud site selection during both axial and bipolar budding, for morphological changes in response to mating pheromone, and for efficient cell fusion; recruits Cdc24p to the incipient bud site, activating its guanyl-nucleotide exchange factor activity and the Rho-like GTPase, Cdc42p; localizes to the plasma membrane, the incipient bud site, polarized growth sites, the cell division site and the vacuole membrane; Ras superfamily member similar to mammalian Rap GTPases","termid":"PBO:0086943"}


id: GO:0032657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate, or extent of interleukin-14 production.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of interleukin-14 production (obsolete GO:0032657)","synonyms":[{"name":"regulation of IL-14 production","type":"exact"},{"name":"regulation of interleukin-14 biosynthetic process","type":"narrow"}],"termid":"GO:0032657"}


id: PBO:0062505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily G member 7 pseudogene","termid":"PBO:0062505"}


id: SO:0001808
data:
  {"annotated_genes":["SJAG_02353","SJAG_00695","SJAG_00659","SJAG_05271","SJAG_02217"],"annotation_feature_type":"gene","cv_annotations":{"sequence":[{"annotations":[80840,80953,80977,81020,81021],"is_not":false,"summary":null,"term":"SO:0001808"}]},"cv_name":"sequence","definition":"A polypeptide region that targets a polypeptide to the mitochondrion.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00659":null,"SJAG_00695":null,"SJAG_02217":null,"SJAG_02353":null,"SJAG_05271":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"mitochondrial_targeting_signal","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"MTS","type":"exact"},{"name":"mitochondrial signal sequence","type":"exact"},{"name":"mitochondrial targeting signal","type":"exact"}],"termid":"SO:0001808","terms_by_termid":{"SO:0001808":null}}


id: PBO:0000497
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORF in compositionally biased region","termid":"PBO:0000497"}


id: MONDO:0014286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary sensory and autonomic neuropathy type 1 in which the cause of the disease is a mutation in the ATL3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy type 1","termid":"MONDO:0018213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005244","MONDO:0005066"],"is_obsolete":false,"name":"neuropathy, hereditary sensory, type 1F","secondary_identifiers":["DOID:0070154","GARD:15995","MEDGEN:816524","UMLS:C3810194","OMIM:615632"],"synonyms":[{"name":"ATL3 hereditary sensory and autonomic neuropathy type 1","type":"exact"},{"name":"HSN 1F","type":"related"},{"name":"HSN1F","type":"exact"},{"name":"hereditary sensory and autonomic neuropathy type 1 caused by mutation in ATL3","type":"exact"},{"name":"hereditary sensory neuropathy type 1F","type":"related"},{"name":"hereditary sensory neuropathy type IF","type":"exact"},{"name":"neuropathy, hereditary sensory, type 1F","type":"exact"},{"name":"neuropathy, hereditary sensory, type IF","type":"related"}],"termid":"MONDO:0014286","xrefs":{"Monarch":{"xref_id":"0014286"}}}


id: SO:0001883
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature translocation where the region contains a transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_translocation","termid":"SO:0001881"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_translocation","synonyms":[{"name":"transcript translocation","type":"exact"}],"termid":"SO:0001883"}


id: PBO:0109001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 96","termid":"PBO:0109001"}


id: PBO:0014286
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe cyclin C Homology","termid":"PBO:0014286"}


id: PR:O14086
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase I subunit RPA49 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa49 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.03c","secondary_identifiers":["UniProtKB:O14086"],"synonyms":[{"name":"DNA-directed RNA polymerase I 49 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase I subunit A49 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR1E","type":"exact"}],"termid":"PR:O14086"}


id: GO:0003346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell that have undergone an epithelial to mesenchymal transition from the epicardium into the myocardium.","definition_xrefs":["GOC:dph","PMID:18722343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cell migration to the myocardium","termid":"GO:0003346"}


id: PBO:0034460
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short,_thin_stable_microtubule_bundle","termid":"PBO:0034460"}


id: PBO:0086398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative dihydrofolate synthetase; similar to E. coli folylpolyglutamate synthetase/dihydrofolate synthetase; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; RMA1 has a paralog, FOL3, that arose from the whole genome duplication","termid":"PBO:0086398"}


id: GO:0018854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (3R)-3-isopropenyl-6-oxoheptanoate + CoA-SH + ATP = H2O + ADP/AMP + mono/diphosphate + (3R)-3-isopropenyl-6-oxoheptanoyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-isopropenyl-6-oxoheptanoyl-CoA synthetase activity (obsolete GO:0018854)","termid":"GO:0018854"}


id: GO:0017056
data:
  {"annotated_genes":["SJAG_01185","SJAG_01834","SJAG_01584","SJAG_02274","SJAG_01374","SJAG_05243","SJAG_02210","SJAG_01013","SJAG_00375","SJAG_03729","SJAG_00471","SJAG_00093","SJAG_02757","SJAG_03182","SJAG_04148","SJAG_04645","SJAG_03300","SJAG_00962","SJAG_01065","SJAG_04017","SJAG_03299","SJAG_03593","SJAG_03986"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62099,69902,70776,70945,73125,73198,73547,73998,74848,75512,75818,76057,76454,76745,77323,77849,79016,80363,80683,80750,94321,96461,115940],"is_not":false,"summary":null,"term":"GO:0017056"}]},"cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the nuclear pore complex, a protein-lined channel in the nuclear envelope that allows the transfer of macromolecules.","definition_xrefs":["GOC:mah","PMID:25802992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00962":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01584":null,"SJAG_01834":null,"SJAG_02210":null,"SJAG_02274":null,"SJAG_02757":null,"SJAG_03182":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03593":null,"SJAG_03729":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04148":null,"SJAG_04645":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of nuclear pore","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6783483","Reactome:R-HSA-170796","Reactome:R-HSA-5252041","Reactome:R-HSA-1176059","Reactome:R-HSA-5661474","GO:0005487","Reactome:R-HSA-5578744","Reactome:R-HSA-192925","Reactome:R-HSA-192627"],"synonyms":[{"name":"nuclear pore activity","type":"related"},{"name":"nucleocytoplasmic transporter activity","type":"exact"}],"termid":"GO:0017056","terms_by_termid":{"GO:0017056":null}}


id: PBO:0085414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane sulfite pump involved in sulfite metabolism; required for efficient sulfite efflux; major facilitator superfamily protein","termid":"PBO:0085414"}


id: PBO:0062288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily L member 1","termid":"PBO:0062288"}


id: PBO:0057744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1539","termid":"PBO:0057744"}


id: MONDO:1012005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alloimmune hemolytic anemia of the newborn, non-human animal","termid":"MONDO:1011684"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alloimmune hemolytic anemia of the newborn, dog","secondary_identifiers":["OMIA:000028-9615"],"termid":"MONDO:1012005","xrefs":{"Monarch":{"xref_id":"1012005"}}}


id: FYPO:0004776
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-threonine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular threonine level","termid":"FYPO:0001565"},{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased vacuolar threonine level","synonyms":[{"name":"increased level of threonine in vacuole","type":"exact"},{"name":"increased vacuolar L-threonine level","type":"exact"},{"name":"increased vacuolar threonine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar threonine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004776"}


id: MONDO:0004913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"esotropia","termid":"MONDO:0004896"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternating esotropia","secondary_identifiers":["UMLS:C0152205","ICD9:378.05","DOID:9888","ICD10CM:H50.05","icd11.foundation:935468618","SCTID:39837002","MEDGEN:57515"],"termid":"MONDO:0004913","xrefs":{"Monarch":{"xref_id":"0004913"}}}


id: GO:0015537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: xanthosine(out) + H+(out) = xanthosine(in) + H+(in).","definition_xrefs":["TC:2.A.1.10.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside:proton symporter activity","termid":"GO:0015506"},{"relation_name":"is_a","term_name":"xanthosine transmembrane transporter activity","termid":"GO:0015553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"xanthosine:proton symporter activity","synonyms":[{"name":"xanthosine permease activity","type":"related"},{"name":"xanthosine:hydrogen ion symporter activity","type":"exact"}],"termid":"GO:0015537"}


id: MONDO:0006795
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Overactive functioning of the spleen, resulting in excessive destruction of blood cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splenic disorder","termid":"MONDO:0002332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"hypersplenism","secondary_identifiers":["icd11.foundation:2093549625","NCIT:C34714","MEDGEN:9372","NANDO:2200637","SCTID:58381000","MedDRA:10020769","UMLS:C0020532","HP:0001971","MESH:D006971","ICD9:289.4","DOID:6376","EFO:1000975","ICD10CM:D73.1"],"synonyms":[{"name":"hypersplenia","type":"exact"},{"name":"hypersplenism","type":"exact"},{"name":"hypersplenism (disease)","type":"exact"}],"termid":"MONDO:0006795","xrefs":{"Monarch":{"xref_id":"0006795"}}}


id: PBO:0091220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acyl DHAP reductase Ayr2","termid":"PBO:0091220"}


id: MONDO:0100172
data:
  {"annotated_genes":["SJAG_01778","SJAG_01146","SJAG_02920","SJAG_03747","SJAG_04179","SJAG_05313","SJAG_02165","SJAG_00170","SJAG_00554","SJAG_00210","SJAG_02282","SJAG_03681","SJAG_00741","SJAG_03698","SJAG_03353","SJAG_00773","SJAG_01900","SJAG_02218","SJAG_02180","SJAG_03418","SJAG_01926","SJAG_05349","SJAG_01400","SJAG_00800","SJAG_01991","SJAG_04755","SJAG_04157","SJAG_02629","SJAG_01851","SJAG_02286","SJAG_04980","SJAG_02873","SJAG_03041","SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014558"},{"annotations":[85571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030914"},{"annotations":[86255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013578"},{"annotations":[85610,85609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014602"},{"annotations":[87337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032823"},{"annotations":[86861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032485"},{"annotations":[87191],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015022"},{"annotations":[86850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0023657"},{"annotations":[87271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030891"},{"annotations":[85434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0029465"},{"annotations":[85921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859333"},{"annotations":[86681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957397"},{"annotations":[86695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957536"},{"annotations":[86442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958203"},{"annotations":[86784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"},{"annotations":[86507,86508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013266"},{"annotations":[85632,85630,85631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014617"},{"annotations":[85958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014842"},{"annotations":[85970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014855"},{"annotations":[85715,85716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030912"},{"annotations":[85452,85453],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030916"},{"annotations":[85450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030917"},{"annotations":[85424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030921"},{"annotations":[85430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030922"},{"annotations":[86677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020847"},{"annotations":[86168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013656"},{"annotations":[86565,86564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011053"},{"annotations":[85875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011213"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal 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id: MONDO:0021211
data:
  {"annotated_genes":["SJAG_00579","SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[87670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007959"}]},"cv_name":"mondo","definition":"A neoplasm (disease) that involves the brain.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"central nervous system neoplasm","termid":"MONDO:0006130"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00579":null,"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"brain neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C2907","EFO:0003833","UMLS:C0006118","MEDGEN:14216"],"synonyms":[{"name":"brain neoplasm (disease)","type":"exact"},{"name":"brain neoplasms","type":"exact"},{"name":"brain tumor","type":"exact"},{"name":"brain tumour","type":"exact"},{"name":"neoplasm of brain","type":"exact"},{"name":"neoplasm of the brain","type":"exact"},{"name":"tumor of brain","type":"exact"},{"name":"tumor of the Brain","type":"exact"},{"name":"tumour of brain","type":"exact"},{"name":"tumour of the Brain","type":"exact"}],"termid":"MONDO:0021211","terms_by_termid":{"MONDO:0007959":null,"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0021211"}}}


id: PBO:0027027
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id: PBO:0000101
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id: GO:0005840
data:
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id: GO:0070681
data:
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id: PBO:0030655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_amiloride","termid":"PBO:0030655"}


id: PBO:0068958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 202, pseudogene","termid":"PBO:0068958"}


id: PBO:0078454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 6 (pseudogene)","termid":"PBO:0078454"}


id: PBO:0091854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk25","termid":"PBO:0091854"}


id: GO:0072032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the S2 portion of the proximal convoluted tubule over time, from its formation to the mature structure. The S2 portion of the tubule is involved in reabsorption of water and sodium chloride.","definition_xrefs":["MA:0002613","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"proximal convoluted tubule development","termid":"GO:0072019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal convoluted tubule segment 2 development","synonyms":[{"name":"S2 development","type":"exact"}],"termid":"GO:0072032"}


id: MONDO:0016712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classic medulloblastoma is a histological variant of medulloblastoma, an embryonic malignancy, having a midline location, occurring most often in children and manifesting with variable symptoms such as headaches, nausea, vomiting and ataxia.","definition_xrefs":["Orphanet:251867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"classic medulloblastoma","secondary_identifiers":["UMLS:C1707400","icd11.foundation:1548011794","NCIT:C54039","SCTID:699704002","GARD:17216","MEDGEN:353541"],"synonyms":[{"name":"classic medulloblastoma","type":"exact"}],"termid":"MONDO:0016712","xrefs":{"Monarch":{"xref_id":"0016712"}}}


id: PBO:0081808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 1, Y-linked","termid":"PBO:0081808"}


id: GO:0002277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a myeloid dendritic cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid dendritic cell activation","termid":"GO:0001773"},{"relation_name":"is_a","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell activation involved in immune response","synonyms":[{"name":"myeloid dendritic cell activation during immune response","type":"related"}],"termid":"GO:0002277"}


id: PATO:0002339
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of being covered with stiff or rough hairs.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy","termid":"PATO:0000454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hispid","termid":"PATO:0002339"}


id: PBO:0046281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastin microfibril interfacer 3","termid":"PBO:0046281"}


id: PBO:0066753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 51","termid":"PBO:0066753"}


id: GO:0048519
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id: FYPO:0006899
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id: FYECO:0000253
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id: PBO:0045825
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id: GO:0103032
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id: PR:O74925
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id: GO:0006337
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id: GO:2000820
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id: PBO:0052757
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id: GO:0018564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9H-carbazole + H+ + NAD(P)H + O2 = 2'-aminobiphenyl-2,3-diol + NAD(P)+.","definition_xrefs":["EC:1.14.12.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carbazole 1,9a-dioxygenase [NAD(P)H] activity","secondary_identifiers":["UM-BBD_reactionID:r0456"],"synonyms":[{"name":"CARDO","type":"exact"},{"name":"carbazole 1,9alpha-dioxygenase activity","type":"exact"}],"termid":"GO:0018564"}


id: GO:0060093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the frequency, rate or extent of glycinergic synaptic transmission. Glycinergic synaptic transmission is the process of communication from a neuron to another neuron across a synapse using the neurotransmitter glycine.","definition_xrefs":["GOC:dph","GOC:dms"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission","termid":"GO:0050805"},{"relation_name":"is_a","term_name":"regulation of synaptic transmission, glycinergic","termid":"GO:0060092"},{"relation_name":"negatively_regulates","term_name":"synaptic transmission, glycinergic","termid":"GO:0060012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of synaptic transmission, glycinergic","synonyms":[{"name":"negative regulation of glycinergic synaptic transmission","type":"exact"}],"termid":"GO:0060093"}


id: MONDO:0800132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disorder characterized by severe anemia and thrombocytopenia apparent from early infancy, hepatosplenomegaly, and recurrent fevers associated with a hyperinflammatory state. Additional systemic features may include chronic diarrhea, proteinuria with renal disease, liver fibrosis with elevated liver enzymes, deforming arthropathy, and vasculitic skin lesions. Some patients may have motor delay or learning difficulties associated with subcortical white matter lesions on brain imaging. Laboratory studies show increased levels of proinflammatory cytokines and increased expression of interferon-stimulated genes (ISGs), consistent with a type I interferonopathy.","definition_xrefs":["OMIM:619858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory-pancytopenia syndrome due to DNASE2 deficiency","secondary_identifiers":["MEDGEN:1803642","UMLS:C5676977"],"termid":"MONDO:0800132","xrefs":{"Monarch":{"xref_id":"0800132"}}}


id: GO:0033527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next, from other compounds, including glycine and succinyl-CoA.","definition_xrefs":["MetaCyc:PWY-5189","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinyl-CoA metabolic process","termid":"GO:0006104"},{"relation_name":"is_a","term_name":"glycine metabolic process","termid":"GO:0006544"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0008150","GO:0033013","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"tetrapyrrole biosynthetic process from glycine and succinyl-CoA","synonyms":[{"name":"tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"}],"termid":"GO:0033527"}


id: PBO:0040622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF1 pseudogene 1","termid":"PBO:0040622"}


id: PBO:0047192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 209 member B","termid":"PBO:0047192"}


id: MONDO:0017045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuroectodermal-endocrine syndrome is characterized by a combination of endocrine and neuroectodermal abnormalities, including low growth hormone levels, delayed puberty, type II diabetes mellitus, mild intellectual deficit, sensorineural deafness, characteristic facial appearance and alopecia. It has been described in four sibs from Myanmar.","definition_xrefs":["Orphanet:2676"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"polyendocrinopathy","termid":"MONDO:0015126"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroectodermal-endocrine syndrome","secondary_identifiers":["SCTID:724090001","GARD:3959"],"synonyms":[{"name":"Oerter-Friedman-Anderson syndrome","type":"exact"},{"name":"neuroectodermal endocrine syndrome","type":"related"}],"termid":"MONDO:0017045","xrefs":{"Monarch":{"xref_id":"0017045"}}}


id: PBO:0091285
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMtor","termid":"PBO:0091285"}


id: FYPO:0005040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of the serine residue at position 2 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["GO:0071620","PomBase:mah","PMID:22144909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen starvation","synonyms":[{"name":"normal phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during nitrogen deprivation","type":"exact"},{"name":"normal phosphorylation of RNA polymerase II CTD serine 2 residues during nitrogen depletion","type":"exact"}],"termid":"FYPO:0005040"}


id: GO:1903069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.","definition_xrefs":["PMID:17872946","GOC:rph","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ER-associated ubiquitin-dependent protein catabolic process (obsolete GO:1903069)","termid":"GO:1903069"}


id: SO:1000066
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation causing a disruption of the translational reading frame, due to the insertion of a nucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000066 sequence_variant_causing_plus_1_frameshift_mutation (obsolete SO:1000066)","synonyms":[{"name":"plus 1 frameshift mutation","type":"exact"},{"name":"sequence variant causing plus 1 frameshift mutation","type":"exact"}],"termid":"SO:1000066"}


id: PBO:0045681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain LC8-type 1 pseudogene 1","termid":"PBO:0045681"}


id: PBO:0077657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 9","termid":"PBO:0077657"}


id: GO:0061528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of aspartate by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"},{"relation_name":"is_a","term_name":"acidic amino acid transport","termid":"GO:0015800"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"aspartate secretion","termid":"GO:0061528"}


id: GO:1901358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-D-galactofuranose.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose biosynthetic process","termid":"GO:0046369"},{"relation_name":"is_a","term_name":"beta-D-galactofuranose metabolic process","termid":"GO:1901356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"beta-D-galactofuranose biosynthetic process","synonyms":[{"name":"beta-D-galactofuranose anabolism","type":"exact"},{"name":"beta-D-galactofuranose biosynthesis","type":"exact"},{"name":"beta-D-galactofuranose formation","type":"exact"},{"name":"beta-D-galactofuranose synthesis","type":"exact"}],"termid":"GO:1901358"}


id: MONDO:0010503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bartter syndrome in which the cause of the disease is a mutation in the MAGED2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bartter syndrome","termid":"MONDO:0015231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Bartter disease type 5","secondary_identifiers":["OMIM:300971","Orphanet:570371","UMLS:C4310820","DOID:0110147","GARD:22308","MEDGEN:934787"],"synonyms":[{"name":"BARTS5","type":"exact"},{"name":"Bartter syndrome caused by mutation in MAGED2","type":"exact"},{"name":"Bartter syndrome, type 5, antenatal, transient","type":"exact"},{"name":"Bartter syndrome, type 5, antenatal, transient, X-linked recessive","type":"exact"},{"name":"MAGED2 Bartter syndrome","type":"exact"}],"termid":"MONDO:0010503","xrefs":{"Monarch":{"xref_id":"0010503"}}}


id: MONDO:0020354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coloboma of choroid and retina is a rare, genetic developmental defect during embryogenesis characterized by the partial absence of retinal pigment epithelium and choroid, most frequently located in the inferonasal quadrant. Patients usually present reduced vision and have an increased risk for retinal detachment. Other ocular anomalies (e.g. coloboma of iris, microcornea, nystagmus, strabismus, microphthalmos) are usually associated, however it may also be isolated.","definition_xrefs":["Orphanet:98942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coloboma, ocular, autosomal dominant","termid":"MONDO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"coloboma of choroid and retina","secondary_identifiers":["GARD:16875","MEDGEN:1643994","icd11.foundation:20223105","UMLS:C4708599","SCTID:39302008"],"synonyms":[{"name":"choroidal coloboma","type":"related"},{"name":"retinal coloboma","type":"related"},{"name":"retinochoroidal coloboma","type":"related"}],"termid":"MONDO:0020354","xrefs":{"Monarch":{"xref_id":"0020354"}}}


id: GO:0044037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving macromolecules forming, or destined to form, part of a cell wall, involving more than one organism. A cell wall is a rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.","definition_xrefs":["GOC:mah","GOC:tair_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism cell wall macromolecule metabolic process (obsolete GO:0044037)","synonyms":[{"name":"multi-organism cell wall macromolecule metabolism","type":"exact"}],"termid":"GO:0044037"}


id: PBO:0072376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 2","termid":"PBO:0072376"}


id: MONDO:0020174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A precancerous condition that involves the skin of eyelid.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete precancerous lesion of palpebral epidermis (obsolete MONDO:0020174)","secondary_identifiers":["Orphanet:98583"],"synonyms":[{"name":"skin of eyelid precancerous condition","type":"exact"}],"termid":"MONDO:0020174","xrefs":{"Monarch":{"xref_id":"0020174"}}}


id: GO:0005109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a frizzled (fz) receptor.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"frizzled binding","secondary_identifiers":["GO:0005110"],"synonyms":[{"name":"frizzled ligand","type":"narrow"},{"name":"frizzled-2 binding","type":"narrow"},{"name":"frizzled-2 ligand","type":"narrow"},{"name":"fz binding","type":"exact"},{"name":"fz ligand","type":"narrow"},{"name":"fz2 binding","type":"narrow"},{"name":"fz2 ligand","type":"narrow"}],"termid":"GO:0005109"}


id: FYPO:0007321
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal stress granule assembly during vegetative growth","termid":"FYPO:0002347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased stress granule assembly during vegetative growth","synonyms":[{"name":"decreased cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"decreased stress granule assembly during mitotic cell cycle","type":"related"},{"name":"decreased stress granule formation during vegetative growth","type":"exact"},{"name":"reduced stress granule assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007321"}


id: MONDO:0007800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monosomy 18p refers to a chromosomal disorder resulting from the deletion of all or part of the short arm of chromosome 18.","definition_xrefs":["Orphanet:1598"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of chromosome 18","termid":"MONDO:0016880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18p deletion syndrome","secondary_identifiers":["GARD:8631","NCIT:C84521","OMIM:146390","UMLS:C0432442","ICD9:758.39","icd11.foundation:121037615","Orphanet:261974","MEDGEN:96604","MESH:C538309","SCTID:270890001","DOID:0060406"],"synonyms":[{"name":"18p syndrome","type":"exact"},{"name":"18p-","type":"exact"},{"name":"De Grouchy syndrome","type":"exact"},{"name":"chromosome 18p deletion","type":"exact"},{"name":"chromosome 18p deletion syndrome","type":"exact"},{"name":"deletion 18p syndrome","type":"exact"},{"name":"monosomy 18p","type":"exact"},{"name":"monosomy type 18p","type":"exact"},{"name":"partial deletion of chromosome 18p","type":"exact"},{"name":"partial deletion of the short arm of chromosome 18","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 18","type":"exact"},{"name":"partial monosomy of chromosome 18p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 18","type":"exact"}],"termid":"MONDO:0007800","xrefs":{"Monarch":{"xref_id":"0007800"}}}


id: PBO:0017842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione transmembrane transporter Pgt1","termid":"PBO:0017842"}


id: PBO:0065376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 4","termid":"PBO:0065376"}


id: GO:0061270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of intraglomerular glomerular mesangium cells in the mesonephros by cell division, resulting in the expansion of their population. Intraglomerular mesangial cells are specialized pericytes located among the glomerular capillaries within a renal corpuscle of a kidney. They are required for filtration, structural support and phagocytosis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric glomerular mesangial cell proliferation involved in mesonephros development","termid":"GO:0061269"},{"relation_name":"is_a","term_name":"intraglomerular mesangial cell proliferation","termid":"GO:0072123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric intraglomerular mesangial cell proliferation","termid":"GO:0061270"}


id: GO:0047081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + NADPH + H+ + 3-hydroxy-2-methylpyridine-5-carboxylate = NADP+ + 2-(acetamidomethylene)succinate.","definition_xrefs":["EC:1.14.13.242","MetaCyc:1.14.12.4-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-hydroxy-2-methylpyridinecarboxylate dioxygenase activity","secondary_identifiers":["RHEA:10864"],"synonyms":[{"name":"2-methyl-3-hydroxypyridine 5-carboxylic acid dioxygenase activity","type":"related"},{"name":"3-hydroxy-2-methylpyridine-5-carboxylate,NADPH:oxygen oxidoreductase (decyclizing)","type":"related"},{"name":"3-hydroxy-3-methylpyridinecarboxylate dioxygenase activity","type":"related"},{"name":"methylhydroxypyridine carboxylate dioxygenase activity","type":"related"},{"name":"methylhydroxypyridinecarboxylate oxidase activity","type":"related"}],"termid":"GO:0047081"}


id: MONDO:0036218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia, hypotonia, and respiratory insufficiency syndrome, neonatal lethal","termid":"MONDO:0032931"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal pontocerebellar hypoplasia-hypotonia-respiratory insufficiency syndrome due to biallelic deletions in the ATAD3 gene cluster","secondary_identifiers":["Orphanet:615986","UMLS:C5680385","GARD:18037","MEDGEN:1843311"],"synonyms":[{"name":"Lethal 1p36.33 deletion syndrome","type":"exact"}],"termid":"MONDO:0036218","xrefs":{"Monarch":{"xref_id":"0036218"}}}


id: PBO:0088216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTA-like protein","termid":"PBO:0088216"}


id: GO:0106213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which outer kinetochore components delocalize from the centromere, contributing to the rearrangement of chromosomes into the orientation characteristic of meiotic prophase I.","definition_xrefs":["PMID:27611693","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"kinetochore disassembly involved in meiotic chromosome organization","synonyms":[{"name":"kinetochore disassembly from spindle pole body involved in chromosome organization involved in meiotic cell cycle","type":"exact"}],"termid":"GO:0106213"}


id: MOD:00725
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a carbohydrate-like group linked through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"complex glycosylation","termid":"MOD:00725"}


id: PBO:0081091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC20 intronic transcript 1","termid":"PBO:0081091"}


id: GO:1900858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of brevianamide F biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of brevianamide F biosynthetic process (obsolete GO:1900858)","synonyms":[{"name":"regulation of brevianamide F anabolism","type":"exact"},{"name":"regulation of brevianamide F biosynthesis","type":"exact"},{"name":"regulation of brevianamide F formation","type":"exact"},{"name":"regulation of brevianamide F synthesis","type":"exact"}],"termid":"GO:1900858"}


id: GO:0000726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A DNA repair process in which that does not require the exchange of genetic material between the broken DNA molecule and a homologous DNA region.","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete non-recombinational repair (obsolete GO:0000726)","termid":"GO:0000726"}


id: MONDO:0859331
data:
  {"annotated_genes":["SJAG_02873"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85922],"is_not":false,"summary":null,"term":"MONDO:0859331"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02873":null},"genotype_count":0,"is_obsolete":false,"name":"Rabin-Pappas syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1824042","OMIM:620155","UMLS:C5774269"],"termid":"MONDO:0859331","terms_by_termid":{"MONDO:0859331":null},"xrefs":{"Monarch":{"xref_id":"0859331"}}}


id: GO:0097270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The temporary recovery of response to a stimulus when a novel stimulus is added.","definition_xrefs":["Wikipedia:Habituation","GOC:kmv","PMID:11390637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nonassociative learning","termid":"GO:0046958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dishabituation","termid":"GO:0097270"}


id: PBO:0056935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1-2","termid":"PBO:0056935"}


id: PBO:0047768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOSL2 antisense RNA 1","termid":"PBO:0047768"}


id: PATO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having only one phase or stage.","definition_xrefs":["hefreedictionary.com:hefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phase","termid":"PATO:0000083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monophasic","termid":"PATO:0001773"}


id: PBO:0017886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine family transmembrane transporter (predicted)","termid":"PBO:0017886"}


id: FYPO:0004073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to a pheromone occurs in G1 phase, but begins only after the cells have undergone two rounds of cell division in the presence of the pheromone.","definition_xrefs":["PMID:9034336","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to pheromone","termid":"FYPO:0004074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"two cell divisions prior to cell cycle arrest in mitotic G1 phase in response to pheromone","synonyms":[{"name":"two cell divisions prior to cell cycle arrest in mitotic G1 phase during cellular response to pheromone","type":"exact"},{"name":"two cell divisions prior to mitotic G1 arrest in response to pheromone","type":"exact"},{"name":"two cell divisions prior to mitotic cell cycle arrest in G1 phase in response to pheromone","type":"exact"},{"name":"two cell divisions prior to pheromone-induced G1 arrest","type":"exact"}],"termid":"FYPO:0004073"}


id: PATO:0001604
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A life span which is relatively low.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"life span","termid":"PATO:0000050"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased life span","synonyms":[{"name":"low life span","type":"exact"}],"termid":"PATO:0001604"}


id: PBO:0039857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP22 intronic transcript 1","termid":"PBO:0039857"}


id: GO:0044834
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tetramer of retroviral integrase subunits tightly associated with a pair of viral DNA ends. Functions to insert viral DNA into a host cell chromosome.","definition_xrefs":["PMID:20118915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"retroviral intasome","termid":"GO:0044834"}


id: MONDO:1010420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narcolepsy that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"narcolepsy, non-human animal","termid":"MONDO:1010003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"narcolepsy, horse","secondary_identifiers":["OMIA:000703-9796"],"termid":"MONDO:1010420","xrefs":{"Monarch":{"xref_id":"1010420"}}}


id: GO:0002429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of a cell, leading to the activation or perpetuation of an immune response.","definition_xrefs":["GO_REF:0000022","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-activating signaling pathway","termid":"GO:0002757"},{"relation_name":"is_a","term_name":"immune response-regulating cell surface receptor signaling pathway","termid":"GO:0002768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"immune response-activating cell surface receptor signaling pathway","synonyms":[{"name":"activation of immune response by cell surface receptor signaling pathway","type":"exact"},{"name":"immune response-activating cell surface receptor signalling pathway","type":"exact"}],"termid":"GO:0002429"}


id: GO:0007500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"mesodermal cell fate commitment","termid":"GO:0001710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesodermal cell fate determination","synonyms":[{"name":"mesoderm cell fate determination","type":"exact"}],"termid":"GO:0007500"}


id: GO:0015368
data:
  {"annotated_genes":["SJAG_04096","SJAG_04698","SJAG_04028"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91529,78692,70569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015369"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + cation(out) = Ca2+(out) + cation(in).","definition_xrefs":["TC:2.A.19.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transmembrane transporter activity","termid":"GO:0015085"},{"relation_name":"is_a","term_name":"metal cation:monoatomic cation antiporter activity","termid":"GO:0140828"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04028":null,"SJAG_04096":null,"SJAG_04698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"calcium:monoatomic cation antiporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-425822"],"synonyms":[{"name":"calcium:cation antiporter activity","type":"broad"}],"termid":"GO:0015368","terms_by_termid":{"GO:0015369":null}}


id: PBO:0004156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor, SYF2 family (predicted)","termid":"PBO:0004156"}


id: PBO:0086847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative quinone oxidoreductase; overexpression improves ethanol production and acid stress resistance; involved in copper metabolism; similar to Cochliobolus carbonum toxD gene","termid":"PBO:0086847"}


id: PBO:0060071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 18","termid":"PBO:0060071"}


id: PBO:0076063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm tail PG-rich repeat containing 1","termid":"PBO:0076063"}


id: PBO:0058063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4283-1","termid":"PBO:0058063"}


id: GO:0008315
data:
  {"annotated_genes":["SJAG_00364","SJAG_04287","SJAG_03854","SJAG_04280","SJAG_02771","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106979,116446,91757],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033315"},{"annotations":[78822,70986],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0110031"},{"annotations":[73897],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0110032"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from meiotic G2 phase to M phase of meiosis I.","definition_xrefs":["PMID:15084480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase transition","termid":"GO:0044771"},{"relation_name":"is_a","term_name":"cell cycle G2/M phase transition","termid":"GO:0044839"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02771":null,"SJAG_03854":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"G2/MI transition of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"meiotic G2/MI phase transition","type":"exact"},{"name":"meiotic G2/MI transition","type":"exact"},{"name":"meiotic cell cycle G2/MI phase transition","type":"exact"}],"termid":"GO:0008315","terms_by_termid":{"GO:0033315":null,"GO:0110031":null,"GO:0110032":null}}


id: GO:0034007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + H2O = (S)-linalool + diphosphate.","definition_xrefs":["RHEA:24116","EC:4.2.3.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"S-linalool synthase activity","secondary_identifiers":["KEGG_REACTION:R07631","MetaCyc:4.2.3.25-RXN"],"synonyms":[{"name":"3S-linalool synthase activity","type":"related"},{"name":"LIS","type":"related"},{"name":"geranyl-diphosphate diphosphate-lyase [(3S)-linalool-forming] activity","type":"related"}],"termid":"GO:0034007"}


id: PBO:0091508
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pre-TRNA Accumulation","termid":"PBO:0091508"}


id: GO:0005047
data:
  {"annotated_genes":["SJAG_03841","SJAG_01759","SJAG_00360","SJAG_00681","SJAG_01558"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71040,71629,72805,80069,94612],"is_not":false,"summary":null,"term":"GO:0005047"}]},"cv_name":"molecular_function","definition":"Binding to a signal recognition particle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00360":null,"SJAG_00681":null,"SJAG_01558":null,"SJAG_01759":null,"SJAG_03841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"signal recognition particle binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"docking protein","type":"broad"},{"name":"signal recognition particle receptor","type":"narrow"}],"termid":"GO:0005047","terms_by_termid":{"GO:0005047":null}}


id: GO:0035113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the appendage are generated and organized. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage morphogenesis","termid":"GO:0035107"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic appendage morphogenesis","termid":"GO:0035113"}


id: PATO:0000641
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000641 deposition defective (obsolete PATO:0000641)","termid":"PATO:0000641"}


id: GO:0075164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G-protein beta subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-protein beta subunit-mediated signal transduction in response to host (obsolete GO:0075164)","synonyms":[{"name":"negative regulation of symbiont G-protein beta subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075164"}


id: GO:1903792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anion transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11336802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"is_a","term_name":"regulation of monoatomic anion transport","termid":"GO:0044070"},{"relation_name":"negatively_regulates","term_name":"monoatomic anion transport","termid":"GO:0006820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of monoatomic anion transport","synonyms":[{"name":"down regulation of anion transport","type":"exact"},{"name":"down-regulation of anion transport","type":"exact"},{"name":"downregulation of anion transport","type":"exact"},{"name":"inhibition of anion transport","type":"narrow"},{"name":"negative regulation of anion transport","type":"broad"}],"termid":"GO:1903792"}


id: GO:0060798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a transforming growth factor beta receptor binding to one of its physiological ligands and ultimately resulting in the specification of a mesodermal fate.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in mesodermal cell fate specification (obsolete GO:0060798)","synonyms":[{"name":"transforming growth factor beta receptor signalling pathway involved in mesodermal cell fate specification","type":"exact"}],"termid":"GO:0060798"}


id: GO:0003180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the aortic valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve morphogenesis","termid":"GO:0003179"},{"relation_name":"part_of","term_name":"aortic valve development","termid":"GO:0003176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aortic valve morphogenesis","termid":"GO:0003180"}


id: PBO:0047555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 12","termid":"PBO:0047555"}


id: PBO:0075975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 1","termid":"PBO:0075975"}


id: FYPO:0001103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of hydrogen peroxide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to hydrogen peroxide","synonyms":[{"name":"resistance to H2O2","type":"exact"},{"name":"resistance to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"resistance to hydrogen peroxide during vegetative growth","type":"exact"},{"name":"resistant to hydrogen peroxide","type":"exact"}],"termid":"FYPO:0001103"}


id: PATO:0002179
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards to point of attachment or origin.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalised proximally","termid":"PATO:0002179"}


id: GO:0006551
data:
  {"annotated_genes":["SJAG_03985","SJAG_03243","SJAG_03562","SJAG_06635","SJAG_02841","SJAG_00396","SJAG_04149","SJAG_04098"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111474],"is_not":false,"summary":null,"term":"GO:0006551"},{"annotations":[103637,59378,80276,113638,75182,91011,77290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-leucine, 2-amino-4-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate family amino acid metabolic process","termid":"GO:0009078"},{"relation_name":"is_a","term_name":"branched-chain amino acid metabolic process","termid":"GO:0009081"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00396":null,"SJAG_02841":null,"SJAG_03243":null,"SJAG_03562":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-leucine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"L-leucine metabolism","type":"exact"},{"name":"leucine metabolic process","type":"broad"}],"termid":"GO:0006551","terms_by_termid":{"GO:0006551":null,"GO:0009098":null}}


id: PBO:0012055
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpb3 was previously considered to be SPAC17G8.03c but this new gene product appears to be the true ortholog of DPB3/POLE4 see Treefam:TF103009","termid":"PBO:0012055"}


id: MONDO:0007777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotaurinemic retinal degeneration and cardiomyopathy","secondary_identifiers":["MEDGEN:1779589","MESH:C564157","OMIM:145350","UMLS:C5542181"],"synonyms":[{"name":"hypotaurinemic retinal degeneration and cardiomyopathy","type":"exact"}],"termid":"MONDO:0007777","xrefs":{"Monarch":{"xref_id":"0007777"}}}


id: GO:0033326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of cerebrospinal fluid (CSF) from the choroid plexus of the lateral, third and fourth ventricles. The cerebrospinal fluid is a clear liquid that located within the ventricles, spinal canal, and subarachnoid spaces.","definition_xrefs":["GOC:ln","PMID:10716451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"cerebrospinal fluid secretion","synonyms":[{"name":"CSF secretion","type":"exact"}],"termid":"GO:0033326"}


id: GO:0140840
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) cis-proline (omega=180) (position 6) = RNA polymerase II large subunit trans-proline (omega=0) (position 6).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat peptidyl-prolyl isomerase activity","termid":"GO:0140838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat P6 isomerase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain P6 isomerase activity","type":"exact"}],"termid":"GO:0140840"}


id: MONDO:0020363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"honey-droplet corneal dystrophy","secondary_identifiers":["MEDGEN:573075","Orphanet:98958","UMLS:C0339300","GARD:19609","icd11.foundation:896313309"],"termid":"MONDO:0020363","xrefs":{"Monarch":{"xref_id":"0020363"}}}


id: GO:0042064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cell adhesion receptor regulator activity (obsolete GO:0042064)","synonyms":[{"name":"cell adhesion receptor regulator activity","type":"exact"}],"termid":"GO:0042064"}


id: PBO:0033819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Srp2","termid":"PBO:0033819"}


id: GO:1904650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fat cell apoptotic process.","definition_xrefs":["PMID:17024416","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of fat cell apoptotic process","termid":"GO:1904649"},{"relation_name":"negatively_regulates","term_name":"fat cell apoptotic process","termid":"GO:1904606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fat cell apoptotic process","synonyms":[{"name":"down regulation of adipocyte apoptosis","type":"narrow"},{"name":"down regulation of adipocyte apoptotic process","type":"exact"},{"name":"down regulation of adipose cell apoptosis","type":"narrow"},{"name":"down regulation of adipose cell apoptotic process","type":"exact"},{"name":"down regulation of fat cell apoptosis","type":"narrow"},{"name":"down regulation of fat cell apoptotic process","type":"exact"},{"name":"down-regulation of adipocyte apoptosis","type":"narrow"},{"name":"down-regulation of adipocyte apoptotic process","type":"exact"},{"name":"down-regulation of adipose cell apoptosis","type":"narrow"},{"name":"down-regulation of adipose cell apoptotic process","type":"exact"},{"name":"down-regulation of fat cell apoptosis","type":"narrow"},{"name":"down-regulation of fat cell apoptotic process","type":"exact"},{"name":"downregulation of adipocyte apoptosis","type":"narrow"},{"name":"downregulation of adipocyte apoptotic process","type":"exact"},{"name":"downregulation of adipose cell apoptosis","type":"narrow"},{"name":"downregulation of adipose cell apoptotic process","type":"exact"},{"name":"downregulation of fat cell apoptosis","type":"narrow"},{"name":"downregulation of fat cell apoptotic process","type":"exact"},{"name":"inhibition of adipocyte apoptosis","type":"narrow"},{"name":"inhibition of adipocyte apoptotic process","type":"narrow"},{"name":"inhibition of adipose cell apoptosis","type":"narrow"},{"name":"inhibition of adipose cell apoptotic process","type":"narrow"},{"name":"inhibition of fat cell apoptosis","type":"narrow"},{"name":"inhibition of fat cell apoptotic process","type":"narrow"},{"name":"negative regulation of adipocyte apoptosis","type":"narrow"},{"name":"negative regulation of adipocyte apoptotic process","type":"exact"},{"name":"negative regulation of adipose cell apoptosis","type":"narrow"},{"name":"negative regulation of adipose cell apoptotic process","type":"exact"},{"name":"negative regulation of fat cell apoptosis","type":"narrow"}],"termid":"GO:1904650"}


id: PBO:0004118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1 alpha related protein (predicted)","termid":"PBO:0004118"}


id: MONDO:0011968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2D (LGMD2D) is a subtype of autosomal recessive limb-girdle muscular dystrophy characterized by childhood onset of progressive proximal weakness of the shoulder and pelvic girdle muscles, resulting in difficulty walking, scapular winging, calf hypertrophy and contractures of the Achilles tendon, which lead to a tiptoe gait pattern. Cardiac and respiratory involvement is rare.","definition_xrefs":["Orphanet:62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of alpha-sarcoglycan","termid":"MONDO:0016141"},{"relation_name":"is_a","term_name":"familial dilated cardiomyopathy","termid":"MONDO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0006025","MONDO:0005336"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2D","secondary_identifiers":["OMIM:608099","UMLS:C2936332","DOID:0110278","GARD:438","MEDGEN:424706","NCIT:C142081","SCTID:715340002"],"synonyms":[{"name":"Adhalinopathy, primary","type":"related"},{"name":"Alpha-sarcoglycanopathy","type":"exact"},{"name":"DMDA2","type":"exact"},{"name":"Duchenne-like autosomal recessive muscular dystrophy type 2","type":"exact"},{"name":"Duchenne-like autosomal recessive muscular dystrophy, type 2","type":"related"},{"name":"LGMD2D","type":"exact"},{"name":"SGCA autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in SGCA","type":"exact"},{"name":"limb-girdle muscular dystrophy due to alpha-sarcoglycan deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2D","type":"exact"},{"name":"limb-girdle muscular dystrophy, type 2D","type":"related"},{"name":"muscular dystrophy limb-girdle with alpha-sarcoglycan","type":"related"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 3","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2D","type":"exact"},{"name":"primary adhalinopathy","type":"exact"}],"termid":"MONDO:0011968","xrefs":{"Monarch":{"xref_id":"0011968"}}}


id: MONDO:0003725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic disorder characterized by epithelial and/or myoepithelial tissue growth in the breast lobules. It may be associated with apocrine changes or sclerosis.","definition_xrefs":["NCIT:C3484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast adenosis","secondary_identifiers":["UMLS:C0085750","MESH:D005348","DOID:5998","MEDGEN:39336","EFO:0006891"],"synonyms":[{"name":"adenosis","type":"broad"},{"name":"adenosis - breast","type":"exact"},{"name":"adenosis of breast","type":"exact"},{"name":"adenosis of the breast","type":"exact"},{"name":"breast adenosis","type":"exact"},{"name":"microglandular adenosis","type":"related"}],"termid":"MONDO:0003725","xrefs":{"Monarch":{"xref_id":"0003725"}}}


id: GO:0016645
data:
  {"annotated_genes":["SJAG_00120","SJAG_01198","SJAG_01061","SJAG_00106","SJAG_01466","SJAG_03712","SJAG_01668","SJAG_01903","SJAG_02388","SJAG_04156","SJAG_01126"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004146"},{"annotations":[88030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036382"},{"annotations":[70810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004487"},{"annotations":[76916,76086,57745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004488"},{"annotations":[98737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106312"},{"annotations":[98738,96974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106313"},{"annotations":[70647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004657"},{"annotations":[78247],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004735"},{"annotations":[57437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004754"},{"annotations":[110068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004755"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00120":null,"SJAG_01061":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01466":null,"SJAG_01668":null,"SJAG_01903":null,"SJAG_02388":null,"SJAG_03712":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH group of donors","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:1.5.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH group of donors, other acceptors","type":"narrow"}],"termid":"GO:0016645","terms_by_termid":{"GO:0004146":null,"GO:0004487":null,"GO:0004488":null,"GO:0004657":null,"GO:0004735":null,"GO:0004754":null,"GO:0004755":null,"GO:0036382":null,"GO:0106312":null,"GO:0106313":null}}


id: GO:0046633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of an alpha-beta T cell population by cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell proliferation","termid":"GO:0042098"},{"relation_name":"is_a","term_name":"alpha-beta T cell activation","termid":"GO:0046631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell proliferation","synonyms":[{"name":"alpha-beta T lymphocyte proliferation","type":"exact"},{"name":"alpha-beta T-cell proliferation","type":"exact"},{"name":"alpha-beta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046633"}


id: GO:0051623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of norepinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of norepinephrine uptake","termid":"GO:0051621"},{"relation_name":"positively_regulates","term_name":"norepinephrine uptake","termid":"GO:0051620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of norepinephrine uptake","synonyms":[{"name":"activation of norepinephrine uptake","type":"narrow"},{"name":"positive regulation of levarterenol uptake","type":"exact"},{"name":"positive regulation of noradrenaline uptake","type":"exact"},{"name":"positive regulation of norepinephrine import","type":"exact"},{"name":"stimulation of norepinephrine uptake","type":"narrow"},{"name":"up regulation of norepinephrine uptake","type":"exact"},{"name":"up-regulation of norepinephrine uptake","type":"exact"},{"name":"upregulation of norepinephrine uptake","type":"exact"}],"termid":"GO:0051623"}


id: PBO:0073710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI family transcriptional corepressor 1","termid":"PBO:0073710"}


id: PBO:0062277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily H member 8 (gene/pseudogene)","termid":"PBO:0062277"}


id: PBO:0045096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLX6 antisense RNA 1","termid":"PBO:0045096"}


id: MONDO:0007824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incisors, lower central, absence of","secondary_identifiers":["OMIM:147330","UMLS:C1840225","MEDGEN:333512"],"synonyms":[{"name":"incisors, lower central, absence of","type":"exact"}],"termid":"MONDO:0007824","xrefs":{"Monarch":{"xref_id":"0007824"}}}


id: PBO:0109610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycolysis associated regulator of LDHA post-transcriptional modification 1","termid":"PBO:0109610"}


id: PBO:0072966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1B member 1, pseudogene","termid":"PBO:0072966"}


id: GO:0047274
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + 1-alpha-D-galactosyl-myo-inositol = raffinose + myo-inositol.","definition_xrefs":["EC:2.4.1.82","MetaCyc:2.4.1.82-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"galactinol-sucrose galactosyltransferase activity","secondary_identifiers":["RHEA:20161"],"synonyms":[{"name":"1-alpha-D-galactosyl-myo-inositol:sucrose 6-alpha-D-galactosyltransferase activity","type":"related"},{"name":"alpha-D-galactosyl-(1->3)-myo-inositol:sucrose 6-alpha-D-galactosyltransferase activity","type":"related"},{"name":"galactinol:sucrose 6-galactosyl transferase activity","type":"exact"},{"name":"galactosyltransferase, galactinol-sucrose","type":"exact"},{"name":"raffinose synthase activity","type":"exact"}],"termid":"GO:0047274"}


id: MONDO:0004702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The presence of whitish patches on the mucosal surface of the cervix. Histologic examination reveals hyperkeratosis. In a minority of cases, underlying dysplasia or carcinoma in situ is present.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"},{"relation_name":"is_a","term_name":"leukoplakia","termid":"MONDO:0043243"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine cervix leukoplakia","secondary_identifiers":["UMLS:C0269194","DOID:9043","ICD10CM:N88.0","ICD9:622.2","MEDGEN:124350","NCIT:C3976","SCTID:50923006"],"synonyms":[{"name":"cervical leukoplakia","type":"exact"},{"name":"cervix leukoplakia","type":"exact"},{"name":"cervix uteri leukoplakia","type":"exact"},{"name":"leukoplakia of cervix","type":"exact"},{"name":"leukoplakia of cervix (uteri)","type":"exact"},{"name":"leukoplakia of cervix uteri","type":"exact"},{"name":"leukoplakia of the cervix","type":"exact"},{"name":"leukoplakia of the cervix uteri","type":"exact"},{"name":"leukoplakia of the uterine cervix","type":"exact"},{"name":"leukoplakia of uterine cervix","type":"exact"}],"termid":"MONDO:0004702","xrefs":{"Monarch":{"xref_id":"0004702"}}}


id: PBO:0075128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein U11/U12 subunit 25","termid":"PBO:0075128"}


id: GO:0030665
data:
  {"annotated_genes":["SJAG_00379","SJAG_04609","SJAG_04644","SJAG_00800","SJAG_02177","SJAG_02453","SJAG_00108","SJAG_01167","SJAG_04517","SJAG_00104","SJAG_04565","SJAG_01809","SJAG_02805","SJAG_02282"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89228,94514],"is_not":false,"summary":null,"term":"GO:0030665"},{"annotations":[62264,78104,113167,113378],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[58348,108699,78441,74706],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[58832,65694],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[74075,80097],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-coated vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coated vesicle membrane","termid":"GO:0030662"},{"relation_name":"part_of","term_name":"clathrin-coated vesicle","termid":"GO:0030136"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00108":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_02453":null,"SJAG_02805":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04644":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"clathrin-coated vesicle membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"clathrin coated vesicle membrane","type":"narrow"}],"termid":"GO:0030665","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030130":null,"GO:0030665":null}}


id: PBO:0087458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a heterodimeric guanine nucleotide exchange factor (GEF); subunit of the Mon1-Ccz1 GEF complex, which stimulates nucleotide exchange and activation of Ypt7p, a Rab family GTPase involved in membrane tethering and fusion events at the late endosome and vacuole; GEF activity is stimulated by membrane association and anionic phospholipids; involved in localizing Ypt7p to the vacuolar membrane; required for macroautophagy, the CVT pathway and mitophagy","termid":"PBO:0087458"}


id: GO:0052190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host phagocytosis (obsolete GO:0052190)","termid":"GO:0052190"}


id: GO:1902347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a strigolactone stimulus.","definition_xrefs":["PMID:23893171","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to strigolactone","synonyms":[{"name":"response to strigolactone analog GR24","type":"related"}],"termid":"GO:1902347"}


id: PBO:0056300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1 light chain 3 gamma","termid":"PBO:0056300"}


id: GO:2000564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of CD8-positive, alpha-beta T cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell proliferation","termid":"GO:0046640"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001185"},{"relation_name":"regulates","term_name":"CD8-positive, alpha-beta T cell proliferation","termid":"GO:0035740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of CD8-positive, alpha-beta T cell proliferation","termid":"GO:2000564"}


id: GO:0016841
data:
  {"annotated_genes":["SJAG_04827","SJAG_00830"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008721"},{"annotations":[77834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004794"}]},"cv_name":"molecular_function","definition":"Catalysis of the release of ammonia by the cleavage of a carbon-nitrogen bond or the reverse reaction with ammonia as a substrate.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen lyase activity","termid":"GO:0016840"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00830":null,"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"ammonia-lyase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:4.3.1.-"],"termid":"GO:0016841","terms_by_termid":{"GO:0004794":null,"GO:0008721":null}}


id: PBO:0067183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 241, pseudogene","termid":"PBO:0067183"}


id: FYPO:0003773
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more transposon-encoded proteins measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal level of transposon-encoded protein in cell","synonyms":[{"name":"normal level of transposon-encoded protein during vegetative growth","type":"exact"},{"name":"normal level of transposon-encoded protein in cell during mitotic cell cycle","type":"related"},{"name":"normal transposon-encoded protein accumulation","type":"related"},{"name":"normal transposon-encoded protein level","type":"exact"}],"termid":"FYPO:0003773"}


id: SO:0000990
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Small non-coding RNA (55-65 nt long) containing highly conserved 5' and 3' ends (16 and 8 nt, respectively) that are predicted to come together to form a stem structure. Identified in the social amoeba Dictyostelium discoideum and localized in the cytoplasm.","definition_xrefs":["PMID:15333696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class_I_RNA","synonyms":[{"name":"class I RNA","type":"exact"}],"termid":"SO:0000990"}


id: GO:0034145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 4 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 4 signaling pathway","termid":"GO:0034143"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 4 signaling pathway","termid":"GO:0034142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 4 signaling pathway","synonyms":[{"name":"positive regulation of TLR4 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 4 signalling pathway","type":"exact"}],"termid":"GO:0034145"}


id: PBO:0076516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 18 pseudogene","termid":"PBO:0076516"}


id: PBO:0065354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 4","termid":"PBO:0065354"}


id: GO:0046504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerol ether metabolic process","termid":"GO:0006662"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glycerol ether biosynthetic process","synonyms":[{"name":"glycerol ether anabolism","type":"exact"},{"name":"glycerol ether biosynthesis","type":"exact"},{"name":"glycerol ether formation","type":"exact"},{"name":"glycerol ether synthesis","type":"exact"}],"termid":"GO:0046504"}


id: GO:0045060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of elimination of immature T cells in the thymus which react strongly with self-antigens.","definition_xrefs":["ISBN:0781735149","PMID:12414722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative T cell selection","termid":"GO:0043383"},{"relation_name":"is_a","term_name":"thymic T cell selection","termid":"GO:0045061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative thymic T cell selection","synonyms":[{"name":"negative thymic T lymphocyte selection","type":"exact"},{"name":"negative thymic T-cell selection","type":"exact"},{"name":"negative thymic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045060"}


id: MONDO:0013280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A liposarcoma characterized by the presence of round non-lipogenic primitive mesenchymal cells and small signet ring lipoblasts within a myxoid stoma with a branching vascular pattern. This category includes hypercellular lesions with round cell morphology, formerly known as round cell liposarcoma.","definition_xrefs":["NCIT:C27781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myxoid/round cell liposarcoma","termid":"MONDO:0020561"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"myxoid liposarcoma","secondary_identifiers":["OMIM:613488","UMLS:C0206634","DOID:5363","EFO:0000613","ICDO:8852/3","GARD:15667","MEDGEN:104903","MESH:D018208","ICD9:171.9","SCTID:404069006","DOID:5709"],"synonyms":[{"name":"Myxoliposarcoma","type":"related"},{"name":"mixed-type liposarcoma","type":"related"},{"name":"myxoid liposarcoma","type":"exact"},{"name":"myxoid liposarcoma (morphologic abnormality)","type":"exact"},{"name":"myxoid/round cell liposarcoma","type":"broad"}],"termid":"MONDO:0013280","xrefs":{"Monarch":{"xref_id":"0013280"}}}


id: PBO:0072479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 8","termid":"PBO:0072479"}


id: GO:0150043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the extracellular matrix of the perisynaptic space (the extracellular space adjacent to the synapse) and the synaptic cleft.","definition_xrefs":["PMID:17189701","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of synapse-associated extracellular matrix","synonyms":[{"name":"extra-synaptic extracellular matrix structural constituent","type":"exact"},{"name":"structural constituent of extra-synaptic extracellular matrix","type":"exact"},{"name":"synapse-associated extracellular matrix structural constituent","type":"exact"}],"termid":"GO:0150043"}


id: MONDO:0003634
data:
  {"annotated_genes":["SJAG_04881","SJAG_00846"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[86294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"}]},"cv_name":"mondo","definition":"The presence of abnormal amounts of protein in the urine.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00846":null,"SJAG_04881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"proteinuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:10976","MESH:D011507","UMLS:C0033687","DOID:576","ICD9:791.0","icd11.foundation:930895737","ICD10CM:R80"],"termid":"MONDO:0003634","terms_by_termid":{"MONDO:0010438":null,"MONDO:0014166":null},"xrefs":{"Monarch":{"xref_id":"0003634"}}}


id: PBO:0080648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat, sterile alpha motif and U-box domain containing 1","termid":"PBO:0080648"}


id: PBO:0071541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 6","termid":"PBO:0071541"}


id: PBO:0083244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; extensively overlaps essential SMD1 gene encoding a U6 snRNP protein","termid":"PBO:0083244"}


id: PBO:0078399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 9-1","termid":"PBO:0078399"}


id: PBO:0054994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2409","termid":"PBO:0054994"}


id: SO:0001153
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A type VIa beta turn with the following phi and psi sngles on amino acid residues 2 and 3: phi-2 = -120 degrees, psi-2 = 120 degrees, phi-3 = -60 degrees, psi-3 = 0 degrees.","definition_xrefs":["PMID:27428516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn_type_six_a","termid":"SO:0001151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_type_six_a_two","synonyms":[{"name":"beta turn type six a two","type":"exact"},{"name":"type VIa2 beta turn","type":"exact"},{"name":"type VIa2 turn","type":"exact"}],"termid":"SO:0001153"}


id: PBO:0051318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR9-2 (pseudogene)","termid":"PBO:0051318"}


id: PBO:0079096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 9-1","termid":"PBO:0079096"}


id: SO:0000166
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An enhancer bound by a factor.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"bound_by_factor","termid":"SO:0000277"},{"relation_name":"is_a","term_name":"enhancer","termid":"SO:0000165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer_bound_by_factor","synonyms":[{"name":"enhancer bound by factor","type":"exact"}],"termid":"SO:0000166"}


id: PBO:0062885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OVCH1 antisense RNA 1","termid":"PBO:0062885"}


id: GO:0019578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aldaric acid, any dicarboxylic acid formed by oxidation of by the terminal groups of an aldose to carboxyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldaric acid metabolic process","termid":"GO:0019577"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"aldaric acid biosynthetic process","synonyms":[{"name":"aldaric acid anabolism","type":"exact"},{"name":"aldaric acid biosynthesis","type":"exact"},{"name":"aldaric acid formation","type":"exact"},{"name":"aldaric acid synthesis","type":"exact"}],"termid":"GO:0019578"}


id: PBO:0069674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 951, pseudogene","termid":"PBO:0069674"}


id: MONDO:0013846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripartum cardiomyopathy, susceptibility to","secondary_identifiers":["OMIM:614670","UMLS:C3553406","MEDGEN:766320"],"synonyms":[{"name":"Ppcm, susceptibility to","type":"related"},{"name":"peripartum cardiomyopathy, susceptibility to","type":"exact"}],"termid":"MONDO:0013846","xrefs":{"Monarch":{"xref_id":"0013846"}}}


id: GO:1990187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a protein is transported to, or maintained at mRNA.","definition_xrefs":["PMID:22890846","GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete protein localization to mRNA (obsolete GO:1990187)","synonyms":[{"name":"protein localization to mRNA","type":"exact"}],"termid":"GO:1990187"}


id: GO:0090504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of one cell sheet over other cells or yolk.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial sheet","termid":"GO:0002011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epiboly","termid":"GO:0090504"}


id: MONDO:0859478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, X-linked, 6","secondary_identifiers":["OMIM:301101","DOID:0070597","UMLS:C5829562","MEDGEN:1840198"],"termid":"MONDO:0859478","xrefs":{"Monarch":{"xref_id":"0859478"}}}


id: PBO:0000666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase kinase 3 (GSK-3) subfamily","termid":"PBO:0000666"}


id: PBO:0108968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 1","termid":"PBO:0108968"}


id: GO:0034845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: naphthyl-2-methyl-succinyl-CoA = naphthyl-2-methylene-succinyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r1258"],"gene_count":0,"genotype_count":0,"name":"obsolete naphthyl-2-methyl-succinyl-CoA dehydrogenase activity (obsolete GO:0034845)","termid":"GO:0034845"}


id: PBO:0028907
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_cellular_response_to_calcium_ion","termid":"PBO:0028907"}


id: PBO:0111297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogrid_version","termid":"PBO:0111297"}


id: PBO:0029731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_1,3-beta-D-glucan_synthase_activity","termid":"PBO:0029731"}


id: GO:0060805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency or extent of transcription from an RNA polymerase II promoter ultimately resulting in a decrease in trophoblast stem cells differentiating into the more mature cells of the trophoblast.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of trophoblast cell differentiation by transcription regulation from RNA polymerase II promoter (obsolete GO:0060805)","termid":"GO:0060805"}


id: SO:0000060
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One arm of a compound chromosome.","direct_ancestors":[{"relation_name":"is_a","term_name":"compound_chromosome","termid":"SO:1000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compound_chromosome_arm","synonyms":[{"name":"compound chromosome arm","type":"exact"}],"termid":"SO:0000060"}


id: PBO:0026745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_glucose_starvation","termid":"PBO:0026745"}


id: PBO:0040700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 like 1","termid":"PBO:0040700"}


id: PBO:0089634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress-responsive DNA-binding transcription factor Prr1","termid":"PBO:0089634"}


id: GO:0006878
data:
  {"annotated_genes":["SJAG_00802","SJAG_04403","SJAG_02399","SJAG_01694","SJAG_00668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75264,78401,93465,100496,108215],"is_not":false,"summary":null,"term":"GO:0006878"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of copper ions within a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"copper ion homeostasis","termid":"GO:0055070"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_00802":null,"SJAG_01694":null,"SJAG_02399":null,"SJAG_04403":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular copper ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cellular copper ion homeostasis","type":"exact"},{"name":"copper homeostasis","type":"broad"}],"termid":"GO:0006878","terms_by_termid":{"GO:0006878":null}}


id: PR:O13927
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tht2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twin horsetail protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.07","synonyms":[{"name":"Spom972h-tht2","type":"exact"},{"name":"meiotically up-regulated gene 22 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13927"}


id: PBO:0030736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_mitotic_G2_phase_during_nitrogen_starvation","termid":"PBO:0030736"}


id: GO:0018542
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-dihydroxy DDT + O2 = 6-oxo-2-hydroxy-7-(4-chlorophenyl)-3,8,8,8-tetrachloroocta-2E,4E-dienoate.","definition_xrefs":["UM-BBD_reactionID:r0452"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,3-dihydroxy DDT 1,2-dioxygenase activity (obsolete GO:0018542)","termid":"GO:0018542"}


id: MONDO:0001781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign mesothelial tumor of the serosal surface of the uterine body and myometrium. It is characterized by the presence of gland-like structures.","definition_xrefs":["NCIT:C27250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign mesothelioma","termid":"MONDO:0002373"},{"relation_name":"is_a","term_name":"adenomatoid tumor","termid":"MONDO:0004230"},{"relation_name":"is_a","term_name":"benign neoplasm of corpus uteri","termid":"MONDO:0021525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus adenomatoid tumor","secondary_identifiers":["UMLS:C1336902","DOID:1371","MEDGEN:234464"],"synonyms":[{"name":"body of uterus adenomatoid tumor","type":"exact"},{"name":"body of uterus adenomatoid tumour","type":"exact"},{"name":"uterine corpus adenomatoid tumor","type":"exact"},{"name":"uterine corpus localised epithelial mesothelioma","type":"exact"},{"name":"uterine corpus localized epithelial mesothelioma","type":"exact"}],"termid":"MONDO:0001781","xrefs":{"Monarch":{"xref_id":"0001781"}}}


id: GO:0052205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the function of proteins in a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of molecular function in other organism involved in symbiotic interaction (obsolete GO:0052205)","synonyms":[{"name":"modification of molecular function in other organism during symbiotic interaction","type":"exact"},{"name":"modification of protein function in other organism during symbiotic interaction","type":"exact"},{"name":"modulation of molecular function in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052205"}


id: PBO:0076362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SZT2 subunit of KICSTOR complex","termid":"PBO:0076362"}


id: SO:0000641
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a repeating tetranucleotide sequence (four bases).","direct_ancestors":[{"relation_name":"is_a","term_name":"microsatellite","termid":"SO:0000289"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetranucleotide_repeat_microsatellite_feature","synonyms":[{"name":"tetranucleotide repeat microsatellite feature","type":"exact"}],"termid":"SO:0000641"}


id: MONDO:0016087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive non-infectious anterior vertebral fusion (PAVF) is an early childhood spinal disorder characterized by the gradual onset of thoracic and/or lumbar spine ankylosis often in conjunction with kyphosis with distinctive radiological features.","definition_xrefs":["Orphanet:2062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"progressive non-infectious anterior vertebral fusion","secondary_identifiers":["GARD:18759","UMLS:C4304839","MEDGEN:930508","SCTID:719268008"],"synonyms":[{"name":"Copenhagen syndrome","type":"exact"}],"termid":"MONDO:0016087","xrefs":{"Monarch":{"xref_id":"0016087"}}}


id: GO:0050205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carbamoyl phosphate + oxamate = oxalurate + phosphate.","definition_xrefs":["RHEA:22984","EC:2.1.3.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxyl- or carbamoyltransferase activity","termid":"GO:0016743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"oxamate carbamoyltransferase activity","secondary_identifiers":["MetaCyc:OXAMATE-CARBAMOYLTRANSFERASE-RXN","KEGG_REACTION:R02937"],"synonyms":[{"name":"carbamoyl-phosphate:oxamate carbamoyltransferase activity","type":"related"},{"name":"oxamic transcarbamylase activity","type":"related"}],"termid":"GO:0050205"}


id: GO:0015040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An electron transfer flavoprotein that functions as a housekeeping protein that links acyl-CoA dehydrogenase reactions with the respiratory chain, such as in the fatty acid degradation pathway.","definition_xrefs":["PMID:8599534"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transfer flavoprotein, group I (obsolete GO:0015040)","synonyms":[{"name":"electron transfer flavoprotein, group I","type":"exact"}],"termid":"GO:0015040"}


id: PBO:0087661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is a subcomplex of the SEA complex, a coatomer-related complex that associates dynamically with the vacuole; Npr2p may have a structural or regulatory role, supporting Iml1p function as a GAP for the Rag family GTPase Gtr1p, and resulting in inhibition of TORC1 signaling in response to amino acid deprivation; SEACIT is required for non-nitrogen-starvation-induced autophagy; homolog of human tumor suppressor NPRL2","termid":"PBO:0087661"}


id: GO:0097704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to oscillatory fluid shear stress that occurs at the level of a cell.","definition_xrefs":["GOC:bc","GOC:BHF","GOC:BHF_miRNA","PMID:21768538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fluid shear stress","termid":"GO:0071498"},{"relation_name":"is_a","term_name":"response to oscillatory fluid shear stress","termid":"GO:0097702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oscillatory fluid shear stress","termid":"GO:0097704"}


id: PBO:0069120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 369, pseudogene","termid":"PBO:0069120"}


id: PBO:0000899
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds STREP motif","termid":"PBO:0000899"}


id: GO:0055063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of sulfate ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"sulfate ion homeostasis","secondary_identifiers":["GO:0080174"],"synonyms":[{"name":"sulfate homeostasis","type":"exact"},{"name":"sulphate ion homeostasis","type":"exact"}],"termid":"GO:0055063"}


id: GO:0035641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific movement from place to place of an organism in response to a novel environment.","definition_xrefs":["PMID:17151232","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"},{"relation_name":"is_a","term_name":"exploration behavior","termid":"GO:0035640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotory exploration behavior","termid":"GO:0035641"}


id: GO:0062061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a TAP complex.","definition_xrefs":["PMID:17947644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"TAP complex binding","termid":"GO:0062061"}


id: PBO:0002229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase activator (predicted)","termid":"PBO:0002229"}


id: GO:0052560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates the immune response of the symbiont organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of symbiont immune response (obsolete GO:0052560)","synonyms":[{"name":"induction by organism of symbiont immune response","type":"exact"}],"termid":"GO:0052560"}


id: PBO:0054205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1585","termid":"PBO:0054205"}


id: MONDO:0002307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of both the eyelids and the conjunctiva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctivitis","termid":"MONDO:0003799"},{"relation_name":"is_a","term_name":"blepharitis","termid":"MONDO:0004785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blepharoconjunctivitis","secondary_identifiers":["SCTID:68659002","ICD10CM:H10.5","icd11.foundation:956823887","DOID:2456","ICD9:372.2","MEDGEN:2669","NCIT:C34430","UMLS:C0005743","ICD9:372.20"],"termid":"MONDO:0002307","xrefs":{"Monarch":{"xref_id":"0002307"}}}


id: GO:0015702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of chlorate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"chlorate transport","termid":"GO:0015702"}


id: PR:Q09919
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fip1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane iron permease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.07c","synonyms":[{"name":"Spom972h-fip1","type":"exact"}],"termid":"PR:Q09919"}


id: MONDO:0030975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 20","secondary_identifiers":["MEDGEN:1808256","OMIM:619938","UMLS:C5677011"],"synonyms":[{"name":"POF20","type":"exact"},{"name":"premature ovarian failure 20","type":"exact"}],"termid":"MONDO:0030975","xrefs":{"Monarch":{"xref_id":"0030975"}}}


id: PBO:0073249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 2 pseudogene 1","termid":"PBO:0073249"}


id: PBO:0048816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 5","termid":"PBO:0048816"}


id: PBO:0089535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORVET complex WD repeat subunit Vps3","termid":"PBO:0089535"}


id: PBO:0065179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl-tRNA synthetase associated domain containing 1, pseudogene","termid":"PBO:0065179"}


id: GO:0097705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to pulsatile fluid shear stress that occurs in a vascular endothelial cell.","definition_xrefs":["GOC:BHF","PMID:21768538","GOC:bc","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular endothelial cell response to fluid shear stress","termid":"GO:0097699"},{"relation_name":"is_a","term_name":"cellular response to pulsatile fluid shear stress","termid":"GO:0097703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to pulsatile fluid shear stress","synonyms":[{"name":"blood vessel endothelial cell response to pulsatile fluid shear stress","type":"exact"}],"termid":"GO:0097705"}


id: PR:Q9P378
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gas1 gene.","definition_xrefs":["UniProtKB:Q9P378","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase gas1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.02c","synonyms":[{"name":"Spom972h-gas1","type":"exact"}],"termid":"PR:Q9P378"}


id: PR:C6Y4C9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.12","synonyms":[{"name":"Spom972h-spo13","type":"exact"}],"termid":"PR:C6Y4C9"}


id: PBO:0027397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_N2-guanine_methylation","termid":"PBO:0027397"}


id: PBO:0005352
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.4.-","termid":"PBO:0005352"}


id: PBO:0047808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXL2 neighbor","termid":"PBO:0047808"}


id: PBO:0087192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase subunit AC40; common to RNA polymerase I and III; predominant determinant targeting Ty1 integration upstream of Pol III-transcribed genes","termid":"PBO:0087192"}


id: PBO:0049280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-disulfide reductase","termid":"PBO:0049280"}


id: PBO:0004986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epimarase (predicted)","termid":"PBO:0004986"}


id: PBO:0005567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-conjugating enzyme Ubc12","termid":"PBO:0005567"}


id: PBO:0088486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Cxr1","termid":"PBO:0088486"}


id: PBO:0075739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 54","termid":"PBO:0075739"}


id: PBO:0028133
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-poly(A)+_RNA-containing_focus_present_in_nucleus","termid":"PBO:0028133"}


id: PBO:0082133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actin cortical patch component; interacts with the actin depolymerizing factor cofilin; inhibits elongation of aged ADP-actin filaments decorated with cofilin to maintain a high level of assembly-competent actin species; required to restrict cofilin localization to cortical patches; putative regulator of cytokinesis; contains WD repeats; mutations in human homolog WDR1 are associated with cardiac hypertrophy","termid":"PBO:0082133"}


id: PBO:0045147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 5","termid":"PBO:0045147"}


id: GO:0004927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete sevenless receptor activity (obsolete GO:0004927)","synonyms":[{"name":"sevenless receptor activity","type":"exact"}],"termid":"GO:0004927"}


id: PBO:0113065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; required for diauxic shift-induced histone H2B deposition onto rDNA genes; transcriptional modulator involved in regulation of structural phospholipid biosynthesis genes and metabolically unrelated genes, as well as maintenance of telomeres, mating efficiency, and sporulation; localizes to both the nucleus and mitochondria where it may play a role in mitophagy","termid":"PBO:0113065"}


id: GO:0061006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell proliferation that contributes to the shaping of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"part_of","term_name":"kidney morphogenesis","termid":"GO:0060993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in kidney morphogenesis","termid":"GO:0061006"}


id: PBO:0091043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane phospholipid translocase (flippase) Neo1","termid":"PBO:0091043"}


id: PBO:0053665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 842","termid":"PBO:0053665"}


id: PBO:0041581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 open reading frame 23","termid":"PBO:0041581"}


id: GO:1900264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA-directed DNA polymerase activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"positive regulation of DNA biosynthetic process","termid":"GO:2000573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"activation of DNA duplicase activity","type":"exact"},{"name":"activation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"activation of DNA polymerase I","type":"narrow"},{"name":"activation of DNA polymerase II","type":"narrow"},{"name":"activation of DNA polymerase III","type":"narrow"},{"name":"activation of DNA polymerase V activity","type":"narrow"},{"name":"activation of DNA polymerase alpha","type":"narrow"},{"name":"activation of DNA polymerase beta","type":"narrow"},{"name":"activation of DNA polymerase gamma","type":"narrow"},{"name":"activation of DNA replicase activity","type":"exact"},{"name":"activation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"activation of DNA-directed DNA polymerase activity","type":"narrow"},{"name":"activation of Klenow fragment","type":"narrow"},{"name":"activation of Taq DNA polymerase","type":"narrow"},{"name":"activation of Taq Pol I","type":"narrow"},{"name":"activation of Tca DNA polymerase","type":"narrow"},{"name":"activation of alpha DNA polymerase activity","type":"narrow"},{"name":"activation of beta DNA polymerase activity","type":"narrow"},{"name":"activation of delta DNA polymerase activity","type":"narrow"},{"name":"activation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"activation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"activation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"activation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"activation of duplicase","type":"broad"},{"name":"activation of epsilon DNA polymerase activity","type":"narrow"},{"name":"activation of eta DNA polymerase activity","type":"narrow"},{"name":"activation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"activation of iota DNA polymerase activity","type":"narrow"},{"name":"activation of kappa DNA polymerase activity","type":"narrow"},{"name":"activation of lambda DNA polymerase activity","type":"narrow"},{"name":"activation of mu DNA polymerase activity","type":"narrow"},{"name":"activation of nu DNA polymerase activity","type":"narrow"},{"name":"activation of sequenase","type":"related"},{"name":"activation of sigma DNA polymerase activity","type":"narrow"},{"name":"activation of theta DNA polymerase activity","type":"narrow"},{"name":"activation of zeta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of DNA duplicase activity","type":"exact"},{"name":"positive regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"positive regulation of DNA polymerase I","type":"narrow"},{"name":"positive regulation of DNA polymerase II","type":"narrow"},{"name":"positive regulation of DNA polymerase III","type":"narrow"},{"name":"positive regulation of DNA polymerase V activity","type":"narrow"},{"name":"positive regulation of DNA polymerase alpha","type":"narrow"},{"name":"positive regulation of DNA polymerase beta","type":"narrow"},{"name":"positive regulation of DNA polymerase gamma","type":"narrow"},{"name":"positive regulation of DNA replicase activity","type":"exact"},{"name":"positive regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"positive regulation of Klenow fragment","type":"narrow"},{"name":"positive regulation of Taq DNA polymerase","type":"narrow"},{"name":"positive regulation of Taq Pol I","type":"narrow"},{"name":"positive regulation of Tca DNA polymerase","type":"narrow"},{"name":"positive regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"positive regulation of beta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of delta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"positive regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"positive regulation of duplicase","type":"broad"},{"name":"positive regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"positive regulation of eta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"positive regulation of iota DNA polymerase activity","type":"narrow"},{"name":"positive regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"positive regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"positive regulation of mu DNA polymerase activity","type":"narrow"},{"name":"positive regulation of nu DNA polymerase activity","type":"narrow"},{"name":"positive regulation of sequenase","type":"related"},{"name":"positive regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"positive regulation of theta DNA polymerase activity","type":"narrow"},{"name":"positive regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"up regulation of DNA duplicase activity","type":"exact"},{"name":"up regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up regulation of DNA polymerase I","type":"narrow"},{"name":"up regulation of DNA polymerase II","type":"narrow"},{"name":"up regulation of DNA polymerase III","type":"narrow"},{"name":"up regulation of DNA polymerase V activity","type":"narrow"},{"name":"up regulation of DNA polymerase alpha","type":"narrow"},{"name":"up regulation of DNA polymerase beta","type":"narrow"},{"name":"up regulation of DNA polymerase gamma","type":"narrow"},{"name":"up regulation of DNA replicase activity","type":"exact"},{"name":"up regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"up regulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"up regulation of Klenow fragment","type":"narrow"},{"name":"up regulation of Taq DNA polymerase","type":"narrow"},{"name":"up regulation of Taq Pol I","type":"narrow"},{"name":"up regulation of Tca DNA polymerase","type":"narrow"},{"name":"up regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"up regulation of beta DNA polymerase activity","type":"narrow"},{"name":"up regulation of delta DNA polymerase activity","type":"narrow"},{"name":"up regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"up regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"up regulation of duplicase","type":"broad"},{"name":"up regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"up regulation of eta DNA polymerase activity","type":"narrow"},{"name":"up regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"up regulation of iota DNA polymerase activity","type":"narrow"},{"name":"up regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"up regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"up regulation of mu DNA polymerase activity","type":"narrow"},{"name":"up regulation of nu DNA polymerase activity","type":"narrow"},{"name":"up regulation of sequenase","type":"related"},{"name":"up regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"up regulation of theta DNA polymerase activity","type":"narrow"},{"name":"up regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of DNA duplicase activity","type":"exact"},{"name":"up-regulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up-regulation of DNA polymerase I","type":"narrow"},{"name":"up-regulation of DNA polymerase II","type":"narrow"},{"name":"up-regulation of DNA polymerase III","type":"narrow"},{"name":"up-regulation of DNA polymerase V activity","type":"narrow"},{"name":"up-regulation of DNA polymerase alpha","type":"narrow"},{"name":"up-regulation of DNA polymerase beta","type":"narrow"},{"name":"up-regulation of DNA polymerase gamma","type":"narrow"},{"name":"up-regulation of DNA replicase activity","type":"exact"},{"name":"up-regulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"up-regulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"up-regulation of Klenow fragment","type":"narrow"},{"name":"up-regulation of Taq DNA polymerase","type":"narrow"},{"name":"up-regulation of Taq Pol I","type":"narrow"},{"name":"up-regulation of Tca DNA polymerase","type":"narrow"},{"name":"up-regulation of alpha DNA polymerase activity","type":"narrow"},{"name":"up-regulation of beta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of delta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"up-regulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"up-regulation of duplicase","type":"broad"},{"name":"up-regulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"up-regulation of eta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"up-regulation of iota DNA polymerase activity","type":"narrow"},{"name":"up-regulation of kappa DNA polymerase activity","type":"narrow"},{"name":"up-regulation of lambda DNA polymerase activity","type":"narrow"},{"name":"up-regulation of mu DNA polymerase activity","type":"narrow"},{"name":"up-regulation of nu DNA polymerase activity","type":"narrow"},{"name":"up-regulation of sequenase","type":"related"},{"name":"up-regulation of sigma DNA polymerase activity","type":"narrow"},{"name":"up-regulation of theta DNA polymerase activity","type":"narrow"},{"name":"up-regulation of zeta DNA polymerase activity","type":"narrow"},{"name":"upregulation of DNA duplicase activity","type":"exact"},{"name":"upregulation of DNA nucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"upregulation of DNA polymerase I","type":"narrow"},{"name":"upregulation of DNA polymerase II","type":"narrow"},{"name":"upregulation of DNA polymerase III","type":"narrow"},{"name":"upregulation of DNA polymerase V activity","type":"narrow"},{"name":"upregulation of DNA polymerase alpha","type":"narrow"},{"name":"upregulation of DNA polymerase beta","type":"narrow"},{"name":"upregulation of DNA polymerase gamma","type":"narrow"},{"name":"upregulation of DNA replicase activity","type":"exact"},{"name":"upregulation of DNA-dependent DNA polymerase activity","type":"exact"},{"name":"upregulation of DNA-directed DNA polymerase activity","type":"exact"},{"name":"upregulation of Klenow fragment","type":"narrow"},{"name":"upregulation of Taq DNA polymerase","type":"narrow"},{"name":"upregulation of Taq Pol I","type":"narrow"},{"name":"upregulation of Tca DNA polymerase","type":"narrow"},{"name":"upregulation of alpha DNA polymerase activity","type":"narrow"},{"name":"upregulation of beta DNA polymerase activity","type":"narrow"},{"name":"upregulation of delta DNA polymerase activity","type":"narrow"},{"name":"upregulation of deoxynucleoside-triphosphate:DNA deoxynucleotidyltransferase (DNA-directed) activity","type":"exact"},{"name":"upregulation of deoxyribonucleic acid duplicase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic duplicase activity","type":"exact"},{"name":"upregulation of deoxyribonucleic polymerase I","type":"narrow"},{"name":"upregulation of duplicase","type":"broad"},{"name":"upregulation of epsilon DNA polymerase activity","type":"narrow"},{"name":"upregulation of eta DNA polymerase activity","type":"narrow"},{"name":"upregulation of gamma DNA-directed DNA polymerase activity","type":"narrow"},{"name":"upregulation of iota DNA polymerase activity","type":"narrow"},{"name":"upregulation of kappa DNA polymerase activity","type":"narrow"},{"name":"upregulation of lambda DNA polymerase activity","type":"narrow"},{"name":"upregulation of mu DNA polymerase activity","type":"narrow"},{"name":"upregulation of nu DNA polymerase activity","type":"narrow"},{"name":"upregulation of sequenase","type":"related"},{"name":"upregulation of sigma DNA polymerase activity","type":"narrow"},{"name":"upregulation of theta DNA polymerase activity","type":"narrow"},{"name":"upregulation of zeta DNA polymerase activity","type":"narrow"}],"termid":"GO:1900264"}


id: MONDO:0022610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchiectasis oligospermia","termid":"MONDO:0022610","xrefs":{"Monarch":{"xref_id":"0022610"}}}


id: PBO:0038773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTRT1 pseudogene 1","termid":"PBO:0038773"}


id: FYPO:0000098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to calcium. Cells stop growing (and may die) at a concentration of calcium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to calcium","synonyms":[{"name":"hypersensitive to calcium","type":"exact"},{"name":"sensitive to calcium chloride","type":"narrow"},{"name":"sensitive to calcium during mitotic cell cycle","type":"related"},{"name":"sensitive to calcium during vegetative growth","type":"exact"},{"name":"sensitive to calcium ions","type":"exact"}],"termid":"FYPO:0000098"}


id: PBO:0069392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 652, pseudogene","termid":"PBO:0069392"}


id: GO:0004653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. This reaction is the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis.","definition_xrefs":["ISBN:0879695595","EC:2.4.1.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.41-RXN","Reactome:R-HSA-5096532","Reactome:R-HSA-5096537","Reactome:R-HSA-913675","Reactome:R-HSA-8851619","Reactome:R-HSA-9694438","Reactome:R-HSA-9683760"],"synonyms":[{"name":"UDP-GalNAc:polypeptide N-acetylgalactosaminyl transferase activity","type":"related"},{"name":"UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:polypeptide N-acetylgalactosaminyl-transferase activity","type":"related"},{"name":"UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine-glycoprotein N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine-protein N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:kappa-casein polypeptide N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:polypeptide N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:protein N-acetylgalactosaminyl transferase activity","type":"related"},{"name":"UDP-acetylgalactosamine-glycoprotein acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-acetylgalactosamine:peptide-N-galactosaminyltransferase activity","type":"related"},{"name":"glycoprotein acetylgalactosaminyltransferase activity","type":"related"},{"name":"polypeptide-N-acetylgalactosamine transferase activity","type":"related"},{"name":"protein-UDP acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-glycoprotein acetylgalactosaminyltransferase activity","type":"related"}],"termid":"GO:0004653"}


id: PBO:0065835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9A, member RAS oncogene family","termid":"PBO:0065835"}


id: PBO:0064308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"procollagen-lysine,2-oxoglutarate 5-dioxygenase 3","termid":"PBO:0064308"}


id: MONDO:0700082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which (part or full) chromosome 21 is attached to another chromosome, resulting in the presence of a third copy of part of full chromosome 21 genetic material. A Robertsonian translocation is a structural chromosomal anomaly in which two acrocentric chromosomes break, resulting in the fusion of the nonhomologous chromosomes’ long arms to form a single, large chromosome.","definition_xrefs":["PMID:23097978","PMID:29956287","PMID:1831959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocation Down syndrome","termid":"MONDO:0700128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Robertsonian translocation Down syndrome","secondary_identifiers":["MEDGEN:1816520","NCIT:C188150","UMLS:C5707615"],"termid":"MONDO:0700082","xrefs":{"Monarch":{"xref_id":"0700082"}}}


id: PBO:0046827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5","termid":"PBO:0046827"}


id: PBO:0041537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17 open reading frame 75","termid":"PBO:0041537"}


id: GO:1903195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-dopa biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"L-dopa biosynthetic process","termid":"GO:1903185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"regulation of L-dopa biosynthetic process","synonyms":[{"name":"regulation of L-dopa anabolism","type":"exact"},{"name":"regulation of L-dopa biosynthesis","type":"exact"},{"name":"regulation of L-dopa formation","type":"exact"},{"name":"regulation of L-dopa synthesis","type":"exact"}],"termid":"GO:1903195"}


id: MONDO:0019203
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute interstitial pneumonia (AIP), also referred to as Hamman-Rich syndrome, is a rapidly progressive and histologically distinct form of idiopathic interstitial pneumonia.","definition_xrefs":["Orphanet:79126"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete idiopathic pulmonary fibrosis (obsolete MONDO:0008345)","termid":"MONDO:0008345"},{"relation_name":"is_a","term_name":"idiopathic interstitial pneumonia","termid":"MONDO:0002429"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute interstitial pneumonia","secondary_identifiers":["MEDGEN:39340","ICD9:516.33","DOID:2800","GARD:12835","NANDO:1200420","UMLS:C0085786","SCTID:236302005","MedDRA:10066728","icd11.foundation:2116884221","NCIT:C35806"],"synonyms":[{"name":"AIP","type":"exact"},{"name":"Hamman-rich disease","type":"exact"},{"name":"Hamman-rich syndrome","type":"exact"},{"name":"accelerated interstitial pneumonia","type":"exact"},{"name":"acute interstitial pneumonitis","type":"exact"},{"name":"idiopathic pulmonary fibrosis, acute fatal form","type":"exact"}],"termid":"MONDO:0019203","xrefs":{"Monarch":{"xref_id":"0019203"}}}


id: PBO:0091580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein, mature-T-Cell Proliferation I type ortholog, unknown biological role Cmc4","termid":"PBO:0091580"}


id: PBO:0090110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(Ser) Um(44) 2'-O-methyltransferasetRNA Trm44","termid":"PBO:0090110"}


id: GO:0045066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a regulatory T cell. Regulatory T cells control or suppress immune responses through a variety of mechanisms and subsets include the CD4+CD25+ cell type as well as certain CD8+ cell types.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulatory T cell differentiation","synonyms":[{"name":"regulatory T cell development","type":"related"},{"name":"regulatory T lymphocyte differentiation","type":"exact"},{"name":"regulatory T-cell differentiation","type":"exact"},{"name":"regulatory T-lymphocyte differentiation","type":"exact"},{"name":"suppressor T cell differentiation","type":"exact"},{"name":"suppressor T lymphocyte differentiation","type":"exact"},{"name":"suppressor T-cell differentiation","type":"exact"},{"name":"suppressor T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045066"}


id: PBO:0051005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin (CD79A) binding protein 1 pseudogene 3","termid":"PBO:0051005"}


id: GO:1905248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of memory.","definition_xrefs":["GOC:TermGenie","PMID:25905804","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of memory (obsolete GO:1905248)","synonyms":[{"name":"modulation of memory","type":"narrow"}],"termid":"GO:1905248"}


id: PBO:0042739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPN pseudogene 2","termid":"PBO:0042739"}


id: GO:0072013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the glomus over time from its initial formation until its mature state. The glomus forms from the splanchnic intermediate mesoderm and is the vascularized filtration unit, filtering the blood before it enters the tubules. The glomus is external to the nephron and extends over more than one body segment.","definition_xrefs":["PMID:9268568","PMID:15647339","PMID:10572058","XAO:0000318","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomus development","synonyms":[{"name":"pronephric glomus development","type":"exact"}],"termid":"GO:0072013"}


id: PBO:0040748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain cytoplasmic RNA 1, pseudogene 3","termid":"PBO:0040748"}


id: GO:0032706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-22 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-22 production","termid":"GO:0032666"},{"relation_name":"negatively_regulates","term_name":"interleukin-22 production","termid":"GO:0032626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-22 production","secondary_identifiers":["GO:0045394"],"synonyms":[{"name":"down regulation of interleukin-22 production","type":"exact"},{"name":"down-regulation of interleukin-22 production","type":"exact"},{"name":"downregulation of interleukin-22 production","type":"exact"},{"name":"inhibition of interleukin-22 production","type":"narrow"},{"name":"negative regulation of IL-22 production","type":"exact"},{"name":"negative regulation of interleukin-22 biosynthetic process","type":"narrow"}],"termid":"GO:0032706"}


id: PBO:0016950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Slt1","termid":"PBO:0016950"}


id: PBO:0091397
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"This gene replaced SPAC823.02 which was previously annotated at this locus in the incorrect frame","termid":"PBO:0091397"}


id: PBO:0029807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions","termid":"PBO:0029807"}


id: GO:0097674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is YLR352W in S. cerevisiae.","definition_xrefs":["GOC:jd","PMID:19882662","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-YLR352W ubiquitin ligase complex","termid":"GO:0097674"}


id: PR:O60127
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pdp3-interacting factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.13","synonyms":[{"name":"Spom972h-ptf2","type":"exact"}],"termid":"PR:O60127"}


id: GO:0070537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein deubiquitination process in which a K63-linked ubiquitin chain, i.e. a polymer of ubiquitin formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is removed from a lysine residue in histone H2A or the variant H2AX.","definition_xrefs":["PMID:19214193","GOC:mah","PMID:19202061"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A K63-linked deubiquitination (obsolete GO:0070537)","termid":"GO:0070537"}


id: GO:0042455
data:
  {"annotated_genes":["SJAG_01859","SJAG_00044","SJAG_03096","SJAG_06634","SJAG_01070","SJAG_03881","SJAG_00134","SJAG_00694"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[117226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[70213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[73855,61981,94086,66911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[73722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any ribonucleoside, a nucleoside in which purine or pyrimidine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside metabolic process","termid":"GO:0009119"},{"relation_name":"is_a","term_name":"nucleoside biosynthetic process","termid":"GO:0009163"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00134":null,"SJAG_00694":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_03096":null,"SJAG_03881":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"ribonucleoside biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"ribonucleoside anabolism","type":"exact"},{"name":"ribonucleoside biosynthesis","type":"exact"},{"name":"ribonucleoside formation","type":"exact"},{"name":"ribonucleoside synthesis","type":"exact"}],"termid":"GO:0042455","terms_by_termid":{"GO:0006166":null,"GO:0006169":null,"GO:0006190":null,"GO:0046086":null,"GO:0046132":null}}


id: MONDO:0010517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the PIH1D3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 36, X-linked","secondary_identifiers":["DOID:0111850","GARD:15280","OMIM:300991","MEDGEN:1393107","UMLS:C4478372"],"synonyms":[{"name":"CILD36","type":"exact"},{"name":"PIH1D3 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 36, X-linked","type":"exact"},{"name":"ciliary dyskinesia, primary, 36, X-linked, X-linked recessive","type":"exact"},{"name":"ciliary dyskinesia, primary, 36, X-linked; CILD36","type":"exact"},{"name":"ciliary dyskinesia, primary, 36, with or without situs inversus","type":"related"},{"name":"primary ciliary dyskinesia caused by mutation in PIH1D3","type":"exact"}],"termid":"MONDO:0010517","xrefs":{"Monarch":{"xref_id":"0010517"}}}


id: MONDO:0850001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital neuronal ceroid lipofuscinosis (CNCL) is a severe form of neuronal ceroid lipofuscinosis (NCL; see this term) with onset at birth characterized by primary microcephaly, neonatal epilepsy, and death in early infancy.","definition_xrefs":["Orphanet:168486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis","termid":"MONDO:0016295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002561","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"congenital neuronal ceroid lipofuscinosis","secondary_identifiers":["GARD:17031","MEDGEN:351189","icd11.foundation:641209188","UMLS:C1864670"],"termid":"MONDO:0850001","xrefs":{"Monarch":{"xref_id":"0850001"}}}


id: PBO:0090507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, DDB1 and CUL4-associated factor Dca7","termid":"PBO:0090507"}


id: MONDO:0002060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intraluminal papillary epithelial neoplasm arising within the ducts. Representative examples are the intraductal breast papilloma and the salivary gland intraductal papilloma.","definition_xrefs":["NCIT:C3785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraductal papilloma","secondary_identifiers":["DOID:1627","UMLS:C0206713","icd11.foundation:288706574","MESH:D018300","MEDGEN:61667","ICDO:8503/0"],"synonyms":[{"name":"duct adenoma","type":"exact"},{"name":"duct papilloma","type":"exact"},{"name":"ductal papilloma","type":"exact"},{"name":"intraductal papilloma","type":"exact"},{"name":"intraductal papilloma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0002060","xrefs":{"Monarch":{"xref_id":"0002060"}}}


id: MONDO:0032631
data:
  {"annotated_genes":["SJAG_01368"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86585],"is_not":false,"summary":null,"term":"MONDO:0032631"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01368":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 27","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112090","OMIM:618248","GARD:18375","MEDGEN:1648481","UMLS:C4748826"],"synonyms":[{"name":"MC1DN27","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 27","type":"related"}],"termid":"MONDO:0032631","terms_by_termid":{"MONDO:0032631":null},"xrefs":{"Monarch":{"xref_id":"0032631"}}}


id: GO:0071227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of oomycetes origin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to molecule of oomycetes origin","termid":"GO:0002240"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"},{"relation_name":"part_of","term_name":"response to fungus","termid":"GO:0009620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to molecule of oomycetes origin","synonyms":[{"name":"cellular response to oomycetes associated molecule","type":"exact"}],"termid":"GO:0071227"}


id: MONDO:0006276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intermediate fibroblastic neoplasm arising from the lung. It is characterized by the presence of spindle-shaped fibroblasts and myofibroblasts, and a chronic inflammatory infiltrate composed of eosinophils, lymphocytes and plasma cells.","definition_xrefs":["NCIT:C39740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung carcinoma","termid":"MONDO:0005138"},{"relation_name":"is_a","term_name":"inflammatory myofibroblastic tumor","termid":"MONDO:0015798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung inflammatory myofibroblastic tumor","secondary_identifiers":["UMLS:C1518038","ICDO:8827/1","EFO:1000333","MEDGEN:273512","ONCOTREE:IMTL"],"synonyms":[{"name":"inflammatory myofibroblastic lung tumor","type":"related"},{"name":"inflammatory myofibroblastic lung tumour","type":"related"},{"name":"lung inflammatory myofibroblastic tumor","type":"exact"}],"termid":"MONDO:0006276","xrefs":{"Monarch":{"xref_id":"0006276"}}}


id: GO:0003039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of oxygen are received and are converted to a molecular signal by chemoreceptors in a carotid body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of reduced oxygen by chemoreceptor signaling","termid":"GO:0003020"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by carotid body chemoreceptor signaling","termid":"GO:0003029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of reduced oxygen by carotid body chemoreceptor signaling","synonyms":[{"name":"detection of reduced oxygen by carotid body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003039"}


id: MONDO:0003640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign wart-like skin lesion of unknown etiology that is usually found in the genital or perianal area and consists of hyperkeratosis and aggregates of foam cell macrophages.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"xanthomatosis","termid":"MONDO:0002615"},{"relation_name":"is_a","term_name":"xanthoma","termid":"MONDO:0005236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"verruciform xanthoma of skin","secondary_identifiers":["DOID:5769","MEDGEN:91076","ICD9:215.9","NCIT:C4478","SCTID:254756007","UMLS:C0346054"],"synonyms":[{"name":"cutaneous verruciform xanthoma","type":"exact"},{"name":"skin verruciform xanthoma","type":"exact"},{"name":"verruciform xanthoma","type":"exact"},{"name":"verruciform xanthoma (morphologic abnormality)","type":"exact"},{"name":"verruciform xanthoma of the skin","type":"exact"}],"termid":"MONDO:0003640","xrefs":{"Monarch":{"xref_id":"0003640"}}}


id: PBO:0017947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supeoxide dismutase, mitochondrial ribosomal protein subunit (predicted)","termid":"PBO:0017947"}


id: PBO:0068186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 493","termid":"PBO:0068186"}


id: PBO:0041993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 39","termid":"PBO:0041993"}


id: PBO:0110398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE4 pseudogene 1","termid":"PBO:0110398"}


id: PATO:0000618
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's having two sides; two-sided.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral","termid":"PATO:0000618"}


id: GO:1990668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane of the ERGIC. This can involve anterograde or retrograde transport vesicles.","definition_xrefs":["GOC:bhm","PMID:24119662","PMID:16038056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane","synonyms":[{"name":"vesicle fusion with ER-Golgi intermediate compartment (ERGIC) membrane","type":"exact"},{"name":"vesicle fusion with ER-Golgi intermediate compartment membrane","type":"exact"},{"name":"vesicle fusion with ERGIC membrane","type":"exact"},{"name":"vesicle fusion with endoplasmic reticulum-Golgi intermediate compartment membrane","type":"exact"}],"termid":"GO:1990668"}


id: PBO:0048998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 6","termid":"PBO:0048998"}


id: PR:000028936
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxiredoxin tpx1 hyperoxidized form in Schizosaccharomyces pombe. The oxidation occurs in under oxidative stress.","definition_xrefs":["PMID:22245228","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxiredoxin tpx1","termid":"PR:000028932"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tpx1/HyperOx(C48)","pombase_gene_id":"SPCC576.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: peroxiredoxin tpx1 hyperoxidized form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-tpx1/HyperOx+","type":"exact"},{"name":"tpx1/HyperOx(C48)","type":"exact"}],"termid":"PR:000028936"}


id: GO:0002407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a dendritic cell in response to an external stimulus.","definition_xrefs":["CL:0000451","ISBN:0781735149","PMID:15814331","GOC:add","PMID:16056255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"dendritic cell migration","termid":"GO:0036336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell chemotaxis","termid":"GO:0002407"}


id: PBO:0065153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRMT5 antisense RNA 1","termid":"PBO:0065153"}


id: PBO:0002935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box/WD repeat protein Pop2","termid":"PBO:0002935"}


id: GO:0051696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of capping protein from the pointed (or minus) end of actin filaments to free the ends for addition, exchange or removal of further actin subunits.","definition_xrefs":["GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament uncapping","termid":"GO:0051695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"pointed-end actin filament uncapping","synonyms":[{"name":"minus end F-actin uncapping","type":"exact"},{"name":"minus end actin filament uncapping","type":"exact"},{"name":"minus-end F-actin uncapping","type":"exact"},{"name":"minus-end actin filament uncapping","type":"exact"},{"name":"pointed end F-actin uncapping","type":"exact"},{"name":"pointed end actin filament uncapping","type":"exact"},{"name":"pointed-end F-actin uncapping","type":"exact"}],"termid":"GO:0051696"}


id: GO:0045071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of viral genome replication.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral genome replication","termid":"GO:0045069"},{"relation_name":"is_a","term_name":"negative regulation of viral process","termid":"GO:0048525"},{"relation_name":"negatively_regulates","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of viral genome replication","synonyms":[{"name":"down regulation of viral genome replication","type":"exact"},{"name":"down-regulation of viral genome replication","type":"exact"},{"name":"downregulation of viral genome replication","type":"exact"},{"name":"inhibition of viral genome replication","type":"narrow"}],"termid":"GO:0045071"}


id: PBO:0005266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome maturation factor Ump1 (predicted)","termid":"PBO:0005266"}


id: MONDO:0014554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete infantile multisystem neurologic-endocrine-pancreatic disease (obsolete MONDO:0014554)","termid":"MONDO:0014554","xrefs":{"Monarch":{"xref_id":"0014554"}}}


id: PBO:0053195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine zipper and EF-hand containing transmembrane protein 1 pseudogene 3","termid":"PBO:0053195"}


id: PBO:0091357
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catabolism of ARginine, after S. cerevisiae","termid":"PBO:0091357"}


id: PBO:0054349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1742","termid":"PBO:0054349"}


id: PBO:0045358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidase 2","termid":"PBO:0045358"}


id: PBO:0080311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 75 pseudogene","termid":"PBO:0080311"}


id: GO:0048490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of synaptic vesicle along axonal microtubules from the cell body to the presynapse.","definition_xrefs":["GOC:jid","GOC:lmg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde axonal transport","termid":"GO:0008089"},{"relation_name":"is_a","term_name":"synaptic vesicle transport along microtubule","termid":"GO:0099517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"anterograde synaptic vesicle transport","synonyms":[{"name":"anterograde axonal transport of synaptic vesicle","type":"exact"}],"termid":"GO:0048490"}


id: PBO:0049109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 166 pseudogene","termid":"PBO:0049109"}


id: GO:0005922
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An assembly of six molecules of connexin, made in the Golgi apparatus and subsequently transported to the plasma membrane, where docking of two connexons on apposed plasma membranes across the extracellular space forms a gap junction.","definition_xrefs":["PMID:11146276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"gap junction","termid":"GO:0005921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"connexin complex","secondary_identifiers":["NIF_Subcellular:sao445019788"],"synonyms":[{"name":"connexon","type":"exact"},{"name":"connexon complex","type":"related"}],"termid":"GO:0005922"}


id: MONDO:0000996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare non-Hodgkin or Hodgkin lymphoma that arises from the prostate gland.","definition_xrefs":["NCIT:C5533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"prostate cancer","termid":"MONDO:0008315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"prostate lymphoma","secondary_identifiers":["DOID:10290","UMLS:C1335512","MEDGEN:235500"],"synonyms":[{"name":"lymphoma of prostate","type":"exact"},{"name":"lymphoma of prostate gland","type":"exact"},{"name":"lymphoma of the prostate","type":"exact"},{"name":"primary prostate lymphoma","type":"exact"},{"name":"prostate gland lymphoma","type":"exact"},{"name":"prostate lymphoma","type":"exact"}],"termid":"MONDO:0000996","xrefs":{"Monarch":{"xref_id":"0000996"}}}


id: MONDO:0042982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder arising from deficiency in the GATA2 with a wide spectrum of phenotypes. Autosomal dominant mutations of GATA2 cause a haploinsufficiency, which, in consequence, cause individuals to develop hematological, immunological, lymphatic, or other presentations. These often progress to severe organ (e.g. lung) failure, opportunistic infections, myelodysplastic syndrome, and/or acute myeloid leukemia. The most common clinical denominator is the propensity for myeloid neoplasia (myelodysplastic syndrome [MDS], myeloproliferative neoplasms [MPN], chronic myelomonocytic leukemia [CMML], acute myeloid leukemia [AML]).","definition_xrefs":["PMID:28637621","PMID:25397911","PMID:25619630","PMID:25624456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"GATA2 deficiency with susceptibility to MDS/AML","secondary_identifiers":["NCIT:C126349"],"synonyms":[{"name":"GATA2 deficiency","type":"exact"},{"name":"GATA2 deficiency with susceptibility to MDS/AML","type":"exact"},{"name":"GATA2 deficiency/MonoMac syndrome","type":"narrow"}],"termid":"MONDO:0042982","xrefs":{"Monarch":{"xref_id":"0042982"}}}


id: GO:0038099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a complex containing a type II activin receptor, a type I activin receptor, and a coreceptor of the EGF-CFC family (e.g. Cripto or Cryptic, in mammals).","definition_xrefs":["PMID:15062104","GOC:signaling","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"nodal signaling pathway","termid":"GO:0038092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"nodal receptor complex assembly","synonyms":[{"name":"ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"nodal receptor complex formation","type":"exact"}],"termid":"GO:0038099"}


id: MONDO:0020536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pigeon-breeder lung disease (obsolete MONDO:0020536)","termid":"MONDO:0020536","xrefs":{"Monarch":{"xref_id":"0020536"}}}


id: PBO:0084888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial threonyl-tRNA synthetase; aminoacylates both the canonical threonine tRNA tT(UGU)Q1 and the unusual threonine tRNA tT(UAG)Q2 in vitro; lacks a typical editing domain, but has pre-transfer editing activity stimulated by the unusual tRNA-Thr","termid":"PBO:0084888"}


id: PBO:0064975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 31, pseudogene","termid":"PBO:0064975"}


id: PBO:0110344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colitis associated IRF1 antisense regulator of intestinal homeostasis","termid":"PBO:0110344"}


id: GO:0009340
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric enzyme, which in most bacterial species is composed of two subunits, ParC and ParE. Functions in chromosome segregation and can relax supercoiled DNA.","definition_xrefs":["PMID:7783632","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex","termid":"GO:0009330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"DNA topoisomerase IV complex","termid":"GO:0009340"}


id: GO:0043752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RTP + adenosylcobinamide = adenosylcobinamide phosphate + RDP (where RTP is either ATP or GTP).","definition_xrefs":["EC:2.7.1.156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"adenosylcobinamide kinase activity","secondary_identifiers":["MetaCyc:2.7.1.156-RXN"],"synonyms":[{"name":"AdoCbi kinase/AdoCbi-phosphate guanylyltransferase","type":"broad"},{"name":"CobU","type":"related"},{"name":"RTP:adenosylcobinamide phosphotransferase activity","type":"exact"},{"name":"adenosylcobinamide kinase (ATP-specific) activity","type":"narrow"},{"name":"adenosylcobinamide kinase (GTP-specific) activity","type":"narrow"},{"name":"adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase","type":"broad"},{"name":"cobinamide kinase activity","type":"exact"}],"termid":"GO:0043752"}


id: PBO:0027938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glucose_consumption","termid":"PBO:0027938"}


id: PBO:0046632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 13","termid":"PBO:0046632"}


id: PBO:0061664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 42","termid":"PBO:0061664"}


id: GO:0051245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of the cellular defense response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular defense response","termid":"GO:0010185"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"negatively_regulates","term_name":"cellular defense response","termid":"GO:0006968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular defense response","synonyms":[{"name":"down regulation of cellular defense response","type":"exact"},{"name":"down-regulation of cellular defense response","type":"exact"},{"name":"downregulation of cellular defense response","type":"exact"},{"name":"inhibition of cellular defense response","type":"narrow"},{"name":"negative regulation of cellular defence response","type":"exact"}],"termid":"GO:0051245"}


id: GO:0035982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A developmental process that arises as an organism progresses toward the end of its lifespan that results in a decline in behavioral activities such as locomotory behavior, and learning or memory.","definition_xrefs":["PMID:20523893","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent behavioral decline (obsolete GO:0035982)","synonyms":[{"name":"age-dependent behavioural decline","type":"exact"},{"name":"age-related behavioral decline","type":"exact"},{"name":"behavioral aging","type":"exact"}],"termid":"GO:0035982"}


id: GO:0097206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which hemolymph is filtered based on size and charge through a nephrocyte filtration barrier formed by the basement membrane and nephrocyte diaphragm.","definition_xrefs":["PMID:18971929","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal filtration","termid":"GO:0097205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephrocyte filtration","termid":"GO:0097206"}


id: PBO:0047679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FLNB antisense RNA 1","termid":"PBO:0047679"}


id: PBO:0050994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFT122 pseudogene 1","termid":"PBO:0050994"}


id: GO:0090107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of high-density lipoprotein particle assembly. High-density lipoprotein particle assembly is the aggregation and arrangement of proteins and lipids to form a high-density lipoprotein particle.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"high-density lipoprotein particle assembly","termid":"GO:0034380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of high-density lipoprotein particle assembly","termid":"GO:0090107"}


id: PBO:0027363
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_telomere-nuclear_envelope_distance_during_mitosis","termid":"PBO:0027363"}


id: PBO:0078982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon TGA) 2-1","termid":"PBO:0078982"}


id: MONDO:1010843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gangliosidosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, non-human animal","termid":"MONDO:1010167"},{"relation_name":"is_a","term_name":"lysosomal storage disease, cattle","termid":"MONDO:1010862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gangliosidosis, cattle","secondary_identifiers":["OMIA:000401-9913"],"termid":"MONDO:1010843","xrefs":{"Monarch":{"xref_id":"1010843"}}}


id: PBO:0079922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urate (hydroxyiso-) hydrolase, pseudogene","termid":"PBO:0079922"}


id: PBO:0062140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 7 pseudogene","termid":"PBO:0062140"}


id: GO:0070141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-A radiation stimulus. UV-A radiation (UV-A light) spans the wavelengths 315 to 400 nm.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV","termid":"GO:0009411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to UV-A","synonyms":[{"name":"response to UV-A light stimulus","type":"exact"},{"name":"response to UV-A radiation stimulus","type":"exact"},{"name":"response to UVA light stimulus","type":"exact"},{"name":"response to UVA radiation stimulus","type":"exact"}],"termid":"GO:0070141"}


id: PBO:0005588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Gaf1","termid":"PBO:0005588"}


id: GO:0047784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + cortisol = CoA + cortisol 21-acetate.","definition_xrefs":["RHEA:17073","EC:2.3.1.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"cortisol O-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02837","MetaCyc:CORTISOL-O-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:cortisol O-acetyltransferase activity","type":"related"},{"name":"corticosteroid acetyltransferase activity","type":"related"},{"name":"corticosteroid-21-O-acetyltransferase activity","type":"related"},{"name":"cortisol acetyltransferase activity","type":"related"}],"termid":"GO:0047784"}


id: PBO:0001844
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.83","termid":"PBO:0001844"}


id: PBO:0087814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tetra-spanning membrane protein found mostly in the late Golgi; non-essential; can suppress some sed5 alleles; may be part of the transport machinery, but precise function is unknown; similar to mammalian syntaxin 5","termid":"PBO:0087814"}


id: PBO:0085573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein interacting with Arl3p; Arl3p is a GTPase of the Ras superfamily involved in vesicle-tethering at the Golgi; putative ortholog of human SCOCO","termid":"PBO:0085573"}


id: PBO:0076271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYBU antisense RNA 1","termid":"PBO:0076271"}


id: GO:0001938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of endothelial cell proliferation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell proliferation","termid":"GO:0001936"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"positively_regulates","term_name":"endothelial cell proliferation","termid":"GO:0001935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell proliferation","synonyms":[{"name":"activation of endothelial cell proliferation","type":"narrow"},{"name":"stimulation of endothelial cell proliferation","type":"narrow"},{"name":"up regulation of endothelial cell proliferation","type":"exact"},{"name":"up-regulation of endothelial cell proliferation","type":"exact"},{"name":"upregulation of endothelial cell proliferation","type":"exact"}],"termid":"GO:0001938"}


id: MONDO:0003664
data:
  {"annotated_genes":["SJAG_00839","SJAG_04495","SJAG_02297","SJAG_01077","SJAG_04881","SJAG_04731","SJAG_02796","SJAG_02539","SJAG_00988","SJAG_03153","SJAG_01162","SJAG_03497","SJAG_05283","SJAG_00605","SJAG_04334","SJAG_04192","SJAG_00846","SJAG_01183","SJAG_00930","SJAG_02009","SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010480"},{"annotations":[85790,85791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009134"},{"annotations":[85834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007109"},{"annotations":[86725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008494"},{"annotations":[85795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009902"},{"annotations":[85637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012204"},{"annotations":[86240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009259"},{"annotations":[86544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"},{"annotations":[86013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[87400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009113"},{"annotations":[86516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013275"},{"annotations":[87192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019531"},{"annotations":[87661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859172"},{"annotations":[85805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012981"},{"annotations":[86798,86799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009340"},{"annotations":[86737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008493"},{"annotations":[85784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012992"},{"annotations":[87240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[86294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"},{"annotations":[85934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009950"},{"annotations":[85537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012700"},{"annotations":[87529],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0019107"},{"annotations":[85975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008165"},{"annotations":[86125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","definition":"Anemia resulting from the premature destruction of the peripheral blood red cells. It may be congenital or it may be caused by infections, medications, or malignancies.","definition_xrefs":["NCIT:C34376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normocytic anemia","termid":"MONDO:0004139"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00605":null,"SJAG_00839":null,"SJAG_00846":null,"SJAG_00930":null,"SJAG_00988":null,"SJAG_01077":null,"SJAG_01162":null,"SJAG_01183":null,"SJAG_01351":null,"SJAG_02009":null,"SJAG_02297":null,"SJAG_02539":null,"SJAG_02796":null,"SJAG_03153":null,"SJAG_03497":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04731":null,"SJAG_04881":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"hemolytic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D000743","ICD10CM:D55-D59","NANDO:2200636","DOID:583","MEDGEN:1916","SCTID:61261009","UMLS:C0002878"],"synonyms":[{"name":"anaemia hemolytic","type":"exact"},{"name":"anemia hemolytic","type":"exact"},{"name":"anemia, hemolytic","type":"exact"},{"name":"hemolytic anemia","type":"exact"}],"termid":"MONDO:0003664","terms_by_termid":{"MONDO:0007109":null,"MONDO:0008165":null,"MONDO:0008493":null,"MONDO:0008494":null,"MONDO:0009113":null,"MONDO:0009134":null,"MONDO:0009259":null,"MONDO:0009284":null,"MONDO:0009295":null,"MONDO:0009340":null,"MONDO:0009902":null,"MONDO:0009950":null,"MONDO:0010438":null,"MONDO:0010480":null,"MONDO:0012204":null,"MONDO:0012700":null,"MONDO:0012981":null,"MONDO:0012992":null,"MONDO:0013275":null,"MONDO:0014166":null,"MONDO:0014221":null,"MONDO:0019107":null,"MONDO:0019531":null,"MONDO:0859172":null},"xrefs":{"Monarch":{"xref_id":"0003664"}}}


id: FYPO:0002151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell","termid":"FYPO:0000049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable spore","secondary_identifiers":["FYPO:0000306"],"synonyms":[{"name":"abolished spore germination","type":"related"},{"name":"decreased spore viability","type":"related"},{"name":"lethal in spore","type":"exact"},{"name":"spore germination abolished","type":"related"}],"termid":"FYPO:0002151"}


id: GO:0070933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the removal of one or more acetyl groups.","definition_xrefs":["GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4 deacetylation (obsolete GO:0070933)","termid":"GO:0070933"}


id: FYPO:0005668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cyclic AMP (cAMP). Cells stop growing (and may die) at a concentration of cAMP that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to phosphate (Pi)","termid":"FYPO:0008229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to cAMP","synonyms":[{"name":"hypersensitive to cAMP","type":"exact"},{"name":"sensitive to cAMP during mitotic cell cycle","type":"related"},{"name":"sensitive to cAMP during vegetative growth","type":"exact"},{"name":"sensitive to cyclic AMP","type":"exact"}],"termid":"FYPO:0005668"}


id: GO:0075272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of zygosporangium development, a process in which a fruiting body called zygosporangium is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"zygosporangium development","termid":"GO:0075271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of zygosporangium development","termid":"GO:0075272"}


id: PBO:0080031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 17","termid":"PBO:0080031"}


id: FYPO:0000719
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119951],"is_not":false,"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of fatty acid synthase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":1,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal fatty acid synthase activity","references_by_uniquename":{"PMID:31956022":null},"single_locus_annotated_genes":["SJAG_01458"],"single_locus_genotype_uniquenames":["acb1delta"],"synonyms":[{"name":"normal FAS activity","type":"exact"}],"termid":"FYPO:0000719","terms_by_termid":{"FYECO:0000126":null,"FYPO:0000719":null}}


id: MONDO:0014820
data:
  {"annotated_genes":["SJAG_02656"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86162],"is_not":false,"summary":null,"term":"MONDO:0014820"}]},"cv_name":"mondo","definition":"Any mitochondrial DNA depletion syndrome in which the cause of the disease is a mutation in the OPA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 14 (cardioencephalomyopathic type)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616896","DOID:0080336","MEDGEN:903789","UMLS:C4225163"],"synonyms":[{"name":"MTDPS14","type":"exact"},{"name":"OPA1 mitochondrial DNA depletion syndrome","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 14 (cardioencephalomyopathic type)","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 14 (cardioencephalomyopathic type); MTDPS14","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 14 (encephalocardiomyopathic type)","type":"exact"},{"name":"mitochondrial DNA depletion syndrome caused by mutation in OPA1","type":"exact"}],"termid":"MONDO:0014820","terms_by_termid":{"MONDO:0014820":null},"xrefs":{"Monarch":{"xref_id":"0014820"}}}


id: GO:0060852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a cell to a specific fate and contributes to a cell adopting a venous endothelial cell fate.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in venous endothelial cell fate commitment (obsolete GO:0060852)","termid":"GO:0060852"}


id: PBO:0003405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein intermediate chain Dic1","termid":"PBO:0003405"}


id: RO:0008503
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of parasite of in which a parasite steals resources from another organism, usually food or nest material","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kleptoparasite_of","termid":"RO:0008503"}


id: GO:1902261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:rl","PMID:11299204"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of delayed rectifier potassium channel activity (obsolete GO:1902261)","synonyms":[{"name":"activation of delayed rectifier potassium channel activity","type":"narrow"},{"name":"up regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"upregulation of delayed rectifier potassium channel activity","type":"exact"}],"termid":"GO:1902261"}


id: MONDO:0001200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"High blood pressure caused by an underlying medical condition.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertensive disorder","termid":"MONDO:0005044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary hypertension","secondary_identifiers":["MEDGEN:57609","SCTID:31992008","icd11.foundation:1331849426","DOID:11130","ICD9:405.9","ICD9:405.99","ICD9:405","EFO:1002034","UMLS:C0155616"],"termid":"MONDO:0001200","xrefs":{"Monarch":{"xref_id":"0001200"}}}


id: GO:0030878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the thyroid gland over time, from its formation to the mature structure. The thyroid gland is an endoderm-derived gland that produces thyroid hormone.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"endocrine system development","termid":"GO:0035270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thyroid gland development","termid":"GO:0030878"}


id: MONDO:0006278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign papillary neoplasm that arises endobronchially. It is classified as squamous cell, glandular, or mixed squamous cell and glandular papilloma. Patients usually present with signs and symptoms of bronchial obstruction.","definition_xrefs":["NCIT:C8295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papilloma","termid":"MONDO:0002363"},{"relation_name":"is_a","term_name":"lung benign neoplasm","termid":"MONDO:0002732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung papilloma","secondary_identifiers":["UMLS:C5397991","MEDGEN:1709750","EFO:1000335"],"synonyms":[{"name":"lung papilloma","type":"exact"},{"name":"papilloma of respiratory tract","type":"exact"},{"name":"papilloma of the respiratory tract","type":"exact"},{"name":"respiratory tract papilloma","type":"exact"}],"termid":"MONDO:0006278","xrefs":{"Monarch":{"xref_id":"0006278"}}}


id: PBO:0016523
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Twin HorseTail","termid":"PBO:0016523"}


id: GO:0045950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that inhibits or decreases the rate of DNA recombination during mitosis.","definition_xrefs":["GOC:go_curators","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic recombination","termid":"GO:0000019"},{"relation_name":"is_a","term_name":"negative regulation of DNA recombination","termid":"GO:0045910"},{"relation_name":"negatively_regulates","term_name":"mitotic recombination","termid":"GO:0006312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic recombination","synonyms":[{"name":"down regulation of mitotic recombination","type":"exact"},{"name":"down-regulation of mitotic recombination","type":"exact"},{"name":"downregulation of mitotic recombination","type":"exact"},{"name":"inhibition of mitotic recombination","type":"narrow"},{"name":"negative regulation of recombination within rDNA repeats","type":"narrow"}],"termid":"GO:0045950"}


id: GO:1990073
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell wall part that is the part of a wall of a vessel member and bears one or more openings (perforations).","definition_xrefs":["GOC:PO_curators","ISBN:0471245194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell wall","termid":"GO:0005618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"perforation plate","termid":"GO:1990073"}


id: MONDO:0015871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually unilateral, benign and well circumscribed biphasic neoplasm that arises from the breast. It usually affects middle-aged women. It is characterized by the presence of a double layer of epithelial cells that are arranged in clefts, surrounded by a cellular, monomorphic spindle cell mesenchymal component. Mitoses are rare. Necrotic changes may be present in large tumors.","definition_xrefs":["NCIT:C5196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"},{"relation_name":"is_a","term_name":"breast phyllodes tumor","termid":"MONDO:0021047"},{"relation_name":"is_a","term_name":"benign phyllodes tumor","termid":"MONDO:0037002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign breast phyllodes tumor","secondary_identifiers":["ONCOTREE:BPT","SCTID:720344007","Orphanet:180261","DOID:1631","MEDGEN:231438","icd11.foundation:827143668","MedDRA:10011813","UMLS:C1332533"],"synonyms":[{"name":"BPT","type":"related"},{"name":"benign breast phyllodes tumor","type":"exact"},{"name":"benign cystosarcoma phyllodes","type":"related"},{"name":"benign phyllodes neoplasm","type":"broad"},{"name":"benign phyllodes neoplasm of breast","type":"exact"},{"name":"benign phyllodes neoplasm of the breast","type":"exact"},{"name":"benign phyllodes tumor of breast","type":"exact"},{"name":"benign phyllodes tumor of the breast","type":"exact"},{"name":"benign phyllodes tumour of breast","type":"exact"},{"name":"benign phyllodes tumour of the breast","type":"exact"},{"name":"breast benign phyllodes neoplasm","type":"exact"},{"name":"breast phyllodes tumor, benign","type":"exact"},{"name":"cystosarcoma phyllode","type":"related"},{"name":"cystosarcoma phyllode of the breast","type":"exact"},{"name":"cystosarcoma phyllodes","type":"related"},{"name":"cystosarcoma phyllodes NOS (morphologic abnormality)","type":"related"},{"name":"cystosarcoma phylloide","type":"related"},{"name":"cystosarcoma phylloide of the breast","type":"exact"},{"name":"phyllode tumor of the breast","type":"related"},{"name":"phyllode tumour of the breast","type":"related"},{"name":"phyllodes neoplasm","type":"broad"},{"name":"phyllodes tumor, benign (morphologic abnormality)","type":"broad"},{"name":"phylloide tumor of the breast","type":"exact"},{"name":"phylloide tumour of the breast","type":"exact"}],"termid":"MONDO:0015871","xrefs":{"Monarch":{"xref_id":"0015871"}}}


id: MONDO:1012086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tetragametic chimerism, non-human animal","termid":"MONDO:1011918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism, sheep","secondary_identifiers":["OMIA:000393-9940"],"termid":"MONDO:1012086","xrefs":{"Monarch":{"xref_id":"1012086"}}}


id: PBO:0004806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose methyltransferase (predicted)","termid":"PBO:0004806"}


id: PBO:0078169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta diversity 2","termid":"PBO:0078169"}


id: GO:0071738
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgD isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgD immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["GOC:add","ISBN:0781765196","PMID:11282392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IgD immunoglobulin complex","termid":"GO:0071738"}


id: PBO:0063727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 2","termid":"PBO:0063727"}


id: GO:0120334
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The radial spoke of each group of radial spokes, whether grouped as triplets or doublets, that is immediately distal to radial spoke 1 (RS1). Radial spoke 2 (RS2), similarly to RS1, is comprised of four domains: 1) a very short base anchored to the A microtubule, 2) an elongaged stalk, 3) a bifurcated neck, and 4) an orthogonal head. The base of RS2 is connected to the tail of the inner dynein arm c.","definition_xrefs":["PMID:22754630","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke","termid":"GO:0001534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"radial spoke 2","synonyms":[{"name":"RS2","type":"related"}],"termid":"GO:0120334"}


id: GO:0071101
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to the cell adhesion molecule JAM2.","definition_xrefs":["PMID:12070135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha4-beta1 integrin-JAM2 complex","synonyms":[{"name":"ITGA4-ITGB1-JAM2 complex","type":"narrow"}],"termid":"GO:0071101"}


id: PBO:0070536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 2","termid":"PBO:0070536"}


id: MONDO:0003958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immature teratoma that arises from the central nervous system and occurs during childhood.","definition_xrefs":["NCIT:C27405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system immature teratoma","termid":"MONDO:0003735"},{"relation_name":"is_a","term_name":"childhood central nervous system germ cell tumor","termid":"MONDO:0003750"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood central nervous system immature teratoma","secondary_identifiers":["UMLS:C1332954","DOID:6654","MEDGEN:232344"],"synonyms":[{"name":"central nervous system immature teratoma of childhood","type":"exact"},{"name":"childhood central nervous system immature teratoma","type":"exact"},{"name":"paediatric central nervous system immature teratoma","type":"exact"},{"name":"pediatric central nervous system immature teratoma","type":"exact"}],"termid":"MONDO:0003958","xrefs":{"Monarch":{"xref_id":"0003958"}}}


id: FYPO:0005077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell becomes elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah","PMID:17179073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"elongated cell during glucose starvation","synonyms":[{"name":"cell morphology, elongated cell during glucose starvation","type":"exact"},{"name":"elongated cell during glucose depletion","type":"exact"},{"name":"elongated cell during glucose deprivation","type":"exact"},{"name":"long cell during glucose starvation","type":"exact"}],"termid":"FYPO:0005077"}


id: PBO:0039715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme catalytic subunit 1","termid":"PBO:0039715"}


id: PBO:0034317
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_by_via_type_II_bouton","termid":"PBO:0034317"}


id: FYPO:0001617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-isoleucine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular isoleucine level","synonyms":[{"name":"decreased cellular L-isoleucine level","type":"exact"},{"name":"decreased cellular isoleucine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular isoleucine level during vegetative growth","type":"exact"},{"name":"decreased level of isoleucine in cell","type":"exact"},{"name":"reduced cellular isoleucine level","type":"exact"},{"name":"reduced level of isoleucine in cell","type":"exact"}],"termid":"FYPO:0001617"}


id: PR:Q9UTL9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC144.05 gene.","definition_xrefs":["UniProtKB:Q9UTL9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ATP-dependent helicase C144.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC144.05","synonyms":[{"name":"Spom972h-SPAC144.05","type":"exact"}],"termid":"PR:Q9UTL9"}


id: MONDO:0018160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited malignant tumor that originates in the nuclear layer of the retina. A predisposition to retinoblastoma has been associated with 13q14 cytogenetic abnormalities. Patients with the inherited form appear to be at increased risk for secondary nonocular malignancies such as osteosarcoma, malignant fibrous histiocytoma, and fibrosarcoma.","definition_xrefs":["NCIT:C8495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"hereditary retinoblastoma","secondary_identifiers":["OMIM:180200","UMLS:C0751483","Orphanet:357027","GARD:17544","MEDGEN:155869","DOID:4648"],"synonyms":[{"name":"RB1","type":"exact"},{"name":"familial retinoblastoma","type":"exact"},{"name":"hereditary retinoblastoma","type":"exact"},{"name":"retinoblastoma, autosomal dominant, somatic mutation","type":"exact"},{"name":"retinoblastoma, trilateral, autosomal dominant, somatic mutation","type":"exact"}],"termid":"MONDO:0018160","xrefs":{"Monarch":{"xref_id":"0018160"}}}


id: PBO:0058240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4527 host gene","termid":"PBO:0058240"}


id: PBO:0076115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 18 pseudogene 1","termid":"PBO:0076115"}


id: FYPO:0008153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at the silent mating-type cassette is abolished.","direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to heterochromatin at  silent mating-type cassette during vegetative growth","synonyms":[{"name":"abolished protein localization to mating-type locus heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0008153"}


id: PBO:0051636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner membrane mitochondrial protein pseudogene 1","termid":"PBO:0051636"}


id: PR:O60061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichyl-phosphate beta-glucosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10859:SF42","PRO:DNx","OMA:SCHPO03989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate beta-glucosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC56F2.10c","secondary_identifiers":["UniProtKB:O60061"],"synonyms":[{"name":"DolP-glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALG5","type":"exact"},{"name":"asparagine-linked glycosylation protein 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60061"}


id: GO:0007346
data:
  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id: PBO:0029945
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_tapered_vegetative_cell_population_(obsolete_FYPO:0002292)","termid":"PBO:0029945"}


id: PBO:0082585
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin-binding ATPase that regulates histone gene expression; only bromodomain-containing AAA-ATPase in yeast; bromodomain interacts with N-terminal tail of histone H3; relocalizes to cytosol in response to hypoxia; human ortholog ANCCA is coactivator of both estrogen and androgen receptors, and increased expression of ANCCA is associated with breast and prostate cancers with poor prognoses","termid":"PBO:0082585"}


id: PBO:0043136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 4","termid":"PBO:0043136"}


id: PBO:0028108
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_inositol_pentakisphosphate_level","termid":"PBO:0028108"}


id: PBO:0051290
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-8","termid":"PBO:0051290"}


id: GO:1905413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dense core granule exocytosis.","definition_xrefs":["GO_REF:0000058","GOC:PARL","PMID:18468511","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"},{"relation_name":"regulates","term_name":"dense core granule exocytosis","termid":"GO:1990504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"regulation of dense core granule exocytosis","synonyms":[{"name":"regulation of dense core vesicle exocytosis","type":"exact"}],"termid":"GO:1905413"}


id: PR:O14093
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 54 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12965:SF0","OMA:SCHPO01639","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 54 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.10","secondary_identifiers":["UniProtKB:O14093"],"synonyms":[{"name":"Spom972h-VPS54","type":"exact"}],"termid":"PR:O14093"}


id: PBO:0082719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Paf1p complex; binds to and modulates the activity of RNA polymerases I and II; required for expression of certain genes, modification of some histones, and telomere maintenance; involved in transcription elongation as demonstrated by the G-less-based run-on (GLRO) assay; protein abundance increases in response to DNA replication stress; human homolog, parafibromin, is a tumour suppressor linked to breast, renal and gastric cancers","termid":"PBO:0082719"}


id: PBO:0059250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L19","termid":"PBO:0059250"}


id: MONDO:0009858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pfeiffer-Palm-Teller syndrome is a very rare dysmorphic syndrome described in two sibs and characterized by a short stature, unique facies, enamel hypoplasia, progressive joint stiffness, high-pitched voice, cup-shaped ears, and narrow palpebral fissures with epicanthal folds, and intellectual deficit.","definition_xrefs":["Orphanet:2871"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pfeiffer-Palm-Teller syndrome","secondary_identifiers":["UMLS:C1849929","GARD:4305","MESH:C537889","MEDGEN:342366","SCTID:726672000","OMIM:261560"],"synonyms":[{"name":"PPT syndrome","type":"related"},{"name":"Pfeiffer Palm Teller syndrome","type":"related"},{"name":"Pfeiffer-Palm-Teller syndrome","type":"exact"},{"name":"short stature unique facies enamel hypoplasia progressive joint stiffness and high-pitched voice","type":"related"},{"name":"short stature, unique facies, enamel hypoplasia, progressive Joint stiffness, and high-pitched voice","type":"related"}],"termid":"MONDO:0009858","xrefs":{"Monarch":{"xref_id":"0009858"}}}


id: MONDO:0018477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"inborn disorder of bilirubin metabolism","termid":"MONDO:0017755"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"bilirubin encephalopathy","secondary_identifiers":["MEDGEN:44018","DOID:2382","NCIT:C84799","Orphanet:415286","SCTID:50143004","UMLS:C0022610","MedDRA:10023376","GARD:6830","MESH:D007647"],"synonyms":[{"name":"bilirubin encephalopathy","type":"exact"},{"name":"hyperbilirubinemic encephalopathy","type":"related"},{"name":"kernicterus","type":"exact"},{"name":"kernicterus spectrum disorder","type":"related"}],"termid":"MONDO:0018477","xrefs":{"Monarch":{"xref_id":"0018477"}}}


id: PR:Q9P7Q5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1834.10c gene.","definition_xrefs":["UniProtKB:Q9P7Q5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1834.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.10c","synonyms":[{"name":"Spom972h-SPAC1834.10c","type":"exact"}],"termid":"PR:Q9P7Q5"}


id: SO:0000844
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence which is a promoter for RNA polymerase II.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000844 RNApol_II_promoter_region (obsolete SO:0000844)","termid":"SO:0000844"}


id: FYPO:0001005
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which DNA is broken into small fragments when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah","PMID:19366728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented DNA","termid":"FYPO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"fragmented DNA during nitrogen starvation","synonyms":[{"name":"DNA fragmentation during nitrogen starvation","type":"exact"},{"name":"fragmented DNA during nitrogen depletion","type":"exact"},{"name":"fragmented DNA during nitrogen deprivation","type":"exact"},{"name":"fragmented nucleus during nitrogen starvation","type":"related"}],"termid":"FYPO:0001005"}


id: GO:1900070
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular hyperosmotic salinity response.","definition_xrefs":["PMID:16278455","GOC:TermGenie","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular hyperosmotic salinity response","termid":"GO:1900069"},{"relation_name":"is_a","term_name":"negative regulation of response to salt stress","termid":"GO:1901001"},{"relation_name":"negatively_regulates","term_name":"cellular hyperosmotic salinity response","termid":"GO:0071475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular hyperosmotic salinity response","synonyms":[{"name":"down regulation of cellular hyperosmotic salinity response","type":"related"},{"name":"down regulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"down-regulation of cellular hyperosmotic salinity response","type":"related"},{"name":"down-regulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"downregulation of cellular hyperosmotic salinity response","type":"related"},{"name":"downregulation of cellular response to hyperosmotic salt stress","type":"exact"},{"name":"inhibition of cellular hyperosmotic salinity response","type":"narrow"},{"name":"inhibition of cellular response to hyperosmotic salt stress","type":"narrow"},{"name":"negative regulation of cellular response to hyperosmotic salt stress","type":"exact"}],"termid":"GO:1900070"}


id: MONDO:0003420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An epithelial, usually multiloculated neoplasm arising from the intrahepatic or extrahepatic bile ducts. It occurs predominantly in females. Signs and symptoms include abdominal mass, abdominal pain, and jaundice. Morphologically, the cystic spaces are lined by columnar epithelium and contain mucinous or serous fluid.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystadenoma","termid":"MONDO:0002369"},{"relation_name":"is_a","term_name":"bile duct adenoma","termid":"MONDO:0006108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"bile duct cystadenoma","secondary_identifiers":["NCIT:C4129","DOID:5384","MEDGEN:90756","ICDO:8161/0","UMLS:C0334285"],"synonyms":[{"name":"bile duct cystadenoma","type":"exact"},{"name":"bile duct cystadenoma (morphologic abnormality)","type":"exact"},{"name":"bile duct mucinous cystic neoplasm","type":"exact"},{"name":"cystadenoma of bile duct","type":"exact"},{"name":"cystadenoma of the bile duct","type":"exact"}],"termid":"MONDO:0003420","xrefs":{"Monarch":{"xref_id":"0003420"}}}


id: PBO:0056683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternally expressed 3","termid":"PBO:0056683"}


id: GO:0032417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of a sodium:hydrogen antiporter, which catalyzes the reaction: Na+(out) + H+(in) = Na+(in) + H+(out).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transporter activity","termid":"GO:2000651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of sodium:proton antiporter activity","synonyms":[{"name":"activation of sodium:hydrogen antiporter activity","type":"narrow"},{"name":"positive regulation of sodium:hydrogen antiporter activity","type":"exact"},{"name":"stimulation of sodium:hydrogen antiporter activity","type":"narrow"},{"name":"up regulation of sodium:hydrogen antiporter activity","type":"exact"},{"name":"up-regulation of sodium:hydrogen antiporter activity","type":"exact"},{"name":"upregulation of sodium:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0032417"}


id: PBO:0001850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c1 heme lyase (predicted)","termid":"PBO:0001850"}


id: PATO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000055 relative number (obsolete PATO:0000055)","termid":"PATO:0000055"}


id: PBO:0064311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal phosphate binding protein","termid":"PBO:0064311"}


id: PBO:0074396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 6","termid":"PBO:0074396"}


id: PBO:0064843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 12C","termid":"PBO:0064843"}


id: PBO:0117189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGR3 and PEBP4 antisense RNA 1","termid":"PBO:0117189"}


id: PBO:0027171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_during_mitosis","termid":"PBO:0027171"}


id: GO:0001837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["PMID:14701881","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial to mesenchymal transition","secondary_identifiers":["Reactome:R-HSA-9758919"],"synonyms":[{"name":"EMT","type":"exact"},{"name":"epithelial-mesenchymal transition","type":"exact"},{"name":"mesenchymal cell differentiation from epithelial cell","type":"exact"}],"termid":"GO:0001837"}


id: PBO:0066515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of cell cycle","termid":"PBO:0066515"}


id: GO:0033769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 2-dimethylallyl-(6aS,11aS)-3,6a,9-trihydroxypterocarpan + NADPH + H+ + O2 = glyceollin II or glyceollin III + NADP+ + 2 H2O, and 4-dimethylallyl-(6aS,11aS)-3,6a,9-trihydroxypterocarpan + NADPH + H+ + O2 = glyceollin I + NADP+ + 2 H2O.","definition_xrefs":["EC:1.14.14.135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glyceollin synthase activity","synonyms":[{"name":"dimethylallyl-3,6a,9-trihydroxypterocarpan cyclase activity","type":"exact"}],"termid":"GO:0033769"}


id: PBO:0051257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-38-1 (pseudogene)","termid":"PBO:0051257"}


id: PR:Q8WZJ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A C-1-tetrahydrofolate synthase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02532","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-1-tetrahydrofolate synthase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.16","secondary_identifiers":["UniProtKB:Q8WZJ7"],"synonyms":[{"name":"C1-THF synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MTHFD1","type":"exact"}],"termid":"PR:Q8WZJ7"}


id: GO:0005138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-6 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-6 receptor binding","synonyms":[{"name":"IL-6","type":"narrow"},{"name":"interleukin-6 receptor ligand","type":"narrow"}],"termid":"GO:0005138"}


id: PBO:0064350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLXNB3 antisense RNA 1","termid":"PBO:0064350"}


id: PBO:0077185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLR8 antisense RNA 1","termid":"PBO:0077185"}


id: PBO:0041994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC39 antisense RNA 1","termid":"PBO:0041994"}


id: GO:0032481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of type I interferon production. Type I interferons include the interferon-alpha, beta, delta, episilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of type I interferon production","termid":"GO:0032479"},{"relation_name":"positively_regulates","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of type I interferon production","secondary_identifiers":["Reactome:R-HSA-1834949"],"synonyms":[{"name":"activation of type I interferon production","type":"narrow"},{"name":"positive regulation of type I IFN production","type":"exact"},{"name":"stimulation of type I interferon production","type":"narrow"},{"name":"up regulation of type I interferon production","type":"exact"},{"name":"up-regulation of type I interferon production","type":"exact"},{"name":"upregulation of type I interferon production","type":"exact"}],"termid":"GO:0032481"}


id: SO:0001898
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat region which is part of the regional centromere outer repeat region.","definition_xrefs":["PMID:16407326","SO:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromeric_repeat","termid":"SO:0001797"},{"relation_name":"part_of","term_name":"regional_centromere_outer_repeat_region","termid":"SO:0001799"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dg_repeat","synonyms":[{"name":"dg repeat","type":"exact"}],"termid":"SO:0001898"}


id: GO:0071199
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the peptidase-related protein DPP10 associated with the channel via interaction with the Kv alpha subunit 4.1.","definition_xrefs":["PMID:15911355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"Kv4.1-DPP10 channel complex","secondary_identifiers":["CORUM:601"],"synonyms":[{"name":"Kv4.1-DPPY channel complex","type":"exact"}],"termid":"GO:0071199"}


id: GO:0042313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process resulting in the inhibition or termination of the activity of protein kinase C.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"protein kinase C deactivation","synonyms":[{"name":"PKC deactivation","type":"exact"}],"termid":"GO:0042313"}


id: FYPO:0005677
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is lower than normal during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:27151298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased number of Rad52 foci during vegetative growth","termid":"FYPO:0004516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased number of Rad52 foci during mitotic S phase","synonyms":[{"name":"decreased number of Rad22 foci during mitotic S phase","type":"exact"},{"name":"decreased number of Rad52 foci during S phase of mitotic cell cycle","type":"exact"},{"name":"decreased number of Rad52 foci during mitotic S phase during vegetative growth","type":"exact"},{"name":"reduced number of Rad52 foci during mitotic S phase","type":"exact"}],"termid":"FYPO:0005677"}


id: MONDO:0012300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 6","secondary_identifiers":["UMLS:C1836005","MEDGEN:322797","GARD:15462","MESH:C563699","OMIM:609558"],"synonyms":[{"name":"HPC6","type":"related"},{"name":"prostate cancer, hereditary, 6","type":"exact"},{"name":"prostate cancer, hereditary, type 6","type":"exact"},{"name":"prostate cancer, susceptibility to","type":"related"}],"termid":"MONDO:0012300","xrefs":{"Monarch":{"xref_id":"0012300"}}}


id: MONDO:0014681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any thyroid cancer, nonmedullary in which the cause of the disease is a mutation in the FOXE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland follicular carcinoma","termid":"MONDO:0005034"},{"relation_name":"is_a","term_name":"familial papillary or follicular thyroid carcinoma","termid":"MONDO:0017895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid cancer, nonmedullary, 4","secondary_identifiers":["MEDGEN:907624","UMLS:C4225293","OMIM:616534","GARD:16132"],"synonyms":[{"name":"FOXE1 thyroid cancer, nonmedullary","type":"exact"},{"name":"NMTC4","type":"related"},{"name":"thyroid cancer, nonmedullary caused by mutation in FOXE1","type":"exact"},{"name":"thyroid cancer, nonmedullary, 4","type":"exact"},{"name":"thyroid cancer, nonmedullary, type 4","type":"exact"}],"termid":"MONDO:0014681","xrefs":{"Monarch":{"xref_id":"0014681"}}}


id: PBO:0078108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 14","termid":"PBO:0078108"}


id: PBO:0086410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GPI-anchored aspartic protease; member of the yapsin family of proteases involved in cell wall growth and maintenance","termid":"PBO:0086410"}


id: MONDO:0013094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glioma susceptibility","termid":"MONDO:0100242"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glioma susceptibility 5","secondary_identifiers":["OMIM:613030","UMLS:C2751640","MEDGEN:414430"],"synonyms":[{"name":"GLM5","type":"exact"},{"name":"glioma susceptibility 5","type":"exact"}],"termid":"MONDO:0013094","xrefs":{"Monarch":{"xref_id":"0013094"}}}


id: PBO:0051884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITCH antisense RNA 1","termid":"PBO:0051884"}


id: PBO:0074714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 75","termid":"PBO:0074714"}


id: MONDO:0005071
data:
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